Query 029790
Match_columns 188
No_of_seqs 140 out of 1005
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 05:22:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029790.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029790hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2f7f_A Nicotinate phosphoribos 100.0 4.9E-45 1.7E-49 334.7 17.4 176 2-180 297-478 (494)
2 2i14_A Nicotinate-nucleotide p 99.9 8.5E-25 2.9E-29 195.8 9.8 116 2-152 279-394 (395)
3 2i1o_A Nicotinate phosphoribos 99.9 3.2E-24 1.1E-28 192.2 10.0 115 2-151 281-396 (398)
4 3dhf_A Nicotinamide phosphorib 99.9 1.7E-24 5.9E-29 197.9 6.9 110 5-143 365-481 (484)
5 1yir_A Naprtase 2, nicotinate 99.7 2E-19 6.8E-24 161.6 1.3 68 2-69 324-396 (408)
6 2im5_A Nicotinate phosphoribos 99.7 4.6E-19 1.6E-23 158.6 1.7 68 2-70 310-387 (394)
7 1ybe_A Naprtase, nicotinate ph 99.7 2.5E-19 8.7E-24 162.6 -0.2 69 2-71 349-428 (449)
8 1vlp_A Naprtase, nicotinate ph 99.6 5.8E-17 2E-21 146.9 0.6 66 2-68 344-420 (441)
9 3os4_A Naprtase, nicotinate ph 99.6 3E-16 1E-20 140.9 4.9 62 3-64 320-386 (407)
10 4hl7_A Naprtase, nicotinate ph 99.6 3.5E-16 1.2E-20 141.8 4.4 57 3-59 330-397 (446)
11 1w32_A Endo-1,4-beta-xylanase 44.8 14 0.0005 31.5 3.2 41 3-43 196-249 (348)
12 3niy_A Endo-1,4-beta-xylanase; 44.6 15 0.00052 31.5 3.3 25 3-27 207-231 (341)
13 3emz_A Xylanase, endo-1,4-beta 42.8 7.2 0.00025 33.4 0.9 41 3-43 191-242 (331)
14 4f8x_A Endo-1,4-beta-xylanase; 39.9 11 0.00036 32.4 1.5 25 3-27 195-219 (335)
15 1v0l_A Endo-1,4-beta-xylanase 38.5 12 0.00042 31.5 1.7 26 3-28 187-212 (313)
16 1n82_A Xylanase, intra-cellula 36.4 13 0.00044 31.5 1.5 25 3-27 192-216 (331)
17 1r85_A Endo-1,4-beta-xylanase; 36.0 13 0.00045 32.3 1.5 26 3-28 216-241 (379)
18 1nq6_A XYS1; glycoside hydrola 33.5 17 0.00057 30.1 1.7 26 3-28 186-211 (302)
19 3u7b_A Endo-1,4-beta-xylanase; 31.9 16 0.00054 31.1 1.4 24 3-26 188-211 (327)
20 2uwf_A Endoxylanase, alkaline 31.1 17 0.00059 31.2 1.5 25 3-27 206-230 (356)
21 1ta3_B Endo-1,4-beta-xylanase; 30.7 22 0.00075 29.8 2.0 26 3-28 188-213 (303)
22 1ur1_A Endoxylanase; hydrolase 29.6 19 0.00065 31.2 1.5 25 3-27 213-237 (378)
23 1i1w_A Endo-1,4-beta-xylanase; 29.2 22 0.00074 29.7 1.7 25 3-27 189-213 (303)
24 2d1z_A Endo-1,4-beta-D-xylanas 28.9 22 0.00074 31.0 1.7 25 4-28 188-212 (436)
25 2dep_A Xylanase B, thermostabl 27.3 22 0.00076 30.4 1.5 25 3-27 205-229 (356)
26 2x5n_A SPRPN10, 26S proteasome 25.1 38 0.0013 26.2 2.4 21 3-23 126-146 (192)
27 1xyz_A 1,4-beta-D-xylan-xylano 21.8 37 0.0013 28.8 1.8 26 3-28 213-238 (347)
28 3mzk_B Protein transport prote 21.5 27 0.00093 31.1 0.9 32 6-37 7-38 (441)
No 1
>2f7f_A Nicotinate phosphoribosyltransferase, putative; structural genomics, PSI; 2.00A {Enterococcus faecalis} SCOP: c.1.17.1 d.41.2.1
Probab=100.00 E-value=4.9e-45 Score=334.69 Aligned_cols=176 Identities=31% Similarity=0.461 Sum_probs=165.9
Q ss_pred chhHHHHHhCCCeeeEEeecCccccCCCCCccceEEEEEEE---CCc--ceeeecCCCCccCCCCcceEEEeec-CCCCe
Q 029790 2 FQPFLFFEMKGHEVDAFGIGTYLVTCYAQAALGCVFKLVEI---NKQ--PRIKLSEDVSKVSIPCKKRSYRLYG-KEGYP 75 (188)
Q Consensus 2 ~~~I~~L~~~Ga~ID~fGVGT~LvT~~~~P~lg~VYKLvei---~g~--P~~K~S~~~~K~t~PG~KqvyR~~~-~~g~~ 75 (188)
.++|.+|.++|+++|+|||||+|+||.++|++|+|||||++ +|+ |++|+|++++|.|+||+|+|||+|+ .+|.+
T Consensus 297 ~~~i~~l~~~G~~~~sfGvGT~Lt~~~~~~~ld~v~Klv~~~~~~G~~~pv~K~s~~~~K~s~pG~k~v~R~~~~~~g~~ 376 (494)
T 2f7f_A 297 ENTILNLKMQKSKIDVWGVGTKLITAYDQPALGAVFKLVSIEGEDGQMKDTIKLSSNAEKVTTPGKKQVWRITRKSDKKS 376 (494)
T ss_dssp HHHHHHHHHTTCCCCEEEECHHHHTTTTSCCCCCEEEEEEEECTTSSEEECCCCCSSTTSSCCCSCEEEEEEEETTTCCE
T ss_pred HHHHHHHHHcCCCEEEEecCcccccCCCCCcccEEEEEEEEEcCCCcCccccccCCCCCCcCCCCceEEEEEeecCCCeE
Confidence 36899999999999999999999999999999999999999 999 9999999999999999999999998 57899
Q ss_pred eeeEEecCCCCCCCCCcceeeeCCCCCcceeeecCCceeeceeeeecCCcccCCCCCCCHHHHHHHHHHHHhhCChhhhh
Q 029790 76 LVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSDKRREDLPTLKDTRERCIKQLEQMRPDHMR 155 (188)
Q Consensus 76 ~~D~i~l~~e~~~~~~~~~~~~~p~~~~~~~~~~~~~~e~Ll~~v~~~Gk~v~~~~~psl~eiR~~~~~~l~~L~~~~~r 155 (188)
.+|+|++.+|++ ..++.+.|+||.++|+++++.++.+++||++||++|++++ +.|+|++||+|++++|++||++++|
T Consensus 377 ~~d~i~~~~e~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~ll~~v~~~G~~~~--~~~~l~eir~~~~~~l~~l~~~~~r 453 (494)
T 2f7f_A 377 EGDYVTLWNEDP-RQEEEIYMFHPVHTFINKYVRDFEARPVLQDIFVEGKRVY--ELPTLDEIKQYAKENLDSLHEEYKR 453 (494)
T ss_dssp EEEEEEETTCCG-GGCSEEEEECSSSTTSEEEEESEEEEECCEEEEETTEECC--CCCCHHHHHHHHHHHHHHSCHHHHC
T ss_pred EEEEEEecCCCC-ccccceeeeCcchhhhhccccCccchhhhhhhhcCCEEcC--CCCCHHHHHHHHHHHHHhCCHHHhc
Confidence 999999999863 3456789999999999999999999999999999999974 7899999999999999999999999
Q ss_pred ccCCcccccccCHHHHHHHHHHHhc
Q 029790 156 RLNPTPYKVSVSAKLYDFIHFLWLN 180 (188)
Q Consensus 156 l~~p~~Y~V~lS~~L~~l~~~l~~~ 180 (188)
+.|||+|+|++|++|++++++|+++
T Consensus 454 ~~~p~~y~v~~s~~l~~~~~~~~~~ 478 (494)
T 2f7f_A 454 DLNPQKYPVDLSTDCWNHKMNLLEK 478 (494)
T ss_dssp SSSCCCCCEEECHHHHHHHHHHHHH
T ss_pred ccCCcCCccccCHHHHHHHHHHHHH
Confidence 9999999999999999999999974
No 2
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1
Probab=99.91 E-value=8.5e-25 Score=195.78 Aligned_cols=116 Identities=23% Similarity=0.327 Sum_probs=98.5
Q ss_pred chhHHHHHhCCCeeeEEeecCccccCCCCCccceEEEEEEECCcceeeecCCCCccCCCCcceEEEeecCCCCeeeeEEe
Q 029790 2 FQPFLFFEMKGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDIMT 81 (188)
Q Consensus 2 ~~~I~~L~~~Ga~ID~fGVGT~LvT~~~~P~lg~VYKLvei~g~P~~K~S~~~~K~t~PG~KqvyR~~~~~g~~~~D~i~ 81 (188)
.++|.+|.++ ||+|||||.+.. +|++|+|||||+++|+|++|+| ++||+|+|||+|+ | +|+|+
T Consensus 279 ~~~i~~l~~~---vD~~gvGt~l~~---~~~ld~~~klv~~~g~p~~K~s------~~pG~k~~~R~~~--~---~d~~~ 341 (395)
T 2i14_A 279 EEKIKEIVDV---VDAFGVGGAIAS---AKPVDFALDIVEVEGKPIAKRG------KLSGRKQVYRCEN--G---HYHVV 341 (395)
T ss_dssp HHHHHTTGGG---CSEEEECHHHHT---CCCCCCEEEEEEETTEECCCTT------SCCSCEEEEEETT--S---CEEEE
T ss_pred HHHHHHHHHh---CCEEEeCcccCC---CCCccEEEEEEEeCCcceeeec------CCCCceEEEEEcC--C---ceEEE
Confidence 3678999888 999999999984 6999999999999999999998 5899999999987 4 59999
Q ss_pred cCCCCCCCCCcceeeeCCCCCcceeeecCCceeeceeeeecCCcccCCCCCCCHHHHHHHHHHHHhhCChh
Q 029790 82 GENEPPPKVGERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSDKRREDLPTLKDTRERCIKQLEQMRPD 152 (188)
Q Consensus 82 l~~e~~~~~~~~~~~~~p~~~~~~~~~~~~~~e~Ll~~v~~~Gk~v~~~~~psl~eiR~~~~~~l~~L~~~ 152 (188)
+.+|+++. . | ..+..+++||++||++|++++ +.|||++||+|++++|++||++
T Consensus 342 ~~~e~~~~--~------~--------~~~~~~~~ll~~~~~~G~~~~--~~~~l~~~r~~~~~~l~~l~~~ 394 (395)
T 2i14_A 342 PANKKLER--C------P--------VCNAKVEPLLKPIIENGEIVV--EFPKAREIREYVLEQAKKFNLE 394 (395)
T ss_dssp ETTSCCCB--C------S--------SSCCBEEECCEEEEBTTBCCC--CCCCHHHHHHHHHHHHHHTTCC
T ss_pred eCCCCCcc--c------c--------cccccccchhhhhhcCCEECC--CCCCHHHHHHHHHHHHHhCCCC
Confidence 99885321 0 0 012256899999999999974 7899999999999999999875
No 3
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=99.90 E-value=3.2e-24 Score=192.20 Aligned_cols=115 Identities=22% Similarity=0.353 Sum_probs=97.4
Q ss_pred chhHHHHHhCCCeeeEEeecCccccCCCCCccceEEEEEEECCcceeeecCCCCccCCCCcceEEEeecCCCCeeeeE-E
Q 029790 2 FQPFLFFEMKGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDI-M 80 (188)
Q Consensus 2 ~~~I~~L~~~Ga~ID~fGVGT~LvT~~~~P~lg~VYKLvei~g~P~~K~S~~~~K~t~PG~KqvyR~~~~~g~~~~D~-i 80 (188)
.++|.+|.++|+ |+|||||.+.. +|++|+|||||+++|+|++|+| ++||+|+|||+|+ | +|+ |
T Consensus 281 ~~~i~~l~~~Gv--D~~gvGt~l~~---~~~ld~~~Klv~~~g~p~~K~s------~~pG~k~~~r~~~--~---~d~~~ 344 (398)
T 2i1o_A 281 ENTVKKLREAGA--EAFGVGTSISS---AKPFDFAMDIVEVNGKPETKRG------KMSGRKNVLRCTS--C---HRIEV 344 (398)
T ss_dssp HHHHHHHHHTTC--CEEEECHHHHT---CCCCCEEEEEEEETTEECCCTT------SCCSCEEEEEETT--T---CCEEE
T ss_pred HHHHHHHHHcCC--CEEEeCcccCC---CCCccEEEEEEEeCCcceEeec------CCCCceEEEEEcC--C---CeEEE
Confidence 368999999995 99999999984 6999999999999999999998 5899999999986 4 499 9
Q ss_pred ecCCCCCCCCCcceeeeCCCCCcceeeecCCceeeceeeeecCCcccCCCCCCCHHHHHHHHHHHHhhCCh
Q 029790 81 TGENEPPPKVGERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSDKRREDLPTLKDTRERCIKQLEQMRP 151 (188)
Q Consensus 81 ~l~~e~~~~~~~~~~~~~p~~~~~~~~~~~~~~e~Ll~~v~~~Gk~v~~~~~psl~eiR~~~~~~l~~L~~ 151 (188)
++.+|+++.. ..+..+++||++||++|++++ +.|+|++||+|+++||++||.
T Consensus 345 ~~~~~~~~~~-----------------~~~~~~~~ll~~~~~~G~~~~--~~~~l~~~r~~~~~~l~~l~~ 396 (398)
T 2i1o_A 345 VPANVQEKTC-----------------ICGGSMQNLLVKYLSHGKRTS--EYPRPKEIRSRSMKELEYFKD 396 (398)
T ss_dssp EETTCCEECC-----------------SSSSCEEECCEEEEETTEESS--CCCCHHHHHHHHHHHGGGGC-
T ss_pred EecCCCCccc-----------------ccCccccchhhhheeCCEEcC--CCCCHHHHHHHHHHHHHhCcC
Confidence 9998753210 002246899999999999974 789999999999999999974
No 4
>3dhf_A Nicotinamide phosphoribosyltransferase; NMPRTASE, NAMPRTASE, visfatin, beryllium fluoride, nicotinamide D-ribonucleotide, pyrophosphate; HET: NMN; 1.80A {Homo sapiens} PDB: 3dgr_A* 3dhd_A* 3dkj_A* 3dkl_A* 2gvj_A* 2gvg_A* 2e5b_A 2e5c_A* 2e5d_A 2h3d_A* 2gvl_A 2h3b_A 2g95_A 2g96_A* 2g97_A* 3g8e_A*
Probab=99.90 E-value=1.7e-24 Score=197.91 Aligned_cols=110 Identities=20% Similarity=0.179 Sum_probs=94.0
Q ss_pred HHHHHhCCCeeeE--EeecCccccCCCCCccceEEE--EEEECC--cceeeecC-CCCccCCCCcceEEEeecCCCCeee
Q 029790 5 FLFFEMKGHEVDA--FGIGTYLVTCYAQAALGCVFK--LVEINK--QPRIKLSE-DVSKVSIPCKKRSYRLYGKEGYPLV 77 (188)
Q Consensus 5 I~~L~~~Ga~ID~--fGVGT~LvT~~~~P~lg~VYK--Lvei~g--~P~~K~S~-~~~K~t~PG~KqvyR~~~~~g~~~~ 77 (188)
|++|+++|++||. |||||+|+|+.++|+||+||| +|+++| +|++|+|. |.+|.|+||+|+|||. .+|
T Consensus 365 i~~l~~~G~~~d~v~fGvGT~L~~~~~~~~l~~v~K~~~v~~~G~~~pv~K~s~td~~K~S~pG~k~v~r~--~~g---- 438 (484)
T 3dhf_A 365 VEGMKQKMWSIENIAFGSGGGLLQKLTRDLLNCSFKCSYVVTNGLGINVFKDPVADPNKRSKKGRLSLHRT--PAG---- 438 (484)
T ss_dssp HHHHHHTTBCGGGEEEEESHHHHTSCCTTTTTEEEEEEEEEETTEEEECCCCCTTCGGGCCCCSSCEEEEC--TTS----
T ss_pred HHHHHhCCCCcccceEcccCccccCCCCCCCCEEEEEEEEEECCccceeeecCCCCCCccCCCcceEEEEe--CCC----
Confidence 8899999999998 999999999999999999999 888899 79999994 6899999999999996 234
Q ss_pred eEEecCCCCCCCCCcceeeeCCCCCcceeeecCCceeeceeeeecCCcccCCCCCCCHHHHHHHHH
Q 029790 78 DIMTGENEPPPKVGERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSDKRREDLPTLKDTRERCI 143 (188)
Q Consensus 78 D~i~l~~e~~~~~~~~~~~~~p~~~~~~~~~~~~~~e~Ll~~v~~~Gk~v~~~~~psl~eiR~~~~ 143 (188)
|++++.+|..+.. . ..++||++||+||+++ ..|+|++||+|++
T Consensus 439 ~~~~~~~~~~~~~-------------------~-~~~~lL~~v~~~G~~~---~~~~l~eiR~~~~ 481 (484)
T 3dhf_A 439 NFVTLEEGKGDLE-------------------E-YGQDLLHTVFKNGKVT---KSYSFDEIRKNAQ 481 (484)
T ss_dssp CEEEECTTGGGGC-------------------S-SCCCSCEEEEETTEEC---CCCCHHHHHHHTC
T ss_pred cEEEecCCCCCcc-------------------c-cccccchhheECCEEc---CCCCHHHHHHHHh
Confidence 8888877632110 0 1478999999999996 3589999999975
No 5
>1yir_A Naprtase 2, nicotinate phosphoribosyltransferase 2; structural genomics, protein structure initiative, hypothetical protein, NYSGXRC, PSI; 2.10A {Pseudomonas aeruginosa} SCOP: c.1.17.2 d.41.2.2
Probab=99.74 E-value=2e-19 Score=161.63 Aligned_cols=68 Identities=22% Similarity=0.221 Sum_probs=60.1
Q ss_pred chhHHHHHh--CCCeeeEEeecCccccCC-CCCccceEEEEEEECCcceeeecCCCCccC--CCCcceEEEee
Q 029790 2 FQPFLFFEM--KGHEVDAFGIGTYLVTCY-AQAALGCVFKLVEINKQPRIKLSEDVSKVS--IPCKKRSYRLY 69 (188)
Q Consensus 2 ~~~I~~L~~--~Ga~ID~fGVGT~LvT~~-~~P~lg~VYKLvei~g~P~~K~S~~~~K~t--~PG~KqvyR~~ 69 (188)
.++|.+|.+ +|+++|+|||||+|+|+. ++|+||+|||||++||+|++|+|++++|.| .||.|++||..
T Consensus 324 e~~i~~l~~~~~~~~~d~FGVGT~L~~~~~~~~~l~~V~Klv~~nG~pv~K~S~~~~K~t~~~pg~~~~~r~~ 396 (408)
T 1yir_A 324 LPRALKIYRALQGRINVSFGIGTHFTCDLPGVEPMNIVVKMSACNGHPVAKISDTPGKAQCRDPDFIHYLKHV 396 (408)
T ss_dssp HHHHHHHHHHHTTTSEEEEEECHHHHSCCTTCCCCCEEEEEEEETTEECCCCCSCC-------CHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCceEEEeChhhccCCCCCCccceEEEEEEECCeeeEecCCCCCCcCCCCccceeeEeee
Confidence 368999999 999999999999999998 899999999999999999999999999999 99999999975
No 6
>2im5_A Nicotinate phosphoribosyltransferase; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.20A {Porphyromonas gingivalis}
Probab=99.73 E-value=4.6e-19 Score=158.59 Aligned_cols=68 Identities=24% Similarity=0.167 Sum_probs=64.5
Q ss_pred chhHHHHHh--CCCeeeEEeecCccccCCC--CCccceEEEEEEEC------CcceeeecCCCCccCCCCcceEEEeec
Q 029790 2 FQPFLFFEM--KGHEVDAFGIGTYLVTCYA--QAALGCVFKLVEIN------KQPRIKLSEDVSKVSIPCKKRSYRLYG 70 (188)
Q Consensus 2 ~~~I~~L~~--~Ga~ID~fGVGT~LvT~~~--~P~lg~VYKLvei~------g~P~~K~S~~~~K~t~PG~KqvyR~~~ 70 (188)
.++|.+|.+ +|+++|+|||||+|+|+.+ +|+||+|||||+++ |+|++|+|++++|.|+| .|+|||+..
T Consensus 310 ~~~i~~l~~~~~g~~~d~FGvGT~L~~~~~~~~~~l~~V~Klv~~~~~~~~~g~p~~KlS~~~~K~t~p-~k~v~r~~~ 387 (394)
T 2im5_A 310 PQRAIEIQKLCAGRIKASFGIGTNLTNDVGGGVEPLNIVMKLWKCKMTAKDDWHYCVKLSDVDGKHTGE-PEEILLAMN 387 (394)
T ss_dssp HHHHHHHHHHHTTTSEEEEEECHHHHSCCSTTCCCCCEEEEEEEEESSTTSCCEECCBCCSSTTCCBSC-HHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCceEEEeCcccccCCCCCCCccceEeeeeeecccccCCCCceEEecCCCCCccCC-HHHHHHHHH
Confidence 368999999 9999999999999999998 99999999999998 99999999999999999 999999865
No 7
>1ybe_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.50A {Agrobacterium tumefaciens} SCOP: c.1.17.2 d.41.2.2
Probab=99.73 E-value=2.5e-19 Score=162.62 Aligned_cols=69 Identities=22% Similarity=0.240 Sum_probs=62.7
Q ss_pred chhHHHHHh--CCCeeeEEeecCcccc---------CCCCCccceEEEEEEECCcceeeecCCCCccCCCCcceEEEeec
Q 029790 2 FQPFLFFEM--KGHEVDAFGIGTYLVT---------CYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYG 70 (188)
Q Consensus 2 ~~~I~~L~~--~Ga~ID~fGVGT~LvT---------~~~~P~lg~VYKLvei~g~P~~K~S~~~~K~t~PG~KqvyR~~~ 70 (188)
.++|.+|.+ +|+++|+|||||+|+| |.++|+||+|||||++||+|++|+|++++|.| ||.|+|||++.
T Consensus 349 ~~~i~~l~~~~~g~~~d~FGVGT~L~~d~~~~~~~~~~~~~~l~~V~Klv~~nG~pv~K~S~~~~K~t-~g~k~v~r~~~ 427 (449)
T 1ybe_A 349 VDAIVDTYRHFEGRVRMSFGWGTNLTNDFAGCAPKTIASLKPISIVCKVSDANGRPAVKLSDNPQKAT-GDPAEVERYLK 427 (449)
T ss_dssp HHHHHHHHHHHTTTSEEEEEECHHHHCCCTTCCC-----CCCCCEEEEEEEETTEECCBCCSSGGGCB-SCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCceEEEeChhhccCcccccccccCCCCccceEEEEeeecCcceeecCCCCCCCC-CCHHHHHHHHh
Confidence 368999998 9999999999999999 66799999999999999999999999999999 99999999976
Q ss_pred C
Q 029790 71 K 71 (188)
Q Consensus 71 ~ 71 (188)
.
T Consensus 428 ~ 428 (449)
T 1ybe_A 428 F 428 (449)
T ss_dssp H
T ss_pred h
Confidence 4
No 8
>1vlp_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, joint center for structural genomics; HET: MSE MES; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.17.2 d.41.2.2
Probab=99.61 E-value=5.8e-17 Score=146.87 Aligned_cols=66 Identities=24% Similarity=0.350 Sum_probs=59.6
Q ss_pred chhHHHHH---hCCCeeeEEeecCcccc--------CCCCCccceEEEEEEECCcceeeecCCCCccCCCCcceEEEe
Q 029790 2 FQPFLFFE---MKGHEVDAFGIGTYLVT--------CYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRL 68 (188)
Q Consensus 2 ~~~I~~L~---~~Ga~ID~fGVGT~LvT--------~~~~P~lg~VYKLvei~g~P~~K~S~~~~K~t~PG~KqvyR~ 68 (188)
.++|.+|. ++|+++|+|||||+|+| |.++|+||+|||||++||+|++|+|++++|.|+| .+.|.|+
T Consensus 344 ~~~i~~l~~~~~~~~~~d~FGVGT~L~~~~~~~~~~~~~~~~l~~V~Klv~~nG~p~~KlS~~~~K~t~~-~~~~~~~ 420 (441)
T 1vlp_A 344 VEKAITYSHAAKENGMLATFGIGTNFTNDFRKKSEPQVKSEPLNIVIKLLEVNGNHAIKISDNLGKNMGD-PATVKRV 420 (441)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECHHHHSCEECSSSTTSEECCCCEEEEEEEETTEECCBCCSSTTCCBSC-HHHHHHH
T ss_pred HHHHHHHHHHHHcCCceEEEEeCchheecccccccccCCCCCcceEEEEEEECCeeeEEecCCCCCccCC-HHHHHHH
Confidence 36789998 79999999999999999 4478999999999999999999999999999999 6666665
No 9
>3os4_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel; HET: MSE; 1.60A {Yersinia pestis}
Probab=99.61 E-value=3e-16 Score=140.90 Aligned_cols=62 Identities=34% Similarity=0.339 Sum_probs=56.3
Q ss_pred hhHHHHHh--CCCeeeEEeecCccccCCC-CCccceEEEEEEECCcceeeecCCCCccC--CCCcce
Q 029790 3 QPFLFFEM--KGHEVDAFGIGTYLVTCYA-QAALGCVFKLVEINKQPRIKLSEDVSKVS--IPCKKR 64 (188)
Q Consensus 3 ~~I~~L~~--~Ga~ID~fGVGT~LvT~~~-~P~lg~VYKLvei~g~P~~K~S~~~~K~t--~PG~Kq 64 (188)
++|.+|.+ +|+++|+|||||+|+|+.+ +|+||+|||||+++|+|++|+|++++|.| .|+..+
T Consensus 320 ~~i~~l~~~~~~~~~d~fGVGT~L~~~~~~~~~l~~V~Klv~~~G~P~~KlSd~~~K~~~~~~~~~~ 386 (407)
T 3os4_A 320 EKALFLYRHFYQRIKLVFGIGTRLTCDIPDVKPLNIVIKLVECNDKPVAKLSDSPGKTICQDPAFVD 386 (407)
T ss_dssp HHHHHHHHHHTTTSEEEEEECHHHHSCCTTCCCCCEEEEEEEETTEECCCCCSSTTCCCCCCHHHHH
T ss_pred HHHHHHHHHhcCCCCcEEeechheeeCCCCCCCcceEEEEEEECCcceeEecCCCccccCCCHHHHH
Confidence 67899987 9999999999999999998 99999999999999999999999999997 444443
No 10
>4hl7_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative; 1.80A {Vibrio cholerae}
Probab=99.60 E-value=3.5e-16 Score=141.76 Aligned_cols=57 Identities=32% Similarity=0.375 Sum_probs=53.3
Q ss_pred hhHHHHHh--CCCeeeEEeecCccccCCC---------CCccceEEEEEEECCcceeeecCCCCccCC
Q 029790 3 QPFLFFEM--KGHEVDAFGIGTYLVTCYA---------QAALGCVFKLVEINKQPRIKLSEDVSKVSI 59 (188)
Q Consensus 3 ~~I~~L~~--~Ga~ID~fGVGT~LvT~~~---------~P~lg~VYKLvei~g~P~~K~S~~~~K~t~ 59 (188)
++|.+|.+ +|+++|+|||||+|+|+.+ +|+||+|||||+++|+|++|+|++++|.|.
T Consensus 330 ~~i~~L~~~~~~~~~d~FGVGT~L~~~~~~~~~~~~~~~~~l~~VyKLve~~G~P~~KlSd~~gK~t~ 397 (446)
T 4hl7_A 330 DQALELCEYFAGRVKISFGIGTFLTNDLANWRNAAGVEYRPLSIVIKLAECQGRPVAKISDQPEKAMC 397 (446)
T ss_dssp HHHHHHHHHHTTTSEEEEEECHHHHSCCTTCBCTTCCBCCCCEEEEEEEEETTEECCBCCSSGGGCBC
T ss_pred HHHHHHHHHhcCCCCcEEEeccceeccCcccccccccCCCCceeEEEEEEECCcceeEecCCcccccC
Confidence 57888875 9999999999999999988 899999999999999999999999999984
No 11
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A
Probab=44.82 E-value=14 Score=31.53 Aligned_cols=41 Identities=15% Similarity=0.214 Sum_probs=29.6
Q ss_pred hhHHHHHhCCCeeeEEeecCccccCCCCC-------------ccceEEEEEEEC
Q 029790 3 QPFLFFEMKGHEVDAFGIGTYLVTCYAQA-------------ALGCVFKLVEIN 43 (188)
Q Consensus 3 ~~I~~L~~~Ga~ID~fGVGT~LvT~~~~P-------------~lg~VYKLvei~ 43 (188)
+-|+.|+++|+|||++|+=.++.+....+ .+|.=--+.|++
T Consensus 196 ~~v~~l~~~G~~iDgiG~Q~H~~~~~p~~~~~~~~l~~~a~~~~Gl~i~ITElD 249 (348)
T 1w32_A 196 NLVQRLLNNGVPIDGVGFQMHVMNDYPSIANIRQAMQKIVALSPTLKIKITELD 249 (348)
T ss_dssp HHHHHHHHTTCCCCEEEECCEEESSSSCHHHHHHHHHHHHTTCSSCEEEEEEEE
T ss_pred HHHHHHHHCCCcccEEEeccccCCCCCCHHHHHHHHHHHhcccCCCeEEEEeCc
Confidence 34778999999999999988887654322 556655666665
No 12
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A
Probab=44.58 E-value=15 Score=31.45 Aligned_cols=25 Identities=20% Similarity=0.149 Sum_probs=21.9
Q ss_pred hhHHHHHhCCCeeeEEeecCccccC
Q 029790 3 QPFLFFEMKGHEVDAFGIGTYLVTC 27 (188)
Q Consensus 3 ~~I~~L~~~Ga~ID~fGVGT~LvT~ 27 (188)
+-|+.|+++|+|||++|+=.++.+.
T Consensus 207 ~lv~~l~~~GvpIdgIG~Q~H~~~~ 231 (341)
T 3niy_A 207 NMIKELKEKGVPVDGIGFQMHIDYR 231 (341)
T ss_dssp HHHHHHHHTTCCCCEEEECCEEETT
T ss_pred HHHHHHHHCCCCcceEeeeeecCCC
Confidence 4578899999999999999998765
No 13
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A*
Probab=42.81 E-value=7.2 Score=33.42 Aligned_cols=41 Identities=12% Similarity=0.118 Sum_probs=29.7
Q ss_pred hhHHHHHhCCCeeeEEeecCccccCCCCC-----------ccceEEEEEEEC
Q 029790 3 QPFLFFEMKGHEVDAFGIGTYLVTCYAQA-----------ALGCVFKLVEIN 43 (188)
Q Consensus 3 ~~I~~L~~~Ga~ID~fGVGT~LvT~~~~P-----------~lg~VYKLvei~ 43 (188)
.-|++|+++|+|||++|+=.++.++...+ ++|.--.+.|+|
T Consensus 191 ~~v~~l~~~GvpidgiG~Q~H~~~~~p~~~~~~~~l~~~a~lGl~v~iTElD 242 (331)
T 3emz_A 191 NLVRSLLDQGAPVHGIGMQGHWNIHGPSMDEIRQAIERYASLDVQLHVTELD 242 (331)
T ss_dssp HHHHHHHHHTCCCCEEEECCEEETTBSCHHHHHHHHHHHHTTSCEEEEEEEE
T ss_pred HHHHHHHHCCCccceEEECceecCCCCCHHHHHHHHHHHHHcCCcEEEeecc
Confidence 45788999999999999999987654222 355555566665
No 14
>4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens}
Probab=39.91 E-value=11 Score=32.45 Aligned_cols=25 Identities=16% Similarity=0.311 Sum_probs=22.1
Q ss_pred hhHHHHHhCCCeeeEEeecCccccC
Q 029790 3 QPFLFFEMKGHEVDAFGIGTYLVTC 27 (188)
Q Consensus 3 ~~I~~L~~~Ga~ID~fGVGT~LvT~ 27 (188)
.-|+.|+++|+|||++|+=.++.++
T Consensus 195 ~lv~~l~~~gvpidgiG~Q~H~~~~ 219 (335)
T 4f8x_A 195 QLVSNLRKRGIRIDGVGLESHFIVG 219 (335)
T ss_dssp HHHHHHHHTTCCCCEEEECCEEETT
T ss_pred HHHHHHHHCCCCcceeeeeeeecCC
Confidence 4578899999999999999999876
No 15
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A
Probab=38.47 E-value=12 Score=31.48 Aligned_cols=26 Identities=15% Similarity=0.225 Sum_probs=21.2
Q ss_pred hhHHHHHhCCCeeeEEeecCccccCC
Q 029790 3 QPFLFFEMKGHEVDAFGIGTYLVTCY 28 (188)
Q Consensus 3 ~~I~~L~~~Ga~ID~fGVGT~LvT~~ 28 (188)
+-|+.|+++|++||++|+=.++.+..
T Consensus 187 ~~v~~l~~~G~~iDgIG~Q~H~~~~~ 212 (313)
T 1v0l_A 187 NMVRDFKQRGVPIDCVGFQSHFNSGS 212 (313)
T ss_dssp HHHHHHHHHTCCCCEEEECCEEBTTB
T ss_pred HHHHHHHHCCCCcceEEEeEEccCCC
Confidence 45778899999999999977876654
No 16
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A
Probab=36.42 E-value=13 Score=31.48 Aligned_cols=25 Identities=12% Similarity=0.098 Sum_probs=20.9
Q ss_pred hhHHHHHhCCCeeeEEeecCccccC
Q 029790 3 QPFLFFEMKGHEVDAFGIGTYLVTC 27 (188)
Q Consensus 3 ~~I~~L~~~Ga~ID~fGVGT~LvT~ 27 (188)
+-|++|+++|+|||++|+=.++.+.
T Consensus 192 ~~v~~l~~~g~~idgiG~Q~H~~~~ 216 (331)
T 1n82_A 192 ALVKSLRDKGIPIHGIGMQAHWSLT 216 (331)
T ss_dssp HHHHHHHHTTCCCCEEEECCEEESS
T ss_pred HHHHHHHHCCCccceEEeceecCCC
Confidence 4578899999999999998888654
No 17
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A
Probab=35.99 E-value=13 Score=32.29 Aligned_cols=26 Identities=12% Similarity=0.196 Sum_probs=21.6
Q ss_pred hhHHHHHhCCCeeeEEeecCccccCC
Q 029790 3 QPFLFFEMKGHEVDAFGIGTYLVTCY 28 (188)
Q Consensus 3 ~~I~~L~~~Ga~ID~fGVGT~LvT~~ 28 (188)
+-|+.|+++|+|||++|+=.++.+..
T Consensus 216 ~~v~~l~~~g~piDgIG~Q~H~~~~~ 241 (379)
T 1r85_A 216 NLVKQLKEEGVPIDGIGHQSHIQIGW 241 (379)
T ss_dssp HHHHHHHHTTCCCCEEEECCEECSSS
T ss_pred HHHHHHHHCCCceeEEEEeEEecCCC
Confidence 45788999999999999988886643
No 18
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3
Probab=33.54 E-value=17 Score=30.12 Aligned_cols=26 Identities=15% Similarity=0.241 Sum_probs=21.0
Q ss_pred hhHHHHHhCCCeeeEEeecCccccCC
Q 029790 3 QPFLFFEMKGHEVDAFGIGTYLVTCY 28 (188)
Q Consensus 3 ~~I~~L~~~Ga~ID~fGVGT~LvT~~ 28 (188)
+-|+.|+++|++||++|+=.++.+..
T Consensus 186 ~~v~~l~~~G~~iDgIG~q~H~~~~~ 211 (302)
T 1nq6_A 186 EMVKDFKQRGVPIDCVGFQSHFNSNS 211 (302)
T ss_dssp HHHHHHHHHTCCCCEEEECCEEBTTB
T ss_pred HHHHHHHHCCCCcceEEEEEeecCCC
Confidence 35678888999999999988886543
No 19
>3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum}
Probab=31.94 E-value=16 Score=31.14 Aligned_cols=24 Identities=13% Similarity=0.275 Sum_probs=21.4
Q ss_pred hhHHHHHhCCCeeeEEeecCcccc
Q 029790 3 QPFLFFEMKGHEVDAFGIGTYLVT 26 (188)
Q Consensus 3 ~~I~~L~~~Ga~ID~fGVGT~LvT 26 (188)
.-|+.|+++|+|||++|+=.++..
T Consensus 188 ~~v~~l~~~GvpidgiG~Q~H~~~ 211 (327)
T 3u7b_A 188 RIARLVKSYGLRIDGIGLQAHMTS 211 (327)
T ss_dssp HHHHHHHHTTCCCCEEEECCEEES
T ss_pred HHHHHHHHCCCCcceEEEcccccc
Confidence 457889999999999999999986
No 20
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A*
Probab=31.15 E-value=17 Score=31.17 Aligned_cols=25 Identities=12% Similarity=0.062 Sum_probs=20.6
Q ss_pred hhHHHHHhCCCeeeEEeecCccccC
Q 029790 3 QPFLFFEMKGHEVDAFGIGTYLVTC 27 (188)
Q Consensus 3 ~~I~~L~~~Ga~ID~fGVGT~LvT~ 27 (188)
+-|+.|+++|++||++|+=.++.++
T Consensus 206 ~~v~~l~~~G~~idgiG~Q~H~~~~ 230 (356)
T 2uwf_A 206 NLVKDLLEQGVPIDGVGHQSHIQIG 230 (356)
T ss_dssp HHHHHHHHTTCCCCEEEECCEEESS
T ss_pred HHHHHHHHCCCcccEEEEEEecCCC
Confidence 3567889999999999998887654
No 21
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3
Probab=30.66 E-value=22 Score=29.75 Aligned_cols=26 Identities=12% Similarity=0.093 Sum_probs=21.1
Q ss_pred hhHHHHHhCCCeeeEEeecCccccCC
Q 029790 3 QPFLFFEMKGHEVDAFGIGTYLVTCY 28 (188)
Q Consensus 3 ~~I~~L~~~Ga~ID~fGVGT~LvT~~ 28 (188)
+-|+.|+++|+|||++|+=.++.++.
T Consensus 188 ~~v~~l~~~G~~iDgiG~Q~H~~~~~ 213 (303)
T 1ta3_B 188 SYVKKWLAEGVPIDGIGSQAHYSSSH 213 (303)
T ss_dssp HHHHHHHHTTCCCCEEEECCEECTTC
T ss_pred HHHHHHHHCCCCcceEEEeeecCCCC
Confidence 45678899999999999977876654
No 22
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A*
Probab=29.58 E-value=19 Score=31.23 Aligned_cols=25 Identities=16% Similarity=0.179 Sum_probs=20.7
Q ss_pred hhHHHHHhCCCeeeEEeecCccccC
Q 029790 3 QPFLFFEMKGHEVDAFGIGTYLVTC 27 (188)
Q Consensus 3 ~~I~~L~~~Ga~ID~fGVGT~LvT~ 27 (188)
+-|+.|+++|++||++|+=.++.+.
T Consensus 213 ~~v~~l~~~g~~iDgiG~Q~H~~~~ 237 (378)
T 1ur1_A 213 EMIERLQKRGMPIHGLGIQGHLGID 237 (378)
T ss_dssp HHHHHHHHTTCCCCEEEECCEEESS
T ss_pred HHHHHHHHCCCCcceEEecCcCCCC
Confidence 4578899999999999998887543
No 23
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A
Probab=29.17 E-value=22 Score=29.66 Aligned_cols=25 Identities=20% Similarity=0.222 Sum_probs=20.3
Q ss_pred hhHHHHHhCCCeeeEEeecCccccC
Q 029790 3 QPFLFFEMKGHEVDAFGIGTYLVTC 27 (188)
Q Consensus 3 ~~I~~L~~~Ga~ID~fGVGT~LvT~ 27 (188)
+-|++|+++|++||++|+=.++.+.
T Consensus 189 ~~v~~l~~~G~~iDgiG~Q~H~~~~ 213 (303)
T 1i1w_A 189 NRVKKWRAAGVPIDGIGSQTHLSAG 213 (303)
T ss_dssp HHHHHHHHTTCCCCEEEECCEECTT
T ss_pred HHHHHHHHCCCcccEEEeccccCCC
Confidence 4577889999999999997777553
No 24
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A
Probab=28.91 E-value=22 Score=31.04 Aligned_cols=25 Identities=16% Similarity=0.224 Sum_probs=20.7
Q ss_pred hHHHHHhCCCeeeEEeecCccccCC
Q 029790 4 PFLFFEMKGHEVDAFGIGTYLVTCY 28 (188)
Q Consensus 4 ~I~~L~~~Ga~ID~fGVGT~LvT~~ 28 (188)
-|+.|+++|++||++|+=.++.+..
T Consensus 188 ~v~~l~~~g~~iDgiG~q~H~~~~~ 212 (436)
T 2d1z_A 188 MVRDFKQRGVPIDCVGFQSHFNSGS 212 (436)
T ss_dssp HHHHHHHHTCCCCEEEECCEEBTTB
T ss_pred HHHHHHhCCCcccEEEEeeEEcCCC
Confidence 4788999999999999977876543
No 25
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium}
Probab=27.25 E-value=22 Score=30.40 Aligned_cols=25 Identities=20% Similarity=0.131 Sum_probs=20.3
Q ss_pred hhHHHHHhCCCeeeEEeecCccccC
Q 029790 3 QPFLFFEMKGHEVDAFGIGTYLVTC 27 (188)
Q Consensus 3 ~~I~~L~~~Ga~ID~fGVGT~LvT~ 27 (188)
+-|+.|+++|+|||++|+=.++.+.
T Consensus 205 ~~v~~l~~~G~~idgiG~Q~H~~~~ 229 (356)
T 2dep_A 205 ELVKNLLEKGVPIDGVGHQTHIDIY 229 (356)
T ss_dssp HHHHHHHHTTCCCCEEEECCEEESS
T ss_pred HHHHHHHHCCCCccEEEeeeeecCC
Confidence 4567889999999999997787654
No 26
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=25.11 E-value=38 Score=26.17 Aligned_cols=21 Identities=14% Similarity=0.150 Sum_probs=18.1
Q ss_pred hhHHHHHhCCCeeeEEeecCc
Q 029790 3 QPFLFFEMKGHEVDAFGIGTY 23 (188)
Q Consensus 3 ~~I~~L~~~Ga~ID~fGVGT~ 23 (188)
+.++.++++|..|+.+|+||.
T Consensus 126 ~~a~~lk~~gi~v~~Ig~G~~ 146 (192)
T 2x5n_A 126 RLAKRMKKNNVAIDIIHIGEL 146 (192)
T ss_dssp HHHHHHHHTTEEEEEEEESCC
T ss_pred HHHHHHHHCCCEEEEEEeCCC
Confidence 356788999999999999985
No 27
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3
Probab=21.83 E-value=37 Score=28.78 Aligned_cols=26 Identities=12% Similarity=0.229 Sum_probs=21.0
Q ss_pred hhHHHHHhCCCeeeEEeecCccccCC
Q 029790 3 QPFLFFEMKGHEVDAFGIGTYLVTCY 28 (188)
Q Consensus 3 ~~I~~L~~~Ga~ID~fGVGT~LvT~~ 28 (188)
+-++.|+++|++||++|+=.++.++.
T Consensus 213 ~~v~~l~~~G~~idgiG~Q~H~~~~~ 238 (347)
T 1xyz_A 213 NMIKSMKERGVPIDGVGFQCHFINGM 238 (347)
T ss_dssp HHHHHHHHTTCCCCEEEECCEEESSC
T ss_pred HHHHHHHHCCCCcceEEEeeecCCCC
Confidence 45677899999999999988887554
No 28
>3mzk_B Protein transport protein SEC16; alpha-helical-stack, beta-propeller; 2.69A {Saccharomyces cerevisiae}
Probab=21.47 E-value=27 Score=31.14 Aligned_cols=32 Identities=3% Similarity=-0.056 Sum_probs=21.4
Q ss_pred HHHHhCCCeeeEEeecCccccCCCCCccceEE
Q 029790 6 LFFEMKGHEVDAFGIGTYLVTCYAQAALGCVF 37 (188)
Q Consensus 6 ~~L~~~Ga~ID~fGVGT~LvT~~~~P~lg~VY 37 (188)
+.|+..++||=.||+|.++|++-....-..+|
T Consensus 7 ~al~~rq~Pif~wg~ggkiv~~~P~~~~~~~~ 38 (441)
T 3mzk_B 7 EALLRRQFPIFHWSAANKVVYAVPPIPDQSQY 38 (441)
T ss_dssp --CTTSCCCEEEECTTSEEEEECCCC------
T ss_pred HHHhhCCCCEEEEeCCCEEEEEeCCCCCcccc
Confidence 46788999999999999999987644434445
Done!