Query 029791
Match_columns 188
No_of_seqs 164 out of 1220
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 05:23:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029791.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029791hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pym_A GAPDH 3, glyceraldehyde 100.0 1E-71 3.4E-76 479.3 22.3 183 4-188 2-184 (332)
2 3v1y_O PP38, glyceraldehyde-3- 100.0 4.4E-72 1.5E-76 482.3 20.0 187 1-188 1-188 (337)
3 3lvf_P GAPDH 1, glyceraldehyde 100.0 9.8E-71 3.3E-75 473.8 21.9 183 3-188 4-187 (338)
4 3doc_A Glyceraldehyde 3-phosph 100.0 1.6E-70 5.3E-75 472.4 20.5 184 2-188 1-187 (335)
5 3h9e_O Glyceraldehyde-3-phosph 100.0 7.3E-70 2.5E-74 469.9 21.9 183 3-188 7-190 (346)
6 3ids_C GAPDH, glyceraldehyde-3 100.0 2.5E-70 8.5E-75 474.1 18.5 186 2-188 1-201 (359)
7 4dib_A GAPDH, glyceraldehyde 3 100.0 5.4E-70 1.8E-74 469.9 19.4 183 3-188 4-188 (345)
8 3hja_A GAPDH, glyceraldehyde-3 100.0 5.9E-67 2E-71 452.6 17.0 182 3-188 21-208 (356)
9 2b4r_O Glyceraldehyde-3-phosph 100.0 2E-66 6.7E-71 449.3 19.9 186 1-188 9-195 (345)
10 1obf_O Glyceraldehyde 3-phosph 100.0 5.3E-65 1.8E-69 439.3 21.4 182 4-188 2-188 (335)
11 2ep7_A GAPDH, glyceraldehyde-3 100.0 3.4E-65 1.2E-69 441.3 17.5 183 3-188 2-186 (342)
12 2g82_O GAPDH, glyceraldehyde-3 100.0 7.4E-59 2.5E-63 401.3 19.7 181 4-188 1-183 (331)
13 2d2i_A Glyceraldehyde 3-phosph 100.0 1.6E-58 5.6E-63 404.8 20.7 184 2-188 1-189 (380)
14 3b1j_A Glyceraldehyde 3-phosph 100.0 2.6E-57 9E-62 392.9 22.3 184 2-188 1-189 (339)
15 3cps_A Glyceraldehyde 3-phosph 100.0 1.2E-57 4.1E-62 396.6 19.7 185 2-188 16-202 (354)
16 1rm4_O Glyceraldehyde 3-phosph 100.0 1.7E-57 5.8E-62 393.5 20.5 183 4-188 2-187 (337)
17 3e5r_O PP38, glyceraldehyde-3- 100.0 1.5E-56 5E-61 388.0 20.4 187 1-188 1-188 (337)
18 3cmc_O GAPDH, glyceraldehyde-3 100.0 1.4E-56 4.7E-61 387.7 19.8 182 4-188 2-185 (334)
19 1u8f_O GAPDH, glyceraldehyde-3 100.0 2.8E-56 9.7E-61 386.0 20.2 186 1-188 1-186 (335)
20 1hdg_O Holo-D-glyceraldehyde-3 100.0 7.1E-56 2.4E-60 383.0 18.9 182 4-188 1-185 (332)
21 1gad_O D-glyceraldehyde-3-phos 100.0 1.6E-55 5.3E-60 380.6 19.2 181 4-188 2-183 (330)
22 2x5j_O E4PDH, D-erythrose-4-ph 100.0 2.7E-55 9.4E-60 380.3 19.7 184 2-188 1-189 (339)
23 2yyy_A Glyceraldehyde-3-phosph 100.0 1.7E-45 5.7E-50 319.5 8.4 167 1-186 1-176 (343)
24 1cf2_P Protein (glyceraldehyde 100.0 2.9E-36 1E-40 260.8 6.0 164 4-185 2-171 (337)
25 2r00_A Aspartate-semialdehyde 100.0 5.1E-33 1.7E-37 240.3 15.9 155 1-188 1-165 (336)
26 2czc_A Glyceraldehyde-3-phosph 100.0 3.6E-34 1.2E-38 247.1 7.7 166 2-187 1-172 (334)
27 1b7g_O Protein (glyceraldehyde 100.0 2.4E-33 8.1E-38 242.8 8.9 167 4-185 2-170 (340)
28 2yv3_A Aspartate-semialdehyde 100.0 2.5E-32 8.5E-37 235.7 15.1 151 4-186 1-157 (331)
29 2hjs_A USG-1 protein homolog; 100.0 2E-32 6.9E-37 236.9 12.2 156 2-188 5-167 (340)
30 1t4b_A Aspartate-semialdehyde 100.0 8.2E-33 2.8E-37 241.7 1.0 157 4-187 2-168 (367)
31 2ep5_A 350AA long hypothetical 100.0 6.2E-32 2.1E-36 234.6 6.1 167 2-188 3-185 (350)
32 1ys4_A Aspartate-semialdehyde 100.0 7.1E-31 2.4E-35 228.0 8.6 168 2-188 7-191 (354)
33 1xyg_A Putative N-acetyl-gamma 100.0 1.4E-30 4.8E-35 226.9 9.5 159 1-188 14-199 (359)
34 2ozp_A N-acetyl-gamma-glutamyl 100.0 3.5E-29 1.2E-33 217.0 12.4 158 1-188 1-185 (345)
35 3pwk_A Aspartate-semialdehyde 99.9 1E-26 3.5E-31 203.0 16.1 152 2-186 1-160 (366)
36 3tz6_A Aspartate-semialdehyde 99.9 2.1E-26 7.1E-31 199.6 16.0 150 4-186 2-161 (344)
37 3pzr_A Aspartate-semialdehyde 99.9 1.1E-27 3.7E-32 209.4 5.1 152 4-186 1-166 (370)
38 3uw3_A Aspartate-semialdehyde 99.9 2.5E-27 8.7E-32 207.5 4.1 153 3-186 4-170 (377)
39 4dpk_A Malonyl-COA/succinyl-CO 99.9 3.2E-26 1.1E-30 199.5 9.9 167 3-188 7-187 (359)
40 4dpl_A Malonyl-COA/succinyl-CO 99.9 3.2E-26 1.1E-30 199.5 9.9 167 3-188 7-187 (359)
41 3hsk_A Aspartate-semialdehyde 99.9 3.1E-25 1.1E-29 194.5 8.7 168 1-188 17-207 (381)
42 2nqt_A N-acetyl-gamma-glutamyl 99.9 1.2E-24 4E-29 189.1 9.4 159 1-186 7-191 (352)
43 3dr3_A N-acetyl-gamma-glutamyl 99.9 1.5E-23 5E-28 181.3 4.8 158 4-188 5-194 (337)
44 1vkn_A N-acetyl-gamma-glutamyl 99.8 7.1E-21 2.4E-25 165.2 5.9 155 3-188 13-193 (351)
45 1nvm_B Acetaldehyde dehydrogen 98.9 1.2E-08 4.1E-13 86.9 10.4 156 1-184 1-163 (312)
46 1f06_A MESO-diaminopimelate D- 98.6 1.2E-07 4.2E-12 80.5 7.5 91 1-127 1-91 (320)
47 3bio_A Oxidoreductase, GFO/IDH 98.5 2.3E-07 8E-12 78.2 6.5 91 1-126 7-97 (304)
48 3e18_A Oxidoreductase; dehydro 98.3 1.9E-06 6.5E-11 73.9 8.9 95 1-126 3-97 (359)
49 3gdo_A Uncharacterized oxidore 98.3 1.5E-06 5.1E-11 74.5 8.0 94 1-126 3-97 (358)
50 3ec7_A Putative dehydrogenase; 98.3 1.8E-06 6.3E-11 73.9 7.7 98 1-126 21-119 (357)
51 3db2_A Putative NADPH-dependen 98.2 2.8E-06 9.7E-11 72.4 8.4 94 2-126 4-98 (354)
52 4hkt_A Inositol 2-dehydrogenas 98.2 2.4E-06 8.2E-11 72.1 7.8 93 3-126 3-95 (331)
53 4f3y_A DHPR, dihydrodipicolina 98.2 1.7E-06 5.7E-11 72.4 6.7 97 1-123 5-102 (272)
54 3e9m_A Oxidoreductase, GFO/IDH 98.2 2E-06 6.8E-11 72.8 7.1 97 1-126 3-99 (330)
55 4fb5_A Probable oxidoreductase 98.2 2.3E-06 7.7E-11 72.9 7.4 97 1-126 23-126 (393)
56 3qy9_A DHPR, dihydrodipicolina 98.2 1.9E-06 6.5E-11 70.9 6.5 36 1-37 1-36 (243)
57 3fhl_A Putative oxidoreductase 98.2 2.4E-06 8.2E-11 73.2 7.3 93 2-126 4-97 (362)
58 3ezy_A Dehydrogenase; structur 98.2 2.5E-06 8.4E-11 72.5 7.3 96 1-126 1-96 (344)
59 3kux_A Putative oxidoreductase 98.2 3.3E-06 1.1E-10 72.0 7.8 94 1-126 4-99 (352)
60 3ing_A Homoserine dehydrogenas 98.2 3.9E-06 1.3E-10 71.8 8.2 37 1-37 2-44 (325)
61 3evn_A Oxidoreductase, GFO/IDH 98.2 2.3E-06 8E-11 72.3 6.5 97 1-126 3-99 (329)
62 4h3v_A Oxidoreductase domain p 98.2 1.2E-06 4E-11 74.6 4.5 96 1-126 4-107 (390)
63 3e82_A Putative oxidoreductase 98.1 5.9E-06 2E-10 71.0 8.0 92 3-126 7-99 (364)
64 3mz0_A Inositol 2-dehydrogenas 98.1 5.6E-06 1.9E-10 70.3 7.7 97 2-126 1-98 (344)
65 2ixa_A Alpha-N-acetylgalactosa 98.1 8.4E-06 2.9E-10 71.8 8.8 105 1-126 18-123 (444)
66 3euw_A MYO-inositol dehydrogen 98.1 8.2E-06 2.8E-10 69.2 8.5 96 1-126 1-97 (344)
67 2ejw_A HDH, homoserine dehydro 98.1 5.5E-06 1.9E-10 71.1 7.4 88 1-125 1-97 (332)
68 3i23_A Oxidoreductase, GFO/IDH 98.1 5.6E-06 1.9E-10 70.6 7.4 96 2-126 1-97 (349)
69 4ew6_A D-galactose-1-dehydroge 98.1 2.9E-06 9.8E-11 72.1 5.5 89 1-126 23-113 (330)
70 3cea_A MYO-inositol 2-dehydrog 98.1 1E-05 3.4E-10 68.4 8.2 96 2-126 7-103 (346)
71 3ohs_X Trans-1,2-dihydrobenzen 98.1 6.6E-06 2.2E-10 69.6 7.1 96 1-126 1-98 (334)
72 3rc1_A Sugar 3-ketoreductase; 98.1 8.9E-06 3.1E-10 69.5 7.6 96 1-126 25-121 (350)
73 3m2t_A Probable dehydrogenase; 98.0 8.3E-06 2.8E-10 69.9 7.2 97 1-126 3-100 (359)
74 1tlt_A Putative oxidoreductase 98.0 8.5E-06 2.9E-10 68.4 6.9 93 1-126 3-97 (319)
75 3f4l_A Putative oxidoreductase 98.0 1.1E-05 3.7E-10 68.6 7.4 94 3-126 2-97 (345)
76 1ydw_A AX110P-like protein; st 98.0 1.1E-05 3.9E-10 68.8 7.2 99 2-126 5-103 (362)
77 3uuw_A Putative oxidoreductase 98.0 1.3E-05 4.5E-10 66.9 7.5 94 1-127 4-99 (308)
78 1dih_A Dihydrodipicolinate red 98.0 1.1E-05 3.6E-10 67.4 6.8 101 1-126 3-104 (273)
79 4had_A Probable oxidoreductase 98.0 8.8E-06 3E-10 69.0 6.4 94 3-126 23-118 (350)
80 4gqa_A NAD binding oxidoreduct 98.0 5.8E-06 2E-10 71.8 5.2 95 3-126 26-128 (412)
81 2ho3_A Oxidoreductase, GFO/IDH 98.0 2.4E-05 8.1E-10 65.8 8.6 93 4-126 2-94 (325)
82 3ijp_A DHPR, dihydrodipicolina 98.0 3.8E-06 1.3E-10 70.8 3.7 96 3-123 21-117 (288)
83 3c8m_A Homoserine dehydrogenas 98.0 6.3E-06 2.1E-10 70.5 4.8 105 1-125 4-120 (331)
84 1h6d_A Precursor form of gluco 98.0 2.3E-05 7.7E-10 69.0 8.5 101 1-126 81-182 (433)
85 3mtj_A Homoserine dehydrogenas 97.9 2.2E-05 7.5E-10 69.9 8.2 93 2-126 9-111 (444)
86 3q2i_A Dehydrogenase; rossmann 97.9 1.3E-05 4.3E-10 68.3 6.5 94 3-126 13-107 (354)
87 2dc1_A L-aspartate dehydrogena 97.9 9.7E-06 3.3E-10 65.5 5.4 134 4-183 1-136 (236)
88 3c1a_A Putative oxidoreductase 97.9 1.4E-05 4.8E-10 66.9 6.3 92 3-126 10-101 (315)
89 3do5_A HOM, homoserine dehydro 97.9 1.6E-05 5.3E-10 68.1 6.3 96 3-125 2-114 (327)
90 3upl_A Oxidoreductase; rossman 97.8 3.2E-05 1.1E-09 68.8 7.1 107 2-118 22-133 (446)
91 1xea_A Oxidoreductase, GFO/IDH 97.8 0.00012 4E-09 61.5 9.9 94 1-126 1-95 (323)
92 3v5n_A Oxidoreductase; structu 97.8 4E-05 1.4E-09 67.0 7.0 98 1-126 35-142 (417)
93 3dty_A Oxidoreductase, GFO/IDH 97.8 3.8E-05 1.3E-09 66.5 6.7 103 1-126 10-117 (398)
94 1zh8_A Oxidoreductase; TM0312, 97.8 5.3E-05 1.8E-09 64.3 7.4 95 3-126 18-114 (340)
95 1p9l_A Dihydrodipicolinate red 97.7 0.00015 5.3E-09 59.5 9.5 38 4-41 1-39 (245)
96 3u3x_A Oxidoreductase; structu 97.7 4.7E-05 1.6E-09 65.2 6.4 96 1-126 24-120 (361)
97 3moi_A Probable dehydrogenase; 97.7 4.6E-05 1.6E-09 65.8 6.0 93 3-126 2-96 (387)
98 1lc0_A Biliverdin reductase A; 97.7 4.3E-05 1.5E-09 63.8 5.5 88 3-126 7-97 (294)
99 3o9z_A Lipopolysaccaride biosy 97.7 9.4E-05 3.2E-09 62.2 7.3 94 3-126 3-104 (312)
100 2nvw_A Galactose/lactose metab 97.7 3.9E-05 1.3E-09 68.5 5.1 100 1-126 37-146 (479)
101 2p2s_A Putative oxidoreductase 97.7 0.0001 3.4E-09 62.2 7.3 95 1-126 2-98 (336)
102 2glx_A 1,5-anhydro-D-fructose 97.6 0.00016 5.3E-09 60.7 8.4 93 4-126 1-94 (332)
103 3btv_A Galactose/lactose metab 97.6 2.6E-05 8.9E-10 68.7 3.4 98 3-126 20-127 (438)
104 3oa2_A WBPB; oxidoreductase, s 97.6 0.00016 5.4E-09 61.0 7.4 94 3-126 3-105 (318)
105 3ic5_A Putative saccharopine d 97.5 0.00026 8.8E-09 49.7 6.5 96 3-124 5-100 (118)
106 1j5p_A Aspartate dehydrogenase 97.5 0.00015 5.1E-09 60.0 5.8 81 3-126 12-92 (253)
107 3ip3_A Oxidoreductase, putativ 97.4 5.1E-05 1.7E-09 64.2 2.3 97 1-126 1-99 (337)
108 3oqb_A Oxidoreductase; structu 97.3 0.00025 8.4E-09 60.8 4.9 96 1-126 4-115 (383)
109 2dt5_A AT-rich DNA-binding pro 97.2 0.0003 1E-08 56.5 4.7 94 3-127 80-174 (211)
110 2vt3_A REX, redox-sensing tran 97.2 0.00094 3.2E-08 53.8 7.3 94 3-127 85-179 (215)
111 1r0k_A 1-deoxy-D-xylulose 5-ph 97.1 0.00036 1.2E-08 61.0 4.5 108 4-123 5-122 (388)
112 3keo_A Redox-sensing transcrip 96.9 0.00077 2.6E-08 54.3 4.1 96 3-126 84-181 (212)
113 3ggo_A Prephenate dehydrogenas 96.8 0.0097 3.3E-07 50.0 10.4 91 3-127 33-129 (314)
114 4gmf_A Yersiniabactin biosynth 96.7 0.0054 1.8E-07 53.0 8.6 135 3-172 7-177 (372)
115 3abi_A Putative uncharacterize 96.4 0.0014 4.7E-08 56.0 2.8 93 3-126 16-108 (365)
116 2nu8_A Succinyl-COA ligase [AD 96.4 0.0073 2.5E-07 50.3 6.9 87 3-123 7-94 (288)
117 1y81_A Conserved hypothetical 96.3 0.02 6.8E-07 42.5 8.5 85 3-126 14-102 (138)
118 1ebf_A Homoserine dehydrogenas 96.3 0.0038 1.3E-07 53.8 4.8 35 2-36 3-40 (358)
119 3a06_A 1-deoxy-D-xylulose 5-ph 96.2 0.016 5.5E-07 50.3 8.0 111 1-124 1-115 (376)
120 4huj_A Uncharacterized protein 96.0 0.0059 2E-07 48.4 4.3 35 1-36 21-55 (220)
121 3d1l_A Putative NADP oxidoredu 96.0 0.028 9.7E-07 45.2 8.3 32 4-36 11-42 (266)
122 3ius_A Uncharacterized conserv 95.7 0.11 3.6E-06 41.7 10.7 32 3-35 5-36 (286)
123 2bma_A Glutamate dehydrogenase 95.5 0.087 3E-06 47.0 10.1 103 4-123 253-365 (470)
124 2duw_A Putative COA-binding pr 95.3 0.07 2.4E-06 39.8 7.6 85 4-125 14-102 (145)
125 1qyd_A Pinoresinol-lariciresin 95.2 0.031 1E-06 45.5 5.9 34 1-35 1-36 (313)
126 2d59_A Hypothetical protein PH 95.2 0.084 2.9E-06 39.2 7.7 83 4-125 23-109 (144)
127 3i6i_A Putative leucoanthocyan 95.1 0.018 6.1E-07 48.0 4.4 35 1-36 8-43 (346)
128 1iuk_A Hypothetical protein TT 94.9 0.067 2.3E-06 39.7 6.6 86 4-126 14-103 (140)
129 1oi7_A Succinyl-COA synthetase 94.9 0.054 1.8E-06 45.1 6.5 87 3-123 7-94 (288)
130 3b1f_A Putative prephenate deh 94.6 0.029 9.8E-07 45.8 4.1 35 1-36 4-39 (290)
131 3e48_A Putative nucleoside-dip 94.5 0.044 1.5E-06 44.1 5.1 32 4-35 1-33 (289)
132 3qvo_A NMRA family protein; st 94.4 0.076 2.6E-06 41.7 6.2 35 1-35 21-56 (236)
133 4ina_A Saccharopine dehydrogen 94.4 0.02 6.7E-07 49.8 2.9 97 4-119 2-102 (405)
134 1qyc_A Phenylcoumaran benzylic 94.4 0.049 1.7E-06 44.1 5.1 34 1-35 1-36 (308)
135 3dqp_A Oxidoreductase YLBE; al 94.2 0.12 4.3E-06 39.8 6.8 30 5-35 2-32 (219)
136 1id1_A Putative potassium chan 94.1 0.062 2.1E-06 39.6 4.8 34 1-35 1-34 (153)
137 1vm6_A DHPR, dihydrodipicolina 94.1 0.11 3.7E-06 42.1 6.4 32 4-36 13-45 (228)
138 3dhn_A NAD-dependent epimerase 93.9 0.13 4.3E-06 39.8 6.4 32 3-35 4-36 (227)
139 3tri_A Pyrroline-5-carboxylate 93.9 0.058 2E-06 44.3 4.6 35 1-36 1-37 (280)
140 2i76_A Hypothetical protein; N 93.8 0.018 6E-07 47.1 1.2 33 1-36 1-33 (276)
141 2ew2_A 2-dehydropantoate 2-red 93.7 0.066 2.2E-06 43.6 4.6 33 1-34 1-33 (316)
142 1t2d_A LDH-P, L-lactate dehydr 93.7 0.051 1.8E-06 45.8 4.0 36 1-37 1-37 (322)
143 3llv_A Exopolyphosphatase-rela 93.7 0.074 2.5E-06 38.4 4.4 31 4-35 7-37 (141)
144 3e8x_A Putative NAD-dependent 93.7 0.46 1.6E-05 36.9 9.3 32 3-35 21-53 (236)
145 2rcy_A Pyrroline carboxylate r 93.6 0.052 1.8E-06 43.4 3.7 26 1-26 2-27 (262)
146 3aog_A Glutamate dehydrogenase 93.6 0.34 1.2E-05 42.8 9.3 34 3-37 235-268 (440)
147 4g2n_A D-isomer specific 2-hyd 93.6 0.073 2.5E-06 45.5 4.7 30 4-34 174-203 (345)
148 3r3j_A Glutamate dehydrogenase 93.5 0.28 9.6E-06 43.6 8.5 103 4-123 240-352 (456)
149 3evt_A Phosphoglycerate dehydr 93.5 0.081 2.8E-06 44.8 4.9 31 4-35 138-168 (324)
150 2pi1_A D-lactate dehydrogenase 93.5 0.074 2.5E-06 45.2 4.6 30 4-34 142-171 (334)
151 3pp8_A Glyoxylate/hydroxypyruv 93.5 0.071 2.4E-06 45.0 4.4 31 4-35 140-170 (315)
152 3ff4_A Uncharacterized protein 93.4 0.25 8.7E-06 35.9 6.9 83 4-126 5-91 (122)
153 4e21_A 6-phosphogluconate dehy 93.4 0.077 2.6E-06 45.4 4.7 39 3-45 22-60 (358)
154 3hg7_A D-isomer specific 2-hyd 93.4 0.08 2.7E-06 44.9 4.6 30 4-34 141-170 (324)
155 1bg6_A N-(1-D-carboxylethyl)-L 93.3 0.084 2.9E-06 44.0 4.7 33 2-36 3-35 (359)
156 2yv1_A Succinyl-COA ligase [AD 93.3 0.16 5.5E-06 42.3 6.3 89 3-125 13-103 (294)
157 3fwz_A Inner membrane protein 93.3 0.1 3.4E-06 38.0 4.5 32 3-35 7-38 (140)
158 2ahr_A Putative pyrroline carb 93.2 0.13 4.4E-06 41.1 5.5 31 4-36 4-34 (259)
159 1qp8_A Formate dehydrogenase; 93.2 0.085 2.9E-06 44.1 4.5 30 4-34 125-154 (303)
160 1xdw_A NAD+-dependent (R)-2-hy 93.1 0.089 3.1E-06 44.5 4.6 30 4-34 147-176 (331)
161 3gg9_A D-3-phosphoglycerate de 93.1 0.091 3.1E-06 45.0 4.6 30 4-34 161-190 (352)
162 2yq5_A D-isomer specific 2-hyd 93.1 0.092 3.2E-06 44.9 4.6 30 4-34 149-178 (343)
163 1dxy_A D-2-hydroxyisocaproate 93.1 0.093 3.2E-06 44.5 4.6 30 4-34 146-175 (333)
164 3gt0_A Pyrroline-5-carboxylate 93.1 0.087 3E-06 42.1 4.2 41 1-45 1-44 (247)
165 1bgv_A Glutamate dehydrogenase 93.0 0.22 7.6E-06 44.1 7.1 103 4-124 231-344 (449)
166 3ew7_A LMO0794 protein; Q8Y8U8 93.0 0.57 2E-05 35.5 8.8 31 4-35 1-32 (221)
167 2g76_A 3-PGDH, D-3-phosphoglyc 93.0 0.1 3.4E-06 44.4 4.7 30 4-34 166-195 (335)
168 1gdh_A D-glycerate dehydrogena 93.0 0.1 3.5E-06 43.9 4.7 30 4-34 147-176 (320)
169 1gtm_A Glutamate dehydrogenase 93.0 0.11 3.9E-06 45.5 5.1 33 4-37 213-246 (419)
170 4dgs_A Dehydrogenase; structur 92.9 0.1 3.6E-06 44.5 4.7 29 4-33 172-200 (340)
171 3ego_A Probable 2-dehydropanto 92.9 0.86 2.9E-05 37.6 10.3 31 1-34 1-31 (307)
172 1mx3_A CTBP1, C-terminal bindi 92.9 0.11 3.6E-06 44.5 4.7 32 4-37 169-200 (347)
173 2r6j_A Eugenol synthase 1; phe 92.8 0.14 4.9E-06 41.7 5.3 31 4-35 12-43 (318)
174 3gvx_A Glycerate dehydrogenase 92.8 0.085 2.9E-06 44.0 3.9 30 4-34 123-152 (290)
175 3jtm_A Formate dehydrogenase, 92.8 0.099 3.4E-06 44.8 4.4 30 4-34 165-194 (351)
176 1lss_A TRK system potassium up 92.8 0.16 5.4E-06 36.0 4.9 30 4-34 5-34 (140)
177 4e5n_A Thermostable phosphite 92.8 0.084 2.9E-06 44.8 3.9 32 4-37 146-177 (330)
178 4hy3_A Phosphoglycerate oxidor 92.7 0.1 3.5E-06 45.0 4.4 32 4-37 177-208 (365)
179 1vpd_A Tartronate semialdehyde 92.7 0.1 3.5E-06 42.5 4.2 31 4-36 6-36 (299)
180 2yv2_A Succinyl-COA synthetase 92.7 0.29 9.8E-06 40.8 7.0 89 3-125 13-104 (297)
181 2cuk_A Glycerate dehydrogenase 92.7 0.12 4E-06 43.4 4.6 30 4-34 145-174 (311)
182 3c24_A Putative oxidoreductase 92.6 0.13 4.6E-06 41.8 4.8 31 4-36 12-43 (286)
183 3kb6_A D-lactate dehydrogenase 92.6 0.12 4.1E-06 43.9 4.6 32 4-37 142-173 (334)
184 1wwk_A Phosphoglycerate dehydr 92.5 0.13 4.4E-06 43.1 4.6 32 4-37 143-174 (307)
185 1j4a_A D-LDH, D-lactate dehydr 92.4 0.13 4.4E-06 43.6 4.6 30 4-34 147-176 (333)
186 2ekl_A D-3-phosphoglycerate de 92.4 0.13 4.5E-06 43.1 4.6 32 4-37 143-174 (313)
187 3cky_A 2-hydroxymethyl glutara 92.3 0.13 4.3E-06 42.0 4.4 32 3-36 4-35 (301)
188 1sc6_A PGDH, D-3-phosphoglycer 92.3 0.13 4.5E-06 44.8 4.6 30 4-34 146-175 (404)
189 1lld_A L-lactate dehydrogenase 92.3 0.17 5.8E-06 41.8 5.1 32 4-36 8-40 (319)
190 3oet_A Erythronate-4-phosphate 92.3 0.14 4.6E-06 44.5 4.6 30 4-34 120-149 (381)
191 2o4c_A Erythronate-4-phosphate 92.2 0.14 4.8E-06 44.4 4.6 31 4-36 117-147 (380)
192 4ezb_A Uncharacterized conserv 92.2 0.17 5.9E-06 42.2 5.1 33 3-36 24-56 (317)
193 2w2k_A D-mandelate dehydrogena 92.1 0.15 5.3E-06 43.3 4.7 31 4-36 164-195 (348)
194 3nkl_A UDP-D-quinovosamine 4-d 92.1 0.24 8.1E-06 35.7 5.2 34 3-36 4-37 (141)
195 3g0o_A 3-hydroxyisobutyrate de 92.1 0.16 5.4E-06 41.8 4.7 37 3-43 7-43 (303)
196 1ff9_A Saccharopine reductase; 92.1 0.22 7.5E-06 43.8 5.8 34 1-36 1-34 (450)
197 3dtt_A NADP oxidoreductase; st 92.1 0.18 6.3E-06 40.2 4.9 32 3-36 19-50 (245)
198 3doj_A AT3G25530, dehydrogenas 92.0 0.18 6.1E-06 41.8 4.9 32 3-36 21-52 (310)
199 3c1o_A Eugenol synthase; pheny 92.0 0.17 5.9E-06 41.2 4.8 31 4-35 5-36 (321)
200 2wtb_A MFP2, fatty acid multif 92.0 0.4 1.4E-05 44.8 7.8 31 4-36 313-343 (725)
201 2vns_A Metalloreductase steap3 91.9 0.16 5.4E-06 39.9 4.3 30 3-33 28-57 (215)
202 4fcc_A Glutamate dehydrogenase 91.9 0.41 1.4E-05 42.4 7.3 102 4-123 236-347 (450)
203 2izz_A Pyrroline-5-carboxylate 91.9 0.14 4.8E-06 42.7 4.2 33 3-36 22-57 (322)
204 4gbj_A 6-phosphogluconate dehy 91.9 0.13 4.6E-06 42.6 4.0 31 4-36 6-36 (297)
205 2gcg_A Glyoxylate reductase/hy 91.8 0.16 5.4E-06 42.8 4.4 30 4-34 156-185 (330)
206 2yfq_A Padgh, NAD-GDH, NAD-spe 91.7 0.33 1.1E-05 42.7 6.5 34 3-37 212-245 (421)
207 3ba1_A HPPR, hydroxyphenylpyru 91.7 0.15 5.1E-06 43.3 4.2 29 4-33 165-193 (333)
208 1v9l_A Glutamate dehydrogenase 91.7 0.86 2.9E-05 40.0 9.2 33 4-37 211-243 (421)
209 2iz1_A 6-phosphogluconate dehy 91.7 0.15 5E-06 45.1 4.3 34 1-36 3-36 (474)
210 2tmg_A Protein (glutamate dehy 91.7 0.56 1.9E-05 41.1 8.0 35 3-37 209-243 (415)
211 3k92_A NAD-GDH, NAD-specific g 91.7 0.43 1.5E-05 42.0 7.2 34 3-37 221-254 (424)
212 4e12_A Diketoreductase; oxidor 91.7 0.21 7.2E-06 40.8 5.0 34 1-36 1-35 (283)
213 2nac_A NAD-dependent formate d 91.6 0.16 5.4E-06 44.2 4.3 30 4-34 192-221 (393)
214 3l6d_A Putative oxidoreductase 91.6 0.17 5.6E-06 42.0 4.3 40 3-46 9-48 (306)
215 1ldn_A L-lactate dehydrogenase 91.5 0.23 7.9E-06 41.5 5.1 34 3-36 6-39 (316)
216 2d0i_A Dehydrogenase; structur 91.5 0.17 5.8E-06 42.8 4.3 32 4-37 147-178 (333)
217 2dbq_A Glyoxylate reductase; D 91.5 0.19 6.5E-06 42.4 4.6 32 4-37 151-182 (334)
218 3mw9_A GDH 1, glutamate dehydr 91.5 2.4 8E-05 38.1 11.8 32 4-36 245-276 (501)
219 2hmt_A YUAA protein; RCK, KTN, 91.4 0.17 5.9E-06 35.9 3.7 30 4-34 7-36 (144)
220 2z2v_A Hypothetical protein PH 91.4 0.14 4.7E-06 43.9 3.7 93 3-126 16-108 (365)
221 3qha_A Putative oxidoreductase 91.4 0.14 4.7E-06 42.2 3.5 32 3-36 15-46 (296)
222 2uyy_A N-PAC protein; long-cha 91.3 0.19 6.6E-06 41.3 4.4 32 3-36 30-61 (316)
223 3gpi_A NAD-dependent epimerase 91.3 0.21 7.2E-06 40.0 4.5 34 1-35 1-34 (286)
224 4dll_A 2-hydroxy-3-oxopropiona 91.3 0.21 7.2E-06 41.6 4.6 31 4-36 32-62 (320)
225 2g1u_A Hypothetical protein TM 91.3 0.32 1.1E-05 35.8 5.2 31 3-34 19-49 (155)
226 2h78_A Hibadh, 3-hydroxyisobut 91.1 0.2 6.9E-06 41.0 4.3 36 4-43 4-39 (302)
227 3c85_A Putative glutathione-re 91.1 0.19 6.5E-06 37.9 3.8 32 4-35 40-71 (183)
228 3k5p_A D-3-phosphoglycerate de 91.1 0.21 7.3E-06 43.8 4.6 30 4-34 157-186 (416)
229 2x0j_A Malate dehydrogenase; o 91.1 0.54 1.8E-05 39.2 6.9 34 4-37 1-34 (294)
230 3qsg_A NAD-binding phosphogluc 91.1 0.17 5.9E-06 42.0 3.9 33 3-36 24-56 (312)
231 2cvz_A Dehydrogenase, 3-hydrox 91.0 0.17 5.7E-06 40.9 3.7 30 4-36 2-31 (289)
232 2g5c_A Prephenate dehydrogenas 91.0 0.26 8.8E-06 39.8 4.8 32 4-36 2-34 (281)
233 4gwg_A 6-phosphogluconate dehy 91.0 0.18 6.3E-06 45.0 4.2 42 1-46 2-43 (484)
234 2j6i_A Formate dehydrogenase; 90.9 0.19 6.6E-06 43.1 4.1 30 4-34 165-195 (364)
235 1evy_A Glycerol-3-phosphate de 90.9 0.2 6.7E-06 42.3 4.1 29 5-34 17-45 (366)
236 1y1p_A ARII, aldehyde reductas 90.8 3 0.0001 33.6 11.2 32 3-35 11-43 (342)
237 2zyd_A 6-phosphogluconate dehy 90.8 0.2 6.8E-06 44.5 4.2 33 1-34 13-45 (480)
238 3obb_A Probable 3-hydroxyisobu 90.7 0.24 8.2E-06 41.2 4.4 31 4-36 4-34 (300)
239 3pef_A 6-phosphogluconate dehy 90.7 0.27 9.4E-06 40.0 4.7 31 4-36 2-32 (287)
240 3d4o_A Dipicolinate synthase s 90.7 0.29 9.9E-06 40.2 4.9 30 4-34 156-185 (293)
241 3dfz_A SIRC, precorrin-2 dehyd 90.6 1.6 5.4E-05 34.9 9.1 30 4-34 32-61 (223)
242 3ghy_A Ketopantoate reductase 90.6 0.23 7.9E-06 41.5 4.3 33 1-34 1-33 (335)
243 3l4b_C TRKA K+ channel protien 90.6 0.2 6.9E-06 39.0 3.7 31 4-35 1-31 (218)
244 2o3j_A UDP-glucose 6-dehydroge 90.6 0.2 6.8E-06 44.4 4.0 33 2-34 8-41 (481)
245 3oj0_A Glutr, glutamyl-tRNA re 90.5 0.17 5.8E-06 36.8 3.0 31 4-36 22-52 (144)
246 2q3e_A UDP-glucose 6-dehydroge 90.5 0.21 7.1E-06 44.0 4.0 35 1-36 2-38 (467)
247 2rir_A Dipicolinate synthase, 90.4 0.31 1.1E-05 40.1 4.9 31 4-36 158-188 (300)
248 3hwr_A 2-dehydropantoate 2-red 90.4 1.8 6.3E-05 35.7 9.7 30 3-33 19-48 (318)
249 2gas_A Isoflavone reductase; N 90.3 0.21 7.3E-06 40.2 3.7 31 4-35 3-34 (307)
250 2ph5_A Homospermidine synthase 90.2 0.28 9.5E-06 43.9 4.6 99 3-126 13-114 (480)
251 1yb4_A Tartronic semialdehyde 90.1 0.19 6.4E-06 40.7 3.2 30 4-34 4-33 (295)
252 3aoe_E Glutamate dehydrogenase 90.0 0.46 1.6E-05 41.7 5.7 34 3-37 218-251 (419)
253 3pdu_A 3-hydroxyisobutyrate de 89.9 0.2 6.8E-06 40.8 3.2 31 4-36 2-32 (287)
254 3ldh_A Lactate dehydrogenase; 89.7 1.3 4.5E-05 37.5 8.3 33 4-36 22-54 (330)
255 1i36_A Conserved hypothetical 89.7 0.36 1.2E-05 38.5 4.6 31 4-36 1-31 (264)
256 3pqe_A L-LDH, L-lactate dehydr 89.7 0.34 1.2E-05 40.9 4.6 34 3-36 5-38 (326)
257 3two_A Mannitol dehydrogenase; 89.7 1.1 3.6E-05 37.4 7.7 129 4-168 178-308 (348)
258 2f1k_A Prephenate dehydrogenas 89.7 0.37 1.3E-05 38.8 4.6 88 4-126 1-91 (279)
259 3jv7_A ADH-A; dehydrogenase, n 89.6 2 6.8E-05 35.6 9.2 130 4-168 173-310 (345)
260 3nep_X Malate dehydrogenase; h 89.6 1 3.5E-05 37.8 7.4 34 4-37 1-34 (314)
261 3slg_A PBGP3 protein; structur 89.5 0.34 1.2E-05 40.3 4.4 35 1-35 22-57 (372)
262 3gg2_A Sugar dehydrogenase, UD 89.3 0.38 1.3E-05 42.4 4.7 41 1-46 1-41 (450)
263 2raf_A Putative dinucleotide-b 89.3 0.43 1.5E-05 37.2 4.6 30 3-33 19-48 (209)
264 1ygy_A PGDH, D-3-phosphoglycer 89.3 0.37 1.3E-05 43.3 4.7 34 4-39 143-176 (529)
265 1ur5_A Malate dehydrogenase; o 88.9 0.53 1.8E-05 39.1 5.1 35 1-37 1-35 (309)
266 1yqg_A Pyrroline-5-carboxylate 88.6 0.58 2E-05 37.2 5.0 32 4-36 1-32 (263)
267 1jay_A Coenzyme F420H2:NADP+ o 88.4 0.63 2.1E-05 35.7 5.0 30 4-34 1-31 (212)
268 2gf2_A Hibadh, 3-hydroxyisobut 88.3 0.37 1.3E-05 39.1 3.7 31 4-36 1-31 (296)
269 2i99_A MU-crystallin homolog; 88.2 0.63 2.1E-05 38.7 5.1 33 4-36 136-168 (312)
270 3dfu_A Uncharacterized protein 88.0 0.18 6.1E-06 40.8 1.6 33 3-36 6-38 (232)
271 2pv7_A T-protein [includes: ch 88.0 0.51 1.7E-05 38.8 4.4 29 4-33 22-51 (298)
272 1leh_A Leucine dehydrogenase; 87.9 0.78 2.7E-05 39.4 5.7 36 4-43 174-209 (364)
273 3c7a_A Octopine dehydrogenase; 87.8 0.51 1.7E-05 40.3 4.5 33 1-34 1-33 (404)
274 1x0v_A GPD-C, GPDH-C, glycerol 87.8 0.33 1.1E-05 40.4 3.2 25 1-25 6-30 (354)
275 1hdo_A Biliverdin IX beta redu 87.7 0.84 2.9E-05 34.1 5.2 34 1-35 1-35 (206)
276 1ks9_A KPA reductase;, 2-dehyd 87.7 0.61 2.1E-05 37.3 4.6 30 4-34 1-30 (291)
277 4aj2_A L-lactate dehydrogenase 87.6 1.9 6.5E-05 36.4 7.8 34 3-36 19-52 (331)
278 3d64_A Adenosylhomocysteinase; 87.5 0.58 2E-05 41.9 4.7 31 4-36 278-308 (494)
279 3fpc_A NADP-dependent alcohol 87.5 2.4 8.1E-05 35.3 8.3 93 4-119 168-261 (352)
280 2yjz_A Metalloreductase steap4 87.1 0.11 3.9E-06 40.5 0.0 30 3-33 19-48 (201)
281 2dpo_A L-gulonate 3-dehydrogen 87.1 0.6 2.1E-05 39.2 4.4 40 3-46 6-45 (319)
282 1f0y_A HCDH, L-3-hydroxyacyl-C 87.1 0.75 2.6E-05 37.6 4.9 32 3-36 15-46 (302)
283 1c1d_A L-phenylalanine dehydro 86.9 0.73 2.5E-05 39.5 4.9 32 4-37 176-207 (355)
284 3zwc_A Peroxisomal bifunctiona 86.8 1.5 5E-05 41.2 7.2 143 4-171 317-486 (742)
285 3l9w_A Glutathione-regulated p 86.6 0.86 2.9E-05 39.6 5.3 36 4-43 5-40 (413)
286 3g79_A NDP-N-acetyl-D-galactos 86.6 0.69 2.4E-05 41.2 4.7 32 3-34 18-50 (478)
287 4h7p_A Malate dehydrogenase; s 86.4 1.7 5.7E-05 37.1 6.8 26 1-26 22-48 (345)
288 3d0o_A L-LDH 1, L-lactate dehy 86.4 0.75 2.6E-05 38.4 4.6 35 2-36 5-39 (317)
289 1np3_A Ketol-acid reductoisome 86.3 0.64 2.2E-05 39.1 4.2 31 4-36 17-47 (338)
290 3ktd_A Prephenate dehydrogenas 86.2 0.65 2.2E-05 39.4 4.2 36 4-43 9-44 (341)
291 1z82_A Glycerol-3-phosphate de 86.1 0.81 2.8E-05 38.0 4.7 31 3-34 14-44 (335)
292 1v8b_A Adenosylhomocysteinase; 86.0 0.58 2E-05 41.8 3.9 31 4-36 258-288 (479)
293 3i83_A 2-dehydropantoate 2-red 85.9 0.85 2.9E-05 37.7 4.7 33 1-35 1-33 (320)
294 2qyt_A 2-dehydropantoate 2-red 85.7 0.54 1.9E-05 38.2 3.3 32 3-34 8-44 (317)
295 3phh_A Shikimate dehydrogenase 85.6 7.2 0.00025 31.9 10.1 31 4-35 119-149 (269)
296 3h9u_A Adenosylhomocysteinase; 85.4 0.86 2.9E-05 40.2 4.6 31 4-36 212-242 (436)
297 3r6d_A NAD-dependent epimerase 85.3 1 3.6E-05 34.5 4.7 33 2-35 4-38 (221)
298 2fp4_A Succinyl-COA ligase [GD 85.2 1.8 6.2E-05 36.1 6.4 86 4-123 14-101 (305)
299 3pid_A UDP-glucose 6-dehydroge 85.0 0.96 3.3E-05 39.8 4.8 39 3-46 36-74 (432)
300 1yqd_A Sinapyl alcohol dehydro 85.0 0.82 2.8E-05 38.5 4.2 133 4-168 189-322 (366)
301 3n58_A Adenosylhomocysteinase; 84.9 0.93 3.2E-05 40.3 4.6 29 4-33 248-276 (464)
302 4g65_A TRK system potassium up 84.8 0.94 3.2E-05 39.9 4.7 40 3-46 3-42 (461)
303 1omo_A Alanine dehydrogenase; 84.8 1.2 4.1E-05 37.2 5.2 33 4-36 126-158 (322)
304 4ej6_A Putative zinc-binding d 84.4 4.8 0.00016 33.8 8.8 94 4-119 184-279 (370)
305 2pgd_A 6-phosphogluconate dehy 84.4 0.82 2.8E-05 40.4 4.1 31 4-36 3-33 (482)
306 4dvj_A Putative zinc-dependent 84.0 1.2 4.1E-05 37.5 4.8 94 4-121 173-267 (363)
307 1txg_A Glycerol-3-phosphate de 84.0 0.91 3.1E-05 37.2 4.0 30 4-34 1-30 (335)
308 1zej_A HBD-9, 3-hydroxyacyl-CO 83.9 1.2 4.1E-05 37.0 4.7 74 4-106 13-86 (293)
309 1piw_A Hypothetical zinc-type 83.9 3.5 0.00012 34.4 7.7 129 4-168 181-316 (360)
310 3p7m_A Malate dehydrogenase; p 83.9 1.8 6.1E-05 36.3 5.8 35 1-36 3-37 (321)
311 3m2p_A UDP-N-acetylglucosamine 83.9 1.4 4.6E-05 35.6 5.0 33 1-35 1-34 (311)
312 3hn2_A 2-dehydropantoate 2-red 83.6 0.84 2.9E-05 37.6 3.6 33 1-35 1-33 (312)
313 3g17_A Similar to 2-dehydropan 83.5 0.65 2.2E-05 38.0 2.9 31 1-33 1-31 (294)
314 2hun_A 336AA long hypothetical 83.5 1.1 3.9E-05 36.3 4.4 35 1-35 1-37 (336)
315 1pgj_A 6PGDH, 6-PGDH, 6-phosph 83.5 0.92 3.1E-05 40.1 4.0 31 4-36 2-32 (478)
316 1xq6_A Unknown protein; struct 83.4 1.8 6.1E-05 33.3 5.3 35 1-35 2-38 (253)
317 3goh_A Alcohol dehydrogenase, 83.3 1.6 5.4E-05 35.7 5.2 30 4-34 144-173 (315)
318 2hjr_A Malate dehydrogenase; m 83.1 1.9 6.3E-05 36.2 5.6 34 3-37 14-47 (328)
319 4g65_A TRK system potassium up 83.0 0.79 2.7E-05 40.4 3.4 94 4-124 236-332 (461)
320 3q2o_A Phosphoribosylaminoimid 83.0 1.6 5.4E-05 36.9 5.2 30 4-34 15-44 (389)
321 2ewd_A Lactate dehydrogenase,; 82.5 1.6 5.6E-05 36.0 5.0 36 1-37 1-37 (317)
322 4a2c_A Galactitol-1-phosphate 82.4 6 0.0002 32.5 8.5 94 4-119 162-255 (346)
323 2p4q_A 6-phosphogluconate dehy 82.4 1.1 3.9E-05 39.8 4.2 31 3-34 10-40 (497)
324 3k96_A Glycerol-3-phosphate de 82.4 1.4 4.6E-05 37.5 4.5 30 3-33 29-58 (356)
325 3k5i_A Phosphoribosyl-aminoimi 82.3 1.8 6.1E-05 37.1 5.3 33 3-36 24-56 (403)
326 1mv8_A GMD, GDP-mannose 6-dehy 82.2 1.2 4.1E-05 38.6 4.2 36 4-43 1-36 (436)
327 1zcj_A Peroxisomal bifunctiona 82.1 1.6 5.5E-05 38.3 5.0 32 3-36 37-68 (463)
328 3mwd_B ATP-citrate synthase; A 82.1 3.8 0.00013 34.8 7.1 97 3-125 10-113 (334)
329 3eag_A UDP-N-acetylmuramate:L- 82.0 6.9 0.00024 32.3 8.7 87 4-119 5-92 (326)
330 3gvp_A Adenosylhomocysteinase 81.7 1.5 5.1E-05 38.7 4.6 31 4-36 221-251 (435)
331 2axq_A Saccharopine dehydrogen 81.6 1.5 5.1E-05 38.8 4.6 32 3-34 23-54 (467)
332 3ip1_A Alcohol dehydrogenase, 81.5 6.6 0.00023 33.3 8.6 30 4-34 215-245 (404)
333 1dlj_A UDP-glucose dehydrogena 81.3 1.4 4.8E-05 37.9 4.3 28 4-33 1-28 (402)
334 3mog_A Probable 3-hydroxybutyr 81.2 1.4 4.7E-05 39.2 4.3 39 3-45 5-43 (483)
335 2d5c_A AROE, shikimate 5-dehyd 81.2 1.5 5E-05 35.2 4.1 30 5-36 118-147 (263)
336 3orq_A N5-carboxyaminoimidazol 81.1 2 6.9E-05 36.3 5.2 31 3-34 12-42 (377)
337 1uuf_A YAHK, zinc-type alcohol 80.9 2.3 7.8E-05 35.8 5.4 133 4-168 196-329 (369)
338 1e6u_A GDP-fucose synthetase; 80.9 1.4 4.9E-05 35.5 4.0 33 1-34 1-34 (321)
339 2dq4_A L-threonine 3-dehydroge 80.0 3.3 0.00011 34.2 6.1 136 4-169 166-305 (343)
340 2csu_A 457AA long hypothetical 79.9 8 0.00027 33.8 8.8 83 3-123 8-94 (457)
341 3h2s_A Putative NADH-flavin re 79.8 2.4 8.4E-05 32.1 4.8 31 4-35 1-32 (224)
342 3uog_A Alcohol dehydrogenase; 79.6 4.5 0.00015 33.8 6.8 141 4-173 191-332 (363)
343 1yj8_A Glycerol-3-phosphate de 79.2 1.2 4.2E-05 37.6 3.1 22 4-25 22-43 (375)
344 1x7d_A Ornithine cyclodeaminas 79.2 2.2 7.7E-05 36.1 4.8 33 4-36 130-162 (350)
345 3ruf_A WBGU; rossmann fold, UD 78.9 2.1 7.2E-05 35.0 4.5 33 2-35 24-57 (351)
346 1xa0_A Putative NADPH dependen 78.8 5.7 0.0002 32.4 7.1 31 5-36 152-183 (328)
347 3gvi_A Malate dehydrogenase; N 78.7 2.6 8.8E-05 35.4 5.0 35 1-36 5-39 (324)
348 4b4o_A Epimerase family protei 78.6 2.6 8.9E-05 33.7 4.8 30 4-34 1-31 (298)
349 3h8v_A Ubiquitin-like modifier 78.5 1.4 4.7E-05 36.7 3.2 33 3-36 36-68 (292)
350 2vhw_A Alanine dehydrogenase; 78.4 2.4 8.3E-05 36.1 4.8 31 4-36 169-199 (377)
351 2d8a_A PH0655, probable L-thre 78.3 3.2 0.00011 34.4 5.4 138 4-169 169-310 (348)
352 3m6i_A L-arabinitol 4-dehydrog 78.1 11 0.00037 31.3 8.7 30 4-34 181-211 (363)
353 2b5w_A Glucose dehydrogenase; 78.0 5.6 0.00019 33.1 6.9 31 4-35 174-207 (357)
354 3ado_A Lambda-crystallin; L-gu 77.7 3.3 0.00011 34.8 5.4 32 4-37 7-38 (319)
355 3fi9_A Malate dehydrogenase; s 77.6 2.6 8.7E-05 35.8 4.7 35 1-36 6-42 (343)
356 3ce6_A Adenosylhomocysteinase; 77.6 2.4 8E-05 37.9 4.6 31 4-36 275-305 (494)
357 1pjq_A CYSG, siroheme synthase 77.3 12 0.00042 32.6 9.1 94 4-127 13-107 (457)
358 3k6j_A Protein F01G10.3, confi 77.3 2.8 9.5E-05 37.1 4.9 32 3-36 54-85 (460)
359 3hdj_A Probable ornithine cycl 77.2 3.1 0.00011 34.7 5.0 39 4-43 122-160 (313)
360 1y6j_A L-lactate dehydrogenase 77.2 2.7 9.4E-05 35.0 4.7 34 3-36 7-40 (318)
361 2hk9_A Shikimate dehydrogenase 77.1 2.2 7.5E-05 34.5 4.0 31 4-36 130-160 (275)
362 2a35_A Hypothetical protein PA 77.0 2.3 7.9E-05 32.0 3.9 32 3-34 5-38 (215)
363 1hyh_A L-hicdh, L-2-hydroxyiso 77.0 3 0.0001 34.3 4.8 32 4-36 2-34 (309)
364 3qwb_A Probable quinone oxidor 76.8 6.1 0.00021 32.4 6.7 31 4-35 150-181 (334)
365 3uko_A Alcohol dehydrogenase c 76.8 6 0.0002 33.1 6.8 30 4-34 195-225 (378)
366 2y0c_A BCEC, UDP-glucose dehyd 76.6 2.7 9.1E-05 37.1 4.7 40 3-46 8-47 (478)
367 1oc2_A DTDP-glucose 4,6-dehydr 76.4 2.7 9.1E-05 34.2 4.4 35 1-35 1-38 (348)
368 2cf5_A Atccad5, CAD, cinnamyl 76.4 2.2 7.4E-05 35.7 3.9 31 4-35 182-212 (357)
369 3h5n_A MCCB protein; ubiquitin 76.4 4.7 0.00016 34.1 6.0 33 3-36 118-150 (353)
370 3vps_A TUNA, NAD-dependent epi 76.2 3 0.0001 33.3 4.5 32 3-35 7-39 (321)
371 4b8w_A GDP-L-fucose synthase; 76.1 2.4 8.1E-05 33.6 3.9 26 1-26 4-30 (319)
372 3p2y_A Alanine dehydrogenase/p 75.4 3.7 0.00013 35.5 5.1 31 4-36 185-215 (381)
373 4egb_A DTDP-glucose 4,6-dehydr 75.4 2.8 9.5E-05 34.2 4.2 34 3-36 24-59 (346)
374 3fr7_A Putative ketol-acid red 75.2 3.4 0.00012 37.2 4.9 32 4-35 55-91 (525)
375 3sc6_A DTDP-4-dehydrorhamnose 75.2 2.1 7.3E-05 33.8 3.4 31 4-35 6-37 (287)
376 3tl2_A Malate dehydrogenase; c 75.0 4.3 0.00015 33.9 5.3 33 3-36 8-40 (315)
377 3jyn_A Quinone oxidoreductase; 74.9 4.7 0.00016 33.0 5.5 31 4-35 142-173 (325)
378 3ouz_A Biotin carboxylase; str 74.6 2.7 9.1E-05 36.2 4.1 33 1-34 4-36 (446)
379 1pzg_A LDH, lactate dehydrogen 74.3 3.8 0.00013 34.2 4.9 33 4-37 10-42 (331)
380 2y1e_A 1-deoxy-D-xylulose 5-ph 74.2 4 0.00014 35.5 4.9 111 4-125 22-136 (398)
381 3gqv_A Enoyl reductase; medium 74.2 11 0.00039 31.4 7.8 31 4-35 166-197 (371)
382 1e3j_A NADP(H)-dependent ketos 74.0 16 0.00055 30.0 8.7 30 4-34 170-199 (352)
383 2aef_A Calcium-gated potassium 74.0 1.9 6.4E-05 33.7 2.7 31 3-36 9-39 (234)
384 1a5z_A L-lactate dehydrogenase 73.9 3.8 0.00013 33.9 4.8 32 4-36 1-33 (319)
385 2wm3_A NMRA-like family domain 73.9 3.4 0.00012 33.0 4.3 33 3-35 5-38 (299)
386 2b69_A UDP-glucuronate decarbo 73.8 4.2 0.00014 33.1 4.9 32 3-35 27-59 (343)
387 2vn8_A Reticulon-4-interacting 73.7 6.1 0.00021 33.1 6.0 31 4-35 185-216 (375)
388 1x13_A NAD(P) transhydrogenase 73.6 3.5 0.00012 35.5 4.6 31 4-36 173-203 (401)
389 3st7_A Capsular polysaccharide 73.5 3.6 0.00012 34.0 4.5 44 4-48 1-45 (369)
390 1p0f_A NADP-dependent alcohol 73.4 8.1 0.00028 32.2 6.7 30 4-34 193-223 (373)
391 2yy7_A L-threonine dehydrogena 73.2 2.8 9.5E-05 33.5 3.6 34 1-35 1-36 (312)
392 1q0q_A 1-deoxy-D-xylulose 5-ph 73.1 4.3 0.00015 35.4 4.9 112 4-125 10-132 (406)
393 3vku_A L-LDH, L-lactate dehydr 73.0 3.9 0.00013 34.4 4.6 34 3-36 9-42 (326)
394 3krt_A Crotonyl COA reductase; 72.5 6 0.00021 34.2 5.8 39 4-46 230-269 (456)
395 1f8f_A Benzyl alcohol dehydrog 72.3 3.5 0.00012 34.5 4.2 30 4-34 192-222 (371)
396 1rjw_A ADH-HT, alcohol dehydro 72.1 5.8 0.0002 32.7 5.5 30 4-34 166-195 (339)
397 1gpj_A Glutamyl-tRNA reductase 72.1 3.4 0.00012 35.5 4.1 30 4-34 168-198 (404)
398 1l7d_A Nicotinamide nucleotide 71.9 4.1 0.00014 34.6 4.6 32 4-37 173-204 (384)
399 3lk7_A UDP-N-acetylmuramoylala 71.9 18 0.00062 31.2 8.8 86 4-119 10-98 (451)
400 1sb8_A WBPP; epimerase, 4-epim 71.9 4.1 0.00014 33.3 4.5 32 3-35 27-59 (352)
401 2ydy_A Methionine adenosyltran 71.8 5 0.00017 32.1 4.9 32 1-34 1-33 (315)
402 2jhf_A Alcohol dehydrogenase E 71.4 15 0.00051 30.5 7.9 30 4-34 193-223 (374)
403 1y7t_A Malate dehydrogenase; N 71.2 4.5 0.00016 33.4 4.6 34 1-34 1-42 (327)
404 3kkj_A Amine oxidase, flavin-c 71.0 4.7 0.00016 29.7 4.3 32 2-34 1-32 (336)
405 3s2e_A Zinc-containing alcohol 70.9 4.8 0.00017 33.1 4.7 133 4-168 168-303 (340)
406 2eez_A Alanine dehydrogenase; 70.9 5 0.00017 33.9 4.9 31 4-36 167-197 (369)
407 1ez4_A Lactate dehydrogenase; 70.9 4.3 0.00015 33.8 4.4 34 3-36 5-38 (318)
408 1oju_A MDH, malate dehydrogena 70.8 5 0.00017 33.1 4.7 33 4-36 1-33 (294)
409 4ea9_A Perosamine N-acetyltran 70.7 5.6 0.00019 30.7 4.8 33 3-36 12-44 (220)
410 2x4g_A Nucleoside-diphosphate- 70.6 5.8 0.0002 32.0 5.0 31 4-35 14-45 (342)
411 1vj0_A Alcohol dehydrogenase, 70.6 5 0.00017 33.7 4.8 140 4-168 197-341 (380)
412 3sxp_A ADP-L-glycero-D-mannohe 70.5 4.8 0.00016 33.1 4.6 33 3-35 10-44 (362)
413 2c20_A UDP-glucose 4-epimerase 70.5 5.6 0.00019 32.0 4.9 31 4-35 2-33 (330)
414 1e3i_A Alcohol dehydrogenase, 70.4 11 0.00038 31.4 6.9 30 4-34 197-227 (376)
415 2z1m_A GDP-D-mannose dehydrata 70.3 5.3 0.00018 32.2 4.7 34 1-35 1-35 (345)
416 2bll_A Protein YFBG; decarboxy 70.2 5.8 0.0002 32.0 5.0 31 5-35 2-33 (345)
417 3au8_A 1-deoxy-D-xylulose 5-ph 70.2 5.9 0.0002 35.2 5.1 113 3-125 77-204 (488)
418 4e4t_A Phosphoribosylaminoimid 70.0 5.4 0.00018 34.3 4.9 30 4-34 36-65 (419)
419 1b8p_A Protein (malate dehydro 69.9 4.8 0.00016 33.5 4.4 24 3-26 5-29 (329)
420 2v6b_A L-LDH, L-lactate dehydr 69.8 6 0.00021 32.5 5.0 33 4-36 1-33 (304)
421 1ek6_A UDP-galactose 4-epimera 69.2 6.1 0.00021 32.0 4.9 33 1-35 1-34 (348)
422 4dio_A NAD(P) transhydrogenase 69.2 5.1 0.00017 34.9 4.6 32 4-37 191-222 (405)
423 2fzw_A Alcohol dehydrogenase c 69.2 12 0.0004 31.2 6.8 30 4-34 192-222 (373)
424 2zqz_A L-LDH, L-lactate dehydr 68.9 5.5 0.00019 33.3 4.6 34 3-36 9-42 (326)
425 3nx4_A Putative oxidoreductase 68.9 10 0.00034 30.8 6.2 30 5-35 149-179 (324)
426 2bka_A CC3, TAT-interacting pr 68.5 4.7 0.00016 30.9 3.9 33 3-35 18-52 (242)
427 1guz_A Malate dehydrogenase; o 68.5 6.2 0.00021 32.5 4.8 32 4-36 1-33 (310)
428 2jv8_A Uncharacterized protein 68.2 4.1 0.00014 25.8 2.7 33 56-90 8-40 (73)
429 1cdo_A Alcohol dehydrogenase; 68.1 16 0.00054 30.4 7.4 30 4-34 194-224 (374)
430 3fbg_A Putative arginate lyase 67.5 6.8 0.00023 32.4 4.9 90 4-118 152-242 (346)
431 1t2a_A GDP-mannose 4,6 dehydra 67.4 7 0.00024 32.2 5.0 31 4-35 25-56 (375)
432 1pl8_A Human sorbitol dehydrog 67.4 6.6 0.00022 32.6 4.8 30 4-34 173-203 (356)
433 1orr_A CDP-tyvelose-2-epimeras 67.3 6.6 0.00023 31.7 4.7 30 4-34 2-32 (347)
434 4a7p_A UDP-glucose dehydrogena 67.2 6 0.00021 34.7 4.7 31 3-34 8-38 (446)
435 1y8q_B Anthracycline-, ubiquit 67.2 7.6 0.00026 35.8 5.5 102 4-111 18-126 (640)
436 3ax6_A Phosphoribosylaminoimid 66.6 7.6 0.00026 32.4 5.1 31 4-35 2-32 (380)
437 3gms_A Putative NADPH:quinone 66.3 5.9 0.0002 32.6 4.3 31 4-35 146-177 (340)
438 2q1s_A Putative nucleotide sug 66.3 7 0.00024 32.4 4.8 32 4-35 33-65 (377)
439 2q1w_A Putative nucleotide sug 66.2 7.7 0.00026 31.5 4.9 32 3-35 21-53 (333)
440 3bfp_A Acetyltransferase; LEFT 66.2 5.5 0.00019 30.3 3.8 35 1-36 1-35 (194)
441 2eih_A Alcohol dehydrogenase; 65.8 18 0.00063 29.6 7.2 137 4-169 168-307 (343)
442 1rkx_A CDP-glucose-4,6-dehydra 65.7 6.6 0.00022 32.1 4.4 32 3-35 9-41 (357)
443 4dim_A Phosphoribosylglycinami 65.1 6.6 0.00023 32.9 4.4 34 2-36 6-39 (403)
444 3hhp_A Malate dehydrogenase; M 65.0 7.1 0.00024 32.5 4.5 33 4-36 1-35 (312)
445 1smk_A Malate dehydrogenase, g 64.9 7.2 0.00025 32.4 4.6 33 3-36 8-42 (326)
446 2c5a_A GDP-mannose-3', 5'-epim 64.6 9.1 0.00031 31.7 5.2 32 3-35 29-61 (379)
447 2cdc_A Glucose dehydrogenase g 64.3 5.6 0.00019 33.1 3.8 31 4-35 182-212 (366)
448 3vtf_A UDP-glucose 6-dehydroge 64.3 5.9 0.0002 34.9 4.0 38 3-44 21-58 (444)
449 1wdk_A Fatty oxidation complex 63.9 4.9 0.00017 37.3 3.6 32 3-36 314-345 (715)
450 1xgk_A Nitrogen metabolite rep 63.5 8.2 0.00028 32.0 4.7 32 3-35 5-37 (352)
451 3ay3_A NAD-dependent epimerase 63.5 2.9 9.8E-05 32.9 1.7 32 1-34 1-33 (267)
452 1tt7_A YHFP; alcohol dehydroge 63.4 4.9 0.00017 32.9 3.2 31 5-36 153-184 (330)
453 4hb9_A Similarities with proba 63.2 8.7 0.0003 31.5 4.7 29 4-33 2-30 (412)
454 2x6t_A ADP-L-glycero-D-manno-h 63.2 7.8 0.00027 31.7 4.4 32 4-35 47-79 (357)
455 4ffl_A PYLC; amino acid, biosy 63.1 9.8 0.00034 31.4 5.1 30 4-34 2-31 (363)
456 1n7h_A GDP-D-mannose-4,6-dehyd 63.1 9.4 0.00032 31.5 5.0 31 4-35 29-60 (381)
457 1o6z_A MDH, malate dehydrogena 62.9 9.8 0.00033 31.2 5.0 33 4-36 1-34 (303)
458 4eez_A Alcohol dehydrogenase 1 62.7 15 0.0005 30.1 6.0 138 4-168 165-303 (348)
459 4eye_A Probable oxidoreductase 62.7 12 0.00042 30.8 5.6 31 4-35 161-192 (342)
460 1kew_A RMLB;, DTDP-D-glucose 4 62.5 7.8 0.00027 31.5 4.3 31 5-35 2-33 (361)
461 2xxj_A L-LDH, L-lactate dehydr 62.1 10 0.00036 31.3 5.0 33 4-36 1-33 (310)
462 3tqh_A Quinone oxidoreductase; 61.9 5.5 0.00019 32.5 3.2 31 4-35 154-185 (321)
463 2hrz_A AGR_C_4963P, nucleoside 61.3 7.7 0.00026 31.4 4.0 33 2-34 13-52 (342)
464 2i6t_A Ubiquitin-conjugating e 60.9 8.8 0.0003 31.7 4.3 33 4-36 15-47 (303)
465 3ehe_A UDP-glucose 4-epimerase 60.7 7.5 0.00026 31.1 3.8 31 4-36 2-33 (313)
466 4gx0_A TRKA domain protein; me 60.7 8.4 0.00029 34.1 4.5 31 4-35 349-379 (565)
467 1mld_A Malate dehydrogenase; o 60.3 9.6 0.00033 31.5 4.5 33 4-36 1-34 (314)
468 2pzm_A Putative nucleotide sug 60.3 11 0.00039 30.4 4.9 32 3-35 20-52 (330)
469 1hye_A L-lactate/malate dehydr 60.2 11 0.00039 30.9 4.9 33 4-36 1-34 (313)
470 3pi7_A NADH oxidoreductase; gr 59.9 20 0.00069 29.4 6.4 30 5-35 167-197 (349)
471 3enk_A UDP-glucose 4-epimerase 59.8 12 0.00042 30.1 5.0 32 3-35 5-37 (341)
472 1rpn_A GDP-mannose 4,6-dehydra 59.7 12 0.0004 30.1 4.8 32 3-35 14-46 (335)
473 2z04_A Phosphoribosylaminoimid 59.4 9.8 0.00033 31.4 4.4 30 4-34 2-31 (365)
474 1z7e_A Protein aRNA; rossmann 59.2 11 0.00036 34.2 4.9 33 3-35 315-348 (660)
475 3oh8_A Nucleoside-diphosphate 59.1 12 0.0004 32.9 5.0 32 3-35 147-179 (516)
476 2r85_A PURP protein PF1517; AT 58.7 10 0.00035 30.6 4.3 31 2-34 1-31 (334)
477 3ko8_A NAD-dependent epimerase 58.7 12 0.0004 29.7 4.6 31 4-35 1-32 (312)
478 4hv4_A UDP-N-acetylmuramate--L 58.6 39 0.0013 29.5 8.4 83 4-118 23-106 (494)
479 2pn1_A Carbamoylphosphate synt 58.1 9.1 0.00031 31.0 3.9 33 1-34 2-35 (331)
480 3rft_A Uronate dehydrogenase; 58.1 8.5 0.00029 30.3 3.7 33 1-34 1-34 (267)
481 2rh8_A Anthocyanidin reductase 58.1 13 0.00043 30.0 4.8 31 4-35 10-41 (338)
482 2bi7_A UDP-galactopyranose mut 57.9 13 0.00044 31.3 5.0 33 1-34 1-33 (384)
483 4a9w_A Monooxygenase; baeyer-v 57.6 11 0.00038 30.1 4.3 33 1-34 1-33 (357)
484 2egg_A AROE, shikimate 5-dehyd 57.2 15 0.00052 30.0 5.2 30 4-34 142-172 (297)
485 1pjc_A Protein (L-alanine dehy 57.1 13 0.00046 31.1 4.9 30 4-34 168-197 (361)
486 1nyt_A Shikimate 5-dehydrogena 56.8 15 0.0005 29.5 4.9 30 4-34 120-149 (271)
487 4a0s_A Octenoyl-COA reductase/ 56.8 30 0.001 29.5 7.2 39 4-46 222-261 (447)
488 1kjq_A GART 2, phosphoribosylg 56.4 15 0.00052 30.4 5.1 32 3-35 11-42 (391)
489 4dup_A Quinone oxidoreductase; 56.1 14 0.00048 30.5 4.9 30 4-34 169-199 (353)
490 4id9_A Short-chain dehydrogena 56.0 12 0.0004 30.3 4.3 32 3-35 19-51 (347)
491 2dwc_A PH0318, 433AA long hypo 56.0 15 0.0005 31.2 5.0 31 4-35 20-50 (433)
492 1jw9_B Molybdopterin biosynthe 55.9 16 0.00055 29.0 5.0 32 4-36 32-63 (249)
493 1vkz_A Phosphoribosylamine--gl 55.8 14 0.00049 31.2 4.9 31 1-34 13-45 (412)
494 1iow_A DD-ligase, DDLB, D-ALA\ 55.5 14 0.00048 29.3 4.6 32 2-34 1-41 (306)
495 2jl1_A Triphenylmethane reduct 55.1 8.3 0.00028 30.2 3.1 31 5-35 2-34 (287)
496 1gr0_A Inositol-3-phosphate sy 54.4 15 0.00052 31.5 4.8 35 3-37 15-71 (367)
497 3ond_A Adenosylhomocysteinase; 54.3 15 0.00052 32.7 4.9 31 4-36 266-296 (488)
498 1db3_A GDP-mannose 4,6-dehydra 54.1 16 0.00055 29.7 4.9 31 4-35 2-33 (372)
499 1qor_A Quinone oxidoreductase; 54.1 15 0.0005 29.9 4.6 30 4-34 142-172 (327)
500 3kd9_A Coenzyme A disulfide re 54.0 12 0.00043 31.8 4.3 35 1-35 1-36 (449)
No 1
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=100.00 E-value=1e-71 Score=479.28 Aligned_cols=183 Identities=57% Similarity=0.999 Sum_probs=178.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
+||||||||||||+++|++++++++++|+|||++.++++++|||||||+||+|+ ++++++++ .|.|||++|++++++|
T Consensus 2 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~e~d 79 (332)
T 3pym_A 2 VRVAINGFGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYA-GEVSHDDK-HIIVDGKKIATYQERD 79 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHSTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEECSS-EEEETTEEEEEECCSS
T ss_pred eEEEEECCCcHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhcccCCCCCCC-CcEEEcCC-EEEECCEEEEEEeecc
Confidence 799999999999999999999889999999999889999999999999999999 99999655 7999999999999999
Q ss_pred CCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCCCCeEEeecCccCCCCCCceEEcCChhhHhHHHHH
Q 029791 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCLAPLA 163 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d~p~~V~gvN~~~~~~~~~iis~~sCtT~~lap~l 163 (188)
|+++||++.|+|||+||||.|+++|+++.|+++||||||||+|++|+||||||||++.|+++++||||||||||||+|++
T Consensus 80 p~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~Lap~l 159 (332)
T 3pym_A 80 PANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSSTAPMFVMGVNEEKYTSDLKIVSNASCTTNCLAPLA 159 (332)
T ss_dssp GGGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHHHHH
T ss_pred cccCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEECCCCCCCCeEeeccchhhcCccccEEecCcchhhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred HHHHhhcCceEEEEEEEeeccCCCC
Q 029791 164 KVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 164 ~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
|+||++|||++++||||||+|++|+
T Consensus 160 kvL~d~fGI~~g~mTTvha~T~~Q~ 184 (332)
T 3pym_A 160 KVINDAFGIEEGLMTTVHSLTATQK 184 (332)
T ss_dssp HHHHHHHCEEEEEEEEEEECCTTSC
T ss_pred HHHHHhcCeEEEEEEEEeeccccch
Confidence 9999999999999999999999995
No 2
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=100.00 E-value=4.4e-72 Score=482.35 Aligned_cols=187 Identities=84% Similarity=1.345 Sum_probs=180.2
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCc-ceEEeCCCeeEECCEEEEEE
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHH-ELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~-~v~~~~~~~l~i~g~~i~v~ 79 (188)
|.++||||||||||||+++|++++++++++|+|||++.++++++|||||||+||+|+ + ++++++++.|.|||++|+++
T Consensus 1 m~~~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~-~~~v~~~~~~~l~i~Gk~I~v~ 79 (337)
T 3v1y_O 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWK-HSDIKIKDSKTLLLGEKPVTVF 79 (337)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTSCHHHHHHHHHCCTTTCCCC-SSCEEEEETTEEEETTEEEEEE
T ss_pred CCceEEEEECCChHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhhhccCCCccc-CceEEEcCCcEEEECCEEEEEE
Confidence 666899999999999999999999989999999999899999999999999999999 9 99997764699999999999
Q ss_pred eecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCCCCeEEeecCccCCCCCCceEEcCChhhHhH
Q 029791 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCL 159 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d~p~~V~gvN~~~~~~~~~iis~~sCtT~~l 159 (188)
+++||+++||++.|+|||+||||.|+++|+++.|+++||||||||+|++|+||||||||++.|+++++||||||||||||
T Consensus 80 ~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~L 159 (337)
T 3v1y_O 80 GIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCL 159 (337)
T ss_dssp CCSSGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred EecCcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeECCCCCHHHcCCCCcEEecCchhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999998889999999999999
Q ss_pred HHHHHHHHhhcCceEEEEEEEeeccCCCC
Q 029791 160 APLAKVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 160 ap~l~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
+|++|+||++|||++++||||||+|++|+
T Consensus 160 ap~lkvL~d~fGI~~g~mTTvha~T~~q~ 188 (337)
T 3v1y_O 160 APLAKVIHDNFGIIEGLMTTVHAITATQK 188 (337)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEECCCTTSB
T ss_pred HHHHHHHHHhcCeEEEEEeeeeeccchhh
Confidence 99999999999999999999999999995
No 3
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=100.00 E-value=9.8e-71 Score=473.77 Aligned_cols=183 Identities=47% Similarity=0.770 Sum_probs=176.7
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeec
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
++||||||||||||+++|++++++++++|+||| +.++++++|||||||+||+|+ ++++++++ .|.|||++|++++++
T Consensus 4 ~~kv~INGfGrIGr~v~R~~~~~~~~~ivaind-~~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~inGk~I~v~~e~ 80 (338)
T 3lvf_P 4 AVKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDG-GFRVNGKEVKSFSEP 80 (338)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEEC-SSCHHHHHHHHHCCTTTCCCS-SCEEEETT-EEEETTEEEEEECCS
T ss_pred cEEEEEECCCcHHHHHHHHHHHCCCceEEEEec-CCCHHHHHHHhccCCCCCCcC-CeEEEcCC-EEEECCEEEEEEEec
Confidence 489999999999999999999988999999999 579999999999999999999 99999765 699999999999999
Q ss_pred CCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCC-CCCeEEeecCccCCCCCCceEEcCChhhHhHHH
Q 029791 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNENEYKPELNIVSNASCTTNCLAP 161 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~-d~p~~V~gvN~~~~~~~~~iis~~sCtT~~lap 161 (188)
||+++||++.|+|||+||||.|+++|+++.|+++||||||||+|++ |+||||||||++.|++.++||||||||||||+|
T Consensus 81 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~IISNasCTTn~Lap 160 (338)
T 3lvf_P 81 DASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAP 160 (338)
T ss_dssp CGGGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCEECCTTTTGGGCCSCCSEEECCCHHHHHHHH
T ss_pred ccccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCCCCCCCEEeccCCHHHcCccCCeEecCchhhhhhHH
Confidence 9999999999999999999999999999999999999999999997 699999999999999888999999999999999
Q ss_pred HHHHHHhhcCceEEEEEEEeeccCCCC
Q 029791 162 LAKVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 162 ~l~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
++|+||++|||++++||||||+|++|+
T Consensus 161 ~lkvL~d~fGI~~g~mTTvha~T~~q~ 187 (338)
T 3lvf_P 161 VAKVLNDDFGLVEGLMTTIHAYTGDQN 187 (338)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSC
T ss_pred HHHHHHHhcCEEEEEEeeeccccchhh
Confidence 999999999999999999999999995
No 4
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=100.00 E-value=1.6e-70 Score=472.37 Aligned_cols=184 Identities=47% Similarity=0.804 Sum_probs=176.5
Q ss_pred CccEEEEEccChHHHHHHHHHHcC--CCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEE
Q 029791 2 GKVKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 2 ~~~kvgI~G~GriGr~~~r~~~~~--~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|++||||||||||||+++|+++++ +++++|+|||+ .++++++|||||||+||+|+ ++++++++ .|.|||++|+++
T Consensus 1 m~~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~-~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~ 77 (335)
T 3doc_A 1 MAVRVAINGFGRIGRNILRAIVESGRTDIQVVAINDL-GPVETNAHLLRYDSVHGRFP-KEVEVAGD-TIDVGYGPIKVH 77 (335)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCCEECSS-EEESSSSEEEEE
T ss_pred CCEEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCC-CCHHHHHHHhcccCCCCCCC-CeEEEecC-EEEECCEEEEEE
Confidence 248999999999999999999987 68999999999 69999999999999999999 99999654 799999999999
Q ss_pred eecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCC-CCeEEeecCccCCCCCCceEEcCChhhHh
Q 029791 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCTTNC 158 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d-~p~~V~gvN~~~~~~~~~iis~~sCtT~~ 158 (188)
+++||+++||++.|+|||+||||.|+++|+++.|+++||||||||+|++| +||||||||++.|+++++|||||||||||
T Consensus 78 ~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~~p~vV~gVN~~~~~~~~~IISNasCTTn~ 157 (335)
T 3doc_A 78 AVRNPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPADGADLTVVYGVNNDKLTKDHLVISNASCTTNC 157 (335)
T ss_dssp CCSSTTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCTTCSEECCTTTTGGGCCTTCCEEECCCHHHHH
T ss_pred eecccccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCCCCCCCEEecccCHHHhCccCCeEecCchhhhh
Confidence 99999999999999999999999999999999999999999999999987 79999999999999888999999999999
Q ss_pred HHHHHHHHHhhcCceEEEEEEEeeccCCCC
Q 029791 159 LAPLAKVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 159 lap~l~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
|+|++|+||++|||++++||||||+|++|+
T Consensus 158 Lap~lk~L~d~fGI~~g~mTTvha~T~~q~ 187 (335)
T 3doc_A 158 LAPVAQVLNDTIGIEKGFMTTIHSYTGDQP 187 (335)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCTTSC
T ss_pred hHHhHHHHHHHcCEEEEEEEeeeeccchhh
Confidence 999999999999999999999999999995
No 5
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=100.00 E-value=7.3e-70 Score=469.92 Aligned_cols=183 Identities=58% Similarity=1.054 Sum_probs=177.4
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeec
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
++||||||||||||+++|++++++ +++|+||||+.++++++|||||||+||+|+ ++++++++ .|.|||++|++++++
T Consensus 7 ~~kvgInGFGRIGrlv~R~~~~~~-veivainDp~~d~~~~a~l~~yDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~e~ 83 (346)
T 3h9e_O 7 ELTVGINGFGRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYK-GSVEFRNG-QLVVDNHEISVYQCK 83 (346)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEECCS
T ss_pred eeEEEEECCChHHHHHHHHHHhCC-CEEEEEeCCCCChhHhcccccccCCCCCCC-CcEEEcCC-EEEECCEEEEEEecC
Confidence 589999999999999999999886 999999999999999999999999999999 99999765 699999999999999
Q ss_pred CCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCCCCeEEeecCccCCCC-CCceEEcCChhhHhHHH
Q 029791 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKP-ELNIVSNASCTTNCLAP 161 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d~p~~V~gvN~~~~~~-~~~iis~~sCtT~~lap 161 (188)
||+++||++.|+|||+||||.|+++|+++.|+++||||||||+||+|+||||||||++.|++ +++||||||||||||+|
T Consensus 84 dp~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps~d~plvV~gVN~~~~~~~~~~IISNasCTTn~Lap 163 (346)
T 3h9e_O 84 EPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPDAPMFVMGVNENDYNPGSMNIVSNASCTTNCLAP 163 (346)
T ss_dssp SGGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTTCSEEECCCHHHHHHHH
T ss_pred ChhhCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeeCcccCHHHcCcccCCEEECCcchhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999997 78999999999999999
Q ss_pred HHHHHHhhcCceEEEEEEEeeccCCCC
Q 029791 162 LAKVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 162 ~l~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
++|+||++|||++++||||||+|++|+
T Consensus 164 ~lkvL~d~fGI~~g~mTTvhA~T~tQ~ 190 (346)
T 3h9e_O 164 LAKVIHERFGIVEGLMTTVHSYTATQK 190 (346)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSB
T ss_pred HHHHHHHHhCeeEEEEeeeeeccCccc
Confidence 999999999999999999999999995
No 6
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=100.00 E-value=2.5e-70 Score=474.11 Aligned_cols=186 Identities=48% Similarity=0.866 Sum_probs=177.0
Q ss_pred CccEEEEEccChHHHHHHHH----HHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEe-------CCCeeE
Q 029791 2 GKVKIGINGFGRIGRLVARV----ILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVK-------DDKTLL 70 (188)
Q Consensus 2 ~~~kvgI~G~GriGr~~~r~----~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~-------~~~~l~ 70 (188)
|++||||||||||||+++|+ +++++++++||||||+.++++++|||||||+||+|+ +++++. +++.|.
T Consensus 1 m~~kv~INGFGrIGr~v~Ra~~~~~~~~~~~~vvaINd~~~d~~~~a~llkyDS~hG~f~-~~v~~~~~~~~~~~~~~l~ 79 (359)
T 3ids_C 1 MPIKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFK-YEVTTTKSSPSVAKDDTLV 79 (359)
T ss_dssp CCEEEEEECTTHHHHHHHHHHHHTTCBTTTEEEEEEECSSCCHHHHHHHHHEETTTEECS-SCEEEECSCTTSSSCCEEE
T ss_pred CceEEEEECCChHHHHHHHHhHHHHhcCCCcEEEEEecCCCCHHHHHHHhcccCCCCCEe-eEEEecccccccCCCCEEE
Confidence 24899999999999999999 777788999999999899999999999999999999 999982 445799
Q ss_pred ECCEEEEEEe-ecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCC-CCCeEEeecCccCCCC-CCc
Q 029791 71 FGEKPVTVFG-VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNENEYKP-ELN 147 (188)
Q Consensus 71 i~g~~i~v~~-~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~-d~p~~V~gvN~~~~~~-~~~ 147 (188)
|||++|++++ +++|+++||++.|+|||+||||.|+++++++.|+++||||||||+|++ |+||||||||++.|++ .++
T Consensus 80 inGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~ 159 (359)
T 3ids_C 80 VNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASGGAKTLVMGVNHHEYNPSEHH 159 (359)
T ss_dssp ETTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCCBSSCEECCTTTTGGGCCTTTCS
T ss_pred ECCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCCeEEeccCHHHcCCCCCC
Confidence 9999999998 999999999999999999999999999999999999999999999998 6999999999999998 789
Q ss_pred eEEcCChhhHhHHHHHHHH-HhhcCceEEEEEEEeeccCCCC
Q 029791 148 IVSNASCTTNCLAPLAKVI-HDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 148 iis~~sCtT~~lap~l~~l-~~~~gI~~~~~ttiha~t~~q~ 188 (188)
||||||||||||+|++|+| |++|||++++||||||+|++|+
T Consensus 160 IISNaSCTTn~Lap~lkvL~~d~fGI~~g~mTTvha~T~tQ~ 201 (359)
T 3ids_C 160 VVSNASCTTNCLAPIVHVLVKEGFGVQTGLMTTIHSYTATQK 201 (359)
T ss_dssp EEECCCHHHHHHHHHHHHHHHTTCCCSEEEEEEEEECCTTSB
T ss_pred EEECCchHhhhHHHhhhhhhhccCCeEEEEEeeeeeccchhh
Confidence 9999999999999999999 9999999999999999999995
No 7
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=100.00 E-value=5.4e-70 Score=469.90 Aligned_cols=183 Identities=44% Similarity=0.799 Sum_probs=171.8
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeec
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
|+||||||||||||+++|++++++++++|+|||+ .++++++|||||||+||+|+ ++++++++ .|.|||++|++++++
T Consensus 4 ~~kv~INGfGrIGr~v~Ra~~~~~~~~ivaINd~-~d~~~~a~llkyDS~hG~f~-~~v~~~~~-~l~inGk~I~v~~e~ 80 (345)
T 4dib_A 4 MTRVAINGFGRIGRMVFRQAIKESAFEIVAINAS-YPSETLAHLIKYDTVHGKFD-GTVEAFED-HLLVDGKMIRLLNNR 80 (345)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTCSSSEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEECSS-EEEETTEEEEEECCS
T ss_pred cEEEEEECCCcHHHHHHHHHHhCCCceEEEEcCC-CCHHHHHHHhcccCCCCCCC-CcEEEcCC-EEEECCEEEEEeecC
Confidence 4899999999999999999999889999999999 59999999999999999999 99999655 799999999999999
Q ss_pred CCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCC-CCCeEEeecCccCCCC-CCceEEcCChhhHhHH
Q 029791 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNENEYKP-ELNIVSNASCTTNCLA 160 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~-d~p~~V~gvN~~~~~~-~~~iis~~sCtT~~la 160 (188)
||+++||++.|+|||+||||.|+++|+++.|+++||||||||+|++ |+||||||||++.|++ .++||||||||||||+
T Consensus 81 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~IISNaSCTTn~La 160 (345)
T 4dib_A 81 DPKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPGKNEDVTIVVGVNEDQLDITKHTVISNASCTTNCLA 160 (345)
T ss_dssp CGGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCSEEECCCHHHHHHH
T ss_pred ChhhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHcCcccCeEEECCchhhhhhH
Confidence 9999999999999999999999999999999999999999999998 4899999999999997 6899999999999999
Q ss_pred HHHHHHHhhcCceEEEEEEEeeccCCCC
Q 029791 161 PLAKVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 161 p~l~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
|++|+||++|||++++||||||+|++|+
T Consensus 161 p~lkvL~d~fGI~~g~mTTvhA~T~~Q~ 188 (345)
T 4dib_A 161 PVVKVLDEQFGIENGLMTTVHAYTNDQK 188 (345)
T ss_dssp HHHHHHHHHHCEEEEEEEEEECC-----
T ss_pred HHHHHHHHhcCeEEEEEEeeeeccCCce
Confidence 9999999999999999999999999995
No 8
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=100.00 E-value=5.9e-67 Score=452.58 Aligned_cols=182 Identities=44% Similarity=0.814 Sum_probs=174.7
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeec
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
++||||||||||||.++|+++++ ++++|+|||+ .++++++|||||||+||+|+ ++++.+++ .|.|||++|++++++
T Consensus 21 ~~kVaInGfGrIGr~vlr~l~e~-~~~ivaIndl-~d~~~~a~llkydS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~~~ 96 (356)
T 3hja_A 21 SMKLAINGFGRIGRNVFKIAFER-GIDIVAINDL-TDPKTLAHLLKYDSTFGVYN-KKVESRDG-AIVVDGREIKIIAER 96 (356)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-TCEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEETT-EEEETTEEEEEECCS
T ss_pred CeEEEEECCCHHHHHHHHHHHHC-CCCEEEEeCC-CCHHHhhhhhccccCCCCCC-CCEEEcCC-EEEECCEEEEEEEcC
Confidence 58999999999999999999998 7999999999 59999999999999999999 99998665 799999999999999
Q ss_pred CCCCCCcccCCccEEEeecCcccC----HHhHHHHHh-CCCcEEEEeCCCCC-CCeEEeecCccCCCCCCceEEcCChhh
Q 029791 83 NPEEIPWAETGAEYVVESTGVFTD----KDKAAAHLK-GGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCTT 156 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~----~~~~~~h~~-~Gakkviis~ps~d-~p~~V~gvN~~~~~~~~~iis~~sCtT 156 (188)
||+++||++.|+|||+||||.|++ +++++.|++ +||||||||+|++| +||||||||++.|++.++|||||||||
T Consensus 97 dp~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps~d~vp~vV~gVN~~~~~~~~~IISNaSCTT 176 (356)
T 3hja_A 97 DPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCTT 176 (356)
T ss_dssp SGGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCCSSCCEECCTTTSGGGCCTTCCEEECCCHHH
T ss_pred ChhhCCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCCCCCCCEEeccCCHHHcCcCccEEECCccch
Confidence 999999999999999999999999 999999999 99999999999987 799999999999998789999999999
Q ss_pred HhHHHHHHHHHhhcCceEEEEEEEeeccCCCC
Q 029791 157 NCLAPLAKVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 157 ~~lap~l~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
|||+|++|+||++|||++++||||||+|++|+
T Consensus 177 n~Lap~lkvL~d~fGI~~g~mTTvhA~T~~Q~ 208 (356)
T 3hja_A 177 NCLAPLAKVLHESFGIEQGLMTTVHAYTNDQR 208 (356)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEEECCTTSB
T ss_pred hhhhHhHHHHHHhcCeEEEEEEEEEecccccc
Confidence 99999999999999999999999999999995
No 9
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=100.00 E-value=2e-66 Score=449.26 Aligned_cols=186 Identities=59% Similarity=0.977 Sum_probs=177.1
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEe
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
|.++||||||||||||+++|++++++++|+|+||||+.++++++|||||||+||+|+ ++++++++ .|.+||++|++++
T Consensus 9 ~~~~kv~INGfGrIGr~v~ra~~~~~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~-~~v~~~~~-~l~v~Gk~i~v~~ 86 (345)
T 2b4r_O 9 MAATKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFP-CEVTHADG-FLLIGEKKVSVFA 86 (345)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEESSCEEEEEC
T ss_pred hhheEEEEeCCchHHHHHHHHHhhCCCcEEEEEcCCCCChHHHHHHhccCCCCCcCC-CCEEEcCC-EEEECCEEEEEEE
Confidence 556899999999999999999999999999999998889999999999999999999 99999755 6999999999999
Q ss_pred ecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCC-CCeEEeecCccCCCCCCceEEcCChhhHhH
Q 029791 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCTTNCL 159 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d-~p~~V~gvN~~~~~~~~~iis~~sCtT~~l 159 (188)
++||++++|++.++||||||||.|+++++++.|+++||||||||+|+++ +||||||||++.|++.++||||||||||||
T Consensus 87 ~~dp~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps~~dvplvV~gVN~~~~~~~~~IISNasCTTn~L 166 (345)
T 2b4r_O 87 EKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCL 166 (345)
T ss_dssp CSSGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred cCCcccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHhCCCCCEEECCchHHHHH
Confidence 9999999999999999999999999999999999999999999999986 799999999999987678999999999999
Q ss_pred HHHHHHHHhhcCceEEEEEEEeeccCCCC
Q 029791 160 APLAKVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 160 ap~l~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
+|++|+||++|||++++||||||+|++|+
T Consensus 167 ap~lk~L~d~fGI~~~~mTTvhA~T~~q~ 195 (345)
T 2b4r_O 167 APLAKVINDRFGIVEGLMTTVHASTANQL 195 (345)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEECCCTTSC
T ss_pred HHHHHHHHHhcCeeEEEEEEeehhhchhh
Confidence 99999999999999999999999999995
No 10
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=100.00 E-value=5.3e-65 Score=439.31 Aligned_cols=182 Identities=44% Similarity=0.732 Sum_probs=174.8
Q ss_pred cEEEEEccChHHHHHHHHHHcC---CCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQR---DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~---~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
+||||||||||||+++|+++++ +++|+|+|||+ .++++++|||+|||+||+|+ +++++++ +.|.++|++|++++
T Consensus 2 ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~-~~~~~~a~ll~ydS~hg~f~-~~v~~~~-~~l~v~g~~i~v~~ 78 (335)
T 1obf_O 2 IRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDL-GDPKTNAHLTRYDTAHGKFP-GTVSVNG-SYMVVNGDKIRVDA 78 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEET-TEEEETTEEEEEEC
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCC-CCHHHHHHHhccCCcCCCCC-CCEEEeC-CEEEECCEEEEEEE
Confidence 6999999999999999999988 79999999997 69999999999999999999 9999975 47999999999999
Q ss_pred ecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCC-CCC-eEEeecCccCCCCCCceEEcCChhhHh
Q 029791 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAP-MFVVGVNENEYKPELNIVSNASCTTNC 158 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~-d~p-~~V~gvN~~~~~~~~~iis~~sCtT~~ 158 (188)
++||++++|++.|+||||||||.|+++++++.|+++||||||||+|++ |+| |||||||++.|++.++|||||||||||
T Consensus 79 ~~dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps~~dvp~~vV~gVN~~~~~~~~~IISNasCTTn~ 158 (335)
T 1obf_O 79 NRNPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGGADVDATVVYGVNHGTLKSTDTVISNASCTTNC 158 (335)
T ss_dssp CSCGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHHH
T ss_pred cCCcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEECCcccCCCCceEEccCCHHHhCcCccEEeCCcHHHHH
Confidence 999999999999999999999999999999999999999999999997 789 999999999998767899999999999
Q ss_pred HHHHHHHHHhhcCceEEEEEEEeeccCCCC
Q 029791 159 LAPLAKVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 159 lap~l~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
|+|++|+||++|||++++||||||+|++|+
T Consensus 159 Lap~lk~L~d~fGI~~~~mTTvha~T~~q~ 188 (335)
T 1obf_O 159 LAPLVKPLNDKLGLQDGLMTTVHAYTNNQV 188 (335)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCTTSC
T ss_pred HHHHHHHHHHhcCeeEEEEEEEchhhhhhh
Confidence 999999999999999999999999999995
No 11
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=100.00 E-value=3.4e-65 Score=441.30 Aligned_cols=183 Identities=49% Similarity=0.883 Sum_probs=175.2
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeec
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
++||||||||||||+++|++++++++++|+|||. .++++++|||+|||+||+|+ +++++++ +.|.+||++|++++++
T Consensus 2 ~ikV~InGfGrIGr~v~r~l~~~~~~evvaInd~-~~~~~~a~ll~yDs~hG~~~-~~v~~~~-~~l~v~Gk~i~v~~~~ 78 (342)
T 2ep7_A 2 AIKVGINGFGRIGRSFFRASWGREEIEIVAINDL-TDAKHLAHLLKYDSVHGIFK-GSVEAKD-DSIVVDGKEIKVFAQK 78 (342)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTCTTCEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEECS-SEEEETTEEEEEECCS
T ss_pred ceEEEEECCCHHHHHHHHHHHhCCCceEEEEecC-CChHHHhhhhhcccccccCC-CcEEEcC-CEEEECCEEEEEEEcC
Confidence 3799999999999999999999989999999995 69999999999999999999 9999865 4799999999999999
Q ss_pred CCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCCCC-eEEeecCccCCCC-CCceEEcCChhhHhHH
Q 029791 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAP-MFVVGVNENEYKP-ELNIVSNASCTTNCLA 160 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d~p-~~V~gvN~~~~~~-~~~iis~~sCtT~~la 160 (188)
+|++++|++.++||||||||.|+++++++.|+++||||||||+|++|+| |||||||++.|++ .++||||||||||||+
T Consensus 79 dp~~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps~dvp~~vV~gVN~~~~~~~~~~IISNasCTTn~La 158 (342)
T 2ep7_A 79 DPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAKNPDITVVLGVNEEKYNPKEHNIISNASCTTNCLA 158 (342)
T ss_dssp SGGGCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHH
T ss_pred ChhhCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCCCCCceEEcCcCHHHhcccCCeEEECCChHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 9999999999997 5789999999999999
Q ss_pred HHHHHHHhhcCceEEEEEEEeeccCCCC
Q 029791 161 PLAKVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 161 p~l~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
|++|+||++|||++++||||||+|++|+
T Consensus 159 p~lk~L~d~fGI~~~~mTTvha~T~~q~ 186 (342)
T 2ep7_A 159 PCVKVLNEAFGVEKGYMVTVHAYTNDQR 186 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSB
T ss_pred HHHHHHHHHcCeeEEEEEEEeecccchh
Confidence 9999999999999999999999999995
No 12
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=100.00 E-value=7.4e-59 Score=401.29 Aligned_cols=181 Identities=50% Similarity=0.811 Sum_probs=172.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
+||||||||||||.++|+++++ ++++++|||+ .++++++|||+|||+||+|. ++++.+++ .|.++|+.|++++++|
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~-~~evvaind~-~~~~~~a~ll~~ds~~G~~~-~~v~~~~~-~l~v~g~~i~v~~~~d 76 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSR-GVEVALINDL-TDNKTLAHLLKYDSIYHRFP-GEVAYDDQ-YLYVDGKAIRATAVKD 76 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECS-SCHHHHHHHHHCCTTTCSCS-SCEEECSS-EEEETTEEEEEECCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCEEEEEecC-CCHHHHhHhhhccccCCCCC-ceEEEcCC-EEEECCEEEEEEecCC
Confidence 4899999999999999999988 8999999996 69999999999999999999 99998654 6999999999998899
Q ss_pred CCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCC-CCeEEeecCccCCCC-CCceEEcCChhhHhHHH
Q 029791 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKP-ELNIVSNASCTTNCLAP 161 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d-~p~~V~gvN~~~~~~-~~~iis~~sCtT~~lap 161 (188)
|++++|++.++|+||||||.|.+++.++.|+++||||||||+|++| +|+||||||++.|++ .++||||||||||||+|
T Consensus 77 p~~l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~d~~p~vV~gVN~~~~~~~~~~IIsnasCtTn~lap 156 (331)
T 2g82_O 77 PKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYDPSRHHIISNASCTTNSLAP 156 (331)
T ss_dssp GGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCCEEECCCHHHHHHHH
T ss_pred hhhCcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCcCCCCEEeeccCHHHhCcCCCCEEECCChHHHHHHH
Confidence 9999999999999999999999999999999999999999999987 799999999999986 47899999999999999
Q ss_pred HHHHHHhhcCceEEEEEEEeeccCCCC
Q 029791 162 LAKVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 162 ~l~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
++|+||++|||+++.|||+||+|++|+
T Consensus 157 ~lk~L~~~fgI~~~~mtTvha~Tg~q~ 183 (331)
T 2g82_O 157 VMKVLEEAFGVEKALMTTVHSYTNDQR 183 (331)
T ss_dssp HHHHHHHHTCEEEEEEEEEEECCTTSB
T ss_pred HHHHHHHhcCccEEEEEEEeecccccc
Confidence 999999999999999999999999985
No 13
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=100.00 E-value=1.6e-58 Score=404.79 Aligned_cols=184 Identities=43% Similarity=0.773 Sum_probs=174.2
Q ss_pred CccEEEEEccChHHHHHHHHHHcC--CCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEE
Q 029791 2 GKVKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 2 ~~~kvgI~G~GriGr~~~r~~~~~--~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|++||||||||||||.++|+++++ |++++|+|||+ .++++++|||+|||+||+|. ++++++++ .|.++|+.|.++
T Consensus 1 M~ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~-~d~~~~a~ll~yds~~G~~~-~~v~~~~~-~l~v~g~~i~v~ 77 (380)
T 2d2i_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT-SDARTAAHLLEYDSVLGRFN-ADISYDEN-SITVNGKTMKIV 77 (380)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECS-SCHHHHHHHHHCCTTTCCCC-SCEEEETT-EEEETTEEEEEE
T ss_pred CCcEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecC-CCHHHHHHhhcccccCCCCC-CcEEEeCC-eEEECCeEEEEE
Confidence 138999999999999999999988 89999999997 59999999999999999999 99998655 699999999999
Q ss_pred eecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCC-CC-eEEeecCccCCCC-CCceEEcCChhh
Q 029791 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-AP-MFVVGVNENEYKP-ELNIVSNASCTT 156 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d-~p-~~V~gvN~~~~~~-~~~iis~~sCtT 156 (188)
+++||++++|++.++|+||||||.|.+++.++.|+++||||||||+|++| +| +||||||++.|++ .++|||||||||
T Consensus 78 ~~~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps~d~~p~~~V~GVN~e~~~~~~~~IVSNasCtT 157 (380)
T 2d2i_A 78 CDRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKAEGVGTYVIGVNDSEYRHEDFAVISNASCTT 157 (380)
T ss_dssp CCSCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHH
T ss_pred ecCChHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEEcCCCCCCCCceEEcccCHHHhcccCCcEEECCchHH
Confidence 99999999998889999999999999999999999999999999999987 78 9999999999997 478999999999
Q ss_pred HhHHHHHHHHHhhcCceEEEEEEEeeccCCCC
Q 029791 157 NCLAPLAKVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 157 ~~lap~l~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
|||+|++|+||++|||++++|||+||+|++|+
T Consensus 158 n~lap~lk~L~d~fgI~~g~mTTvha~Tg~q~ 189 (380)
T 2d2i_A 158 NCLAPVAKVLHDNFGIIKGTMTTTHSYTLDQR 189 (380)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEEECCTTSC
T ss_pred HHHHHHHHHHHHhcCeeEEEEEEEeeccccch
Confidence 99999999999999999999999999999985
No 14
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=100.00 E-value=2.6e-57 Score=392.88 Aligned_cols=184 Identities=43% Similarity=0.773 Sum_probs=174.1
Q ss_pred CccEEEEEccChHHHHHHHHHHcC--CCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEE
Q 029791 2 GKVKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 2 ~~~kvgI~G~GriGr~~~r~~~~~--~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|++||||||||||||.++|++.++ |++++|+|||+ .++++++|||+|||+||+|. ++++++++ .|.++|+.+.++
T Consensus 1 M~ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~-~~~~~~~~l~~~ds~~G~~~-~~v~~~~~-~l~v~g~~i~v~ 77 (339)
T 3b1j_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT-SDARTAAHLLEYDSVLGRFN-ADISYDEN-SITVNGKTMKIV 77 (339)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECS-SCHHHHHHHHHCCTTTCCCC-SCEEEETT-EEEETTEEEEEE
T ss_pred CceEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecC-CCHHHHHHHhccccccCCCC-CcEEEcCC-eeeecCceEEEE
Confidence 138999999999999999999988 89999999997 59999999999999999999 99998655 699999999999
Q ss_pred eecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCC-CC-eEEeecCccCCCC-CCceEEcCChhh
Q 029791 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-AP-MFVVGVNENEYKP-ELNIVSNASCTT 156 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d-~p-~~V~gvN~~~~~~-~~~iis~~sCtT 156 (188)
+++||++++|++.++|+||||||.|.+++.++.|+++|+||||||+|++| .| +||||||++.|++ .++|||||||||
T Consensus 78 ~~~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~~~~~p~~~V~gVN~~~~~~~~~~IISnasCtT 157 (339)
T 3b1j_A 78 CDRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKGEGVGTYVIGVNDSEYRHEDFAVISNASCTT 157 (339)
T ss_dssp CCSCGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHH
T ss_pred ecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCCCCCCCeeEEcccCHHHhCcCCCeEEECCcchh
Confidence 99999999999889999999999999999999999999999999999887 78 9999999999987 478999999999
Q ss_pred HhHHHHHHHHHhhcCceEEEEEEEeeccCCCC
Q 029791 157 NCLAPLAKVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 157 ~~lap~l~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
|||+|++|+||++|||++++|||+|++|++|+
T Consensus 158 n~lap~lk~L~~~fgI~~~~~tTvha~Tg~q~ 189 (339)
T 3b1j_A 158 NCLAPVAKVLHDNFGIIKGTMTTTHSYTLDQR 189 (339)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEEEEECCTTSC
T ss_pred hHHHHHHHHHHHhCCeeEEEEEEEEeecCCch
Confidence 99999999999999999999999999999985
No 15
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=100.00 E-value=1.2e-57 Score=396.63 Aligned_cols=185 Identities=61% Similarity=1.032 Sum_probs=174.0
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEee
Q 029791 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 2 ~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
+++||||||||||||.++|+++++|++|+|+||||..++++++|||+|||+||+|. +.++++++ .|.+||+.+.++++
T Consensus 16 ~~ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~-~~v~~~~~-~l~v~g~~i~v~~~ 93 (354)
T 3cps_A 16 FQGTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFN-GTVEVSGK-DLCINGKVVKVFQA 93 (354)
T ss_dssp --CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCS-SCEEECC--CEEETTEEEEEECC
T ss_pred cceEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCC-CcEEEeCC-EEEECCeEEEEEec
Confidence 35899999999999999999999999999999997779999999999999999999 99988655 69999999999999
Q ss_pred cCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCC-CCeEEeecCccCCCCC-CceEEcCChhhHhH
Q 029791 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPE-LNIVSNASCTTNCL 159 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d-~p~~V~gvN~~~~~~~-~~iis~~sCtT~~l 159 (188)
+||++++|++.++|+||||||.|.+++.++.|+++|+||||||+|++| +|++|||||++.|++. .+||||||||||||
T Consensus 94 ~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~padd~~p~~V~GVN~~~~~~~~~~IISNpsCtTn~l 173 (354)
T 3cps_A 94 KDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNCL 173 (354)
T ss_dssp SCGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCSSCCCBCCTTTTGGGCCTTTCSEEECCCHHHHHH
T ss_pred CChHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCCCCCCCCEEEeccCHHHhCcCCCcEEECCCcHHHHH
Confidence 999999998889999999999999999999999999999999999886 7999999999999864 78999999999999
Q ss_pred HHHHHHHHhhcCceEEEEEEEeeccCCCC
Q 029791 160 APLAKVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 160 ap~l~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
+|+++||+++|||+++.|||+||+|++|+
T Consensus 174 ap~lkpL~~~~gI~~g~mtTvha~Tg~q~ 202 (354)
T 3cps_A 174 APLAKIINDKFGIVEGLMTTVHSLTANQL 202 (354)
T ss_dssp HHHHHHHHHHTCEEEEEEEEEEECCTTSC
T ss_pred HHHHHHHHHhCCeeEEEEEEEecccccch
Confidence 99999999999999999999999999985
No 16
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=100.00 E-value=1.7e-57 Score=393.53 Aligned_cols=183 Identities=46% Similarity=0.794 Sum_probs=173.2
Q ss_pred cEEEEEccChHHHHHHHHHHcC--CCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEee
Q 029791 4 VKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~--~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
+||||||||||||.++|+++++ |++|+++|||. .++++++|||+|||+||+|. +++.+.+++.|.++|+.+.++++
T Consensus 2 ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~-~~~~~~a~ll~sds~~G~~~-~~v~~~~~~~l~v~g~~i~v~~~ 79 (337)
T 1rm4_O 2 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDT-GGVKQASHLLKYDSILGTFD-ADVKTAGDSAISVDGKVIKVVSD 79 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECT-TCHHHHHHHHHCCTTTCSCS-SCEEECTTSEEEETTEEEEEECC
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcC-CCHHHHHHHhcccccCCCcc-ceeEEecCCeEEECCeEEEEEec
Confidence 7999999999999999999988 89999999995 69999999999999999999 89883344569999999999999
Q ss_pred cCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCC-CCeEEeecCccCCCCCCceEEcCChhhHhHH
Q 029791 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCTTNCLA 160 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d-~p~~V~gvN~~~~~~~~~iis~~sCtT~~la 160 (188)
+||++++|++.++|+||||||.|.+++.++.|+++|||+|++|+|+.| +|+||||||++.|++.++||||||||||||+
T Consensus 80 ~dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~r~d~p~~V~GVN~~~~~~~~~IIsNasCtTn~la 159 (337)
T 1rm4_O 80 RNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLA 159 (337)
T ss_dssp SCGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCCBCCTTTTGGGCCTTCSEEECCCHHHHHHH
T ss_pred CChhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEECCcccCCCCeEeecCCHHHhCCCCeEEECCChHHHHHH
Confidence 999999999889999999999999999999999999999999999876 7999999999999866789999999999999
Q ss_pred HHHHHHHhhcCceEEEEEEEeeccCCCC
Q 029791 161 PLAKVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 161 p~l~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
|++|+||++|||+++.|||+||+|++|+
T Consensus 160 p~lk~L~~~fgI~~~~mtTvha~Tgaq~ 187 (337)
T 1rm4_O 160 PFVKVLDQKFGIIKGTMTTTHSYTGDQR 187 (337)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSC
T ss_pred HHHHHHHHhcCeeEEEEEEEEecCCccc
Confidence 9999999999999999999999999985
No 17
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=100.00 E-value=1.5e-56 Score=388.01 Aligned_cols=187 Identities=83% Similarity=1.332 Sum_probs=173.0
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEE-eCCCeeEECCEEEEEE
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKV-KDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~-~~~~~l~i~g~~i~v~ 79 (188)
||++||||||||||||.++|++.++|++|+++|||++.++++++|||+|||+||+|.++.++. ++ +.|.++|+.+.++
T Consensus 1 mm~ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~-~~l~~~g~~i~v~ 79 (337)
T 3e5r_O 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDS-KTLLLGEKPVTVF 79 (337)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSS-SEEEETTEEEEEE
T ss_pred CCceEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecC-CeeEECCeEEEEE
Confidence 666899999999999999999999999999999997668999999999999999985134554 44 4699999999999
Q ss_pred eecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCCCCeEEeecCccCCCCCCceEEcCChhhHhH
Q 029791 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCL 159 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d~p~~V~gvN~~~~~~~~~iis~~sCtT~~l 159 (188)
+++||++++|++.++|+||||||.|.+++.++.|+++|+||||||+|++|.|++|||||++.|++.++||||||||||||
T Consensus 80 ~~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa~d~p~~V~gvN~~~~~~~~~iIsnpsCtt~~l 159 (337)
T 3e5r_O 80 GIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCL 159 (337)
T ss_dssp CCSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred ecCChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCCCCCCEEEeccCHHHhCCCCcEEECCChHHHHH
Confidence 99999999998889999999999999999999999999999999999988999999999999986678999999999999
Q ss_pred HHHHHHHHhhcCceEEEEEEEeeccCCCC
Q 029791 160 APLAKVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 160 ap~l~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
+|+++|||++|||+++.|||+||+|++|+
T Consensus 160 a~~lkpL~~~~gI~~~~~ttvha~Tg~q~ 188 (337)
T 3e5r_O 160 APLAKVIHDNFGIIEGLMTTVHAITATQK 188 (337)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEECCTTSB
T ss_pred HHHHHHHHHhcCccccceeEEEeeccccc
Confidence 99999999999999999999999999984
No 18
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=100.00 E-value=1.4e-56 Score=387.68 Aligned_cols=182 Identities=53% Similarity=0.880 Sum_probs=173.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
+||||||||||||.++|+++++|++++++|||. .++++++|||+|||+||+|. ++++++++ .|.++|+.+.+++++|
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~~~veivain~~-~~~~~~~~ll~~ds~~G~~~-~~v~~~~~-~l~v~g~~i~v~~~~d 78 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKNPDIEVVAVNDL-TDANTLAHLLKYDSVHGRLD-AEVSVNGN-NLVVNGKEIIVKAERD 78 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCTTEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEETT-EEEETTEEEEEECCSS
T ss_pred eEEEEECCCHHHHHHHHHHhCCCCeEEEEEeCC-CCHHHHHHHhccCCcCCCcC-ceEEEccC-cEEECCEEEEEEecCC
Confidence 799999999999999999999999999999996 59999999999999999999 89998655 6999999999998899
Q ss_pred CCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCC-CCeEEeecCccCCCC-CCceEEcCChhhHhHHH
Q 029791 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKP-ELNIVSNASCTTNCLAP 161 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d-~p~~V~gvN~~~~~~-~~~iis~~sCtT~~lap 161 (188)
|++++|++.++|+||||||.|.+++.++.|+++||||||||+|++| .|++|||||++.|++ .++||||||||||||+|
T Consensus 79 p~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~pa~d~~p~~V~eVN~~~i~~~~~~IIsNpsCttn~lap 158 (334)
T 3cmc_O 79 PENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAP 158 (334)
T ss_dssp GGGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHHH
T ss_pred hhhcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCCCccCCCEeccccCHHHhCccCCeEEECCChHHHHHHH
Confidence 9999999999999999999999999999999999999999999887 799999999999986 37899999999999999
Q ss_pred HHHHHHhhcCceEEEEEEEeeccCCCC
Q 029791 162 LAKVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 162 ~l~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
+++|||++|||+++.|||+||+|++|+
T Consensus 159 ~lkpL~~~~gI~~~~mtTvha~Sg~q~ 185 (334)
T 3cmc_O 159 FAKVLHEQFGIVRGMMTTVHSYTNDQR 185 (334)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSB
T ss_pred HHHHHHHhcCceeeeEEEEEeccchhh
Confidence 999999999999999999999999985
No 19
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=100.00 E-value=2.8e-56 Score=385.98 Aligned_cols=186 Identities=63% Similarity=1.095 Sum_probs=175.0
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEe
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
||++||||||||||||.++|++.++|++++++|||++.++++++||++|||+||+|. +.++++++ .|.++|+.+++++
T Consensus 1 mM~ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~-~~~~~~~~-~l~v~g~~i~v~~ 78 (335)
T 1u8f_O 1 MGKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFH-GTVKAENG-KLVINGNPITIFQ 78 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEEC
T ss_pred CCceEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCC-CceEEcCC-eEEECCeEEEEEe
Confidence 667899999999999999999998899999999997568999999999999999999 89888655 6999999999999
Q ss_pred ecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCCCCeEEeecCccCCCCCCceEEcCChhhHhHH
Q 029791 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCLA 160 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d~p~~V~gvN~~~~~~~~~iis~~sCtT~~la 160 (188)
++||++++|++.++|+||||||.|.+++.++.|+++|+|+|++|+|++|.|++|||||++.|++.++||||||||||||+
T Consensus 79 ~~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap~~~~p~~V~gvN~~~~~~~~~iIsnpsCtt~~l~ 158 (335)
T 1u8f_O 79 ERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLA 158 (335)
T ss_dssp CSSGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCSSSCBCCTTTTGGGCCTTCSEEECCCHHHHHHH
T ss_pred cCCHHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccCCCCCCeEEeccCHHHhCCCCCEEECCChHHHHHH
Confidence 99999999998899999999999999999999999999999999998889999999999999865789999999999999
Q ss_pred HHHHHHHhhcCceEEEEEEEeeccCCCC
Q 029791 161 PLAKVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 161 p~l~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
|+++||+++|||+++.|||+|++|++|+
T Consensus 159 ~~lkpL~~~~gI~~~~~tt~~a~Tg~q~ 186 (335)
T 1u8f_O 159 PLAKVIHDNFGIVEGLMTTVHAITATQK 186 (335)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSB
T ss_pred HHHHHHHHhCCcceeEEEEEeccccCcc
Confidence 9999999999999999999999999985
No 20
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=7.1e-56 Score=382.99 Aligned_cols=182 Identities=48% Similarity=0.867 Sum_probs=173.1
Q ss_pred cEEEEEccChHHHHHHHHHHcC--CCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEee
Q 029791 4 VKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~--~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
+||||||||||||.++|+++++ |++|+++|||. .++++++|||+|||+||+|. ++++++++ .|.++|+.+.++++
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~-~~~~~~~~ll~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~v~~~ 77 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDL-TDTKTLAHLLKYDSVHKKFP-GKVEYTEN-SLIVDGKEIKVFAE 77 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECS-SCHHHHHHHHHCCTTTCCCS-SCEEECSS-EEEETTEEEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcC-CChHHhhhhccCcCcCCCcC-CcEEEcCC-EEEECCeEEEEEec
Confidence 5899999999999999999988 89999999996 59999999999999999999 99998654 69999999999988
Q ss_pred cCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCCCC-eEEeecCccCCCCCCceEEcCChhhHhHH
Q 029791 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAP-MFVVGVNENEYKPELNIVSNASCTTNCLA 160 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d~p-~~V~gvN~~~~~~~~~iis~~sCtT~~la 160 (188)
+||++++|++.++|+||||||.|.+++.++.|+++|+||||||+|++|.| ++|||||++.|++.++||||||||||||+
T Consensus 78 ~dp~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVId~~a~d~p~~~V~eVN~~~i~~~~~iIsNpsCttn~la 157 (332)
T 1hdg_O 78 PDPSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAKGEDITVVIGCNEDQLKPEHTIISCASCTTNSIA 157 (332)
T ss_dssp SSGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTCCEEECCCHHHHHHH
T ss_pred CChHHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEEeCCCCCCCceEEeccCHHHhCCCCcEEECCccHHHHHH
Confidence 99999999988999999999999999999999999999999999998899 99999999999865789999999999999
Q ss_pred HHHHHHHhhcCceEEEEEEEeeccCCCC
Q 029791 161 PLAKVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 161 p~l~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
|+++||+++|||+++.|||+||+|++|+
T Consensus 158 p~lkpL~~~~gI~~~~~ttvha~Sg~q~ 185 (332)
T 1hdg_O 158 PIVKVLHEKFGIVSGMLTTVHSYTNDQR 185 (332)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSB
T ss_pred HHHHHHHHhcCeeEeEEEEEEeccchhh
Confidence 9999999999999999999999999985
No 21
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=100.00 E-value=1.6e-55 Score=380.61 Aligned_cols=181 Identities=54% Similarity=0.938 Sum_probs=172.3
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
+||||||||||||.++|+++++|++|+++|||. .++++++|||+|||+||+|. +.++++++ .|.+||+.|++++++|
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~-~~~~~~a~l~~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~v~~~~d 78 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKRSDIEIVAINDL-LDADYMAYMLKYDSTHGRFD-GTVEVKDG-HLIVNGKKIRVTAERD 78 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECS-SCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEECCSS
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCC-CChhHHhHhhcccccCCCCC-CeEEEcCC-EEEECCEEEEEEEcCC
Confidence 799999999999999999999999999999996 58999999999999999999 89988655 6999999999999999
Q ss_pred CCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCC-CCeEEeecCccCCCCCCceEEcCChhhHhHHHH
Q 029791 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCTTNCLAPL 162 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d-~p~~V~gvN~~~~~~~~~iis~~sCtT~~lap~ 162 (188)
|++++|++.++|+||||||.|.+++.++.|+++|+|+|++|+|+++ .|++|||||++.|+ .++||||||||||||+|+
T Consensus 79 p~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~~~~~p~~V~GvN~~~~~-~~~iIsNpsCtt~~lap~ 157 (330)
T 1gad_O 79 PANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYA-GQDIVSNASCTTNCLAPL 157 (330)
T ss_dssp GGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCC-SCSEEECCCHHHHHHHHH
T ss_pred hhhCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEECCCCCCCCCeEeecCCHHHhC-CCCEEEcCChHHHHHHHH
Confidence 9999998889999999999999999999999999999999999864 79999999999998 678999999999999999
Q ss_pred HHHHHhhcCceEEEEEEEeeccCCCC
Q 029791 163 AKVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 163 l~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
++|||++|||+++.|||+||+|++|+
T Consensus 158 lkpL~~~~gI~~~~~ttvha~Tg~q~ 183 (330)
T 1gad_O 158 AKVINDNFGIIEGLMTTVHATTATQK 183 (330)
T ss_dssp HHHHHHHHCEEEEEEEEEECCCTTSB
T ss_pred HHHHHHhcCeeEEEEEEEEecccccc
Confidence 99999999999999999999999984
No 22
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=100.00 E-value=2.7e-55 Score=380.29 Aligned_cols=184 Identities=39% Similarity=0.734 Sum_probs=169.8
Q ss_pred CccEEEEEccChHHHHHHHHHHc---CCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEE
Q 029791 2 GKVKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 2 ~~~kvgI~G~GriGr~~~r~~~~---~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
|++||||||||||||.++|++.+ +|++++++|||. .++++++|||+|||+||+|. ++++++++ .|.++|+.+++
T Consensus 1 M~ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~~-~~~~~~~~ll~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~v 77 (339)
T 2x5j_O 1 MTVRVAINGFGRIGRNVVRALYESGRRAEITVVAINEL-ADAAGMAHLLKYDTSHGRFA-WEVRQERD-QLFVGDDAIRV 77 (339)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEECS-SCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEE
T ss_pred CCeEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeCC-CCHHHHHHHhcccccCCCCC-ceEEEcCC-eeEECCEEEEE
Confidence 14899999999999999999998 889999999997 59999999999999999999 89988654 69999999999
Q ss_pred EeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCC-CCCC-eEEeecCccCCCCCCceEEcCChhh
Q 029791 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-KDAP-MFVVGVNENEYKPELNIVSNASCTT 156 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps-~d~p-~~V~gvN~~~~~~~~~iis~~sCtT 156 (188)
++++||++++|++.++|+||||||.|.+++.++.|+++|+||||||+|+ .|.| ++|||||++.|++..+|||||||||
T Consensus 78 ~~~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~ad~d~p~~~V~gvN~~~~~~~~~iIsnpsCtt 157 (339)
T 2x5j_O 78 LHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTT 157 (339)
T ss_dssp ECCSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHH
T ss_pred EecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccccCCCCceeecccCHHHhcCCCCEEECCCcHH
Confidence 9889999999988899999999999999999999999999999999998 6788 9999999999986568999999999
Q ss_pred HhHHHHHHHHHhhcCceEEEEEEEeeccCCCC
Q 029791 157 NCLAPLAKVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 157 ~~lap~l~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
|||+|+++|||++|||+++.|||+||+|++|+
T Consensus 158 n~lap~lkpL~~~~gI~~~~~ttvha~Tg~q~ 189 (339)
T 2x5j_O 158 NCIIPVIKLLDDAYGIESGTVTTIHSAMHDQQ 189 (339)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEECCC----
T ss_pred HHHHHHHHHHHHccCcceeeEEEEEecccccc
Confidence 99999999999999999999999999999985
No 23
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.7e-45 Score=319.45 Aligned_cols=167 Identities=20% Similarity=0.216 Sum_probs=146.8
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcc--cccCcC--CCcce-EEeCCCeeEECCEE
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYD--SVHGQW--KHHEL-KVKDDKTLLFGEKP 75 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yD--S~~g~~--~~~~v-~~~~~~~l~i~g~~ 75 (188)
|| +||||||||||||.++|++.+++++++++|||. ++++++||++|| |+||+| . +++ +++++ .+.++|
T Consensus 1 Mm-ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~--~~~~~~~l~~~dg~s~~g~~~~~-~~v~~~~~~-~l~v~~-- 73 (343)
T 2yyy_A 1 MP-AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKT--KPDFEARLAVEKGYKLFVAIPDN-ERVKLFEDA-GIPVEG-- 73 (343)
T ss_dssp -C-EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEES--SCSHHHHHHHHTTCCEEESSCCH-HHHHHHHHT-TCCCCC--
T ss_pred Cc-eEEEEECCCHHHHHHHHHHHhCCCceEEEEecC--CHHHHHHHHHhcCCccccccCCC-ceeecccCC-eEEECC--
Confidence 64 899999999999999999999889999999997 589999999999 999998 5 555 44444 477765
Q ss_pred EEEEeecCCCCCCcccCCccEEEeecCcccCHHhHH-HHHhCCCcEEEEeCCCC-C-CC-eEEeecCccCCCCCCceEEc
Q 029791 76 VTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAA-AHLKGGAKKVIISAPSK-D-AP-MFVVGVNENEYKPELNIVSN 151 (188)
Q Consensus 76 i~v~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~-~h~~~Gakkviis~ps~-d-~p-~~V~gvN~~~~~~~~~iis~ 151 (188)
+++.+.| ++|+||||||.+.+.+.++ .|+++|+ +||+|+|++ | +| +||||||++.|++ ++||||
T Consensus 74 -------~~~~~~~---~vDiV~eatg~~~s~~~a~~~~l~aG~-~VI~sap~~~d~vp~~vV~gvN~~~~~~-~~iIsn 141 (343)
T 2yyy_A 74 -------TILDIIE---DADIVVDGAPKKIGKQNLENIYKPHKV-KAILQGGEKAKDVEDNFNALWSYNRCYG-KDYVRV 141 (343)
T ss_dssp -------BGGGTGG---GCSEEEECCCTTHHHHHHHHTTTTTTC-EEEECTTSCGGGSSEEECTTTTHHHHTT-CSEEEE
T ss_pred -------chHHhcc---CCCEEEECCCccccHHHHHHHHHHCCC-EEEECCCccccCCCceEEcccCHHHhcc-CCEEec
Confidence 3445556 7999999999999999996 9999995 599999976 5 78 9999999999985 789999
Q ss_pred CChhhHhHHHHHHHHHhhcCceEEEEEEEeeccCC
Q 029791 152 ASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGI 186 (188)
Q Consensus 152 ~sCtT~~lap~l~~l~~~~gI~~~~~ttiha~t~~ 186 (188)
||||||||+|++|+||++|||+++.|||+|++|+.
T Consensus 142 ~sCtT~~lap~lk~L~~~fgI~~~~vtT~~a~sg~ 176 (343)
T 2yyy_A 142 VSCNTTGLCRILYAINSIADIKKARIVLVRRAADP 176 (343)
T ss_dssp CCHHHHHHHHHHHHHHTTSEEEEEEEEEEEESSCT
T ss_pred cchhhHHHHHHHHHHHHHcCceEEEEEeeeeccCc
Confidence 99999999999999999999999999999999973
No 24
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=2.9e-36 Score=260.78 Aligned_cols=164 Identities=21% Similarity=0.254 Sum_probs=139.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcc--cccCcCCCcce-EEeCCCeeEECCEEEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYD--SVHGQWKHHEL-KVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yD--S~~g~~~~~~v-~~~~~~~l~i~g~~i~v~~ 80 (188)
+||||+|+|+||+.++|.+.+.|++++++|+|. +++..+++++|| ++||+|. +.+ .+++. .+.+++.
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~--~~~~~~~~~~~~g~~~~~~~~-~~v~~~~~~-~l~v~~~------ 71 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKT--RPDFEARMALKKGYDLYVAIP-ERVKLFEKA-GIEVAGT------ 71 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEES--SCSHHHHHHHHTTCCEEESSG-GGHHHHHHT-TCCCCEE------
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcC--ChhHHHHhcCCcchhhccccc-cceeeecCC-ceEEcCC------
Confidence 799999999999999999998899999999997 567788999988 8999988 654 33322 3555532
Q ss_pred ecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCC-CC--CeEEeecCccCCCCCCceEEcCChhhH
Q 029791 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DA--PMFVVGVNENEYKPELNIVSNASCTTN 157 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~-d~--p~~V~gvN~~~~~~~~~iis~~sCtT~ 157 (188)
++++.| ++|+||+|||.+.+.+.++.|+++|++ ||+++|.+ |. |++|||+|++.+++ .++||||||+||
T Consensus 72 ---~~~~~~---~vDvV~~atp~~~~~~~a~~~l~aG~~-VId~sp~~~d~~~~~~V~gvN~e~~~~-~~iIanp~C~tt 143 (337)
T 1cf2_P 72 ---VDDMLD---EADIVIDCTPEGIGAKNLKMYKEKGIK-AIFQGGEKHEDIGLSFNSLSNYEESYG-KDYTRVVSCNTT 143 (337)
T ss_dssp ---HHHHHH---TCSEEEECCSTTHHHHHHHHHHHHTCC-EEECTTSCHHHHSCEECHHHHGGGGTT-CSEEEECCHHHH
T ss_pred ---HHHHhc---CCCEEEECCCchhhHHHHHHHHHcCCE-EEEecCCCCccCCCeEEeeeCHHHhcC-CCEEEcCCcHHH
Confidence 222223 799999999999999999999999975 88887765 33 99999999999985 689999999999
Q ss_pred hHHHHHHHHHhhcCceEEEEEEEeeccC
Q 029791 158 CLAPLAKVIHDKFGIVEGLMTTVHSITG 185 (188)
Q Consensus 158 ~lap~l~~l~~~~gI~~~~~ttiha~t~ 185 (188)
||+|+|+||+++|||+++.|||+|++|+
T Consensus 144 ~l~~~l~pL~~~~gI~~~~vtt~~a~s~ 171 (337)
T 1cf2_P 144 GLCRTLKPLHDSFGIKKVRAVIVRRGAD 171 (337)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEESSC
T ss_pred HHHHHHHHHHHhcCcceeEEEEEEEeec
Confidence 9999999999999999999999999886
No 25
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=100.00 E-value=5.1e-33 Score=240.32 Aligned_cols=155 Identities=26% Similarity=0.304 Sum_probs=130.1
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcC--CCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEE
Q 029791 1 MGKVKIGING-FGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVT 77 (188)
Q Consensus 1 m~~~kvgI~G-~GriGr~~~r~~~~~--~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~ 77 (188)
|+++||||+| +|++|+.++|.+.++ |+++++++++.. + . |+.+.++|+.+.
T Consensus 1 ~~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~-------------~-----~--------G~~~~~~~~~i~ 54 (336)
T 2r00_A 1 SQQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASER-------------S-----E--------GKTYRFNGKTVR 54 (336)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTT-------------T-----T--------TCEEEETTEEEE
T ss_pred CCccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCC-------------C-----C--------CCceeecCceeE
Confidence 3458999999 999999999999988 789999999751 0 0 223557777777
Q ss_pred EEeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCC-----CCCeEEeecCccCCCCC--CceEE
Q 029791 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKPE--LNIVS 150 (188)
Q Consensus 78 v~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~-----d~p~~V~gvN~~~~~~~--~~iis 150 (188)
+ .+.+++ +|. ++|+||+|+|.+.+++.++.|+++|++ +|+.+++ +.|++|||+|++.|++. .++||
T Consensus 55 ~-~~~~~~--~~~--~vDvVf~a~g~~~s~~~a~~~~~~G~~--vId~s~~~R~~~~~~~~vpevN~~~i~~~~~~~iIa 127 (336)
T 2r00_A 55 V-QNVEEF--DWS--QVHIALFSAGGELSAKWAPIAAEAGVV--VIDNTSHFRYDYDIPLVVPEVNPEAIAEFRNRNIIA 127 (336)
T ss_dssp E-EEGGGC--CGG--GCSEEEECSCHHHHHHHHHHHHHTTCE--EEECSSTTTTCTTSCBCCTTTCGGGGGGGGGTTEEE
T ss_pred E-ecCChH--Hhc--CCCEEEECCCchHHHHHHHHHHHcCCE--EEEcCCccccCCCCCeEeccCCHHHhccccCCcEEE
Confidence 6 344554 684 899999999999999999999999994 5555543 57999999999999852 56999
Q ss_pred cCChhhHhHHHHHHHHHhhcCceEEEEEEEeeccCCCC
Q 029791 151 NASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 151 ~~sCtT~~lap~l~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
||||+|||++|+|+||+++|||+++.|||+|++|++|+
T Consensus 128 np~C~tt~~~~~l~pL~~~~~i~~~~vtt~~~~SgaG~ 165 (336)
T 2r00_A 128 NPNCSTIQMLVALKPIYDAVGIERINVTTYQSVSGAGK 165 (336)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCEEEEEEEEEEESSSCCT
T ss_pred CCChHHHHHHHHHHHHHHhCCccEEEEEEEEecccCCh
Confidence 99999999999999999999999999999999999974
No 26
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=3.6e-34 Score=247.08 Aligned_cols=166 Identities=23% Similarity=0.279 Sum_probs=139.8
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcc--cccCcCCCcce-EEeCCCeeEECCEEEEE
Q 029791 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYD--SVHGQWKHHEL-KVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 2 ~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yD--S~~g~~~~~~v-~~~~~~~l~i~g~~i~v 78 (188)
|++||||+|+|+|||.++|++.+.|++++++|+|. +++.+.++++|| ++||+|. +.+ .++++ .+.+.+
T Consensus 1 M~irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~--~~~~~~~~~~~~g~~~~~~~~-~~v~~~~~~-~~~v~~----- 71 (334)
T 2czc_A 1 MKVKVGVNGYGTIGKRVAYAVTKQDDMELIGITKT--KPDFEAYRAKELGIPVYAASE-EFIPRFEKE-GFEVAG----- 71 (334)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEES--SCSHHHHHHHHTTCCEEESSG-GGHHHHHHH-TCCCSC-----
T ss_pred CCcEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcC--CHHHHHHHHHhcCcccccccc-ccceeccCC-ceEEcC-----
Confidence 14899999999999999999999999999999997 578888999988 8999987 554 22121 133332
Q ss_pred EeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCC-C-C-CeEEeecCccCCCCCCceEEcCChh
Q 029791 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-D-A-PMFVVGVNENEYKPELNIVSNASCT 155 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~-d-~-p~~V~gvN~~~~~~~~~iis~~sCt 155 (188)
+++++.| ++|+|++|||.+.+.+.++.|+++|+ +||+++|.+ | . |++|+|+|++.|.. .++|+||||+
T Consensus 72 ----d~~~l~~---~vDvV~~aTp~~~h~~~a~~~l~aGk-~Vi~sap~~~d~~~~~~v~~vn~~~~~~-~~ii~~~~C~ 142 (334)
T 2czc_A 72 ----TLNDLLE---KVDIIVDATPGGIGAKNKPLYEKAGV-KAIFQGGEKADVAEVSFVAQANYEAALG-KNYVRVVSCN 142 (334)
T ss_dssp ----BHHHHHT---TCSEEEECCSTTHHHHHHHHHHHHTC-EEEECTTSCGGGSSEEECHHHHGGGGTT-CSEEEECCHH
T ss_pred ----cHHHhcc---CCCEEEECCCccccHHHHHHHHHcCC-ceEeecccccccccceEEeccCHHHHhh-CCcEEecCcH
Confidence 3444434 79999999999999999999999995 689998875 4 4 59999999998874 6899999999
Q ss_pred hHhHHHHHHHHHhhcCceEEEEEEEeeccCCC
Q 029791 156 TNCLAPLAKVIHDKFGIVEGLMTTVHSITGIV 187 (188)
Q Consensus 156 T~~lap~l~~l~~~~gI~~~~~ttiha~t~~q 187 (188)
||||+|++++|++. |+++.|+|+|++|+.|
T Consensus 143 t~~l~P~~~~l~~~--I~~g~i~ti~a~s~~~ 172 (334)
T 2czc_A 143 TTGLVRTLSAIREY--ADYVYAVMIRRAADPN 172 (334)
T ss_dssp HHHHHHHHHHHGGG--EEEEEEEEEEESSCTT
T ss_pred HHHHHHHHHHHHHH--hccccEEEEEEecCcc
Confidence 99999999999987 9999999999999986
No 27
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=2.4e-33 Score=242.79 Aligned_cols=167 Identities=19% Similarity=0.254 Sum_probs=125.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
+||||+|+|+|||.++|++.++|++++++|+|. +++...++++++- +-.+. .. +-..+ +++..+.+. .+
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~--~~~~~~~~a~~~g-~~~~~-~~----~~~~~-~~~~~v~v~--~~ 70 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKT--SPNYEAFIAHRRG-IRIYV-PQ----QSIKK-FEESGIPVA--GT 70 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS--SCSHHHHHHHHTT-CCEEC-CG----GGHHH-HHTTTCCCC--CC
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcC--ChHHHHHHHHhcC-cceec-Cc----CHHHH-hcccccccc--cC
Confidence 799999999999999999999999999999997 5677778877531 00000 00 00000 110001110 01
Q ss_pred CCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCC--CCeEEeecCccCCCCCCceEEcCChhhHhHHH
Q 029791 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD--APMFVVGVNENEYKPELNIVSNASCTTNCLAP 161 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d--~p~~V~gvN~~~~~~~~~iis~~sCtT~~lap 161 (188)
++++ + .++|+||+|||.+.+++.++.|+++|+|++.+|++..+ +++|++++|++.+.+ .++|+|||||||||+|
T Consensus 71 ~e~l-~--~~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~sa~~~~~~~~~~v~~vN~~~~~~-~~iIsnpsCtt~~l~~ 146 (340)
T 1b7g_O 71 VEDL-I--KTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFSALCNYNEALG-KKYIRVVSCNTTALLR 146 (340)
T ss_dssp HHHH-H--HHCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSCGGGSSCEECHHHHHHHHTT-CSEEEECCHHHHHHHH
T ss_pred HhHh-h--cCCCEEEECCCCchhHHHHHHHHHcCCeEEEeCCCCCCCCCCEEEcCcchHHHcC-CCCcccCCcHHHHHHH
Confidence 1111 1 26899999999999999999999999988777777554 479999999776543 3599999999999999
Q ss_pred HHHHHHhhcCceEEEEEEEeeccC
Q 029791 162 LAKVIHDKFGIVEGLMTTVHSITG 185 (188)
Q Consensus 162 ~l~~l~~~~gI~~~~~ttiha~t~ 185 (188)
++++|+++|||+++.|||+|+++.
T Consensus 147 ~lk~L~~~~gI~~~~~tt~~~~~~ 170 (340)
T 1b7g_O 147 TICTVNKVSKVEKVRATIVRRAAD 170 (340)
T ss_dssp HHHHHHTTSCEEEEEEEEEEESSC
T ss_pred HHHHHHHhCCeEEEEEEEEeccCC
Confidence 999999999999999999999863
No 28
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=99.98 E-value=2.5e-32 Score=235.65 Aligned_cols=151 Identities=23% Similarity=0.370 Sum_probs=123.9
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeec
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
+||||+| +|++||.++|.+.++. ++++.+ +++... +. .|+.+.++|+.+.++.+
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~-~~~~~l-----------~~~~s~-----------~~-~g~~l~~~g~~i~v~~~- 55 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARN-FPLSEL-----------RLYASP-----------RS-AGVRLAFRGEEIPVEPL- 55 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTT-CCCSCC-----------EEEECG-----------GG-SSCEEEETTEEEEEEEC-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-CCcEEE-----------EEeecc-----------cc-CCCEEEEcCceEEEEeC-
Confidence 4899999 9999999999998542 321111 112100 00 24468899999998775
Q ss_pred CCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCC-----CCCeEEeecCccCCCCCCceEEcCChhhH
Q 029791 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKPELNIVSNASCTTN 157 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~-----d~p~~V~gvN~~~~~~~~~iis~~sCtT~ 157 (188)
+|+ +| ++|+||+|+|.|.+++.++.|+++|+ ++|+.+++ |.|++|||||++.|++..++||||||+||
T Consensus 56 ~~~--~~---~~DvV~~a~g~~~s~~~a~~~~~~G~--~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~iIanp~C~tt 128 (331)
T 2yv3_A 56 PEG--PL---PVDLVLASAGGGISRAKALVWAEGGA--LVVDNSSAWRYEPWVPLVVPEVNREKIFQHRGIIANPNCTTA 128 (331)
T ss_dssp CSS--CC---CCSEEEECSHHHHHHHHHHHHHHTTC--EEEECSSSSTTCTTSCBCCTTSCGGGGGGCSSEEECCCHHHH
T ss_pred Chh--hc---CCCEEEECCCccchHHHHHHHHHCCC--EEEECCCccccCCCCCEEEcCcCHHHhcCCCCEEECCCHHHH
Confidence 565 58 89999999999999999999999999 46666654 58999999999999864679999999999
Q ss_pred hHHHHHHHHHhhcCceEEEEEEEeeccCC
Q 029791 158 CLAPLAKVIHDKFGIVEGLMTTVHSITGI 186 (188)
Q Consensus 158 ~lap~l~~l~~~~gI~~~~~ttiha~t~~ 186 (188)
|++|+|+||+++|||+++.|||+|++|++
T Consensus 129 ~~~~~l~pL~~~~~I~~~~vtt~~~~Sga 157 (331)
T 2yv3_A 129 ILAMALWPLHRAFQAKRVIVATYQAASGA 157 (331)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEBCGGGG
T ss_pred HHHHHHHHHHHhCCceEEEEEEEeecccC
Confidence 99999999999999999999999999997
No 29
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=99.98 E-value=2e-32 Score=236.93 Aligned_cols=156 Identities=13% Similarity=0.150 Sum_probs=130.1
Q ss_pred CccEEEEEc-cChHHHHHHHHHH--cCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEE
Q 029791 2 GKVKIGING-FGRIGRLVARVIL--QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 2 ~~~kvgI~G-~GriGr~~~r~~~--~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
|++||+|+| +|++|+.++|.+. ..|.++++++++.. + . |+.+.++|+.+.+
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~-------------~-~------------g~~~~~~g~~i~~ 58 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE-------------S-A------------GQRMGFAESSLRV 58 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT-------------T-T------------TCEEEETTEEEEC
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCC-------------C-C------------CCccccCCcceEE
Confidence 357999999 9999999999998 55889999998751 0 1 1234466766666
Q ss_pred EeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCC--CCeEEeecCccCCCCCC--ceEEcCCh
Q 029791 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD--APMFVVGVNENEYKPEL--NIVSNASC 154 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d--~p~~V~gvN~~~~~~~~--~iis~~sC 154 (188)
. +.+++. |. ++|+||+|+|.+.+++.++.|+++|+|+|.+|++..| .|++||++|++.|++.. ++||||||
T Consensus 59 ~-~~~~~~--~~--~~DvV~~a~g~~~s~~~a~~~~~aG~kvId~Sa~~rd~~~~~~vpevN~~~i~~~~~~~iIanp~C 133 (340)
T 2hjs_A 59 G-DVDSFD--FS--SVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGALEPSVAPPVMVSVNAERLASQAAPFLLSSPCA 133 (340)
T ss_dssp E-EGGGCC--GG--GCSEEEECSCHHHHHHHHHHHHHTTCEEEETTCTTTTTTSCBCCHHHHGGGGGGSCSSCEEECCCH
T ss_pred e-cCCHHH--hc--CCCEEEEcCCcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCeEEcCcCHHHHhcCcCCCEEEcCCH
Confidence 3 345544 75 8999999999999999999999999987666777543 68999999999998532 79999999
Q ss_pred hhHhHHHHHHHHHhhcCceEEEEEEEeeccCCCC
Q 029791 155 TTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 155 tT~~lap~l~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
+|||++|+++||+++|||+++.|||+|++|++|+
T Consensus 134 ~tt~~~~~l~pL~~~~~i~~~~v~t~~~~SgaG~ 167 (340)
T 2hjs_A 134 VAAELCEVLAPLLATLDCRQLNLTACLSVSSLGR 167 (340)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEEEEEECGGGGCH
T ss_pred HHHHHHHHHHHHHHhcCcceEEEEEecccCCCCc
Confidence 9999999999999999999999999999999984
No 30
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=99.97 E-value=8.2e-33 Score=241.70 Aligned_cols=157 Identities=17% Similarity=0.161 Sum_probs=127.6
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeec
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
+||||+| +|++|+.++|.+++..+++++.| +++.||| +|+-- . .++|+.+.+....
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i-----------~~~~~~s-~G~~v----~-------~~~g~~i~~~~~~ 58 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRP-----------VFFSTSQ-LGQAA----P-------SFGGTTGTLQDAF 58 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEE-----------EEEESSS-TTSBC----C-------GGGTCCCBCEETT
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEE-----------EEEEeCC-CCCCc----c-------ccCCCceEEEecC
Confidence 6999999 99999999995554444543333 6677776 66521 1 1334455555544
Q ss_pred CCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCC-----CCCeEEeecCccCCCCC--C--ceEEcCC
Q 029791 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKPE--L--NIVSNAS 153 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~-----d~p~~V~gvN~~~~~~~--~--~iis~~s 153 (188)
++++ |. ++|+||+|+|.+.+++.++.|+++|+|++||++|++ |.|++|||||++.|++. . ++|+|||
T Consensus 59 ~~~~--~~--~~DvVf~a~g~~~s~~~a~~~~~~G~k~vVID~ss~~R~~~~~~~~vpevN~~~i~~~~~~g~~~Ianp~ 134 (367)
T 1t4b_A 59 DLEA--LK--ALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFVGGN 134 (367)
T ss_dssp CHHH--HH--TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEECC
T ss_pred ChHH--hc--CCCEEEECCCchhHHHHHHHHHHCCCCEEEEcCChhhccCCCCcEEeCCcCHHHHhhhhhcCCCEEEeCC
Confidence 4544 74 899999999999999999999999998899999986 58999999999988742 1 6999999
Q ss_pred hhhHhHHHHHHHHHhhcCceEEEEEEEeeccCCC
Q 029791 154 CTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIV 187 (188)
Q Consensus 154 CtT~~lap~l~~l~~~~gI~~~~~ttiha~t~~q 187 (188)
|+|+|++|+|++|+++++|+++.|||+|++|+++
T Consensus 135 Cttt~~~~al~pL~~~~~I~~~~vtt~~a~SGaG 168 (367)
T 1t4b_A 135 CTVSLMLMSLGGLFANDLVDWVSVATYQAASGGG 168 (367)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTC
T ss_pred HHHHHHHHHHHHHHHcCCCcEEEEEEEecccccc
Confidence 9999999999999999999999999999999985
No 31
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=99.97 E-value=6.2e-32 Score=234.58 Aligned_cols=167 Identities=17% Similarity=0.222 Sum_probs=133.1
Q ss_pred CccEEEEEc-cChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEe
Q 029791 2 GKVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 2 ~~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
+++||||+| +|++|+.++|.+.++|+++++++++...+.. -+||++|+.+. ++ .+.++++.+.+ +
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g-----~~~~~~~~~~~-------~~-~~~~~~~~~~~-~ 68 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIG-----KKYKDAVKWIE-------QG-DIPEEVQDLPI-V 68 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTT-----SBHHHHCCCCS-------SS-SCCHHHHTCBE-E
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcC-----CCHHHhcCccc-------cc-ccccCCceeEE-e
Confidence 368999999 9999999999999999999999985311111 13677776552 11 13333333334 3
Q ss_pred ecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCC-----CCCeEEeecCccCCCC----------C
Q 029791 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKP----------E 145 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~-----d~p~~V~gvN~~~~~~----------~ 145 (188)
+.+++. |. ++|+||+|+|.+.+.+.++.|+++|+| ||+.+++ +.|+++||+|++.|+. .
T Consensus 69 ~~d~~~--~~--~vDvVf~atp~~~s~~~a~~~~~aG~~--VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~ 142 (350)
T 2ep5_A 69 STNYED--HK--DVDVVLSALPNELAESIELELVKNGKI--VVSNASPFRMDPDVPLINPEINWEHLELLKFQKERKGWK 142 (350)
T ss_dssp CSSGGG--GT--TCSEEEECCCHHHHHHHHHHHHHTTCE--EEECSSTTTTCTTSCBCCHHHHGGGGGGHHHHHHHHTCS
T ss_pred eCCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCE--EEECCccccCCCCCCeeCCccCHHHhcChHhhhhhcccC
Confidence 334443 53 899999999999999999999999995 7888875 5899999999998873 2
Q ss_pred CceEEcCChhhHhHHHHHHHHHhhcCceEEEEEEEeeccCCCC
Q 029791 146 LNIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 146 ~~iis~~sCtT~~lap~l~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
.++||||||+|||++|+|+||+++|||+++.|||+|++|++|+
T Consensus 143 ~~iIanpgC~tt~~~l~l~pL~~~~gi~~i~v~t~~~~SGaG~ 185 (350)
T 2ep5_A 143 GILVKNPNCTAAIMSMPIKPLIEIATKSKIIITTLQAVSGAGY 185 (350)
T ss_dssp SEEEECCCHHHHHHHHHHGGGHHHHHTSEEEEEEEECGGGGCS
T ss_pred ceEEEcCchHHHHHHHHHHHHHHhcCCcEEEEEEEEecCcCCC
Confidence 3599999999999999999999999999999999999999985
No 32
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=99.97 E-value=7.1e-31 Score=228.04 Aligned_cols=168 Identities=23% Similarity=0.317 Sum_probs=131.7
Q ss_pred CccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec-CCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEE
Q 029791 2 GKVKIGING-FGRIGRLVARVILQRDDVELVAVND-PFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 2 ~~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd-~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|++||||+| +|++|+.++|.+.++|+++++++++ +....+ ++|+.|+.+. .. .+..+++.+.+
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~------~~~~~~~~~~-~~-------~~~~~~~~~~~- 71 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGK------KYKDACYWFQ-DR-------DIPENIKDMVV- 71 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTS------BHHHHSCCCC-SS-------CCCHHHHTCBC-
T ss_pred ccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccc------cHHHhccccc-cc-------ccccCceeeEE-
Confidence 347999999 9999999999999889999999985 321111 2466676542 10 01112222223
Q ss_pred eecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCC-----CCCeEEeecCccCCCC----------
Q 029791 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKP---------- 144 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~-----d~p~~V~gvN~~~~~~---------- 144 (188)
.+.++++ |.+.++|+||+|+|.+.+.+.++.|+++|++ |||+|++ +.|+++|++|++.|+.
T Consensus 72 ~~~~~~~--~~~~~~DvV~~atp~~~~~~~a~~~~~aG~~--VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~ 147 (354)
T 1ys4_A 72 IPTDPKH--EEFEDVDIVFSALPSDLAKKFEPEFAKEGKL--IFSNASAYRMEEDVPLVIPEVNADHLELIEIQREKRGW 147 (354)
T ss_dssp EESCTTS--GGGTTCCEEEECCCHHHHHHHHHHHHHTTCE--EEECCSTTTTCTTSCBCCHHHHGGGGGHHHHHHHHHCC
T ss_pred EeCCHHH--HhcCCCCEEEECCCchHHHHHHHHHHHCCCE--EEECCchhcCCCCCCccCcccCHHHhcChhhhhhhccc
Confidence 2235554 6445899999999999999999999999994 8999875 4789999999998873
Q ss_pred CCceEEcCChhhHhHHHHHHHHHhhcCceEEEEEEEeeccCCCC
Q 029791 145 ELNIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 145 ~~~iis~~sCtT~~lap~l~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
..++|+||+|+|||++|+|+||+++|||+++.|+|+|++|++|+
T Consensus 148 ~~~iIanpgC~tt~~~l~l~pL~~~~gi~~~~v~t~~~~SGaG~ 191 (354)
T 1ys4_A 148 DGAIITNPNCSTICAVITLKPIMDKFGLEAVFIATMQAVSGAGY 191 (354)
T ss_dssp SSEEEECCCHHHHHHHHHHHHHHHHHCCSEEEEEEEBCSGGGCT
T ss_pred CCeEEECCCHHHHHHHHHHHHHHHhcCCcEEEEEEEEEcCcCCc
Confidence 23599999999999999999999999999999999999999985
No 33
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=99.96 E-value=1.4e-30 Score=226.87 Aligned_cols=159 Identities=13% Similarity=0.159 Sum_probs=130.1
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEE
Q 029791 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|+++||||+| +|++||.++|.+.++|+++++++++.. +.. .+||++|++|. +.+ . . .+.+
T Consensus 14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~-~~g-----~~~~~~~~~~~-~~v-~--~-dl~~-------- 74 (359)
T 1xyg_A 14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADR-KAG-----QSMESVFPHLR-AQK-L--P-TLVS-------- 74 (359)
T ss_dssp -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCST-TTT-----SCHHHHCGGGT-TSC-C--C-CCBC--------
T ss_pred ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCch-hcC-----CCHHHhCchhc-Ccc-c--c-ccee--------
Confidence 4458999999 999999999999999999999999862 222 56899999887 432 1 1 1222
Q ss_pred eecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCC---C------------------CeEEeec-
Q 029791 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD---A------------------PMFVVGV- 137 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d---~------------------p~~V~gv- 137 (188)
+ + ++ .|. ++|+||+|+|.+.+++.++.| ++|+ ++|+.+++. . |.+|+|+
T Consensus 75 ~--~-~~-~~~--~vDvVf~atp~~~s~~~a~~~-~aG~--~VId~sa~~R~~~~~~y~~~y~~~~~~~~~l~~~vygvp 145 (359)
T 1xyg_A 75 V--K-DA-DFS--TVDAVFCCLPHGTTQEIIKEL-PTAL--KIVDLSADFRLRNIAEYEEWYGQPHKAVELQKEVVYGLT 145 (359)
T ss_dssp G--G-GC-CGG--GCSEEEECCCTTTHHHHHHTS-CTTC--EEEECSSTTTCSCHHHHHHHHSSCCSCHHHHTTCEECCH
T ss_pred c--c-hh-Hhc--CCCEEEEcCCchhHHHHHHHH-hCCC--EEEECCccccCCchhhhhhhhcCCcCChhhcCCceEECC
Confidence 1 1 22 575 899999999999999999999 9999 467777642 2 4677777
Q ss_pred --CccCCCCCCceEEcCChhhHhHHHHHHHHHhhcCce--EEEEEEEeeccCCCC
Q 029791 138 --NENEYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITGIVN 188 (188)
Q Consensus 138 --N~~~~~~~~~iis~~sCtT~~lap~l~~l~~~~gI~--~~~~ttiha~t~~q~ 188 (188)
|++.++. .++||||||+|||++|+|+||+++|+|+ ++.|+|+|++|++|+
T Consensus 146 E~n~~~i~~-~~iIanpgC~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~ 199 (359)
T 1xyg_A 146 EILREDIKK-ARLVANPGCYPTTIQLPLVPLLKANLIKHENIIIDAKSGVSGAGR 199 (359)
T ss_dssp HHHHHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCSSSCEEEEEEEGGGGCS
T ss_pred ccCHHHhcc-CCEEECCCcHHHHHHHHHHHHHHcCCCCCCeEEEEEEEEccccCc
Confidence 9999875 6899999999999999999999999999 999999999999985
No 34
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=99.96 E-value=3.5e-29 Score=217.00 Aligned_cols=158 Identities=16% Similarity=0.073 Sum_probs=126.8
Q ss_pred CC-ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEE
Q 029791 1 MG-KVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 1 m~-~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
|| ++||||+| +|+|||.++|.+.++|+++++++++.. +.. .+|++.|++|. +. ..+. +
T Consensus 1 M~~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~-~~g-----~~~~~~~~~~~-g~------~~~~-------~ 60 (345)
T 2ozp_A 1 MTGKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRR-FAG-----EPVHFVHPNLR-GR------TNLK-------F 60 (345)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCST-TTT-----SBGGGTCGGGT-TT------CCCB-------C
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECch-hhC-----chhHHhCchhc-Cc------cccc-------c
Confidence 54 58999999 899999999999999999999999852 222 46888898876 32 1121 1
Q ss_pred EeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCC---CC-----------------CeEEeec-
Q 029791 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK---DA-----------------PMFVVGV- 137 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~---d~-----------------p~~V~gv- 137 (188)
.+++ +| .++|+||+|+|.+.+.+.++.|+++|++ ||+.+++ +. +.+++|+
T Consensus 61 ---~~~~--~~--~~vDvV~~a~g~~~s~~~a~~~~~aG~~--VId~Sa~~r~~~~~~y~~~y~~h~~~e~l~~~vygvp 131 (345)
T 2ozp_A 61 ---VPPE--KL--EPADILVLALPHGVFAREFDRYSALAPV--LVDLSADFRLKDPELYRRYYGEHPRPDLLGRFVYAVP 131 (345)
T ss_dssp ---BCGG--GC--CCCSEEEECCCTTHHHHTHHHHHTTCSE--EEECSSTTSCSCHHHHHHHHCCCSSGGGTTSSEECCH
T ss_pred ---cchh--Hh--cCCCEEEEcCCcHHHHHHHHHHHHCCCE--EEEcCccccCCChHHHHhhhccccchhhhccCcEecc
Confidence 1222 37 3899999999999999999999999995 5666543 11 3566666
Q ss_pred --CccCCCCCCceEEcCChhhHhHHHHHHHHHhhcCce--EEEEEEEeeccCCCC
Q 029791 138 --NENEYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITGIVN 188 (188)
Q Consensus 138 --N~~~~~~~~~iis~~sCtT~~lap~l~~l~~~~gI~--~~~~ttiha~t~~q~ 188 (188)
|.+.++. .++||||||+|||++|+|+||+++|+|+ ++.|+|+|++|++|+
T Consensus 132 E~n~~~i~~-~~iIanp~C~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~ 185 (345)
T 2ozp_A 132 ELYREALKG-ADWIAGAGCNATATLLGLYPLLKAGVLKPTPIFVTLLISTSAGGA 185 (345)
T ss_dssp HHHHHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCSSCEEEEEEECSGGGCS
T ss_pred ccCHHHhhc-CCEEeCCCcHHHHHHHHHHHHHHhcCCCCCeEEEEEEEEccccCc
Confidence 9998875 6899999999999999999999999999 999999999999984
No 35
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=99.94 E-value=1e-26 Score=202.98 Aligned_cols=152 Identities=18% Similarity=0.318 Sum_probs=123.8
Q ss_pred CccEEEEEc-cChHHHHHHHHHHcC--CCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEE
Q 029791 2 GKVKIGING-FGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 2 ~~~kvgI~G-~GriGr~~~r~~~~~--~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
|++||||+| .|.+|+.++|.|.++ |.++++.+.... | .|+.+.+.|+.+.+
T Consensus 1 m~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~-------------s-------------aG~~~~~~~~~~~~ 54 (366)
T 3pwk_A 1 MGYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASAR-------------S-------------AGKSLKFKDQDITI 54 (366)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTT-------------T-------------TTCEEEETTEEEEE
T ss_pred CCcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccc-------------c-------------CCCcceecCCCceE
Confidence 248999999 899999999988887 666766665321 0 13445667776665
Q ss_pred EeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCC-----CCCeEEeecCccCCCCCCceEEcCC
Q 029791 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKPELNIVSNAS 153 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~-----d~p~~V~gvN~~~~~~~~~iis~~s 153 (188)
++-+++. |. ++|+||+|+|.+.+++.++.|+++|++ +|+.+++ ++|++|||||.+.++...++||||+
T Consensus 55 -~~~~~~~--~~--~~Dvvf~a~~~~~s~~~a~~~~~~G~~--vIDlSa~~R~~~~~p~~vpevN~~~i~~~~~iIanpg 127 (366)
T 3pwk_A 55 -EETTETA--FE--GVDIALFSAGSSTSAKYAPYAVKAGVV--VVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIACPN 127 (366)
T ss_dssp -EECCTTT--TT--TCSEEEECSCHHHHHHHHHHHHHTTCE--EEECSSTTTTCTTSCBCCHHHHGGGGTTCCSEEECCC
T ss_pred -eeCCHHH--hc--CCCEEEECCChHhHHHHHHHHHHCCCE--EEEcCCccccCCCceEEEccCCHHHHcCCCCeEECCC
Confidence 3334443 43 899999999999999999999999994 5666642 4799999999999976568999999
Q ss_pred hhhHhHHHHHHHHHhhcCceEEEEEEEeeccCC
Q 029791 154 CTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGI 186 (188)
Q Consensus 154 CtT~~lap~l~~l~~~~gI~~~~~ttiha~t~~ 186 (188)
|+|||++|+|+||+++|+|+++.|+|+|++|+.
T Consensus 128 C~tt~~~l~l~pL~~~~~i~~i~v~t~~~vSGA 160 (366)
T 3pwk_A 128 CSTIQMMVALEPVRQKWGLDRIIVSTYQAVSGA 160 (366)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEEEEEBCGGGG
T ss_pred cHHHHHHHHHHHHHHhCCCcEEEEEEEEecccc
Confidence 999999999999999999999999999999975
No 36
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=99.94 E-value=2.1e-26 Score=199.61 Aligned_cols=150 Identities=24% Similarity=0.391 Sum_probs=123.4
Q ss_pred cEEEEEc-cChHHHHHHHHHHcC--CCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEe
Q 029791 4 VKIGING-FGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~--~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
+||||+| .|.+|+.++|.|.++ |.++++.+.... | .|+.+.++|+.+.+ +
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~-------------~-------------aG~~~~~~~~~~~~-~ 54 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASAR-------------S-------------QGRKLAFRGQEIEV-E 54 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTT-------------T-------------SSCEEEETTEEEEE-E
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcc-------------c-------------CCCceeecCCceEE-E
Confidence 6999999 899999999998887 666666664320 1 14456677776666 3
Q ss_pred ecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCC-----CCCeEEeecCc-cCCCCC-CceEEcCC
Q 029791 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNE-NEYKPE-LNIVSNAS 153 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~-----d~p~~V~gvN~-~~~~~~-~~iis~~s 153 (188)
+-+++ .|. ++|+||+|+|.+.+++.++.|+++|+ +||+.+++ |+|++|||||. +.++.. .++||||+
T Consensus 55 ~~~~~--~~~--~~Dvvf~a~~~~~s~~~a~~~~~~G~--~vID~Sa~~R~~~~~p~~vpevN~~~~i~~~~~~iIanpg 128 (344)
T 3tz6_A 55 DAETA--DPS--GLDIALFSAGSAMSKVQAPRFAAAGV--TVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPN 128 (344)
T ss_dssp ETTTS--CCT--TCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCTTTSHHHHTTCCTTSEEECCC
T ss_pred eCCHH--Hhc--cCCEEEECCChHHHHHHHHHHHhCCC--EEEECCCccccCCCccEEEccCCCHHHhhhcCCCEEECCC
Confidence 33443 343 89999999999999999999999999 56777753 48999999999 888753 58999999
Q ss_pred hhhHhHHHHHHHHHhhcCceEEEEEEEeeccCC
Q 029791 154 CTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGI 186 (188)
Q Consensus 154 CtT~~lap~l~~l~~~~gI~~~~~ttiha~t~~ 186 (188)
|+|||++|+|+||+++|+|+++.|+|+|++|+.
T Consensus 129 C~tt~~~l~l~pL~~~~~i~~i~v~t~~~~SGA 161 (344)
T 3tz6_A 129 CTTMAAMPVLKVLHDEARLVRLVVSSYQAVSGS 161 (344)
T ss_dssp HHHHHHHHHHHHHHHHHCEEEEEEEEEBCGGGG
T ss_pred cHHHHHHHHHHHHHHhCCCceEEEEeccCCCcc
Confidence 999999999999999999999999999999975
No 37
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=99.94 E-value=1.1e-27 Score=209.37 Aligned_cols=152 Identities=18% Similarity=0.176 Sum_probs=118.3
Q ss_pred cEEEEEc-cChHHHHHHH-HHHcCC--CceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCee-EECCEEEEE
Q 029791 4 VKIGING-FGRIGRLVAR-VILQRD--DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTL-LFGEKPVTV 78 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r-~~~~~~--~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l-~i~g~~i~v 78 (188)
+||||+| .|.+|+.++| .|.++| .++++.+.... -|+ .+ .+.|+.+.+
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~---------------aG~------------~~~~~~~~~~~~ 53 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ---------------IGV------------PAPNFGKDAGML 53 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS---------------TTS------------BCCCSSSCCCBC
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc---------------cCc------------CHHHhCCCceEE
Confidence 4899999 7999999999 888877 46666654321 111 11 023322233
Q ss_pred EeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCC-----CCCeEEeecCccCCCCC--C--ceE
Q 029791 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKPE--L--NIV 149 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~-----d~p~~V~gvN~~~~~~~--~--~ii 149 (188)
....+++. | .++|+||+|+|.+.+++.++.|+++|+|++|||+|++ |.|++|||||++.++.. + ++|
T Consensus 54 ~~~~~~~~--~--~~~Dvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~I 129 (370)
T 3pzr_A 54 HDAFDIES--L--KQLDAVITCQGGSYTEKVYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVNLKQILHGIHHGTKTF 129 (370)
T ss_dssp EETTCHHH--H--TTCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEE
T ss_pred EecCChhH--h--ccCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCCHHHHhhhhhcCCcEE
Confidence 22112222 3 3899999999999999999999999998889999974 47999999999988642 3 459
Q ss_pred EcCChhhHhHHHHHHHHHhhcCceEEEEEEEeeccCC
Q 029791 150 SNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGI 186 (188)
Q Consensus 150 s~~sCtT~~lap~l~~l~~~~gI~~~~~ttiha~t~~ 186 (188)
|||||+|||++|+|+||+++|+|+++.|||+|++|+.
T Consensus 130 anp~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGA 166 (370)
T 3pzr_A 130 VGGNCTVSLMLMALGGLYERGLVEWMSAMTYQAASGA 166 (370)
T ss_dssp EECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGT
T ss_pred EcCChHHHHHHHHHHHHHHhCCCcEEEEEeEEecccc
Confidence 9999999999999999999999999999999999974
No 38
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=99.93 E-value=2.5e-27 Score=207.51 Aligned_cols=153 Identities=17% Similarity=0.163 Sum_probs=118.1
Q ss_pred ccEEEEEc-cChHHHHHHH-HHHcCC--CceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCee-EECCEEEE
Q 029791 3 KVKIGING-FGRIGRLVAR-VILQRD--DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTL-LFGEKPVT 77 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r-~~~~~~--~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l-~i~g~~i~ 77 (188)
++||||+| .|.+|+.++| .|.++| .++++.+.... -|+ .+ .++|+.+.
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~---------------aG~------------~~~~~~~~~~~ 56 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSN---------------AGG------------KAPSFAKNETT 56 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSC---------------TTS------------BCCTTCCSCCB
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechh---------------cCC------------CHHHcCCCceE
Confidence 57999999 7999999999 777877 45665554321 011 11 02232222
Q ss_pred EEeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCC-----CCCeEEeecCccCCCCC--C--ce
Q 029791 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKPE--L--NI 148 (188)
Q Consensus 78 v~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~-----d~p~~V~gvN~~~~~~~--~--~i 148 (188)
+....+++. | .++|+||+|+|.+.+++.++.|+++|+|++|||+|++ |.|++|||||++.++.. + ++
T Consensus 57 v~~~~~~~~--~--~~vDvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~ 132 (377)
T 3uw3_A 57 LKDATSIDD--L--KKCDVIITCQGGDYTNDVFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVIKDALVNGTKN 132 (377)
T ss_dssp CEETTCHHH--H--HTCSEEEECSCHHHHHHHHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCE
T ss_pred EEeCCChhH--h--cCCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCcccccCCCCceECCcCCHHHHhhhhhcCCcE
Confidence 211112222 4 3899999999999999999999999998889999974 47999999999988642 3 35
Q ss_pred EEcCChhhHhHHHHHHHHHhhcCceEEEEEEEeeccCC
Q 029791 149 VSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGI 186 (188)
Q Consensus 149 is~~sCtT~~lap~l~~l~~~~gI~~~~~ttiha~t~~ 186 (188)
|+||||+|||++|+|+||+++|+|+++.|+|+|++|+.
T Consensus 133 Ianp~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGA 170 (377)
T 3uw3_A 133 FIGGNCTVSLMLMALGGLFRENLVDWMTAMTYQAASGA 170 (377)
T ss_dssp EEECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGT
T ss_pred EEcCCHHHHHHHHHHHHHHHhCCCCEEEEeeeeccccc
Confidence 99999999999999999999999999999999999974
No 39
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=99.93 E-value=3.2e-26 Score=199.46 Aligned_cols=167 Identities=17% Similarity=0.195 Sum_probs=122.0
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEee
Q 029791 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
++||||+| .|.+|+.++|.|.++|.++++.+......-+.+...+.+. .|..+. ... +.+ .+ ++
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~-~~~~~~-~~~-----~~~-------~v-~~ 71 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQ-TVGQVP-KEI-----ADM-------EI-KP 71 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCC-SSSCCC-HHH-----HTC-------BC-EE
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccc-cccccc-ccc-----ccc-------eE-Ee
Confidence 58999999 7999999999988999999999965421111121111000 000011 000 001 11 12
Q ss_pred cCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCC---CCCCeEEeecCccCCCC--C--------Cce
Q 029791 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS---KDAPMFVVGVNENEYKP--E--------LNI 148 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps---~d~p~~V~gvN~~~~~~--~--------~~i 148 (188)
-+++. | .++|+||+|+|.+.+++.++.|+++|+|.|.+|++. ++.|+++||||.+.++. . .++
T Consensus 72 ~~~~~--~--~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~i 147 (359)
T 4dpk_A 72 TDPKL--M--DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFI 147 (359)
T ss_dssp CCGGG--C--TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEE
T ss_pred CCHHH--h--cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccE
Confidence 23333 3 289999999999999999999999999654445553 25899999999999853 1 259
Q ss_pred EEcCChhhHhHHHHHHHHHhhcCceEEEEEEEeeccCCCC
Q 029791 149 VSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 149 is~~sCtT~~lap~l~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
||||+|+|||++++|+||+++|||+++.|+|+|++|+.|+
T Consensus 148 IanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~ 187 (359)
T 4dpk_A 148 VTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGY 187 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEECSGGGCS
T ss_pred EECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCC
Confidence 9999999999999999999999999999999999999885
No 40
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=99.93 E-value=3.2e-26 Score=199.46 Aligned_cols=167 Identities=17% Similarity=0.195 Sum_probs=122.0
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEee
Q 029791 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
++||||+| .|.+|+.++|.|.++|.++++.+......-+.+...+.+. .|..+. ... +.+ .+ ++
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~-~~~~~~-~~~-----~~~-------~v-~~ 71 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQ-TVGQVP-KEI-----ADM-------EI-KP 71 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCC-SSSCCC-HHH-----HTC-------BC-EE
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccc-cccccc-ccc-----ccc-------eE-Ee
Confidence 58999999 7999999999988999999999965421111121111000 000011 000 001 11 12
Q ss_pred cCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCC---CCCCeEEeecCccCCCC--C--------Cce
Q 029791 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS---KDAPMFVVGVNENEYKP--E--------LNI 148 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps---~d~p~~V~gvN~~~~~~--~--------~~i 148 (188)
-+++. | .++|+||+|+|.+.+++.++.|+++|+|.|.+|++. ++.|+++||||.+.++. . .++
T Consensus 72 ~~~~~--~--~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~i 147 (359)
T 4dpl_A 72 TDPKL--M--DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFI 147 (359)
T ss_dssp CCGGG--C--TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEE
T ss_pred CCHHH--h--cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccE
Confidence 23333 3 289999999999999999999999999654445553 25899999999999853 1 259
Q ss_pred EEcCChhhHhHHHHHHHHHhhcCceEEEEEEEeeccCCCC
Q 029791 149 VSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIVN 188 (188)
Q Consensus 149 is~~sCtT~~lap~l~~l~~~~gI~~~~~ttiha~t~~q~ 188 (188)
||||+|+|||++++|+||+++|||+++.|+|+|++|+.|+
T Consensus 148 IanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~ 187 (359)
T 4dpl_A 148 VTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGY 187 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEBCGGGGCS
T ss_pred EECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCC
Confidence 9999999999999999999999999999999999999885
No 41
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=99.91 E-value=3.1e-25 Score=194.51 Aligned_cols=168 Identities=23% Similarity=0.306 Sum_probs=119.6
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEecCCCch-hhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEE
Q 029791 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITT-DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 1 m~~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd~~~~~-~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
|+++||||+| .|.+|+.++|.|.++|.++++.+....-+. +.+... | +|. .. ..|..+.+.+.+
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~------~-~~~-~~------~~~p~~~~~~~v 82 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDA------A-SWK-QT------ETLPETEQDIVV 82 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHH------C-CCC-CS------SCCCHHHHTCBC
T ss_pred CCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHh------c-ccc-cc------cccccccccceE
Confidence 7778999999 799999999999999999998885321011 111111 1 111 00 000000011112
Q ss_pred EeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCC-----CCCeEEeecCccCCC----------
Q 029791 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYK---------- 143 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~-----d~p~~V~gvN~~~~~---------- 143 (188)
++-++++ .|. ++|+||+|+|.+.+++.++.++++|++ ||+.+++ |+|++++++|.+.|.
T Consensus 83 -~~~~~~~-~~~--~~Dvvf~alp~~~s~~~~~~~~~~G~~--VIDlSa~fR~~~~vplvv~~vn~~~~~l~E~~r~~~~ 156 (381)
T 3hsk_A 83 -QECKPEG-NFL--ECDVVFSGLDADVAGDIEKSFVEAGLA--VVSNAKNYRREKDVPLVVPIVNPEHIDVVENKVKQAV 156 (381)
T ss_dssp -EESSSCT-TGG--GCSEEEECCCHHHHHHHHHHHHHTTCE--EEECCSTTTTCTTSCEECTTTCGGGGHHHHHHHHHHH
T ss_pred -EeCchhh-hcc--cCCEEEECCChhHHHHHHHHHHhCCCE--EEEcCCcccCCCCCcEEecccCHHHcCCHhhhhhhhc
Confidence 2223331 353 899999999999999999999999994 5666542 479999999999885
Q ss_pred -----CCCceEEcCChhhHhHHHHHHHHHhhcC-ceEEEEEEEeeccCCCC
Q 029791 144 -----PELNIVSNASCTTNCLAPLAKVIHDKFG-IVEGLMTTVHSITGIVN 188 (188)
Q Consensus 144 -----~~~~iis~~sCtT~~lap~l~~l~~~~g-I~~~~~ttiha~t~~q~ 188 (188)
...++|+||+|+|+|++++|+||+++|| |+++.|+|+|++|+.++
T Consensus 157 ~~~~i~~~~iIaNPgC~tt~~~laL~PL~~~~glI~~v~v~t~~gvSGAG~ 207 (381)
T 3hsk_A 157 SKGGKKPGFIICISNCSTAGLVAPLKPLVEKFGPIDALTTTTLQAISGAGF 207 (381)
T ss_dssp HTTCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEEEEEBCCCC---
T ss_pred ccccccCCcEEECCCcHHHHHHHHHHHHHHhcCCceEEEEEEeeccCCCCc
Confidence 2356999999999999999999999999 99999999999999874
No 42
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=99.91 E-value=1.2e-24 Score=189.15 Aligned_cols=159 Identities=12% Similarity=0.067 Sum_probs=123.5
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCC-----CceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCE
Q 029791 1 MGKVKIGING-FGRIGRLVARVILQRD-----DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK 74 (188)
Q Consensus 1 m~~~kvgI~G-~GriGr~~~r~~~~~~-----~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~ 74 (188)
|+|+||+|+| +|++|+.++|.+.+++ .+++++++... +... ++++.|++|. +.. .+.+
T Consensus 7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~-~agk-----~~~~~~~~l~-~~~------~~~~--- 70 (352)
T 2nqt_A 7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAAT-SAGS-----TLGEHHPHLT-PLA------HRVV--- 70 (352)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESS-CTTS-----BGGGTCTTCG-GGT------TCBC---
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCC-cCCC-----chhhhccccc-ccc------eeee---
Confidence 5558999999 9999999999999988 89999998652 2211 2566777765 210 1111
Q ss_pred EEEEEeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCC--C-C--------------CeEEeec
Q 029791 75 PVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK--D-A--------------PMFVVGV 137 (188)
Q Consensus 75 ~i~v~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~--d-~--------------p~~V~gv 137 (188)
.+.+++ .|. ++|+||+|+|.+.+++.++.+ ++|++.|.+|++.. + + |..+|++
T Consensus 71 -----~~~~~~--~~~--~~DvVf~alg~~~s~~~~~~~-~~G~~vIDlSa~~R~~~~~~~~~~y~~~h~~~~vyglPEv 140 (352)
T 2nqt_A 71 -----EPTEAA--VLG--GHDAVFLALPHGHSAVLAQQL-SPETLIIDCGADFRLTDAAVWERFYGSSHAGSWPYGLPEL 140 (352)
T ss_dssp -----EECCHH--HHT--TCSEEEECCTTSCCHHHHHHS-CTTSEEEECSSTTTCSCHHHHHHHHSSCCCCCCCBSCTTS
T ss_pred -----ccCCHH--Hhc--CCCEEEECCCCcchHHHHHHH-hCCCEEEEECCCccCCcchhhhhhccccCCCCeeEEeccc
Confidence 112222 254 899999999999999999999 99985444455532 2 2 7777777
Q ss_pred --CccCCCCCCceEEcCChhhHhHHHHHHHHHhhcCce-EEEEEEEeeccCC
Q 029791 138 --NENEYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV-EGLMTTVHSITGI 186 (188)
Q Consensus 138 --N~~~~~~~~~iis~~sCtT~~lap~l~~l~~~~gI~-~~~~ttiha~t~~ 186 (188)
|.+.+. ..++|+||+|+|+|+++.|+||+++++|+ ++.|+|+|++|+.
T Consensus 141 ~~n~~~i~-~~~iIanPgC~tt~~~lal~PL~~~~~i~~~i~v~t~~g~SGa 191 (352)
T 2nqt_A 141 PGARDQLR-GTRRIAVPGCYPTAALLALFPALAADLIEPAVTVVAVSGTSGA 191 (352)
T ss_dssp TTHHHHHT-TCSEEECCCHHHHHHHHHHHHHHHTTCSCSEEEEEEEECGGGG
T ss_pred ccCHHHHh-cCCEEEcCCHHHHHHHHHHHHHHHcCCCcceEEEEEEeccccC
Confidence 999887 45899999999999999999999999999 9999999999987
No 43
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=99.88 E-value=1.5e-23 Score=181.33 Aligned_cols=158 Identities=16% Similarity=0.220 Sum_probs=114.7
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEecCCC--ch-hhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEE
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDPFI--TT-DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd~~~--~~-~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
+||+|+| .|.+|+.+++.+.++|+++++++..... +. +.+ ...|..|. +.. .+ .+
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~------~~~~p~~~-~~~------~~-------~v- 63 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLI------SDLHPQLK-GIV------EL-------PL- 63 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBH------HHHCGGGT-TTC------CC-------BE-
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCch------HHhCcccc-Ccc------ce-------eE-
Confidence 7999999 7999999999999989999999865320 00 111 11121122 100 11 12
Q ss_pred eec-CCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCC----C--CC---------------eEEeec
Q 029791 80 GVR-NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK----D--AP---------------MFVVGV 137 (188)
Q Consensus 80 ~~~-~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~----d--~p---------------~~V~gv 137 (188)
++- +++++. .++|+||+|+|.+.+++.++.|+++|+| ||+.+++ | +| .+|||+
T Consensus 64 ~~~~~~~~~~---~~~Dvvf~a~p~~~s~~~~~~~~~~g~~--vIDlSa~fR~~d~~v~~~wy~~~~~~p~l~~~~vygl 138 (337)
T 3dr3_A 64 QPMSDISEFS---PGVDVVFLATAHEVSHDLAPQFLEAGCV--VFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGL 138 (337)
T ss_dssp EEESSGGGTC---TTCSEEEECSCHHHHHHHHHHHHHTTCE--EEECSSTTSSSCHHHHHHHTSSCCSCHHHHHHCEECC
T ss_pred eccCCHHHHh---cCCCEEEECCChHHHHHHHHHHHHCCCE--EEEcCCccccCCcccchhhccccccChhhhcceEEEc
Confidence 111 333331 2799999999999999999999999995 4555432 2 21 345555
Q ss_pred ---CccCCCCCCceEEcCChhhHhHHHHHHHHHh--hcCceEE-EEEEEeeccCCCC
Q 029791 138 ---NENEYKPELNIVSNASCTTNCLAPLAKVIHD--KFGIVEG-LMTTVHSITGIVN 188 (188)
Q Consensus 138 ---N~~~~~~~~~iis~~sCtT~~lap~l~~l~~--~~gI~~~-~~ttiha~t~~q~ 188 (188)
|.+.+.. .++||||+|+|||++++|+||++ .|+++++ .|+|+|++|+.++
T Consensus 139 PEvn~~~i~~-~~iIanPgC~tt~~~l~L~PL~~~g~~~~~~i~~v~t~~g~SGaG~ 194 (337)
T 3dr3_A 139 AEWCGNKLKE-ANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAGR 194 (337)
T ss_dssp TTTCCHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCTTSCCEEEEEECGGGGCS
T ss_pred cccCHHHhCC-CCEEecCChHHHHHHHHHHHHHHcCccCCCceEEEEEeeccccCCc
Confidence 9998864 68999999999999999999999 6999999 9999999999863
No 44
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=99.82 E-value=7.1e-21 Score=165.22 Aligned_cols=155 Identities=14% Similarity=0.159 Sum_probs=119.1
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEee
Q 029791 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
|+||||+| +|.+|+.++|.|.++|.++++.++... +... +|+++|..|. . .+ .+ ++
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~-~aG~-----~~~~~~p~~~-~--------~l-------~~-~~ 69 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRT-YAGK-----KLEEIFPSTL-E--------NS-------IL-SE 69 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECST-TTTS-----BHHHHCGGGC-C--------CC-------BC-BC
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcc-cccC-----ChHHhChhhc-c--------Cc-------eE-Ee
Confidence 58999999 899999999999999999999998642 1111 1333343321 0 12 11 11
Q ss_pred cCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCC---C--C------------------CeEEeecC
Q 029791 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK---D--A------------------PMFVVGVN 138 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~---d--~------------------p~~V~gvN 138 (188)
.+++++ | .++|+||+|+|...+++.++.+ +|+ +||+.+++ + + |..+|++|
T Consensus 70 ~~~~~~-~--~~~Dvvf~alp~~~s~~~~~~~--~g~--~VIDlSsdfRl~~~~~y~~~y~~~h~~p~~~~~~yglPE~n 142 (351)
T 1vkn_A 70 FDPEKV-S--KNCDVLFTALPAGASYDLVREL--KGV--KIIDLGADFRFDDPGVYREWYGKELSGYENIKRVYGLPELH 142 (351)
T ss_dssp CCHHHH-H--HHCSEEEECCSTTHHHHHHTTC--CSC--EEEESSSTTTCSSHHHHHHHHCCCCTTGGGCCEEECCHHHH
T ss_pred CCHHHh-h--cCCCEEEECCCcHHHHHHHHHh--CCC--EEEECChhhhCCchhhhhhhcCCCCCchhhcCCceECCccC
Confidence 223322 2 3799999999999999998877 788 68999874 2 2 67777889
Q ss_pred ccCCCCCCceEEcCChhhHhHHHHHHHHHhhcCce--EEEEEEEeeccCCCC
Q 029791 139 ENEYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITGIVN 188 (188)
Q Consensus 139 ~~~~~~~~~iis~~sCtT~~lap~l~~l~~~~gI~--~~~~ttiha~t~~q~ 188 (188)
.+.+.. .++|+||+|+|+++++.|+||+++++|+ ++.++|+|++|+..+
T Consensus 143 ~e~i~~-a~iIANPgC~~t~~~laL~PL~~~~~i~~~~iiv~t~sgvSGAG~ 193 (351)
T 1vkn_A 143 REEIKN-AQVVGNPGCYPTSVILALAPALKHNLVDPETILVDAKSGVSGAGR 193 (351)
T ss_dssp HHHHTT-CSEEECCCHHHHHHHHHHHHHHHTTCSCCSEEEEEEEEEGGGGCS
T ss_pred HHHhcc-CCEEeCCChHHHHHHHHHHHHHHcCCCCCCEEEEEEEeeccccCc
Confidence 998874 5899999999999999999999999999 999999999998753
No 45
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=98.86 E-value=1.2e-08 Score=86.87 Aligned_cols=156 Identities=18% Similarity=0.216 Sum_probs=96.6
Q ss_pred CC-ccEEEEEccChHHHHHHHHHHc-CCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEE
Q 029791 1 MG-KVKIGINGFGRIGRLVARVILQ-RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 1 m~-~~kvgI~G~GriGr~~~r~~~~-~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
|+ ++||||+|+|.+|+.+++.+.. .++++++++.|...+..-....-+ +|. .. . ..+ + + .+
T Consensus 1 M~~~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~----~g~----~~-~-~~~-~--e----~l 63 (312)
T 1nvm_B 1 MNQKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQR----MGV----TT-T-YAG-V--E----GL 63 (312)
T ss_dssp CCSCEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHH----TTC----CE-E-SSH-H--H----HH
T ss_pred CCCCCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHH----cCC----Cc-c-cCC-H--H----HH
Confidence 53 6899999999999999999866 788999999998422201111111 110 00 0 000 0 0 00
Q ss_pred EeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhC--CCcEEEEeCCCCCCCeEEeecCccCCCC--CCceEEcCCh
Q 029791 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKG--GAKKVIISAPSKDAPMFVVGVNENEYKP--ELNIVSNASC 154 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~--Gakkviis~ps~d~p~~V~gvN~~~~~~--~~~iis~~sC 154 (188)
.++.+| .++|+|++|||.....+.+...+++ |.. |+.-.|..-.|..++.+|.+.... ...+++++.|
T Consensus 64 -----l~~~~~--~~iDvV~~atp~~~h~~~a~~al~a~~Gk~-Vi~ekp~~~g~~~~p~v~~~~~~~~~~~~lva~~g~ 135 (312)
T 1nvm_B 64 -----IKLPEF--ADIDFVFDATSASAHVQNEALLRQAKPGIR-LIDLTPAAIGPYCVPVVNLEEHLGKLNVNMVTCGGQ 135 (312)
T ss_dssp -----HHSGGG--GGEEEEEECSCHHHHHHHHHHHHHHCTTCE-EEECSTTCSSCBCCHHHHTTTTTTCSEEECCCHHHH
T ss_pred -----HhccCC--CCCcEEEECCChHHHHHHHHHHHHhCCCCE-EEEcCcccccccccCccCHHHHHhccCCcEEEeCCc
Confidence 011112 2799999999998888999999988 873 333334222466777888776532 1246655555
Q ss_pred hhHhHHHHHHHHHhhcCceEE-EEEEEeecc
Q 029791 155 TTNCLAPLAKVIHDKFGIVEG-LMTTVHSIT 184 (188)
Q Consensus 155 tT~~lap~l~~l~~~~gI~~~-~~ttiha~t 184 (188)
+..|++..+.+.+..... .+.++.+.+
T Consensus 136 ---~~ipl~~a~~~~~~~~~~~iv~~i~sgs 163 (312)
T 1nvm_B 136 ---ATIPMVAAVSRVAKVHYAEIVASISSKS 163 (312)
T ss_dssp ---HHHHHHHHHHTTSCEEEEEEEEEEEGGG
T ss_pred ---ccchHHHHhhhhccchhHhHhhhhhccc
Confidence 456788888888776543 456665544
No 46
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.56 E-value=1.2e-07 Score=80.54 Aligned_cols=91 Identities=20% Similarity=0.270 Sum_probs=66.9
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEe
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
|+++||||+|+|++|+.+++.+.+.++++++++.|+..+. .+ + . | +.++
T Consensus 1 M~~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~-~~---------------~-----------~-g--v~~~- 49 (320)
T 1f06_A 1 MTNIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL-DT---------------K-----------T-P--VFDV- 49 (320)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC-SS---------------S-----------S-C--EEEG-
T ss_pred CCCCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH-hh---------------c-----------C-C--Ccee-
Confidence 7789999999999999999999888899999999973111 11 0 0 1 1111
Q ss_pred ecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCC
Q 029791 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps 127 (188)
.+.+++. .++|+|++||+.....+.+...+++|. .|+++.|.
T Consensus 50 -~d~~~ll---~~~DvViiatp~~~h~~~~~~al~aG~-~Vv~ekp~ 91 (320)
T 1f06_A 50 -ADVDKHA---DDVDVLFLCMGSATDIPEQAPKFAQFA-CTVDTYDN 91 (320)
T ss_dssp -GGGGGTT---TTCSEEEECSCTTTHHHHHHHHHTTTS-EEECCCCC
T ss_pred -CCHHHHh---cCCCEEEEcCCcHHHHHHHHHHHHCCC-EEEECCCC
Confidence 2333332 378999999999888888889999987 46676663
No 47
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.45 E-value=2.3e-07 Score=78.24 Aligned_cols=91 Identities=20% Similarity=0.254 Sum_probs=62.3
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEe
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
|+++||||+|+|+||+.+++.+...++++++++.|+ +++.... +|- . + . .
T Consensus 7 M~~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~--~~~~~~~-------~g~----~----------~-----~--~ 56 (304)
T 3bio_A 7 DKKIRAAIVGYGNIGRYALQALREAPDFEIAGIVRR--NPAEVPF-------ELQ----P----------F-----R--V 56 (304)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------------CCT----T----------S-----C--E
T ss_pred CCCCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcC--CHHHHHH-------cCC----C----------c-----C--C
Confidence 446899999999999999999988889999999997 3332210 110 0 0 0 0
Q ss_pred ecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
..+..+. .++|+|+.||+.....+.+...+++|. .|+...|
T Consensus 57 ~~~l~~~----~~~DvViiatp~~~h~~~~~~al~aG~-~Vi~ekP 97 (304)
T 3bio_A 57 VSDIEQL----ESVDVALVCSPSREVERTALEILKKGI-CTADSFD 97 (304)
T ss_dssp ESSGGGS----SSCCEEEECSCHHHHHHHHHHHHTTTC-EEEECCC
T ss_pred HHHHHhC----CCCCEEEECCCchhhHHHHHHHHHcCC-eEEECCC
Confidence 0122222 278999999999999999999999987 3555444
No 48
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.31 E-value=1.9e-06 Score=73.93 Aligned_cols=95 Identities=21% Similarity=0.260 Sum_probs=66.9
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEe
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
|+++||||+|+|.+|+.+++++...+++++++|.|+ +.+.....-+|+- . .+
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~a~~~g~-----~----~~----------------- 54 (359)
T 3e18_A 3 LKKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDI--LAEKREAAAQKGL-----K----IY----------------- 54 (359)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS--SHHHHHHHHTTTC-----C----BC-----------------
T ss_pred CCcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcC--CHHHHHHHHhcCC-----c----ee-----------------
Confidence 346899999999999999999988889999999998 4444322111111 0 00
Q ss_pred ecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+++++ ..+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 55 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-hVl~EKP 97 (359)
T 3e18_A 55 -ESYEAV-LADEKVDAVLIATPNDSHKELAISALEAGK-HVVCEKP 97 (359)
T ss_dssp -SCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred -CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-CEEeeCC
Confidence 111111 111378999999999999999999999995 5777666
No 49
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=98.31 E-value=1.5e-06 Score=74.49 Aligned_cols=94 Identities=20% Similarity=0.362 Sum_probs=66.2
Q ss_pred CCccEEEEEccChHHHH-HHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEE
Q 029791 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~-~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|+++||||+|+|.+|+. +++++...+++++++|.|+ +.+..+. +| . + ... +
T Consensus 3 m~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~--~~-------~-~-~~~-------~-------- 54 (358)
T 3gdo_A 3 LDTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTS--RTEEVKR--DF-------P-D-AEV-------V-------- 54 (358)
T ss_dssp TTCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECS--CHHHHHH--HC-------T-T-SEE-------E--------
T ss_pred CCcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcC--CHHHHHh--hC-------C-C-Cce-------E--------
Confidence 34689999999999996 7888877889999999998 4444221 11 1 0 000 0
Q ss_pred eecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+.+++ ..+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 55 --~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 97 (358)
T 3gdo_A 55 --HELEEI-TNDPAIELVIVTTPSGLHYEHTMACIQAGK-HVVMEKP 97 (358)
T ss_dssp --SSTHHH-HTCTTCCEEEECSCTTTHHHHHHHHHHTTC-EEEEESS
T ss_pred --CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHcCC-eEEEecC
Confidence 122222 112378999999999999999999999995 5777666
No 50
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.27 E-value=1.8e-06 Score=73.94 Aligned_cols=98 Identities=24% Similarity=0.252 Sum_probs=66.8
Q ss_pred CCccEEEEEccChHHHHHHHHHH-cCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEE
Q 029791 1 MGKVKIGINGFGRIGRLVARVIL-QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~-~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|+++||||+|+|.||+.+++++. ..+++++++|.|+. .+....+.+ .+|. ... .+
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~--~~~~~~~a~---~~g~----~~~---------------~~ 76 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIV--AGRAQAALD---KYAI----EAK---------------DY 76 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSS--TTHHHHHHH---HHTC----CCE---------------EE
T ss_pred CCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCC--HHHHHHHHH---HhCC----CCe---------------ee
Confidence 66789999999999999999998 67899999999984 333222111 0110 000 00
Q ss_pred eecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+.+++ ..+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 77 --~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP 119 (357)
T 3ec7_A 77 --NDYHDL-INDKDVEVVIITASNEAHADVAVAALNANK-YVFCEKP 119 (357)
T ss_dssp --SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred --CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-CEEeecC
Confidence 111111 111268999999999999999999999994 5777666
No 51
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.24 E-value=2.8e-06 Score=72.37 Aligned_cols=94 Identities=18% Similarity=0.236 Sum_probs=66.3
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhh-cccccCcCCCcceEEeCCCeeEECCEEEEEEe
Q 029791 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFK-YDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 2 ~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~-yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
+++||||+|+|.+|+.+++++...++++++++.|+ +.+....+.+ |.- . . +
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~--~~~~~~~~~~~~g~-----~---~-~----------------- 55 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSR--TEDKREKFGKRYNC-----A---G-D----------------- 55 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECS--SHHHHHHHHHHHTC-----C---C-C-----------------
T ss_pred CcceEEEEccCHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHHHHcCC-----C---C-c-----------------
Confidence 45899999999999999999988889999999998 4443322211 110 0 0 0
Q ss_pred ecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+++++ ..+.++|+|+-||+.....+.+...+++|. .|++.-|
T Consensus 56 -~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~EKP 98 (354)
T 3db2_A 56 -ATMEAL-LAREDVEMVIITVPNDKHAEVIEQCARSGK-HIYVEKP 98 (354)
T ss_dssp -SSHHHH-HHCSSCCEEEECSCTTSHHHHHHHHHHTTC-EEEEESS
T ss_pred -CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcCC-EEEEccC
Confidence 111111 011368999999999999999999999995 4777666
No 52
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.24 E-value=2.4e-06 Score=72.11 Aligned_cols=93 Identities=29% Similarity=0.360 Sum_probs=66.0
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeec
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
++||||+|+|.+|+.+++.+...++++++++.|+ +.+....+.+. +| .. + .
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~~~---~~----~~--~------------------~ 53 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADARLVAVADA--FPAAAEAIAGA---YG----CE--V------------------R 53 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHHHH---TT----CE--E------------------C
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECC--CHHHHHHHHHH---hC----CC--c------------------C
Confidence 4899999999999999999988889999999998 44433222210 00 00 1 1
Q ss_pred CCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
+++++ ..+.++|+|+-||+.....+.+...+++|. .|++.-|
T Consensus 54 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~v~~EKP 95 (331)
T 4hkt_A 54 TIDAI-EAAADIDAVVICTPTDTHADLIERFARAGK-AIFCEKP 95 (331)
T ss_dssp CHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred CHHHH-hcCCCCCEEEEeCCchhHHHHHHHHHHcCC-cEEEecC
Confidence 11111 111268999999999999999999999994 5777666
No 53
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=98.24 E-value=1.7e-06 Score=72.40 Aligned_cols=97 Identities=26% Similarity=0.305 Sum_probs=62.6
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEE
Q 029791 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|.|+||+|+| +|++||.+++.+.+.++++++++.|...+. . .|+.. +++. | +.- | +.+
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~-~----------~G~d~-gel~---g--~~~-g--v~v- 63 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSP-Q----------LGQDA-GAFL---G--KQT-G--VAL- 63 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCT-T----------TTSBT-TTTT---T--CCC-S--CBC-
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcc-c----------ccccH-HHHh---C--CCC-C--cee-
Confidence 6679999999 899999999999999999999999873211 0 11111 1110 0 000 1 111
Q ss_pred eecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEE
Q 029791 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkvii 123 (188)
..|.+++. .++|+|||+|......+.+...++.|.+ +|+
T Consensus 64 -~~dl~~ll---~~~DVVIDfT~p~a~~~~~~~al~~G~~-vVi 102 (272)
T 4f3y_A 64 -TDDIERVC---AEADYLIDFTLPEGTLVHLDAALRHDVK-LVI 102 (272)
T ss_dssp -BCCHHHHH---HHCSEEEECSCHHHHHHHHHHHHHHTCE-EEE
T ss_pred -cCCHHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEE
Confidence 12222221 1579999999887777888888888885 555
No 54
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.23 E-value=2e-06 Score=72.82 Aligned_cols=97 Identities=15% Similarity=0.141 Sum_probs=66.4
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEe
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
|+++||||+|+|.+|+.+++++.+.+++++++|.|+. .+....+.+ .+|. ...+
T Consensus 3 m~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~--~~~~~~~~~---~~~~----~~~~----------------- 56 (330)
T 3e9m_A 3 LDKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRR--LENAQKMAK---ELAI----PVAY----------------- 56 (330)
T ss_dssp CCCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSS--SHHHHHHHH---HTTC----CCCB-----------------
T ss_pred CCeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCC--HHHHHHHHH---HcCC----Ccee-----------------
Confidence 3468999999999999999999988899999999984 333222211 0110 0000
Q ss_pred ecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+.+++ ..+.++|+|+-||+.....+.+...+++|. .|++.-|
T Consensus 57 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~EKP 99 (330)
T 3e9m_A 57 -GSYEEL-CKDETIDIIYIPTYNQGHYSAAKLALSQGK-PVLLEKP 99 (330)
T ss_dssp -SSHHHH-HHCTTCSEEEECCCGGGHHHHHHHHHHTTC-CEEECSS
T ss_pred -CCHHHH-hcCCCCCEEEEcCCCHHHHHHHHHHHHCCC-eEEEeCC
Confidence 111111 011268999999999999999999999995 4777666
No 55
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=98.22 E-value=2.3e-06 Score=72.94 Aligned_cols=97 Identities=21% Similarity=0.197 Sum_probs=63.5
Q ss_pred CCccEEEEEccChHHHHHHHHHHc-------CCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECC
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQ-------RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGE 73 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~-------~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g 73 (188)
|+++||||+|+|+||+.+++++.. .++++|+||+|+. .+....+.+ .|| ....+
T Consensus 23 MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~--~~~a~~~a~---~~g----~~~~y---------- 83 (393)
T 4fb5_A 23 MKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEAN--AGLAEARAG---EFG----FEKAT---------- 83 (393)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC----TTHHHHHH---HHT----CSEEE----------
T ss_pred CCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCC--HHHHHHHHH---HhC----CCeec----------
Confidence 667999999999999998887642 3678999999984 333222211 011 00001
Q ss_pred EEEEEEeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 74 KPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 74 ~~i~v~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.|.+++ ..+.++|.|+=||+...-.+.+...+++|.. |++--|
T Consensus 84 --------~d~~el-l~~~~iDaV~IatP~~~H~~~a~~al~aGkh-Vl~EKP 126 (393)
T 4fb5_A 84 --------ADWRAL-IADPEVDVVSVTTPNQFHAEMAIAALEAGKH-VWCEKP 126 (393)
T ss_dssp --------SCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTCE-EEECSC
T ss_pred --------CCHHHH-hcCCCCcEEEECCChHHHHHHHHHHHhcCCe-EEEccC
Confidence 111111 1123689999999999999999999999973 666556
No 56
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.22 E-value=1.9e-06 Score=70.94 Aligned_cols=36 Identities=31% Similarity=0.494 Sum_probs=31.8
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEecCC
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~ 37 (188)
|+|+||+|+|+|++||.+++.+.+.++ +++++.|..
T Consensus 1 M~MmkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~~ 36 (243)
T 3qy9_A 1 MASMKILLIGYGAMNQRVARLAEEKGH-EIVGVIENT 36 (243)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEECSS
T ss_pred CCceEEEEECcCHHHHHHHHHHHhCCC-EEEEEEecC
Confidence 666899999999999999999999998 999999974
No 57
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=98.21 E-value=2.4e-06 Score=73.20 Aligned_cols=93 Identities=20% Similarity=0.345 Sum_probs=65.6
Q ss_pred CccEEEEEccChHHHH-HHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEe
Q 029791 2 GKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 2 ~~~kvgI~G~GriGr~-~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
+++||||+|+|++|+. +++.+...+++++++|.|+. ++..+. + |. +. . ++
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~--~~~~~~--~-------~~-~~-~---------------~~- 54 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERS--KELSKE--R-------YP-QA-S---------------IV- 54 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSS--CCGGGT--T-------CT-TS-E---------------EE-
T ss_pred CceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCC--HHHHHH--h-------CC-CC-c---------------eE-
Confidence 4689999999999996 88888888899999999984 333210 1 11 00 0 10
Q ss_pred ecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+.+++. .+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 55 -~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 97 (362)
T 3fhl_A 55 -RSFKELT-EDPEIDLIVVNTPDNTHYEYAGMALEAGK-NVVVEKP 97 (362)
T ss_dssp -SCSHHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred -CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCCC-eEEEecC
Confidence 1222221 12368999999999999999999999995 5777666
No 58
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.21 E-value=2.5e-06 Score=72.48 Aligned_cols=96 Identities=27% Similarity=0.396 Sum_probs=66.1
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEe
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
|| +||||+|+|.+|+.+++++...+++++++|.|+ +.+....+.+ .+| ....+
T Consensus 1 M~-~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~~---~~~----~~~~~----------------- 53 (344)
T 3ezy_A 1 MS-LRIGVIGLGRIGTIHAENLKMIDDAILYAISDV--REDRLREMKE---KLG----VEKAY----------------- 53 (344)
T ss_dssp -C-EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECS--CHHHHHHHHH---HHT----CSEEE-----------------
T ss_pred Ce-eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHHH---HhC----CCcee-----------------
Confidence 54 899999999999999999988889999999998 4443322221 011 00000
Q ss_pred ecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+.+++ ..+.++|+|+-||+.....+.+...+++|. .|++.-|
T Consensus 54 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~v~~EKP 96 (344)
T 3ezy_A 54 -KDPHEL-IEDPNVDAVLVCSSTNTHSELVIACAKAKK-HVFCEKP 96 (344)
T ss_dssp -SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESC
T ss_pred -CCHHHH-hcCCCCCEEEEcCCCcchHHHHHHHHhcCC-eEEEECC
Confidence 111111 111278999999999988899999999995 5777766
No 59
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=98.20 E-value=3.3e-06 Score=71.99 Aligned_cols=94 Identities=23% Similarity=0.391 Sum_probs=66.2
Q ss_pred CC-ccEEEEEccChHHHH-HHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEE
Q 029791 1 MG-KVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 1 m~-~~kvgI~G~GriGr~-~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
|+ ++||||+|+|++|+. +++++...+++++++|.|+ +++... -+ +. +...+
T Consensus 4 M~~~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~--~~~~~~--~~-------~~-~~~~~--------------- 56 (352)
T 3kux_A 4 MADKIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSS--DASKVH--AD-------WP-AIPVV--------------- 56 (352)
T ss_dssp TTCCEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS--CHHHHH--TT-------CS-SCCEE---------------
T ss_pred ccCCceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECC--CHHHHH--hh-------CC-CCceE---------------
Confidence 53 589999999999996 8888888889999999998 444432 01 11 10001
Q ss_pred EeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+.+++. .+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 57 ---~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hV~~EKP 99 (352)
T 3kux_A 57 ---SDPQMLF-NDPSIDLIVIPTPNDTHFPLAQSALAAGK-HVVVDKP 99 (352)
T ss_dssp ---SCHHHHH-HCSSCCEEEECSCTTTHHHHHHHHHHTTC-EEEECSS
T ss_pred ---CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCCC-cEEEECC
Confidence 1122211 12368999999999999999999999994 5777666
No 60
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=98.19 E-value=3.9e-06 Score=71.83 Aligned_cols=37 Identities=30% Similarity=0.433 Sum_probs=32.5
Q ss_pred CCccEEEEEccChHHHHHHHHHHcC------CCceEEEEecCC
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQR------DDVELVAVNDPF 37 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~------~~~~ivaInd~~ 37 (188)
|+++||||+|+|.||+.+++.+.+. +++++++|.|..
T Consensus 2 Mk~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~ 44 (325)
T 3ing_A 2 MKEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSR 44 (325)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSS
T ss_pred CceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecC
Confidence 7789999999999999999999764 579999999974
No 61
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.18 E-value=2.3e-06 Score=72.28 Aligned_cols=97 Identities=18% Similarity=0.211 Sum_probs=64.9
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEe
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
|+++||||+|+|+||+.+++++...+++++++|.|+. .+....+.+ .+ + + . ..+
T Consensus 3 m~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~--~~~~~~~a~---~~------------~--~--~----~~~- 56 (329)
T 3evn_A 3 LSKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRT--LESAQAFAN---KY------------H--L--P----KAY- 56 (329)
T ss_dssp --CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSC--SSTTCC------CC------------C--C--S----CEE-
T ss_pred CCceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCC--HHHHHHHHH---Hc------------C--C--C----ccc-
Confidence 3468999999999999999998877889999999973 322211100 00 0 0 0 000
Q ss_pred ecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+.+++. .+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 57 -~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP 99 (329)
T 3evn_A 57 -DKLEDML-ADESIDVIYVATINQDHYKVAKAALLAGK-HVLVEKP 99 (329)
T ss_dssp -SCHHHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred -CCHHHHh-cCCCCCEEEECCCcHHHHHHHHHHHHCCC-eEEEccC
Confidence 1222221 12378999999999999999999999995 4777666
No 62
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=98.17 E-value=1.2e-06 Score=74.63 Aligned_cols=96 Identities=15% Similarity=0.151 Sum_probs=66.6
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCC-------ceEEEEecCCCchhhhhhhhh-cccccCcCCCcceEEeCCCeeEEC
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDD-------VELVAVNDPFITTDYMTYMFK-YDSVHGQWKHHELKVKDDKTLLFG 72 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~-------~~ivaInd~~~~~~~~~~l~~-yDS~~g~~~~~~v~~~~~~~l~i~ 72 (188)
|+++||||+|+|.||+.+++++...|+ .+|++|+|+ +++....+.+ |.- ...+
T Consensus 4 M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~--~~~~a~~~a~~~g~--------~~~~--------- 64 (390)
T 4h3v_A 4 MTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGR--DAEAVRAAAGKLGW--------STTE--------- 64 (390)
T ss_dssp CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECS--SHHHHHHHHHHHTC--------SEEE---------
T ss_pred CCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcC--CHHHHHHHHHHcCC--------Cccc---------
Confidence 778999999999999999998875543 499999998 4444322221 110 0000
Q ss_pred CEEEEEEeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 73 EKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 73 g~~i~v~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.|.+++ ..+.++|.|+=||+.....+.+...+++|. -|++--|
T Consensus 65 ---------~d~~~l-l~~~~iDaV~I~tP~~~H~~~~~~al~aGk-hVl~EKP 107 (390)
T 4h3v_A 65 ---------TDWRTL-LERDDVQLVDVCTPGDSHAEIAIAALEAGK-HVLCEKP 107 (390)
T ss_dssp ---------SCHHHH-TTCTTCSEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred ---------CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcCC-CceeecC
Confidence 112221 112378999999999999999999999995 5777666
No 63
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=98.13 E-value=5.9e-06 Score=70.96 Aligned_cols=92 Identities=20% Similarity=0.300 Sum_probs=64.7
Q ss_pred ccEEEEEccChHHHH-HHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEee
Q 029791 3 KVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~kvgI~G~GriGr~-~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
++||||+|+|++|+. +++.+...+++++++|.|+ +.+.... +| . +...+
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~--~~-------~-~~~~~------------------ 56 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASR--DEEKVKR--DL-------P-DVTVI------------------ 56 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS--CHHHHHH--HC-------T-TSEEE------------------
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC--CHHHHHh--hC-------C-CCcEE------------------
Confidence 589999999999996 8888888889999999998 4444321 11 1 11011
Q ss_pred cCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+.+++ ..+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 57 ~~~~~l-l~~~~~D~V~i~tp~~~H~~~~~~al~aGk-~Vl~EKP 99 (364)
T 3e82_A 57 ASPEAA-VQHPDVDLVVIASPNATHAPLARLALNAGK-HVVVDKP 99 (364)
T ss_dssp SCHHHH-HTCTTCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCCC-cEEEeCC
Confidence 111111 112378999999999999999999999995 4666555
No 64
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.13 E-value=5.6e-06 Score=70.27 Aligned_cols=97 Identities=20% Similarity=0.262 Sum_probs=66.3
Q ss_pred CccEEEEEccChHHHHHHHHHH-cCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEe
Q 029791 2 GKVKIGINGFGRIGRLVARVIL-QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 2 ~~~kvgI~G~GriGr~~~r~~~-~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
|++||||+|+|.+|+.+++++. ..++++++++.|+ +.+....+.+ .+|. ... .+
T Consensus 1 M~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~--~~~~~~~~~~---~~g~----~~~---------------~~- 55 (344)
T 3mz0_A 1 MSLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDV--NQEAAQKVVE---QYQL----NAT---------------VY- 55 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECS--SHHHHHHHHH---HTTC----CCE---------------EE-
T ss_pred CeEEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHHH---HhCC----CCe---------------ee-
Confidence 2489999999999999999998 6789999999998 4443322211 0110 000 00
Q ss_pred ecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+++++ ..+.++|+|+-||+.....+.+...+++|. .|++.-|
T Consensus 56 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~vl~EKP 98 (344)
T 3mz0_A 56 -PNDDSL-LADENVDAVLVTSWGPAHESSVLKAIKAQK-YVFCEKP 98 (344)
T ss_dssp -SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred -CCHHHH-hcCCCCCEEEECCCchhHHHHHHHHHHCCC-cEEEcCC
Confidence 111111 011268999999999999999999999995 5777666
No 65
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=98.11 E-value=8.4e-06 Score=71.83 Aligned_cols=105 Identities=25% Similarity=0.331 Sum_probs=67.8
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhh-cccccCcCCCcceEEeCCCeeEECCEEEEEE
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFK-YDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~-yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|+++||||+|+|.+|+.+++++...+++++++|.|+ +.+....+.+ +.. +|. + . .. .+.+
T Consensus 18 ~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~--~~~~~~~~a~~~~~-~g~-~-~-~~-------~~~~------ 78 (444)
T 2ixa_A 18 PKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADP--DPYMVGRAQEILKK-NGK-K-P-AK-------VFGN------ 78 (444)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS--CHHHHHHHHHHHHH-TTC-C-C-CE-------EECS------
T ss_pred CCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHHHHHHHHHh-cCC-C-C-Cc-------eecc------
Confidence 456899999999999999999988889999999998 4443322211 100 110 0 0 00 0100
Q ss_pred eecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+.+.+++- .+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 79 ~~~~~~~ll-~~~~vD~V~i~tp~~~h~~~~~~al~aGk-hV~~EKP 123 (444)
T 2ixa_A 79 GNDDYKNML-KDKNIDAVFVSSPWEWHHEHGVAAMKAGK-IVGMEVS 123 (444)
T ss_dssp STTTHHHHT-TCTTCCEEEECCCGGGHHHHHHHHHHTTC-EEEECCC
T ss_pred CCCCHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEeCC
Confidence 001222221 12368999999999998999999999996 4666555
No 66
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.11 E-value=8.2e-06 Score=69.15 Aligned_cols=96 Identities=25% Similarity=0.416 Sum_probs=66.6
Q ss_pred CC-ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEE
Q 029791 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~-~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|+ ++||||+|+|.+|+.+++++...++++++++.|+ +.+....+.+ .+| .. ++
T Consensus 1 M~~~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~g------~~---------------~~ 54 (344)
T 3euw_A 1 MSLTLRIALFGAGRIGHVHAANIAANPDLELVVIADP--FIEGAQRLAE---ANG------AE---------------AV 54 (344)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHHH---TTT------CE---------------EE
T ss_pred CCCceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHHH---HcC------Cc---------------ee
Confidence 53 5899999999999999999998889999999998 4443322211 011 00 00
Q ss_pred eecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+++++ ..+.++|+|+-||+.....+.+...+++|. .|++.-|
T Consensus 55 --~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~v~~EKP 97 (344)
T 3euw_A 55 --ASPDEV-FARDDIDGIVIGSPTSTHVDLITRAVERGI-PALCEKP 97 (344)
T ss_dssp --SSHHHH-TTCSCCCEEEECSCGGGHHHHHHHHHHTTC-CEEECSC
T ss_pred --CCHHHH-hcCCCCCEEEEeCCchhhHHHHHHHHHcCC-cEEEECC
Confidence 112211 112378999999999999999999999995 4777666
No 67
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=98.11 E-value=5.5e-06 Score=71.08 Aligned_cols=88 Identities=23% Similarity=0.284 Sum_probs=61.4
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCC--------CceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEEC
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRD--------DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFG 72 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~--------~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~ 72 (188)
|+++||||+|+|.||+.+++.+.+.+ ++++++|.|.. ++.. .+ +. .+ .
T Consensus 1 Mk~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~--~~~~---------~~-~~-------~~--~--- 56 (332)
T 2ejw_A 1 MEALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRD--PRKP---------RA-IP-------QE--L--- 56 (332)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSC--TTSC---------CS-SC-------GG--G---
T ss_pred CCeeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECC--HHHh---------hc-cC-------cc--c---
Confidence 66799999999999999999998776 68999999973 2110 00 01 00 0
Q ss_pred CEEEEEEeecCCCCCCcccCCccEEEeecCccc-CHHhHHHHHhCCCcEEEEeC
Q 029791 73 EKPVTVFGVRNPEEIPWAETGAEYVVESTGVFT-DKDKAAAHLKGGAKKVIISA 125 (188)
Q Consensus 73 g~~i~v~~~~~p~~~~w~~~~vdiV~e~tg~~~-~~~~~~~h~~~Gakkviis~ 125 (188)
+ ..|++++- ++|+|++|||... ..+.+...+++|. -|+++
T Consensus 57 -----~--~~d~~~ll----~iDvVve~t~~~~~a~~~~~~AL~aGK--hVVta 97 (332)
T 2ejw_A 57 -----L--RAEPFDLL----EADLVVEAMGGVEAPLRLVLPALEAGI--PLITA 97 (332)
T ss_dssp -----E--ESSCCCCT----TCSEEEECCCCSHHHHHHHHHHHHTTC--CEEEC
T ss_pred -----c--cCCHHHHh----CCCEEEECCCCcHHHHHHHHHHHHcCC--eEEEC
Confidence 1 13455554 7899999999763 4567778899997 34553
No 68
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=98.11 E-value=5.6e-06 Score=70.58 Aligned_cols=96 Identities=21% Similarity=0.333 Sum_probs=65.2
Q ss_pred CccEEEEEccChHHH-HHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEe
Q 029791 2 GKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 2 ~~~kvgI~G~GriGr-~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
|++||||+|+|.+|+ .+++.+...+++++++|.|+. ..+.++. +|+. . + . .++
T Consensus 1 M~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a~--~~~~-----~--------~--~-------~~~- 54 (349)
T 3i23_A 1 MTVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAAA--PFKE-----K--------G--V-------NFT- 54 (349)
T ss_dssp CCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHHH--HHHT-----T--------T--C-------EEE-
T ss_pred CeeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHHH--hhCC-----C--------C--C-------eEE-
Confidence 248999999999998 688888788899999999984 2222221 1110 0 0 0 010
Q ss_pred ecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+.+++. .+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 55 -~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP 97 (349)
T 3i23_A 55 -ADLNELL-TDPEIELITICTPAHTHYDLAKQAILAGK-SVIVEKP 97 (349)
T ss_dssp -SCTHHHH-SCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred -CCHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHcCC-EEEEECC
Confidence 1222221 12368999999999999999999999994 5777666
No 69
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=98.11 E-value=2.9e-06 Score=72.12 Aligned_cols=89 Identities=20% Similarity=0.232 Sum_probs=64.6
Q ss_pred CCccEEEEEccChHHH-HHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEE
Q 029791 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~kvgI~G~GriGr-~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|+++||||+|+|.||+ .+++++...+++++++|.|+. .+. + | -. .+
T Consensus 23 M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~--~~~------~----g----~~-~~---------------- 69 (330)
T 4ew6_A 23 MSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRH--GTV------E----G----VN-SY---------------- 69 (330)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSS--CCC------T----T----SE-EE----------------
T ss_pred CCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCC--hhh------c----C----CC-cc----------------
Confidence 5568999999999999 799999988899999999984 211 0 0 00 01
Q ss_pred eecCCCCCCccc-CCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 80 GVRNPEEIPWAE-TGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~-~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+.+++ ..+ .++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 70 --~~~~~l-l~~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 113 (330)
T 4ew6_A 70 --TTIEAM-LDAEPSIDAVSLCMPPQYRYEAAYKALVAGK-HVFLEKP 113 (330)
T ss_dssp --SSHHHH-HHHCTTCCEEEECSCHHHHHHHHHHHHHTTC-EEEECSS
T ss_pred --CCHHHH-HhCCCCCCEEEEeCCcHHHHHHHHHHHHcCC-cEEEeCC
Confidence 111111 011 268999999999988899999999994 5777666
No 70
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.07 E-value=1e-05 Score=68.42 Aligned_cols=96 Identities=18% Similarity=0.278 Sum_probs=64.6
Q ss_pred CccEEEEEccChHHHHHHHHHH-cCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEe
Q 029791 2 GKVKIGINGFGRIGRLVARVIL-QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 2 ~~~kvgI~G~GriGr~~~r~~~-~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
+++||||+|+|.+|+.+++.+. ..++++++++.|+ +.+....+.+ .+|. . . .+
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~--~~~~~~~~a~---~~g~----~-~-------~~--------- 60 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACAL--DSNQLEWAKN---ELGV----E-T-------TY--------- 60 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECS--CHHHHHHHHH---TTCC----S-E-------EE---------
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecC--CHHHHHHHHH---HhCC----C-c-------cc---------
Confidence 3589999999999999999988 7788999999998 4443322211 0110 0 0 01
Q ss_pred ecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+.+++ ..+.++|+|+.||+.....+.+...+++|. -|++.-|
T Consensus 61 -~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~G~-~v~~eKp 103 (346)
T 3cea_A 61 -TNYKDM-IDTENIDAIFIVAPTPFHPEMTIYAMNAGL-NVFCEKP 103 (346)
T ss_dssp -SCHHHH-HTTSCCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred -CCHHHH-hcCCCCCEEEEeCChHhHHHHHHHHHHCCC-EEEEcCC
Confidence 111111 011268999999999988899999999985 4666545
No 71
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=98.07 E-value=6.6e-06 Score=69.55 Aligned_cols=96 Identities=20% Similarity=0.182 Sum_probs=64.7
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCC--CceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEE
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRD--DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~--~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
|| +||||+|+|.||+.+++++...+ ++++++|.|+ +.+....+.+ .||. ...+
T Consensus 1 M~-~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~--~~~~a~~~a~---~~~~----~~~~--------------- 55 (334)
T 3ohs_X 1 MA-LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAAR--DLSRAKEFAQ---KHDI----PKAY--------------- 55 (334)
T ss_dssp -C-EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECS--SHHHHHHHHH---HHTC----SCEE---------------
T ss_pred Cc-cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcC--CHHHHHHHHH---HcCC----Cccc---------------
Confidence 54 89999999999999999987765 4899999998 4443322211 0110 0001
Q ss_pred EeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+.+++ ..+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 56 ---~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~~Gk-hVl~EKP 98 (334)
T 3ohs_X 56 ---GSYEEL-AKDPNVEVAYVGTQHPQHKAAVMLCLAAGK-AVLCEKP 98 (334)
T ss_dssp ---SSHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred ---CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHhcCC-EEEEECC
Confidence 111111 011368999999999999999999999994 5777666
No 72
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.05 E-value=8.9e-06 Score=69.45 Aligned_cols=96 Identities=11% Similarity=0.125 Sum_probs=66.3
Q ss_pred CCccEEEEEccChHHH-HHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEE
Q 029791 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~kvgI~G~GriGr-~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|+++||||+|+|.+|+ .+++++...+++++++|.|+ +.+....+.+ .+ | + ..+
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~------------g--~-------~~~ 78 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASR--RWDRAKRFTE---RF------------G--G-------EPV 78 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEES--SHHHHHHHHH---HH------------C--S-------EEE
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcC--CHHHHHHHHH---Hc------------C--C-------CCc
Confidence 5568999999999998 78999988889999999998 4443322211 00 0 0 000
Q ss_pred eecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+.+++ ..+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 79 --~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP 121 (350)
T 3rc1_A 79 --EGYPAL-LERDDVDAVYVPLPAVLHAEWIDRALRAGK-HVLAEKP 121 (350)
T ss_dssp --ESHHHH-HTCTTCSEEEECCCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred --CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCCC-cEEEeCC
Confidence 112211 112368999999999999999999999996 4777666
No 73
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=98.04 E-value=8.3e-06 Score=69.89 Aligned_cols=97 Identities=16% Similarity=0.230 Sum_probs=66.4
Q ss_pred CCccEEEEEccChHHHH-HHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEE
Q 029791 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~-~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|+++||||+|+|.+|+. +++++...+++++++|.|+ +++....+.+ .+ . .... +
T Consensus 3 M~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~---~-~~~~--------~-------- 57 (359)
T 3m2t_A 3 LSLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDS--DLERARRVHR---FI---S-DIPV--------L-------- 57 (359)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECS--SHHHHGGGGG---TS---C-SCCE--------E--------
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcC--CHHHHHHHHH---hc---C-CCcc--------c--------
Confidence 34589999999999995 8899988889999999998 4444322211 01 1 0000 1
Q ss_pred eecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+.+++ ..+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 58 --~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 100 (359)
T 3m2t_A 58 --DNVPAM-LNQVPLDAVVMAGPPQLHFEMGLLAMSKGV-NVFVEKP 100 (359)
T ss_dssp --SSHHHH-HHHSCCSEEEECSCHHHHHHHHHHHHHTTC-EEEECSC
T ss_pred --CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEECC
Confidence 112221 112368999999999988899999999996 4777666
No 74
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.03 E-value=8.5e-06 Score=68.37 Aligned_cols=93 Identities=17% Similarity=0.262 Sum_probs=63.0
Q ss_pred CCccEEEEEccChHHHH-HHHHHHcCCCceEEEEecCCCchhhhhhhh-hcccccCcCCCcceEEeCCCeeEECCEEEEE
Q 029791 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMF-KYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~-~~r~~~~~~~~~ivaInd~~~~~~~~~~l~-~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
|+++||||+|+|.+|+. +++.+...++++++++.|+. .+....+. +|.. . +
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~--~~~~~~~~~~~g~--------~-----------------~ 55 (319)
T 1tlt_A 3 LKKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPT--RAKALPICESWRI--------P-----------------Y 55 (319)
T ss_dssp --CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSS--CTTHHHHHHHHTC--------C-----------------B
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCC--HHHHHHHHHHcCC--------C-----------------c
Confidence 33589999999999996 88988887889999999984 32221111 1110 0 0
Q ss_pred EeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
..+++.+ ..++|+|+.||+.....+.+...+++|. .|++.-|
T Consensus 56 --~~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~G~-~v~~eKP 97 (319)
T 1tlt_A 56 --ADSLSSL---AASCDAVFVHSSTASHFDVVSTLLNAGV-HVCVDKP 97 (319)
T ss_dssp --CSSHHHH---HTTCSEEEECSCTTHHHHHHHHHHHTTC-EEEEESS
T ss_pred --cCcHHHh---hcCCCEEEEeCCchhHHHHHHHHHHcCC-eEEEeCC
Confidence 0112222 1368999999999888888888999986 4666555
No 75
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=98.02 E-value=1.1e-05 Score=68.62 Aligned_cols=94 Identities=16% Similarity=0.247 Sum_probs=62.8
Q ss_pred ccEEEEEccChHHHH-HHH-HHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEe
Q 029791 3 KVKIGINGFGRIGRL-VAR-VILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 3 ~~kvgI~G~GriGr~-~~r-~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
++||||+|+|++|+. +++ .+...+++++++|.|+..+.. ...-+| . + . .++
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~--~~~~~~-------~--------~--~-------~~~- 54 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPE--EQAPIY-------S--------H--I-------HFT- 54 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGG--GGSGGG-------T--------T--C-------EEE-
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHH--HHHHhc-------C--------C--C-------ceE-
Confidence 489999999999985 777 446678899999999843221 111111 1 1 0 011
Q ss_pred ecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+++++ ..+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 55 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP 97 (345)
T 3f4l_A 55 -SDLDEV-LNDPDVKLVVVCTHADSHFEYAKRALEAGK-NVLVEKP 97 (345)
T ss_dssp -SCTHHH-HTCTTEEEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred -CCHHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHcCC-cEEEeCC
Confidence 223222 112368999999999999999999999995 5666555
No 76
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=98.00 E-value=1.1e-05 Score=68.80 Aligned_cols=99 Identities=14% Similarity=0.210 Sum_probs=65.5
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEee
Q 029791 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 2 ~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
+++||||+|+|.||+.+++++...+++++++|.|+ +.+....+.+ .+|-.. ... ++
T Consensus 5 ~~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~--~~~~~~~~a~---~~~~~~--~~~---------------~~-- 60 (362)
T 1ydw_A 5 TQIRIGVMGCADIARKVSRAIHLAPNATISGVASR--SLEKAKAFAT---ANNYPE--STK---------------IH-- 60 (362)
T ss_dssp -CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHHH---HTTCCT--TCE---------------EE--
T ss_pred CceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHHH---HhCCCC--CCe---------------ee--
Confidence 36899999999999999999988888999999998 4443322211 011000 000 10
Q ss_pred cCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+.+++ ..+.++|+|+.||+.....+.+...+++|. .|++--|
T Consensus 61 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~V~~EKP 103 (362)
T 1ydw_A 61 GSYESL-LEDPEIDALYVPLPTSLHVEWAIKAAEKGK-HILLEKP 103 (362)
T ss_dssp SSHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHTTTC-EEEECSS
T ss_pred CCHHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHCCC-eEEEecC
Confidence 112111 111268999999999988899999999996 4666555
No 77
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.00 E-value=1.3e-05 Score=66.87 Aligned_cols=94 Identities=17% Similarity=0.267 Sum_probs=65.6
Q ss_pred CCccEEEEEccChHHHH-HHHHHHcCCCceEEEEecCCCchhhhhhhhh-cccccCcCCCcceEEeCCCeeEECCEEEEE
Q 029791 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFK-YDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~-~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~-yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
|+++||||+|+|.+|+. +++++...+++++++|.|+ +.+....+.+ |.- .. +
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~~~~~--------~~-~--------------- 57 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTP--NKVKREKICSDYRI--------MP-F--------------- 57 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECS--CHHHHHHHHHHHTC--------CB-C---------------
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECC--CHHHHHHHHHHcCC--------CC-c---------------
Confidence 55789999999999996 8888888789999999998 4443322211 110 00 0
Q ss_pred EeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCC
Q 029791 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps 127 (188)
.+.+++. + ++|+|+-||+.....+.+...+++|.. |++.-|.
T Consensus 58 ---~~~~~ll--~-~~D~V~i~tp~~~h~~~~~~al~~gk~-vl~EKP~ 99 (308)
T 3uuw_A 58 ---DSIESLA--K-KCDCIFLHSSTETHYEIIKILLNLGVH-VYVDKPL 99 (308)
T ss_dssp ---SCHHHHH--T-TCSEEEECCCGGGHHHHHHHHHHTTCE-EEECSSS
T ss_pred ---CCHHHHH--h-cCCEEEEeCCcHhHHHHHHHHHHCCCc-EEEcCCC
Confidence 1111111 1 689999999999999999999999964 6766563
No 78
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=98.00 E-value=1.1e-05 Score=67.37 Aligned_cols=101 Identities=19% Similarity=0.226 Sum_probs=64.8
Q ss_pred CCccEEEEEcc-ChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEE
Q 029791 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~kvgI~G~-GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|+++||+|+|+ |++|+.+++.+.+.++++++++.|.. .+... -.| -|.+. + . + -.| +.+.
T Consensus 3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~--~~~~~---g~d--~~~~~-g---~--~----~~~--v~~~ 63 (273)
T 1dih_A 3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALERE--GSSLL---GSD--AGELA-G---A--G----KTG--VTVQ 63 (273)
T ss_dssp CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCT--TCTTC---SCC--TTCSS-S---S--S----CCS--CCEE
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC--chhhh---hhh--HHHHc-C---C--C----cCC--ceec
Confidence 34689999997 99999999999888899999998863 21110 001 01111 0 0 0 001 1121
Q ss_pred eecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+++.+- .++|+|+|+|......+.+...+++|.+ +|+..|
T Consensus 64 --~dl~~~l---~~~DvVIDft~p~~~~~~~~~a~~~G~~-vVigTt 104 (273)
T 1dih_A 64 --SSLDAVK---DDFDVFIDFTRPEGTLNHLAFCRQHGKG-MVIGTT 104 (273)
T ss_dssp --SCSTTTT---TSCSEEEECSCHHHHHHHHHHHHHTTCE-EEECCC
T ss_pred --CCHHHHh---cCCCEEEEcCChHHHHHHHHHHHhCCCC-EEEECC
Confidence 3444432 2689999999887777888888999985 566443
No 79
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.99 E-value=8.8e-06 Score=68.97 Aligned_cols=94 Identities=16% Similarity=0.176 Sum_probs=64.7
Q ss_pred ccEEEEEccChHHHHH-HHHHHcCCCceEEEEecCCCchhhhhhhh-hcccccCcCCCcceEEeCCCeeEECCEEEEEEe
Q 029791 3 KVKIGINGFGRIGRLV-ARVILQRDDVELVAVNDPFITTDYMTYMF-KYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~-~r~~~~~~~~~ivaInd~~~~~~~~~~l~-~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
|+||||+|+|+||+.+ +.++...|+++|+||+|+ +++....+. +|.- ...+
T Consensus 23 mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~--~~~~a~~~a~~~g~--------~~~y----------------- 75 (350)
T 4had_A 23 MLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASR--DLTRAREMADRFSV--------PHAF----------------- 75 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECS--SHHHHHHHHHHHTC--------SEEE-----------------
T ss_pred ccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECC--CHHHHHHHHHHcCC--------Ceee-----------------
Confidence 5899999999999864 677778889999999998 444332221 1210 0001
Q ss_pred ecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.|.+++ ..+.++|.|+=||+...-.+.+...+++|. -|++--|
T Consensus 76 -~d~~el-l~~~~iDaV~I~tP~~~H~~~~~~al~aGk-hVl~EKP 118 (350)
T 4had_A 76 -GSYEEM-LASDVIDAVYIPLPTSQHIEWSIKAADAGK-HVVCEKP 118 (350)
T ss_dssp -SSHHHH-HHCSSCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred -CCHHHH-hcCCCCCEEEEeCCCchhHHHHHHHHhcCC-EEEEeCC
Confidence 111111 112378999999999999999999999996 4677555
No 80
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.98 E-value=5.8e-06 Score=71.82 Aligned_cols=95 Identities=19% Similarity=0.191 Sum_probs=64.6
Q ss_pred ccEEEEEccChHHHHHHHHHHcC--------CCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCE
Q 029791 3 KVKIGINGFGRIGRLVARVILQR--------DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK 74 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~--------~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~ 74 (188)
++||||+|+|.||+.+++++... ++++|+||+|+ +++....+.+ .|| ....+
T Consensus 26 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~--~~~~a~~~a~---~~~----~~~~y----------- 85 (412)
T 4gqa_A 26 RLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQ--DQAMAERHAA---KLG----AEKAY----------- 85 (412)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECS--SHHHHHHHHH---HHT----CSEEE-----------
T ss_pred cceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcC--CHHHHHHHHH---HcC----CCeEE-----------
Confidence 58999999999999999888643 35899999998 4443322211 011 10011
Q ss_pred EEEEEeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 75 PVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 75 ~i~v~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.|.+++ ..+.++|.|+=||+.....+.+...+++|. -|++--|
T Consensus 86 -------~d~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP 128 (412)
T 4gqa_A 86 -------GDWREL-VNDPQVDVVDITSPNHLHYTMAMAAIAAGK-HVYCEKP 128 (412)
T ss_dssp -------SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESC
T ss_pred -------CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHcCC-CeEeecC
Confidence 111111 112378999999999999999999999996 4777666
No 81
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.97 E-value=2.4e-05 Score=65.77 Aligned_cols=93 Identities=19% Similarity=0.250 Sum_probs=64.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
+||||+|+|.+|+.+++.+...+++++++|.|+ +.+....+.+ .+|. . .++ .+
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~--~~~~~~~~~~---~~~~-----~---------------~~~--~~ 54 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSR--KLETAATFAS---RYQN-----I---------------QLF--DQ 54 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECS--SHHHHHHHGG---GSSS-----C---------------EEE--SC
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeC--CHHHHHHHHH---HcCC-----C---------------eEe--CC
Confidence 799999999999999999988888999999997 4443322111 0110 0 011 22
Q ss_pred CCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
++++. +.++|+|+.||+.....+.+...+++|. -|++--|
T Consensus 55 ~~~~l--~~~~D~V~i~tp~~~h~~~~~~al~~gk-~V~~EKP 94 (325)
T 2ho3_A 55 LEVFF--KSSFDLVYIASPNSLHFAQAKAALSAGK-HVILEKP 94 (325)
T ss_dssp HHHHH--TSSCSEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred HHHHh--CCCCCEEEEeCChHHHHHHHHHHHHcCC-cEEEecC
Confidence 32222 2378999999999988888888999985 4666655
No 82
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.97 E-value=3.8e-06 Score=70.80 Aligned_cols=96 Identities=23% Similarity=0.200 Sum_probs=62.3
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEee
Q 029791 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
++||+|+| +||+||.+++.+.+.|+++|+++.|...+. . .|+-. +++. | +.-.| +.++
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~-~----------~G~d~-gel~---G--~~~~g--v~v~-- 79 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSS-F----------VDKDA-SILI---G--SDFLG--VRIT-- 79 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCT-T----------TTSBG-GGGT---T--CSCCS--CBCB--
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcc-c----------cccch-HHhh---c--cCcCC--ceee--
Confidence 58999999 999999999999999999999999974211 1 11111 1110 1 00001 1111
Q ss_pred cCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEE
Q 029791 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkvii 123 (188)
.|++++. .++|+|+|+|......+.+...++.|.+ +|+
T Consensus 80 ~dl~~ll---~~aDVvIDFT~p~a~~~~~~~~l~~Gv~-vVi 117 (288)
T 3ijp_A 80 DDPESAF---SNTEGILDFSQPQASVLYANYAAQKSLI-HII 117 (288)
T ss_dssp SCHHHHT---TSCSEEEECSCHHHHHHHHHHHHHHTCE-EEE
T ss_pred CCHHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEE
Confidence 2333322 1689999999877777788888888885 455
No 83
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=97.96 E-value=6.3e-06 Score=70.48 Aligned_cols=105 Identities=19% Similarity=0.244 Sum_probs=59.8
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCC-------CceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECC
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRD-------DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGE 73 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~-------~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g 73 (188)
|+++||||+|+|.||+.+++.+.+.+ ++++++|.|.... .....+ |. ..|. .. ...+. +.
T Consensus 4 M~~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~--~~~~~~--~~--~~~~-~~--~~~~~-~~--- 70 (331)
T 3c8m_A 4 MKTINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHS--YYNERI--DI--GKVI-SY--KEKGS-LD--- 70 (331)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCE--EECTTC--CH--HHHH-HH--HHTTC-GG---
T ss_pred CcEEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChH--Hhhccc--Ch--HHHh-hh--hccCC-cc---
Confidence 33589999999999999999987654 5999999997422 110000 00 0000 00 00000 00
Q ss_pred EEEEEEe-ecCCCCCCcccCCccEEEeecCcc----cCHHhHHHHHhCCCcEEEEeC
Q 029791 74 KPVTVFG-VRNPEEIPWAETGAEYVVESTGVF----TDKDKAAAHLKGGAKKVIISA 125 (188)
Q Consensus 74 ~~i~v~~-~~~p~~~~w~~~~vdiV~e~tg~~----~~~~~~~~h~~~Gakkviis~ 125 (188)
.++. ..|++++- +.++|+|++|||.. ...+.+...+++|. -|+++
T Consensus 71 ---~~~~~~~d~~~ll--~~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGk--hVvta 120 (331)
T 3c8m_A 71 ---SLEYESISASEAL--ARDFDIVVDATPASADGKKELAFYKETFENGK--DVVTA 120 (331)
T ss_dssp ---GCCSEECCHHHHH--HSSCSEEEECSCCCSSSHHHHHHHHHHHHTTC--EEEEC
T ss_pred ---cccCCCCCHHHHh--CCCCCEEEECCCCCCccchHHHHHHHHHHCCC--eEEec
Confidence 0000 01222221 23789999999986 44567788899987 45653
No 84
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.95 E-value=2.3e-05 Score=69.04 Aligned_cols=101 Identities=13% Similarity=0.086 Sum_probs=66.7
Q ss_pred CCccEEEEEccChHHH-HHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEE
Q 029791 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~kvgI~G~GriGr-~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|+++||||+|+|++|+ .+++.+...+++++++|.|+ +.+....+.+ .+|.-. .. +.+
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~--~~~~~~~~a~---~~g~~~-~~---------------~~~- 138 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSG--NAEKAKIVAA---EYGVDP-RK---------------IYD- 138 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECS--CHHHHHHHHH---HTTCCG-GG---------------EEC-
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHHH---HhCCCc-cc---------------ccc-
Confidence 4568999999999997 89998887788999999998 4443322211 011100 00 001
Q ss_pred eecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
..+.+++. .+.++|+|+.||+.....+.+...+++|. -|++--|
T Consensus 139 -~~~~~~ll-~~~~vD~V~iatp~~~h~~~~~~al~aGk-~Vl~EKP 182 (433)
T 1h6d_A 139 -YSNFDKIA-KDPKIDAVYIILPNSLHAEFAIRAFKAGK-HVMCEKP 182 (433)
T ss_dssp -SSSGGGGG-GCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred -cCCHHHHh-cCCCCCEEEEcCCchhHHHHHHHHHHCCC-cEEEcCC
Confidence 12232221 12368999999999998999999999996 4666555
No 85
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.94 E-value=2.2e-05 Score=69.86 Aligned_cols=93 Identities=17% Similarity=0.256 Sum_probs=60.7
Q ss_pred CccEEEEEccChHHHHHHHHHHc---------CCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEEC
Q 029791 2 GKVKIGINGFGRIGRLVARVILQ---------RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFG 72 (188)
Q Consensus 2 ~~~kvgI~G~GriGr~~~r~~~~---------~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~ 72 (188)
+++||||+|+|.+|+.+++.+.+ .+++++++|.|.. .+....++ + +. . + .
T Consensus 9 k~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~--~~~~~~~~--~--------~~-~------~-~- 67 (444)
T 3mtj_A 9 KPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRN--LDKAEALA--G--------GL-P------L-T- 67 (444)
T ss_dssp SCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSC--HHHHHHHH--T--------TC-C------E-E-
T ss_pred CcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECC--HHHhhhhc--c--------cC-c------c-c-
Confidence 46899999999999999887753 2579999999983 33221111 0 00 0 0 0
Q ss_pred CEEEEEEeecCCCCCCcccCCccEEEeecCc-ccCHHhHHHHHhCCCcEEEEeCC
Q 029791 73 EKPVTVFGVRNPEEIPWAETGAEYVVESTGV-FTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 73 g~~i~v~~~~~p~~~~w~~~~vdiV~e~tg~-~~~~~~~~~h~~~Gakkviis~p 126 (188)
.|++++ ..+.++|+|++|||. ....+.+...+++|.. |+..+|
T Consensus 68 ---------~d~~el-l~d~diDvVve~tp~~~~h~~~~~~AL~aGKh-Vvtenk 111 (444)
T 3mtj_A 68 ---------TNPFDV-VDDPEIDIVVELIGGLEPARELVMQAIANGKH-VVTANK 111 (444)
T ss_dssp ---------SCTHHH-HTCTTCCEEEECCCSSTTHHHHHHHHHHTTCE-EEECCH
T ss_pred ---------CCHHHH-hcCCCCCEEEEcCCCchHHHHHHHHHHHcCCE-EEECCc
Confidence 112111 112378999999996 6777888899999973 444445
No 86
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.94 E-value=1.3e-05 Score=68.33 Aligned_cols=94 Identities=20% Similarity=0.273 Sum_probs=65.6
Q ss_pred ccEEEEEccChHHHHHHHHHHcC-CCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEee
Q 029791 3 KVKIGINGFGRIGRLVARVILQR-DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~-~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
++||||+|+|.+|+.+++++... ++++++++.|+ +.+....+.+- +| +. .+
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~~~~---~~------~~---------------~~-- 64 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDI--DPAALKAAVER---TG------AR---------------GH-- 64 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECS--SHHHHHHHHHH---HC------CE---------------EE--
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcC--CHHHHHHHHHH---cC------Cc---------------ee--
Confidence 58999999999999999999887 78999999998 44433222110 00 00 10
Q ss_pred cCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+++++ ..+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 65 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~v~~EKP 107 (354)
T 3q2i_A 65 ASLTDM-LAQTDADIVILTTPSGLHPTQSIECSEAGF-HVMTEKP 107 (354)
T ss_dssp SCHHHH-HHHCCCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCCC-CEEEeCC
Confidence 122221 112378999999999988899999999994 5677666
No 87
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.94 E-value=9.7e-06 Score=65.46 Aligned_cols=134 Identities=22% Similarity=0.258 Sum_probs=77.7
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
+||||+|+|++|+.+++.+. .++++++++.|..... .. . ..+
T Consensus 1 m~vgiIG~G~mG~~~~~~l~-~~g~~lv~v~d~~~~~-------------------------~~----------~--~~~ 42 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLE-RNGFEIAAILDVRGEH-------------------------EK----------M--VRG 42 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEEECSSCCC-------------------------TT----------E--ESS
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCCEEEEEEecCcch-------------------------hh----------h--cCC
Confidence 48999999999999999988 4679999999863100 00 0 022
Q ss_pred CCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCC-CCCeEEeecCccCCCC-CCceEEcCChhhHhHHH
Q 029791 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNENEYKP-ELNIVSNASCTTNCLAP 161 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~-d~p~~V~gvN~~~~~~-~~~iis~~sCtT~~lap 161 (188)
++++.- .++|+|++|++.....+.+...+++|.. |++..|.. +.+-....+- +.... ...+.-.+.+... ..
T Consensus 43 ~~~l~~--~~~DvVv~~~~~~~~~~~~~~~l~~G~~-vv~~~~~~~~~~~~~~~l~-~~a~~~g~~~~i~~~~~g~--~~ 116 (236)
T 2dc1_A 43 IDEFLQ--REMDVAVEAASQQAVKDYAEKILKAGID-LIVLSTGAFADRDFLSRVR-EVCRKTGRRVYIASGAIGG--LD 116 (236)
T ss_dssp HHHHTT--SCCSEEEECSCHHHHHHHHHHHHHTTCE-EEESCGGGGGSHHHHHHHH-HHHHHHCCCEEECCTTCSC--HH
T ss_pred HHHHhc--CCCCEEEECCCHHHHHHHHHHHHHCCCc-EEEECcccCChHHHHHHHH-HHHHhcCCeEEecCccccC--hH
Confidence 222211 2789999999999888888889999983 44433421 1110000010 00000 1222222333222 23
Q ss_pred HHHHHHhhcCceEEEEEEEeec
Q 029791 162 LAKVIHDKFGIVEGLMTTVHSI 183 (188)
Q Consensus 162 ~l~~l~~~~gI~~~~~ttiha~ 183 (188)
.++.... |++++.+++.|+.
T Consensus 117 ~~~~~~~--~~~~~~~~~~~~~ 136 (236)
T 2dc1_A 117 AIFSASE--LIEEIVLTTRKNW 136 (236)
T ss_dssp HHHHTGG--GEEEEEEEEEEEG
T ss_pred HHHHhhc--cccEEEEEEEcCh
Confidence 3444443 8899998888764
No 88
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.92 E-value=1.4e-05 Score=66.95 Aligned_cols=92 Identities=20% Similarity=0.268 Sum_probs=65.1
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeec
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
++||||+|+|++|+.+++.+.+.++++++++.|+ +.+.... +. .. +..+ .
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~--~~~~~~~----------~~--------~~--------~~~~--~ 59 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVRLASS--NPDNLAL----------VP--------PG--------CVIE--S 59 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEES--CHHHHTT----------CC--------TT--------CEEE--S
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHHH----------HH--------hh--------Cccc--C
Confidence 5899999999999999999988888999999997 4443211 11 00 1111 2
Q ss_pred CCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
+++++. .+.++|+|+.||+.....+.+...+++|. .|++.-|
T Consensus 60 ~~~~~l-~~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~v~~eKP 101 (315)
T 3c1a_A 60 DWRSVV-SAPEVEAVIIATPPATHAEITLAAIASGK-AVLVEKP 101 (315)
T ss_dssp STHHHH-TCTTCCEEEEESCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred CHHHHh-hCCCCCEEEEeCChHHHHHHHHHHHHCCC-cEEEcCC
Confidence 232221 12378999999999988899998999995 4666655
No 89
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.90 E-value=1.6e-05 Score=68.08 Aligned_cols=96 Identities=21% Similarity=0.362 Sum_probs=58.7
Q ss_pred ccEEEEEccChHHHHHHHHHHcC--------CCceEEEEecCCCch-hh--hhhhh--hcccccCcCCCcceEEeCCCee
Q 029791 3 KVKIGINGFGRIGRLVARVILQR--------DDVELVAVNDPFITT-DY--MTYMF--KYDSVHGQWKHHELKVKDDKTL 69 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~--------~~~~ivaInd~~~~~-~~--~~~l~--~yDS~~g~~~~~~v~~~~~~~l 69 (188)
|+||||+|+|.||+.+++.+.+. +++++++|.|..... +. +...+ ++.. +++. .
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~--~~~~-~---------- 68 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRET--GMLR-D---------- 68 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHH--SSCS-B----------
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccC--cccc-C----------
Confidence 37999999999999999999877 789999999974211 00 00001 0100 0110 0
Q ss_pred EECCEEEEEEeecCCCCCCcccCCccEEEeecCcccC----HHhHHHHHhCCCcEEEEeC
Q 029791 70 LFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTD----KDKAAAHLKGGAKKVIISA 125 (188)
Q Consensus 70 ~i~g~~i~v~~~~~p~~~~w~~~~vdiV~e~tg~~~~----~~~~~~h~~~Gakkviis~ 125 (188)
..|++++ ..+.++|+|++||+.... .+.....+++|. -|++.
T Consensus 69 -----------~~d~~~l-l~~~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGk--hVv~~ 114 (327)
T 3do5_A 69 -----------DAKAIEV-VRSADYDVLIEASVTRVDGGEGVNYIREALKRGK--HVVTS 114 (327)
T ss_dssp -----------CCCHHHH-HHHSCCSEEEECCCCC----CHHHHHHHHHTTTC--EEEEC
T ss_pred -----------CCCHHHH-hcCCCCCEEEECCCCcccchhHHHHHHHHHHCCC--eEEec
Confidence 0011111 112368999999987764 677788899998 44544
No 90
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.82 E-value=3.2e-05 Score=68.79 Aligned_cols=107 Identities=14% Similarity=0.274 Sum_probs=62.8
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCC-CeeE---ECCEEEE
Q 029791 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDD-KTLL---FGEKPVT 77 (188)
Q Consensus 2 ~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~-~~l~---i~g~~i~ 77 (188)
+++||||+|+|++|+.+++.+...+++++++|+|.. ++......+ ..||. . ..+...+. ..+. -.+. +.
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~--~era~~~a~--~~yG~-~-~~~~~~~~~~~i~~a~~~g~-~~ 94 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSARR--LPNTFKAIR--TAYGD-E-ENAREATTESAMTRAIEAGK-IA 94 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSS--THHHHHHHH--HHHSS-S-TTEEECSSHHHHHHHHHTTC-EE
T ss_pred CceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCC--HHHHHHHHH--HhcCC-c-cccccccchhhhhhhhccCC-ce
Confidence 368999999999999999998888899999999984 443322221 00120 0 00100000 0000 0010 11
Q ss_pred EEeecCCCCCCcccCCccEEEeecCcc-cCHHhHHHHHhCCC
Q 029791 78 VFGVRNPEEIPWAETGAEYVVESTGVF-TDKDKAAAHLKGGA 118 (188)
Q Consensus 78 v~~~~~p~~~~w~~~~vdiV~e~tg~~-~~~~~~~~h~~~Ga 118 (188)
++ .|.+++ ..+.++|+|++|||.. ...+.+...+++|.
T Consensus 95 v~--~D~eeL-L~d~dIDaVviaTp~p~~H~e~a~~AL~AGK 133 (446)
T 3upl_A 95 VT--DDNDLI-LSNPLIDVIIDATGIPEVGAETGIAAIRNGK 133 (446)
T ss_dssp EE--SCHHHH-HTCTTCCEEEECSCCHHHHHHHHHHHHHTTC
T ss_pred EE--CCHHHH-hcCCCCCEEEEcCCChHHHHHHHHHHHHcCC
Confidence 21 233322 1233799999999864 45678888999987
No 91
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.80 E-value=0.00012 Score=61.49 Aligned_cols=94 Identities=20% Similarity=0.254 Sum_probs=62.6
Q ss_pred CCccEEEEEccChHHH-HHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEE
Q 029791 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~kvgI~G~GriGr-~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|| +||||+|+|.+|+ .+++.+...++++++ +.|+ +.+....+.+ .+|. ...+
T Consensus 1 m~-~~igiIG~G~ig~~~~~~~l~~~~~~~l~-v~d~--~~~~~~~~a~---~~g~----~~~~---------------- 53 (323)
T 1xea_A 1 MS-LKIAMIGLGDIAQKAYLPVLAQWPDIELV-LCTR--NPKVLGTLAT---RYRV----SATC---------------- 53 (323)
T ss_dssp -C-EEEEEECCCHHHHHTHHHHHTTSTTEEEE-EECS--CHHHHHHHHH---HTTC----CCCC----------------
T ss_pred CC-cEEEEECCCHHHHHHHHHHHHhCCCceEE-EEeC--CHHHHHHHHH---HcCC----Cccc----------------
Confidence 54 8999999999998 488988877889999 9998 4443322211 0110 0000
Q ss_pred eecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
....+.+ +.++|+|+.||+.....+.+...+++|.. |++.-|
T Consensus 54 -~~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~Gk~-V~~EKP 95 (323)
T 1xea_A 54 -TDYRDVL---QYGVDAVMIHAATDVHSTLAAFFLHLGIP-TFVDKP 95 (323)
T ss_dssp -SSTTGGG---GGCCSEEEECSCGGGHHHHHHHHHHTTCC-EEEESC
T ss_pred -cCHHHHh---hcCCCEEEEECCchhHHHHHHHHHHCCCe-EEEeCC
Confidence 0111122 23789999999999888888888999863 666555
No 92
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.78 E-value=4e-05 Score=66.99 Aligned_cols=98 Identities=23% Similarity=0.227 Sum_probs=64.5
Q ss_pred CCccEEEEEccCh---HHHHHHHHHHcCCCceEEE-EecCCCchhhhhhhh-hcccccCcCCCcceEEeCCCeeEECCEE
Q 029791 1 MGKVKIGINGFGR---IGRLVARVILQRDDVELVA-VNDPFITTDYMTYMF-KYDSVHGQWKHHELKVKDDKTLLFGEKP 75 (188)
Q Consensus 1 m~~~kvgI~G~Gr---iGr~~~r~~~~~~~~~iva-Ind~~~~~~~~~~l~-~yDS~~g~~~~~~v~~~~~~~l~i~g~~ 75 (188)
|+++||||+|+|+ ||+.+++++...+++++++ |.|+ +++....+. +|.- + ....+
T Consensus 35 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~--~~~~a~~~a~~~g~-----~-~~~~~------------ 94 (417)
T 3v5n_A 35 QKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSS--TPEKAEASGRELGL-----D-PSRVY------------ 94 (417)
T ss_dssp CCCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCS--SHHHHHHHHHHHTC-----C-GGGBC------------
T ss_pred CCcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCC--CHHHHHHHHHHcCC-----C-ccccc------------
Confidence 4468999999999 9999999988888899997 9998 444332221 1211 0 00000
Q ss_pred EEEEeecCCCCCCccc-----CCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 76 VTVFGVRNPEEIPWAE-----TGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 76 i~v~~~~~p~~~~w~~-----~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+.+++- .+ .++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 95 ------~~~~~ll-~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP 142 (417)
T 3v5n_A 95 ------SDFKEMA-IREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRGI-HVICDKP 142 (417)
T ss_dssp ------SCHHHHH-HHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTTC-EEEEESS
T ss_pred ------CCHHHHH-hcccccCCCCcEEEECCCcHHHHHHHHHHHhCCC-eEEEECC
Confidence 0111110 00 268999999999999999999999996 4777666
No 93
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.77 E-value=3.8e-05 Score=66.54 Aligned_cols=103 Identities=18% Similarity=0.143 Sum_probs=65.3
Q ss_pred CCccEEEEEccCh---HHHHHHHHHHcCCCceEEE-EecCCCchhhhhhhh-hcccccCcCCCcceEEeCCCeeEECCEE
Q 029791 1 MGKVKIGINGFGR---IGRLVARVILQRDDVELVA-VNDPFITTDYMTYMF-KYDSVHGQWKHHELKVKDDKTLLFGEKP 75 (188)
Q Consensus 1 m~~~kvgI~G~Gr---iGr~~~r~~~~~~~~~iva-Ind~~~~~~~~~~l~-~yDS~~g~~~~~~v~~~~~~~l~i~g~~ 75 (188)
|+++||||+|+|+ ||+.+++++...+++++++ |.|+ +++....+. +|....-+.. .+ + +.+
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~--~~~~a~~~a~~~g~~~~~~~-~~--~---~~l------ 75 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDI--DPIRGSAFGEQLGVDSERCY-AD--Y---LSM------ 75 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCS--SHHHHHHHHHHTTCCGGGBC-SS--H---HHH------
T ss_pred cCcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCC--CHHHHHHHHHHhCCCcceee-CC--H---HHH------
Confidence 4568999999999 9999999988777899998 8897 444332221 1211000000 00 0 001
Q ss_pred EEEEeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 76 VTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 76 i~v~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
+. ++... +.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 76 ---l~--~~~~~---~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 117 (398)
T 3dty_A 76 ---FE--QEARR---ADGIQAVSIATPNGTHYSITKAALEAGL-HVVCEKP 117 (398)
T ss_dssp ---HH--HHTTC---TTCCSEEEEESCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred ---Hh--ccccc---CCCCCEEEECCCcHHHHHHHHHHHHCCC-eEEEeCC
Confidence 00 00000 0258999999999999999999999996 4666555
No 94
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.77 E-value=5.3e-05 Score=64.28 Aligned_cols=95 Identities=24% Similarity=0.248 Sum_probs=65.9
Q ss_pred ccEEEEEccC-hHHHHHHHHHHcC-CCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEe
Q 029791 3 KVKIGINGFG-RIGRLVARVILQR-DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 3 ~~kvgI~G~G-riGr~~~r~~~~~-~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
++||||+|+| .+|+.+++++... +++++++|.|+ +++....+.+ .||. .. ++
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~a~---~~~~-----~~---------------~~- 71 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSR--TRSHAEEFAK---MVGN-----PA---------------VF- 71 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECS--SHHHHHHHHH---HHSS-----CE---------------EE-
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcC--CHHHHHHHHH---HhCC-----Cc---------------cc-
Confidence 5899999999 8999999999887 78999999998 4444322211 0110 00 00
Q ss_pred ecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.|.+++ ..+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 72 -~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 114 (340)
T 1zh8_A 72 -DSYEEL-LESGLVDAVDLTLPVELNLPFIEKALRKGV-HVICEKP 114 (340)
T ss_dssp -SCHHHH-HHSSCCSEEEECCCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred -CCHHHH-hcCCCCCEEEEeCCchHHHHHHHHHHHCCC-cEEEeCC
Confidence 111111 112368999999999998899999999995 5777666
No 95
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.74 E-value=0.00015 Score=59.50 Aligned_cols=38 Identities=26% Similarity=0.443 Sum_probs=32.1
Q ss_pred cEEEEEcc-ChHHHHHHHHHHcCCCceEEEEecCCCchh
Q 029791 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTD 41 (188)
Q Consensus 4 ~kvgI~G~-GriGr~~~r~~~~~~~~~ivaInd~~~~~~ 41 (188)
+||+|+|+ |++||.+++.+.+.++++++++.|...+++
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~ 39 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLS 39 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHH
Confidence 48999995 999999999998888899999998743333
No 96
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.72 E-value=4.7e-05 Score=65.25 Aligned_cols=96 Identities=15% Similarity=0.251 Sum_probs=61.7
Q ss_pred CCccEEEEEccChHHHH-HHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEE
Q 029791 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~-~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|+++||||+|+|++|.. ++.++. .+++++++|.|+ +++....+.+ .||. ...+
T Consensus 24 m~~irvgiiG~G~~~~~~~~~~~~-~~~~~lvav~d~--~~~~a~~~a~---~~~~----~~~~---------------- 77 (361)
T 3u3x_A 24 MDELRFAAVGLNHNHIYGQVNCLL-RAGARLAGFHEK--DDALAAEFSA---VYAD----ARRI---------------- 77 (361)
T ss_dssp --CCEEEEECCCSTTHHHHHHHHH-HTTCEEEEEECS--CHHHHHHHHH---HSSS----CCEE----------------
T ss_pred ccCcEEEEECcCHHHHHHHHHHhh-cCCcEEEEEEcC--CHHHHHHHHH---HcCC----Cccc----------------
Confidence 34689999999999964 455554 478999999998 4443322211 0110 0000
Q ss_pred eecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+.+++ ..+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 78 --~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP 120 (361)
T 3u3x_A 78 --ATAEEI-LEDENIGLIVSAAVSSERAELAIRAMQHGK-DVLVDKP 120 (361)
T ss_dssp --SCHHHH-HTCTTCCEEEECCCHHHHHHHHHHHHHTTC-EEEEESC
T ss_pred --CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCCC-eEEEeCC
Confidence 111111 112368999999999999999999999995 5777666
No 97
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.70 E-value=4.6e-05 Score=65.79 Aligned_cols=93 Identities=20% Similarity=0.292 Sum_probs=65.5
Q ss_pred ccEEEEEccC-hHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhh-hcccccCcCCCcceEEeCCCeeEECCEEEEEEe
Q 029791 3 KVKIGINGFG-RIGRLVARVILQRDDVELVAVNDPFITTDYMTYMF-KYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 3 ~~kvgI~G~G-riGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~-~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
++||||+|+| ++|+.+++++...+++++++|.|+ +.+....+. +|+- . .+
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~~~g~--------~-~~----------------- 53 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDP--NEDVRERFGKEYGI--------P-VF----------------- 53 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECS--CHHHHHHHHHHHTC--------C-EE-----------------
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeC--CHHHHHHHHHHcCC--------C-eE-----------------
Confidence 4899999999 999999999988889999999998 444332211 1110 0 00
Q ss_pred ecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+.+++ ..+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 54 -~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-~Vl~EKP 96 (387)
T 3moi_A 54 -ATLAEM-MQHVQMDAVYIASPHQFHCEHVVQASEQGL-HIIVEKP 96 (387)
T ss_dssp -SSHHHH-HHHSCCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred -CCHHHH-HcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-ceeeeCC
Confidence 111111 112368999999999988899999999995 5777666
No 98
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.69 E-value=4.3e-05 Score=63.78 Aligned_cols=88 Identities=16% Similarity=0.205 Sum_probs=62.2
Q ss_pred ccEEEEEccChHHHHHHHHHHc---CCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEE
Q 029791 3 KVKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~---~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
++||||+|+|.||+.+++.+.. .++++++++.|.. . +. . . -+ +..
T Consensus 7 ~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~--~---------------~a-~--~--~g--~~~-------- 54 (294)
T 1lc0_A 7 KFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRR--E---------------LG-S--L--DE--VRQ-------- 54 (294)
T ss_dssp SEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSS--C---------------CC-E--E--TT--EEB--------
T ss_pred cceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECch--H---------------HH-H--H--cC--CCC--------
Confidence 6899999999999999998875 5689999999862 1 00 0 0 01 100
Q ss_pred eecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+.+++ ..+.++|+|+.||+.....+.+...+++|. -|++--|
T Consensus 55 --~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 97 (294)
T 1lc0_A 55 --ISLEDA-LRSQEIDVAYICSESSSHEDYIRQFLQAGK-HVLVEYP 97 (294)
T ss_dssp --CCHHHH-HHCSSEEEEEECSCGGGHHHHHHHHHHTTC-EEEEESC
T ss_pred --CCHHHH-hcCCCCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEeCC
Confidence 122221 112379999999999999999999999996 4677656
No 99
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.66 E-value=9.4e-05 Score=62.24 Aligned_cols=94 Identities=21% Similarity=0.326 Sum_probs=64.0
Q ss_pred ccEEEEEcc-ChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEee
Q 029791 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~kvgI~G~-GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
|+||||+|+ |.+|+.+++++... +.+++++.|+..+.. .. +.. +. . ..+ +
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~~---~~---~~~---~~-~-~~~-------~---------- 53 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEV-GGVLVASLDPATNVG---LV---DSF---FP-E-AEF-------F---------- 53 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHT-TCEEEEEECSSCCCG---GG---GGT---CT-T-CEE-------E----------
T ss_pred ceEEEEECCChHHHHHHHHHHHhC-CCEEEEEEcCCHHHH---HH---Hhh---CC-C-Cce-------e----------
Confidence 479999999 79999999999876 599999999853321 11 111 11 0 010 1
Q ss_pred cCCCCCC-----c--ccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 82 RNPEEIP-----W--AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 82 ~~p~~~~-----w--~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+.+++. | .+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 54 ~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~aGk-hVl~EKP 104 (312)
T 3o9z_A 54 TEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLGA-NALSEKP 104 (312)
T ss_dssp SCHHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred CCHHHHHHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHHCCC-eEEEECC
Confidence 1111110 0 12379999999999999999999999995 4777656
No 100
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.65 E-value=3.9e-05 Score=68.52 Aligned_cols=100 Identities=15% Similarity=0.154 Sum_probs=67.4
Q ss_pred CCccEEEEEcc----ChHHHHHHHHHHcC-CCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEE
Q 029791 1 MGKVKIGINGF----GRIGRLVARVILQR-DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKP 75 (188)
Q Consensus 1 m~~~kvgI~G~----GriGr~~~r~~~~~-~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~ 75 (188)
|+++||||+|+ |.+|+.+++++... +++++++|.|+ +.+....+.+ .+|- + .+. .+
T Consensus 37 m~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~--~~~~a~~~a~---~~g~-~--~~~-------~~---- 97 (479)
T 2nvw_A 37 SRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNP--TLKSSLQTIE---QLQL-K--HAT-------GF---- 97 (479)
T ss_dssp GCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECS--CHHHHHHHHH---HTTC-T--TCE-------EE----
T ss_pred CCcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeC--CHHHHHHHHH---HcCC-C--cce-------ee----
Confidence 34589999999 99999999999887 88999999998 4443322211 0110 0 000 01
Q ss_pred EEEEeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCC-----cEEEEeCC
Q 029791 76 VTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA-----KKVIISAP 126 (188)
Q Consensus 76 i~v~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Ga-----kkviis~p 126 (188)
.+.+++ ..+.++|+|+-||+.....+.+...+++|. |-|++--|
T Consensus 98 ------~d~~el-l~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP 146 (479)
T 2nvw_A 98 ------DSLESF-AQYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWA 146 (479)
T ss_dssp ------SCHHHH-HHCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESS
T ss_pred ------CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCC
Confidence 112111 111368999999999988899999999993 66888666
No 101
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.65 E-value=0.0001 Score=62.19 Aligned_cols=95 Identities=14% Similarity=0.199 Sum_probs=60.7
Q ss_pred CCccEEEEEccChHHH-HHHHHHHcCCCceEEEEecCCCchhhhhhhh-hcccccCcCCCcceEEeCCCeeEECCEEEEE
Q 029791 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMF-KYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 1 m~~~kvgI~G~GriGr-~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~-~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
|+++||||+|+|.+|. .+++++. .+++++++|.|+. .+....+. +|.. ... +
T Consensus 2 M~~~rvgiiG~G~~~~~~~~~~l~-~~~~~lvav~d~~--~~~~~~~a~~~~~---------~~~-------~------- 55 (336)
T 2p2s_A 2 MKKIRFAAIGLAHNHIYDMCQQLI-DAGAELAGVFESD--SDNRAKFTSLFPS---------VPF-------A------- 55 (336)
T ss_dssp --CCEEEEECCSSTHHHHHHHHHH-HTTCEEEEEECSC--TTSCHHHHHHSTT---------CCB-------C-------
T ss_pred CCccEEEEECCChHHHHHhhhhhc-CCCcEEEEEeCCC--HHHHHHHHHhcCC---------Ccc-------c-------
Confidence 7679999999999996 5667664 4679999999984 33221111 1110 000 0
Q ss_pred EeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+.+++ ..+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 56 ---~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-hVl~EKP 98 (336)
T 2p2s_A 56 ---ASAEQL-ITDASIDLIACAVIPCDRAELALRTLDAGK-DFFTAKP 98 (336)
T ss_dssp ---SCHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred ---CCHHHH-hhCCCCCEEEEeCChhhHHHHHHHHHHCCC-cEEEeCC
Confidence 111111 111268999999999999999999999986 3666656
No 102
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.64 E-value=0.00016 Score=60.66 Aligned_cols=93 Identities=19% Similarity=0.215 Sum_probs=61.4
Q ss_pred cEEEEEccChHHHHH-HHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeec
Q 029791 4 VKIGINGFGRIGRLV-ARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 4 ~kvgI~G~GriGr~~-~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
+||||+|+|.+|+.+ ++.+.+ +++++++|.|+ +.+....+.+ .+|.-. . + .
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~--~~~~~~~~~~---~~g~~~----~--------~----------~ 52 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA-TGGEVVSMMST--SAERGAAYAT---ENGIGK----S--------V----------T 52 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH-TTCEEEEEECS--CHHHHHHHHH---HTTCSC----C--------B----------S
T ss_pred CeEEEEcccHHHHHhhhHHhhc-CCCeEEEEECC--CHHHHHHHHH---HcCCCc----c--------c----------C
Confidence 489999999999997 788877 78999999998 4443322211 011000 0 0 0
Q ss_pred CCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
+.+++ ..+.++|+|+.||+.....+.+...+++|. .|++.-|
T Consensus 53 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~v~~ekP 94 (332)
T 2glx_A 53 SVEEL-VGDPDVDAVYVSTTNELHREQTLAAIRAGK-HVLCEKP 94 (332)
T ss_dssp CHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred CHHHH-hcCCCCCEEEEeCChhHhHHHHHHHHHCCC-eEEEeCC
Confidence 11111 011268999999999888888888899985 4666555
No 103
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.62 E-value=2.6e-05 Score=68.69 Aligned_cols=98 Identities=15% Similarity=0.197 Sum_probs=66.6
Q ss_pred ccEEEEEcc----ChHHHHHHHHHHcC-CCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEE
Q 029791 3 KVKIGINGF----GRIGRLVARVILQR-DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVT 77 (188)
Q Consensus 3 ~~kvgI~G~----GriGr~~~r~~~~~-~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~ 77 (188)
++||||+|+ |++|+.+++++... +++++++|.|+ +.+....+.+ .||. . .+ +
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~a~---~~g~-~--~~---------------~ 76 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSP--KIETSIATIQ---RLKL-S--NA---------------T 76 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECS--SHHHHHHHHH---HTTC-T--TC---------------E
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeC--CHHHHHHHHH---HcCC-C--cc---------------e
Confidence 589999999 99999999999888 89999999998 4443322211 0110 0 00 0
Q ss_pred EEeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCC-----cEEEEeCC
Q 029791 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA-----KKVIISAP 126 (188)
Q Consensus 78 v~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Ga-----kkviis~p 126 (188)
++ .+.+++. .+.++|+|+-||+.....+.+...+++|. |-|++--|
T Consensus 77 ~~--~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP 127 (438)
T 3btv_A 77 AF--PTLESFA-SSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWA 127 (438)
T ss_dssp EE--SSHHHHH-HCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESS
T ss_pred ee--CCHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCc
Confidence 11 1222221 12368999999999988899999999994 56777655
No 104
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.57 E-value=0.00016 Score=61.04 Aligned_cols=94 Identities=22% Similarity=0.164 Sum_probs=64.4
Q ss_pred ccEEEEEcc-ChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEee
Q 029791 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~kvgI~G~-GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
|+||||+|+ |.+|+.+++++.+. +.+++++.|+..+... .+..+ . ....+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~~~------~~~~~---~-~~~~~------------------ 53 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT-GNCLVSAYDINDSVGI------IDSIS---P-QSEFF------------------ 53 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT-TCEEEEEECSSCCCGG------GGGTC---T-TCEEE------------------
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC-CCEEEEEEcCCHHHHH------HHhhC---C-CCcEE------------------
Confidence 479999999 79999999999876 6999999998533211 11111 1 10001
Q ss_pred cCCCCCC--------cccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 82 RNPEEIP--------WAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 82 ~~p~~~~--------w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+.+++. ..+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 54 ~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~~~H~~~~~~al~aGk-hVl~EKP 105 (318)
T 3oa2_A 54 TEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLGC-DVICEKP 105 (318)
T ss_dssp SSHHHHHHHHHHHTTSTTTSCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred CCHHHHHHhhhhhhhccCCCCcEEEECCCcHHHHHHHHHHHHCCC-eEEEECC
Confidence 1111110 013479999999999999999999999996 4777666
No 105
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.49 E-value=0.00026 Score=49.66 Aligned_cols=96 Identities=15% Similarity=0.224 Sum_probs=58.0
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeec
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
++||.|.|.|.+|+.+++.+...+..+++.+. . +.+.+..+... + +.. +..+ ..
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~-r--~~~~~~~~~~~---------~-~~~-----~~~d--------~~ 58 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVAD-H--DLAALAVLNRM---------G-VAT-----KQVD--------AK 58 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEE-S--CHHHHHHHHTT---------T-CEE-----EECC--------TT
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEe-C--CHHHHHHHHhC---------C-CcE-----EEec--------CC
Confidence 36999999999999999999877547766654 3 33333222110 0 010 0000 01
Q ss_pred CCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEe
Q 029791 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIIS 124 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis 124 (188)
+++.+.-.-.++|+||.|+|.......+...++.|++.+.++
T Consensus 59 ~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 59 DEAGLAKALGGFDAVISAAPFFLTPIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp CHHHHHHHTTTCSEEEECSCGGGHHHHHHHHHHTTCEEECCC
T ss_pred CHHHHHHHHcCCCEEEECCCchhhHHHHHHHHHhCCCEEEec
Confidence 111110001278999999998877777788888999765444
No 106
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=97.47 E-value=0.00015 Score=60.00 Aligned_cols=81 Identities=20% Similarity=0.234 Sum_probs=58.6
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeec
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
.+||++.|+|.||+.++|. . ++|++++.+ +. . + .| |- . ...
T Consensus 12 ~~rV~i~G~GaIG~~v~~~---~-~leLv~v~~-----~k--------------~-g--------el---gv--~--a~~ 52 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL---G-NFEKIYAYD-----RI--------------S-K--------DI---PG--V--VRL 52 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH---S-CCSEEEEEC-----SS--------------C-C--------CC---SS--S--EEC
T ss_pred cceEEEECcCHHHHHHHhc---C-CcEEEEEEe-----cc--------------c-c--------cc---Cc--e--eeC
Confidence 3799999999999999998 3 799999876 11 0 1 12 11 1 125
Q ss_pred CCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
|.+.+.. ++|+|+||++...-.+.....|++|+. |++.++
T Consensus 53 d~d~lla---~pD~VVe~A~~~av~e~~~~iL~aG~d-vv~~S~ 92 (253)
T 1j5p_A 53 DEFQVPS---DVSTVVECASPEAVKEYSLQILKNPVN-YIIIST 92 (253)
T ss_dssp SSCCCCT---TCCEEEECSCHHHHHHHHHHHTTSSSE-EEECCG
T ss_pred CHHHHhh---CCCEEEECCCHHHHHHHHHHHHHCCCC-EEEcCh
Confidence 6777762 789999999988766778889999995 444433
No 107
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.41 E-value=5.1e-05 Score=64.19 Aligned_cols=97 Identities=12% Similarity=0.099 Sum_probs=63.3
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCC--chhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEE
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFI--TTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~--~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
|| +||||+|+|.+|+.+++++ .+++++++|.|+.. ..+..+..++ .||. . .. +
T Consensus 1 M~-~rvgiiG~G~~~~~~~~~l--~~~~~lvav~d~~~~~~~~~~~~~~~---~~~~---~-~~---------------~ 55 (337)
T 3ip3_A 1 MS-LKICVIGSSGHFRYALEGL--DEECSITGIAPGVPEEDLSKLEKAIS---EMNI---K-PK---------------K 55 (337)
T ss_dssp -C-EEEEEECSSSCHHHHHTTC--CTTEEEEEEECSSTTCCCHHHHHHHH---TTTC---C-CE---------------E
T ss_pred Cc-eEEEEEccchhHHHHHHhc--CCCcEEEEEecCCchhhHHHHHHHHH---HcCC---C-Cc---------------c
Confidence 54 8999999999999888877 77899999999843 1223322211 0110 0 00 0
Q ss_pred EeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
+ .|.+++ ..+.++|.|+-||+.....+.+...+++|. -|++--|
T Consensus 56 ~--~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP 99 (337)
T 3ip3_A 56 Y--NNWWEM-LEKEKPDILVINTVFSLNGKILLEALERKI-HAFVEKP 99 (337)
T ss_dssp C--SSHHHH-HHHHCCSEEEECSSHHHHHHHHHHHHHTTC-EEEECSS
T ss_pred c--CCHHHH-hcCCCCCEEEEeCCcchHHHHHHHHHHCCC-cEEEeCC
Confidence 0 112222 112368999999999988899999999996 4777666
No 108
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=97.26 E-value=0.00025 Score=60.83 Aligned_cols=96 Identities=13% Similarity=0.201 Sum_probs=61.8
Q ss_pred CCccEEEEEc-cChHHHH-HH----HHHHcCCCceEE---------EEecCCCchhhhhhhh-hcccccCcCCCcceEEe
Q 029791 1 MGKVKIGING-FGRIGRL-VA----RVILQRDDVELV---------AVNDPFITTDYMTYMF-KYDSVHGQWKHHELKVK 64 (188)
Q Consensus 1 m~~~kvgI~G-~GriGr~-~~----r~~~~~~~~~iv---------aInd~~~~~~~~~~l~-~yDS~~g~~~~~~v~~~ 64 (188)
|+++||||+| +|++|+. ++ +++.+.++++++ +|.|. +++....+. +|.. ..-+
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~--~~~~a~~~a~~~~~--------~~~~- 72 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGR--SAEKVEALAKRFNI--------ARWT- 72 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECS--SSHHHHHHHHHTTC--------CCEE-
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcC--CHHHHHHHHHHhCC--------Cccc-
Confidence 4468999999 9999997 77 777766655544 78887 344332221 1111 0000
Q ss_pred CCCeeEECCEEEEEEeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 65 DDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 65 ~~~~l~i~g~~i~v~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.|.+++ ..+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 73 -----------------~~~~~l-l~~~~iD~V~i~tp~~~h~~~~~~al~~Gk-~V~~EKP 115 (383)
T 3oqb_A 73 -----------------TDLDAA-LADKNDTMFFDAATTQARPGLLTQAINAGK-HVYCEKP 115 (383)
T ss_dssp -----------------SCHHHH-HHCSSCCEEEECSCSSSSHHHHHHHHTTTC-EEEECSC
T ss_pred -----------------CCHHHH-hcCCCCCEEEECCCchHHHHHHHHHHHCCC-eEEEcCC
Confidence 111111 111268999999999999999999999995 4666445
No 109
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=97.22 E-value=0.0003 Score=56.51 Aligned_cols=94 Identities=18% Similarity=0.145 Sum_probs=63.1
Q ss_pred ccEEEEEccChHHHHHHHHH-HcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEee
Q 029791 3 KVKIGINGFGRIGRLVARVI-LQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~-~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
..||+|+|.|.+|+.+++.+ .+. +++++++.|. +++.. | -.++|.++. ..
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~--dp~k~----------------------g--~~i~gv~V~--~~ 130 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDV--DPEKV----------------------G--RPVRGGVIE--HV 130 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEES--CTTTT----------------------T--CEETTEEEE--EG
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeC--CHHHH----------------------h--hhhcCCeee--cH
Confidence 36899999999999999863 344 7999999986 33221 1 113333332 22
Q ss_pred cCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCC
Q 029791 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps 127 (188)
.+.+++ ..+ ++|.|+-|++.....+-+...+++|++-++.-.|-
T Consensus 131 ~dl~el-l~~-~ID~ViIA~Ps~~~~ei~~~l~~aGi~~Ilnf~P~ 174 (211)
T 2dt5_A 131 DLLPQR-VPG-RIEIALLTVPREAAQKAADLLVAAGIKGILNFAPV 174 (211)
T ss_dssp GGHHHH-STT-TCCEEEECSCHHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred HhHHHH-HHc-CCCEEEEeCCchhHHHHHHHHHHcCCCEEEECCcc
Confidence 333332 134 79999999998877777778888998755455663
No 110
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.19 E-value=0.00094 Score=53.76 Aligned_cols=94 Identities=12% Similarity=0.187 Sum_probs=59.1
Q ss_pred ccEEEEEccChHHHHHHHH-HHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEee
Q 029791 3 KVKIGINGFGRIGRLVARV-ILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~-~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
..||+|+|.|.+|+.+++. .+..++++++++.|. +++.. | -.++|.++. ..
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~--dp~k~----------------------g--~~i~gv~V~--~~ 136 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDI--NESKI----------------------G--TEVGGVPVY--NL 136 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEES--CTTTT----------------------T--CEETTEEEE--EG
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeC--CHHHH----------------------H--hHhcCCeee--ch
Confidence 3689999999999999995 334557999999996 33321 1 123343332 22
Q ss_pred cCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCC
Q 029791 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps 127 (188)
.+.+++- .+ . |+|+-|++.....+-+...+++|.+.++.-+|-
T Consensus 137 ~dl~eli-~~-~-D~ViIAvPs~~~~ei~~~l~~aGi~~Ilnf~P~ 179 (215)
T 2vt3_A 137 DDLEQHV-KD-E-SVAILTVPAVAAQSITDRLVALGIKGILNFTPA 179 (215)
T ss_dssp GGHHHHC-SS-C-CEEEECSCHHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred hhHHHHH-Hh-C-CEEEEecCchhHHHHHHHHHHcCCCEEEEcCce
Confidence 3333321 12 3 999999998777777788888999876666664
No 111
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=97.12 E-value=0.00036 Score=61.02 Aligned_cols=108 Identities=15% Similarity=0.186 Sum_probs=60.7
Q ss_pred cEEEEEcc-ChHHHHHHHHHHcCCC-ceEEEE-ecCCCchhhhhhhhh-cccccCcCCCcceEEeCCC---ee--EECCE
Q 029791 4 VKIGINGF-GRIGRLVARVILQRDD-VELVAV-NDPFITTDYMTYMFK-YDSVHGQWKHHELKVKDDK---TL--LFGEK 74 (188)
Q Consensus 4 ~kvgI~G~-GriGr~~~r~~~~~~~-~~ivaI-nd~~~~~~~~~~l~~-yDS~~g~~~~~~v~~~~~~---~l--~i~g~ 74 (188)
+||+|.|+ |.||+.+++.+...|+ ++++++ .+. +.+.+....+ |.. ..+...+.+ .+ .+.+-
T Consensus 5 ~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~--ni~~l~~~~~~f~~-------~~v~v~d~~~~~~l~~~l~~~ 75 (388)
T 1r0k_A 5 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR--NVKDLADAAKRTNA-------KRAVIADPSLYNDLKEALAGS 75 (388)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS--CHHHHHHHHHHTTC-------SEEEESCGGGHHHHHHHTTTC
T ss_pred eEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCC--CHHHHHHHHHHcCC-------cEEEEcChHHHHHHHHHhccC
Confidence 79999998 9999999999988876 999999 654 4544333221 111 011110100 00 00110
Q ss_pred EEEEEe-ecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEE
Q 029791 75 PVTVFG-VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (188)
Q Consensus 75 ~i~v~~-~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkvii 123 (188)
.+.++. ..+..++- ... +|+|+++++.+...+-+...+++|. .|+.
T Consensus 76 ~~~v~~g~~~~~el~-~~~-iDvVV~ai~G~aGl~ptlaAi~aGK-~Vvl 122 (388)
T 1r0k_A 76 SVEAAAGADALVEAA-MMG-ADWTMAAIIGCAGLKATLAAIRKGK-TVAL 122 (388)
T ss_dssp SSEEEESHHHHHHHH-TSC-CSEEEECCCSGGGHHHHHHHHHTTS-EEEE
T ss_pred CcEEEeCccHHHHHH-cCC-CCEEEEeCCCHHHHHHHHHHHHCCC-EEEE
Confidence 112221 11111111 123 8999999955667777778889985 4444
No 112
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.88 E-value=0.00077 Score=54.28 Aligned_cols=96 Identities=18% Similarity=0.309 Sum_probs=62.6
Q ss_pred ccEEEEEccChHHHHHHHHHH-cCCCceEEEEecCCCchh-hhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEe
Q 029791 3 KVKIGINGFGRIGRLVARVIL-QRDDVELVAVNDPFITTD-YMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~-~~~~~~ivaInd~~~~~~-~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
+.|++|+|.|.+|+.+++.+. +..+++++|+-|. +++ . .|+. .++|.+ |+.
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~--dp~~k----------iG~~-------------~i~Gvp--V~~ 136 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDL--DSNDL----------VGKT-------------TEDGIP--VYG 136 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEEC--TTSTT----------TTCB-------------CTTCCB--EEE
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeC--Cchhc----------cCce-------------eECCeE--EeC
Confidence 368999999999999988742 3457999999987 332 2 1210 022222 222
Q ss_pred ecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
-.+.+++ -.+.++|+++-|++.....+.+....++|.|.++--+|
T Consensus 137 ~~dL~~~-v~~~~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~nFap 181 (212)
T 3keo_A 137 ISTINDH-LIDSDIETAILTVPSTEAQEVADILVKAGIKGILSFSP 181 (212)
T ss_dssp GGGHHHH-C-CCSCCEEEECSCGGGHHHHHHHHHHHTCCEEEECSS
T ss_pred HHHHHHH-HHHcCCCEEEEecCchhHHHHHHHHHHcCCCEEEEcCC
Confidence 1222211 12358999999999887777778888899987555555
No 113
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=96.78 E-value=0.0097 Score=50.02 Aligned_cols=91 Identities=16% Similarity=0.188 Sum_probs=54.5
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCc--eEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEe
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDV--ELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~--~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
.+||+|+|+|.||..+++.+...+ . ++++ .|. +.+.+..+.++ |. + . ..
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G-~~~~V~~-~dr--~~~~~~~a~~~----G~-----~-----~---------~~-- 83 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSG-FKGKIYG-YDI--NPESISKAVDL----GI-----I-----D---------EG-- 83 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTT-CCSEEEE-ECS--CHHHHHHHHHT----TS-----C-----S---------EE--
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCC-CCCEEEE-EEC--CHHHHHHHHHC----CC-----c-----c---------hh--
Confidence 479999999999999999998764 4 5544 565 34444333221 10 0 0 01
Q ss_pred ecCCCC-CCcccCCccEEEeecCcccCHHhHH---HHHhCCCcEEEEeCCC
Q 029791 81 VRNPEE-IPWAETGAEYVVESTGVFTDKDKAA---AHLKGGAKKVIISAPS 127 (188)
Q Consensus 81 ~~~p~~-~~w~~~~vdiV~e~tg~~~~~~~~~---~h~~~Gakkviis~ps 127 (188)
..++++ . -.+.|+||.|++.....+... .+++.|+ +|++..|
T Consensus 84 ~~~~~~~~---~~~aDvVilavp~~~~~~vl~~l~~~l~~~~--iv~d~~S 129 (314)
T 3ggo_A 84 TTSIAKVE---DFSPDFVMLSSPVRTFREIAKKLSYILSEDA--TVTDQGS 129 (314)
T ss_dssp ESCTTGGG---GGCCSEEEECSCGGGHHHHHHHHHHHSCTTC--EEEECCS
T ss_pred cCCHHHHh---hccCCEEEEeCCHHHHHHHHHHHhhccCCCc--EEEECCC
Confidence 123333 1 136899999999876554333 3455666 7776554
No 114
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=96.73 E-value=0.0054 Score=53.04 Aligned_cols=135 Identities=16% Similarity=0.216 Sum_probs=82.0
Q ss_pred ccEEEEEccChHHHHHHHHHHcCC-CceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEee
Q 029791 3 KVKIGINGFGRIGRLVARVILQRD-DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~-~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
++||||+|+| +|+.+++++...+ ++++++|.|+. .+....+.+ .|| + ..+
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~--~~~a~~~a~---~~g--------------v-------~~~-- 57 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQG--SARSRELAH---AFG--------------I-------PLY-- 57 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCS--SHHHHHHHH---HTT--------------C-------CEE--
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCC--HHHHHHHHH---HhC--------------C-------CEE--
Confidence 5899999999 7999999887765 69999999984 332211111 011 0 011
Q ss_pred cCCCCCCcccCCccEEEeecCcccC----HHhHHHHHhCCCcEEEEeCCC--------------CCCCeEEeecCccCCC
Q 029791 82 RNPEEIPWAETGAEYVVESTGVFTD----KDKAAAHLKGGAKKVIISAPS--------------KDAPMFVVGVNENEYK 143 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~----~~~~~~h~~~Gakkviis~ps--------------~d~p~~V~gvN~~~~~ 143 (188)
.|.+++. .++|+|+=||+.... .+.+...+++|.- |++--|- .+.. +..|-|+..+.
T Consensus 58 ~~~~~l~---~~~D~v~i~~p~~~h~~~~~~~a~~al~aGkh-Vl~EKPl~~~ea~~l~~~A~~~g~~-~~v~~~yr~~p 132 (372)
T 4gmf_A 58 TSPEQIT---GMPDIACIVVRSTVAGGAGTQLARHFLARGVH-VIQEHPLHPDDISSLQTLAQEQGCC-YWINTFYPHTR 132 (372)
T ss_dssp SSGGGCC---SCCSEEEECCC--CTTSHHHHHHHHHHHTTCE-EEEESCCCHHHHHHHHHHHHHHTCC-EEEECSGGGSH
T ss_pred CCHHHHh---cCCCEEEEECCCcccchhHHHHHHHHHHcCCc-EEEecCCCHHHHHHHHHHHHHcCCE-EEEcCcccCCH
Confidence 2233332 257888889988776 6778889999973 6776662 1233 33354443221
Q ss_pred C-----------------CCceEEcCChhhHhHHHHHHHHHhhcCc
Q 029791 144 P-----------------ELNIVSNASCTTNCLAPLAKVIHDKFGI 172 (188)
Q Consensus 144 ~-----------------~~~iis~~sCtT~~lap~l~~l~~~~gI 172 (188)
. ....| .++|+..-+-|.+..|....|.
T Consensus 133 ~vr~~i~~~~~l~~~~~~~~~~i-~~~~s~q~~y~~~dil~~alg~ 177 (372)
T 4gmf_A 133 AGRTWLRDAQQLRRCLAKTPPVV-HATTSRQLLYSTLDLLLLALGV 177 (372)
T ss_dssp HHHHHHHHHHHHHHHHTSCCSEE-EEEECTTTHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhhccCCceEE-EEEeccccccchHHHHHHhcCC
Confidence 0 11222 3467788888888888776664
No 115
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=96.42 E-value=0.0014 Score=56.05 Aligned_cols=93 Identities=19% Similarity=0.217 Sum_probs=56.9
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeec
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
+|||.|+|.|.+|+.+++.+.+..++. +.|. +.+.+..+.+ +. .. +.++ ..
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~~~v~---~~~~--~~~~~~~~~~-------~~-~~--------~~~d--------~~ 66 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDEFDVY---IGDV--NNENLEKVKE-------FA-TP--------LKVD--------AS 66 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTTSEEE---EEES--CHHHHHHHTT-------TS-EE--------EECC--------TT
T ss_pred ccEEEEECCCHHHHHHHHHHhcCCCeE---EEEc--CHHHHHHHhc-------cC-Cc--------EEEe--------cC
Confidence 579999999999999999887654444 3343 2333322210 01 11 1111 11
Q ss_pred CCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
|++.+.=--.++|+|+.|+|.+...+-++..+++|+ -+++.+
T Consensus 67 d~~~l~~~~~~~DvVi~~~p~~~~~~v~~~~~~~g~--~yvD~s 108 (365)
T 3abi_A 67 NFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKV--DMVDVS 108 (365)
T ss_dssp CHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTC--EEEECC
T ss_pred CHHHHHHHHhCCCEEEEecCCcccchHHHHHHhcCc--ceEeee
Confidence 222111111378999999999988888889999998 466654
No 116
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=96.37 E-value=0.0073 Score=50.34 Aligned_cols=87 Identities=24% Similarity=0.214 Sum_probs=58.7
Q ss_pred ccEEEEEcc-ChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEee
Q 029791 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~kvgI~G~-GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
++||+|+|+ |++|+.+++.+.+. ++++++..+|.. . +. . +.|.+ ++
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~-g~~~V~~V~p~~-~------------------g~-------~--~~G~~--vy-- 53 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGK-G------------------GT-------T--HLGLP--VF-- 53 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTC-T------------------TC-------E--ETTEE--EE--
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCCc-c------------------cc-------e--eCCee--cc--
Confidence 579999997 99999999998876 588887777620 0 00 0 11211 21
Q ss_pred cCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEE
Q 029791 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkvii 123 (188)
.+.++++- +.++|+|+.|++.....+.+...+++|.+.+|+
T Consensus 54 ~sl~el~~-~~~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi 94 (288)
T 2nu8_A 54 NTVREAVA-ATGATASVIYVPAPFCKDSILEAIDAGIKLIIT 94 (288)
T ss_dssp SSHHHHHH-HHCCCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 12222221 126899999999998888888899999986444
No 117
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=96.35 E-value=0.02 Score=42.54 Aligned_cols=85 Identities=22% Similarity=0.339 Sum_probs=57.0
Q ss_pred ccEEEEEcc----ChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEE
Q 029791 3 KVKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 3 ~~kvgI~G~----GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
..+|+|+|. |++|+.+++.+.+. ++++..+| |. .+ + +.|.+ +
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~-G~~V~~vn-p~--~~------------------~----------i~G~~--~ 59 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSK-GFEVLPVN-PN--YD------------------E----------IEGLK--C 59 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHT-TCEEEEEC-TT--CS------------------E----------ETTEE--C
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHC-CCEEEEeC-CC--CC------------------e----------ECCee--e
Confidence 468999999 99999999999876 47765554 21 00 0 12222 1
Q ss_pred EeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
+ .++++++ ..+|+|+-|++.....+-....+++|++.+++..+
T Consensus 60 ~--~s~~el~---~~vDlvii~vp~~~v~~v~~~~~~~g~~~i~~~~~ 102 (138)
T 1y81_A 60 Y--RSVRELP---KDVDVIVFVVPPKVGLQVAKEAVEAGFKKLWFQPG 102 (138)
T ss_dssp B--SSGGGSC---TTCCEEEECSCHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred c--CCHHHhC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCc
Confidence 1 3455554 26899999999765556666667789988777654
No 118
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=96.28 E-value=0.0038 Score=53.79 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=31.2
Q ss_pred CccEEEEEccChHHHHHHHHHHcCC---CceEEEEecC
Q 029791 2 GKVKIGINGFGRIGRLVARVILQRD---DVELVAVNDP 36 (188)
Q Consensus 2 ~~~kvgI~G~GriGr~~~r~~~~~~---~~~ivaInd~ 36 (188)
+++||||+|+|.||+.+++.+.+.+ ++++++|.|.
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~ 40 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA 40 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred ceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 4589999999999999999998765 6999999995
No 119
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=96.15 E-value=0.016 Score=50.28 Aligned_cols=111 Identities=15% Similarity=0.202 Sum_probs=62.9
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhh-cccccCcCCCcceEEeCCCee--EECCEEE
Q 029791 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFK-YDSVHGQWKHHELKVKDDKTL--LFGEKPV 76 (188)
Q Consensus 1 m~~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~-yDS~~g~~~~~~v~~~~~~~l--~i~g~~i 76 (188)
|.+.||+|.| +|.||+..++.+...++++++++.-- .+.+.+....+ |.. ..+...+.... .+.. .
T Consensus 1 M~~k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a~-~n~~~l~~q~~~f~p-------~~v~v~~~~~~~~~l~~-~- 70 (376)
T 3a06_A 1 MEERTLVILGATGSIGTQTLDVLKKVKGIRLIGISFH-SNLELAFKIVKEFNV-------KNVAITGDVEFEDSSIN-V- 70 (376)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEES-SCHHHHHHHHHHHTC-------CEEEECSSCCCCCSSSE-E-
T ss_pred CCcceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEcc-CCHHHHHHHHHHcCC-------CEEEEccHHHHHHHHHH-H-
Confidence 5447899999 69999999998887677999999432 25555544432 322 11111111000 0000 0
Q ss_pred EEEeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEe
Q 029791 77 TVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIIS 124 (188)
Q Consensus 77 ~v~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis 124 (188)
+..+....++- ...++|+|+.++..+...+-.-..+++|. ++.+.
T Consensus 71 -~~G~~~l~el~-~~~~~D~Vv~AivG~aGL~ptlaAi~aGK-~vaLA 115 (376)
T 3a06_A 71 -WKGSHSIEEML-EALKPDITMVAVSGFSGLRAVLASLEHSK-RVCLA 115 (376)
T ss_dssp -EESTTHHHHHH-HHHCCSEEEECCCSTTHHHHHHHHHHHCS-EEEEC
T ss_pred -ccCHHHHHHHh-cCCCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEe
Confidence 11100001110 11268999999999988888878888884 55553
No 120
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=96.01 E-value=0.0059 Score=48.38 Aligned_cols=35 Identities=20% Similarity=0.270 Sum_probs=29.3
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
|+++||+|+|+|.+|+.+++.+.+. +.+++.+.|.
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~-g~~V~~v~~r 55 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAA-QIPAIIANSR 55 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHT-TCCEEEECTT
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEECC
Confidence 4457999999999999999998876 4788776776
No 121
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=95.97 E-value=0.028 Score=45.23 Aligned_cols=32 Identities=19% Similarity=0.351 Sum_probs=27.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
+||+|+|+|++|+.+++.+... +.++|.+.|.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~~ 42 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK-GFRIVQVYSR 42 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-TCCEEEEECS
T ss_pred CeEEEEcCCHHHHHHHHHHHHC-CCeEEEEEeC
Confidence 6999999999999999988765 4777778876
No 122
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.69 E-value=0.11 Score=41.70 Aligned_cols=32 Identities=13% Similarity=0.248 Sum_probs=27.7
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEec
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
++||.|.|.|.||+.+++.+.+. +.+++++.-
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r 36 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQ-GWRIIGTSR 36 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGG-TCEEEEEES
T ss_pred cCcEEEECCcHHHHHHHHHHHHC-CCEEEEEEc
Confidence 47999999999999999999877 478888864
No 123
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=95.48 E-value=0.087 Score=47.00 Aligned_cols=103 Identities=17% Similarity=0.263 Sum_probs=67.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCC--------Cchhhhhhhhhccccc-CcCCCcceEEeCCCeeEECCE
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF--------ITTDYMTYMFKYDSVH-GQWKHHELKVKDDKTLLFGEK 74 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~--------~~~~~~~~l~~yDS~~-g~~~~~~v~~~~~~~l~i~g~ 74 (188)
.+|+|-|||.+|...++.+.+. +..+|+|.|.. .+.+.+..|+++-..+ |+.. . +.+. + -+.+
T Consensus 253 ~~vaVqG~GnVG~~~a~~L~~~-GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~-~---~~~~--~-~~a~ 324 (470)
T 2bma_A 253 QTAVVSGSGNVALYCVQKLLHL-NVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIK-E---YLNH--S-STAK 324 (470)
T ss_dssp CEEEEECSSHHHHHHHHHHHHT-TCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGG-G---GGGT--C-SSCE
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHH-H---HHhh--c-CCcE
Confidence 6899999999999999988876 59999999953 3556666666654322 2222 1 1000 0 0111
Q ss_pred EEEEEeecCCCCCCcccCCccEEEeec-CcccCHHhHHHHHhCCCcEEEE
Q 029791 75 PVTVFGVRNPEEIPWAETGAEYVVEST-GVFTDKDKAAAHLKGGAKKVII 123 (188)
Q Consensus 75 ~i~v~~~~~p~~~~w~~~~vdiV~e~t-g~~~~~~~~~~h~~~Gakkvii 123 (188)
.. +++++ | ..++|+.+-|+ +..++.+.+...++.+|| +|+
T Consensus 325 ---~v---~~~~~-~-~~~~DI~iPcA~~~~I~~~na~~l~~~~ak-~V~ 365 (470)
T 2bma_A 325 ---YF---PNEKP-W-GVPCTLAFPCATQNDVDLDQAKLLQKNGCI-LVG 365 (470)
T ss_dssp ---EC---SSCCT-T-SSCCSEEEECSSTTCBCSHHHHHHHHTTCC-EEE
T ss_pred ---Ee---cCcCe-e-ecCccEEEeccccCcCCHHHHHHHHhcCcE-EEE
Confidence 11 12333 7 46899999987 667788999988888896 445
No 124
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=95.27 E-value=0.07 Score=39.76 Aligned_cols=85 Identities=18% Similarity=0.173 Sum_probs=56.6
Q ss_pred cEEEEEcc----ChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEE
Q 029791 4 VKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 4 ~kvgI~G~----GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
.+|+|+|. |++|+.+++.+.+.+ +++..+| |. . . |+. +.|.+ +
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~G-~~v~~vn-p~--~--~----------------------g~~--i~G~~--~- 60 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQG-YHVIPVS-PK--V--A----------------------GKT--LLGQQ--G- 60 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHHT-CCEEEEC-SS--S--T----------------------TSE--ETTEE--C-
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHCC-CEEEEeC-Cc--c--c----------------------ccc--cCCee--c-
Confidence 57999999 899999999987664 6755554 21 0 0 011 12322 2
Q ss_pred eecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeC
Q 029791 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA 125 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ 125 (188)
-.++++++ ..+|+|+-|++.....+-....+++|+|.++++.
T Consensus 61 -~~sl~el~---~~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i~~ 102 (145)
T 2duw_A 61 -YATLADVP---EKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQL 102 (145)
T ss_dssp -CSSTTTCS---SCCSEEECCSCSTHHHHHHHHHHHHTCCEEECCT
T ss_pred -cCCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 14466665 3689999999976666666666778998887764
No 125
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=95.22 E-value=0.031 Score=45.48 Aligned_cols=34 Identities=21% Similarity=0.260 Sum_probs=27.3
Q ss_pred CC-ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 1 MG-KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~-~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
|+ +++|.|.| .|.+|+.+++.+.+.+ .+++++.-
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R 36 (313)
T 1qyd_A 1 MDKKSRVLIVGGTGYIGKRIVNASISLG-HPTYVLFR 36 (313)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCC-CcEEEEEC
Confidence 54 47899999 7999999999998874 77777754
No 126
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=95.17 E-value=0.084 Score=39.23 Aligned_cols=83 Identities=22% Similarity=0.232 Sum_probs=56.2
Q ss_pred cEEEEEcc----ChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEE
Q 029791 4 VKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 4 ~kvgI~G~----GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
.+|+|+|. |++|+.+++.+.+.+ +++..+| |. . +. +.|.+ ++
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~G-~~v~~Vn-p~--~---------~~-------------------i~G~~--~y 68 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEHG-YDVYPVN-PK--Y---------EE-------------------VLGRK--CY 68 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEEC-TT--C---------SE-------------------ETTEE--CB
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHCC-CEEEEEC-CC--C---------Ce-------------------ECCee--cc
Confidence 58999998 799999999888764 6766664 21 0 00 12222 11
Q ss_pred eecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeC
Q 029791 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA 125 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ 125 (188)
.++++++ ..+|+|+-+++.....+.+...+++|+|.++++.
T Consensus 69 --~sl~~l~---~~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~~~ 109 (144)
T 2d59_A 69 --PSVLDIP---DKIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQY 109 (144)
T ss_dssp --SSGGGCS---SCCSEEEECSCHHHHHHHHHHHHHHTCSEEEECT
T ss_pred --CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEECC
Confidence 3344554 2689999999987666777777788999877753
No 127
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=95.14 E-value=0.018 Score=47.97 Aligned_cols=35 Identities=29% Similarity=0.340 Sum_probs=27.0
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEecC
Q 029791 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 1 m~~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
|+++||.|.| .|.||+.+++.+.+.+ .+++++.-.
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~ 43 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAH-RPTYILARP 43 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECC
Confidence 3346899999 6999999999998875 777777653
No 128
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=94.93 E-value=0.067 Score=39.67 Aligned_cols=86 Identities=13% Similarity=0.098 Sum_probs=57.4
Q ss_pred cEEEEEcc----ChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEE
Q 029791 4 VKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 4 ~kvgI~G~----GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
.+|+|+|. |++|+.+++.+.+.. +++..+| | +.. ++ . +.|.+ ++
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~G-~~v~~vn-p----~~~-----~~-----------------~--i~G~~--~~ 61 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQG-YRVLPVN-P----RFQ-----GE-----------------E--LFGEE--AV 61 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTT-CEEEEEC-G----GGT-----TS-----------------E--ETTEE--CB
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHCC-CEEEEeC-C----Ccc-----cC-----------------c--CCCEE--ec
Confidence 58999998 899999999988764 7766554 2 110 01 1 12322 11
Q ss_pred eecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
.+.++++ ..+|+++-+++.....+.+....+.|+|.++++.+
T Consensus 62 --~sl~el~---~~vDlavi~vp~~~~~~v~~~~~~~gi~~i~~~~g 103 (140)
T 1iuk_A 62 --ASLLDLK---EPVDILDVFRPPSALMDHLPEVLALRPGLVWLQSG 103 (140)
T ss_dssp --SSGGGCC---SCCSEEEECSCHHHHTTTHHHHHHHCCSCEEECTT
T ss_pred --CCHHHCC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 3344554 26899999999866666677777889998888754
No 129
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=94.87 E-value=0.054 Score=45.07 Aligned_cols=87 Identities=16% Similarity=0.207 Sum_probs=57.5
Q ss_pred ccEEEEEcc-ChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEee
Q 029791 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~kvgI~G~-GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
..||+|+|+ |+.|+.+++.+.+. ++++++..+|... ++. +.|.+ ++
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~-g~~~v~~VnP~~~--------------------------g~~--i~G~~--vy-- 53 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTY-GTKIVAGVTPGKG--------------------------GME--VLGVP--VY-- 53 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCT--------------------------TCE--ETTEE--EE--
T ss_pred CCEEEEECCCCCHHHHHHHHHHHc-CCeEEEEECCCCC--------------------------Cce--ECCEE--ee--
Confidence 479999996 99999999988775 5887755555200 000 22222 21
Q ss_pred cCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEE
Q 029791 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkvii 123 (188)
.+.++++- +.++|+++.+++.....+.+...+++|++.+|+
T Consensus 54 ~sl~el~~-~~~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi 94 (288)
T 1oi7_A 54 DTVKEAVA-HHEVDASIIFVPAPAAADAALEAAHAGIPLIVL 94 (288)
T ss_dssp SSHHHHHH-HSCCSEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 12222221 126899999999888888888888999985554
No 130
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=94.56 E-value=0.029 Score=45.80 Aligned_cols=35 Identities=29% Similarity=0.318 Sum_probs=26.9
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCC-CceEEEEecC
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRD-DVELVAVNDP 36 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~-~~~ivaInd~ 36 (188)
|+++||+|+|+|.+|+.+++.+...+ +.+++ +.|.
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~-~~d~ 39 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDHPHYKIV-GYNR 39 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHCTTSEEE-EECS
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCCCCcEEE-EEcC
Confidence 54579999999999999999887653 46654 4555
No 131
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=94.53 E-value=0.044 Score=44.13 Aligned_cols=32 Identities=13% Similarity=0.181 Sum_probs=26.9
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
|||.|.| .|.||+.+++.+.+.++.+++++..
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R 33 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVR 33 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEES
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEEC
Confidence 3799999 7999999999988765688888765
No 132
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=94.44 E-value=0.076 Score=41.75 Aligned_cols=35 Identities=17% Similarity=0.171 Sum_probs=27.6
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
|++++|-|.| .|.||+.+++.+.+.+..+++++.-
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R 56 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFAR 56 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEES
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEc
Confidence 4457899999 7999999999998775477776653
No 133
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=94.44 E-value=0.02 Score=49.77 Aligned_cols=97 Identities=18% Similarity=0.194 Sum_probs=56.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEecCCCchhhhhhhhh-cccccCcCCCcceEEeCCCeeEECCEEEEEEee
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDPFITTDYMTYMFK-YDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~-~ivaInd~~~~~~~~~~l~~-yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
+||+|+|.|.||+.+++.+.+.+++ ..+.+.|. +.+....+.+ +.... . ..+.. +.++ .
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r--~~~~~~~la~~l~~~~---~-~~~~~-----~~~D--------~ 62 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASR--TLSKCQEIAQSIKAKG---Y-GEIDI-----TTVD--------A 62 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEES--CHHHHHHHHHHHHHTT---C-CCCEE-----EECC--------T
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEEC--CHHHHHHHHHHhhhhc---C-CceEE-----EEec--------C
Confidence 5999999999999999999988765 45666665 3333222211 11000 0 00100 0000 0
Q ss_pred cCCCCCC--cccCCccEEEeecCcccCHHhHHHHHhCCCc
Q 029791 82 RNPEEIP--WAETGAEYVVESTGVFTDKDKAAAHLKGGAK 119 (188)
Q Consensus 82 ~~p~~~~--w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gak 119 (188)
.+++++. ..+.++|+|+.|+|.+.....+...+++|++
T Consensus 63 ~d~~~l~~~l~~~~~DvVin~ag~~~~~~v~~a~l~~g~~ 102 (405)
T 4ina_A 63 DSIEELVALINEVKPQIVLNIALPYQDLTIMEACLRTGVP 102 (405)
T ss_dssp TCHHHHHHHHHHHCCSEEEECSCGGGHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHhhCCCEEEECCCcccChHHHHHHHHhCCC
Confidence 1111110 1111479999999998877777888888985
No 134
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=94.40 E-value=0.049 Score=44.15 Aligned_cols=34 Identities=32% Similarity=0.408 Sum_probs=26.9
Q ss_pred CC-ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 1 MG-KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~-~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
|. +++|.|.| .|.+|+.+++.+.+.+ .+++++.-
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R 36 (308)
T 1qyc_A 1 MGSRSRILLIGATGYIGRHVAKASLDLG-HPTFLLVR 36 (308)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCC-CCEEEEEC
Confidence 54 57899999 6999999999998875 67776643
No 135
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=94.17 E-value=0.12 Score=39.79 Aligned_cols=30 Identities=30% Similarity=0.424 Sum_probs=25.9
Q ss_pred EEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 5 KIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 5 kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
||.|.| .|.||+.+++.+.+.+ .+++++.-
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g-~~V~~~~R 32 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTD-YQIYAGAR 32 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSS-CEEEEEES
T ss_pred eEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 899999 8999999999998764 78888764
No 136
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.14 E-value=0.062 Score=39.62 Aligned_cols=34 Identities=12% Similarity=0.091 Sum_probs=28.7
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEec
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
|...+|.|.|+|++|+.+++.+.+. +.+++.|..
T Consensus 1 ~~~~~vlI~G~G~vG~~la~~L~~~-g~~V~vid~ 34 (153)
T 1id1_A 1 HRKDHFIVCGHSILAINTILQLNQR-GQNVTVISN 34 (153)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHC-CCCEEEEEC
Confidence 6667999999999999999999876 478887754
No 137
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=94.06 E-value=0.11 Score=42.10 Aligned_cols=32 Identities=38% Similarity=0.557 Sum_probs=26.3
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
+|.+|+| .||+||.+.+.+ +.+++++++.-|.
T Consensus 13 ~~~~v~Ga~GrMG~~i~~~~-~~~~~elv~~id~ 45 (228)
T 1vm6_A 13 MKYGIVGYSGRMGQEIQKVF-SEKGHELVLKVDV 45 (228)
T ss_dssp CEEEEETTTSHHHHHHHHHH-HHTTCEEEEEEET
T ss_pred ceeEEEEecCHHHHHHHHHH-hCCCCEEEEEEcC
Confidence 6999999 599999998765 5567999988764
No 138
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.95 E-value=0.13 Score=39.79 Aligned_cols=32 Identities=31% Similarity=0.340 Sum_probs=27.0
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
++||.|.| .|.||+.+++.+.+.+ .+++++.-
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r 36 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRG-FEVTAVVR 36 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTT-CEEEEECS
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEc
Confidence 36999999 7999999999998875 78777754
No 139
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=93.89 E-value=0.058 Score=44.34 Aligned_cols=35 Identities=17% Similarity=0.276 Sum_probs=26.6
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCc--eEEEEecC
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDV--ELVAVNDP 36 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~--~ivaInd~ 36 (188)
|+++||+|+|+|.+|+.+++.+.... + +-|.+.|+
T Consensus 1 M~~~~I~iIG~G~mG~aia~~l~~~g-~~~~~V~v~dr 37 (280)
T 3tri_A 1 MNTSNITFIGGGNMARNIVVGLIANG-YDPNRICVTNR 37 (280)
T ss_dssp -CCSCEEEESCSHHHHHHHHHHHHTT-CCGGGEEEECS
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCC-CCCCeEEEEeC
Confidence 66689999999999999999988764 3 22445565
No 140
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=93.79 E-value=0.018 Score=47.14 Aligned_cols=33 Identities=18% Similarity=0.316 Sum_probs=22.3
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
|| +||||+|+|++|+.+++.+... ++++.+.|.
T Consensus 1 M~-m~I~iIG~G~mG~~la~~l~~~--~~v~~v~~~ 33 (276)
T 2i76_A 1 MS-LVLNFVGTGTLTRFFLECLKDR--YEIGYILSR 33 (276)
T ss_dssp ----CCEEESCCHHHHHHHHTTC------CCCEECS
T ss_pred CC-ceEEEEeCCHHHHHHHHHHHHc--CcEEEEEeC
Confidence 54 7999999999999998887654 666567776
No 141
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=93.73 E-value=0.066 Score=43.59 Aligned_cols=33 Identities=21% Similarity=0.397 Sum_probs=24.9
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
|+++||+|+|.|.+|..+++.+.+.. .+++.++
T Consensus 1 ~~~m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~ 33 (316)
T 2ew2_A 1 SNAMKIAIAGAGAMGSRLGIMLHQGG-NDVTLID 33 (316)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CCCCeEEEECcCHHHHHHHHHHHhCC-CcEEEEE
Confidence 34579999999999999999888764 6766553
No 142
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.71 E-value=0.051 Score=45.82 Aligned_cols=36 Identities=36% Similarity=0.478 Sum_probs=27.7
Q ss_pred CC-ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCC
Q 029791 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 1 m~-~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~ 37 (188)
|+ ++||+|+|.|.+|..++..+...+.++ +.+.|..
T Consensus 1 m~~~~kI~VIGaG~vG~~ia~~la~~g~~~-v~L~Di~ 37 (322)
T 1t2d_A 1 MAPKAKIVLVGSGMIGGVMATLIVQKNLGD-VVLFDIV 37 (322)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEeCC
Confidence 54 469999999999999888887765447 7777764
No 143
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.69 E-value=0.074 Score=38.42 Aligned_cols=31 Identities=16% Similarity=0.154 Sum_probs=26.3
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
.+|.|.|+|++|+.+++.+.+. +.+++.+..
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~-g~~V~~id~ 37 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA-GKKVLAVDK 37 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEEEC
Confidence 5899999999999999999876 478777754
No 144
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=93.66 E-value=0.46 Score=36.90 Aligned_cols=32 Identities=19% Similarity=0.322 Sum_probs=27.0
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
.+||-|.| .|.||+.+++.+.+.+ .+++++.-
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G-~~V~~~~R 53 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKG-HEPVAMVR 53 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCeEEEECCCChHHHHHHHHHHhCC-CeEEEEEC
Confidence 47999999 6999999999998874 78877764
No 145
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=93.63 E-value=0.052 Score=43.44 Aligned_cols=26 Identities=31% Similarity=0.639 Sum_probs=22.3
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCC
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRD 26 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~ 26 (188)
|+++||+|+|+|.+|..+++.+.+..
T Consensus 2 m~~m~i~iiG~G~mG~~~a~~l~~~g 27 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGSALAHGIANAN 27 (262)
T ss_dssp CSSSCEEEECCSHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCC
Confidence 65679999999999999999887653
No 146
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=93.61 E-value=0.34 Score=42.81 Aligned_cols=34 Identities=32% Similarity=0.598 Sum_probs=30.1
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~ 37 (188)
..+|+|.|||-+|+..++.+.+. +..+|+|.|..
T Consensus 235 g~~vaVqGfGnVG~~~a~~L~e~-GakvVavsD~~ 268 (440)
T 3aog_A 235 GARVAIQGFGNVGNAAARAFHDH-GARVVAVQDHT 268 (440)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEECSS
T ss_pred CCEEEEeccCHHHHHHHHHHHHC-CCEEEEEEcCC
Confidence 36899999999999999988876 59999999974
No 147
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=93.55 E-value=0.073 Score=45.54 Aligned_cols=30 Identities=33% Similarity=0.479 Sum_probs=25.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~-G~~V~~~d 203 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGF-GLAIHYHN 203 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTT-TCEEEEEC
T ss_pred CEEEEEEeChhHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998865 58877654
No 148
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=93.53 E-value=0.28 Score=43.56 Aligned_cols=103 Identities=14% Similarity=0.263 Sum_probs=64.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCC--------CchhhhhhhhhcccccC-cCCCcceEEeCCCeeEECCE
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF--------ITTDYMTYMFKYDSVHG-QWKHHELKVKDDKTLLFGEK 74 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~--------~~~~~~~~l~~yDS~~g-~~~~~~v~~~~~~~l~i~g~ 74 (188)
.+|+|-|||.+|...++.+.+. +..+|+|.|.. .+.+.+..+.++...++ +.. ... .+ ..+.+
T Consensus 240 ~~VaVQG~GnVG~~aa~~L~e~-GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~-~~~---~~---~~~a~ 311 (456)
T 3r3j_A 240 KKCLVSGSGNVAQYLVEKLIEK-GAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLK-EYL---KY---SKTAK 311 (456)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-TCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGG-GGG---GT---CSSCE
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchh-hhh---hc---CCCce
Confidence 5899999999999999988765 58899998854 24556655544433221 111 000 00 00112
Q ss_pred EEEEEeecCCCCCCcccCCccEEEee-cCcccCHHhHHHHHhCCCcEEEE
Q 029791 75 PVTVFGVRNPEEIPWAETGAEYVVES-TGVFTDKDKAAAHLKGGAKKVII 123 (188)
Q Consensus 75 ~i~v~~~~~p~~~~w~~~~vdiV~e~-tg~~~~~~~~~~h~~~Gakkvii 123 (188)
.+ +++++ |. .++|+.+=| ++.-++.+.++.-.+.+|| +|+
T Consensus 312 ~v------~~~~i-~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak-~V~ 352 (456)
T 3r3j_A 312 YF------ENQKP-WN-IPCDIAFPCATQNEINENDADLFIQNKCK-MIV 352 (456)
T ss_dssp EE------CSCCG-GG-SCCSEEEECSCTTCBCHHHHHHHHHHTCC-EEE
T ss_pred Ee------CCccc-cc-cCccEEEeCCCccchhhHHHHHHHhcCCe-EEE
Confidence 11 13332 75 589999987 5677888888877667885 445
No 149
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=93.49 E-value=0.081 Score=44.82 Aligned_cols=31 Identities=26% Similarity=0.375 Sum_probs=26.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
.+|||+|+|+||+.+++.+... ++++++.+-
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~-G~~V~~~dr 168 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASAL-GMHVIGVNT 168 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CeEEEECcCHHHHHHHHHHHhC-CCEEEEECC
Confidence 5899999999999999998866 588887753
No 150
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=93.47 E-value=0.074 Score=45.18 Aligned_cols=30 Identities=30% Similarity=0.475 Sum_probs=25.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~-G~~V~~~d 171 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAF-GMKVLCYD 171 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred ceEEEECcCHHHHHHHHHHHHC-cCEEEEEC
Confidence 5899999999999999998866 48876654
No 151
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=93.46 E-value=0.071 Score=44.97 Aligned_cols=31 Identities=26% Similarity=0.347 Sum_probs=26.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
.+|||+|+|+||+.+++.+... ++++++.+.
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~-G~~V~~~dr 170 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAW-GFPLRCWSR 170 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-TCCEEEEES
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEEEcC
Confidence 6899999999999999998766 588887754
No 152
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=93.45 E-value=0.25 Score=35.88 Aligned_cols=83 Identities=18% Similarity=0.107 Sum_probs=59.8
Q ss_pred cEEEEEcc----ChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEE
Q 029791 4 VKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 4 ~kvgI~G~----GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
.+|+|+|. ++.|..+++.+.+.+ +++..||-. ++. +.|.+.
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g-~~V~pVnP~------------~~~-------------------i~G~~~--- 49 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHG-HEFIPVGRK------------KGE-------------------VLGKTI--- 49 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHT-CCEEEESSS------------CSE-------------------ETTEEC---
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCC-CeEEEECCC------------CCc-------------------CCCeec---
Confidence 47999995 789999999998764 688888732 111 222221
Q ss_pred eecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
-.+.+++| . +|+|+-+++.....+..+...+.|+|.|+++..
T Consensus 50 -y~sl~dlp---~-vDlavi~~p~~~v~~~v~e~~~~g~k~v~~~~G 91 (122)
T 3ff4_A 50 -INERPVIE---G-VDTVTLYINPQNQLSEYNYILSLKPKRVIFNPG 91 (122)
T ss_dssp -BCSCCCCT---T-CCEEEECSCHHHHGGGHHHHHHHCCSEEEECTT
T ss_pred -cCChHHCC---C-CCEEEEEeCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 14456666 3 899999999887778888888899998777644
No 153
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=93.42 E-value=0.077 Score=45.44 Aligned_cols=39 Identities=26% Similarity=0.414 Sum_probs=29.2
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhh
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTY 45 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~ 45 (188)
++||||+|+|.+|+.+++.+.+.. .+++.. |. +.+....
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G-~~V~v~-dr--~~~~~~~ 60 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGG-HECVVY-DL--NVNAVQA 60 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS--CHHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHhCC-CEEEEE-eC--CHHHHHH
Confidence 479999999999999999998774 676544 55 3444433
No 154
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=93.36 E-value=0.08 Score=44.90 Aligned_cols=30 Identities=23% Similarity=0.305 Sum_probs=26.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~d 170 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHF-GMKVLGVS 170 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred ceEEEEEECHHHHHHHHHHHhC-CCEEEEEc
Confidence 5899999999999999999776 58887765
No 155
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=93.32 E-value=0.084 Score=43.98 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=25.5
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 2 ~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
+++||+|+|+|.+|..+++.+.... .+++.+ |.
T Consensus 3 ~~mki~iiG~G~~G~~~a~~L~~~g-~~V~~~-~r 35 (359)
T 1bg6_A 3 ESKTYAVLGLGNGGHAFAAYLALKG-QSVLAW-DI 35 (359)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCC-CEEEEE-eC
Confidence 3579999999999999999887653 675544 44
No 156
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=93.29 E-value=0.16 Score=42.30 Aligned_cols=89 Identities=21% Similarity=0.260 Sum_probs=57.4
Q ss_pred ccEEEEEcc-ChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEee
Q 029791 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~kvgI~G~-GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
+.|++|.|. |+.|+.+++.+.+. ++++++-.+|... ++. +.|.+ ++
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~~-g~~~V~~VnP~~~--------------------------g~~--i~G~~--vy-- 59 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLEC-GTKIVGGVTPGKG--------------------------GQN--VHGVP--VF-- 59 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHHT-TCCEEEEECTTCT--------------------------TCE--ETTEE--EE--
T ss_pred CCEEEEECCCCCHHHHHHHHHHhC-CCeEEEEeCCCCC--------------------------Cce--ECCEe--ee--
Confidence 368999996 99999999998876 5776654445200 000 12222 22
Q ss_pred cCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEE-eC
Q 029791 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII-SA 125 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkvii-s~ 125 (188)
.+.++++- +.++|+++.+++.....+.+...+++|++.+|+ +.
T Consensus 60 ~sl~el~~-~~~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi~t~ 103 (294)
T 2yv1_A 60 DTVKEAVK-ETDANASVIFVPAPFAKDAVFEAIDAGIELIVVITE 103 (294)
T ss_dssp SSHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred CCHHHHhh-cCCCCEEEEccCHHHHHHHHHHHHHCCCCEEEEECC
Confidence 22222221 126899999999888888888888999985554 44
No 157
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.26 E-value=0.1 Score=38.03 Aligned_cols=32 Identities=28% Similarity=0.560 Sum_probs=27.0
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEec
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
+.+|.|.|+|++|+.+++.+.+. +.+++.|..
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~-g~~v~vid~ 38 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS-DIPLVVIET 38 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-TCCEEEEES
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEEC
Confidence 36899999999999999999876 478888864
No 158
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=93.22 E-value=0.13 Score=41.12 Aligned_cols=31 Identities=26% Similarity=0.490 Sum_probs=25.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
+||+|+|+|.+|+.+++.+...+ .+ |.+.|.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g-~~-v~~~~~ 34 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTP-HE-LIISGS 34 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSS-CE-EEEECS
T ss_pred cEEEEECCCHHHHHHHHHHHhCC-Ce-EEEECC
Confidence 69999999999999999887664 44 567776
No 159
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=93.16 E-value=0.085 Score=44.14 Aligned_cols=30 Identities=20% Similarity=0.455 Sum_probs=25.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~-G~~V~~~d 154 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAAL-GAQVRGFS 154 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHC-CCEEEEEC
Confidence 6899999999999999998766 47876654
No 160
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=93.15 E-value=0.089 Score=44.49 Aligned_cols=30 Identities=27% Similarity=0.634 Sum_probs=25.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~-G~~V~~~d 176 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGM-GATVIGED 176 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999988765 48876654
No 161
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=93.10 E-value=0.091 Score=45.01 Aligned_cols=30 Identities=30% Similarity=0.486 Sum_probs=25.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~d 190 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAF-GMNVLVWG 190 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHhC-CCEEEEEC
Confidence 5899999999999999998766 48877664
No 162
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=93.07 E-value=0.092 Score=44.86 Aligned_cols=30 Identities=27% Similarity=0.565 Sum_probs=25.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~-G~~V~~~d 178 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAM-GAKVIAYD 178 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CeEEEEecCHHHHHHHHHHhhC-CCEEEEEC
Confidence 5899999999999999998866 48877664
No 163
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=93.07 E-value=0.093 Score=44.45 Aligned_cols=30 Identities=20% Similarity=0.479 Sum_probs=25.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~-G~~V~~~d 175 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGF-GAKVIAYD 175 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999988766 47866553
No 164
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=93.07 E-value=0.087 Score=42.07 Aligned_cols=41 Identities=22% Similarity=0.429 Sum_probs=28.9
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCc---eEEEEecCCCchhhhhh
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDV---ELVAVNDPFITTDYMTY 45 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~---~ivaInd~~~~~~~~~~ 45 (188)
|+ +||+|+|+|.+|+.+++.+.+.... +++ +.|. +.+.+..
T Consensus 1 M~-~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~-~~~r--~~~~~~~ 44 (247)
T 3gt0_A 1 MD-KQIGFIGCGNMGMAMIGGMINKNIVSSNQII-CSDL--NTANLKN 44 (247)
T ss_dssp CC-CCEEEECCSHHHHHHHHHHHHTTSSCGGGEE-EECS--CHHHHHH
T ss_pred CC-CeEEEECccHHHHHHHHHHHhCCCCCCCeEE-EEeC--CHHHHHH
Confidence 54 7999999999999999999876421 544 5565 3444433
No 165
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=93.05 E-value=0.22 Score=44.13 Aligned_cols=103 Identities=18% Similarity=0.317 Sum_probs=66.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCC--------C-chhhhhhhhhccccc-CcCCCcceEEeCCCeeEECC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF--------I-TTDYMTYMFKYDSVH-GQWKHHELKVKDDKTLLFGE 73 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~--------~-~~~~~~~l~~yDS~~-g~~~~~~v~~~~~~~l~i~g 73 (188)
.+|+|-|||-+|...++.+.+. +..+|+|.|.. . +++.+..|+++-..+ |++. . +.+ + + +.
T Consensus 231 ~~v~VqG~GnVG~~~a~~L~~~-GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~-~---y~~-~-~--~a 301 (449)
T 1bgv_A 231 KTVALAGFGNVAWGAAKKLAEL-GAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQ-D---YAD-K-F--GV 301 (449)
T ss_dssp CEEEECCSSHHHHHHHHHHHHH-TCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTH-H---HHH-H-H--TC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChh-h---ccc-c-c--CC
Confidence 6899999999999999888776 59999998842 1 344555555543322 2222 0 100 0 1 12
Q ss_pred EEEEEEeecCCCCCCcccCCccEEEeec-CcccCHHhHHHHHhCCCcEEEEe
Q 029791 74 KPVTVFGVRNPEEIPWAETGAEYVVEST-GVFTDKDKAAAHLKGGAKKVIIS 124 (188)
Q Consensus 74 ~~i~v~~~~~p~~~~w~~~~vdiV~e~t-g~~~~~~~~~~h~~~Gakkviis 124 (188)
+.+ . ++++ | ..++|+.+-|+ +..++.+.++...+.||| +|.-
T Consensus 302 ~~i---~---~~e~-~-~~~~Dil~P~A~~~~I~~~na~~l~a~g~k-iV~E 344 (449)
T 1bgv_A 302 QFF---P---GEKP-W-GQKVDIIMPCATQNDVDLEQAKKIVANNVK-YYIE 344 (449)
T ss_dssp EEE---E---TCCG-G-GSCCSEEECCSCTTCBCHHHHHHHHHTTCC-EEEC
T ss_pred EEe---C---chhh-h-cCCcceeeccccccccchhhHHHHHhcCCe-EEEe
Confidence 222 1 2333 7 46899999876 667888999887778996 4553
No 166
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=93.03 E-value=0.57 Score=35.54 Aligned_cols=31 Identities=35% Similarity=0.486 Sum_probs=26.5
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
|||.|.| .|.||+.+++.+.+.+ .+++++.-
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g-~~V~~~~R 32 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG-HEVTAIVR 32 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC-CEEEEEEc
Confidence 3899999 7999999999998875 78888764
No 167
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=92.99 E-value=0.1 Score=44.40 Aligned_cols=30 Identities=33% Similarity=0.545 Sum_probs=25.3
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~-G~~V~~~d 195 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSF-GMKTIGYD 195 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998765 48876654
No 168
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=92.98 E-value=0.1 Score=43.91 Aligned_cols=30 Identities=30% Similarity=0.541 Sum_probs=25.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~-G~~V~~~d 176 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGF-DMDIDYFD 176 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998865 48877664
No 169
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=92.98 E-value=0.11 Score=45.53 Aligned_cols=33 Identities=30% Similarity=0.563 Sum_probs=29.6
Q ss_pred cEEEEEccChHHHHHHHHHHc-CCCceEEEEecCC
Q 029791 4 VKIGINGFGRIGRLVARVILQ-RDDVELVAVNDPF 37 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~-~~~~~ivaInd~~ 37 (188)
.+|+|.|||+||+.+++.+.. . ++++++++|+.
T Consensus 213 ktvgI~G~G~VG~~vA~~l~~~~-G~kVv~~sD~~ 246 (419)
T 1gtm_A 213 KTIAIQGYGNAGYYLAKIMSEDF-GMKVVAVSDSK 246 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEEEEEECSS
T ss_pred CEEEEEcCCHHHHHHHHHHHHhc-CCEEEEEeCCC
Confidence 589999999999999998887 5 69999999874
No 170
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=92.92 E-value=0.1 Score=44.47 Aligned_cols=29 Identities=28% Similarity=0.397 Sum_probs=24.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEE
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaI 33 (188)
.+|||+|+|+||+.+++.+... ++++++.
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~-G~~V~~~ 200 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAF-GMSVRYW 200 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEE
Confidence 6899999999999999998765 4776544
No 171
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.92 E-value=0.86 Score=37.59 Aligned_cols=31 Identities=35% Similarity=0.458 Sum_probs=24.3
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
|+ +||+|+|.|.+|..++..+. . +.++..+.
T Consensus 1 M~-mkI~IiGaGa~G~~~a~~L~-~-g~~V~~~~ 31 (307)
T 3ego_A 1 MS-LKIGIIGGGSVGLLCAYYLS-L-YHDVTVVT 31 (307)
T ss_dssp -C-CEEEEECCSHHHHHHHHHHH-T-TSEEEEEC
T ss_pred CC-CEEEEECCCHHHHHHHHHHh-c-CCceEEEE
Confidence 54 79999999999999888887 4 46766654
No 172
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=92.88 E-value=0.11 Score=44.46 Aligned_cols=32 Identities=31% Similarity=0.550 Sum_probs=26.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~ 37 (188)
.+|||+|+|+||+.+++.+... ++++++. |+.
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~-G~~V~~~-d~~ 200 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAF-GFNVLFY-DPY 200 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEE-CTT
T ss_pred CEEEEEeECHHHHHHHHHHHHC-CCEEEEE-CCC
Confidence 5899999999999999998866 4887665 553
No 173
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=92.82 E-value=0.14 Score=41.70 Aligned_cols=31 Identities=26% Similarity=0.207 Sum_probs=25.9
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
.+|.|.| .|.+|+.+++.+.+.+ .+++++.-
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R 43 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLG-HPTYVFTR 43 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTT-CCEEEEEC
T ss_pred CeEEEECCCchHHHHHHHHHHHCC-CcEEEEEC
Confidence 4899999 7999999999998874 77777654
No 174
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=92.80 E-value=0.085 Score=44.02 Aligned_cols=30 Identities=33% Similarity=0.550 Sum_probs=25.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~d 152 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAF-GMRVIAYT 152 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEEC
T ss_pred chheeeccCchhHHHHHHHHhh-CcEEEEEe
Confidence 5899999999999999988765 48877764
No 175
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=92.77 E-value=0.099 Score=44.79 Aligned_cols=30 Identities=30% Similarity=0.460 Sum_probs=25.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~-G~~V~~~d 194 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPF-GCNLLYHD 194 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-CCEEEEEC
T ss_pred CEEeEEEeCHHHHHHHHHHHHC-CCEEEEeC
Confidence 5899999999999999998765 48866554
No 176
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.76 E-value=0.16 Score=36.02 Aligned_cols=30 Identities=27% Similarity=0.560 Sum_probs=25.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
++|.|.|+|++|+.+++.+.+.+ .+++.+.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g-~~v~~~d 34 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKG-HDIVLID 34 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CeEEEEE
Confidence 68999999999999999988764 7777664
No 177
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=92.76 E-value=0.084 Score=44.75 Aligned_cols=32 Identities=22% Similarity=0.290 Sum_probs=25.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~ 37 (188)
.+|||+|+|+||+.+++.+... ++++++. |+.
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~-G~~V~~~-d~~ 177 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGW-GATLQYH-EAK 177 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTS-CCEEEEE-CSS
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEEE-CCC
Confidence 6899999999999999987655 5886665 553
No 178
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=92.68 E-value=0.1 Score=44.96 Aligned_cols=32 Identities=34% Similarity=0.691 Sum_probs=26.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~ 37 (188)
.+|||+|+|+||+.+++.+... ++++++. |+.
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~f-G~~V~~~-d~~ 208 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGF-RARIRVF-DPW 208 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTS-CCEEEEE-CSS
T ss_pred CEEEEecCCcccHHHHHhhhhC-CCEEEEE-CCC
Confidence 5899999999999999988655 5887765 454
No 179
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=92.67 E-value=0.1 Score=42.47 Aligned_cols=31 Identities=29% Similarity=0.617 Sum_probs=25.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
+||+|+|+|.+|+.+++.+...+ .++ .+.|.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g-~~V-~~~~~ 36 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAG-YSL-VVSDR 36 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEE-EEECS
T ss_pred ceEEEECchHHHHHHHHHHHhCC-CEE-EEEeC
Confidence 69999999999999999988764 675 45565
No 180
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=92.66 E-value=0.29 Score=40.79 Aligned_cols=89 Identities=18% Similarity=0.238 Sum_probs=57.6
Q ss_pred ccEEEEEcc-ChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEee
Q 029791 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~kvgI~G~-GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
+.|+.|.|. |+.|+.+++.+.+. ++++++-.+|... ++. +.|.+ ++
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~-g~~~v~~VnP~~~--------------------------g~~--i~G~~--vy-- 59 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEY-GTKVVAGVTPGKG--------------------------GSE--VHGVP--VY-- 59 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCT--------------------------TCE--ETTEE--EE--
T ss_pred CCEEEEECCCCCHHHHHHHHHHhC-CCcEEEEeCCCCC--------------------------Cce--ECCEe--ee--
Confidence 468999996 99999999998875 5776654445200 000 12222 21
Q ss_pred cCCCCCCcccCC-ccEEEeecCcccCHHhHHHHHhCCCcEEEE-eC
Q 029791 82 RNPEEIPWAETG-AEYVVESTGVFTDKDKAAAHLKGGAKKVII-SA 125 (188)
Q Consensus 82 ~~p~~~~w~~~~-vdiV~e~tg~~~~~~~~~~h~~~Gakkvii-s~ 125 (188)
.+.++++- +.+ +|+++.+++.....+.+...+++|+|.+|+ +.
T Consensus 60 ~sl~el~~-~~~~~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi~t~ 104 (297)
T 2yv2_A 60 DSVKEALA-EHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVVITE 104 (297)
T ss_dssp SSHHHHHH-HCTTCCEEEECCCGGGHHHHHHHHHHTTCSEEEECCC
T ss_pred CCHHHHhh-cCCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECC
Confidence 22222221 113 899999999988888888899999985554 54
No 181
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=92.65 E-value=0.12 Score=43.40 Aligned_cols=30 Identities=33% Similarity=0.572 Sum_probs=25.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 145 ~~vgIIG~G~IG~~~A~~l~~~-G~~V~~~d 174 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAVAKRALAF-GMRVVYHA 174 (311)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEEECHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998866 47876654
No 182
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=92.60 E-value=0.13 Score=41.84 Aligned_cols=31 Identities=23% Similarity=0.345 Sum_probs=25.6
Q ss_pred cEEEEEcc-ChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~-GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
+||+|+|+ |.+|+.+++.+...+ .+++ +.|.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g-~~V~-~~~r 43 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSA-HHLA-AIEI 43 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSS-SEEE-EECC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-CEEE-EEEC
Confidence 69999999 999999999988764 6766 4454
No 183
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=92.57 E-value=0.12 Score=43.87 Aligned_cols=32 Identities=31% Similarity=0.454 Sum_probs=26.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~ 37 (188)
.++||+|+|+||+.+++.+... ++++++. |+.
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~f-g~~v~~~-d~~ 173 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAF-GMKVLCY-DVV 173 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEE-CSS
T ss_pred cEEEEECcchHHHHHHHhhccc-Cceeeec-CCc
Confidence 5899999999999999988766 4887765 553
No 184
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=92.48 E-value=0.13 Score=43.06 Aligned_cols=32 Identities=41% Similarity=0.729 Sum_probs=26.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~ 37 (188)
.+|||+|+|+||+.+++.+... ++++++. |+.
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~-G~~V~~~-d~~ 174 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANAL-GMNILLY-DPY 174 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEE-CSS
T ss_pred ceEEEEccCHHHHHHHHHHHHC-CCEEEEE-CCC
Confidence 5899999999999999998866 4787655 443
No 185
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=92.45 E-value=0.13 Score=43.56 Aligned_cols=30 Identities=17% Similarity=0.450 Sum_probs=25.3
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~-G~~V~~~d 176 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGF-GAKVITYD 176 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998866 47876654
No 186
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=92.41 E-value=0.13 Score=43.10 Aligned_cols=32 Identities=38% Similarity=0.571 Sum_probs=26.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~ 37 (188)
.+|||+|+|+||+.+++.+... ++++++. |+.
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~-G~~V~~~-d~~ 174 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAM-GMKVLAY-DIL 174 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-TCEEEEE-CSS
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEEE-CCC
Confidence 6899999999999999998866 4787655 443
No 187
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=92.35 E-value=0.13 Score=41.99 Aligned_cols=32 Identities=31% Similarity=0.531 Sum_probs=26.0
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
++||+|+|+|.+|+.+++.+... +.+++ +.|.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~-g~~V~-~~~~ 35 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKE-GVTVY-AFDL 35 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHT-TCEEE-EECS
T ss_pred CCEEEEECccHHHHHHHHHHHHC-CCeEE-EEeC
Confidence 47999999999999999998876 46765 5555
No 188
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=92.30 E-value=0.13 Score=44.82 Aligned_cols=30 Identities=23% Similarity=0.383 Sum_probs=25.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.++||+|+|+||+.+++.+... ++++++.+
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~-G~~V~~~d 175 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESL-GMYVYFYD 175 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHC-CCEEEEEc
Confidence 5899999999999999998866 48876553
No 189
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=92.27 E-value=0.17 Score=41.76 Aligned_cols=32 Identities=31% Similarity=0.447 Sum_probs=24.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~-~ivaInd~ 36 (188)
+||+|+|.|.+|..++..+...+.+ +++ +.|.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~-l~d~ 40 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIV-LEDI 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEE-EEeC
Confidence 6999999999999998888766423 554 4454
No 190
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=92.27 E-value=0.14 Score=44.54 Aligned_cols=30 Identities=20% Similarity=0.374 Sum_probs=25.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~-G~~V~~~d 149 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEAL-GIRTLLCD 149 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999999876 48877663
No 191
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=92.18 E-value=0.14 Score=44.38 Aligned_cols=31 Identities=23% Similarity=0.448 Sum_probs=25.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.+|||+|+|+||+.+++.+... ++++++. |+
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~-d~ 147 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGL-GWKVLVC-DP 147 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEE-CH
T ss_pred CEEEEEeCCHHHHHHHHHHHHC-CCEEEEE-cC
Confidence 6899999999999999998866 4887664 44
No 192
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=92.17 E-value=0.17 Score=42.17 Aligned_cols=33 Identities=27% Similarity=0.348 Sum_probs=25.7
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
++||||+|+|.+|..+++.+.+....+++. .|.
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~-~dr 56 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAA-YDL 56 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEE-ECG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEE-EeC
Confidence 479999999999999999988763156554 454
No 193
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=92.11 E-value=0.15 Score=43.31 Aligned_cols=31 Identities=29% Similarity=0.393 Sum_probs=25.4
Q ss_pred cEEEEEccChHHHHHHHHHH-cCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVIL-QRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~-~~~~~~ivaInd~ 36 (188)
.+|||+|+|+||+.+++.+. .. ++++++. |+
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~-G~~V~~~-d~ 195 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGL-GMKLVYY-DV 195 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEEEEE-CS
T ss_pred CEEEEEEECHHHHHHHHHHHHhc-CCEEEEE-CC
Confidence 58999999999999999987 65 4787654 44
No 194
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=92.11 E-value=0.24 Score=35.71 Aligned_cols=34 Identities=29% Similarity=0.347 Sum_probs=30.7
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
+.++.|+|.|..|+.+++.+...++++++++-|.
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~ 37 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDD 37 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEEC
Confidence 4689999999999999999987778999999986
No 195
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=92.08 E-value=0.16 Score=41.84 Aligned_cols=37 Identities=24% Similarity=0.364 Sum_probs=28.3
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhh
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~ 43 (188)
++||+|+|+|.+|..+++.+.+.. .+++.. |. +.+.+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G-~~V~~~-dr--~~~~~ 43 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAG-LSTWGA-DL--NPQAC 43 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS--CHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CeEEEE-EC--CHHHH
Confidence 479999999999999999998764 676655 55 44444
No 196
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=92.07 E-value=0.22 Score=43.84 Aligned_cols=34 Identities=18% Similarity=0.221 Sum_probs=26.2
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
|++.+|.|.|.|.+|+.+++.+.+. +.+++ +.|.
T Consensus 1 M~~k~VlViGaG~iG~~ia~~L~~~-G~~V~-v~~R 34 (450)
T 1ff9_A 1 MATKSVLMLGSGFVTRPTLDVLTDS-GIKVT-VACR 34 (450)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHTT-TCEEE-EEES
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-cCEEE-EEEC
Confidence 6567899999999999999999865 47744 4444
No 197
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.07 E-value=0.18 Score=40.24 Aligned_cols=32 Identities=25% Similarity=0.357 Sum_probs=26.1
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.+||||+|+|.+|..+++.+.... .+++.. |.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G-~~V~~~-~r 50 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLG-HEVTIG-TR 50 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-ES
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CEEEEE-eC
Confidence 479999999999999999998764 676554 44
No 198
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=92.03 E-value=0.18 Score=41.79 Aligned_cols=32 Identities=16% Similarity=0.438 Sum_probs=26.1
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
++||||+|+|.+|+.+++.+.+.. .+++.. |.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G-~~V~~~-dr 52 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNG-FKVTVW-NR 52 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CCEEEEECccHHHHHHHHHHHHCC-CeEEEE-eC
Confidence 479999999999999999998764 676554 55
No 199
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=92.03 E-value=0.17 Score=41.20 Aligned_cols=31 Identities=29% Similarity=0.301 Sum_probs=26.0
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
++|.|.| .|.+|+.+++.+.+.+ .+++++.-
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R 36 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASLSFS-HPTFIYAR 36 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTT-CCEEEEEC
T ss_pred cEEEEEcCCchhHHHHHHHHHhCC-CcEEEEEC
Confidence 6899999 7999999999998874 77777653
No 200
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=92.00 E-value=0.4 Score=44.80 Aligned_cols=31 Identities=19% Similarity=0.316 Sum_probs=25.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.||+|+|.|.+|..++..+... +++++.. |.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~a-G~~V~l~-D~ 343 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILS-NYPVILK-EV 343 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-TCCEEEE-CS
T ss_pred cEEEEEcCCHhhHHHHHHHHhC-CCEEEEE-EC
Confidence 5899999999999999988876 4776555 44
No 201
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=91.94 E-value=0.16 Score=39.85 Aligned_cols=30 Identities=27% Similarity=0.387 Sum_probs=24.2
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEE
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaI 33 (188)
++||+|+|+|.+|+.+++.+...+ .+++.+
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g-~~V~~~ 57 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSG-FKVVVG 57 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTT-CCEEEE
T ss_pred CCEEEEEccCHHHHHHHHHHHHCC-CEEEEE
Confidence 368999999999999999988764 566554
No 202
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=91.90 E-value=0.41 Score=42.44 Aligned_cols=102 Identities=15% Similarity=0.277 Sum_probs=63.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCC--------Cchhhhhhhhhc-ccccCcCCCcceEEeCCCeeEECCE
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF--------ITTDYMTYMFKY-DSVHGQWKHHELKVKDDKTLLFGEK 74 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~--------~~~~~~~~l~~y-DS~~g~~~~~~v~~~~~~~l~i~g~ 74 (188)
.+|+|-|||.+|...++.+.+. +..+|++.|.. .+.+.+..+++. .+..|+.. .-.+ +.+ .+
T Consensus 236 k~vaVQG~GnVG~~aa~~L~e~-GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~-~~~~-~~g------~~ 306 (450)
T 4fcc_A 236 MRVSVSGSGNVAQYAIEKAMEF-GARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVA-DYAK-EFG------LV 306 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHH-HHHH-HHT------CE
T ss_pred CEEEEeCCChHHHHHHHHHHhc-CCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccc-cccc-cCC------cE
Confidence 6899999999999999988876 58999998754 245555555542 22122211 0000 001 11
Q ss_pred EEEEEeecCCCCCCcccCCccEEEee-cCcccCHHhHHHHHhCCCcEEEE
Q 029791 75 PVTVFGVRNPEEIPWAETGAEYVVES-TGVFTDKDKAAAHLKGGAKKVII 123 (188)
Q Consensus 75 ~i~v~~~~~p~~~~w~~~~vdiV~e~-tg~~~~~~~~~~h~~~Gakkvii 123 (188)
. + . +++ .|. .++|+.+=| ++.-++.+.++.-.+.||| +|+
T Consensus 307 ~--~-~---~~~-i~~-~~~DI~iPcAl~~~I~~~~a~~L~a~g~k-~Ia 347 (450)
T 4fcc_A 307 Y--L-E---GQQ-PWS-VPVDIALPCATQNELDVDAAHQLIANGVK-AVA 347 (450)
T ss_dssp E--E-E---TCC-GGG-SCCSEEEECSCTTCBCHHHHHHHHHTTCC-EEE
T ss_pred E--e-c---Ccc-ccc-CCccEEeeccccccccHHHHHHHHhcCce-EEe
Confidence 1 1 1 222 265 589999977 5777888888877778896 344
No 203
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=91.89 E-value=0.14 Score=42.73 Aligned_cols=33 Identities=18% Similarity=0.362 Sum_probs=25.3
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCC---ceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDD---VELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~---~~ivaInd~ 36 (188)
++||+|+|+|.+|..+++.+.+... .+++. .|.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v-~~r 57 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMA-SSP 57 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEE-ECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEE-ECC
Confidence 5799999999999999999876531 45554 454
No 204
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=91.85 E-value=0.13 Score=42.62 Aligned_cols=31 Identities=32% Similarity=0.548 Sum_probs=24.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.|||++|+|.+|..+++++.+. ++++++ .|.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-G~~V~v-~dr 36 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-GYELVV-WNR 36 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCEEEE-C--
T ss_pred CcEEEEecHHHHHHHHHHHHHC-CCeEEE-EeC
Confidence 6999999999999999999887 477665 444
No 205
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=91.78 E-value=0.16 Score=42.79 Aligned_cols=30 Identities=33% Similarity=0.530 Sum_probs=25.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
++|||+|+|+||+.+++.+... ++++++.+
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~-G~~V~~~d 185 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPF-GVQRFLYT 185 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-TCCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999988765 47776654
No 206
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=91.75 E-value=0.33 Score=42.67 Aligned_cols=34 Identities=24% Similarity=0.463 Sum_probs=30.2
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~ 37 (188)
..+|+|.|||.+|+..++.+.+. +..+|+|.|..
T Consensus 212 g~~vaVqG~GnVG~~~a~~L~~~-GakvVavsD~~ 245 (421)
T 2yfq_A 212 DAKIAVQGFGNVGTFTVKNIERQ-GGKVCAIAEWD 245 (421)
T ss_dssp GSCEEEECCSHHHHHHHHHHHHT-TCCEEECCBCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCEEEEEEecC
Confidence 36899999999999999988876 59999999985
No 207
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=91.74 E-value=0.15 Score=43.29 Aligned_cols=29 Identities=34% Similarity=0.462 Sum_probs=23.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEE
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaI 33 (188)
.+|||+|+|+||+.+++.+... ++++++.
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~-G~~V~~~ 193 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAF-DCPISYF 193 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-TCCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEE
Confidence 5899999999999999998765 4776544
No 208
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=91.74 E-value=0.86 Score=40.02 Aligned_cols=33 Identities=27% Similarity=0.459 Sum_probs=29.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~ 37 (188)
.+|+|.|||-+|+..++.+.+. +..+|+|.|..
T Consensus 211 k~vaVqG~GnVG~~aa~~L~e~-GakVVavsD~~ 243 (421)
T 1v9l_A 211 KTVAIQGMGNVGRWTAYWLEKM-GAKVIAVSDIN 243 (421)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEEECCC
Confidence 6899999999999999988776 69999999974
No 209
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=91.73 E-value=0.15 Score=45.14 Aligned_cols=34 Identities=18% Similarity=0.393 Sum_probs=27.0
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
|.++||||+|+|.+|+.+++.+.+.+ ++++ +.|.
T Consensus 3 m~~~~IgvIG~G~mG~~lA~~L~~~G-~~V~-v~dr 36 (474)
T 2iz1_A 3 MAQANFGVVGMAVMGKNLALNVESRG-YTVA-IYNR 36 (474)
T ss_dssp CTTBSEEEECCSHHHHHHHHHHHHTT-CCEE-EECS
T ss_pred CCCCcEEEEeeHHHHHHHHHHHHhCC-CEEE-EEcC
Confidence 54579999999999999999998764 6754 4554
No 210
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=91.72 E-value=0.56 Score=41.11 Aligned_cols=35 Identities=34% Similarity=0.588 Sum_probs=30.2
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~ 37 (188)
..+|+|.|||-+|+..++.+.++.+..+|+|.|..
T Consensus 209 g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~ 243 (415)
T 2tmg_A 209 KATVAVQGFGNVGQFAALLISQELGSKVVAVSDSR 243 (415)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 36899999999999999988873469999999974
No 211
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=91.69 E-value=0.43 Score=42.01 Aligned_cols=34 Identities=24% Similarity=0.555 Sum_probs=29.9
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~ 37 (188)
..+|+|-|||.+|+..++.+.+. +..+|+|.|..
T Consensus 221 g~~vaVqG~GnVG~~aa~~l~e~-GakVVavsD~~ 254 (424)
T 3k92_A 221 NARIIIQGFGNAGSFLAKFMHDA-GAKVIGISDAN 254 (424)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHH-TCEEEEEECSS
T ss_pred cCEEEEECCCHHHHHHHHHHHHC-CCEEEEEECCC
Confidence 36899999999999999988776 59999999985
No 212
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=91.67 E-value=0.21 Score=40.77 Aligned_cols=34 Identities=21% Similarity=0.224 Sum_probs=27.0
Q ss_pred CC-ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 1 m~-~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
|| +.||+|+|.|.+|+.+++.+... +++++. .|.
T Consensus 1 Mm~~~kV~VIGaG~mG~~iA~~la~~-G~~V~l-~d~ 35 (283)
T 4e12_A 1 MTGITNVTVLGTGVLGSQIAFQTAFH-GFAVTA-YDI 35 (283)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHT-TCEEEE-ECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhC-CCeEEE-EeC
Confidence 54 46899999999999999988876 477555 565
No 213
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=91.64 E-value=0.16 Score=44.22 Aligned_cols=30 Identities=33% Similarity=0.439 Sum_probs=25.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~-G~~V~~~d 221 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPF-DVHLHYTD 221 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-TCEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHhC-CCEEEEEc
Confidence 5899999999999999988765 48877654
No 214
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=91.61 E-value=0.17 Score=41.96 Aligned_cols=40 Identities=15% Similarity=0.412 Sum_probs=29.3
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhh
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l 46 (188)
++||||+|+|.+|+.+++.+.+.. .+++.. |. +.+....+
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G-~~V~~~-dr--~~~~~~~~ 48 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQG-KRVAIW-NR--SPGKAAAL 48 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTT-CCEEEE-CS--SHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CEEEEE-eC--CHHHHHHH
Confidence 368999999999999999998764 676554 55 44444333
No 215
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=91.55 E-value=0.23 Score=41.53 Aligned_cols=34 Identities=12% Similarity=0.234 Sum_probs=25.1
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
++||+|+|.|.+|..++..+...+-+.-+.+.|.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di 39 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDA 39 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 4699999999999998888765543333445565
No 216
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=91.53 E-value=0.17 Score=42.77 Aligned_cols=32 Identities=34% Similarity=0.534 Sum_probs=25.7
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~ 37 (188)
++|||+|+|+||+.+++.+... ++++++. |+.
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~-G~~V~~~-d~~ 178 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPF-GVKLYYW-SRH 178 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-TCEEEEE-CSS
T ss_pred CEEEEEccCHHHHHHHHHHHHC-CCEEEEE-CCC
Confidence 5899999999999999988765 4776654 553
No 217
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=91.52 E-value=0.19 Score=42.43 Aligned_cols=32 Identities=28% Similarity=0.449 Sum_probs=25.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~ 37 (188)
++|||+|+|+||+.+++.+... ++++++. |+.
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~-G~~V~~~-d~~ 182 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGF-NMRILYY-SRT 182 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEE-CSS
T ss_pred CEEEEEccCHHHHHHHHHHHhC-CCEEEEE-CCC
Confidence 5899999999999999988866 4776655 443
No 218
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=91.49 E-value=2.4 Score=38.07 Aligned_cols=32 Identities=19% Similarity=0.393 Sum_probs=28.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.+|+|-|||.+|+..++.+.+. +..+|+|.|.
T Consensus 245 ~tVaVQG~GNVG~~aa~~L~e~-GakVVavsDs 276 (501)
T 3mw9_A 245 KTFVVQGFGNVGLHSMRYLHRF-GAKCITVGES 276 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEEcC
Confidence 6899999999999999988876 5899999885
No 219
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=91.39 E-value=0.17 Score=35.89 Aligned_cols=30 Identities=23% Similarity=0.490 Sum_probs=24.7
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.+|.|.|+|.+|+.+++.+...+ .+++.+.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g-~~v~~~d 36 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMG-HEVLAVD 36 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT-CCCEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 47999999999999999988764 6766654
No 220
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=91.38 E-value=0.14 Score=43.88 Aligned_cols=93 Identities=18% Similarity=0.194 Sum_probs=55.3
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeec
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
..||+|+|.|.+|+.+++.+.+. .+ +.|.|. +.+.+..+.+ . + .. +.++ + .
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~--~~-V~V~~R--~~~~a~~la~--~----~--~~--------~~~d-----~---~ 66 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE--FD-VYIGDV--NNENLEKVKE--F----A--TP--------LKVD-----A---S 66 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT--SE-EEEEES--CHHHHHHHTT--T----S--EE--------EECC-----T---T
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC--Ce-EEEEEC--CHHHHHHHHh--h----C--Ce--------EEEe-----c---C
Confidence 36999999999999999998765 55 456665 4444433221 0 0 00 0000 0 1
Q ss_pred CCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
+++.+.=--.++|+|+.|++.....+-+...+++|+ .+++..
T Consensus 67 ~~~~l~~ll~~~DvVIn~~P~~~~~~v~~a~l~~G~--~~vD~s 108 (365)
T 2z2v_A 67 NFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKV--DMVDVS 108 (365)
T ss_dssp CHHHHHHHHTTCSCEEECCCHHHHHHHHHHHHHTTC--CEEECC
T ss_pred CHHHHHHHHhCCCEEEECCChhhhHHHHHHHHHhCC--eEEEcc
Confidence 111110001268999999997766677777888888 456543
No 221
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=91.37 E-value=0.14 Score=42.19 Aligned_cols=32 Identities=22% Similarity=0.369 Sum_probs=25.8
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
++||||+|+|.+|+.+++.+.+. +.+++.. |.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~-G~~V~~~-dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW-PGGVTVY-DI 46 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS-TTCEEEE-CS
T ss_pred CCeEEEECcCHHHHHHHHHHHHC-CCeEEEE-eC
Confidence 46999999999999999998876 4676555 54
No 222
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.31 E-value=0.19 Score=41.33 Aligned_cols=32 Identities=25% Similarity=0.380 Sum_probs=25.4
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
++||+|+|+|.+|+.+++.+...+ .+++ +.|.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g-~~V~-~~~~ 61 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMG-HTVT-VWNR 61 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT-CCEE-EECS
T ss_pred CCeEEEEcccHHHHHHHHHHHhCC-CEEE-EEeC
Confidence 379999999999999999888764 6754 4454
No 223
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=91.30 E-value=0.21 Score=40.05 Aligned_cols=34 Identities=29% Similarity=0.394 Sum_probs=28.3
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEec
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
|+++||-|.|.|.||+.+++.+.+.+ .+++++.-
T Consensus 1 M~~~~ilVtGaG~iG~~l~~~L~~~g-~~V~~~~r 34 (286)
T 3gpi_A 1 MSLSKILIAGCGDLGLELARRLTAQG-HEVTGLRR 34 (286)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 66679999999999999999998874 78887754
No 224
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=91.26 E-value=0.21 Score=41.59 Aligned_cols=31 Identities=26% Similarity=0.280 Sum_probs=25.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
+||||+|+|.+|+.+++.+... +.+++. .|.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~-G~~V~~-~dr 62 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEA-GYALQV-WNR 62 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHT-TCEEEE-ECS
T ss_pred CEEEEECccHHHHHHHHHHHhC-CCeEEE-EcC
Confidence 6999999999999999999876 477554 455
No 225
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=91.26 E-value=0.32 Score=35.75 Aligned_cols=31 Identities=32% Similarity=0.454 Sum_probs=26.0
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
..+|.|.|+|++|+.+++.+...+ .+++.+.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g-~~V~vid 49 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSG-HSVVVVD 49 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhCC-CeEEEEE
Confidence 368999999999999999988764 6777764
No 226
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=91.13 E-value=0.2 Score=40.96 Aligned_cols=36 Identities=22% Similarity=0.319 Sum_probs=27.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhh
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~ 43 (188)
+||+|+|+|.+|+.+++.+.+.. .+++.. |. +.+.+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G-~~V~~~-d~--~~~~~ 39 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAG-YLLNVF-DL--VQSAV 39 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEEEEE-CS--SHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHhCC-CeEEEE-cC--CHHHH
Confidence 69999999999999999998764 676555 55 34444
No 227
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.09 E-value=0.19 Score=37.91 Aligned_cols=32 Identities=22% Similarity=0.220 Sum_probs=25.7
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
.+|.|.|+|++|+.+++.+.+..+.+++++..
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~ 71 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEI 71 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEEC
Confidence 58999999999999999887651367777753
No 228
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=91.08 E-value=0.21 Score=43.78 Aligned_cols=30 Identities=23% Similarity=0.420 Sum_probs=25.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.++||+|+|+||+.+++.+... ++++++.+
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~-G~~V~~yd 186 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESL-GMTVRYYD 186 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999988766 48876654
No 229
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=91.07 E-value=0.54 Score=39.22 Aligned_cols=34 Identities=35% Similarity=0.447 Sum_probs=26.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~ 37 (188)
|||+|+|.|.||..++..+..++-+.=+.+-|..
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~ 34 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA 34 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4999999999999998888766655545566763
No 230
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=91.07 E-value=0.17 Score=42.00 Aligned_cols=33 Identities=27% Similarity=0.373 Sum_probs=25.2
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
++||||+|+|.+|..+++.+.+.. .+-|.+.|.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G-~~~V~~~dr 56 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAG-AIDMAAYDA 56 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHS-CCEEEEECS
T ss_pred CCEEEEECccHHHHHHHHHHHHCC-CCeEEEEcC
Confidence 479999999999999999998764 523445565
No 231
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=91.04 E-value=0.17 Score=40.85 Aligned_cols=30 Identities=20% Similarity=0.309 Sum_probs=24.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
+||+|+|+|.+|+.+++.+.. +.+++ +.|.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~--g~~V~-~~~~ 31 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR--RFPTL-VWNR 31 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT--TSCEE-EECS
T ss_pred CeEEEEcccHHHHHHHHHHhC--CCeEE-EEeC
Confidence 489999999999999998887 57765 4454
No 232
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=91.03 E-value=0.26 Score=39.80 Aligned_cols=32 Identities=19% Similarity=0.246 Sum_probs=24.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCC-CceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRD-DVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~-~~~ivaInd~ 36 (188)
+||+|+|+|.+|+.+++.+...+ ..++++ .|+
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~-~d~ 34 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYG-YDI 34 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEE-ECS
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEE-EeC
Confidence 48999999999999999988664 126554 565
No 233
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=91.00 E-value=0.18 Score=44.96 Aligned_cols=42 Identities=12% Similarity=0.180 Sum_probs=30.1
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhh
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l 46 (188)
|.++||||+|+|.+|..+++.+.+.. +++++. |. +.+.+..+
T Consensus 2 ~~~~kIgiIGlG~MG~~lA~~L~~~G-~~V~v~-dr--~~~~~~~l 43 (484)
T 4gwg_A 2 NAQADIALIGLAVMGQNLILNMNDHG-FVVCAF-NR--TVSKVDDF 43 (484)
T ss_dssp -CCBSEEEECCSHHHHHHHHHHHHTT-CCEEEE-CS--STHHHHHH
T ss_pred CCCCEEEEEChhHHHHHHHHHHHHCC-CEEEEE-eC--CHHHHHHH
Confidence 44579999999999999999998764 676654 54 34444333
No 234
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=90.91 E-value=0.19 Score=43.07 Aligned_cols=30 Identities=27% Similarity=0.332 Sum_probs=24.7
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCce-EEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVE-LVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~-ivaIn 34 (188)
.+|||+|+|+||+.+++.+... +++ +++.+
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~-G~~~V~~~d 195 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPF-NPKELLYYD 195 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-CCSEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCcEEEEEC
Confidence 5899999999999999988765 476 76654
No 235
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=90.88 E-value=0.2 Score=42.26 Aligned_cols=29 Identities=24% Similarity=0.287 Sum_probs=23.3
Q ss_pred EEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 5 KIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 5 kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
||+|+|.|.+|..++..+... +.+++.++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~-G~~V~~~~ 45 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK-CREVCVWH 45 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-EEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCEEEEEE
Confidence 999999999999999888765 36655543
No 236
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=90.78 E-value=3 Score=33.60 Aligned_cols=32 Identities=13% Similarity=0.188 Sum_probs=26.7
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
.++|-|-| .|.||+.+++.+.+.+ .+++++..
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 43 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEHG-YKVRGTAR 43 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeC
Confidence 36899999 6999999999998874 78877754
No 237
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=90.77 E-value=0.2 Score=44.50 Aligned_cols=33 Identities=33% Similarity=0.462 Sum_probs=25.9
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
|.++||||+|+|.+|..+++.+.+. +.+++..+
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~~ 45 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESR-GYTVSIFN 45 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTT-TCCEEEEC
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhC-CCeEEEEe
Confidence 5578999999999999999999876 47765543
No 238
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=90.72 E-value=0.24 Score=41.22 Aligned_cols=31 Identities=26% Similarity=0.337 Sum_probs=25.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.|||++|+|.+|+.+++++.+. +++++. .|.
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~-G~~v~v-~dr 34 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKA-GYLLNV-FDL 34 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCEEEE-ECS
T ss_pred CEEEEeeehHHHHHHHHHHHhC-CCeEEE-EcC
Confidence 5999999999999999999876 477654 454
No 239
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=90.67 E-value=0.27 Score=39.95 Aligned_cols=31 Identities=19% Similarity=0.441 Sum_probs=25.7
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
+||+|+|+|.+|+.+++.+.+.. .+++ +.|.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G-~~V~-~~dr 32 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAG-CSVT-IWNR 32 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred CEEEEEeecHHHHHHHHHHHHCC-CeEE-EEcC
Confidence 59999999999999999998764 6766 4465
No 240
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=90.66 E-value=0.29 Score=40.23 Aligned_cols=30 Identities=23% Similarity=0.386 Sum_probs=24.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.+|+|+|+|+||+.+++.+...+ +++++.+
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~d 185 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALG-AKVKVGA 185 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC-CEEEEEE
Confidence 58999999999999999988764 6766554
No 241
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=90.65 E-value=1.6 Score=34.89 Aligned_cols=30 Identities=20% Similarity=0.207 Sum_probs=24.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.+|-|+|.|.+|...++.+.+.+ .+++.|+
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~G-A~VtVva 61 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEG-AAITVVA 61 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGC-CCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEC
Confidence 68999999999999999998764 5665554
No 242
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=90.65 E-value=0.23 Score=41.48 Aligned_cols=33 Identities=18% Similarity=0.280 Sum_probs=25.6
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
|+++||+|+|.|.+|..++..+.... .+++.+.
T Consensus 1 M~~mkI~IiGaG~~G~~~a~~L~~~g-~~V~~~~ 33 (335)
T 3ghy_A 1 MSLTRICIVGAGAVGGYLGARLALAG-EAINVLA 33 (335)
T ss_dssp -CCCCEEEESCCHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCC-CEEEEEE
Confidence 66689999999999999998887654 5655553
No 243
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=90.58 E-value=0.2 Score=38.99 Aligned_cols=31 Identities=29% Similarity=0.354 Sum_probs=26.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
|||.|.|+|++|+.+++.+.+. +.+++.+..
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~-g~~v~vid~ 31 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR-KYGVVIINK 31 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT-TCCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEEC
Confidence 3899999999999999999876 478887753
No 244
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=90.56 E-value=0.2 Score=44.40 Aligned_cols=33 Identities=18% Similarity=0.277 Sum_probs=26.7
Q ss_pred CccEEEEEccChHHHHHHHHHHcCC-CceEEEEe
Q 029791 2 GKVKIGINGFGRIGRLVARVILQRD-DVELVAVN 34 (188)
Q Consensus 2 ~~~kvgI~G~GriGr~~~r~~~~~~-~~~ivaIn 34 (188)
+++||+|+|+|.+|..++..+.+.. +.++++++
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D 41 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVD 41 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEE
Confidence 3479999999999999999887653 57877763
No 245
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=90.53 E-value=0.17 Score=36.82 Aligned_cols=31 Identities=23% Similarity=0.185 Sum_probs=26.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.||+|+|.|.+|+.+++.+... +++ +.+.|.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~-g~~-v~v~~r 52 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYP-QYK-VTVAGR 52 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTT-TCE-EEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCE-EEEEcC
Confidence 5899999999999999887764 588 777776
No 246
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=90.45 E-value=0.21 Score=44.00 Aligned_cols=35 Identities=29% Similarity=0.281 Sum_probs=27.5
Q ss_pred CC-ccEEEEEccChHHHHHHHHHHcCC-CceEEEEecC
Q 029791 1 MG-KVKIGINGFGRIGRLVARVILQRD-DVELVAVNDP 36 (188)
Q Consensus 1 m~-~~kvgI~G~GriGr~~~r~~~~~~-~~~ivaInd~ 36 (188)
|+ ++||+|+|+|.+|..++..+.+.. +.+++++ |.
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~-d~ 38 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVV-DV 38 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEE-CS
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEE-EC
Confidence 54 379999999999999999887652 5786665 44
No 247
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=90.44 E-value=0.31 Score=40.14 Aligned_cols=31 Identities=19% Similarity=0.340 Sum_probs=25.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.+|+|+|+|+||+.+++.+...+ +++++. |+
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~-d~ 188 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALG-ANVKVG-AR 188 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEE-ES
T ss_pred CEEEEEcccHHHHHHHHHHHHCC-CEEEEE-EC
Confidence 68999999999999999988764 676655 44
No 248
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=90.43 E-value=1.8 Score=35.71 Aligned_cols=30 Identities=20% Similarity=0.422 Sum_probs=24.3
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEE
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaI 33 (188)
++||+|+|.|.+|..++..+.... .+++.+
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G-~~V~l~ 48 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAG-HEVILI 48 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHCC-CeEEEE
Confidence 479999999999999998887653 566666
No 249
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=90.29 E-value=0.21 Score=40.22 Aligned_cols=31 Identities=29% Similarity=0.278 Sum_probs=25.4
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
++|.|.| .|.||+.+++.+.+.+ .+++++.-
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R 34 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAG-NPTYALVR 34 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHT-CCEEEEEC
T ss_pred cEEEEECCCchHHHHHHHHHHhCC-CcEEEEEC
Confidence 5899999 6999999999998764 67766653
No 250
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=90.22 E-value=0.28 Score=43.86 Aligned_cols=99 Identities=16% Similarity=0.226 Sum_probs=56.7
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCc---eEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEE
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDV---ELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~---~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
+.||.|+|+|-||+.+++.+.+++++ +++.+ |+......+.-.+ | ++.. ...++...+
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~va-D~~~~~~~~~~~~------g------~~~~---~~~Vdadnv--- 73 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTII-AAEGTKVDVAQQY------G------VSFK---LQQITPQNY--- 73 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEE-ESSCCSCCHHHHH------T------CEEE---ECCCCTTTH---
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEe-ccchhhhhHHhhc------C------Ccee---EEeccchhH---
Confidence 36899999999999999999877765 45544 5421111111000 0 0000 000100000
Q ss_pred eecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCC
Q 029791 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~p 126 (188)
+...+.+- ++ + |+||.++..+.+...++..+++|+ -.++..
T Consensus 74 -~~~l~aLl-~~-~-DvVIN~s~~~~~l~Im~acleaGv--~YlDTa 114 (480)
T 2ph5_A 74 -LEVIGSTL-EE-N-DFLIDVSIGISSLALIILCNQKGA--LYINAA 114 (480)
T ss_dssp -HHHTGGGC-CT-T-CEEEECCSSSCHHHHHHHHHHHTC--EEEESS
T ss_pred -HHHHHHHh-cC-C-CEEEECCccccCHHHHHHHHHcCC--CEEECC
Confidence 00022121 22 3 999999988888899999999999 567654
No 251
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=90.13 E-value=0.19 Score=40.74 Aligned_cols=30 Identities=23% Similarity=0.402 Sum_probs=24.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
+||+|+|+|.+|+.+++.+... +.+++..+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARA-GHQLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHT-TCEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhC-CCEEEEEc
Confidence 6999999999999999998876 46776544
No 252
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=89.95 E-value=0.46 Score=41.73 Aligned_cols=34 Identities=24% Similarity=0.413 Sum_probs=29.9
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~ 37 (188)
..+|+|-|||-+|+..++.+.+. +..+|+|.|..
T Consensus 218 gk~vaVqG~GnVG~~~a~~L~~~-GakVVavsD~~ 251 (419)
T 3aoe_E 218 GARVVVQGLGQVGAAVALHAERL-GMRVVAVATSM 251 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEEETT
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCEEEEEEcCC
Confidence 36899999999999999988876 59999999873
No 253
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=89.90 E-value=0.2 Score=40.79 Aligned_cols=31 Identities=16% Similarity=0.354 Sum_probs=25.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
+||+|+|+|.+|+.+++.+.+.. .+++.. |.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G-~~V~~~-dr 32 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAG-FDVTVW-NR 32 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHT-CCEEEE-CS
T ss_pred CeEEEEccCHHHHHHHHHHHHCC-CeEEEE-cC
Confidence 49999999999999999988663 665554 54
No 254
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=89.74 E-value=1.3 Score=37.50 Aligned_cols=33 Identities=30% Similarity=0.313 Sum_probs=25.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
+||+|+|.|.+|..++..+...+-+.-+.+.|.
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di 54 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALVDV 54 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 699999999999999988876654444555665
No 255
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=89.73 E-value=0.36 Score=38.47 Aligned_cols=31 Identities=29% Similarity=0.577 Sum_probs=25.3
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
|||+|+|+|.+|..+++.+.... .+++. .|+
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g-~~V~~-~~~ 31 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRG-VEVVT-SLE 31 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT-CEEEE-CCT
T ss_pred CeEEEEechHHHHHHHHHHHHCC-CeEEE-eCC
Confidence 38999999999999999988764 67666 555
No 256
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=89.73 E-value=0.34 Score=40.94 Aligned_cols=34 Identities=21% Similarity=0.253 Sum_probs=26.0
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.+||+|+|.|.+|..++..+...+-+.-+.+.|.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~ 38 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDV 38 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEec
Confidence 3799999999999999998887654434445565
No 257
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=89.71 E-value=1.1 Score=37.37 Aligned_cols=129 Identities=12% Similarity=0.228 Sum_probs=70.3
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
-+|.|+|.|.+|...++.+.... .+++++... .+.+.++.+ .|. +.+ + .+
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~---~~~~~~~~~----lGa-----------~~v-~----------~~ 227 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMG-AEVSVFARN---EHKKQDALS----MGV-----------KHF-Y----------TD 227 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT-CEEEEECSS---STTHHHHHH----TTC-----------SEE-E----------SS
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CeEEEEeCC---HHHHHHHHh----cCC-----------Cee-c----------CC
Confidence 47999999999999888877664 688777532 233333322 110 111 1 12
Q ss_pred CCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCC-CCCCeEEeecCccCC-CCCCceEEcCChhhHhHHH
Q 029791 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-KDAPMFVVGVNENEY-KPELNIVSNASCTTNCLAP 161 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps-~d~p~~V~gvN~~~~-~~~~~iis~~sCtT~~lap 161 (188)
++.+ . .++|+||||+|...+.+.+-..++.|-+-+++..++ ...+.+-+ .+.+ ..+..+...-..+...+..
T Consensus 228 ~~~~--~-~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~---~~~~~~~~~~i~g~~~~~~~~~~~ 301 (348)
T 3two_A 228 PKQC--K-EELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSV---FDFIHLGNRKVYGSLIGGIKETQE 301 (348)
T ss_dssp GGGC--C-SCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEH---HHHHHTCSCEEEECCSCCHHHHHH
T ss_pred HHHH--h-cCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCH---HHHHhhCCeEEEEEecCCHHHHHH
Confidence 2222 2 289999999998766666666666555333332222 22221110 1111 2234555544444556777
Q ss_pred HHHHHHh
Q 029791 162 LAKVIHD 168 (188)
Q Consensus 162 ~l~~l~~ 168 (188)
+++.+.+
T Consensus 302 ~~~l~~~ 308 (348)
T 3two_A 302 MVDFSIK 308 (348)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7777764
No 258
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=89.68 E-value=0.37 Score=38.77 Aligned_cols=88 Identities=18% Similarity=0.210 Sum_probs=51.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
+||+|+|+|.+|+.+++.+.... .+++.+ |. +.+.+..+.++ | +. . .. ..+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~-~~--~~~~~~~~~~~----------------g--~~--~---~~--~~~ 51 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRG-HYLIGV-SR--QQSTCEKAVER----------------Q--LV--D---EA--GQD 51 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS--CHHHHHHHHHT----------------T--SC--S---EE--ESC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCC-CEEEEE-EC--CHHHHHHHHhC----------------C--CC--c---cc--cCC
Confidence 38999999999999999988764 676555 55 34443332211 1 00 0 01 123
Q ss_pred CCCCCcccCCccEEEeecCcccCHHhHHHH---HhCCCcEEEEeCC
Q 029791 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAH---LKGGAKKVIISAP 126 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h---~~~Gakkviis~p 126 (188)
++++ .+.|+|+.|++.....+..... ++.|+ +|++..
T Consensus 52 ~~~~----~~~D~vi~av~~~~~~~~~~~l~~~~~~~~--~vv~~~ 91 (279)
T 2f1k_A 52 LSLL----QTAKIIFLCTPIQLILPTLEKLIPHLSPTA--IVTDVA 91 (279)
T ss_dssp GGGG----TTCSEEEECSCHHHHHHHHHHHGGGSCTTC--EEEECC
T ss_pred HHHh----CCCCEEEEECCHHHHHHHHHHHHhhCCCCC--EEEECC
Confidence 3333 2689999999976544444332 23344 777663
No 259
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=89.56 E-value=2 Score=35.59 Aligned_cols=130 Identities=14% Similarity=0.097 Sum_probs=70.7
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
-+|.|+|.|.+|...++.+......+++++.- +.+.+..+.++ |. + -.++- .+
T Consensus 173 ~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~---~~~~~~~~~~l----Ga-----------~-~~i~~--------~~ 225 (345)
T 3jv7_A 173 STAVVIGVGGLGHVGIQILRAVSAARVIAVDL---DDDRLALAREV----GA-----------D-AAVKS--------GA 225 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCEEEEEES---CHHHHHHHHHT----TC-----------S-EEEEC--------ST
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC---CHHHHHHHHHc----CC-----------C-EEEcC--------CC
Confidence 47899999999999888776654577777743 33444333321 11 0 11110 00
Q ss_pred CCCCCc--------ccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCCCCeEEeecCccCCCCCCceEEcCChh
Q 029791 84 PEEIPW--------AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCT 155 (188)
Q Consensus 84 p~~~~w--------~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d~p~~V~gvN~~~~~~~~~iis~~sCt 155 (188)
+| +..++|+||||+|...+.+.+-..++.|-+ +++-+.....+.- ++...+.....+...-.-+
T Consensus 226 ----~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~-iv~~G~~~~~~~~---~~~~~~~~~~~i~g~~~~~ 297 (345)
T 3jv7_A 226 ----GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGH-ISVVGIHAGAHAK---VGFFMIPFGASVVTPYWGT 297 (345)
T ss_dssp ----THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEE-EEECSCCTTCCEE---ESTTTSCTTCEEECCCSCC
T ss_pred ----cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCE-EEEECCCCCCCCC---cCHHHHhCCCEEEEEecCC
Confidence 12 123899999999976555666667765553 3333332221221 2223333334444443334
Q ss_pred hHhHHHHHHHHHh
Q 029791 156 TNCLAPLAKVIHD 168 (188)
Q Consensus 156 T~~lap~l~~l~~ 168 (188)
...+..+++.+.+
T Consensus 298 ~~~~~~~~~l~~~ 310 (345)
T 3jv7_A 298 RSELMEVVALARA 310 (345)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 4566677777665
No 260
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=89.55 E-value=1 Score=37.76 Aligned_cols=34 Identities=26% Similarity=0.386 Sum_probs=25.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~ 37 (188)
|||+|+|.|.+|..++..+...+-+.-+.+.|..
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 34 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIK 34 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCc
Confidence 4899999999999999888766534344555653
No 261
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=89.54 E-value=0.34 Score=40.30 Aligned_cols=35 Identities=31% Similarity=0.403 Sum_probs=29.1
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
|+++||.|.| .|.||+.+++.+.+.++.+|+++.-
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r 57 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDM 57 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEES
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeC
Confidence 4457999999 7999999999998875688888864
No 262
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=89.32 E-value=0.38 Score=42.35 Aligned_cols=41 Identities=17% Similarity=0.386 Sum_probs=29.8
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhh
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l 46 (188)
|+ +||+|+|+|.+|..++..+.+. +.+++++ |. +.+.+..+
T Consensus 1 M~-mkI~VIG~G~vG~~lA~~La~~-G~~V~~~-D~--~~~~v~~l 41 (450)
T 3gg2_A 1 MS-LDIAVVGIGYVGLVSATCFAEL-GANVRCI-DT--DRNKIEQL 41 (450)
T ss_dssp -C-CEEEEECCSHHHHHHHHHHHHT-TCEEEEE-CS--CHHHHHHH
T ss_pred CC-CEEEEECcCHHHHHHHHHHHhc-CCEEEEE-EC--CHHHHHHH
Confidence 54 7999999999999999988876 4777755 44 44444333
No 263
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=89.28 E-value=0.43 Score=37.18 Aligned_cols=30 Identities=20% Similarity=0.257 Sum_probs=23.8
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEE
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaI 33 (188)
++||+|+|+|.+|..+++.+.+.. .+++.+
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g-~~V~~~ 48 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAG-HEVTYY 48 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEE
Confidence 369999999999999999887664 565544
No 264
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=89.27 E-value=0.37 Score=43.26 Aligned_cols=34 Identities=41% Similarity=0.742 Sum_probs=27.3
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCc
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIT 39 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~ 39 (188)
.+|||+|+|+||+.+++.+... ++++++. |+..+
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~-G~~V~~~-d~~~~ 176 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAF-GAYVVAY-DPYVS 176 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEE-CTTSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-CCEEEEE-CCCCC
Confidence 6899999999999999998866 4787665 55433
No 265
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=88.87 E-value=0.53 Score=39.15 Aligned_cols=35 Identities=26% Similarity=0.317 Sum_probs=27.7
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEecCC
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~ 37 (188)
|+ +||+|+|.|.+|..++..+...+.++ +.+.|..
T Consensus 1 M~-~kI~VIGaG~vG~~~a~~la~~g~~~-v~L~Di~ 35 (309)
T 1ur5_A 1 MR-KKISIIGAGFVGSTTAHWLAAKELGD-IVLLDIV 35 (309)
T ss_dssp -C-CEEEEECCSHHHHHHHHHHHHTTCSE-EEEECSS
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHCCCCe-EEEEeCC
Confidence 54 79999999999999988887766457 7777763
No 266
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=88.58 E-value=0.58 Score=37.15 Aligned_cols=32 Identities=13% Similarity=0.234 Sum_probs=24.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
+||+|+|+|.+|+.+++.+...+..++ .+.|.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v-~~~~r 32 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRI-YIANR 32 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEE-EEECS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeE-EEECC
Confidence 389999999999999998876531444 45565
No 267
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=88.38 E-value=0.63 Score=35.70 Aligned_cols=30 Identities=20% Similarity=0.354 Sum_probs=24.7
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
+||+|+| .|.+|+.+++.+.+.+ .+++.++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g-~~V~~~~ 31 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG-HEIVVGS 31 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-CEEEEEE
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 3899999 9999999999988764 6766654
No 268
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=88.29 E-value=0.37 Score=39.05 Aligned_cols=31 Identities=23% Similarity=0.580 Sum_probs=24.7
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
+||+|+|+|.+|+.+++.+...+ .+++ +.|.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g-~~V~-~~~~ 31 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHG-YPLI-IYDV 31 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTT-CCEE-EECS
T ss_pred CeEEEEeccHHHHHHHHHHHHCC-CEEE-EEeC
Confidence 38999999999999999988764 6755 4454
No 269
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=88.17 E-value=0.63 Score=38.67 Aligned_cols=33 Identities=12% Similarity=0.024 Sum_probs=27.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
++|+|+|+|.+|+.+++++....+++-|.+.|.
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr 168 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNR 168 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred cEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 689999999999999999876534766777776
No 270
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=87.97 E-value=0.18 Score=40.83 Aligned_cols=33 Identities=15% Similarity=0.196 Sum_probs=27.7
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.+||+|+|.|.+|..+++.+... +.++++++.+
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~-G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSV-GHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHT-TCEEEECSSG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHC-CCEEEEecCH
Confidence 47999999999999999999876 4788877653
No 271
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=87.96 E-value=0.51 Score=38.78 Aligned_cols=29 Identities=31% Similarity=0.515 Sum_probs=23.7
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEE
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAV 33 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaI 33 (188)
.||+|+| +|.||..+++.+.... .+++.+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G-~~V~~~ 51 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASG-YPISIL 51 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTT-CCEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCC-CeEEEE
Confidence 5899999 9999999999987664 565544
No 272
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=87.95 E-value=0.78 Score=39.40 Aligned_cols=36 Identities=17% Similarity=0.446 Sum_probs=29.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhh
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~ 43 (188)
.+|+|.|+|.+|+.+++.+.+. +.+++ +.|+ +++.+
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~-GakVv-v~D~--~~~~l 209 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTE-GAKLV-VTDV--NKAAV 209 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEE-EECS--CHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHC-CCEEE-EEcC--CHHHH
Confidence 5899999999999999999877 47887 8887 44433
No 273
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=87.83 E-value=0.51 Score=40.27 Aligned_cols=33 Identities=27% Similarity=0.369 Sum_probs=25.2
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
|+ +||+|+|.|.+|..++..+....+.+++.+.
T Consensus 1 ~~-mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 1 MT-VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp -C-EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred CC-ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 44 7999999999999998887654357766554
No 274
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=87.82 E-value=0.33 Score=40.43 Aligned_cols=25 Identities=28% Similarity=0.437 Sum_probs=20.8
Q ss_pred CCccEEEEEccChHHHHHHHHHHcC
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQR 25 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~ 25 (188)
|+++||+|+|.|.+|..++..+...
T Consensus 6 m~~mkI~iIG~G~mG~~~a~~l~~~ 30 (354)
T 1x0v_A 6 MASKKVCIVGSGNWGSAIAKIVGGN 30 (354)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhc
Confidence 5457999999999999999888754
No 275
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=87.66 E-value=0.84 Score=34.11 Aligned_cols=34 Identities=26% Similarity=0.282 Sum_probs=28.1
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
|+.+||.|.| .|.||+.+++.+.+.+ .+++++.-
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r 35 (206)
T 1hdo_A 1 MAVKKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVR 35 (206)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEe
Confidence 6557999999 6999999999998874 78777754
No 276
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=87.65 E-value=0.61 Score=37.30 Aligned_cols=30 Identities=23% Similarity=0.355 Sum_probs=24.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
+||+|+|.|.+|..+++.+.+.+ .+++.++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~ 30 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQG-HEVQGWL 30 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CeEEEECcCHHHHHHHHHHHhCC-CCEEEEE
Confidence 38999999999999999888764 5766654
No 277
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=87.63 E-value=1.9 Score=36.45 Aligned_cols=34 Identities=32% Similarity=0.412 Sum_probs=26.5
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.+||+|+|.|.+|..++..+...+-..-+.+.|.
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di 52 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDV 52 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeC
Confidence 4799999999999998888887654444556665
No 278
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=87.48 E-value=0.58 Score=41.93 Aligned_cols=31 Identities=13% Similarity=0.224 Sum_probs=25.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.+|+|+|+|+||+.+++.+... ++++++. |+
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~-G~~V~v~-d~ 308 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGL-GATVWVT-EI 308 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEE-CS
T ss_pred CEEEEEccCHHHHHHHHHHHHC-CCEEEEE-eC
Confidence 5899999999999999998866 4776554 55
No 279
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=87.46 E-value=2.4 Score=35.27 Aligned_cols=93 Identities=16% Similarity=0.200 Sum_probs=50.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeec
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~-~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
-+|.|+|.|.+|...++.+.... . +++++. . +.+.+..+.++ |. + -.++-+.-.+ . .
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~-~--~~~~~~~~~~l----Ga----~--------~vi~~~~~~~-~-~ 225 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGANHLG-AGRIFAVG-S--RKHCCDIALEY----GA----T--------DIINYKNGDI-V-E 225 (352)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT-CSSEEEEC-C--CHHHHHHHHHH----TC----C--------EEECGGGSCH-H-H
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CcEEEEEC-C--CHHHHHHHHHh----CC----c--------eEEcCCCcCH-H-H
Confidence 36899999999999888777654 5 677754 3 33433333221 10 0 1111000000 0 0
Q ss_pred CCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCc
Q 029791 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAK 119 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gak 119 (188)
...++. ...++|+||||+|.-.+.+.+-..++.|-+
T Consensus 226 ~v~~~t-~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~ 261 (352)
T 3fpc_A 226 QILKAT-DGKGVDKVVIAGGDVHTFAQAVKMIKPGSD 261 (352)
T ss_dssp HHHHHT-TTCCEEEEEECSSCTTHHHHHHHHEEEEEE
T ss_pred HHHHHc-CCCCCCEEEECCCChHHHHHHHHHHhcCCE
Confidence 000000 123799999999975555666667776653
No 280
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=87.15 E-value=0.11 Score=40.55 Aligned_cols=30 Identities=23% Similarity=0.242 Sum_probs=23.4
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEE
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaI 33 (188)
.+||+|+|+|.+|+.+++.+.... .+++..
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G-~~V~~~ 48 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCG-YSVVFG 48 (201)
Confidence 479999999999999999887653 554433
No 281
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=87.13 E-value=0.6 Score=39.16 Aligned_cols=40 Identities=20% Similarity=0.129 Sum_probs=28.7
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhh
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l 46 (188)
+.||+|+|.|.+|..++..+... +++++. .|+ +.+.+..+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~-G~~V~l-~d~--~~~~~~~~ 45 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG-GFRVKL-YDI--EPRQITGA 45 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-TCCEEE-ECS--CHHHHHHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHC-CCEEEE-EeC--CHHHHHHH
Confidence 46899999999999999988876 467554 465 44444333
No 282
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=87.09 E-value=0.75 Score=37.61 Aligned_cols=32 Identities=22% Similarity=0.228 Sum_probs=25.4
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
+.||+|+|.|.+|..++..+... +.+++. .|.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~-G~~V~~-~d~ 46 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT-GHTVVL-VDQ 46 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEE-ECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCeEEE-EEC
Confidence 35899999999999999988876 477654 454
No 283
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=86.92 E-value=0.73 Score=39.52 Aligned_cols=32 Identities=22% Similarity=0.434 Sum_probs=28.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~ 37 (188)
.+|+|.|||.||+.+++.+.+. +.+|+ +.|+.
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~-GakVv-vsD~~ 207 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEA-GAQLL-VADTD 207 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEE-EEeCC
Confidence 5899999999999999988877 58888 88974
No 284
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=86.80 E-value=1.5 Score=41.20 Aligned_cols=143 Identities=18% Similarity=0.329 Sum_probs=76.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhh-------hhhhhcccccCcCCCcceEEeCCCeeEECCEEE
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM-------TYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPV 76 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~-------~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i 76 (188)
.||||+|.|.+|+.++..+... +++++ +.|+. .+.+ ...++-....++.. .. .. . . ..+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~a-G~~V~-l~D~~--~~~l~~~~~~i~~~l~~~~~~~~~~-~~-----~~-~-~--~~~ 382 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARV-GISVV-AVESD--PKQLDAAKKIITFTLEKEASRAHQN-GQ-----AS-A-K--PKL 382 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEE-EECSS--HHHHHHHHHHHHHHHHHHHHHHHTT-TC-----CC-C-C--CCE
T ss_pred cEEEEEcccHHHHHHHHHHHhC-CCchh-cccch--HhhhhhHHHHHHHHHHHHHHhcccc-ch-----hh-h-h--hhh
Confidence 5899999999999998877765 57755 45653 2222 11111110011111 00 00 0 0 112
Q ss_pred EEEeecCCCCCCcccCCccEEEeecCcccCHH-----hHHHHHhCCCcEEEEeCCCC----------CCCeEEeecCccC
Q 029791 77 TVFGVRNPEEIPWAETGAEYVVESTGVFTDKD-----KAAAHLKGGAKKVIISAPSK----------DAPMFVVGVNENE 141 (188)
Q Consensus 77 ~v~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~-----~~~~h~~~Gakkviis~ps~----------d~p~~V~gvN~~~ 141 (188)
.. ..+.+.+ .++|+|+||...-...+ ....+...++ ++-|+.|. +.|-=+.|. +.
T Consensus 383 ~~--~~~~~~l----~~aDlVIEAV~E~l~iK~~vf~~le~~~~~~a--IlASNTSsl~i~~ia~~~~~p~r~ig~--HF 452 (742)
T 3zwc_A 383 RF--SSSTKEL----STVDLVVEAVFEDMNLKKKVFAELSALCKPGA--FLCTNTSALNVDDIASSTDRPQLVIGT--HF 452 (742)
T ss_dssp EE--ESCGGGG----GSCSEEEECCCSCHHHHHHHHHHHHHHSCTTC--EEEECCSSSCHHHHHTTSSCGGGEEEE--EC
T ss_pred cc--cCcHHHH----hhCCEEEEeccccHHHHHHHHHHHhhcCCCCc--eEEecCCcCChHHHHhhcCCccccccc--cc
Confidence 22 2334443 38999999987655543 2345555667 66677652 234222232 33
Q ss_pred CCCC-----CceEEcCChhhHhHHHHHHHHHhhcC
Q 029791 142 YKPE-----LNIVSNASCTTNCLAPLAKVIHDKFG 171 (188)
Q Consensus 142 ~~~~-----~~iis~~sCtT~~lap~l~~l~~~~g 171 (188)
+.|. -.||..+..+-..++.+..... ..|
T Consensus 453 fnP~~~m~LVEvi~g~~Ts~e~~~~~~~~~~-~lg 486 (742)
T 3zwc_A 453 FSPAHVMRLLEVIPSRYSSPTTIATVMSLSK-KIG 486 (742)
T ss_dssp CSSTTTCCEEEEEECSSCCHHHHHHHHHHHH-HTT
T ss_pred cCCCCCCceEEEecCCCCCHHHHHHHHHHHH-HhC
Confidence 3331 3578888777777777776554 445
No 285
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=86.63 E-value=0.86 Score=39.59 Aligned_cols=36 Identities=31% Similarity=0.719 Sum_probs=29.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhh
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~ 43 (188)
.+|-|.|+||+|+.+++.|.+. +.++++|.. +++.+
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~-g~~vvvId~---d~~~v 40 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS-GVKMVVLDH---DPDHI 40 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEEEC---CHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCCEEEEEC---CHHHH
Confidence 5799999999999999999876 488888853 45544
No 286
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=86.56 E-value=0.69 Score=41.18 Aligned_cols=32 Identities=22% Similarity=0.343 Sum_probs=26.7
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCc-eEEEEe
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~-~ivaIn 34 (188)
++||+|+|+|.+|..++..+.+.++. +++.++
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D 50 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQ 50 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEE
Confidence 47999999999999999988877457 777664
No 287
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=86.44 E-value=1.7 Score=37.07 Aligned_cols=26 Identities=31% Similarity=0.563 Sum_probs=20.3
Q ss_pred CCccEEEEEcc-ChHHHHHHHHHHcCC
Q 029791 1 MGKVKIGINGF-GRIGRLVARVILQRD 26 (188)
Q Consensus 1 m~~~kvgI~G~-GriGr~~~r~~~~~~ 26 (188)
|..+||+|.|. |.||..++-.+...+
T Consensus 22 ~~~vKVaViGAaG~IG~~la~~la~~~ 48 (345)
T 4h7p_A 22 MSAVKVAVTGAAGQIGYALVPLIARGA 48 (345)
T ss_dssp CCCEEEEEESTTSHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECcCcHHHHHHHHHHHhcc
Confidence 45689999995 999998877665543
No 288
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=86.36 E-value=0.75 Score=38.41 Aligned_cols=35 Identities=20% Similarity=0.230 Sum_probs=26.2
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 2 ~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
+++||+|+|.|.+|..++..+...+-+.-+.+.|.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di 39 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDL 39 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 35799999999999998887776543444555665
No 289
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=86.35 E-value=0.64 Score=39.07 Aligned_cols=31 Identities=23% Similarity=0.319 Sum_probs=25.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
+||+|+|+|.+|+.+++.+...+ ++++. .|.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G-~~V~~-~~~ 47 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSG-VDVTV-GLR 47 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCEEE-ECC
T ss_pred CEEEEECchHHHHHHHHHHHHCc-CEEEE-EEC
Confidence 68999999999999999988764 67654 444
No 290
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=86.19 E-value=0.65 Score=39.44 Aligned_cols=36 Identities=17% Similarity=0.211 Sum_probs=27.7
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhh
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~ 43 (188)
.||+|+|+|.||..+++.+...+ .++++. |. +.+.+
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G-~~V~~~-dr--~~~~~ 44 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAAN-HSVFGY-NR--SRSGA 44 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCEEEE-CS--CHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCC-CEEEEE-eC--CHHHH
Confidence 68999999999999999998764 676554 54 44444
No 291
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=86.10 E-value=0.81 Score=38.00 Aligned_cols=31 Identities=16% Similarity=0.320 Sum_probs=25.1
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.+||+|+|.|.+|..+++.+.+.. .+++..+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G-~~V~~~~ 44 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENG-EEVILWA 44 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CCcEEEECcCHHHHHHHHHHHhCC-CeEEEEe
Confidence 589999999999999999888764 5655443
No 292
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=86.04 E-value=0.58 Score=41.76 Aligned_cols=31 Identities=16% Similarity=0.251 Sum_probs=25.3
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.+|+|+|+|+||+.+++.+... ++++++. |+
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~-G~~Viv~-d~ 288 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGL-GARVYIT-EI 288 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-TCEEEEE-CS
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-cCEEEEE-eC
Confidence 5899999999999999988765 4776655 45
No 293
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=85.86 E-value=0.85 Score=37.72 Aligned_cols=33 Identities=21% Similarity=0.340 Sum_probs=25.1
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEec
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
|+ +||+|+|.|.+|..++..+.... .+++.+.-
T Consensus 1 M~-mkI~IiGaGaiG~~~a~~L~~~g-~~V~~~~r 33 (320)
T 3i83_A 1 MS-LNILVIGTGAIGSFYGALLAKTG-HCVSVVSR 33 (320)
T ss_dssp ---CEEEEESCCHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CC-CEEEEECcCHHHHHHHHHHHhCC-CeEEEEeC
Confidence 54 79999999999999998887653 66666543
No 294
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=85.66 E-value=0.54 Score=38.22 Aligned_cols=32 Identities=22% Similarity=0.453 Sum_probs=24.8
Q ss_pred ccEEEEEccChHHHHHHHHHHcCC----C-ceEEEEe
Q 029791 3 KVKIGINGFGRIGRLVARVILQRD----D-VELVAVN 34 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~----~-~~ivaIn 34 (188)
++||+|+|.|.+|..++..+.+.+ + .+++.++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~ 44 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIA 44 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEE
Confidence 369999999999999998887651 3 5666554
No 295
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=85.61 E-value=7.2 Score=31.86 Aligned_cols=31 Identities=16% Similarity=0.204 Sum_probs=25.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
.|+.|+|.|.+||.+++++.+.. .+++.+|-
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G-~~v~V~nR 149 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQG-LQVSVLNR 149 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 48999999999999999998876 67666654
No 296
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=85.35 E-value=0.86 Score=40.21 Aligned_cols=31 Identities=19% Similarity=0.343 Sum_probs=25.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.+|+|+|+|+||+.+++.+.... ++++ +.|+
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~G-a~Vi-v~D~ 242 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFG-ARVV-VTEV 242 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEE-EECC
Confidence 68999999999999999988764 7755 4566
No 297
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=85.28 E-value=1 Score=34.45 Aligned_cols=33 Identities=21% Similarity=0.289 Sum_probs=26.1
Q ss_pred CccEEEEEc-cChHHHHHHHHHH-cCCCceEEEEec
Q 029791 2 GKVKIGING-FGRIGRLVARVIL-QRDDVELVAVND 35 (188)
Q Consensus 2 ~~~kvgI~G-~GriGr~~~r~~~-~~~~~~ivaInd 35 (188)
|+.+|.|.| .|.||+.+++.+. +. +.+++++.-
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~-g~~V~~~~r 38 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYT-DMHITLYGR 38 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHC-CCEEEEEES
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcC-CceEEEEec
Confidence 334599999 7999999999998 54 578877754
No 298
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=85.24 E-value=1.8 Score=36.06 Aligned_cols=86 Identities=23% Similarity=0.182 Sum_probs=54.6
Q ss_pred cEEEEE-cc-ChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEee
Q 029791 4 VKIGIN-GF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 4 ~kvgI~-G~-GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
..++|+ |+ |+.|+.+++.+.+. +++++...+|.. . + +. +.|.+ ++
T Consensus 14 ~siaVV~Gasg~~G~~~~~~l~~~-G~~~v~~VnP~~------------------~-g-------~~--i~G~~--vy-- 60 (305)
T 2fp4_A 14 NTKVICQGFTGKQGTFHSQQALEY-GTNLVGGTTPGK------------------G-G-------KT--HLGLP--VF-- 60 (305)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTC------------------T-T-------CE--ETTEE--EE--
T ss_pred CcEEEEECCCCCHHHHHHHHHHHC-CCcEEEEeCCCc------------------C-c-------ce--ECCee--ee--
Confidence 468888 97 99999999988775 477665555520 0 0 00 22322 21
Q ss_pred cCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEE
Q 029791 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkvii 123 (188)
++.++++- +.++|+++-+++.....+.+...++.|+|.+++
T Consensus 61 ~sl~el~~-~~~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~ 101 (305)
T 2fp4_A 61 NTVKEAKE-QTGATASVIYVPPPFAAAAINEAIDAEVPLVVC 101 (305)
T ss_dssp SSHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred chHHHhhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 12222221 126899999999887777778888899987444
No 299
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=85.02 E-value=0.96 Score=39.76 Aligned_cols=39 Identities=31% Similarity=0.382 Sum_probs=28.7
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhh
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l 46 (188)
++||+|+|+|.+|..++..+.+ +.+++++ |. +.+.+..+
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~--G~~V~~~-D~--~~~~v~~l 74 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ--NHEVVAL-DI--VQAKVDML 74 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TSEEEEE-CS--CHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHc--CCeEEEE-ec--CHHHhhHH
Confidence 4699999999999999887765 5887765 44 45544333
No 300
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=84.96 E-value=0.82 Score=38.49 Aligned_cols=133 Identities=11% Similarity=0.161 Sum_probs=66.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
-+|.|.|.|.||...++.+.... .+++++... .+.+..+.+ . +|. + ..++-.. ...
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~~---~~~~~~~~~--~-lGa----~--------~v~~~~~-----~~~ 244 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAFG-SKVTVISTS---PSKKEEALK--N-FGA----D--------SFLVSRD-----QEQ 244 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEESC---GGGHHHHHH--T-SCC----S--------EEEETTC-----HHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCC---HHHHHHHHH--h-cCC----c--------eEEeccC-----HHH
Confidence 47999999999999998887664 687776532 233322220 0 111 0 1111000 000
Q ss_pred CCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCCCCeEEeecCcc-CCCCCCceEEcCChhhHhHHHH
Q 029791 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEN-EYKPELNIVSNASCTTNCLAPL 162 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d~p~~V~gvN~~-~~~~~~~iis~~sCtT~~lap~ 162 (188)
..++. .++|+||||+|...+.+.+-..++.|.+-|.+..++ .+. .++.. .+.....+...-..+...+.-+
T Consensus 245 ~~~~~---~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~---~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 316 (366)
T 1yqd_A 245 MQAAA---GTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPE--KPL---ELPAFSLIAGRKIVAGSGIGGMKETQEM 316 (366)
T ss_dssp HHHTT---TCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCS--SCE---EECHHHHHTTTCEEEECCSCCHHHHHHH
T ss_pred HHHhh---CCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCC--CCC---CcCHHHHHhCCcEEEEecCCCHHHHHHH
Confidence 01111 279999999997655555666776555323332222 121 12222 1222334444333334556666
Q ss_pred HHHHHh
Q 029791 163 AKVIHD 168 (188)
Q Consensus 163 l~~l~~ 168 (188)
++.+.+
T Consensus 317 ~~l~~~ 322 (366)
T 1yqd_A 317 IDFAAK 322 (366)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 776654
No 301
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=84.88 E-value=0.93 Score=40.29 Aligned_cols=29 Identities=14% Similarity=0.260 Sum_probs=24.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEE
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaI 33 (188)
.+++|+|+|+||+.+++.+.... +++++.
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafG-a~Viv~ 276 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAG-ARVKVT 276 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEE
Confidence 58999999999999999988764 776544
No 302
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=84.83 E-value=0.94 Score=39.87 Aligned_cols=40 Identities=23% Similarity=0.388 Sum_probs=30.0
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhh
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l 46 (188)
.|||-|.|+|++|+.+++.|.+. +.+++.|.. +.+.+..+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~-~~~v~vId~---d~~~~~~~ 42 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGE-NNDITIVDK---DGDRLREL 42 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCST-TEEEEEEES---CHHHHHHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHC-CCCEEEEEC---CHHHHHHH
Confidence 47999999999999999988655 478777753 44544333
No 303
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=84.82 E-value=1.2 Score=37.19 Aligned_cols=33 Identities=18% Similarity=0.167 Sum_probs=28.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.+++|+|.|.+|+.+++++.....++.+.|.|.
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r 158 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDV 158 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECS
T ss_pred CEEEEEcCcHHHHHHHHHHHHhCCccEEEEECC
Confidence 589999999999999999886445788888887
No 304
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=84.44 E-value=4.8 Score=33.79 Aligned_cols=94 Identities=17% Similarity=0.226 Sum_probs=49.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEe-e
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG-V 81 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~-~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~-~ 81 (188)
-+|.|+|.|.+|...++.+.... . +++++ +. +.+.+..+.++ |- + ..++-+.-.+.+ .
T Consensus 184 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~-~~--~~~~~~~a~~l----Ga----~--------~vi~~~~~~~~~~i 243 (370)
T 4ej6_A 184 STVAILGGGVIGLLTVQLARLAG-ATTVILS-TR--QATKRRLAEEV----GA----T--------ATVDPSAGDVVEAI 243 (370)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEE-CS--CHHHHHHHHHH----TC----S--------EEECTTSSCHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEE-CC--CHHHHHHHHHc----CC----C--------EEECCCCcCHHHHH
Confidence 47899999999999888877664 6 56555 33 33433332221 11 0 111100000000 0
Q ss_pred cCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCc
Q 029791 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAK 119 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gak 119 (188)
.+. ..+...++|+||||+|...+.+.+...++.|-+
T Consensus 244 ~~~--~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~ 279 (370)
T 4ej6_A 244 AGP--VGLVPGGVDVVIECAGVAETVKQSTRLAKAGGT 279 (370)
T ss_dssp HST--TSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEE
T ss_pred Hhh--hhccCCCCCEEEECCCCHHHHHHHHHHhccCCE
Confidence 000 012223899999999965555666667765553
No 305
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=84.37 E-value=0.82 Score=40.39 Aligned_cols=31 Identities=10% Similarity=0.172 Sum_probs=25.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
+||||+|+|.+|..+++.+.+.+ ++++ +.|.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G-~~V~-v~dr 33 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHG-FVVC-AFNR 33 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT-CCEE-EECS
T ss_pred CeEEEEChHHHHHHHHHHHHHCC-CeEE-EEeC
Confidence 68999999999999999998764 6754 4454
No 306
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=84.00 E-value=1.2 Score=37.49 Aligned_cols=94 Identities=14% Similarity=0.216 Sum_probs=53.3
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeec
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
-+|.|+| .|.+|...++.+....+.+++++.. +.+.+.++.+ .|. + .+++-+. .+ . .
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~---~~~~~~~~~~----lGa----d--------~vi~~~~-~~-~-~ 230 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRTDLTVIATAS---RPETQEWVKS----LGA----H--------HVIDHSK-PL-A-A 230 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHCCSEEEEECS---SHHHHHHHHH----TTC----S--------EEECTTS-CH-H-H
T ss_pred CEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeC---CHHHHHHHHH----cCC----C--------EEEeCCC-CH-H-H
Confidence 3689999 8999999888776534578887754 3344433332 121 0 1121100 00 0 0
Q ss_pred CCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEE
Q 029791 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKV 121 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkv 121 (188)
...++ ...++|+||||+|.....+.+...++.|-+-|
T Consensus 231 ~v~~~--~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv 267 (363)
T 4dvj_A 231 EVAAL--GLGAPAFVFSTTHTDKHAAEIADLIAPQGRFC 267 (363)
T ss_dssp HHHTT--CSCCEEEEEECSCHHHHHHHHHHHSCTTCEEE
T ss_pred HHHHh--cCCCceEEEECCCchhhHHHHHHHhcCCCEEE
Confidence 01111 23489999999996545566666777666433
No 307
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=83.97 E-value=0.91 Score=37.23 Aligned_cols=30 Identities=17% Similarity=0.282 Sum_probs=24.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
+||+|+|.|.+|..+++.+.+.. .+++.++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g-~~V~~~~ 30 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNG-NEVRIWG 30 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC-CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC-CeEEEEE
Confidence 38999999999999999887653 5666554
No 308
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=83.92 E-value=1.2 Score=36.98 Aligned_cols=74 Identities=20% Similarity=0.203 Sum_probs=46.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
.||||+|.|.+|..+++.+. . +++++.. |. +++.+..+.+. +. .... + .+ +. ..+
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a-G~~V~v~-d~--~~~~~~~~~~~------l~-~~~~---~-~i-------~~--~~~ 67 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S-KHEVVLQ-DV--SEKALEAAREQ------IP-EELL---S-KI-------EF--TTT 67 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T-TSEEEEE-CS--CHHHHHHHHHH------SC-GGGG---G-GE-------EE--ESS
T ss_pred CeEEEEeeCHHHHHHHHHHH-c-CCEEEEE-EC--CHHHHHHHHHH------HH-HHHh---C-Ce-------EE--eCC
Confidence 69999999999999999998 5 5886655 44 44544444332 01 0000 0 11 11 134
Q ss_pred CCCCCcccCCccEEEeecCcccC
Q 029791 84 PEEIPWAETGAEYVVESTGVFTD 106 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~~~ 106 (188)
++.+ .++|+||||.+.-..
T Consensus 68 ~~~~----~~aDlVieavpe~~~ 86 (293)
T 1zej_A 68 LEKV----KDCDIVMEAVFEDLN 86 (293)
T ss_dssp CTTG----GGCSEEEECCCSCHH
T ss_pred HHHH----cCCCEEEEcCcCCHH
Confidence 5433 389999999997654
No 309
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=83.89 E-value=3.5 Score=34.38 Aligned_cols=129 Identities=16% Similarity=0.179 Sum_probs=66.3
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
-+|.|.|.|.+|...++.+... +.+++++.-. .+.+..+.+ +|. + ..++ ..+
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~---~~~~~~~~~----lGa-----------~-~v~~--------~~~ 232 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAM-GAETYVISRS---SRKREDAMK----MGA-----------D-HYIA--------TLE 232 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEEESS---STTHHHHHH----HTC-----------S-EEEE--------GGG
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCC---HHHHHHHHH----cCC-----------C-EEEc--------CcC
Confidence 4799999999999988877655 4677777532 222222221 110 0 1111 011
Q ss_pred C----CCCCcccCCccEEEeecCc--ccCHHhHHHHHhCCCcEEEEeCCCCCCCeEEeecCcc-CCCCCCceEEcCChhh
Q 029791 84 P----EEIPWAETGAEYVVESTGV--FTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEN-EYKPELNIVSNASCTT 156 (188)
Q Consensus 84 p----~~~~w~~~~vdiV~e~tg~--~~~~~~~~~h~~~Gakkviis~ps~d~p~~V~gvN~~-~~~~~~~iis~~sCtT 156 (188)
+ +.+. .++|+||||+|. ..+.+.+-..++.|-+ ++.-+.....+. ++.. .+..+..+...-..+.
T Consensus 233 ~~~~~~~~~---~~~D~vid~~g~~~~~~~~~~~~~l~~~G~-iv~~g~~~~~~~----~~~~~~~~~~~~i~g~~~~~~ 304 (360)
T 1piw_A 233 EGDWGEKYF---DTFDLIVVCASSLTDIDFNIMPKAMKVGGR-IVSISIPEQHEM----LSLKPYGLKAVSISYSALGSI 304 (360)
T ss_dssp TSCHHHHSC---SCEEEEEECCSCSTTCCTTTGGGGEEEEEE-EEECCCCCSSCC----EEECGGGCBSCEEEECCCCCH
T ss_pred chHHHHHhh---cCCCEEEECCCCCcHHHHHHHHHHhcCCCE-EEEecCCCCccc----cCHHHHHhCCeEEEEEecCCH
Confidence 1 0111 379999999997 4444555556665543 333232211211 2211 2222344554444445
Q ss_pred HhHHHHHHHHHh
Q 029791 157 NCLAPLAKVIHD 168 (188)
Q Consensus 157 ~~lap~l~~l~~ 168 (188)
..+..+++.+.+
T Consensus 305 ~~~~~~~~l~~~ 316 (360)
T 1piw_A 305 KELNQLLKLVSE 316 (360)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 667777777765
No 310
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=83.87 E-value=1.8 Score=36.33 Aligned_cols=35 Identities=31% Similarity=0.413 Sum_probs=26.4
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
|+++||+|+|.|.+|..++..+...+-.+ +.+.|.
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~-v~l~Di 37 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGD-VVLFDI 37 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCce-EEEEeC
Confidence 65689999999999999988887664225 445565
No 311
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=83.87 E-value=1.4 Score=35.62 Aligned_cols=33 Identities=24% Similarity=0.420 Sum_probs=27.2
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
|+ +||.|.| .|.||+.+++.+.+.+ .+++++.-
T Consensus 1 M~-~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 34 (311)
T 3m2p_A 1 MS-LKIAVTGGTGFLGQYVVESIKNDG-NTPIILTR 34 (311)
T ss_dssp -C-CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CC-CEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeC
Confidence 54 7999999 7999999999998874 68777764
No 312
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=83.58 E-value=0.84 Score=37.59 Aligned_cols=33 Identities=18% Similarity=0.335 Sum_probs=24.0
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEec
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
|+ +||+|+|.|.+|..++..+...+ .+++.+.-
T Consensus 1 M~-mkI~IiGaGaiG~~~a~~L~~~g-~~V~~~~r 33 (312)
T 3hn2_A 1 MS-LRIAIVGAGALGLYYGALLQRSG-EDVHFLLR 33 (312)
T ss_dssp ----CEEEECCSTTHHHHHHHHHHTS-CCEEEECS
T ss_pred CC-CEEEEECcCHHHHHHHHHHHHCC-CeEEEEEc
Confidence 54 79999999999999988887653 56655543
No 313
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=83.54 E-value=0.65 Score=37.96 Aligned_cols=31 Identities=23% Similarity=0.314 Sum_probs=22.5
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEE
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaI 33 (188)
|+ +||+|+|.|.+|..++..+.+.. .+++.+
T Consensus 1 M~-mkI~iiGaGa~G~~~a~~L~~~g-~~V~~~ 31 (294)
T 3g17_A 1 MS-LSVAIIGPGAVGTTIAYELQQSL-PHTTLI 31 (294)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHHC-TTCEEE
T ss_pred CC-cEEEEECCCHHHHHHHHHHHHCC-CeEEEE
Confidence 54 79999999999999888877543 344444
No 314
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=83.48 E-value=1.1 Score=36.32 Aligned_cols=35 Identities=31% Similarity=0.578 Sum_probs=27.5
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCC-CceEEEEec
Q 029791 1 MGKVKIGING-FGRIGRLVARVILQRD-DVELVAVND 35 (188)
Q Consensus 1 m~~~kvgI~G-~GriGr~~~r~~~~~~-~~~ivaInd 35 (188)
|+.+||-|-| .|.||+.+++.+.+.+ +.+++++..
T Consensus 1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r 37 (336)
T 2hun_A 1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDK 37 (336)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred CCCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 6667999999 7999999999998764 478887753
No 315
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=83.47 E-value=0.92 Score=40.09 Aligned_cols=31 Identities=23% Similarity=0.467 Sum_probs=24.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
|||||+|+|.+|+.+++.+.+.+ .+++ +.|.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G-~~V~-v~dr 32 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKG-FKVA-VFNR 32 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT-CCEE-EECS
T ss_pred CEEEEEChHHHHHHHHHHHHHCC-CEEE-EEeC
Confidence 58999999999999999998764 6755 4454
No 316
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=83.42 E-value=1.8 Score=33.28 Aligned_cols=35 Identities=14% Similarity=0.224 Sum_probs=28.7
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCC-CceEEEEec
Q 029791 1 MGKVKIGING-FGRIGRLVARVILQRD-DVELVAVND 35 (188)
Q Consensus 1 m~~~kvgI~G-~GriGr~~~r~~~~~~-~~~ivaInd 35 (188)
|++++|-|.| .|.||+.+++.+.+.+ +.+++++.-
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r 38 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR 38 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEES
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 3457899999 7999999999999875 588887753
No 317
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=83.25 E-value=1.6 Score=35.69 Aligned_cols=30 Identities=20% Similarity=0.352 Sum_probs=25.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
-+|.|+|.|.+|...++.+.... .+++++.
T Consensus 144 ~~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~ 173 (315)
T 3goh_A 144 REVLIVGFGAVNNLLTQMLNNAG-YVVDLVS 173 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CEEEEEE
Confidence 47999999999999888777654 6888887
No 318
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=83.10 E-value=1.9 Score=36.18 Aligned_cols=34 Identities=35% Similarity=0.424 Sum_probs=26.9
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~ 37 (188)
++||+|+|.|.+|..++..+...+.++ |.+.|..
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~-V~L~Di~ 47 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGD-VYMFDII 47 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEECC
Confidence 369999999999999888877665337 7777764
No 319
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=82.97 E-value=0.79 Score=40.37 Aligned_cols=94 Identities=19% Similarity=0.209 Sum_probs=53.7
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCE--EEEEEee
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK--PVTVFGV 81 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~--~i~v~~~ 81 (188)
.+|-|.|-|+||..+++.+.+ +.++.-|-. +.+...+|.. .++ +.++++|. ...++.+
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~~--~~~v~iIE~---d~~r~~~la~------~l~---------~~~Vi~GD~td~~~L~e 295 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLEQ--TYSVKLIER---NLQRAEKLSE------ELE---------NTIVFCGDAADQELLTE 295 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHTT--TSEEEEEES---CHHHHHHHHH------HCT---------TSEEEESCTTCHHHHHH
T ss_pred cEEEEEcchHHHHHHHHHhhh--cCceEEEec---CHHHHHHHHH------HCC---------CceEEeccccchhhHhh
Confidence 489999999999999998754 366666643 3333322211 011 13445432 2223332
Q ss_pred cCCCCCCcccCCccEEEeecCcccCHHhHH-HHHhCCCcEEEEe
Q 029791 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAA-AHLKGGAKKVIIS 124 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~-~h~~~Gakkviis 124 (188)
. .+ ...|+++-+|+....-=.+. .+.+.|++|+|.-
T Consensus 296 e---~i----~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa~ 332 (461)
T 4g65_A 296 E---NI----DQVDVFIALTNEDETNIMSAMLAKRMGAKKVMVL 332 (461)
T ss_dssp T---TG----GGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred c---Cc----hhhcEEEEcccCcHHHHHHHHHHHHcCCcccccc
Confidence 2 22 26799999999754332222 3335799987653
No 320
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=82.96 E-value=1.6 Score=36.95 Aligned_cols=30 Identities=27% Similarity=0.477 Sum_probs=26.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.||+|+|.|.+|+.+++++.+. ++++++++
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~-G~~vi~~d 44 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEM-GYKIAVLD 44 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEe
Confidence 5899999999999999999876 58988885
No 321
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=82.55 E-value=1.6 Score=36.03 Aligned_cols=36 Identities=28% Similarity=0.341 Sum_probs=27.0
Q ss_pred CC-ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCC
Q 029791 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 1 m~-~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~ 37 (188)
|+ ++||+|+|.|.+|..++..+...+..+ |.+.|..
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~~g~~~-V~l~D~~ 37 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGKDNLAD-VVLFDIA 37 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTCCE-EEEECSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCce-EEEEeCC
Confidence 53 369999999999999998887654226 5566663
No 322
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=82.40 E-value=6 Score=32.45 Aligned_cols=94 Identities=15% Similarity=0.156 Sum_probs=50.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
-+|.|.|.|-+|...++.+.... ...+.+.|. +.+.+.++.++ |.- ..+...+.+ . . +.+
T Consensus 162 ~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~--~~~k~~~a~~l----Ga~--~~i~~~~~~-~--~-~~~------- 221 (346)
T 4a2c_A 162 KNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDI--SSEKLALAKSF----GAM--QTFNSSEMS-A--P-QMQ------- 221 (346)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CSEEEEEES--CHHHHHHHHHT----TCS--EEEETTTSC-H--H-HHH-------
T ss_pred CEEEEECCCCcchHHHHHHHHcC-CcEEEEEec--hHHHHHHHHHc----CCe--EEEeCCCCC-H--H-HHH-------
Confidence 47899999999999888777664 444444454 34444333321 210 001100000 0 0 000
Q ss_pred CCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCc
Q 029791 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAK 119 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gak 119 (188)
..+. ...++|+|+||+|...+.+.+-..++.|-+
T Consensus 222 -~~~~-~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~ 255 (346)
T 4a2c_A 222 -SVLR-ELRFNQLILETAGVPQTVELAVEIAGPHAQ 255 (346)
T ss_dssp -HHHG-GGCSSEEEEECSCSHHHHHHHHHHCCTTCE
T ss_pred -Hhhc-ccCCcccccccccccchhhhhhheecCCeE
Confidence 0000 113789999999976666666666666654
No 323
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=82.38 E-value=1.1 Score=39.78 Aligned_cols=31 Identities=16% Similarity=0.282 Sum_probs=25.5
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
..||||+|+|.+|..+++.+.+.. ++|+..+
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G-~~V~v~d 40 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHG-FTVCAYN 40 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCC-CEEEEEe
Confidence 479999999999999999998764 7765443
No 324
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=82.38 E-value=1.4 Score=37.50 Aligned_cols=30 Identities=27% Similarity=0.304 Sum_probs=23.8
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEE
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaI 33 (188)
++||+|+|.|.+|..++..+.+.. .++...
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G-~~V~l~ 58 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKG-QKVRLW 58 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTT-CCEEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHCC-CeEEEE
Confidence 479999999999999999888663 554433
No 325
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=82.27 E-value=1.8 Score=37.06 Aligned_cols=33 Identities=18% Similarity=0.445 Sum_probs=28.2
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
..||+|+|-|..|+.+++++.+. +++++++.++
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~l-G~~v~~~d~~ 56 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRL-NIQVNVLDAD 56 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TCEEEEEEST
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEECC
Confidence 57999999999999999999876 5888888743
No 326
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=82.20 E-value=1.2 Score=38.60 Aligned_cols=36 Identities=28% Similarity=0.531 Sum_probs=27.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhh
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~ 43 (188)
|||+|+|+|.+|..++..+.+.. .+++++ |. +.+.+
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G-~~V~~~-d~--~~~~~ 36 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARG-HEVIGV-DV--SSTKI 36 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEEEEE-CS--CHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEE-EC--CHHHH
Confidence 38999999999999999888764 676655 54 44444
No 327
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=82.10 E-value=1.6 Score=38.30 Aligned_cols=32 Identities=28% Similarity=0.527 Sum_probs=25.6
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
..||+|+|.|.+|..++..+... +++++.+ |.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~-G~~V~l~-D~ 68 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV-GISVVAV-ES 68 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEE-CS
T ss_pred CCEEEEECcCHHHHHHHHHHHhC-CCeEEEE-EC
Confidence 35899999999999999988766 4776554 55
No 328
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=82.08 E-value=3.8 Score=34.75 Aligned_cols=97 Identities=16% Similarity=0.284 Sum_probs=54.8
Q ss_pred ccEEEEEcc-ChHHHHHHHH--HHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEE--EE
Q 029791 3 KVKIGINGF-GRIGRLVARV--ILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKP--VT 77 (188)
Q Consensus 3 ~~kvgI~G~-GriGr~~~r~--~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~--i~ 77 (188)
..||-|.|+ |+.++.+++. +.++++.++|+..+|...- || +.+.++.+. +.
T Consensus 10 ~tkviV~G~~Gk~~~~ml~~~~~~~r~~~~vVagV~P~~~g------------~~------------~~v~~G~~~~Gvp 65 (334)
T 3mwd_B 10 HTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGD------------HK------------QKFYWGHKEILIP 65 (334)
T ss_dssp TCCEEEESCCHHHHHHHHHHHHHTTCSSCSEEEEECTTSCS------------EE------------EEEEETTEEEEEE
T ss_pred CCeEEEECCchHHHHHHHHhcccccCCCceEEEEEcCCCCC------------cc------------ceEeccCccCCce
Confidence 378999995 8888777766 3466789999999984110 00 011122221 23
Q ss_pred EEeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHh-CCCcEEEE-eC
Q 029791 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLK-GGAKKVII-SA 125 (188)
Q Consensus 78 v~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~-~Gakkvii-s~ 125 (188)
++. +.++++=...++|+++.+++.....+.+...++ +|+|-+|+ |.
T Consensus 66 vy~--sv~ea~~~~p~~DlaVi~vp~~~a~~ai~ea~~~~Gv~~vViiT~ 113 (334)
T 3mwd_B 66 VFK--NMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAE 113 (334)
T ss_dssp EES--SHHHHHHHCTTCCEEEECCCTTTHHHHHHHHTTSTTCCEEEECCS
T ss_pred eeC--CHHHHhhcCCCCcEEEEecCHHHHHHHHHHHHHHCCCCEEEEECC
Confidence 322 222221000157888888876544444445565 78886666 54
No 329
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=81.95 E-value=6.9 Score=32.34 Aligned_cols=87 Identities=17% Similarity=0.047 Sum_probs=50.7
Q ss_pred cEEEEEccChHHHH-HHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeec
Q 029791 4 VKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 4 ~kvgI~G~GriGr~-~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
.||.++|.|.+|.. +++.+.++. .++. +.|....+.....|-+ .| + .+....
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G-~~V~-~~D~~~~~~~~~~L~~----------------~g--i-------~v~~g~ 57 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAG-FEVS-GCDAKMYPPMSTQLEA----------------LG--I-------DVYEGF 57 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTT-CEEE-EEESSCCTTHHHHHHH----------------TT--C-------EEEESC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCC-CEEE-EEcCCCCcHHHHHHHh----------------CC--C-------EEECCC
Confidence 58999999999995 777777764 6654 4554322222212210 11 1 111224
Q ss_pred CCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCc
Q 029791 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAK 119 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gak 119 (188)
+++++.+ .++|+|+-+.|.-.+.+......+.|.+
T Consensus 58 ~~~~l~~--~~~d~vV~Spgi~~~~p~~~~a~~~gi~ 92 (326)
T 3eag_A 58 DAAQLDE--FKADVYVIGNVAKRGMDVVEAILNLGLP 92 (326)
T ss_dssp CGGGGGS--CCCSEEEECTTCCTTCHHHHHHHHTTCC
T ss_pred CHHHcCC--CCCCEEEECCCcCCCCHHHHHHHHcCCc
Confidence 4554431 2579999998876666555666667773
No 330
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=81.68 E-value=1.5 Score=38.65 Aligned_cols=31 Identities=10% Similarity=0.262 Sum_probs=25.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.+|+|+|+|+||+.+++.+... ++++++ .|.
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~-Ga~Viv-~D~ 251 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAM-GSIVYV-TEI 251 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEE-ECS
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEE-EeC
Confidence 5899999999999999998876 477554 554
No 331
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=81.56 E-value=1.5 Score=38.76 Aligned_cols=32 Identities=16% Similarity=0.253 Sum_probs=26.5
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
+.||.|.|.|.+|+.+++.+.+.++++++.++
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~ 54 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAANDDINVTVAC 54 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEE
T ss_pred CCEEEEECChHHHHHHHHHHHhCCCCeEEEEE
Confidence 36899999999999999999987667755554
No 332
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=81.55 E-value=6.6 Score=33.27 Aligned_cols=30 Identities=17% Similarity=0.246 Sum_probs=23.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~-~ivaIn 34 (188)
-+|.|+|.|.+|...++.+.... . +++++.
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 245 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKHAG-ASKVILSE 245 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 37999999999999888877664 6 677664
No 333
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=81.29 E-value=1.4 Score=37.89 Aligned_cols=28 Identities=25% Similarity=0.406 Sum_probs=23.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEE
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaI 33 (188)
|||+|+|+|.+|..++..+.+ +.+++++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~--G~~V~~~ 28 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL--QNEVTIV 28 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT--TSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHhC--CCEEEEE
Confidence 389999999999999888876 4787666
No 334
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=81.21 E-value=1.4 Score=39.17 Aligned_cols=39 Identities=18% Similarity=0.277 Sum_probs=28.6
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhh
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTY 45 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~ 45 (188)
..||||+|.|.+|..+++.+... +++++. .|. +.+.+..
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~a-G~~V~l-~D~--~~e~l~~ 43 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASH-GHQVLL-YDI--SAEALTR 43 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEE-ECS--CHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCeEEE-EEC--CHHHHHH
Confidence 35899999999999999988876 467554 455 4444433
No 335
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=81.19 E-value=1.5 Score=35.19 Aligned_cols=30 Identities=27% Similarity=0.254 Sum_probs=24.5
Q ss_pred EEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 5 KIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 5 kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
|++|+|+|.+|+.+++.+.+.+ .++ .+.|.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g-~~v-~v~~r 147 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAG-LEV-WVWNR 147 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCE-EEECS
T ss_pred eEEEECCcHHHHHHHHHHHHCC-CEE-EEEEC
Confidence 7999999999999999998765 554 45555
No 336
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=81.11 E-value=2 Score=36.28 Aligned_cols=31 Identities=26% Similarity=0.503 Sum_probs=26.8
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
..+|+|+|.|.+|+.+++++.+. +++++++.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~l-G~~viv~d 42 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKM-GYKVVVLD 42 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEE
Confidence 36899999999999999999877 48888874
No 337
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=80.90 E-value=2.3 Score=35.84 Aligned_cols=133 Identities=10% Similarity=0.130 Sum_probs=64.7
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
-+|.|+|.|.+|...++.+... +.+++++.. +.+.+.++.+ .|. + ..++-+ .+..
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~---~~~~~~~a~~----lGa----~--------~vi~~~-----~~~~ 250 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTT---SEAKREAAKA----LGA----D--------EVVNSR-----NADE 250 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEES---SGGGHHHHHH----HTC----S--------EEEETT-----CHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeC---CHHHHHHHHH----cCC----c--------EEeccc-----cHHH
Confidence 4799999999999998887766 477766653 2233323322 111 0 111100 0000
Q ss_pred CCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCCCCeEEeecCccC-CCCCCceEEcCChhhHhHHHH
Q 029791 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENE-YKPELNIVSNASCTTNCLAPL 162 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d~p~~V~gvN~~~-~~~~~~iis~~sCtT~~lap~ 162 (188)
.+.+. .++|+||||+|...+.+.+...++.|-+ ++.-+.... +. ..++... +..+..+...-..+...+..+
T Consensus 251 ~~~~~---~g~Dvvid~~g~~~~~~~~~~~l~~~G~-iv~~G~~~~-~~--~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 323 (369)
T 1uuf_A 251 MAAHL---KSFDFILNTVAAPHNLDDFTTLLKRDGT-MTLVGAPAT-PH--KSPEVFNLIMKRRAIAGSMIGGIPETQEM 323 (369)
T ss_dssp HHTTT---TCEEEEEECCSSCCCHHHHHTTEEEEEE-EEECCCC----------CHHHHHTTTCEEEECCSCCHHHHHHH
T ss_pred HHHhh---cCCCEEEECCCCHHHHHHHHHHhccCCE-EEEeccCCC-Cc--cccCHHHHHhCCcEEEEeecCCHHHHHHH
Confidence 11121 3799999999976555555555654442 333232111 11 1222211 122334444333334456666
Q ss_pred HHHHHh
Q 029791 163 AKVIHD 168 (188)
Q Consensus 163 l~~l~~ 168 (188)
++.+.+
T Consensus 324 ~~l~~~ 329 (369)
T 1uuf_A 324 LDFCAE 329 (369)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 776654
No 338
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=80.89 E-value=1.4 Score=35.46 Aligned_cols=33 Identities=27% Similarity=0.375 Sum_probs=26.2
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEe
Q 029791 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 1 m~~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
|+++||-|.| .|.||+.+++.+.+.+ .+++++.
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~L~~~g-~~v~~~~ 34 (321)
T 1e6u_A 1 MAKQRVFIAGHRGMVGSAIRRQLEQRG-DVELVLR 34 (321)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCT-TEEEECC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEe
Confidence 6667999999 7999999999998764 6666653
No 339
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=79.99 E-value=3.3 Score=34.21 Aligned_cols=136 Identities=15% Similarity=0.153 Sum_probs=67.3
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeec
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~-~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
-+|.|.|.|.+|...++.+... +. +++++.- +.+.+..+.++ . + ..++-+.-.+ . .
T Consensus 166 ~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~---~~~~~~~~~~l-a--------------~--~v~~~~~~~~-~-~ 222 (343)
T 2dq4_A 166 KSVLITGAGPIGLMAAMVVRAS-GAGPILVSDP---NPYRLAFARPY-A--------------D--RLVNPLEEDL-L-E 222 (343)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCCSEEEECS---CHHHHGGGTTT-C--------------S--EEECTTTSCH-H-H
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCEEEEECC---CHHHHHHHHHh-H--------------H--hccCcCccCH-H-H
Confidence 3689999999999998887766 46 7777643 23333232211 1 0 0111000000 0 0
Q ss_pred CCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCCCCeEEeecCc-c-CCCCCCceEEcCCh-hhHhH
Q 029791 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNE-N-EYKPELNIVSNASC-TTNCL 159 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d~p~~V~gvN~-~-~~~~~~~iis~~sC-tT~~l 159 (188)
...++ ...++|+||||+|...+.+.+-..++.|-+ ++.-+.... +. .+|. . .+.....+...-.. +...+
T Consensus 223 ~~~~~--~~~g~D~vid~~g~~~~~~~~~~~l~~~G~-iv~~g~~~~-~~---~~~~~~~~~~~~~~i~g~~~~~~~~~~ 295 (343)
T 2dq4_A 223 VVRRV--TGSGVEVLLEFSGNEAAIHQGLMALIPGGE-ARILGIPSD-PI---RFDLAGELVMRGITAFGIAGRRLWQTW 295 (343)
T ss_dssp HHHHH--HSSCEEEEEECSCCHHHHHHHHHHEEEEEE-EEECCCCSS-CE---EECHHHHTGGGTCEEEECCSCCTTHHH
T ss_pred HHHHh--cCCCCCEEEECCCCHHHHHHHHHHHhcCCE-EEEEecCCC-Cc---eeCcHHHHHhCceEEEEeecCCCHHHH
Confidence 00000 013799999999964444555556665443 333232221 21 2332 1 22223445443222 45667
Q ss_pred HHHHHHHHhh
Q 029791 160 APLAKVIHDK 169 (188)
Q Consensus 160 ap~l~~l~~~ 169 (188)
..+++.+.+.
T Consensus 296 ~~~~~l~~~g 305 (343)
T 2dq4_A 296 MQGTALVYSG 305 (343)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHcC
Confidence 7777777653
No 340
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=79.87 E-value=8 Score=33.85 Aligned_cols=83 Identities=17% Similarity=0.179 Sum_probs=54.1
Q ss_pred ccEEEEEccC----hHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEE
Q 029791 3 KVKIGINGFG----RIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 3 ~~kvgI~G~G----riGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
..+|+|+|.+ ++|+.+++.+.+.+...+..|| |. ++. +.|.+ +
T Consensus 8 p~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVn-P~-----------~~~-------------------i~G~~--~ 54 (457)
T 2csu_A 8 PKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVN-IK-----------EEE-------------------VQGVK--A 54 (457)
T ss_dssp CSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEEC-SS-----------CSE-------------------ETTEE--C
T ss_pred CCeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEEC-CC-----------CCe-------------------ECCEe--c
Confidence 3579999975 8899999999776445666665 31 011 12222 1
Q ss_pred EeecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEE
Q 029791 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkvii 123 (188)
+ .+.++++ ..+|+++-+++.....+......+.|+|.+++
T Consensus 55 y--~sl~~lp---~~~Dlavi~vp~~~~~~~v~e~~~~Gi~~vv~ 94 (457)
T 2csu_A 55 Y--KSVKDIP---DEIDLAIIVVPKRFVKDTLIQCGEKGVKGVVI 94 (457)
T ss_dssp B--SSTTSCS---SCCSEEEECSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred c--CCHHHcC---CCCCEEEEecCHHHHHHHHHHHHHcCCCEEEE
Confidence 1 3344454 25888888888777777777777888887554
No 341
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=79.81 E-value=2.4 Score=32.10 Aligned_cols=31 Identities=32% Similarity=0.453 Sum_probs=26.2
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
|||.|.| .|.||+.+++.+.+.+ .+++++.-
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g-~~V~~~~R 32 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRG-HEVLAVVR 32 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCC-CEEEEEEe
Confidence 3799999 6999999999998874 78888764
No 342
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=79.64 E-value=4.5 Score=33.77 Aligned_cols=141 Identities=9% Similarity=0.102 Sum_probs=70.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
-+|.|.|.|.+|...++.+... +.+++++.. +.+.+..+.++ |. + ..++...-.+ . ..
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~---~~~~~~~~~~l----Ga----~--------~vi~~~~~~~-~-~~ 248 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKAT-GAEVIVTSS---SREKLDRAFAL----GA----D--------HGINRLEEDW-V-ER 248 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHHT-TCEEEEEES---CHHHHHHHHHH----TC----S--------EEEETTTSCH-H-HH
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEec---CchhHHHHHHc----CC----C--------EEEcCCcccH-H-HH
Confidence 4799999999999988887766 478887753 33444333221 11 0 1111000000 0 00
Q ss_pred CCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCCCCeEEeecCccC-CCCCCceEEcCChhhHhHHHH
Q 029791 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENE-YKPELNIVSNASCTTNCLAPL 162 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d~p~~V~gvN~~~-~~~~~~iis~~sCtT~~lap~ 162 (188)
..++ -...++|+||||+|. .+.+.+-..++.|-+-+++..++.. .. .+|... +.....+...-..+...+..+
T Consensus 249 v~~~-~~g~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~--~~--~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 322 (363)
T 3uog_A 249 VYAL-TGDRGADHILEIAGG-AGLGQSLKAVAPDGRISVIGVLEGF--EV--SGPVGPLLLKSPVVQGISVGHRRALEDL 322 (363)
T ss_dssp HHHH-HTTCCEEEEEEETTS-SCHHHHHHHEEEEEEEEEECCCSSC--EE--CCBTTHHHHTCCEEEECCCCCHHHHHHH
T ss_pred HHHH-hCCCCceEEEECCCh-HHHHHHHHHhhcCCEEEEEecCCCc--cc--CcCHHHHHhCCcEEEEEecCCHHHHHHH
Confidence 0000 012379999999994 4556666677655533333333221 11 122221 112344544444445667777
Q ss_pred HHHHHhhcCce
Q 029791 163 AKVIHDKFGIV 173 (188)
Q Consensus 163 l~~l~~~~gI~ 173 (188)
++.+.+. .++
T Consensus 323 ~~l~~~g-~l~ 332 (363)
T 3uog_A 323 VGAVDRL-GLK 332 (363)
T ss_dssp HHHHHHH-TCC
T ss_pred HHHHHcC-CCc
Confidence 7777653 354
No 343
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=79.21 E-value=1.2 Score=37.56 Aligned_cols=22 Identities=27% Similarity=0.421 Sum_probs=19.4
Q ss_pred cEEEEEccChHHHHHHHHHHcC
Q 029791 4 VKIGINGFGRIGRLVARVILQR 25 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~ 25 (188)
+||+|+|.|.+|..++..+...
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~ 43 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTN 43 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHc
Confidence 6999999999999999888653
No 344
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=79.16 E-value=2.2 Score=36.13 Aligned_cols=33 Identities=18% Similarity=0.217 Sum_probs=27.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.+++|+|.|.+|+.+++++.....++-+.|.|.
T Consensus 130 ~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r 162 (350)
T 1x7d_A 130 RKMALIGNGAQSEFQALAFHKHLGIEEIVAYDT 162 (350)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHSCCCEEEEECS
T ss_pred CeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 589999999999999998764334777788886
No 345
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=78.90 E-value=2.1 Score=34.96 Aligned_cols=33 Identities=18% Similarity=0.278 Sum_probs=27.7
Q ss_pred CccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 2 GKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 2 ~~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
+++||-|.| .|.||+.+++.+.+.+ .+++++.-
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 57 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLN-QVVIGLDN 57 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 347999999 7999999999998874 78888764
No 346
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=78.77 E-value=5.7 Score=32.41 Aligned_cols=31 Identities=19% Similarity=0.374 Sum_probs=24.6
Q ss_pred EEEEEcc-ChHHHHHHHHHHcCCCceEEEEecC
Q 029791 5 KIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 5 kvgI~G~-GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
+|.|.|. |.+|...++.+.... .+++++...
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~ 183 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG-YTVEASTGK 183 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEESC
T ss_pred eEEEecCCCHHHHHHHHHHHHCC-CEEEEEECC
Confidence 6999996 999999988877664 677777643
No 347
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=78.72 E-value=2.6 Score=35.43 Aligned_cols=35 Identities=29% Similarity=0.334 Sum_probs=25.5
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
|+++||+|+|.|.+|..++..+...+-.+ +.+.|.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~-v~L~Di 39 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGD-VVLFDI 39 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEeC
Confidence 55679999999999999888877664225 445555
No 348
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=78.62 E-value=2.6 Score=33.74 Aligned_cols=30 Identities=23% Similarity=0.447 Sum_probs=25.8
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
|||-|-| .|.||+.+++.|.+. +.+|+++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~-G~~V~~l~ 31 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNAR-GHEVTLVS 31 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-CCEEEEEE
Confidence 4899999 699999999999887 47888875
No 349
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=78.50 E-value=1.4 Score=36.72 Aligned_cols=33 Identities=18% Similarity=0.357 Sum_probs=24.8
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
..||.|+|.|-+|..+++.|.... +.-+.|.|.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aG-VG~i~lvD~ 68 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCG-IGKLLLFDY 68 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECC
T ss_pred CCeEEEECcCHHHHHHHHHHHHcC-CCEEEEECC
Confidence 368999999999999999887653 444445554
No 350
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=78.37 E-value=2.4 Score=36.07 Aligned_cols=31 Identities=19% Similarity=0.239 Sum_probs=25.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.+|+|+|+|+||+.+++.+...+ +++++. |.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~G-a~V~~~-d~ 199 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMG-ATVTVL-DI 199 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE-ES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEE-eC
Confidence 58999999999999999888764 675554 54
No 351
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=78.31 E-value=3.2 Score=34.42 Aligned_cols=138 Identities=11% Similarity=0.104 Sum_probs=67.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeec
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~-~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
-+|.|.|.|.+|...++.+.... . +++++.- +.+.+..+.++ |. + ..++-+.-.+.+
T Consensus 169 ~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~---~~~~~~~~~~~----Ga----~--------~~~~~~~~~~~~-- 226 (348)
T 2d8a_A 169 KSVLITGAGPLGLLGIAVAKASG-AYPVIVSEP---SDFRRELAKKV----GA----D--------YVINPFEEDVVK-- 226 (348)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT-CCSEEEECS---CHHHHHHHHHH----TC----S--------EEECTTTSCHHH--
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEECC---CHHHHHHHHHh----CC----C--------EEECCCCcCHHH--
Confidence 36899999999999998887664 6 7777642 23333333221 10 0 111100000000
Q ss_pred CCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCCCCeEEeecCc--cCCCCCCceEEcCChh-hHhH
Q 029791 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNE--NEYKPELNIVSNASCT-TNCL 159 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d~p~~V~gvN~--~~~~~~~~iis~~sCt-T~~l 159 (188)
...++. ...++|+||||+|.....+.+...++.|-+-|.+..++.+. .++. ..+..+..++..-..+ ...+
T Consensus 227 ~v~~~~-~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-----~~~~~~~~~~~~~~i~g~~~~~~~~~~ 300 (348)
T 2d8a_A 227 EVMDIT-DGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKV-----TIDFNNLIIFKALTIYGITGRHLWETW 300 (348)
T ss_dssp HHHHHT-TTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCC-----CCCHHHHTTTTTCEEEECCCCCSHHHH
T ss_pred HHHHHc-CCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCc-----ccCchHHHHhCCcEEEEecCCCcHHHH
Confidence 000000 11379999999996444455556666554323232222211 2232 2222234455432223 4566
Q ss_pred HHHHHHHHhh
Q 029791 160 APLAKVIHDK 169 (188)
Q Consensus 160 ap~l~~l~~~ 169 (188)
.-+++.+.+.
T Consensus 301 ~~~~~l~~~g 310 (348)
T 2d8a_A 301 YTVSRLLQSG 310 (348)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHcC
Confidence 7777777653
No 352
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=78.11 E-value=11 Score=31.25 Aligned_cols=30 Identities=23% Similarity=0.202 Sum_probs=23.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCce-EEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVE-LVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~-ivaIn 34 (188)
-+|.|+|.|.+|...++.+.... .+ ++++.
T Consensus 181 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 211 (363)
T 3m6i_A 181 DPVLICGAGPIGLITMLCAKAAG-ACPLVITD 211 (363)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT-CCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 36899999999999888877664 65 66553
No 353
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=78.00 E-value=5.6 Score=33.05 Aligned_cols=31 Identities=23% Similarity=0.240 Sum_probs=24.5
Q ss_pred cEEEEEccChHHHHH-HHHH-HcCCCce-EEEEec
Q 029791 4 VKIGINGFGRIGRLV-ARVI-LQRDDVE-LVAVND 35 (188)
Q Consensus 4 ~kvgI~G~GriGr~~-~r~~-~~~~~~~-ivaInd 35 (188)
-+|.|+|.|.+|... ++.+ ... +.+ ++++..
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~ 207 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGR 207 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeC
Confidence 589999999999998 8877 544 466 777754
No 354
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=77.72 E-value=3.3 Score=34.77 Aligned_cols=32 Identities=22% Similarity=0.186 Sum_probs=25.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~ 37 (188)
-||+|+|.|.+|+.++..+... ++++ .+.|+.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~-G~~V-~l~D~~ 38 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG-GFRV-KLYDIE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCE-EEECSC
T ss_pred CeEEEECCcHHHHHHHHHHHhC-CCeE-EEEECC
Confidence 5899999999999998877766 4764 456763
No 355
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=77.62 E-value=2.6 Score=35.80 Aligned_cols=35 Identities=29% Similarity=0.372 Sum_probs=25.6
Q ss_pred CCccEEEEEcc-ChHHHHHHHHHHcCCCc-eEEEEecC
Q 029791 1 MGKVKIGINGF-GRIGRLVARVILQRDDV-ELVAVNDP 36 (188)
Q Consensus 1 m~~~kvgI~G~-GriGr~~~r~~~~~~~~-~ivaInd~ 36 (188)
|.++||+|+|. |.+|..++..+...+-. ++ .+.|.
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~ev-vLiDi 42 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNL-CLYDP 42 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCE-EEECS
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEE-EEEeC
Confidence 44579999997 99999998877766532 44 44555
No 356
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=77.61 E-value=2.4 Score=37.92 Aligned_cols=31 Identities=19% Similarity=0.370 Sum_probs=25.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.+|+|+|+|.||+.+++.+...+ +++++ .|+
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~G-a~Viv-~d~ 305 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQG-ARVSV-TEI 305 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEE-ECS
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEE-EeC
Confidence 58999999999999999888764 67554 455
No 357
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=77.33 E-value=12 Score=32.59 Aligned_cols=94 Identities=15% Similarity=0.094 Sum_probs=53.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
.+|-|+|.|++|...++.+.+.+ .+++.|. +.... .+..+.+ . +.+.+.. .+-+
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~g-a~V~vi~-~~~~~-~~~~l~~--~-------~~i~~~~--------------~~~~ 66 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAG-ARLTVNA-LTFIP-QFTVWAN--E-------GMLTLVE--------------GPFD 66 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-BEEEEEE-SSCCH-HHHHHHT--T-------TSCEEEE--------------SSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCc-CEEEEEc-CCCCH-HHHHHHh--c-------CCEEEEE--------------CCCC
Confidence 68999999999999999998874 6666554 42222 2222211 0 1122111 1112
Q ss_pred CCCCCcccCCccEEEeecCcc-cCHHhHHHHHhCCCcEEEEeCCC
Q 029791 84 PEEIPWAETGAEYVVESTGVF-TDKDKAAAHLKGGAKKVIISAPS 127 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~-~~~~~~~~h~~~Gakkviis~ps 127 (188)
++.++ ++|+||=|||.- ....-+....+.|..--+++.|.
T Consensus 67 ~~~l~----~~~lVi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e 107 (457)
T 1pjq_A 67 ETLLD----SCWLAIAATDDDTVNQRVSDAAESRRIFCNVVDAPK 107 (457)
T ss_dssp GGGGT----TCSEEEECCSCHHHHHHHHHHHHHTTCEEEETTCTT
T ss_pred ccccC----CccEEEEcCCCHHHHHHHHHHHHHcCCEEEECCCcc
Confidence 33332 789999999976 34444444555777422355553
No 358
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=77.27 E-value=2.8 Score=37.11 Aligned_cols=32 Identities=22% Similarity=0.204 Sum_probs=25.9
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
..||+|+|.|.+|..++..+... +++++.. |.
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~a-G~~V~l~-D~ 85 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLA-GIETFLV-VR 85 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEE-CS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCeEEEE-EC
Confidence 36899999999999999988876 4776555 55
No 359
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=77.22 E-value=3.1 Score=34.67 Aligned_cols=39 Identities=26% Similarity=0.398 Sum_probs=30.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhh
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~ 43 (188)
.+++|+|.|.+|+.+++++.....++-+.|.|.. ..+.+
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~l 160 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-ASPEI 160 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CCHHH
T ss_pred cEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HHHHH
Confidence 5899999999999999998763337777788875 44443
No 360
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=77.20 E-value=2.7 Score=34.96 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=25.2
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
++||+|+|.|.+|..++..+...+-+.-+.+.|.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di 40 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDV 40 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 4799999999999998888776653333444565
No 361
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=77.08 E-value=2.2 Score=34.54 Aligned_cols=31 Identities=16% Similarity=0.205 Sum_probs=24.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.||+|+|.|.+|+.+++.+.+.+ .++ .+.|.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g-~~V-~v~~r 160 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEG-AKV-FLWNR 160 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT-CEE-EEECS
T ss_pred CEEEEECchHHHHHHHHHHHHcC-CEE-EEEEC
Confidence 58999999999999999998764 554 45554
No 362
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=76.99 E-value=2.3 Score=31.97 Aligned_cols=32 Identities=19% Similarity=0.307 Sum_probs=26.0
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCc-eEEEEe
Q 029791 3 KVKIGING-FGRIGRLVARVILQRDDV-ELVAVN 34 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~~~~~-~ivaIn 34 (188)
.+||-|.| .|.||+.+++.+.+.+.+ +++++.
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~ 38 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPA 38 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCB
T ss_pred CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEe
Confidence 46899999 899999999999987642 766654
No 363
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=76.96 E-value=3 Score=34.26 Aligned_cols=32 Identities=31% Similarity=0.478 Sum_probs=24.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCC-ceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDD-VELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~-~~ivaInd~ 36 (188)
+||+|+|.|.+|..++..+...+- .++ .+.|.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V-~l~d~ 34 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDY-VFIDA 34 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEE-EEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEE-EEEcC
Confidence 599999999999999988876531 244 44555
No 364
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=76.84 E-value=6.1 Score=32.39 Aligned_cols=31 Identities=13% Similarity=0.250 Sum_probs=25.1
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
-+|.|.| .|.||...++.+.... .+++++..
T Consensus 150 ~~vlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~ 181 (334)
T 3qwb_A 150 DYVLLFAAAGGVGLILNQLLKMKG-AHTIAVAS 181 (334)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 4799999 8999999988887664 68877754
No 365
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=76.77 E-value=6 Score=33.14 Aligned_cols=30 Identities=20% Similarity=0.416 Sum_probs=23.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~-~ivaIn 34 (188)
-+|.|.|.|.+|...++.+.... . +++++.
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~ 225 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTAG-ASRIIGID 225 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT-CSCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 47899999999999888776654 5 677764
No 366
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=76.62 E-value=2.7 Score=37.14 Aligned_cols=40 Identities=13% Similarity=0.293 Sum_probs=29.3
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhh
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l 46 (188)
.+||+|+|+|.+|..++..+.+. +.+++++ |. +.+.+..+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~-G~~V~~~-d~--~~~~v~~l 47 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADI-GHDVFCL-DV--DQAKIDIL 47 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEE-CS--CHHHHHHH
T ss_pred CceEEEECcCHHHHHHHHHHHhC-CCEEEEE-EC--CHHHHHHH
Confidence 47999999999999999888776 4676666 43 44444333
No 367
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=76.40 E-value=2.7 Score=34.24 Aligned_cols=35 Identities=23% Similarity=0.361 Sum_probs=26.9
Q ss_pred CC-ccEEEEEc-cChHHHHHHHHHHcCC-CceEEEEec
Q 029791 1 MG-KVKIGING-FGRIGRLVARVILQRD-DVELVAVND 35 (188)
Q Consensus 1 m~-~~kvgI~G-~GriGr~~~r~~~~~~-~~~ivaInd 35 (188)
|+ |++|-|-| .|.||+.+++.+.+.+ +.+++++.-
T Consensus 1 Ms~m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r 38 (348)
T 1oc2_A 1 MSQFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDK 38 (348)
T ss_dssp --CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred CCcCcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 53 36899999 7999999999998753 578887754
No 368
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=76.39 E-value=2.2 Score=35.67 Aligned_cols=31 Identities=16% Similarity=0.405 Sum_probs=24.3
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
-+|.|.|.|.+|...++.+.... .+++++..
T Consensus 182 ~~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~~ 212 (357)
T 2cf5_A 182 LRGGILGLGGVGHMGVKIAKAMG-HHVTVISS 212 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CeEEEEeC
Confidence 37999999999999888776654 67777654
No 369
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=76.38 E-value=4.7 Score=34.10 Aligned_cols=33 Identities=24% Similarity=0.375 Sum_probs=24.7
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
..||.|+|.|.+|..+++.+...+ +.-+.|.|.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aG-vg~i~lvD~ 150 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSG-IGEIILIDN 150 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCC-CCeEEEECC
Confidence 358999999999999999887653 544444443
No 370
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=76.21 E-value=3 Score=33.33 Aligned_cols=32 Identities=34% Similarity=0.511 Sum_probs=27.0
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
++||-|.| .|.||+.+++.+.+.+ .+++++.-
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 39 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASG-EEVTVLDD 39 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CCEEEECC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCC-CEEEEEec
Confidence 57999999 6999999999998874 78777754
No 371
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=76.11 E-value=2.4 Score=33.59 Aligned_cols=26 Identities=19% Similarity=0.489 Sum_probs=22.7
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCC
Q 029791 1 MGKVKIGING-FGRIGRLVARVILQRD 26 (188)
Q Consensus 1 m~~~kvgI~G-~GriGr~~~r~~~~~~ 26 (188)
|+++||-|.| .|.||+.+++.+.+.+
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g 30 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGA 30 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTT
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcC
Confidence 5568999999 7999999999998765
No 372
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=75.39 E-value=3.7 Score=35.47 Aligned_cols=31 Identities=13% Similarity=0.024 Sum_probs=25.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.||+|+|+|++|+..++.+.... .++ .+.|.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lG-a~V-~v~D~ 215 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLG-AKT-TGYDV 215 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHT-CEE-EEECS
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEE-EEEeC
Confidence 58999999999999999887654 664 45666
No 373
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=75.38 E-value=2.8 Score=34.15 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=27.9
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCC-CceEEEEecC
Q 029791 3 KVKIGING-FGRIGRLVARVILQRD-DVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~~~-~~~ivaInd~ 36 (188)
++||-|.| .|.||+.+++.+.+.+ .++++++...
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~ 59 (346)
T 4egb_A 24 AMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDAL 59 (346)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECC
T ss_pred CCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecc
Confidence 47999999 6999999999998763 5888888643
No 374
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=75.23 E-value=3.4 Score=37.24 Aligned_cols=32 Identities=22% Similarity=0.319 Sum_probs=25.2
Q ss_pred cEEEEEccChHHHHHHHHHHcC-----CCceEEEEec
Q 029791 4 VKIGINGFGRIGRLVARVILQR-----DDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~-----~~~~ivaInd 35 (188)
.||||+|+|.+|+.+++.+.+. .+++++.-.+
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r 91 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLR 91 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeC
Confidence 5899999999999999999865 2467654444
No 375
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=75.22 E-value=2.1 Score=33.85 Aligned_cols=31 Identities=13% Similarity=0.380 Sum_probs=26.4
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
+||-|.| .|.||+.+++.+.+. +.+++++.-
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r 37 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPE-EYDIYPFDK 37 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTT-TEEEEEECT
T ss_pred eEEEEECCCCHHHHHHHHHHHhC-CCEEEEecc
Confidence 6999999 799999999988876 488888753
No 376
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=74.97 E-value=4.3 Score=33.89 Aligned_cols=33 Identities=24% Similarity=0.340 Sum_probs=25.0
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
..||+|+|.|.+|..++..+...+ +.-+.+.|.
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g-~~~v~l~D~ 40 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKE-LADVVLVDI 40 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CCEEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CCeEEEEec
Confidence 369999999999999988887764 423445555
No 377
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=74.93 E-value=4.7 Score=33.01 Aligned_cols=31 Identities=16% Similarity=0.180 Sum_probs=24.7
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
-+|.|.| .|.+|...++.+.... .+++++..
T Consensus 142 ~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~ 173 (325)
T 3jyn_A 142 EIILFHAAAGGVGSLACQWAKALG-AKLIGTVS 173 (325)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHT-CEEEEEES
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 4789999 8999999988877654 68777753
No 378
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=74.61 E-value=2.7 Score=36.20 Aligned_cols=33 Identities=24% Similarity=0.173 Sum_probs=29.2
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
||+.||.|.|-|.+|+.+++++.+. +++++++.
T Consensus 4 m~~~kiLI~g~g~~a~~i~~aa~~~-G~~~v~v~ 36 (446)
T 3ouz_A 4 MEIKSILIANRGEIALRALRTIKEM-GKKAICVY 36 (446)
T ss_dssp TCCCEEEECCCHHHHHHHHHHHHHT-TCEEEEEE
T ss_pred cccceEEEECCCHHHHHHHHHHHHc-CCEEEEEE
Confidence 6668999999999999999999887 59999885
No 379
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=74.32 E-value=3.8 Score=34.24 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=26.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~ 37 (188)
+||+|+|.|.+|..++..+...+.++ |.+.|..
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~-V~L~D~~ 42 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELAD-VVLYDVV 42 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCE-EEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCe-EEEEECC
Confidence 69999999999999988887654337 6677763
No 380
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=74.16 E-value=4 Score=35.50 Aligned_cols=111 Identities=18% Similarity=0.182 Sum_probs=61.4
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCC-ceEEEEecCCCchhhhhhhhh-cccccCcCCCcceEEeCCCeeEECCEEEEEEe
Q 029791 4 VKIGING-FGRIGRLVARVILQRDD-VELVAVNDPFITTDYMTYMFK-YDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~-~~ivaInd~~~~~~~~~~l~~-yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
.||.|.| +|-||...++.+...|+ |+++++.--..+.+.|+...+ |.. .-+...+.....- ..++++.
T Consensus 22 k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aLaa~g~nv~~L~~q~~~f~p-------~~v~v~d~~~~~~--~~~~v~~ 92 (398)
T 2y1e_A 22 LRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHLDTLLRQRAQTGV-------TNIAVADEHAAQR--VGDIPYH 92 (398)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTTTEEEEEEEECSSCHHHHHHHHHHHCC-------CCEEESCHHHHHH--HCCCSEE
T ss_pred eEEEEEccCcHHHHHHHHHHHhCCCceEEEEEEecCCCHHHHHHHHHHcCC-------CEEEEcCHHHhhh--cCCEEEe
Confidence 5899999 89999999999887764 999999872235555544332 221 1111111000000 0011111
Q ss_pred ecC-CCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeC
Q 029791 81 VRN-PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA 125 (188)
Q Consensus 81 ~~~-p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ 125 (188)
..+ ..++- ...++|+|+-+.-.+....-.-..+++|. ++-+.+
T Consensus 93 G~~~l~~~a-~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK-~iaLAN 136 (398)
T 2y1e_A 93 GSDAATRLV-EQTEADVVLNALVGALGLRPTLAALKTGA-RLALAN 136 (398)
T ss_dssp STTHHHHHH-HHSCCSEEEECCCSGGGHHHHHHHHHHTC-EEEECC
T ss_pred cHHHHHHHh-cCCCCCEEEEeCcCHHHHHHHHHHHHCCC-ceEEcc
Confidence 111 00000 01258999998877777766667788884 555543
No 381
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=74.16 E-value=11 Score=31.40 Aligned_cols=31 Identities=10% Similarity=0.027 Sum_probs=25.0
Q ss_pred cEEEEEcc-ChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G~-GriGr~~~r~~~~~~~~~ivaInd 35 (188)
-+|.|+|. |.+|...++.+... +.+++++.+
T Consensus 166 ~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~~ 197 (371)
T 3gqv_A 166 VYVLVYGGSTATATVTMQMLRLS-GYIPIATCS 197 (371)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred cEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeC
Confidence 36999997 99999998888766 468888764
No 382
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=74.04 E-value=16 Score=30.04 Aligned_cols=30 Identities=17% Similarity=0.148 Sum_probs=23.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
-+|.|.|.|.+|...++.+... +.+++++.
T Consensus 170 ~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~ 199 (352)
T 1e3j_A 170 TTVLVIGAGPIGLVSVLAAKAY-GAFVVCTA 199 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEc
Confidence 4799999999999988877766 46766554
No 383
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=73.97 E-value=1.9 Score=33.65 Aligned_cols=31 Identities=16% Similarity=0.187 Sum_probs=24.0
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
..+|.|.|+|++|+.+++.+.+.+ . ++.| |.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g-~-v~vi-d~ 39 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSE-V-FVLA-ED 39 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSE-E-EEEE-SC
T ss_pred CCEEEEECCChHHHHHHHHHHhCC-e-EEEE-EC
Confidence 358999999999999999887654 5 6655 44
No 384
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=73.94 E-value=3.8 Score=33.91 Aligned_cols=32 Identities=41% Similarity=0.622 Sum_probs=23.6
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~-~ivaInd~ 36 (188)
+||+|+|.|.+|..++..+...+.. +++ +.|.
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~-l~D~ 33 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMV-LIDV 33 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEE-EEeC
Confidence 3899999999999998887765422 444 4455
No 385
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=73.92 E-value=3.4 Score=32.97 Aligned_cols=33 Identities=27% Similarity=0.353 Sum_probs=27.0
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
+++|-|.| .|.||+.+++.+.+.++.+++++.-
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R 38 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTR 38 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEc
Confidence 36899999 6999999999998764478877753
No 386
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=73.80 E-value=4.2 Score=33.15 Aligned_cols=32 Identities=22% Similarity=0.409 Sum_probs=26.9
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
+++|-|.| .|.||+.+++.+.+.+ .+++++..
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 59 (343)
T 2b69_A 27 RKRILITGGAGFVGSHLTDKLMMDG-HEVTVVDN 59 (343)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCEEEEEcCccHHHHHHHHHHHHCC-CEEEEEeC
Confidence 47899999 6999999999998764 78887754
No 387
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=73.72 E-value=6.1 Score=33.06 Aligned_cols=31 Identities=26% Similarity=0.387 Sum_probs=25.0
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
-+|.|.| .|.+|...++.+.... .+++++..
T Consensus 185 ~~VlV~Ga~G~vG~~~~qla~~~G-a~Vi~~~~ 216 (375)
T 2vn8_A 185 KRVLILGASGGVGTFAIQVMKAWD-AHVTAVCS 216 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-CEEEEEeC
Confidence 3799999 7999999988887664 68887763
No 388
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=73.64 E-value=3.5 Score=35.52 Aligned_cols=31 Identities=19% Similarity=0.101 Sum_probs=25.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.+|+|+|+|++|+..++.+...+ .+ |.+.|.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~G-a~-V~v~D~ 203 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLG-AI-VRAFDT 203 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CE-EEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CE-EEEEcC
Confidence 58999999999999999887765 66 445565
No 389
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=73.49 E-value=3.6 Score=34.03 Aligned_cols=44 Identities=16% Similarity=0.231 Sum_probs=32.5
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhh
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFK 48 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~ 48 (188)
|||-|-| .|.||+.+++.+.+.+.++++++.- ..+.+.+..+++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~-~~d~~~l~~~~~ 45 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHR-QTKEEELESALL 45 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCT-TCCHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECC-CCCHHHHHHHhc
Confidence 3899999 7999999999998876557777643 125666655553
No 390
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=73.44 E-value=8.1 Score=32.20 Aligned_cols=30 Identities=13% Similarity=0.201 Sum_probs=23.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~-~ivaIn 34 (188)
-+|.|.|.|.+|...++.+.... . +++++.
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 223 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKAAG-ASRIIGVG 223 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEC
Confidence 47999999999999888776553 5 666663
No 391
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=73.24 E-value=2.8 Score=33.49 Aligned_cols=34 Identities=26% Similarity=0.338 Sum_probs=27.3
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcC-CCceEEEEec
Q 029791 1 MGKVKIGING-FGRIGRLVARVILQR-DDVELVAVND 35 (188)
Q Consensus 1 m~~~kvgI~G-~GriGr~~~r~~~~~-~~~~ivaInd 35 (188)
|+ +||-|.| .|.||+.+++.+.+. ++.+++++.-
T Consensus 1 M~-~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 36 (312)
T 2yy7_A 1 MN-PKILIIGACGQIGTELTQKLRKLYGTENVIASDI 36 (312)
T ss_dssp CC-CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEES
T ss_pred CC-ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 54 6899999 699999999999876 3577777753
No 392
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=73.06 E-value=4.3 Score=35.36 Aligned_cols=112 Identities=14% Similarity=0.173 Sum_probs=63.2
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCC-ceEEEEecCCCchhhhhhhhh-cccccCcCCCcceEEeCCC---eeE--E--CC
Q 029791 4 VKIGING-FGRIGRLVARVILQRDD-VELVAVNDPFITTDYMTYMFK-YDSVHGQWKHHELKVKDDK---TLL--F--GE 73 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~-~~ivaInd~~~~~~~~~~l~~-yDS~~g~~~~~~v~~~~~~---~l~--i--~g 73 (188)
.+|.|.| +|-||...++.+...|+ |+++++.-- .+.+.|+...+ |.. .-+...+.. .|. + .|
T Consensus 10 k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aL~ag-~nv~~L~~q~~~f~p-------~~v~v~d~~~~~~L~~~l~~~~ 81 (406)
T 1q0q_A 10 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG-KNVTRMVEQCLEFSP-------RYAVMDDEASAKLLKTMLQQQG 81 (406)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES-SCHHHHHHHHHHHCC-------SEEEESSHHHHHHHHHHHHHTT
T ss_pred eeEEEEccCcHHHHHHHHHHHhCCCccEEEEEEcC-CCHHHHHHHHHHhCC-------CEEEEcCHHHHHHHHHHhhcCC
Confidence 5899999 89999999999887764 999999874 35555544332 221 111111100 000 0 11
Q ss_pred EEEEEEeecC-CCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeC
Q 029791 74 KPVTVFGVRN-PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA 125 (188)
Q Consensus 74 ~~i~v~~~~~-p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ 125 (188)
..++++...+ ..++- ...++|+|+-+.-.+....-.-..+++|. ++.+.+
T Consensus 82 ~~~~v~~G~~~l~~~a-~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK-~iaLAN 132 (406)
T 1q0q_A 82 SRTEVLSGQQAACDMA-ALEDVDQVMAAIVGAAGLLPTLAAIRAGK-TILLAN 132 (406)
T ss_dssp CCCEEEESHHHHHHHH-TCTTCCEEEECCSSGGGHHHHHHHHHTTC-EEEECC
T ss_pred CCcEEEeCHHHHHHHh-cCCCCCEEEEccccHhHHHHHHHHHHCCC-eEEEec
Confidence 1223322211 11110 01258999998877777766667788884 555543
No 393
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=73.01 E-value=3.9 Score=34.38 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=26.6
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.+||+|+|.|.+|..++..+...+-+.-+.+.|.
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~ 42 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 3699999999999999988877654444556665
No 394
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=72.45 E-value=6 Score=34.16 Aligned_cols=39 Identities=15% Similarity=0.194 Sum_probs=28.4
Q ss_pred cEEEEEcc-ChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhh
Q 029791 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (188)
Q Consensus 4 ~kvgI~G~-GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l 46 (188)
-+|.|.|. |.+|...++.+... +.+++++.. +.+.+.++
T Consensus 230 ~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~---~~~~~~~~ 269 (456)
T 3krt_A 230 DNVLIWGASGGLGSYATQFALAG-GANPICVVS---SPQKAEIC 269 (456)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHT-TCEEEEEES---SHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHc-CCeEEEEEC---CHHHHHHH
Confidence 36999996 99999988888766 478777764 34444444
No 395
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=72.28 E-value=3.5 Score=34.45 Aligned_cols=30 Identities=17% Similarity=0.112 Sum_probs=23.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~-~ivaIn 34 (188)
-+|.|+|.|.+|...++.+.... . +++++.
T Consensus 192 ~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~ 222 (371)
T 1f8f_A 192 SSFVTWGAGAVGLSALLAAKVCG-ASIIIAVD 222 (371)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHT-CSEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEC
Confidence 37999999999998888776553 5 566664
No 396
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=72.15 E-value=5.8 Score=32.67 Aligned_cols=30 Identities=23% Similarity=0.419 Sum_probs=24.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.+|.|.|.|.+|...++.+.... .+++++.
T Consensus 166 ~~VlV~GaG~vG~~~~~~a~~~G-a~Vi~~~ 195 (339)
T 1rjw_A 166 EWVAIYGIGGLGHVAVQYAKAMG-LNVVAVD 195 (339)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CEEEEEe
Confidence 47999999999999998887664 6877765
No 397
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=72.10 E-value=3.4 Score=35.48 Aligned_cols=30 Identities=27% Similarity=0.541 Sum_probs=24.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~-~ivaIn 34 (188)
.+|+|+|+|.+|+.+++.+...+ + +++.++
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G-~~~V~v~~ 198 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRG-VRAVLVAN 198 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC-CSEEEEEC
T ss_pred CEEEEEChHHHHHHHHHHHHHCC-CCEEEEEe
Confidence 58999999999999999887654 6 555554
No 398
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=71.91 E-value=4.1 Score=34.64 Aligned_cols=32 Identities=16% Similarity=0.119 Sum_probs=25.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~ 37 (188)
.+|+|+|+|++|+..++.+...+ .+ |.+.|..
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~G-a~-V~~~d~~ 204 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLG-AV-VMATDVR 204 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CE-EEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CE-EEEEeCC
Confidence 58999999999999999887765 67 5556653
No 399
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=71.91 E-value=18 Score=31.17 Aligned_cols=86 Identities=16% Similarity=0.221 Sum_probs=50.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCc--hhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEee
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIT--TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~--~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
.||.|+|.|..|...++.+.++. .++.+ .|.... ......|-+ .| + ++...
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G-~~V~~-~D~~~~~~~~~~~~L~~----------------~g--i-------~~~~g 62 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLG-AIVTV-NDGKPFDENPTAQSLLE----------------EG--I-------KVVCG 62 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTT-CEEEE-EESSCGGGCHHHHHHHH----------------TT--C-------EEEES
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC-CEEEE-EeCCcccCChHHHHHHh----------------CC--C-------EEEEC
Confidence 58999999999999988888774 66555 454211 111111110 12 1 11122
Q ss_pred cCCCCCCcccCC-ccEEEeecCcccCHHhHHHHHhCCCc
Q 029791 82 RNPEEIPWAETG-AEYVVESTGVFTDKDKAAAHLKGGAK 119 (188)
Q Consensus 82 ~~p~~~~w~~~~-vdiV~e~tg~~~~~~~~~~h~~~Gak 119 (188)
.+++++ + .+ +|+|+=+.|.-.+........+.|.+
T Consensus 63 ~~~~~~-~--~~~~d~vv~spgi~~~~p~~~~a~~~gi~ 98 (451)
T 3lk7_A 63 SHPLEL-L--DEDFCYMIKNPGIPYNNPMVKKALEKQIP 98 (451)
T ss_dssp CCCGGG-G--GSCEEEEEECTTSCTTSHHHHHHHHTTCC
T ss_pred CChHHh-h--cCCCCEEEECCcCCCCChhHHHHHHCCCc
Confidence 334332 1 14 89999999976665555666677774
No 400
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=71.90 E-value=4.1 Score=33.29 Aligned_cols=32 Identities=25% Similarity=0.343 Sum_probs=26.7
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
+++|-|.| .|.||+.+++.+.+.+ .+++++.-
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 59 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKLD-QKVVGLDN 59 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 46899999 6999999999998874 78777753
No 401
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=71.81 E-value=5 Score=32.11 Aligned_cols=32 Identities=25% Similarity=0.400 Sum_probs=26.0
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEe
Q 029791 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 1 m~~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
|+ ++|-|.| .|.||+.+++.+.+.+ .+++++.
T Consensus 1 m~-~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 33 (315)
T 2ydy_A 1 MN-RRVLVTGATGLLGRAVHKEFQQNN-WHAVGCG 33 (315)
T ss_dssp -C-CEEEEETTTSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CC-CeEEEECCCcHHHHHHHHHHHhCC-CeEEEEc
Confidence 53 6899999 6999999999998764 7777764
No 402
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=71.36 E-value=15 Score=30.55 Aligned_cols=30 Identities=17% Similarity=0.272 Sum_probs=23.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~-~ivaIn 34 (188)
-+|.|.|.|.+|...++.+.... . +++++.
T Consensus 193 ~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~ 223 (374)
T 2jhf_A 193 STCAVFGLGGVGLSVIMGCKAAG-AARIIGVD 223 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 47999999999999888877664 5 676664
No 403
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=71.20 E-value=4.5 Score=33.36 Aligned_cols=34 Identities=24% Similarity=0.343 Sum_probs=25.9
Q ss_pred CC-ccEEEEEc-cChHHHHHHHHHHcCCCc------eEEEEe
Q 029791 1 MG-KVKIGING-FGRIGRLVARVILQRDDV------ELVAVN 34 (188)
Q Consensus 1 m~-~~kvgI~G-~GriGr~~~r~~~~~~~~------~ivaIn 34 (188)
|+ ++||.|.| .|.||+.+++.+...+.+ +++.+.
T Consensus 1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D 42 (327)
T 1y7t_A 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLE 42 (327)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEEC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEe
Confidence 53 47999999 599999999988876532 666653
No 404
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=71.04 E-value=4.7 Score=29.71 Aligned_cols=32 Identities=22% Similarity=0.217 Sum_probs=24.8
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 2 ~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
|+..|.|+|.|..|-..+..|... +++++-+-
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~-G~~V~v~E 32 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAA-GHQVHLFD 32 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT-TCCEEEEC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEE
Confidence 247899999999999988888766 47766553
No 405
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=70.93 E-value=4.8 Score=33.09 Aligned_cols=133 Identities=14% Similarity=0.139 Sum_probs=69.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
-+|.|.|.|.+|...++.+.... .+++++.- +.+.+.++.+ .|. + ..++ .++
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~---~~~~~~~~~~----lGa----~--------~~i~--------~~~ 219 (340)
T 3s2e_A 168 QWVVISGIGGLGHVAVQYARAMG-LRVAAVDI---DDAKLNLARR----LGA----E--------VAVN--------ARD 219 (340)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTT-CEEEEEES---CHHHHHHHHH----TTC----S--------EEEE--------TTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CeEEEEeC---CHHHHHHHHH----cCC----C--------EEEe--------CCC
Confidence 47899999999999988887664 68887743 3344433322 111 0 1111 011
Q ss_pred CC---CCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCCCCeEEeecCccCCCCCCceEEcCChhhHhHH
Q 029791 84 PE---EIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCLA 160 (188)
Q Consensus 84 p~---~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d~p~~V~gvN~~~~~~~~~iis~~sCtT~~la 160 (188)
++ .+.-...++|+||||+|.....+.+-..++.|-+ +++-+.... + +-...+ ..+.....+......+...+.
T Consensus 220 ~~~~~~~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~G~-iv~~G~~~~-~-~~~~~~-~~~~~~~~i~g~~~~~~~~~~ 295 (340)
T 3s2e_A 220 TDPAAWLQKEIGGAHGVLVTAVSPKAFSQAIGMVRRGGT-IALNGLPPG-D-FGTPIF-DVVLKGITIRGSIVGTRSDLQ 295 (340)
T ss_dssp SCHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEE-EEECSCCSS-E-EEEEHH-HHHHTTCEEEECCSCCHHHHH
T ss_pred cCHHHHHHHhCCCCCEEEEeCCCHHHHHHHHHHhccCCE-EEEeCCCCC-C-CCCCHH-HHHhCCeEEEEEecCCHHHHH
Confidence 00 0000012789999999966555666667765543 333332221 1 111111 111123445544444556677
Q ss_pred HHHHHHHh
Q 029791 161 PLAKVIHD 168 (188)
Q Consensus 161 p~l~~l~~ 168 (188)
.+++.+.+
T Consensus 296 ~~~~l~~~ 303 (340)
T 3s2e_A 296 ESLDFAAH 303 (340)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 77777765
No 406
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=70.92 E-value=5 Score=33.85 Aligned_cols=31 Identities=23% Similarity=0.342 Sum_probs=25.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.+|+|.|.|.||+.+++.+...+ .+++++ |.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~G-a~V~~~-d~ 197 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMG-AQVTIL-DV 197 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE-ES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEE-EC
Confidence 58999999999999999888764 676555 44
No 407
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=70.88 E-value=4.3 Score=33.78 Aligned_cols=34 Identities=24% Similarity=0.228 Sum_probs=25.9
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
++||+|+|.|.+|..++..+...+-+.-+.+.|.
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di 38 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDV 38 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 3799999999999988887776554444555676
No 408
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=70.83 E-value=5 Score=33.13 Aligned_cols=33 Identities=36% Similarity=0.484 Sum_probs=25.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
|||+|+|.|.+|..++..+...+.+.-+.+-|.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~ 33 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDI 33 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 489999999999999888876654434555565
No 409
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=70.69 E-value=5.6 Score=30.71 Aligned_cols=33 Identities=18% Similarity=0.121 Sum_probs=28.8
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
+.|+.|+|.|--||.+++.+.+ .++++++.-|.
T Consensus 12 ~k~v~IiGAGg~g~~v~~~l~~-~~~~~vgfiDd 44 (220)
T 4ea9_A 12 IGGVVIIGGGGHAKVVIESLRA-CGETVAAIVDA 44 (220)
T ss_dssp SSCEEEECCSHHHHHHHHHHHH-TTCCEEEEECS
T ss_pred CCCEEEEcCCHHHHHHHHHHHh-CCCEEEEEEeC
Confidence 3589999999999999998887 46999999886
No 410
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=70.63 E-value=5.8 Score=32.02 Aligned_cols=31 Identities=32% Similarity=0.460 Sum_probs=26.4
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
|||-|.| .|.||+.+++.+.+.+ .+++++.-
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 45 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAG-HDLVLIHR 45 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CEEEEEec
Confidence 5899999 7999999999998874 78887754
No 411
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=70.57 E-value=5 Score=33.74 Aligned_cols=140 Identities=11% Similarity=0.151 Sum_probs=69.3
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCE---EEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK---PVTVFG 80 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~---~i~v~~ 80 (188)
-+|.|+|.|.+|...++.+....-.+++++.- +.+.+..+.+ +|. + ..++-+ .-.+ .
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~~~~----lGa----~--------~vi~~~~~~~~~~-~ 256 (380)
T 1vj0_A 197 KTVVIQGAGPLGLFGVVIARSLGAENVIVIAG---SPNRLKLAEE----IGA----D--------LTLNRRETSVEER-R 256 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBSEEEEEES---CHHHHHHHHH----TTC----S--------EEEETTTSCHHHH-H
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCceEEEEcC---CHHHHHHHHH----cCC----c--------EEEeccccCcchH-H
Confidence 37999999999999988877664247777753 2344433322 121 0 011100 0000 0
Q ss_pred ecCCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCCCCeEEeecCcc--CCCCCCceEEcCChhhHh
Q 029791 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEN--EYKPELNIVSNASCTTNC 158 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d~p~~V~gvN~~--~~~~~~~iis~~sCtT~~ 158 (188)
....++. ...++|+||||+|.....+.+...++.|-+-|++..++...+. .++.. .+..+..+...-..+...
T Consensus 257 -~~v~~~~-~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~---~~~~~~~~~~~~~~i~g~~~~~~~~ 331 (380)
T 1vj0_A 257 -KAIMDIT-HGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPV---PFKVYEWLVLKNATFKGIWVSDTSH 331 (380)
T ss_dssp -HHHHHHT-TTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCE---EECHHHHTTTTTCEEEECCCCCHHH
T ss_pred -HHHHHHh-CCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCe---eEchHHHHHhCCeEEEEeecCCHHH
Confidence 0000000 1137999999999654555666667655432223222201121 12222 232334455443334556
Q ss_pred HHHHHHHHHh
Q 029791 159 LAPLAKVIHD 168 (188)
Q Consensus 159 lap~l~~l~~ 168 (188)
+.-+++.+.+
T Consensus 332 ~~~~~~l~~~ 341 (380)
T 1vj0_A 332 FVKTVSITSR 341 (380)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 7777777765
No 412
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=70.54 E-value=4.8 Score=33.10 Aligned_cols=33 Identities=21% Similarity=0.294 Sum_probs=27.3
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcC-CCceEEEEec
Q 029791 3 KVKIGING-FGRIGRLVARVILQR-DDVELVAVND 35 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~~-~~~~ivaInd 35 (188)
+++|-|-| .|.||+.+++.+.+. .+.+++++..
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r 44 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDK 44 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEEC
Confidence 36899998 799999999999873 3588888864
No 413
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=70.48 E-value=5.6 Score=31.98 Aligned_cols=31 Identities=26% Similarity=0.427 Sum_probs=26.1
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
+||-|.| .|.||+.+++.+.+.+ .+++++..
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 33 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEG-LSVVVVDN 33 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeC
Confidence 4899999 7999999999998864 78877754
No 414
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=70.37 E-value=11 Score=31.38 Aligned_cols=30 Identities=13% Similarity=0.213 Sum_probs=23.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~-~ivaIn 34 (188)
-+|.|.|.|.+|...++.+.... . +++++.
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 227 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKIAG-ASRIIAID 227 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 37999999999999888777664 5 666663
No 415
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=70.30 E-value=5.3 Score=32.17 Aligned_cols=34 Identities=24% Similarity=0.426 Sum_probs=26.7
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
|+.++|-|-| .|.||+.+++.+.+.+ .+++++.-
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r 35 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKG-YEVYGADR 35 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEEC
Confidence 5557899999 6999999999998864 78877753
No 416
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=70.22 E-value=5.8 Score=31.97 Aligned_cols=31 Identities=26% Similarity=0.397 Sum_probs=26.4
Q ss_pred EEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 5 KIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 5 kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
||-|.| .|.||+.+++.+.+.++.+++++.-
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r 33 (345)
T 2bll_A 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDI 33 (345)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence 799999 6999999999998875678888764
No 417
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=70.17 E-value=5.9 Score=35.23 Aligned_cols=113 Identities=12% Similarity=0.122 Sum_probs=61.1
Q ss_pred ccEEEEEc-cChHHHHHHHHHHc---CC-CceEEEEecCCCchhhhhhhhh-cccccCcCCCcceEEeCCC-------ee
Q 029791 3 KVKIGING-FGRIGRLVARVILQ---RD-DVELVAVNDPFITTDYMTYMFK-YDSVHGQWKHHELKVKDDK-------TL 69 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~---~~-~~~ivaInd~~~~~~~~~~l~~-yDS~~g~~~~~~v~~~~~~-------~l 69 (188)
|.||.|.| +|-||...++.+.. .| .++++++.-- .+.+.|+...+ |.. .-+...+.. .|
T Consensus 77 mk~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaAg-~Nv~lL~eQ~~ef~P-------~~v~v~d~~~~~~L~~~l 148 (488)
T 3au8_A 77 PINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVN-KSVNELYEQAREFLP-------EYLCIHDKSVYEELKELV 148 (488)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEES-SCHHHHHHHHHHHCC-------SEEEESCGGGTHHHHTGG
T ss_pred ceEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEcC-CCHHHHHHHHHHcCC-------CEEEEcCHHHHHHHHHHh
Confidence 46899999 89999999988876 33 5999999864 35555544332 211 111111100 01
Q ss_pred EE-CCEEEEEEeecC-CCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeC
Q 029791 70 LF-GEKPVTVFGVRN-PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA 125 (188)
Q Consensus 70 ~i-~g~~i~v~~~~~-p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ 125 (188)
.- .|..++++...+ ..++- ...++|+|+-+.-.+....-.-..+++|. ++.+.+
T Consensus 149 ~~~~~~~~~v~~G~egl~e~a-~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK-~IALAN 204 (488)
T 3au8_A 149 KNIKDYKPIILCGDEGMKEIC-SSNSIDKIVIGIDSFQGLYSTMYAIMNNK-IVALAN 204 (488)
T ss_dssp GGSTTCCCEEEEHHHHHHHHH-HCTTCCEEEECCCHHHHHHHHHHHHHTTC-EEEECC
T ss_pred hhhcCCCceEEeCHHHHHHHh-cCCCCCEEEEccccHhHHHHHHHHHHCCC-cEEEec
Confidence 00 111223332211 11110 01258999988777666665556778884 555543
No 418
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=69.99 E-value=5.4 Score=34.32 Aligned_cols=30 Identities=17% Similarity=0.354 Sum_probs=25.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.||+|+|-|.+||.+++++.+. +++++++.
T Consensus 36 ~~IlIlG~G~lg~~~~~aa~~l-G~~v~v~d 65 (419)
T 4e4t_A 36 AWLGMVGGGQLGRMFCFAAQSM-GYRVAVLD 65 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998876 48877773
No 419
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=69.86 E-value=4.8 Score=33.52 Aligned_cols=24 Identities=21% Similarity=0.335 Sum_probs=20.7
Q ss_pred ccEEEEEcc-ChHHHHHHHHHHcCC
Q 029791 3 KVKIGINGF-GRIGRLVARVILQRD 26 (188)
Q Consensus 3 ~~kvgI~G~-GriGr~~~r~~~~~~ 26 (188)
++||.|.|. |.+|..++..+...+
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~ 29 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGD 29 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC
Confidence 479999996 999999988887655
No 420
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=69.83 E-value=6 Score=32.51 Aligned_cols=33 Identities=24% Similarity=0.423 Sum_probs=24.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
+||+|+|.|.+|..++..+...+.+.-+.+.|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~ 33 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDR 33 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 389999999999999888876653333445565
No 421
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=69.24 E-value=6.1 Score=31.99 Aligned_cols=33 Identities=24% Similarity=0.353 Sum_probs=27.2
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
|+ ++|-|.| .|.||+.+++.+.+.+ .+++++..
T Consensus 1 M~-~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 34 (348)
T 1ek6_A 1 MA-EKVLVTGGAGYIGSHTVLELLEAG-YLPVVIDN 34 (348)
T ss_dssp CC-SEEEEETTTSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEec
Confidence 54 6999999 7999999999998764 77777753
No 422
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=69.20 E-value=5.1 Score=34.88 Aligned_cols=32 Identities=19% Similarity=0.111 Sum_probs=26.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~ 37 (188)
.||+|+|+|++|+..++.+.... .++ .+.|..
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lG-a~V-~v~D~~ 222 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLG-AVV-SATDVR 222 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEE-EEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CEE-EEEcCC
Confidence 69999999999999999888764 664 466763
No 423
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=69.20 E-value=12 Score=31.16 Aligned_cols=30 Identities=17% Similarity=0.247 Sum_probs=23.4
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~-~ivaIn 34 (188)
-+|.|.|.|.+|...++.+.... . +++++.
T Consensus 192 ~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~ 222 (373)
T 2fzw_A 192 SVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVD 222 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 47999999999999888776554 5 666664
No 424
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=68.95 E-value=5.5 Score=33.30 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=26.0
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
++||+|+|.|.+|..++..+...+-+.-+.+.|.
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di 42 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 4799999999999988887776554444555666
No 425
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=68.87 E-value=10 Score=30.79 Aligned_cols=30 Identities=17% Similarity=0.376 Sum_probs=24.6
Q ss_pred EEEEEcc-ChHHHHHHHHHHcCCCceEEEEec
Q 029791 5 KIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 5 kvgI~G~-GriGr~~~r~~~~~~~~~ivaInd 35 (188)
+|.|.|. |.+|...++.+.... .+++++..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~G-a~Vi~~~~ 179 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLG-YQVAAVSG 179 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHHHcC-CEEEEEeC
Confidence 4899996 999999988887664 68888764
No 426
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=68.54 E-value=4.7 Score=30.91 Aligned_cols=33 Identities=21% Similarity=0.357 Sum_probs=26.0
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCc-eEEEEec
Q 029791 3 KVKIGING-FGRIGRLVARVILQRDDV-ELVAVND 35 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~~~~~-~ivaInd 35 (188)
.++|-|.| .|.||+.+++.+.+.+.+ +++++.-
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r 52 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGR 52 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEES
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEc
Confidence 35899999 799999999999877532 7776653
No 427
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=68.50 E-value=6.2 Score=32.47 Aligned_cols=32 Identities=31% Similarity=0.452 Sum_probs=23.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCC-CceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRD-DVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~-~~~ivaInd~ 36 (188)
+||+|+|.|.+|..++..+...+ ..+++.+ |.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~-D~ 33 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLL-DV 33 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEE-CS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE-eC
Confidence 38999999999999988877643 3555444 44
No 428
>2jv8_A Uncharacterized protein NE1242; solution structure, NESG, structural genomics, unknown function, PSI-2; NMR {Nitrosomonas europaea atcc 19718}
Probab=68.17 E-value=4.1 Score=25.83 Aligned_cols=33 Identities=15% Similarity=0.450 Sum_probs=24.3
Q ss_pred CCCcceEEeCCCeeEECCEEEEEEeecCCCCCCcc
Q 029791 56 WKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWA 90 (188)
Q Consensus 56 ~~~~~v~~~~~~~l~i~g~~i~v~~~~~p~~~~w~ 90 (188)
|.++++..+++.+|.+|||.|... .|.-+-+|.
T Consensus 8 feggtidieddtsltingkeisyv--hdavknkws 40 (73)
T 2jv8_A 8 FEGGTIDIEDDTSLTINGKEISYV--HDAVKNKWS 40 (73)
T ss_dssp ETTEEEEEETTEEEEETTEECCCC--CCSSSCCCC
T ss_pred ecCCeeeeccCceeEECCEEeehH--HHHHhcccc
Confidence 344788888888899999998753 455555675
No 429
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=68.11 E-value=16 Score=30.37 Aligned_cols=30 Identities=17% Similarity=0.287 Sum_probs=23.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~-~ivaIn 34 (188)
-+|.|.|.|.+|...++.+.... . +++++.
T Consensus 194 ~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~ 224 (374)
T 1cdo_A 194 STCAVFGLGAVGLAAVMGCHSAG-AKRIIAVD 224 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEEc
Confidence 47999999999999888877664 5 676664
No 430
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=67.47 E-value=6.8 Score=32.35 Aligned_cols=90 Identities=12% Similarity=0.181 Sum_probs=50.3
Q ss_pred cEEEEE-ccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeec
Q 029791 4 VKIGIN-GFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 4 ~kvgI~-G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
-+|.|. |.|.+|...++.+.... .+++++.. +.+.+.++.++ |. + ..++-+. .+ . .
T Consensus 152 ~~VlV~gg~G~vG~~a~qla~~~G-a~Vi~~~~---~~~~~~~~~~l----Ga----~--------~vi~~~~-~~-~-~ 208 (346)
T 3fbg_A 152 KTLLIINGAGGVGSIATQIAKAYG-LRVITTAS---RNETIEWTKKM----GA----D--------IVLNHKE-SL-L-N 208 (346)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEECC---SHHHHHHHHHH----TC----S--------EEECTTS-CH-H-H
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeC---CHHHHHHHHhc----CC----c--------EEEECCc-cH-H-H
Confidence 478999 59999999988887664 68887754 34444444321 11 0 1111100 00 0 0
Q ss_pred CCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCC
Q 029791 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA 118 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Ga 118 (188)
...++ ...++|+||||+|.....+.+-..++.|-
T Consensus 209 ~~~~~--~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G 242 (346)
T 3fbg_A 209 QFKTQ--GIELVDYVFCTFNTDMYYDDMIQLVKPRG 242 (346)
T ss_dssp HHHHH--TCCCEEEEEESSCHHHHHHHHHHHEEEEE
T ss_pred HHHHh--CCCCccEEEECCCchHHHHHHHHHhccCC
Confidence 00111 12379999999996544455556666554
No 431
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=67.44 E-value=7 Score=32.21 Aligned_cols=31 Identities=23% Similarity=0.323 Sum_probs=26.3
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
++|-|.| .|.||+.+++.+.+.+ .+++++.-
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 56 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKG-YEVHGIVR 56 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred cEEEEECCCchHHHHHHHHHHHCC-CEEEEEEC
Confidence 5899999 7999999999998864 78887754
No 432
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=67.36 E-value=6.6 Score=32.60 Aligned_cols=30 Identities=23% Similarity=0.296 Sum_probs=24.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~-~ivaIn 34 (188)
-+|.|+|.|.+|...++.+.... . +++++.
T Consensus 173 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 203 (356)
T 1pl8_A 173 HKVLVCGAGPIGMVTLLVAKAMG-AAQVVVTD 203 (356)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 47999999999999888777664 6 777765
No 433
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=67.26 E-value=6.6 Score=31.66 Aligned_cols=30 Identities=27% Similarity=0.512 Sum_probs=25.7
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
++|-|-| .|.||+.+++.+.+. +.+++++.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~ 32 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQ-GIDLIVFD 32 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred cEEEEeCCCchhHHHHHHHHHhC-CCEEEEEe
Confidence 4899999 799999999999886 47888775
No 434
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=67.21 E-value=6 Score=34.65 Aligned_cols=31 Identities=26% Similarity=0.403 Sum_probs=26.1
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.+||+++|+|.+|..++..+.+. +.++++.+
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-G~~V~~~D 38 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-GHEVVCVD 38 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-CCEEEEEe
Confidence 47999999999999999988876 47777664
No 435
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=67.17 E-value=7.6 Score=35.80 Aligned_cols=102 Identities=12% Similarity=0.156 Sum_probs=52.7
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC-CCchhhhhh--hhhcccccCcCCCcceEEeCCCeeEEC-CEEEEEE
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP-FITTDYMTY--MFKYDSVHGQWKHHELKVKDDKTLLFG-EKPVTVF 79 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~-~~~~~~~~~--l~~yDS~~g~~~~~~v~~~~~~~l~i~-g~~i~v~ 79 (188)
.||.|+|.|-+|..+++.|...+ +.-+.|.|. ..+...+.. |+..+. -|+.. .++-.+ .-..+| +-.|...
T Consensus 18 s~VlVVGaGGLGsevak~La~aG-VG~ItlvD~D~Ve~SNLnRQflf~~~d-VGk~K-Aeaaa~--~L~~iNP~v~V~a~ 92 (640)
T 1y8q_B 18 GRVLVVGAGGIGCELLKNLVLTG-FSHIDLIDLDTIDVSNLNRQFLFQKKH-VGRSK-AQVAKE--SVLQFYPKANIVAY 92 (640)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CCEEEEEECCBCCGGGGGTCTTCCGGG-TTSBH-HHHHHH--HHHTTCTTCEEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHHcC-CCeEEEecCCEEChhhcCCCcCCChhH-cChHH-HHHHHH--HHHHHCCCCeEEEE
Confidence 68999999999999999987653 544555554 234444432 222222 34433 221110 000112 1233332
Q ss_pred eec-CCCCCC--cccCCccEEEeecCcccCHHhHH
Q 029791 80 GVR-NPEEIP--WAETGAEYVVESTGVFTDKDKAA 111 (188)
Q Consensus 80 ~~~-~p~~~~--w~~~~vdiV~e~tg~~~~~~~~~ 111 (188)
..+ +..++. | -.+.|+|++|+..+.++....
T Consensus 93 ~~~i~~~~~~~~~-~~~~DlVvda~Dn~~aR~~ln 126 (640)
T 1y8q_B 93 HDSIMNPDYNVEF-FRQFILVMNALDNRAARNHVN 126 (640)
T ss_dssp ESCTTSTTSCHHH-HTTCSEEEECCSCHHHHHHHH
T ss_pred ecccchhhhhHhh-hcCCCEEEECCCCHHHHHHHH
Confidence 221 112221 1 137899999999886665443
No 436
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=66.60 E-value=7.6 Score=32.35 Aligned_cols=31 Identities=23% Similarity=0.415 Sum_probs=26.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
.||+|+|-|..||.+++++.+.+ ++++.+..
T Consensus 2 ~~Ililg~g~~g~~~~~a~~~~G-~~v~~~~~ 32 (380)
T 3ax6_A 2 KKIGIIGGGQLGKMMTLEAKKMG-FYVIVLDP 32 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 48999999999999999988764 78877753
No 437
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=66.30 E-value=5.9 Score=32.61 Aligned_cols=31 Identities=29% Similarity=0.385 Sum_probs=24.1
Q ss_pred cEEEEEccC-hHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGINGFG-RIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G~G-riGr~~~r~~~~~~~~~ivaInd 35 (188)
-+|.|.|.| .||...++.+.... .+++++..
T Consensus 146 ~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~ 177 (340)
T 3gms_A 146 DVLLVNACGSAIGHLFAQLSQILN-FRLIAVTR 177 (340)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHT-CEEEEEES
T ss_pred CEEEEeCCccHHHHHHHHHHHHcC-CEEEEEeC
Confidence 478999975 99999888777654 68877753
No 438
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=66.29 E-value=7 Score=32.37 Aligned_cols=32 Identities=16% Similarity=0.301 Sum_probs=26.3
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
++|.|.| .|.||+.+++.+.+.+..+|+++.-
T Consensus 33 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r 65 (377)
T 2q1s_A 33 TNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDN 65 (377)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCceEEEEEC
Confidence 6899999 7999999999998764278777743
No 439
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=66.18 E-value=7.7 Score=31.48 Aligned_cols=32 Identities=31% Similarity=0.598 Sum_probs=26.7
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
+++|-|.| .|.||+.+++.+.+.+ .+++++.-
T Consensus 21 ~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 53 (333)
T 2q1w_A 21 MKKVFITGICGQIGSHIAELLLERG-DKVVGIDN 53 (333)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEEC
Confidence 36899999 7999999999998764 78877753
No 440
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=66.16 E-value=5.5 Score=30.31 Aligned_cols=35 Identities=20% Similarity=0.068 Sum_probs=23.8
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
|||.|+.|+|.|--||.++..+.... .++++.-|.
T Consensus 1 ~~m~~~~I~Gagg~gk~v~~~~~~~~-~~v~~f~Dd 35 (194)
T 3bfp_A 1 ARTEKIYIYGASGHGLVCEDVAKNMG-YKECIFLDD 35 (194)
T ss_dssp CCCSEEEEEC--CHHHHHHHHHHHHT-CSEEEEEC-
T ss_pred CCCccEEEEeCCHHHHHHHHHHHhCC-CeEEEEEeC
Confidence 34468999999999999998775433 666666663
No 441
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=65.83 E-value=18 Score=29.58 Aligned_cols=137 Identities=12% Similarity=0.181 Sum_probs=67.5
Q ss_pred cEEEEEcc-ChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeec
Q 029791 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 4 ~kvgI~G~-GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
.+|.|.|. |.+|+..++.+.... .+++++.. +.+.+..+.++ |. . ..+...+.+ + . .
T Consensus 168 ~~vlV~Gasg~iG~~~~~~a~~~G-~~Vi~~~~---~~~~~~~~~~~----ga-~-~~~d~~~~~-~----------~-~ 225 (343)
T 2eih_A 168 DDVLVMAAGSGVSVAAIQIAKLFG-ARVIATAG---SEDKLRRAKAL----GA-D-ETVNYTHPD-W----------P-K 225 (343)
T ss_dssp CEEEECSTTSTTHHHHHHHHHHTT-CEEEEEES---SHHHHHHHHHH----TC-S-EEEETTSTT-H----------H-H
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-CEEEEEeC---CHHHHHHHHhc----CC-C-EEEcCCccc-H----------H-H
Confidence 47999997 999999998887664 67777643 23333333221 11 0 000000000 0 0 0
Q ss_pred CCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeC-CCCCCCeEEeecCccC-CCCCCceEEcCChhhHhHH
Q 029791 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA-PSKDAPMFVVGVNENE-YKPELNIVSNASCTTNCLA 160 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~-ps~d~p~~V~gvN~~~-~~~~~~iis~~sCtT~~la 160 (188)
...++. ...++|+||||+| ....+.+-..++.|-+ ++.-+ ++.+.+ .++... +..+..+...-..+...+.
T Consensus 226 ~~~~~~-~~~~~d~vi~~~g-~~~~~~~~~~l~~~G~-~v~~g~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~ 298 (343)
T 2eih_A 226 EVRRLT-GGKGADKVVDHTG-ALYFEGVIKATANGGR-IAIAGASSGYEG----TLPFAHVFYRQLSILGSTMASKSRLF 298 (343)
T ss_dssp HHHHHT-TTTCEEEEEESSC-SSSHHHHHHHEEEEEE-EEESSCCCSCCC----CCCTTHHHHTTCEEEECCSCCGGGHH
T ss_pred HHHHHh-CCCCceEEEECCC-HHHHHHHHHhhccCCE-EEEEecCCCCcC----ccCHHHHHhCCcEEEEecCccHHHHH
Confidence 000000 1137999999999 5556666666665443 33322 222111 122221 1123344443333455677
Q ss_pred HHHHHHHhh
Q 029791 161 PLAKVIHDK 169 (188)
Q Consensus 161 p~l~~l~~~ 169 (188)
.+++.+.+.
T Consensus 299 ~~~~l~~~g 307 (343)
T 2eih_A 299 PILRFVEEG 307 (343)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHcC
Confidence 777777653
No 442
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=65.69 E-value=6.6 Score=32.06 Aligned_cols=32 Identities=9% Similarity=0.066 Sum_probs=26.7
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
.++|-|-| .|.||+.+++.+.+.+ .+++++.-
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 41 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTMG-ATVKGYSL 41 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CeEEEEeC
Confidence 36899999 7999999999998864 78777754
No 443
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=65.09 E-value=6.6 Score=32.93 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=28.5
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 2 ~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
++.||.|.|-|.+++.+++++.+. +++++++..+
T Consensus 6 ~~~~ilI~g~g~~~~~~~~a~~~~-G~~~v~v~~~ 39 (403)
T 4dim_A 6 DNKRLLILGAGRGQLGLYKAAKEL-GIHTIAGTMP 39 (403)
T ss_dssp CCCEEEEECCCGGGHHHHHHHHHH-TCEEEEEECS
T ss_pred CCCEEEEECCcHhHHHHHHHHHHC-CCEEEEEcCC
Confidence 357999999999999999998876 5899999643
No 444
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=65.02 E-value=7.1 Score=32.50 Aligned_cols=33 Identities=21% Similarity=0.351 Sum_probs=23.6
Q ss_pred cEEEEEc-cChHHHHHHHHHHcC-CCceEEEEecC
Q 029791 4 VKIGING-FGRIGRLVARVILQR-DDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~-~~~~ivaInd~ 36 (188)
+||+|+| .|.+|..++..+... +-..-+.+-|.
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di 35 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDI 35 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEec
Confidence 4899999 899999998888654 43333444454
No 445
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=64.89 E-value=7.2 Score=32.42 Aligned_cols=33 Identities=27% Similarity=0.259 Sum_probs=24.8
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCC-ceEEEEecC
Q 029791 3 KVKIGING-FGRIGRLVARVILQRDD-VELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~~~~-~~ivaInd~ 36 (188)
++||+|.| .|.+|..++..+.+.+- .+++.+ |.
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~-Di 42 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLY-DV 42 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEE-ES
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEE-eC
Confidence 47999999 89999999988876642 355554 53
No 446
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=64.65 E-value=9.1 Score=31.75 Aligned_cols=32 Identities=28% Similarity=0.325 Sum_probs=26.7
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
+++|-|.| .|.||+.+++.+.+.+ .+++++.-
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 61 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEG-HYVIASDW 61 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCeEEEECCccHHHHHHHHHHHHCC-CeEEEEEC
Confidence 36899999 6999999999998874 78877754
No 447
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=64.35 E-value=5.6 Score=33.15 Aligned_cols=31 Identities=26% Similarity=0.307 Sum_probs=24.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
-+|.|.|.|.+|...++.+.... .+++++.-
T Consensus 182 ~~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~ 212 (366)
T 2cdc_A 182 RKVLVVGTGPIGVLFTLLFRTYG-LEVWMANR 212 (366)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEeC
Confidence 57999999999999988877654 57777653
No 448
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=64.32 E-value=5.9 Score=34.85 Aligned_cols=38 Identities=16% Similarity=0.212 Sum_probs=28.4
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhh
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMT 44 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~ 44 (188)
|.+|+|+|+|.+|-.++-.+.+. +.+++++ |. +.+.+.
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~-G~~V~g~-Di--d~~kV~ 58 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALL-GHRVVGY-DV--NPSIVE 58 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TCEEEEE-CS--CHHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhC-CCcEEEE-EC--CHHHHH
Confidence 36999999999998877766655 5888887 54 555543
No 449
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=63.94 E-value=4.9 Score=37.32 Aligned_cols=32 Identities=16% Similarity=0.196 Sum_probs=25.4
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
..||||+|.|.+|..++..+... +++++. .|.
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~a-G~~V~l-~D~ 345 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASK-GTPILM-KDI 345 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHT-TCCEEE-ECS
T ss_pred CCEEEEECCChhhHHHHHHHHhC-CCEEEE-EEC
Confidence 35899999999999999988876 467554 454
No 450
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=63.50 E-value=8.2 Score=32.04 Aligned_cols=32 Identities=28% Similarity=0.283 Sum_probs=26.4
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
.++|.|.| .|.||+.+++.+.+.+ .+++++.-
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R 37 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVG-HHVRAQVH 37 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEEC
Confidence 46899999 7999999999998764 77777653
No 451
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=63.49 E-value=2.9 Score=32.88 Aligned_cols=32 Identities=16% Similarity=0.184 Sum_probs=25.6
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEe
Q 029791 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 1 m~~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
|| .+|-|.| .|.||+.+++.+.+.+ .+++++.
T Consensus 1 M~-~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~ 33 (267)
T 3ay3_A 1 ML-NRLLVTGAAGGVGSAIRPHLGTLA-HEVRLSD 33 (267)
T ss_dssp CE-EEEEEESTTSHHHHHHGGGGGGTE-EEEEECC
T ss_pred CC-ceEEEECCCCHHHHHHHHHHHhCC-CEEEEEe
Confidence 54 6899999 6999999999888764 6766654
No 452
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=63.40 E-value=4.9 Score=32.87 Aligned_cols=31 Identities=19% Similarity=0.425 Sum_probs=24.4
Q ss_pred EEEEEcc-ChHHHHHHHHHHcCCCceEEEEecC
Q 029791 5 KIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 5 kvgI~G~-GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
+|.|.|. |.+|...++.+.... .+++++...
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~ 184 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRG-YDVVASTGN 184 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHT-CCEEEEESS
T ss_pred eEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 7999996 999999888776654 677777653
No 453
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=63.17 E-value=8.7 Score=31.50 Aligned_cols=29 Identities=21% Similarity=0.352 Sum_probs=23.8
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEE
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaI 33 (188)
|||.|+|.|..|-.++..|... +++++-+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~-G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH-GIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCCEEEE
Confidence 6999999999999888877765 4776655
No 454
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=63.15 E-value=7.8 Score=31.66 Aligned_cols=32 Identities=19% Similarity=0.373 Sum_probs=25.9
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
++|-|.| .|.||+.+++.+.+.+..+++++..
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r 79 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDN 79 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence 6899999 6999999999998874367777754
No 455
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=63.09 E-value=9.8 Score=31.44 Aligned_cols=30 Identities=20% Similarity=0.111 Sum_probs=26.3
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.||+|+|-|..|+.+++++.+. ++++++++
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~-G~~vv~vd 31 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKA-GMKVVLVD 31 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEe
Confidence 5999999999999999988776 59999884
No 456
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=63.06 E-value=9.4 Score=31.45 Aligned_cols=31 Identities=19% Similarity=0.255 Sum_probs=26.0
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
.+|-|.| .|.||+.+++.+.+.+ .+++++.-
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~r 60 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKG-YEVHGLIR 60 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CeEEEEcCCchHHHHHHHHHHHCC-CEEEEEec
Confidence 5899999 6999999999998864 78877753
No 457
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=62.87 E-value=9.8 Score=31.22 Aligned_cols=33 Identities=27% Similarity=0.336 Sum_probs=23.7
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
+||+|.| .|.+|..++..+...+...-+.+-|.
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di 34 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDI 34 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcC
Confidence 4899999 99999999888876543322333454
No 458
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=62.72 E-value=15 Score=30.08 Aligned_cols=138 Identities=17% Similarity=0.125 Sum_probs=68.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
-+|.|.|.|-+|-..+..+......+++++.- +.+.+..+.++ |. + ..++-+.-...+ .
T Consensus 165 ~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~---~~~r~~~~~~~----Ga----~--------~~i~~~~~~~~~--~ 223 (348)
T 4eez_A 165 DWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDI---NQDKLNLAKKI----GA----D--------VTINSGDVNPVD--E 223 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTSCCEEEEEES---CHHHHHHHHHT----TC----S--------EEEEC-CCCHHH--H
T ss_pred CEEEEEcCCCccHHHHHHHHHhCCCEEEEEEC---cHHHhhhhhhc----CC----e--------EEEeCCCCCHHH--H
Confidence 37899999999998888777666688888753 23333222221 11 0 111100000000 0
Q ss_pred CCCCCcccCCccEEEeecCcccCHHhHHHHHhCCCcEEEEeCCCCCCCeEEeecCcc-CCCCCCceEEcCChhhHhHHHH
Q 029791 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEN-EYKPELNIVSNASCTTNCLAPL 162 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Gakkviis~ps~d~p~~V~gvN~~-~~~~~~~iis~~sCtT~~lap~ 162 (188)
..++ -+..++|+++||+|...+.+.+-..++.|-+-+++..+.... .++.. .+.....+..+-..+..-+.-+
T Consensus 224 v~~~-t~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~-----~~~~~~~~~~~~~i~gs~~~~~~~~~~~ 297 (348)
T 4eez_A 224 IKKI-TGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEM-----TLSVPTVVFDGVEVAGSLVGTRLDLAEA 297 (348)
T ss_dssp HHHH-TTSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEE-----EECHHHHHHSCCEEEECCSCCHHHHHHH
T ss_pred hhhh-cCCCCceEEEEeccCcchhheeheeecCCceEEEEeccCCCC-----ccCHHHHHhCCeEEEEEecCCHHHHHHH
Confidence 0000 012479999999997665555555555444323332222211 11111 1112344555444555567777
Q ss_pred HHHHHh
Q 029791 163 AKVIHD 168 (188)
Q Consensus 163 l~~l~~ 168 (188)
++.+.+
T Consensus 298 ~~l~~~ 303 (348)
T 4eez_A 298 FQFGAE 303 (348)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 777665
No 459
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=62.70 E-value=12 Score=30.77 Aligned_cols=31 Identities=19% Similarity=0.287 Sum_probs=25.2
Q ss_pred cEEEEEcc-ChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G~-GriGr~~~r~~~~~~~~~ivaInd 35 (188)
-+|.|.|. |.||...++.+.... .+++++..
T Consensus 161 ~~VlV~Gasg~iG~~~~~~a~~~G-a~Vi~~~~ 192 (342)
T 4eye_A 161 ETVLVLGAAGGIGTAAIQIAKGMG-AKVIAVVN 192 (342)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeC
Confidence 47999996 999999998887764 68887764
No 460
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=62.46 E-value=7.8 Score=31.55 Aligned_cols=31 Identities=35% Similarity=0.513 Sum_probs=25.9
Q ss_pred EEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 5 KIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 5 kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
||-|-| .|.||+.+++.+.+.++.+++++..
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r 33 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK 33 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEec
Confidence 799999 7999999999998764578887753
No 461
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=62.10 E-value=10 Score=31.27 Aligned_cols=33 Identities=27% Similarity=0.327 Sum_probs=25.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
+||+|+|.|.+|..++..+...+-+.-+.+.|.
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di 33 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDL 33 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 489999999999998887776653444555665
No 462
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=61.87 E-value=5.5 Score=32.53 Aligned_cols=31 Identities=16% Similarity=0.305 Sum_probs=25.1
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
-+|.|+| .|.+|...++.+... +.+++++..
T Consensus 154 ~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~~ 185 (321)
T 3tqh_A 154 DVVLIHAGAGGVGHLAIQLAKQK-GTTVITTAS 185 (321)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEec
Confidence 4789997 999999998888766 468888753
No 463
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=61.30 E-value=7.7 Score=31.38 Aligned_cols=33 Identities=18% Similarity=0.415 Sum_probs=25.8
Q ss_pred CccEEEEEc-cChHHHHHHHHHHcCCC------ceEEEEe
Q 029791 2 GKVKIGING-FGRIGRLVARVILQRDD------VELVAVN 34 (188)
Q Consensus 2 ~~~kvgI~G-~GriGr~~~r~~~~~~~------~~ivaIn 34 (188)
+.++|-|-| .|.||+.+++.+.+.+. .+++++.
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~ 52 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLID 52 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEE
T ss_pred cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEE
Confidence 346899999 79999999999987642 5666654
No 464
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=60.92 E-value=8.8 Score=31.71 Aligned_cols=33 Identities=21% Similarity=0.223 Sum_probs=24.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.||+|+|.|.+|..++..+....-+.-+.+.|.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di 47 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDL 47 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 699999999999988887775543333455565
No 465
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=60.71 E-value=7.5 Score=31.07 Aligned_cols=31 Identities=26% Similarity=0.414 Sum_probs=24.6
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
++|-|-| .|.||+.+++.+.+.+ .++++...
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~~~ 33 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN--EIVVIDNL 33 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS--CEEEECCC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC--CEEEEEcC
Confidence 4899999 7999999999998775 66666543
No 466
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=60.68 E-value=8.4 Score=34.13 Aligned_cols=31 Identities=29% Similarity=0.400 Sum_probs=26.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
.++.|.|+|++|+.+++.+.+. +.+++.|..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~-g~~v~vid~ 379 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK-PVPFILIDR 379 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHHC-CCCEEEEEC
Confidence 4789999999999999999876 477777754
No 467
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=60.35 E-value=9.6 Score=31.52 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=24.0
Q ss_pred cEEEEEcc-ChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~-GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
|||+|+|. |.+|..++..+...+-..-+.+-|.
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di 34 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDI 34 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeC
Confidence 48999997 9999999988876643233444455
No 468
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=60.28 E-value=11 Score=30.40 Aligned_cols=32 Identities=22% Similarity=0.425 Sum_probs=26.5
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
.++|-|-| .|.||+.+++.+.+.+ .+++++.-
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g-~~V~~~~r 52 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQG-HEILVIDN 52 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGT-CEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 46899999 6999999999998764 78777754
No 469
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=60.16 E-value=11 Score=30.91 Aligned_cols=33 Identities=21% Similarity=0.316 Sum_probs=23.9
Q ss_pred cEEEEEcc-ChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~-GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
+||.|.|. |.+|..++..+...+.+.-+.+-|.
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di 34 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGR 34 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEEC
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcC
Confidence 38999997 9999999998887653332344453
No 470
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=59.87 E-value=20 Score=29.40 Aligned_cols=30 Identities=7% Similarity=0.172 Sum_probs=22.5
Q ss_pred EEEEE-ccChHHHHHHHHHHcCCCceEEEEec
Q 029791 5 KIGIN-GFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 5 kvgI~-G~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
+|-|. |.|.||...++.+.... .+++++..
T Consensus 167 ~vli~gg~g~vG~~a~qla~~~G-a~Vi~~~~ 197 (349)
T 3pi7_A 167 AFVMTAGASQLCKLIIGLAKEEG-FRPIVTVR 197 (349)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHT-CEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 45555 69999999888777664 68888763
No 471
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=59.83 E-value=12 Score=30.05 Aligned_cols=32 Identities=28% Similarity=0.388 Sum_probs=26.4
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
+++|-|-| .|.||+.+++.+.+.+ .+++++..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHG-YDVVIADN 37 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCC-CcEEEEec
Confidence 46899999 7999999999998874 77777643
No 472
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=59.65 E-value=12 Score=30.08 Aligned_cols=32 Identities=16% Similarity=0.316 Sum_probs=26.7
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
.+||-|-| .|.||+.+++.+.+.+ .+++++..
T Consensus 14 ~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 46 (335)
T 1rpn_A 14 TRSALVTGITGQDGAYLAKLLLEKG-YRVHGLVA 46 (335)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCC-CeEEEEeC
Confidence 37999999 7999999999998874 78888764
No 473
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=59.42 E-value=9.8 Score=31.43 Aligned_cols=30 Identities=17% Similarity=0.275 Sum_probs=26.0
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.||+|.|-|..|+.+++++.+. +++++.+.
T Consensus 2 ~~Ililg~g~~~~~~~~a~~~~-G~~v~~~~ 31 (365)
T 2z04_A 2 LTVGILGGGQLGWMTILEGRKL-GFKFHVLE 31 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-TCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEe
Confidence 5899999999999999998776 58888775
No 474
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=59.24 E-value=11 Score=34.18 Aligned_cols=33 Identities=24% Similarity=0.400 Sum_probs=27.8
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
+++|-|-| .|.||+.+++.+.+.++.+++++.-
T Consensus 315 ~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r 348 (660)
T 1z7e_A 315 RTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI 348 (660)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEES
T ss_pred CceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEc
Confidence 46899999 7999999999998875578888754
No 475
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=59.14 E-value=12 Score=32.86 Aligned_cols=32 Identities=19% Similarity=0.382 Sum_probs=27.0
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
++||.|.| .|.||+.+++.+.+.+ .+|+++.-
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G-~~V~~l~R 179 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGG-HEVIQLVR 179 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 46999999 7999999999998874 78887764
No 476
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=58.67 E-value=10 Score=30.56 Aligned_cols=31 Identities=16% Similarity=0.085 Sum_probs=25.3
Q ss_pred CccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 2 ~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
|++||+|+|-| .|+.+++++.+. +++++.+.
T Consensus 1 m~m~Ililg~g-~~~~l~~a~~~~-G~~v~~~~ 31 (334)
T 2r85_A 1 MKVRIATYASH-SALQILKGAKDE-GFETIAFG 31 (334)
T ss_dssp CCSEEEEESST-THHHHHHHHHHT-TCCEEEES
T ss_pred CceEEEEECCh-hHHHHHHHHHhC-CCEEEEEE
Confidence 14799999999 999999988876 48877774
No 477
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=58.65 E-value=12 Score=29.73 Aligned_cols=31 Identities=26% Similarity=0.479 Sum_probs=25.6
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
|||-|-| .|.||+.+++.+.+.+ .+++++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 32 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELG-YEVVVVDN 32 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCC-CEEEEEeC
Confidence 3799999 6999999999998874 78777753
No 478
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=58.56 E-value=39 Score=29.50 Aligned_cols=83 Identities=19% Similarity=0.193 Sum_probs=48.4
Q ss_pred cEEEEEccChHHHH-HHHHHHcCCCceEEEEecCCCchhhhhhhhhcccccCcCCCcceEEeCCCeeEECCEEEEEEeec
Q 029791 4 VKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 4 ~kvgI~G~GriGr~-~~r~~~~~~~~~ivaInd~~~~~~~~~~l~~yDS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
.||-++|.|.+|.. +++.+.+.. .++. +.|...++ ....|-+ .| + ++....
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~G-~~V~-~~D~~~~~-~~~~l~~----------------~g--i-------~~~~g~ 74 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANEG-YQIS-GSDLAPNS-VTQHLTA----------------LG--A-------QIYFHH 74 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTT-CEEE-EECSSCCH-HHHHHHH----------------TT--C-------EEESSC
T ss_pred CEEEEEEEcHhhHHHHHHHHHhCC-CeEE-EEECCCCH-HHHHHHH----------------CC--C-------EEECCC
Confidence 58999999999996 788887774 6654 45653221 2212211 11 1 111223
Q ss_pred CCCCCCcccCCccEEEeecCcccCHHhHHHHHhCCC
Q 029791 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA 118 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~h~~~Ga 118 (188)
+++++. ++|+||=+.|.-.+........+.|.
T Consensus 75 ~~~~~~----~~d~vV~Spgi~~~~p~~~~a~~~gi 106 (494)
T 4hv4_A 75 RPENVL----DASVVVVSTAISADNPEIVAAREARI 106 (494)
T ss_dssp CGGGGT----TCSEEEECTTSCTTCHHHHHHHHTTC
T ss_pred CHHHcC----CCCEEEECCCCCCCCHHHHHHHHCCC
Confidence 455442 68999988887655544444555565
No 479
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=58.12 E-value=9.1 Score=30.98 Aligned_cols=33 Identities=15% Similarity=0.156 Sum_probs=22.5
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCC-ceEEEEe
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDD-VELVAVN 34 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~-~~ivaIn 34 (188)
|+++||.|.|-|.. ..++|.+.+..+ ++++++.
T Consensus 2 m~~~~Ili~g~g~~-~~l~~~l~~~~~~~~v~~~d 35 (331)
T 2pn1_A 2 MQKPHLLITSAGRR-AKLVEYFVKEFKTGRVSTAD 35 (331)
T ss_dssp TTCCEEEEESCTTC-HHHHHHHHHHCCSSEEEEEE
T ss_pred CccceEEEecCCch-HHHHHHHHHhcCCCEEEEEe
Confidence 77789999998853 234555554433 7887774
No 480
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=58.11 E-value=8.5 Score=30.28 Aligned_cols=33 Identities=18% Similarity=0.325 Sum_probs=25.4
Q ss_pred CCccEEEEEc-cChHHHHHHHHHHcCCCceEEEEe
Q 029791 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 1 m~~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
|++.+|-|-| .|.||+.+++.+.+.. .+++.+.
T Consensus 1 m~~k~vlVTGasg~IG~~la~~L~~~G-~~V~~~~ 34 (267)
T 3rft_A 1 MAMKRLLVTGAAGQLGRVMRERLAPMA-EILRLAD 34 (267)
T ss_dssp CCEEEEEEESTTSHHHHHHHHHTGGGE-EEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhcC-CEEEEEe
Confidence 6556799999 7999999999988764 5655543
No 481
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=58.10 E-value=13 Score=30.01 Aligned_cols=31 Identities=16% Similarity=0.292 Sum_probs=25.7
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
++|-|-| .|.||+.+++.+.+.+ .+++++..
T Consensus 10 ~~vlVTGatGfIG~~l~~~Ll~~G-~~V~~~~r 41 (338)
T 2rh8_A 10 KTACVVGGTGFVASLLVKLLLQKG-YAVNTTVR 41 (338)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCchHHHHHHHHHHHHCC-CEEEEEEc
Confidence 6899999 7999999999998864 77776543
No 482
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=57.85 E-value=13 Score=31.29 Aligned_cols=33 Identities=24% Similarity=0.373 Sum_probs=25.3
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
|++++|.|+|.|..|...+..+.+. +.+++.+.
T Consensus 1 m~~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E 33 (384)
T 2bi7_A 1 MKSKKILIVGAGFSGAVIGRQLAEK-GHQVHIID 33 (384)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHTT-TCEEEEEE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHC-CCcEEEEE
Confidence 6668999999999999888887765 46665554
No 483
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=57.57 E-value=11 Score=30.10 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=26.7
Q ss_pred CCccEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
|++.+|.|+|.|..|-..+..+... +++++-+.
T Consensus 1 m~~~~vvIIG~G~aGl~~A~~l~~~-g~~v~vie 33 (357)
T 4a9w_A 1 MDSVDVVVIGGGQSGLSAGYFLRRS-GLSYVILD 33 (357)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHS-SCCEEEEC
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHC-CCCEEEEE
Confidence 6567999999999999998888776 47766654
No 484
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=57.21 E-value=15 Score=29.95 Aligned_cols=30 Identities=20% Similarity=0.156 Sum_probs=24.2
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCc-eEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~-~ivaIn 34 (188)
.++.|+|.|.+||.+++.+.+.+ + +++..|
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G-~~~V~v~n 172 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTA-AERIDMAN 172 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CSEEEEEC
T ss_pred CEEEEECcHHHHHHHHHHHHHCC-CCEEEEEe
Confidence 58999999999999999998764 5 555444
No 485
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=57.10 E-value=13 Score=31.11 Aligned_cols=30 Identities=20% Similarity=0.243 Sum_probs=24.5
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.+|.|+|.|.+|+..++.+...+ .++++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~G-a~V~v~d 197 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLG-AQVQIFD 197 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEe
Confidence 58999999999999999888775 5655554
No 486
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=56.85 E-value=15 Score=29.46 Aligned_cols=30 Identities=27% Similarity=0.295 Sum_probs=24.9
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.++.|.|.|-+||.+++.+.+.. .+++..+
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G-~~V~v~~ 149 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLD-CAVTITN 149 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECCcHHHHHHHHHHHHcC-CEEEEEE
Confidence 58999999999999999998775 6665554
No 487
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=56.85 E-value=30 Score=29.48 Aligned_cols=39 Identities=18% Similarity=0.113 Sum_probs=28.1
Q ss_pred cEEEEEcc-ChHHHHHHHHHHcCCCceEEEEecCCCchhhhhhh
Q 029791 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (188)
Q Consensus 4 ~kvgI~G~-GriGr~~~r~~~~~~~~~ivaInd~~~~~~~~~~l 46 (188)
-+|.|.|. |.||...++.+... +.+++++.. +.+.+..+
T Consensus 222 ~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~---~~~~~~~~ 261 (447)
T 4a0s_A 222 DIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVS---SAQKEAAV 261 (447)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHT-TCEEEEEES---SHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeC---CHHHHHHH
Confidence 47999996 99999988888766 478777753 34444443
No 488
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=56.37 E-value=15 Score=30.43 Aligned_cols=32 Identities=28% Similarity=0.414 Sum_probs=26.9
Q ss_pred ccEEEEEccChHHHHHHHHHHcCCCceEEEEec
Q 029791 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
++||.|.|-|..|+.+++++... +++++.+..
T Consensus 11 ~~~ili~g~g~~~~~~~~a~~~~-G~~v~~~~~ 42 (391)
T 1kjq_A 11 ATRVMLLGSGELGKEVAIECQRL-GVEVIAVDR 42 (391)
T ss_dssp CCEEEEESCSHHHHHHHHHHHTT-TCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHc-CCEEEEEEC
Confidence 47999999999999999998876 478888753
No 489
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=56.13 E-value=14 Score=30.51 Aligned_cols=30 Identities=20% Similarity=0.200 Sum_probs=24.1
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
-+|.|.| .|.||...++.+.... .+++++.
T Consensus 169 ~~VlV~Gg~g~iG~~~~~~a~~~G-a~Vi~~~ 199 (353)
T 4dup_A 169 ESVLIHGGTSGIGTTAIQLARAFG-AEVYATA 199 (353)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcC-CEEEEEe
Confidence 4789994 8999999998887664 7877775
No 490
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=56.04 E-value=12 Score=30.32 Aligned_cols=32 Identities=22% Similarity=0.318 Sum_probs=25.4
Q ss_pred ccEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
.++|-|-| .|.||+.+++.+.+.+ .+++++.-
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r 51 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQG-RTVRGFDL 51 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC-CEEEEEeC
Confidence 46899999 6999999999998874 77777753
No 491
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=56.00 E-value=15 Score=31.22 Aligned_cols=31 Identities=35% Similarity=0.424 Sum_probs=26.7
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
+||.|+|-|.+|+.+++++.+. +++++++..
T Consensus 20 ~~ili~g~g~~g~~~~~a~~~~-G~~v~~v~~ 50 (433)
T 2dwc_A 20 QKILLLGSGELGKEIAIEAQRL-GVEVVAVDR 50 (433)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEEC
Confidence 5999999999999999999875 588888864
No 492
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=55.88 E-value=16 Score=28.96 Aligned_cols=32 Identities=19% Similarity=0.283 Sum_probs=24.1
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.||.|+|.|.+|..+++.+...+ +.-+.+.|.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~G-v~~i~lvD~ 63 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAG-VGNLTLLDF 63 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CSEEEEECC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcC-CCeEEEEcC
Confidence 58999999999999999987653 533334443
No 493
>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=55.78 E-value=14 Score=31.24 Aligned_cols=31 Identities=26% Similarity=0.289 Sum_probs=20.2
Q ss_pred CCccEEEEEccChHHHHH--HHHHHcCCCceEEEEe
Q 029791 1 MGKVKIGINGFGRIGRLV--ARVILQRDDVELVAVN 34 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~--~r~~~~~~~~~ivaIn 34 (188)
||++||+|+|-| ||.+ +..+....+ ++++++
T Consensus 13 ~~~~~vlviG~G--gr~~a~a~~~a~~~g-~v~~~~ 45 (412)
T 1vkz_A 13 MKAVRVHILGSG--GREHAIGWAFAKQGY-EVHFYP 45 (412)
T ss_dssp ---CEEEEEECS--HHHHHHHHHHHHTTC-EEEEEE
T ss_pred cccCEEEEECCC--HHHHHHHHHHHhCCC-CEEEEC
Confidence 677899999999 5554 444445566 888884
No 494
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=55.48 E-value=14 Score=29.27 Aligned_cols=32 Identities=19% Similarity=0.110 Sum_probs=25.3
Q ss_pred CccEEEEEccCh---------HHHHHHHHHHcCCCceEEEEe
Q 029791 2 GKVKIGINGFGR---------IGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 2 ~~~kvgI~G~Gr---------iGr~~~r~~~~~~~~~ivaIn 34 (188)
|++||+|+|-|. .|+.+++++.+. +++++.+.
T Consensus 1 m~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~-G~~v~~~~ 41 (306)
T 1iow_A 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREG-GIDAYPVD 41 (306)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CCcEEEEEeCCCCccceEcHHhHHHHHHHHHHC-CCeEEEEe
Confidence 247999999987 788888888776 47777775
No 495
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=55.13 E-value=8.3 Score=30.24 Aligned_cols=31 Identities=26% Similarity=0.590 Sum_probs=25.8
Q ss_pred EEEEEc-cChHHHHHHHHHHcC-CCceEEEEec
Q 029791 5 KIGING-FGRIGRLVARVILQR-DDVELVAVND 35 (188)
Q Consensus 5 kvgI~G-~GriGr~~~r~~~~~-~~~~ivaInd 35 (188)
+|-|.| .|.||+.+++.+.+. ++.+++++.-
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 34 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVR 34 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEES
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEc
Confidence 688999 699999999999876 3588888764
No 496
>1gr0_A Inositol-3-phosphate synthase; isomerase, oxidoreductase, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: NAD; 1.95A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3
Probab=54.40 E-value=15 Score=31.53 Aligned_cols=35 Identities=26% Similarity=0.311 Sum_probs=27.4
Q ss_pred ccEEEEEccChHHHHHHHHHH-cC---------------------CCceEEEEecCC
Q 029791 3 KVKIGINGFGRIGRLVARVIL-QR---------------------DDVELVAVNDPF 37 (188)
Q Consensus 3 ~~kvgI~G~GriGr~~~r~~~-~~---------------------~~~~ivaInd~~ 37 (188)
++||||+|.|..|..++..+. .+ .++++|+.-|..
T Consensus 15 ~~rVaIVGvGN~GsaLv~Gi~~yk~~~~~~~~~Gl~~~~~g~~~~~Di~iVaafDId 71 (367)
T 1gr0_A 15 EVRVAIVGVGNCASSLVQGVEYYYNADDTSTVPGLMHVRFGPYHVRDVKFVAAFDVD 71 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTTCCTTSCCTTCSCSEETTEEGGGEEEEEEEECB
T ss_pred CCCEEEECcChHHHHHHHHHHHHhccCcccccCCccccccCCccCCCeEEEEEEcCC
Confidence 479999999999999988554 22 157889988863
No 497
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=54.34 E-value=15 Score=32.69 Aligned_cols=31 Identities=19% Similarity=0.383 Sum_probs=25.3
Q ss_pred cEEEEEccChHHHHHHHHHHcCCCceEEEEecC
Q 029791 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~kvgI~G~GriGr~~~r~~~~~~~~~ivaInd~ 36 (188)
.+++|.|+|.||+.+++.+...+ .+++ +.|+
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~G-A~Vi-v~D~ 296 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAG-ARVI-VTEI 296 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEE-EEcC
Confidence 58999999999999999988764 6654 5566
No 498
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=54.10 E-value=16 Score=29.71 Aligned_cols=31 Identities=23% Similarity=0.360 Sum_probs=25.7
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEec
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaInd 35 (188)
++|-|-| .|.||+.+++.+.+.+ .+++++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 33 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKG-YEVHGIKR 33 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-CEEEEEEC
Confidence 4899999 7999999999998774 77777653
No 499
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=54.10 E-value=15 Score=29.87 Aligned_cols=30 Identities=10% Similarity=0.152 Sum_probs=24.0
Q ss_pred cEEEEEc-cChHHHHHHHHHHcCCCceEEEEe
Q 029791 4 VKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~kvgI~G-~GriGr~~~r~~~~~~~~~ivaIn 34 (188)
.+|-|.| .|.||+..++.+.... .+++++.
T Consensus 142 ~~vlV~Ga~ggiG~~~~~~a~~~G-~~V~~~~ 172 (327)
T 1qor_A 142 EQFLFHAAAGGVGLIACQWAKALG-AKLIGTV 172 (327)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHHT-CEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC-CEEEEEe
Confidence 4789999 7999999998887664 6777764
No 500
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=54.01 E-value=12 Score=31.78 Aligned_cols=35 Identities=20% Similarity=0.174 Sum_probs=27.2
Q ss_pred CCccEEEEEccChHHHHHHHHHHcC-CCceEEEEec
Q 029791 1 MGKVKIGINGFGRIGRLVARVILQR-DDVELVAVND 35 (188)
Q Consensus 1 m~~~kvgI~G~GriGr~~~r~~~~~-~~~~ivaInd 35 (188)
|++.+|.|+|.|..|-..++.+.+. ++.+++-+..
T Consensus 1 M~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~ 36 (449)
T 3kd9_A 1 MSLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEA 36 (449)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred CCcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEEC
Confidence 6668999999999999988888654 4678777754
Done!