BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>029792
MRLNLSSIISLIILALPWLQFCETVPVPTPWPERFHALTYKNLSSDGLQIAHQWYDWPRG
RNVYIIQKQLSDLLYNVEWNNGTSFYYTLGENGSCDVVHYGIGIPRPDFLDGATYLGTRF
TDGFLCNLWEKLDFIWYYEDVQTKKPVRWDFSDGISVHVMTFEVGAVLHDPLIQAPSYCF
NQDTYAKG

High Scoring Gene Products

Symbol, full name Information P value
AT3G23760 protein from Arabidopsis thaliana 5.6e-52
AT4G14100 protein from Arabidopsis thaliana 1.2e-51

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029792
        (188 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2095218 - symbol:AT3G23760 "AT3G23760" species...   539  5.6e-52   1
TAIR|locus:2831548 - symbol:AT4G14100 "AT4G14100" species...   536  1.2e-51   1


>TAIR|locus:2095218 [details] [associations]
            symbol:AT3G23760 "AT3G23760" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005773 "vacuole"
            evidence=IDA] GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
            HOGENOM:HOG000240559 ProtClustDB:CLSN2688707 EMBL:AY088284
            IPI:IPI00540172 RefSeq:NP_566739.1 UniGene:At.21852 PaxDb:Q8L9Q7
            PRIDE:Q8L9Q7 EnsemblPlants:AT3G23760.1 GeneID:821958
            KEGG:ath:AT3G23760 TAIR:At3g23760 eggNOG:NOG244690
            InParanoid:Q8L9Q7 OMA:WAKADFI PhylomeDB:Q8L9Q7
            Genevestigator:Q8L9Q7 Uniprot:Q8L9Q7
        Length = 194

 Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
 Identities = 96/161 (59%), Positives = 116/161 (72%)

Query:    23 ETVPVPTPWPERFHALTYKNLSSDGLQIAHQWYDWPRGRNVYIIQKQLSDLLYNVEWNNG 82
             E  PVP  WPE+FHAL   N  S  L+I   WYDW  GRN  IIQKQL  L Y++EWNNG
Sbjct:    30 EKEPVPAVWPEQFHALMLMN-KSGSLEIVDLWYDWVNGRNFNIIQKQLGKLTYDLEWNNG 88

Query:    83 TSFYYTLGENGSCDVVHYGIGIPRPDFLDGATYLGTRFTDGFLCNLWEKLDFIWYYEDVQ 142
             TSFYYTL  + +C  VH+ +GI RP++LDGA Y+G R  +GFLCN+WEK++F+WYYEDV 
Sbjct:    89 TSFYYTLDASKTCRTVHFEVGILRPNWLDGAKYMGQRHVNGFLCNVWEKVEFLWYYEDVV 148

Query:   143 TKKPVRWDFSDGISVHVMTFEVGAVLHDPLIQAPSYCFNQD 183
             TK+PV+W F  G   HVMTFEVGAVL D   QAP YCF+ +
Sbjct:   149 TKRPVQWIFYTGREAHVMTFEVGAVLEDEKWQAPVYCFHNE 189


>TAIR|locus:2831548 [details] [associations]
            symbol:AT4G14100 "AT4G14100" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0016757 "transferase activity,
            transferring glycosyl groups" evidence=ISS] [GO:0005773 "vacuole"
            evidence=IDA] GO:GO:0005773 EMBL:CP002687 GenomeReviews:CT486007_GR
            EMBL:Z97335 EMBL:AL161538 PIR:B71402 UniGene:At.27292
            UniGene:At.50337 EMBL:AK175690 EMBL:AK176539 EMBL:BT024590
            EMBL:AY087398 IPI:IPI00540714 RefSeq:NP_567420.1 PaxDb:Q67YC9
            PRIDE:Q67YC9 EnsemblPlants:AT4G14100.1 GeneID:827045
            KEGG:ath:AT4G14100 TAIR:At4g14100 eggNOG:NOG331462
            HOGENOM:HOG000240559 InParanoid:Q67YC9 OMA:WPHQFHA PhylomeDB:Q67YC9
            ProtClustDB:CLSN2688707 Genevestigator:Q67YC9 Uniprot:Q67YC9
        Length = 206

 Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
 Identities = 94/158 (59%), Positives = 116/158 (73%)

Query:    26 PVPTPWPERFHALTYKNLSSDGLQIAHQWYDWPRGRNVYIIQKQLSDLLYNVEWNNGTSF 85
             PVPTPWP +FHAL + N S D L +   WYDW  GRN  IIQ+QL  + Y++EWNNGTSF
Sbjct:    28 PVPTPWPHQFHALMFMNYSGD-LSMIDLWYDWTNGRNFNIIQEQLGGITYDLEWNNGTSF 86

Query:    86 YYTLGENGSCDVVHYGIGIPRPDFLDGATYLGTRFTDGFLCNLWEKLDFIWYYEDVQTKK 145
             +YTL E+ SC      +GI RP++LDGA YLG +   GFLCN+WEK+DFIWYYEDV+TK+
Sbjct:    87 FYTLDESKSCRSGQLEVGILRPNWLDGAKYLGQQNVSGFLCNVWEKVDFIWYYEDVETKR 146

Query:   146 PVRWDFSDGISVHVMTFEVGAVLHDPLIQAPSYCFNQD 183
             PV+W F  G   H+MT+EVGAVL D   QAP YCFN++
Sbjct:   147 PVQWIFYTGREAHIMTYEVGAVLEDEKWQAPVYCFNKE 184


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.141   0.488    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      188       178   0.00086  109 3  12 22  0.40    32
                                                     31  0.39    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  590 (63 KB)
  Total size of DFA:  156 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.90u 0.20s 12.10t   Elapsed:  00:00:00
  Total cpu time:  11.90u 0.20s 12.10t   Elapsed:  00:00:00
  Start:  Thu May  9 18:19:44 2013   End:  Thu May  9 18:19:44 2013

Back to top