Your job contains 1 sequence.
>029802
MRPLDEAETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLHKNRVYYVSESLV
KRATNIARPKLVSLGTCIGKFTHGGKFHLTIQALSLVAANARHKVWIKPTSEMSFLYGNH
VLKGGLGRITDSIAPGDGVVVYSMSDVPLGFGVAAKSMQDCRKLDPNGIVVLHQSDIGEY
LRMEDEL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029802
(187 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2130704 - symbol:AT4G15770 species:3702 "Arabi... 837 1.5e-83 1
UNIPROTKB|E1C494 - symbol:NIP7 "60S ribosome subunit biog... 595 6.6e-58 1
UNIPROTKB|E1BC14 - symbol:NIP7 "60S ribosome subunit biog... 580 2.5e-56 1
RGD|620069 - symbol:Nip7 "NIP7, nucleolar pre-rRNA proces... 580 2.5e-56 1
UNIPROTKB|J9NWQ0 - symbol:NIP7 "60S ribosome subunit biog... 578 4.2e-56 1
UNIPROTKB|Q9Y221 - symbol:NIP7 "60S ribosome subunit biog... 578 4.2e-56 1
UNIPROTKB|Q56P27 - symbol:NIP7 "60S ribosome subunit biog... 576 6.8e-56 1
MGI|MGI:1913414 - symbol:Nip7 "nuclear import 7 homolog (... 576 6.8e-56 1
ZFIN|ZDB-GENE-050522-256 - symbol:nip7 "nuclear import 7 ... 572 1.8e-55 1
DICTYBASE|DDB_G0295477 - symbol:nip7 "60S ribosome subuni... 524 2.2e-50 1
WB|WBGene00016607 - symbol:C43E11.9 species:6239 "Caenorh... 515 2.0e-49 1
POMBASE|SPCC320.11c - symbol:SPCC320.11c "RNA-binding pro... 510 6.7e-49 1
CGD|CAL0005065 - symbol:NIP7 species:5476 "Candida albica... 507 1.4e-48 1
UNIPROTKB|G4NBT8 - symbol:MGG_00482 "60S ribosome subunit... 502 4.7e-48 1
SGD|S000006132 - symbol:NIP7 "Nucleolar protein required ... 494 3.3e-47 1
FB|FBgn0039233 - symbol:CG7006 species:7227 "Drosophila m... 460 1.3e-43 1
ASPGD|ASPL0000028016 - symbol:AN8491 species:162425 "Emer... 458 2.2e-43 1
GENEDB_PFALCIPARUM|PF14_0635 - symbol:PF14_0635 "RNA bind... 412 1.6e-38 1
UNIPROTKB|Q8IKH0 - symbol:PF14_0635 "60S ribosome subunit... 412 1.6e-38 1
UNIPROTKB|J3QLW7 - symbol:NIP7 "60S ribosome subunit biog... 250 2.4e-21 1
UNIPROTKB|J3QRR4 - symbol:NIP7 "60S ribosome subunit biog... 216 9.5e-18 1
UNIPROTKB|J3QRD6 - symbol:NIP7 "60S ribosome subunit biog... 212 2.5e-17 1
>TAIR|locus:2130704 [details] [associations]
symbol:AT4G15770 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0042254 "ribosome biogenesis" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006626 "protein targeting to mitochondrion" evidence=RCA]
InterPro:IPR002478 InterPro:IPR016686 PIRSF:PIRSF017190
PROSITE:PS50890 SMART:SM00359 GO:GO:0005829 GO:GO:0005634
EMBL:CP002687 GO:GO:0003723 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0042255 HOGENOM:HOG000168475 KO:K07565 OMA:NGEMPFL
InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657 EMBL:BT012125
IPI:IPI00519189 RefSeq:NP_193312.5 UniGene:At.33143
ProteinModelPortal:Q6NM52 SMR:Q6NM52 STRING:Q6NM52 PRIDE:Q6NM52
EnsemblPlants:AT4G15770.1 GeneID:827257 KEGG:ath:AT4G15770
TAIR:At4g15770 InParanoid:Q6NM52 PhylomeDB:Q6NM52
ProtClustDB:CLSN2697002 Genevestigator:Q6NM52 Uniprot:Q6NM52
Length = 187
Score = 837 (299.7 bits), Expect = 1.5e-83, P = 1.5e-83
Identities = 155/187 (82%), Positives = 169/187 (90%)
Query: 1 MRPLDEAETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLHKNRVYYVSESLV 60
MRPLDE ETT VFEKLFKF GNNLK IVENPS EGP+ PG YCFRL KNRVYYVSE+LV
Sbjct: 1 MRPLDETETTVVFEKLFKFVGNNLKKIVENPSDEGPESTPGSYCFRLQKNRVYYVSEALV 60
Query: 61 KRATNIARPKLVSLGTCIGKFTHGGKFHLTIQALSLVAANARHKVWIKPTSEMSFLYGNH 120
KRATNI+R LVS GTCIGK+TH G FHLTI +L+++AANA+HKVW+KPTSEMSFLYGNH
Sbjct: 61 KRATNISRKNLVSFGTCIGKYTHAGSFHLTIMSLNILAANAKHKVWLKPTSEMSFLYGNH 120
Query: 121 VLKGGLGRITDSIAPGDGVVVYSMSDVPLGFGVAAKSMQDCRKLDPNGIVVLHQSDIGEY 180
VLKGGLGRITDSI PGDGVVV+SMSDVPLGFG+AAKS QDCRKLDPNGIVVLHQ+DIGEY
Sbjct: 121 VLKGGLGRITDSIVPGDGVVVFSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQADIGEY 180
Query: 181 LRMEDEL 187
LR ED+L
Sbjct: 181 LRGEDDL 187
>UNIPROTKB|E1C494 [details] [associations]
symbol:NIP7 "60S ribosome subunit biogenesis protein NIP7
homolog" species:9031 "Gallus gallus" [GO:0042255 "ribosome
assembly" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002478
InterPro:IPR016686 PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359
GO:GO:0005634 GO:GO:0003723 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0042255 CTD:51388 GeneTree:ENSGT00390000003591 KO:K07565
OMA:NGEMPFL InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657
EMBL:AADN02054167 IPI:IPI00600575 RefSeq:XP_414222.1
UniGene:Gga.8338 ProteinModelPortal:E1C494
Ensembl:ENSGALT00000000923 GeneID:415863 KEGG:gga:415863
NextBio:20819404 Uniprot:E1C494
Length = 180
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 117/187 (62%), Positives = 141/187 (75%)
Query: 1 MRPLDEAETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLHKNRVYYVSESLV 60
MRPL EAET AVFEKL ++ G N++ +V+ P G YCFRLH++RVYYVSE L+
Sbjct: 1 MRPLTEAETRAVFEKLGRYIGENIQLLVDRPD--------GTYCFRLHRDRVYYVSEKLL 52
Query: 61 KRATNIARPKLVSLGTCIGKFTHGGKFHLTIQALSLVAANARHKVWIKPTSEMSFLYGNH 120
K A +I R LV+LGTC GKFT KF L++ AL +A A++KVW+KP SE SFLYGNH
Sbjct: 53 KGAASIPRDSLVALGTCFGKFTKTQKFRLSVTALDFLAPYAKYKVWVKPGSEQSFLYGNH 112
Query: 121 VLKGGLGRITDSIAPGDGVVVYSMSDVPLGFGVAAKSMQDCRKLDPNGIVVLHQSDIGEY 180
VLK GLGRIT++ A GVVVYSM+DVPLGFGVAAKS QDCRK+DP IVV HQ+D+GEY
Sbjct: 113 VLKSGLGRITENTAQYQGVVVYSMADVPLGFGVAAKSTQDCRKVDPMAIVVFHQADVGEY 172
Query: 181 LRMEDEL 187
+R ED L
Sbjct: 173 VRNEDTL 179
>UNIPROTKB|E1BC14 [details] [associations]
symbol:NIP7 "60S ribosome subunit biogenesis protein NIP7
homolog" species:9913 "Bos taurus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0042255
"ribosome assembly" evidence=IEA] InterPro:IPR002478
InterPro:IPR016686 PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359
GO:GO:0005634 GO:GO:0003723 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0042255 CTD:51388 GeneTree:ENSGT00390000003591 KO:K07565
OMA:NGEMPFL InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657
EMBL:DAAA02046699 IPI:IPI00695177 RefSeq:NP_001179168.1
UniGene:Bt.46631 ProteinModelPortal:E1BC14
Ensembl:ENSBTAT00000002182 GeneID:509981 KEGG:bta:509981
NextBio:20869229 Uniprot:E1BC14
Length = 180
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 116/187 (62%), Positives = 138/187 (73%)
Query: 1 MRPLDEAETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLHKNRVYYVSESLV 60
MRPL E ET +FEK+ K+ G NL+ +V+ P G YCFRLH +RVYYVSE ++
Sbjct: 1 MRPLTEEETRVMFEKIAKYIGENLQLLVDRPD--------GTYCFRLHNDRVYYVSEKIL 52
Query: 61 KRATNIARPKLVSLGTCIGKFTHGGKFHLTIQALSLVAANARHKVWIKPTSEMSFLYGNH 120
K A NI+ KLVSLGTC GKFT KF L I AL +A A++KVWIKP +E SFLYGNH
Sbjct: 53 KLAANISGDKLVSLGTCFGKFTKTHKFRLHITALDYLAPYAKYKVWIKPGAEQSFLYGNH 112
Query: 121 VLKGGLGRITDSIAPGDGVVVYSMSDVPLGFGVAAKSMQDCRKLDPNGIVVLHQSDIGEY 180
VLK GLGRIT++ + GVVVYSM+DVPLGFGVAAKS QDCRK+DP IVV HQ+DIGEY
Sbjct: 113 VLKSGLGRITENTSQYQGVVVYSMADVPLGFGVAAKSTQDCRKVDPMAIVVFHQADIGEY 172
Query: 181 LRMEDEL 187
+R E+ L
Sbjct: 173 VRHEETL 179
>RGD|620069 [details] [associations]
symbol:Nip7 "NIP7, nucleolar pre-rRNA processing protein"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0042255
"ribosome assembly" evidence=IEA] InterPro:IPR002478
InterPro:IPR016686 PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359
RGD:620069 GO:GO:0005730 GO:GO:0003723 InterPro:IPR015947
SUPFAM:SSF88697 GO:GO:0042255 eggNOG:COG1374 CTD:51388
GeneTree:ENSGT00390000003591 HOGENOM:HOG000168475
HOVERGEN:HBG052625 KO:K07565 OMA:NGEMPFL OrthoDB:EOG45B1GK
InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657 EMBL:AF158186
EMBL:BC059114 EMBL:BC086589 IPI:IPI00204396 RefSeq:NP_620202.1
UniGene:Rn.127815 ProteinModelPortal:Q9WV50 SMR:Q9WV50
STRING:Q9WV50 PhosphoSite:Q9WV50 Ensembl:ENSRNOT00000027653
GeneID:192180 KEGG:rno:192180 UCSC:RGD:620069 InParanoid:Q9WV50
NextBio:622741 Genevestigator:Q9WV50 GermOnline:ENSRNOG00000020391
Uniprot:Q9WV50
Length = 180
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 115/187 (61%), Positives = 138/187 (73%)
Query: 1 MRPLDEAETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLHKNRVYYVSESLV 60
MRPL E ET +FEK+ K+ G NL+ +V+ P G YCFRLH +RVYYVSE ++
Sbjct: 1 MRPLTEEETRVMFEKIAKYIGENLQLLVDRPD--------GTYCFRLHNDRVYYVSEMIL 52
Query: 61 KRATNIARPKLVSLGTCIGKFTHGGKFHLTIQALSLVAANARHKVWIKPTSEMSFLYGNH 120
K A NI+ KLVSLGTC GKFT KF L + AL +A A++KVWIKP +E SFLYGNH
Sbjct: 53 KLAANISGDKLVSLGTCFGKFTKTHKFRLHVTALDFLAPYAKYKVWIKPGAEQSFLYGNH 112
Query: 121 VLKGGLGRITDSIAPGDGVVVYSMSDVPLGFGVAAKSMQDCRKLDPNGIVVLHQSDIGEY 180
VLK GLGRIT++ + GVVVYSM+DVPLGFGVAAKS QDCRK+DP IVV HQ+DIGEY
Sbjct: 113 VLKSGLGRITENTSQYQGVVVYSMADVPLGFGVAAKSTQDCRKVDPMAIVVFHQADIGEY 172
Query: 181 LRMEDEL 187
+R E+ L
Sbjct: 173 IRHEETL 179
>UNIPROTKB|J9NWQ0 [details] [associations]
symbol:NIP7 "60S ribosome subunit biogenesis protein NIP7
homolog" species:9615 "Canis lupus familiaris" [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0042255 "ribosome assembly" evidence=IEA] InterPro:IPR002478
InterPro:IPR016686 PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359
GO:GO:0005634 GO:GO:0003723 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0042255 GeneTree:ENSGT00390000003591 OMA:NGEMPFL
InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657
EMBL:AAEX03004108 Ensembl:ENSCAFT00000046330 Uniprot:J9NWQ0
Length = 190
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 115/187 (61%), Positives = 137/187 (73%)
Query: 1 MRPLDEAETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLHKNRVYYVSESLV 60
MRPL E ET +FEK+ K+ G NL+ +V+ P G YCFRLH +RVYYVSE ++
Sbjct: 11 MRPLTEEETRVMFEKMAKYIGENLQLLVDRPD--------GTYCFRLHNDRVYYVSEKIL 62
Query: 61 KRATNIARPKLVSLGTCIGKFTHGGKFHLTIQALSLVAANARHKVWIKPTSEMSFLYGNH 120
K A NI+ KLVSLGTC GKFT +F L I AL +A A++KVWIKP +E SFLYGNH
Sbjct: 63 KLAANISGDKLVSLGTCFGKFTKSHRFRLHITALDYLAPYAKYKVWIKPGAEQSFLYGNH 122
Query: 121 VLKGGLGRITDSIAPGDGVVVYSMSDVPLGFGVAAKSMQDCRKLDPNGIVVLHQSDIGEY 180
VLK GLGRIT++ GVVVYSM+DVPLGFGVAAKS QDCRK+DP IVV HQ+DIGEY
Sbjct: 123 VLKSGLGRITENTCQYQGVVVYSMADVPLGFGVAAKSTQDCRKVDPMAIVVFHQADIGEY 182
Query: 181 LRMEDEL 187
+R E+ L
Sbjct: 183 VRHEETL 189
>UNIPROTKB|Q9Y221 [details] [associations]
symbol:NIP7 "60S ribosome subunit biogenesis protein NIP7
homolog" species:9606 "Homo sapiens" [GO:0042255 "ribosome
assembly" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002478 InterPro:IPR016686
PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359 GO:GO:0005730
GO:GO:0003723 EMBL:CH471092 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0042255 eggNOG:COG1374 CTD:51388 HOGENOM:HOG000168475
HOVERGEN:HBG052625 KO:K07565 OMA:NGEMPFL OrthoDB:EOG45B1GK
InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657 EMBL:AF132971
EMBL:AF085360 EMBL:AF161528 EMBL:AB062398 EMBL:AB062479
EMBL:AB112439 EMBL:AK315355 EMBL:BC015941 IPI:IPI00007175
IPI:IPI00020793 RefSeq:NP_001186363.1 RefSeq:NP_057185.1
UniGene:Hs.585728 PDB:1SQW PDB:1T5Y PDBsum:1SQW PDBsum:1T5Y
ProteinModelPortal:Q9Y221 SMR:Q9Y221 IntAct:Q9Y221
MINT:MINT-1472771 STRING:Q9Y221 PhosphoSite:Q9Y221 DMDM:56404676
SWISS-2DPAGE:Q9Y221 PaxDb:Q9Y221 PeptideAtlas:Q9Y221 PRIDE:Q9Y221
DNASU:51388 Ensembl:ENST00000254940 Ensembl:ENST00000254941
GeneID:51388 KEGG:hsa:51388 UCSC:uc002exa.3 UCSC:uc002exb.3
GeneCards:GC16P069373 HGNC:HGNC:24328 neXtProt:NX_Q9Y221
PharmGKB:PA142671264 InParanoid:Q9Y221 PhylomeDB:Q9Y221
ChiTaRS:NIP7 EvolutionaryTrace:Q9Y221 GenomeRNAi:51388
NextBio:54909 Bgee:Q9Y221 CleanEx:HS_NIP7 Genevestigator:Q9Y221
GermOnline:ENSG00000132603 Uniprot:Q9Y221
Length = 180
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 114/187 (60%), Positives = 138/187 (73%)
Query: 1 MRPLDEAETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLHKNRVYYVSESLV 60
MRPL E ET +FEK+ K+ G NL+ +V+ P G YCFRLH +RVYYVSE ++
Sbjct: 1 MRPLTEEETRVMFEKIAKYIGENLQLLVDRPD--------GTYCFRLHNDRVYYVSEKIM 52
Query: 61 KRATNIARPKLVSLGTCIGKFTHGGKFHLTIQALSLVAANARHKVWIKPTSEMSFLYGNH 120
K A NI+ KLVSLGTC GKFT KF L + AL +A A++KVWIKP +E SFLYGNH
Sbjct: 53 KLAANISGDKLVSLGTCFGKFTKTHKFRLHVTALDYLAPYAKYKVWIKPGAEQSFLYGNH 112
Query: 121 VLKGGLGRITDSIAPGDGVVVYSMSDVPLGFGVAAKSMQDCRKLDPNGIVVLHQSDIGEY 180
VLK GLGRIT++ + GVVVYSM+D+PLGFGVAAKS QDCRK+DP IVV HQ+DIGEY
Sbjct: 113 VLKSGLGRITENTSQYQGVVVYSMADIPLGFGVAAKSTQDCRKVDPMAIVVFHQADIGEY 172
Query: 181 LRMEDEL 187
+R E+ L
Sbjct: 173 VRHEETL 179
>UNIPROTKB|Q56P27 [details] [associations]
symbol:NIP7 "60S ribosome subunit biogenesis protein NIP7
homolog" species:9823 "Sus scrofa" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0042255
"ribosome assembly" evidence=IEA] InterPro:IPR002478
InterPro:IPR016686 PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359
GO:GO:0005730 GO:GO:0003723 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0042255 eggNOG:COG1374 HSSP:Q9Y221 CTD:51388
GeneTree:ENSGT00390000003591 HOGENOM:HOG000168475
HOVERGEN:HBG052625 KO:K07565 OMA:NGEMPFL OrthoDB:EOG45B1GK
InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657 EMBL:AY864609
EMBL:AY974338 RefSeq:NP_001041536.1 UniGene:Ssc.53939
ProteinModelPortal:Q56P27 SMR:Q56P27 STRING:Q56P27
Ensembl:ENSSSCT00000003057 GeneID:595107 KEGG:ssc:595107
Uniprot:Q56P27
Length = 180
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 114/187 (60%), Positives = 138/187 (73%)
Query: 1 MRPLDEAETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLHKNRVYYVSESLV 60
MRPL E ET +FEK+ K+ G NL+ +V+ P G YCFRLH +RVYYVSE ++
Sbjct: 1 MRPLTEEETRVMFEKIAKYIGENLQLLVDRPD--------GTYCFRLHNDRVYYVSEKIL 52
Query: 61 KRATNIARPKLVSLGTCIGKFTHGGKFHLTIQALSLVAANARHKVWIKPTSEMSFLYGNH 120
K A NI+ KL+SLGTC GKFT KF L I AL +A A++KVWIKP +E SFLYGNH
Sbjct: 53 KLAANISGDKLMSLGTCFGKFTKTHKFRLHITALDYLAPYAKYKVWIKPGAEQSFLYGNH 112
Query: 121 VLKGGLGRITDSIAPGDGVVVYSMSDVPLGFGVAAKSMQDCRKLDPNGIVVLHQSDIGEY 180
VLK GLGRIT++ + GVVVYSM+D+PLGFGVAAKS QDCRK+DP IVV HQ+DIGEY
Sbjct: 113 VLKSGLGRITENTSQYQGVVVYSMADIPLGFGVAAKSTQDCRKVDPMAIVVFHQADIGEY 172
Query: 181 LRMEDEL 187
+R E+ L
Sbjct: 173 VRHEETL 179
>MGI|MGI:1913414 [details] [associations]
symbol:Nip7 "nuclear import 7 homolog (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0042255
"ribosome assembly" evidence=IEA] InterPro:IPR002478
InterPro:IPR016686 PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359
MGI:MGI:1913414 GO:GO:0005730 GO:GO:0003723 InterPro:IPR015947
SUPFAM:SSF88697 GO:GO:0042255 eggNOG:COG1374 CTD:51388
GeneTree:ENSGT00390000003591 HOGENOM:HOG000168475
HOVERGEN:HBG052625 KO:K07565 OMA:NGEMPFL OrthoDB:EOG45B1GK
InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657 EMBL:AK003739
EMBL:AK014290 EMBL:BC003972 IPI:IPI00133555 RefSeq:NP_079667.2
UniGene:Mm.334789 ProteinModelPortal:Q9CXK8 SMR:Q9CXK8
STRING:Q9CXK8 PhosphoSite:Q9CXK8 PaxDb:Q9CXK8 PRIDE:Q9CXK8
Ensembl:ENSMUST00000034392 GeneID:66164 KEGG:mmu:66164
UCSC:uc009ngz.2 InParanoid:Q9CXK8 NextBio:320822 Bgee:Q9CXK8
CleanEx:MM_NIP7 Genevestigator:Q9CXK8 GermOnline:ENSMUSG00000031917
Uniprot:Q9CXK8
Length = 180
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 113/187 (60%), Positives = 138/187 (73%)
Query: 1 MRPLDEAETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLHKNRVYYVSESLV 60
MRPL E ET +FEK+ K+ G NL+ +V+ P G YCFRLH +RVYYVSE ++
Sbjct: 1 MRPLTEEETRVMFEKIAKYIGENLQLLVDRPD--------GTYCFRLHNDRVYYVSEMML 52
Query: 61 KRATNIARPKLVSLGTCIGKFTHGGKFHLTIQALSLVAANARHKVWIKPTSEMSFLYGNH 120
K A NI+ KLVSLGTC GKFT KF L + AL +A A++KVW+KP +E SFLYGNH
Sbjct: 53 KLAANISGDKLVSLGTCFGKFTKTHKFRLHVTALDYLAPYAKYKVWVKPGAEQSFLYGNH 112
Query: 121 VLKGGLGRITDSIAPGDGVVVYSMSDVPLGFGVAAKSMQDCRKLDPNGIVVLHQSDIGEY 180
VLK GLGRIT++ + GVVVYSM+D+PLGFGVAAKS QDCRK+DP IVV HQ+DIGEY
Sbjct: 113 VLKSGLGRITENTSQYQGVVVYSMADIPLGFGVAAKSTQDCRKVDPMAIVVFHQADIGEY 172
Query: 181 LRMEDEL 187
+R E+ L
Sbjct: 173 VRHEETL 179
>ZFIN|ZDB-GENE-050522-256 [details] [associations]
symbol:nip7 "nuclear import 7 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0005634 "nucleus"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR002478 InterPro:IPR016686 PIRSF:PIRSF017190
PROSITE:PS50890 SMART:SM00359 ZFIN:ZDB-GENE-050522-256
GO:GO:0005730 GO:GO:0003723 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0042255 eggNOG:COG1374 EMBL:BC095238 IPI:IPI00607355
RefSeq:NP_001018426.1 UniGene:Dr.16108 HSSP:Q9Y221
ProteinModelPortal:Q503P2 SMR:Q503P2 STRING:Q503P2 PRIDE:Q503P2
Ensembl:ENSDART00000082087 GeneID:553616 KEGG:dre:553616 CTD:51388
GeneTree:ENSGT00390000003591 HOGENOM:HOG000168475
HOVERGEN:HBG052625 InParanoid:Q503P2 KO:K07565 OMA:NGEMPFL
OrthoDB:EOG45B1GK NextBio:20880353 Bgee:Q503P2 InterPro:IPR005155
PANTHER:PTHR23415:SF4 Pfam:PF03657 Uniprot:Q503P2
Length = 180
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 109/187 (58%), Positives = 138/187 (73%)
Query: 1 MRPLDEAETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLHKNRVYYVSESLV 60
MRPL + ET +FEKL K+ G N+K +++ P G YCFRLH +RVYY+SE ++
Sbjct: 1 MRPLTDEETKTMFEKLSKYIGENIKLLIDRPD--------GTYCFRLHNDRVYYMSEKIL 52
Query: 61 KRATNIARPKLVSLGTCIGKFTHGGKFHLTIQALSLVAANARHKVWIKPTSEMSFLYGNH 120
K ATN++R KLVS+GTC GKFT KF L I AL +A A+ KVW+KP SE SFLYGNH
Sbjct: 53 KLATNVSRDKLVSVGTCFGKFTKTQKFRLHITALDFLAPYAKFKVWVKPGSEQSFLYGNH 112
Query: 121 VLKGGLGRITDSIAPGDGVVVYSMSDVPLGFGVAAKSMQDCRKLDPNGIVVLHQSDIGEY 180
++K GLGRIT++ GV+VYSM+DVPLGFGVAA++ Q+CRK+DP IVV HQ+DIGEY
Sbjct: 113 IMKSGLGRITENTDKYQGVLVYSMADVPLGFGVAARTTQECRKVDPMAIVVFHQADIGEY 172
Query: 181 LRMEDEL 187
+R ED L
Sbjct: 173 IRSEDTL 179
>DICTYBASE|DDB_G0295477 [details] [associations]
symbol:nip7 "60S ribosome subunit biogenesis protein"
species:44689 "Dictyostelium discoideum" [GO:0042255 "ribosome
assembly" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR002478 InterPro:IPR016686 PIRSF:PIRSF017190
PROSITE:PS50890 SMART:SM00359 dictyBase:DDB_G0295477 GO:GO:0005730
GenomeReviews:CM000151_GR GO:GO:0003723 EMBL:AAFI02000006
GO:GO:0042273 InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0042255
KO:K07565 OMA:NGEMPFL InterPro:IPR005155 PANTHER:PTHR23415:SF4
Pfam:PF03657 RefSeq:XP_001732966.1 ProteinModelPortal:B0G104
SMR:B0G104 STRING:B0G104 EnsemblProtists:DDB0235213 GeneID:8618043
KEGG:ddi:DDB_G0295477 ProtClustDB:CLSZ2428891 Uniprot:B0G104
Length = 179
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 100/185 (54%), Positives = 130/185 (70%)
Query: 1 MRPLDEAETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLHKNRVYYVSESLV 60
MRP+ E E+ FEKL KF G N+ +++ +P YCFR+ KN+VYYVSE L+
Sbjct: 1 MRPMTEEESKTFFEKLIKFIGKNVTLLIQRKD----EP----YCFRIQKNKVYYVSEELM 52
Query: 61 KRATNIARPKLVSLGTCIGKFTHGGKFHLTIQALSLVAANARHKVWIKPTSEMSFLYGNH 120
KR+ NI R L SLGTC G+FT GKF L I L +A A++KVW+KP+SEMS++YGN+
Sbjct: 53 KRSQNIPREGLCSLGTCFGRFTKTGKFKLNITCLDYLAQYAKYKVWVKPSSEMSWMYGNN 112
Query: 121 VLKGGLGRITDSIAPGDGVVVYSMSDVPLGFGVAAKSMQDCRKLDPNGIVVLHQSDIGEY 180
+LK GLGRIT+ GVV++SM+DVP+GFGV +KS +CRKLDP +VV H D+GEY
Sbjct: 113 LLKAGLGRITEDTPANQGVVLFSMNDVPIGFGVTSKSTHECRKLDPQALVVYHYGDVGEY 172
Query: 181 LRMED 185
LR ED
Sbjct: 173 LRDED 177
>WB|WBGene00016607 [details] [associations]
symbol:C43E11.9 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] InterPro:IPR002478 InterPro:IPR016686
PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359 GO:GO:0005634
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0071688 GO:GO:0003723 GO:GO:0040035 InterPro:IPR015947
SUPFAM:SSF88697 GO:GO:0042255 eggNOG:COG1374 EMBL:FO080612
GeneTree:ENSGT00390000003591 HOGENOM:HOG000168475 KO:K07565
OMA:NGEMPFL InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657
PIR:D87754 RefSeq:NP_491342.1 ProteinModelPortal:P91154 SMR:P91154
IntAct:P91154 STRING:P91154 PaxDb:P91154 EnsemblMetazoa:C43E11.9.1
EnsemblMetazoa:C43E11.9.2 GeneID:172028 KEGG:cel:CELE_C43E11.9
UCSC:C43E11.9.1 CTD:172028 WormBase:C43E11.9 InParanoid:P91154
NextBio:873731 Uniprot:P91154
Length = 180
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 101/187 (54%), Positives = 127/187 (67%)
Query: 1 MRPLDEAETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLHKNRVYYVSESLV 60
MRPL E ET+ VF KL F G+N+ ++ D N G YCFR HK RVYY SE+L+
Sbjct: 1 MRPLTEEETSLVFAKLASFIGDNVSMLI--------DRNDGDYCFRNHKERVYYCSENLM 52
Query: 61 KRATNIARPKLVSLGTCIGKFTHGGKFHLTIQALSLVAANARHKVWIKPTSEMSFLYGNH 120
++A IAR L+S GTC+GKFT KFHL I AL +A A+ KVW+KP +E FLYGN+
Sbjct: 53 RQAACIAREPLLSFGTCLGKFTKSKKFHLQITALDYLAPYAKFKVWLKPNAEQQFLYGNN 112
Query: 121 VLKGGLGRITDSIAPGDGVVVYSMSDVPLGFGVAAKSMQDCRKLDPNGIVVLHQSDIGEY 180
+LK G+ R+TD G+VVYSM+DVPLGFGV+AK D ++ DP +VVLHQ D+GEY
Sbjct: 113 ILKSGIARMTDGTPTHAGIVVYSMTDVPLGFGVSAKGTSDSKRADPTALVVLHQCDLGEY 172
Query: 181 LRMEDEL 187
LR E L
Sbjct: 173 LRNESHL 179
>POMBASE|SPCC320.11c [details] [associations]
symbol:SPCC320.11c "RNA-binding protein involved in
ribosome biogenesis (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISS] [GO:0042255 "ribosome assembly"
evidence=IEA] InterPro:IPR002478 InterPro:IPR016686
PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359 PomBase:SPCC320.11c
GO:GO:0005829 GO:GO:0005730 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0042254 GO:GO:0003723 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0042255 eggNOG:COG1374 HOGENOM:HOG000168475 KO:K07565
OMA:NGEMPFL InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657
PIR:T41300 RefSeq:NP_587718.1 ProteinModelPortal:Q1MTQ9 SMR:Q1MTQ9
STRING:Q1MTQ9 EnsemblFungi:SPCC320.11c.1 GeneID:2539255
KEGG:spo:SPCC320.11c OrthoDB:EOG4SBJ77 NextBio:20800425
Uniprot:Q1MTQ9
Length = 180
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 100/187 (53%), Positives = 126/187 (67%)
Query: 1 MRPLDEAETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLHKNRVYYVSESLV 60
MRPL ET FEKL ++ G N+ ++++ P DP +CFRL K+RVYYVSE +
Sbjct: 1 MRPLTHEETKTFFEKLAQYIGKNITHLIDRPD----DP----HCFRLQKDRVYYVSERAM 52
Query: 61 KRATNIARPKLVSLGTCIGKFTHGGKFHLTIQALSLVAANARHKVWIKPTSEMSFLYGNH 120
K AT++AR L+SLG C GKFT KF L I AL +A AR+K+W+K EM FLYGNH
Sbjct: 53 KMATSVARQNLMSLGICFGKFTKTNKFRLHITALDYIAQYARYKIWVKSNGEMPFLYGNH 112
Query: 121 VLKGGLGRITDSIAPGDGVVVYSMSDVPLGFGVAAKSMQDCRKLDPNGIVVLHQSDIGEY 180
VLK +GRITD GVV+YSM+D PLGFGV A+S + R+L+P IV HQ+D+GEY
Sbjct: 113 VLKAHVGRITDDTPQHQGVVIYSMNDTPLGFGVTARSTLELRRLEPTAIVAFHQADVGEY 172
Query: 181 LRMEDEL 187
LR ED L
Sbjct: 173 LRDEDTL 179
>CGD|CAL0005065 [details] [associations]
symbol:NIP7 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IEA]
InterPro:IPR002478 InterPro:IPR016686 PROSITE:PS50890 SMART:SM00359
CGD:CAL0005065 GO:GO:0005634 GO:GO:0003723 EMBL:AACQ01000155
EMBL:AACQ01000154 InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0042255
eggNOG:COG1374 KO:K07565 InterPro:IPR005155 PANTHER:PTHR23415:SF4
Pfam:PF03657 RefSeq:XP_712517.1 RefSeq:XP_712547.1
ProteinModelPortal:Q59S61 SMR:Q59S61 STRING:Q59S61 GeneID:3645855
GeneID:3645880 KEGG:cal:CaO19.10982 KEGG:cal:CaO19.3478
Uniprot:Q59S61
Length = 262
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 101/187 (54%), Positives = 127/187 (67%)
Query: 1 MRPLDEAETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLHKNRVYYVSESLV 60
MRPL E ET VFEKL + G N+ +++NP NP + FRL K+RVYYV ES+
Sbjct: 82 MRPLTEEETKVVFEKLANYIGRNISFLIDNPE------NP--HVFRLQKDRVYYVQESIA 133
Query: 61 KRATNIARPKLVSLGTCIGKFTHGGKFHLTIQALSLVAANARHKVWIKPTSEMSFLYGNH 120
K AT+++R +L+SLGTC GKFT GKF L I +L +A A+ K+WIK EM FLYGNH
Sbjct: 134 KFATSVSRQQLMSLGTCFGKFTKTGKFRLHITSLPYLAQYAKFKIWIKQNGEMPFLYGNH 193
Query: 121 VLKGGLGRITDSIAPGDGVVVYSMSDVPLGFGVAAKSMQDCRKLDPNGIVVLHQSDIGEY 180
VLK +GR++D I GV++YSM+D+PLGFG +AKS + R L P GIV Q DIGEY
Sbjct: 194 VLKAHIGRMSDDIPEHAGVIIYSMNDIPLGFGASAKSTAEARNLPPTGIVAFRQGDIGEY 253
Query: 181 LRMEDEL 187
LR ED L
Sbjct: 254 LREEDTL 260
>UNIPROTKB|G4NBT8 [details] [associations]
symbol:MGG_00482 "60S ribosome subunit biogenesis protein
NIP7" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002478 InterPro:IPR016686
PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359 GO:GO:0005634
EMBL:CM001235 GO:GO:0003723 GO:GO:0042273 GO:GO:0030687
InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0042255 KO:K07565
InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657
RefSeq:XP_003718580.1 ProteinModelPortal:G4NBT8 SMR:G4NBT8
EnsemblFungi:MGG_00482T0 GeneID:2674100 KEGG:mgr:MGG_00482
Uniprot:G4NBT8
Length = 185
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 100/187 (53%), Positives = 127/187 (67%)
Query: 1 MRPLDEAETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLHKNRVYYVSESLV 60
MRPL + ET + KL +TGN+LK+++ P +G RY FRLHK+RVYYV S+
Sbjct: 1 MRPLTDTETQTLLAKLANYTGNSLKSLIA-PLEDGD-----RYVFRLHKDRVYYVKLSIA 54
Query: 61 KRATNIARPKLVSLGTCIGKFTHGGKFHLTIQALSLVAANARHKVWIKPTSEMSFLYGNH 120
AT IAR KL+SLGTC+GKFT GKF L I AL +++ +AR+K+W++ EM FLYG +
Sbjct: 55 NLATTIARDKLMSLGTCLGKFTKSGKFRLHITALPILSEHARYKMWVRSNGEMPFLYGGN 114
Query: 121 VLKGGLGRITDSIAPGDGVVVYSMSDVPLGFGVAAKSMQDCRKLDPNGIVVLHQSDIGEY 180
V+K +GR TD G+VVY+M DVPLGFG+ AKS D R+LDP GI QSD GEY
Sbjct: 115 VVKAHVGRQTDDCPEHQGIVVYNMQDVPLGFGLTAKSTADARRLDPTGITCFRQSDCGEY 174
Query: 181 LRMEDEL 187
LR ED L
Sbjct: 175 LRDEDAL 181
>SGD|S000006132 [details] [associations]
symbol:NIP7 "Nucleolar protein required for 60S ribosome
subunit biogenesis" species:4932 "Saccharomyces cerevisiae"
[GO:0042255 "ribosome assembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;TAS] [GO:0000027 "ribosomal large subunit
assembly" evidence=TAS] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=TAS] [GO:0006364 "rRNA processing" evidence=TAS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0042273
"ribosomal large subunit biogenesis" evidence=IPI] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] InterPro:IPR002478
InterPro:IPR016686 PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359
SGD:S000006132 GO:GO:0005730 GO:GO:0003723 EMBL:BK006949
GO:GO:0030687 InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0006364
GO:GO:0000027 eggNOG:COG1374 GO:GO:0022625
GeneTree:ENSGT00390000003591 HOGENOM:HOG000168475 KO:K07565
OMA:NGEMPFL InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657
OrthoDB:EOG4SBJ77 EMBL:Z73567 EMBL:AY558059 PIR:S65230
RefSeq:NP_015113.1 ProteinModelPortal:Q08962 SMR:Q08962
DIP:DIP-1456N IntAct:Q08962 MINT:MINT-400883 STRING:Q08962
PaxDb:Q08962 PeptideAtlas:Q08962 EnsemblFungi:YPL211W GeneID:855890
KEGG:sce:YPL211W CYGD:YPL211w NextBio:980562 Genevestigator:Q08962
GermOnline:YPL211W Uniprot:Q08962
Length = 181
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 99/187 (52%), Positives = 131/187 (70%)
Query: 1 MRPLDEAETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLHKNRVYYVSESLV 60
MR L E ET VFEKL + G N+ +V+N E P + FRL K+RVYYV + +
Sbjct: 1 MRQLTEEETKVVFEKLAGYIGRNISFLVDNK--ELP------HVFRLQKDRVYYVPDHVA 52
Query: 61 KRATNIARPKLVSLGTCIGKFTHGGKFHLTIQALSLVAANARHKVWIKPTSEMSFLYGNH 120
K AT++ARP L+SLG C+GKFT GKF L I +L+++A +A++K+WIKP EM FLYGNH
Sbjct: 53 KLATSVARPNLMSLGICLGKFTKTGKFRLHITSLTVLAKHAKYKIWIKPNGEMPFLYGNH 112
Query: 121 VLKGGLGRITDSIAPGDGVVVYSMSDVPLGFGVAAKSMQDCRKLDPNGIVVLHQSDIGEY 180
VLK +G+++D I GV+V++M+DVPLGFGV+AKS + R + P GIV Q+DIGEY
Sbjct: 113 VLKAHVGKMSDDIPEHAGVIVFAMNDVPLGFGVSAKSTSESRNMQPTGIVAFRQADIGEY 172
Query: 181 LRMEDEL 187
LR ED L
Sbjct: 173 LRDEDTL 179
>FB|FBgn0039233 [details] [associations]
symbol:CG7006 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IEA] [GO:0042255 "ribosome assembly"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002478 InterPro:IPR016686 PIRSF:PIRSF017190
PROSITE:PS50890 SMART:SM00359 EMBL:AE014297 GO:GO:0005634
GO:GO:0003723 InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0042255
eggNOG:COG1374 GeneTree:ENSGT00390000003591 KO:K07565 OMA:NGEMPFL
InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657 EMBL:AY075367
RefSeq:NP_651296.1 UniGene:Dm.5514 SMR:Q9VC28 MINT:MINT-749224
STRING:Q9VC28 EnsemblMetazoa:FBtr0084704 GeneID:42963
KEGG:dme:Dmel_CG7006 UCSC:CG7006-RA FlyBase:FBgn0039233
InParanoid:Q9VC28 OrthoDB:EOG47SQWX GenomeRNAi:42963 NextBio:831550
Uniprot:Q9VC28
Length = 180
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 94/189 (49%), Positives = 124/189 (65%)
Query: 1 MRPLDEAETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLHKNRVYYVSESLV 60
M+ L + +FE L K+ G N+K++++ P G YCFR HK+RVYYVSE ++
Sbjct: 1 MKRLSDERAKILFEHLSKYIGTNVKHLIDRPD--------GTYCFREHKDRVYYVSERIL 52
Query: 61 KRATNIARPKLVSLGTCIGKF--THGGKFHLTIQALSLVAANARHKVWIKPTSEMSFLYG 118
K + +LV +GTC GKF T+ KFH+T AL +A A++KVW+KP+ E FLYG
Sbjct: 53 KLSECFGYKQLVCVGTCFGKFSKTNKLKFHIT--ALYYLAPYAQYKVWVKPSFEQQFLYG 110
Query: 119 NHVLKGGLGRITDSIAPGDGVVVYSMSDVPLGFGVAAKSMQDCRKLDPNGIVVLHQSDIG 178
NH+ K GLGRIT++ GVVVYSM+D+PLGFGV A+S DC+ DP V HQSDIG
Sbjct: 111 NHIPKTGLGRITENAGQYQGVVVYSMNDLPLGFGVLARSTTDCKTADPMTTVCFHQSDIG 170
Query: 179 EYLRMEDEL 187
EY+R ED L
Sbjct: 171 EYIRAEDTL 179
>ASPGD|ASPL0000028016 [details] [associations]
symbol:AN8491 species:162425 "Emericella nidulans"
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR002478
InterPro:IPR016686 PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359
GO:GO:0005634 GO:GO:0003723 EMBL:BN001305 GO:GO:0042273
GO:GO:0030687 InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0042255
EMBL:AACD01000153 eggNOG:COG1374 HOGENOM:HOG000168475 KO:K07565
OMA:NGEMPFL InterPro:IPR005155 PANTHER:PTHR23415:SF4 Pfam:PF03657
OrthoDB:EOG4SBJ77 RefSeq:XP_681760.1 ProteinModelPortal:Q5AT89
STRING:Q5AT89 EnsemblFungi:CADANIAT00002979 GeneID:2868792
KEGG:ani:AN8491.2 Uniprot:Q5AT89
Length = 188
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 92/187 (49%), Positives = 122/187 (65%)
Query: 1 MRPLDEAETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLHKNRVYYVSESLV 60
MRPL E ET +F+KL ++ G+ LK +++ P P N RY FRL NRVYY S+
Sbjct: 1 MRPLTEEETQTLFKKLAEYCGSGLKELIK-PLDSSP--NADRYVFRLSGNRVYYSLLSIA 57
Query: 61 KRATNIARPKLVSLGTCIGKFTHGGKFHLTIQALSLVAANARHKVWIKPTSEMSFLYGNH 120
AT R +L+SLG C+GKFT GKF L I AL ++A +AR+K+WIKP M FLYG++
Sbjct: 58 NAATAFPRDQLLSLGICMGKFTKTGKFRLHITALPIIAEHARNKIWIKPNGVMPFLYGSN 117
Query: 121 VLKGGLGRITDSIAPGDGVVVYSMSDVPLGFGVAAKSMQDCRKLDPNGIVVLHQSDIGEY 180
V K + ++ D +A GV+V + DVPLGFG+ A+S + R+LDP GIV Q+D GEY
Sbjct: 118 VAKAHVAKLPDEMAEHSGVIVCTQDDVPLGFGITARSTAEARRLDPTGIVCFRQADCGEY 177
Query: 181 LRMEDEL 187
LR ED L
Sbjct: 178 LRDEDTL 184
>GENEDB_PFALCIPARUM|PF14_0635 [details] [associations]
symbol:PF14_0635 "RNA binding protein,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002478 InterPro:IPR016686
PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359 GO:GO:0005634
GO:GO:0003723 EMBL:AE014187 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0042255 HOGENOM:HOG000168475 KO:K07565 InterPro:IPR005155
PANTHER:PTHR23415:SF4 Pfam:PF03657 ProtClustDB:CLSZ2428891
RefSeq:XP_001348809.2 ProteinModelPortal:Q8IKH0
EnsemblProtists:PF14_0635:mRNA GeneID:812217 KEGG:pfa:PF14_0635
EuPathDB:PlasmoDB:PF3D7_1466700 Uniprot:Q8IKH0
Length = 179
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 80/184 (43%), Positives = 121/184 (65%)
Query: 1 MRPLDEAETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLHKNRVYYVSESLV 60
MRPL++ ET VF+KL KF GNNL ++ + E Y RLH++ VY+V +
Sbjct: 1 MRPLNDQETMIVFKKLSKFVGNNLLTMLSYSNEE--------YILRLHRSNVYFVRADVA 52
Query: 61 KRATNIARPKLVSLGTCIGKFTHGGKFHLTIQALSLVAANARHKVWIKPTSEMSFLYGNH 120
K+A ++ + L+S+G C+GKFT F + I A+S + HK+W+K + E +FL+GN+
Sbjct: 53 KQAESLNKNSLISMGICLGKFTKTNNFFIKITAISFLNQFCIHKIWLKESGEKNFLFGNN 112
Query: 121 VLKGGLGRITDSIAPGDGVVVYSMSDVPLGFGVAAKSMQDCRKLDPNGIVVLHQSDIGEY 180
VLK L +I+D+I GDG++V SM+D P+GFG++ ++ QD + L+ V++HQSDIGEY
Sbjct: 113 VLKSHLLKISDNIKKGDGIMVLSMNDNPIGFGISVRNTQDIKILNVTDTVLIHQSDIGEY 172
Query: 181 LRME 184
LR E
Sbjct: 173 LRCE 176
>UNIPROTKB|Q8IKH0 [details] [associations]
symbol:PF14_0635 "60S ribosome subunit biogenesis protein
NIP7 homolog" species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002478 InterPro:IPR016686
PIRSF:PIRSF017190 PROSITE:PS50890 SMART:SM00359 GO:GO:0005634
GO:GO:0003723 EMBL:AE014187 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0042255 HOGENOM:HOG000168475 KO:K07565 InterPro:IPR005155
PANTHER:PTHR23415:SF4 Pfam:PF03657 ProtClustDB:CLSZ2428891
RefSeq:XP_001348809.2 ProteinModelPortal:Q8IKH0
EnsemblProtists:PF14_0635:mRNA GeneID:812217 KEGG:pfa:PF14_0635
EuPathDB:PlasmoDB:PF3D7_1466700 Uniprot:Q8IKH0
Length = 179
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 80/184 (43%), Positives = 121/184 (65%)
Query: 1 MRPLDEAETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLHKNRVYYVSESLV 60
MRPL++ ET VF+KL KF GNNL ++ + E Y RLH++ VY+V +
Sbjct: 1 MRPLNDQETMIVFKKLSKFVGNNLLTMLSYSNEE--------YILRLHRSNVYFVRADVA 52
Query: 61 KRATNIARPKLVSLGTCIGKFTHGGKFHLTIQALSLVAANARHKVWIKPTSEMSFLYGNH 120
K+A ++ + L+S+G C+GKFT F + I A+S + HK+W+K + E +FL+GN+
Sbjct: 53 KQAESLNKNSLISMGICLGKFTKTNNFFIKITAISFLNQFCIHKIWLKESGEKNFLFGNN 112
Query: 121 VLKGGLGRITDSIAPGDGVVVYSMSDVPLGFGVAAKSMQDCRKLDPNGIVVLHQSDIGEY 180
VLK L +I+D+I GDG++V SM+D P+GFG++ ++ QD + L+ V++HQSDIGEY
Sbjct: 113 VLKSHLLKISDNIKKGDGIMVLSMNDNPIGFGISVRNTQDIKILNVTDTVLIHQSDIGEY 172
Query: 181 LRME 184
LR E
Sbjct: 173 LRCE 176
>UNIPROTKB|J3QLW7 [details] [associations]
symbol:NIP7 "60S ribosome subunit biogenesis protein NIP7
homolog" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IEA]
InterPro:IPR016686 GO:GO:0005634 GO:GO:0042255 EMBL:AC026464
PANTHER:PTHR23415:SF4 HGNC:HGNC:24328 ChiTaRS:NIP7
ProteinModelPortal:J3QLW7 Ensembl:ENST00000569637 Uniprot:J3QLW7
Length = 110
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 53/102 (51%), Positives = 66/102 (64%)
Query: 1 MRPLDEAETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLHKNRVYYVSESLV 60
MRPL E ET +FEK+ K+ G NL+ +V+ P G YCFRLH +RVYYVSE ++
Sbjct: 1 MRPLTEEETRVMFEKIAKYIGENLQLLVDRPD--------GTYCFRLHNDRVYYVSEKIM 52
Query: 61 KRATNIARPKLVSLGTCIGKFTHGGKFHLTIQALSLVAANAR 102
K A NI+ KLVSLGTC GKFT KF L + AL +A A+
Sbjct: 53 KLAANISGDKLVSLGTCFGKFTKTHKFRLHVTALDYLAPYAK 94
>UNIPROTKB|J3QRR4 [details] [associations]
symbol:NIP7 "60S ribosome subunit biogenesis protein NIP7
homolog" species:9606 "Homo sapiens" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0042255
"ribosome assembly" evidence=IEA] InterPro:IPR002478
InterPro:IPR016686 PROSITE:PS50890 GO:GO:0005634 GO:GO:0003723
InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0042255 EMBL:AC026464
PANTHER:PTHR23415:SF4 HGNC:HGNC:24328 ChiTaRS:NIP7
Ensembl:ENST00000567202 Uniprot:J3QRR4
Length = 79
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 43/71 (60%), Positives = 53/71 (74%)
Query: 82 THGGKFHLTIQALSLVAANARHKVWIKPTSEMSFLYGNHVLKGGLGRITDSIAPGDGVVV 141
TH KF L + AL +A A++KVWIKP +E SFLYGNHVLK GLGRIT++ + GVVV
Sbjct: 3 TH--KFRLHVTALDYLAPYAKYKVWIKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVV 60
Query: 142 YSMSDVPLGFG 152
YSM+D+PL G
Sbjct: 61 YSMADIPLTLG 71
>UNIPROTKB|J3QRD6 [details] [associations]
symbol:NIP7 "60S ribosome subunit biogenesis protein NIP7
homolog" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IEA]
InterPro:IPR016686 GO:GO:0005634 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0042255 EMBL:AC026464 PANTHER:PTHR23415:SF4 HGNC:HGNC:24328
ChiTaRS:NIP7 Ensembl:ENST00000562523 Uniprot:J3QRD6
Length = 70
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 42/68 (61%), Positives = 52/68 (76%)
Query: 82 THGGKFHLTIQALSLVAANARHKVWIKPTSEMSFLYGNHVLKGGLGRITDSIAPGDGVVV 141
TH KF L + AL +A A++KVWIKP +E SFLYGNHVLK GLGRIT++ + GVVV
Sbjct: 1 TH--KFRLHVTALDYLAPYAKYKVWIKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVV 58
Query: 142 YSMSDVPL 149
YSM+D+PL
Sbjct: 59 YSMADIPL 66
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.138 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 187 187 0.00085 110 3 11 22 0.45 32
31 0.41 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 591 (63 KB)
Total size of DFA: 159 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.84u 0.09s 16.93t Elapsed: 00:00:01
Total cpu time: 16.84u 0.09s 16.93t Elapsed: 00:00:01
Start: Tue May 21 00:25:01 2013 End: Tue May 21 00:25:02 2013