Citrus Sinensis ID: 029802

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------

MRPLDEAETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLHKNRVYYVSESLVKRATNIARPKLVSLGTCIGKFTHGGKFHLTIQALSLVAANARHKVWIKPTSEMSFLYGNHVLKGGLGRITDSIAPGDGVVVYSMSDVPLGFGVAAKSMQDCRKLDPNGIVVLHQSDIGEYLRMEDEL

cccccHHHHHHHHHHHHHHHcccHHHHHccccccccccccccEEEEECccEEEEEHHHHHHHHcccccccCEEcEEEEEEEECccCEEEEEccHHHHHHHcccEEEEcccccccEEcccccccccccccccccccccEEEEEEcccccEEEEEEEccHHHHHcccccCEEEEEccccEEEEcccccc

*RPLDEAETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLHKNRVYYVSESLVKRATNIARPKLVSLGTCIGKFTHGGKFHLTIQALSLVAANARHKVWIKPTSEMSFLYGNHVLKGGLGRITDSIAPGDGVVVYSMSDVPLGFGVAAKSMQDCRKLDPNGIVVLHQSDIGEYLRMED**

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MRPLDEAETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLHKNRVYYVSESLVKRATNIARPKLVSLGTCIGKFTHGGKFHLTIQALSLVAANARHKVWIKPTSEMSFLYGNHVLKGGLGRITDSIAPGDGVVVYSMSDVPLGFGVAAKSMQDCRKLDPNGIVVLHQSDIGEYLRMEDEL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
60S ribosome subunit biogenesis protein NIP7 homolog	Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly.	probable	Q9WV50
60S ribosome subunit biogenesis protein NIP7 homolog	Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly.	probable	Q9Y221
60S ribosome subunit biogenesis protein NIP7 homolog	Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly.	probable	Q56P27

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1SQW, chain A
Confidence level:very confident
Coverage over the Query: 1-184
View the alignment between query and template
View the model in PyMOL