Query 029803
Match_columns 187
No_of_seqs 172 out of 1943
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 05:43:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029803.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029803hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3r3h_A O-methyltransferase, SA 100.0 3.4E-34 1.2E-38 217.5 20.2 180 1-187 42-221 (242)
2 3c3y_A Pfomt, O-methyltransfer 100.0 2.2E-33 7.6E-38 212.4 21.5 186 1-187 52-237 (237)
3 3dr5_A Putative O-methyltransf 100.0 1.4E-33 4.9E-38 211.3 19.9 174 2-186 36-213 (221)
4 1sui_A Caffeoyl-COA O-methyltr 100.0 4.9E-33 1.7E-37 211.7 20.4 186 1-187 61-247 (247)
5 3duw_A OMT, O-methyltransferas 100.0 3E-31 1E-35 198.4 22.6 179 1-187 40-223 (223)
6 3cbg_A O-methyltransferase; cy 100.0 2E-31 6.7E-36 201.0 21.5 179 1-186 54-232 (232)
7 3tr6_A O-methyltransferase; ce 100.0 1.9E-31 6.5E-36 199.7 21.2 179 1-186 46-224 (225)
8 3tfw_A Putative O-methyltransf 100.0 7.6E-31 2.6E-35 199.7 22.2 177 1-187 45-226 (248)
9 3ntv_A MW1564 protein; rossman 100.0 2.1E-31 7.3E-36 200.8 18.6 176 3-186 55-231 (232)
10 2avd_A Catechol-O-methyltransf 100.0 2.5E-30 8.5E-35 194.1 22.6 179 1-186 51-229 (229)
11 2hnk_A SAM-dependent O-methylt 100.0 1.6E-28 5.6E-33 185.6 21.1 180 1-186 42-231 (239)
12 3c3p_A Methyltransferase; NP_9 100.0 6.9E-29 2.4E-33 184.1 18.4 170 3-186 40-209 (210)
13 3u81_A Catechol O-methyltransf 100.0 5.6E-28 1.9E-32 180.7 18.3 164 1-186 40-213 (221)
14 2gpy_A O-methyltransferase; st 100.0 5.8E-27 2E-31 176.3 17.0 178 3-187 38-215 (233)
15 3cvo_A Methyltransferase-like 99.8 7.2E-20 2.5E-24 134.1 14.7 148 2-174 15-182 (202)
16 2wk1_A NOVP; transferase, O-me 99.8 1.2E-19 4E-24 139.5 13.4 158 4-186 87-281 (282)
17 2o07_A Spermidine synthase; st 99.8 1.6E-18 5.3E-23 135.3 10.8 149 17-186 93-256 (304)
18 2b2c_A Spermidine synthase; be 99.8 3.6E-18 1.2E-22 133.8 12.4 150 17-186 106-269 (314)
19 2bm8_A Cephalosporin hydroxyla 99.8 2.2E-18 7.5E-23 129.9 9.7 116 5-131 67-188 (236)
20 3njr_A Precorrin-6Y methylase; 99.8 1.5E-17 5E-22 122.7 13.6 116 5-132 41-156 (204)
21 3jwh_A HEN1; methyltransferase 99.8 1.3E-17 4.3E-22 123.8 13.0 168 4-179 14-194 (217)
22 3e05_A Precorrin-6Y C5,15-meth 99.8 7.7E-18 2.6E-22 123.9 11.7 119 5-132 26-144 (204)
23 3jwg_A HEN1, methyltransferase 99.8 1.6E-17 5.6E-22 123.2 13.2 167 5-179 15-194 (219)
24 3p9n_A Possible methyltransfer 99.7 8.2E-17 2.8E-21 117.0 16.2 116 9-132 32-155 (189)
25 4gek_A TRNA (CMO5U34)-methyltr 99.7 1.8E-17 6E-22 126.8 12.6 116 9-133 58-181 (261)
26 3fpf_A Mtnas, putative unchara 99.7 1E-17 3.6E-22 129.2 11.2 106 14-131 117-223 (298)
27 1uir_A Polyamine aminopropyltr 99.7 5E-17 1.7E-21 127.3 14.7 151 17-186 75-242 (314)
28 3hm2_A Precorrin-6Y C5,15-meth 99.7 1.9E-17 6.4E-22 118.9 10.5 115 9-132 15-129 (178)
29 1mjf_A Spermidine synthase; sp 99.7 1.8E-16 6.2E-21 122.4 16.1 148 16-186 72-239 (281)
30 3mti_A RRNA methylase; SAM-dep 99.7 1E-16 3.5E-21 115.9 13.8 102 18-129 21-134 (185)
31 2esr_A Methyltransferase; stru 99.7 5.4E-17 1.8E-21 116.6 12.2 108 17-132 29-140 (177)
32 1xdz_A Methyltransferase GIDB; 99.7 2.5E-16 8.5E-21 118.7 15.7 105 18-129 69-173 (240)
33 1xj5_A Spermidine synthase 1; 99.7 9.9E-17 3.4E-21 126.5 13.6 111 17-133 118-239 (334)
34 3dxy_A TRNA (guanine-N(7)-)-me 99.7 2.8E-16 9.7E-21 117.0 15.1 105 19-129 34-149 (218)
35 2fhp_A Methylase, putative; al 99.7 1.7E-16 5.9E-21 114.6 13.2 110 18-132 43-156 (187)
36 1iy9_A Spermidine synthase; ro 99.7 2.7E-16 9.3E-21 121.0 14.3 107 17-130 73-189 (275)
37 1l3i_A Precorrin-6Y methyltran 99.7 3.7E-16 1.3E-20 113.0 13.9 117 5-131 19-135 (192)
38 3eey_A Putative rRNA methylase 99.7 1.6E-16 5.6E-21 116.0 12.1 108 17-130 20-139 (197)
39 2ift_A Putative methylase HI07 99.7 2.1E-16 7.3E-21 116.1 12.6 117 9-132 43-165 (201)
40 3m6w_A RRNA methylase; rRNA me 99.7 4.1E-16 1.4E-20 127.5 15.4 119 7-133 89-232 (464)
41 3orh_A Guanidinoacetate N-meth 99.7 6.3E-17 2.2E-21 121.9 9.4 116 9-133 48-173 (236)
42 1inl_A Spermidine synthase; be 99.7 4.2E-16 1.4E-20 121.1 14.2 106 17-129 88-204 (296)
43 1ws6_A Methyltransferase; stru 99.7 9.7E-16 3.3E-20 109.0 14.9 106 19-132 41-149 (171)
44 3ajd_A Putative methyltransfer 99.7 1.4E-15 4.7E-20 117.0 16.4 121 9-133 73-214 (274)
45 3m4x_A NOL1/NOP2/SUN family pr 99.7 6.1E-16 2.1E-20 126.3 14.6 121 6-133 92-237 (456)
46 2pt6_A Spermidine synthase; tr 99.7 1.5E-15 5.3E-20 119.2 16.2 106 17-129 114-229 (321)
47 3gjy_A Spermidine synthase; AP 99.7 4.9E-16 1.7E-20 121.2 13.0 107 17-130 85-200 (317)
48 2fpo_A Methylase YHHF; structu 99.7 6.9E-16 2.4E-20 113.5 13.1 105 18-131 53-161 (202)
49 3adn_A Spermidine synthase; am 99.7 2.5E-16 8.4E-21 122.3 11.2 107 17-130 81-198 (294)
50 3grz_A L11 mtase, ribosomal pr 99.7 1.3E-15 4.5E-20 111.9 14.4 114 7-132 47-161 (205)
51 3lpm_A Putative methyltransfer 99.7 1.7E-16 5.9E-21 120.9 9.9 114 8-128 37-174 (259)
52 1dus_A MJ0882; hypothetical pr 99.7 2.6E-16 8.8E-21 114.0 10.3 113 9-132 42-159 (194)
53 1nkv_A Hypothetical protein YJ 99.7 1.8E-16 6.2E-21 120.1 9.8 114 10-133 27-143 (256)
54 3hem_A Cyclopropane-fatty-acyl 99.7 7.8E-16 2.7E-20 119.7 13.6 116 7-134 57-187 (302)
55 2igt_A SAM dependent methyltra 99.7 6.1E-15 2.1E-19 116.3 18.7 109 18-132 152-274 (332)
56 1ixk_A Methyltransferase; open 99.7 5.2E-16 1.8E-20 121.6 12.5 121 5-133 104-249 (315)
57 3mb5_A SAM-dependent methyltra 99.7 1.5E-16 5E-21 120.8 9.0 116 5-130 79-194 (255)
58 3f4k_A Putative methyltransfer 99.7 1.1E-16 3.8E-21 121.3 8.3 116 9-133 36-153 (257)
59 2ozv_A Hypothetical protein AT 99.7 1.2E-16 4.1E-21 122.0 8.4 118 10-128 27-168 (260)
60 2yxd_A Probable cobalt-precorr 99.7 3.9E-15 1.3E-19 106.8 16.0 112 5-131 21-132 (183)
61 3dh0_A SAM dependent methyltra 99.7 7.5E-16 2.6E-20 114.1 12.1 112 15-134 33-147 (219)
62 3dlc_A Putative S-adenosyl-L-m 99.7 2.6E-16 8.9E-21 116.2 9.6 116 9-133 31-151 (219)
63 2nxc_A L11 mtase, ribosomal pr 99.7 7.5E-15 2.6E-19 111.7 17.7 113 7-132 107-220 (254)
64 3g89_A Ribosomal RNA small sub 99.7 5.1E-16 1.7E-20 117.8 11.1 104 19-129 80-183 (249)
65 2b3t_A Protein methyltransfera 99.7 3.1E-15 1E-19 115.0 15.3 116 4-129 92-237 (276)
66 4dzr_A Protein-(glutamine-N5) 99.7 1.5E-15 5.1E-20 111.8 13.0 120 4-129 11-164 (215)
67 3kkz_A Uncharacterized protein 99.7 1.2E-16 4E-21 122.1 7.2 108 17-133 44-153 (267)
68 2i7c_A Spermidine synthase; tr 99.7 6.2E-15 2.1E-19 113.9 16.6 107 17-130 76-192 (283)
69 3kr9_A SAM-dependent methyltra 99.7 7.5E-16 2.6E-20 114.8 10.9 113 11-131 6-120 (225)
70 1sqg_A SUN protein, FMU protei 99.7 3.5E-15 1.2E-19 121.5 15.7 159 4-187 231-428 (429)
71 2fca_A TRNA (guanine-N(7)-)-me 99.7 1.9E-15 6.5E-20 112.0 13.0 105 18-129 37-152 (213)
72 3lbf_A Protein-L-isoaspartate 99.7 5.7E-16 1.9E-20 114.2 9.8 112 4-129 62-173 (210)
73 1yzh_A TRNA (guanine-N(7)-)-me 99.6 1.1E-15 3.6E-20 113.3 11.1 105 18-129 40-155 (214)
74 2b78_A Hypothetical protein SM 99.6 1.8E-14 6E-19 115.8 18.6 109 18-131 211-332 (385)
75 1zx0_A Guanidinoacetate N-meth 99.6 9.8E-16 3.3E-20 115.1 10.4 115 9-132 48-172 (236)
76 2frn_A Hypothetical protein PH 99.6 2.3E-15 7.8E-20 116.0 12.5 104 18-132 124-227 (278)
77 3evz_A Methyltransferase; NYSG 99.6 2.1E-15 7.2E-20 112.6 11.9 103 17-129 53-178 (230)
78 3ckk_A TRNA (guanine-N(7)-)-me 99.6 4.7E-15 1.6E-19 111.6 13.7 107 17-129 44-167 (235)
79 3gu3_A Methyltransferase; alph 99.6 9E-16 3.1E-20 118.4 10.0 114 9-132 12-128 (284)
80 3lec_A NADB-rossmann superfami 99.6 1.7E-15 5.8E-20 113.1 10.9 113 11-131 12-126 (230)
81 3a27_A TYW2, uncharacterized p 99.6 7.1E-16 2.4E-20 118.5 8.9 117 5-132 105-221 (272)
82 1jsx_A Glucose-inhibited divis 99.6 1.2E-15 4.3E-20 112.0 9.8 100 19-129 65-164 (207)
83 3c0k_A UPF0064 protein YCCW; P 99.6 7.7E-15 2.6E-19 118.3 15.0 112 15-131 216-340 (396)
84 2yxl_A PH0851 protein, 450AA l 99.6 3.3E-15 1.1E-19 122.4 12.7 124 4-133 244-392 (450)
85 1nv8_A HEMK protein; class I a 99.6 5.4E-15 1.8E-19 114.2 13.1 114 5-129 106-248 (284)
86 2pbf_A Protein-L-isoaspartate 99.6 2E-15 7E-20 112.5 10.3 115 9-129 69-192 (227)
87 4htf_A S-adenosylmethionine-de 99.6 4.2E-15 1.4E-19 114.5 12.1 104 19-131 68-174 (285)
88 3gnl_A Uncharacterized protein 99.6 2.1E-15 7.2E-20 113.5 10.1 113 11-131 12-126 (244)
89 2as0_A Hypothetical protein PH 99.6 1.4E-14 4.9E-19 116.8 15.6 108 19-131 217-336 (396)
90 1o54_A SAM-dependent O-methylt 99.6 2.7E-15 9.2E-20 115.3 10.9 112 9-130 102-213 (277)
91 3g07_A 7SK snRNA methylphospha 99.6 1.1E-15 3.9E-20 118.4 8.4 114 18-134 45-224 (292)
92 1dl5_A Protein-L-isoaspartate 99.6 2.1E-15 7.2E-20 118.2 9.8 114 6-130 62-175 (317)
93 3bus_A REBM, methyltransferase 99.6 5.5E-15 1.9E-19 113.0 11.9 118 7-133 46-169 (273)
94 1pjz_A Thiopurine S-methyltran 99.6 4.5E-15 1.5E-19 109.2 10.9 115 4-128 8-138 (203)
95 3ocj_A Putative exported prote 99.6 1.5E-15 5.2E-20 118.2 8.9 109 17-133 116-230 (305)
96 3fzg_A 16S rRNA methylase; met 99.6 7.4E-14 2.5E-18 100.8 16.9 147 18-187 48-198 (200)
97 3g5t_A Trans-aconitate 3-methy 99.6 5.9E-15 2E-19 114.5 12.1 117 10-128 25-147 (299)
98 2yxe_A Protein-L-isoaspartate 99.6 2.7E-15 9.1E-20 110.9 9.6 114 5-129 63-176 (215)
99 3sso_A Methyltransferase; macr 99.6 2.4E-14 8.1E-19 114.4 15.6 155 18-187 215-393 (419)
100 1kpg_A CFA synthase;, cyclopro 99.6 1.1E-14 3.8E-19 112.2 13.1 115 7-133 49-171 (287)
101 2fk8_A Methoxy mycolic acid sy 99.6 9.5E-15 3.3E-19 114.2 12.9 114 8-133 76-197 (318)
102 3gdh_A Trimethylguanosine synt 99.6 6.3E-16 2.1E-20 116.3 5.7 112 7-129 66-180 (241)
103 1wxx_A TT1595, hypothetical pr 99.6 7.6E-15 2.6E-19 117.8 11.7 106 19-131 209-326 (382)
104 3mgg_A Methyltransferase; NYSG 99.6 2.8E-15 9.6E-20 114.9 8.7 107 17-132 35-144 (276)
105 3lcc_A Putative methyl chlorid 99.6 5.1E-15 1.7E-19 110.9 9.9 104 19-133 66-174 (235)
106 4df3_A Fibrillarin-like rRNA/T 99.6 2.4E-15 8.1E-20 112.6 8.0 107 17-130 75-182 (233)
107 1xxl_A YCGJ protein; structura 99.6 6.7E-15 2.3E-19 110.7 10.5 116 7-133 9-127 (239)
108 1vl5_A Unknown conserved prote 99.6 4.7E-15 1.6E-19 112.7 9.6 107 15-132 33-142 (260)
109 2frx_A Hypothetical protein YE 99.6 1.2E-14 4E-19 119.7 12.5 121 6-133 102-249 (479)
110 3htx_A HEN1; HEN1, small RNA m 99.6 5.5E-14 1.9E-18 120.5 16.8 160 11-179 713-900 (950)
111 1u2z_A Histone-lysine N-methyl 99.6 1.4E-14 4.7E-19 117.5 12.7 114 15-135 238-364 (433)
112 2o57_A Putative sarcosine dime 99.6 4.8E-15 1.7E-19 114.7 9.6 109 16-133 79-190 (297)
113 2gb4_A Thiopurine S-methyltran 99.6 6.7E-15 2.3E-19 111.9 10.1 115 6-129 55-190 (252)
114 3dtn_A Putative methyltransfer 99.6 1.4E-15 4.7E-20 113.9 6.2 105 17-133 42-151 (234)
115 2b25_A Hypothetical protein; s 99.6 5.1E-15 1.7E-19 116.8 9.7 115 8-129 94-218 (336)
116 3k6r_A Putative transferase PH 99.6 4.3E-15 1.5E-19 114.1 8.9 105 17-132 123-227 (278)
117 1i1n_A Protein-L-isoaspartate 99.6 4.3E-15 1.5E-19 110.7 8.7 113 8-130 65-182 (226)
118 3bwc_A Spermidine synthase; SA 99.6 8.2E-15 2.8E-19 114.3 10.6 106 18-129 94-209 (304)
119 4dmg_A Putative uncharacterize 99.6 1.8E-14 6.1E-19 115.9 12.6 103 19-132 214-328 (393)
120 3v97_A Ribosomal RNA large sub 99.6 2.9E-14 1E-18 122.3 14.7 112 13-132 533-659 (703)
121 2vdv_E TRNA (guanine-N(7)-)-me 99.6 7E-15 2.4E-19 111.2 9.6 105 19-129 49-172 (246)
122 4dcm_A Ribosomal RNA large sub 99.6 3.8E-15 1.3E-19 119.3 8.4 104 17-129 220-333 (375)
123 2pwy_A TRNA (adenine-N(1)-)-me 99.6 5.9E-15 2E-19 111.9 9.0 112 9-130 86-198 (258)
124 3ofk_A Nodulation protein S; N 99.6 2.3E-15 7.8E-20 111.3 6.5 108 9-130 41-154 (216)
125 2p7i_A Hypothetical protein; p 99.6 3.8E-15 1.3E-19 111.9 7.7 108 8-131 31-142 (250)
126 3vc1_A Geranyl diphosphate 2-C 99.6 2.6E-15 9E-20 117.3 7.0 108 17-133 115-224 (312)
127 1nt2_A Fibrillarin-like PRE-rR 99.6 1.1E-14 3.7E-19 107.8 10.0 104 18-129 56-160 (210)
128 3id6_C Fibrillarin-like rRNA/T 99.6 2.5E-14 8.4E-19 107.2 11.9 106 17-129 74-180 (232)
129 1jg1_A PIMT;, protein-L-isoasp 99.6 9.4E-15 3.2E-19 109.7 9.6 112 5-129 77-188 (235)
130 3dp7_A SAM-dependent methyltra 99.6 2.8E-14 9.5E-19 113.8 12.7 110 18-135 178-292 (363)
131 1yb2_A Hypothetical protein TA 99.6 2.2E-15 7.6E-20 115.8 6.0 110 10-130 101-211 (275)
132 3m70_A Tellurite resistance pr 99.6 2.3E-14 7.9E-19 110.4 11.7 105 15-132 116-225 (286)
133 1i9g_A Hypothetical protein RV 99.6 8.6E-15 2.9E-19 112.4 9.2 117 5-130 85-203 (280)
134 2yvl_A TRMI protein, hypotheti 99.6 1.3E-14 4.4E-19 109.4 9.8 114 5-130 77-190 (248)
135 3thr_A Glycine N-methyltransfe 99.6 3.4E-14 1.2E-18 109.7 12.4 118 6-130 44-175 (293)
136 2xvm_A Tellurite resistance pr 99.6 4.3E-14 1.5E-18 102.8 12.2 107 13-131 26-137 (199)
137 3tma_A Methyltransferase; thum 99.6 2.1E-14 7.1E-19 114.2 11.3 119 3-129 187-316 (354)
138 1g8a_A Fibrillarin-like PRE-rR 99.6 8.2E-15 2.8E-19 109.3 8.4 106 17-129 71-177 (227)
139 3uwp_A Histone-lysine N-methyl 99.6 6.5E-14 2.2E-18 112.2 13.7 113 16-135 170-293 (438)
140 2ex4_A Adrenal gland protein A 99.6 6.1E-15 2.1E-19 111.0 7.3 116 7-132 63-187 (241)
141 2dul_A N(2),N(2)-dimethylguano 99.6 9.2E-14 3.1E-18 111.3 14.3 106 16-130 44-164 (378)
142 3dmg_A Probable ribosomal RNA 99.5 2.1E-14 7E-19 115.2 10.2 114 4-129 213-339 (381)
143 1fbn_A MJ fibrillarin homologu 99.5 6.7E-15 2.3E-19 110.2 6.9 105 17-129 72-177 (230)
144 1wzn_A SAM-dependent methyltra 99.5 1E-13 3.5E-18 104.7 13.5 109 8-129 27-144 (252)
145 2kw5_A SLR1183 protein; struct 99.5 3.2E-14 1.1E-18 104.0 10.0 111 11-133 21-134 (202)
146 3h2b_A SAM-dependent methyltra 99.5 1.4E-13 4.7E-18 100.7 13.4 109 7-132 30-143 (203)
147 2qfm_A Spermine synthase; sper 99.5 5.7E-14 1.9E-18 110.9 12.0 108 18-130 187-314 (364)
148 1r18_A Protein-L-isoaspartate( 99.5 5.1E-15 1.7E-19 110.5 5.6 113 7-129 71-193 (227)
149 3bkx_A SAM-dependent methyltra 99.5 4.6E-14 1.6E-18 108.0 11.1 112 17-133 41-162 (275)
150 1vbf_A 231AA long hypothetical 99.5 2.4E-14 8.1E-19 106.9 9.2 110 5-130 56-165 (231)
151 3dli_A Methyltransferase; PSI- 99.5 2.1E-14 7.3E-19 107.9 8.5 99 17-132 39-142 (240)
152 4fsd_A Arsenic methyltransfera 99.5 1.4E-14 4.6E-19 116.4 7.8 116 17-133 81-206 (383)
153 3q7e_A Protein arginine N-meth 99.5 3.7E-14 1.3E-18 112.6 10.2 104 16-129 63-172 (349)
154 3r0q_C Probable protein argini 99.5 5.6E-14 1.9E-18 112.6 11.1 106 16-132 60-171 (376)
155 1y8c_A S-adenosylmethionine-de 99.5 3.7E-14 1.3E-18 106.4 9.4 110 7-129 23-141 (246)
156 2ipx_A RRNA 2'-O-methyltransfe 99.5 3.1E-14 1.1E-18 106.6 9.0 104 17-129 75-181 (233)
157 3hnr_A Probable methyltransfer 99.5 1.5E-13 5E-18 101.7 12.5 109 8-133 35-148 (220)
158 4hg2_A Methyltransferase type 99.5 1.9E-14 6.5E-19 109.7 7.7 105 9-130 28-135 (257)
159 3axs_A Probable N(2),N(2)-dime 99.5 5.3E-14 1.8E-18 112.9 10.6 106 18-130 51-158 (392)
160 2fyt_A Protein arginine N-meth 99.5 5.1E-14 1.7E-18 111.4 10.4 104 15-128 60-169 (340)
161 2cmg_A Spermidine synthase; tr 99.5 4.6E-15 1.6E-19 113.4 4.1 97 18-129 71-170 (262)
162 2p8j_A S-adenosylmethionine-de 99.5 2.9E-14 9.9E-19 104.7 8.3 117 5-132 9-130 (209)
163 3gwz_A MMCR; methyltransferase 99.5 3.3E-13 1.1E-17 107.8 15.0 107 18-135 201-312 (369)
164 3e8s_A Putative SAM dependent 99.5 1.2E-13 4.3E-18 102.2 11.7 105 15-132 48-154 (227)
165 3ou2_A SAM-dependent methyltra 99.5 3.5E-14 1.2E-18 104.7 8.6 109 8-132 35-148 (218)
166 1ve3_A Hypothetical protein PH 99.5 5.3E-14 1.8E-18 104.5 9.5 111 10-132 28-144 (227)
167 1g6q_1 HnRNP arginine N-methyl 99.5 1.2E-13 4E-18 108.8 11.8 109 10-128 29-143 (328)
168 3i53_A O-methyltransferase; CO 99.5 1.8E-13 6E-18 107.8 12.8 106 19-135 169-279 (332)
169 2r3s_A Uncharacterized protein 99.5 5.4E-13 1.8E-17 104.9 15.5 107 18-134 164-275 (335)
170 3mcz_A O-methyltransferase; ad 99.5 9.1E-14 3.1E-18 110.2 10.6 110 18-135 177-292 (352)
171 2yx1_A Hypothetical protein MJ 99.5 1.1E-13 3.9E-18 109.2 11.1 100 18-132 194-293 (336)
172 1o9g_A RRNA methyltransferase; 99.5 9.6E-15 3.3E-19 110.6 4.7 120 9-131 38-215 (250)
173 3ujc_A Phosphoethanolamine N-m 99.5 9.5E-15 3.3E-19 110.9 4.5 104 17-132 53-161 (266)
174 3i9f_A Putative type 11 methyl 99.5 7.5E-14 2.6E-18 99.4 8.9 100 16-134 14-116 (170)
175 3g5l_A Putative S-adenosylmeth 99.5 2.7E-14 9.1E-19 108.1 6.8 99 18-129 43-144 (253)
176 1ri5_A MRNA capping enzyme; me 99.5 1.2E-13 4.2E-18 106.5 10.7 105 18-130 63-174 (298)
177 3pfg_A N-methyltransferase; N, 99.5 8.9E-14 3E-18 105.8 9.7 106 9-131 39-152 (263)
178 2y1w_A Histone-arginine methyl 99.5 1.8E-13 6.1E-18 108.6 11.7 103 16-129 47-154 (348)
179 4hc4_A Protein arginine N-meth 99.5 2.1E-13 7.1E-18 108.9 11.8 104 16-130 80-189 (376)
180 2b9e_A NOL1/NOP2/SUN domain fa 99.5 2.4E-13 8.2E-18 106.1 11.8 119 8-132 91-236 (309)
181 2ip2_A Probable phenazine-spec 99.5 3.9E-13 1.3E-17 105.8 12.9 103 21-134 169-276 (334)
182 2yqz_A Hypothetical protein TT 99.5 9.8E-14 3.3E-18 105.2 9.1 101 17-129 37-140 (263)
183 2p35_A Trans-aconitate 2-methy 99.5 4.2E-14 1.4E-18 107.1 7.0 99 17-130 31-132 (259)
184 3g2m_A PCZA361.24; SAM-depende 99.5 6.4E-14 2.2E-18 108.6 8.1 104 19-133 82-193 (299)
185 2vdw_A Vaccinia virus capping 99.5 2.3E-13 7.8E-18 106.0 11.2 107 19-131 48-170 (302)
186 2h00_A Methyltransferase 10 do 99.5 2.1E-14 7.2E-19 108.9 5.1 97 5-104 46-148 (254)
187 3d2l_A SAM-dependent methyltra 99.5 3.1E-13 1.1E-17 101.3 11.3 107 9-129 22-136 (243)
188 3m33_A Uncharacterized protein 99.5 3.8E-14 1.3E-18 105.7 6.1 93 17-127 46-139 (226)
189 3sm3_A SAM-dependent methyltra 99.5 7.3E-14 2.5E-18 104.1 7.6 105 17-131 28-142 (235)
190 1x19_A CRTF-related protein; m 99.5 6E-13 2.1E-17 105.8 13.1 106 17-133 188-298 (359)
191 1xtp_A LMAJ004091AAA; SGPP, st 99.5 7.7E-14 2.6E-18 105.4 7.5 103 17-131 91-198 (254)
192 3e23_A Uncharacterized protein 99.5 1.4E-13 4.8E-18 101.4 8.3 97 17-131 41-142 (211)
193 3q87_B N6 adenine specific DNA 99.5 6.2E-13 2.1E-17 95.0 11.5 103 4-130 7-123 (170)
194 3p2e_A 16S rRNA methylase; met 99.5 6.7E-14 2.3E-18 104.6 6.6 103 18-128 23-137 (225)
195 3bkw_A MLL3908 protein, S-aden 99.5 8.2E-14 2.8E-18 104.5 7.1 108 10-130 34-144 (243)
196 3ccf_A Cyclopropane-fatty-acyl 99.5 1.7E-13 5.7E-18 105.3 8.9 100 15-131 53-155 (279)
197 2aot_A HMT, histamine N-methyl 99.5 9.9E-13 3.4E-17 101.7 13.1 109 19-129 52-171 (292)
198 1qzz_A RDMB, aclacinomycin-10- 99.5 1.6E-13 5.3E-18 109.6 8.4 103 18-131 181-288 (374)
199 3ege_A Putative methyltransfer 99.5 5.3E-14 1.8E-18 107.1 5.4 109 5-131 20-131 (261)
200 2qm3_A Predicted methyltransfe 99.5 3.1E-13 1.1E-17 108.2 10.0 103 19-129 172-277 (373)
201 1tw3_A COMT, carminomycin 4-O- 99.5 2.3E-13 7.7E-18 108.2 9.2 104 18-132 182-290 (360)
202 3l8d_A Methyltransferase; stru 99.4 2.1E-13 7.2E-18 102.2 8.2 101 17-131 51-154 (242)
203 2pjd_A Ribosomal RNA small sub 99.4 2.1E-13 7.3E-18 107.9 8.3 100 18-129 195-302 (343)
204 3tm4_A TRNA (guanine N2-)-meth 99.4 5.5E-13 1.9E-17 106.7 10.7 115 4-128 203-328 (373)
205 3ggd_A SAM-dependent methyltra 99.4 3.6E-13 1.2E-17 101.4 8.9 105 17-132 54-165 (245)
206 3bt7_A TRNA (uracil-5-)-methyl 99.4 1.6E-12 5.6E-17 103.8 13.0 122 2-130 193-326 (369)
207 3tos_A CALS11; methyltransfera 99.4 7.5E-12 2.6E-16 94.7 15.8 149 18-184 68-254 (257)
208 3mq2_A 16S rRNA methyltransfer 99.4 2.5E-13 8.6E-18 100.5 7.5 104 16-129 24-139 (218)
209 3bgv_A MRNA CAP guanine-N7 met 99.4 7.2E-13 2.5E-17 103.4 10.4 107 19-130 34-155 (313)
210 2jjq_A Uncharacterized RNA met 99.4 1.2E-12 4E-17 106.4 12.0 112 3-129 273-386 (425)
211 2qe6_A Uncharacterized protein 99.4 2.9E-12 1E-16 98.4 13.6 110 19-133 77-199 (274)
212 2i62_A Nicotinamide N-methyltr 99.4 1.4E-13 4.7E-18 104.5 6.1 110 18-132 55-200 (265)
213 1ej0_A FTSJ; methyltransferase 99.4 3.9E-13 1.3E-17 95.5 8.2 99 17-131 20-137 (180)
214 3bxo_A N,N-dimethyltransferase 99.4 8.3E-13 2.8E-17 98.7 10.2 99 18-133 39-144 (239)
215 3iv6_A Putative Zn-dependent a 99.4 2.2E-13 7.7E-18 103.7 7.2 102 15-129 41-147 (261)
216 3b3j_A Histone-arginine methyl 99.4 7.4E-13 2.5E-17 109.1 10.5 101 17-128 156-261 (480)
217 3o4f_A Spermidine synthase; am 99.4 7E-13 2.4E-17 102.1 9.5 107 16-129 80-197 (294)
218 3bzb_A Uncharacterized protein 99.4 3.5E-12 1.2E-16 98.3 13.0 104 18-128 78-203 (281)
219 3cgg_A SAM-dependent methyltra 99.4 8.9E-13 3E-17 95.3 8.9 104 9-130 38-147 (195)
220 2gs9_A Hypothetical protein TT 99.4 2.1E-13 7E-18 100.4 5.5 96 19-132 36-134 (211)
221 1wy7_A Hypothetical protein PH 99.4 7.3E-12 2.5E-16 91.8 13.7 109 4-128 31-147 (207)
222 2pxx_A Uncharacterized protein 99.4 1.8E-13 6.1E-18 100.6 4.7 102 18-131 41-160 (215)
223 1p91_A Ribosomal RNA large sub 99.4 1.6E-12 5.5E-17 99.1 8.5 95 18-130 84-178 (269)
224 1ne2_A Hypothetical protein TA 99.4 6.7E-12 2.3E-16 91.6 11.3 91 19-129 51-146 (200)
225 2avn_A Ubiquinone/menaquinone 99.4 8.9E-13 3E-17 100.2 6.8 95 19-130 54-152 (260)
226 4a6d_A Hydroxyindole O-methylt 99.4 1.1E-11 3.9E-16 98.3 13.4 106 17-134 177-287 (353)
227 2a14_A Indolethylamine N-methy 99.4 1.9E-13 6.6E-18 104.2 2.8 110 18-132 54-199 (263)
228 1uwv_A 23S rRNA (uracil-5-)-me 99.4 4.4E-12 1.5E-16 103.4 10.9 115 7-129 271-388 (433)
229 2qy6_A UPF0209 protein YFCK; s 99.3 3.9E-12 1.3E-16 96.7 9.4 108 19-128 60-211 (257)
230 1zq9_A Probable dimethyladenos 99.3 5.9E-12 2E-16 97.2 10.1 92 4-107 13-104 (285)
231 2g72_A Phenylethanolamine N-me 99.3 1.8E-12 6.1E-17 100.0 7.0 110 19-131 71-216 (289)
232 2plw_A Ribosomal RNA methyltra 99.3 5.2E-12 1.8E-16 92.1 8.9 99 18-129 21-153 (201)
233 4e2x_A TCAB9; kijanose, tetron 99.3 1.6E-12 5.4E-17 105.3 6.6 100 18-130 106-208 (416)
234 3c6k_A Spermine synthase; sper 99.3 1.6E-11 5.4E-16 97.4 11.8 148 17-186 203-378 (381)
235 2f8l_A Hypothetical protein LM 99.3 3.2E-12 1.1E-16 101.2 7.6 115 5-129 112-255 (344)
236 3dou_A Ribosomal RNA large sub 99.3 9.4E-12 3.2E-16 90.6 9.2 105 9-129 12-138 (191)
237 1vlm_A SAM-dependent methyltra 99.3 3.2E-12 1.1E-16 94.7 6.7 103 8-132 36-141 (219)
238 3opn_A Putative hemolysin; str 99.3 7.1E-13 2.4E-17 99.5 3.1 98 19-129 37-136 (232)
239 3hp7_A Hemolysin, putative; st 99.3 7.3E-13 2.5E-17 102.2 3.0 99 19-129 85-184 (291)
240 2r6z_A UPF0341 protein in RSP 99.3 3.1E-12 1.1E-16 97.4 5.7 91 8-104 72-169 (258)
241 2nyu_A Putative ribosomal RNA 99.3 4.1E-11 1.4E-15 86.9 11.2 100 18-130 21-145 (196)
242 3lcv_B Sisomicin-gentamicin re 99.3 1.4E-11 4.9E-16 92.9 8.9 145 18-186 131-281 (281)
243 3cc8_A Putative methyltransfer 99.3 3.7E-12 1.3E-16 94.4 5.4 97 18-130 31-130 (230)
244 3reo_A (ISO)eugenol O-methyltr 99.3 1E-11 3.4E-16 99.2 8.1 99 18-135 202-305 (368)
245 4fzv_A Putative methyltransfer 99.3 1.5E-10 5.2E-15 91.8 14.8 119 8-133 137-287 (359)
246 3lst_A CALO1 methyltransferase 99.3 4E-12 1.4E-16 100.7 5.6 105 17-135 182-291 (348)
247 3giw_A Protein of unknown func 99.3 2.7E-11 9.3E-16 92.5 9.7 121 11-133 70-203 (277)
248 2h1r_A Dimethyladenosine trans 99.3 2.2E-11 7.5E-16 94.6 9.2 91 4-107 27-117 (299)
249 3p9c_A Caffeic acid O-methyltr 99.2 4.8E-11 1.6E-15 95.1 10.3 98 18-134 200-302 (364)
250 1af7_A Chemotaxis receptor met 99.2 1.2E-11 4.1E-16 94.9 6.1 105 19-129 105-251 (274)
251 3k0b_A Predicted N6-adenine-sp 99.2 2.2E-11 7.5E-16 98.0 7.6 117 4-128 186-348 (393)
252 3gru_A Dimethyladenosine trans 99.2 1.3E-10 4.5E-15 90.0 11.3 100 5-117 36-135 (295)
253 2zfu_A Nucleomethylin, cerebra 99.2 1.2E-11 4.1E-16 91.1 4.9 95 9-132 57-153 (215)
254 3ldg_A Putative uncharacterize 99.2 5.9E-11 2E-15 95.2 9.1 117 4-128 179-341 (384)
255 3ll7_A Putative methyltransfer 99.2 3E-11 1E-15 97.3 7.1 77 19-104 93-171 (410)
256 3ldu_A Putative methylase; str 99.2 2.9E-11 1E-15 97.0 7.0 116 5-128 181-342 (385)
257 2ih2_A Modification methylase 99.2 2.7E-11 9.1E-16 98.0 6.3 106 5-128 25-162 (421)
258 1m6y_A S-adenosyl-methyltransf 99.2 1.9E-10 6.5E-15 89.3 10.7 86 17-107 24-109 (301)
259 2okc_A Type I restriction enzy 99.2 2.4E-11 8.4E-16 99.3 5.6 117 4-128 156-305 (445)
260 3frh_A 16S rRNA methylase; met 99.2 5.9E-10 2E-14 83.3 12.3 145 15-186 101-251 (253)
261 4azs_A Methyltransferase WBDD; 99.2 3E-10 1E-14 95.5 12.1 102 17-127 64-170 (569)
262 1fp1_D Isoliquiritigenin 2'-O- 99.1 3.5E-11 1.2E-15 96.1 5.3 97 18-133 208-309 (372)
263 2oyr_A UPF0341 protein YHIQ; a 99.1 1.8E-11 6.1E-16 93.0 3.3 103 11-122 78-192 (258)
264 3tqs_A Ribosomal RNA small sub 99.1 2.5E-10 8.5E-15 86.7 8.8 91 4-105 14-105 (255)
265 1fp2_A Isoflavone O-methyltran 99.1 1E-10 3.5E-15 92.7 6.9 98 17-133 186-291 (352)
266 3fut_A Dimethyladenosine trans 99.1 8.6E-10 2.9E-14 84.4 11.3 110 5-129 33-144 (271)
267 2ar0_A M.ecoki, type I restric 99.1 4.4E-10 1.5E-14 93.9 9.0 119 4-128 154-310 (541)
268 1zg3_A Isoflavanone 4'-O-methy 99.0 3.3E-10 1.1E-14 89.9 6.8 98 17-133 191-296 (358)
269 2oxt_A Nucleoside-2'-O-methylt 99.0 3.5E-11 1.2E-15 91.9 0.5 98 18-129 73-184 (265)
270 2xyq_A Putative 2'-O-methyl tr 99.0 4.3E-10 1.5E-14 86.8 6.5 90 17-130 61-171 (290)
271 2wa2_A Non-structural protein 99.0 5.1E-11 1.8E-15 91.5 1.3 98 18-129 81-192 (276)
272 2p41_A Type II methyltransfera 99.0 2.4E-10 8.1E-15 89.0 4.0 96 18-129 81-190 (305)
273 1qam_A ERMC' methyltransferase 99.0 1.7E-09 5.7E-14 81.6 8.4 62 16-83 27-88 (244)
274 3khk_A Type I restriction-modi 98.9 7.8E-10 2.7E-14 92.3 5.5 118 4-128 230-393 (544)
275 4gqb_A Protein arginine N-meth 98.9 9.6E-09 3.3E-13 86.7 10.0 100 20-128 358-465 (637)
276 3uzu_A Ribosomal RNA small sub 98.9 3.8E-09 1.3E-13 81.2 7.0 74 5-83 28-102 (279)
277 3v97_A Ribosomal RNA large sub 98.9 3.6E-09 1.2E-13 90.9 7.2 120 4-128 175-345 (703)
278 1yub_A Ermam, rRNA methyltrans 98.8 1.2E-10 4.2E-15 87.8 -2.3 102 14-128 24-143 (245)
279 3ftd_A Dimethyladenosine trans 98.8 1.3E-08 4.3E-13 77.0 8.4 110 6-129 18-130 (249)
280 3lkd_A Type I restriction-modi 98.8 1.4E-08 4.8E-13 84.7 9.2 121 3-128 201-356 (542)
281 1qyr_A KSGA, high level kasuga 98.8 1.8E-08 6.2E-13 76.3 8.9 105 4-117 6-111 (252)
282 3ua3_A Protein arginine N-meth 98.8 1.2E-08 4.1E-13 86.5 8.0 106 20-128 410-532 (745)
283 2oo3_A Protein involved in cat 98.7 1.4E-08 4.9E-13 77.4 6.4 112 7-128 80-196 (283)
284 3s1s_A Restriction endonucleas 98.7 7.9E-08 2.7E-12 82.7 11.0 120 3-128 299-463 (878)
285 2ld4_A Anamorsin; methyltransf 98.7 5.1E-09 1.7E-13 74.6 2.8 89 17-131 10-102 (176)
286 1wg8_A Predicted S-adenosylmet 98.6 1.5E-07 5.2E-12 71.7 9.4 91 9-110 13-103 (285)
287 2k4m_A TR8_protein, UPF0146 pr 98.5 7.8E-07 2.7E-11 61.1 8.0 80 18-121 34-114 (153)
288 3tka_A Ribosomal RNA small sub 98.4 1.6E-06 5.4E-11 67.7 9.1 86 17-108 55-140 (347)
289 3ufb_A Type I restriction-modi 98.2 3.5E-06 1.2E-10 70.2 7.6 121 3-128 201-360 (530)
290 3evf_A RNA-directed RNA polyme 98.1 1.5E-06 5.3E-11 65.8 3.8 105 17-133 72-186 (277)
291 4auk_A Ribosomal RNA large sub 98.1 1.9E-05 6.5E-10 62.5 9.4 72 17-106 209-280 (375)
292 2zig_A TTHA0409, putative modi 98.1 1.8E-05 6.2E-10 61.1 8.8 57 9-68 223-281 (297)
293 3gcz_A Polyprotein; flavivirus 98.1 3.2E-06 1.1E-10 64.2 4.3 101 17-129 88-200 (282)
294 3pvc_A TRNA 5-methylaminomethy 98.0 8.9E-06 3E-10 69.8 6.4 109 19-129 58-210 (689)
295 3p8z_A Mtase, non-structural p 97.9 0.00013 4.5E-09 54.0 10.8 100 17-129 76-185 (267)
296 1i4w_A Mitochondrial replicati 97.9 2.4E-05 8.1E-10 61.8 7.2 59 20-83 59-117 (353)
297 3vyw_A MNMC2; tRNA wobble urid 97.9 0.00015 5.1E-09 56.0 10.9 106 18-128 95-224 (308)
298 2px2_A Genome polyprotein [con 97.9 1.2E-05 4.3E-10 60.2 4.2 96 17-129 71-182 (269)
299 3eld_A Methyltransferase; flav 97.9 1.4E-05 4.8E-10 61.1 4.5 101 17-129 79-190 (300)
300 3lkz_A Non-structural protein 97.7 0.00021 7.2E-09 54.6 9.0 101 17-129 92-203 (321)
301 1g60_A Adenine-specific methyl 97.6 0.00017 5.7E-09 54.6 7.1 57 9-68 200-258 (260)
302 2efj_A 3,7-dimethylxanthine me 97.6 0.0001 3.5E-09 58.8 5.5 78 20-104 53-157 (384)
303 2py6_A Methyltransferase FKBM; 97.5 0.00031 1.1E-08 56.6 8.2 49 18-66 225-274 (409)
304 3ps9_A TRNA 5-methylaminomethy 97.5 0.00079 2.7E-08 57.5 10.5 108 20-129 67-218 (676)
305 1m6e_X S-adenosyl-L-methionnin 97.5 1.6E-05 5.4E-10 63.0 -0.3 107 20-130 52-209 (359)
306 3b5i_A S-adenosyl-L-methionine 97.4 9.8E-05 3.4E-09 58.8 4.0 39 20-58 53-105 (374)
307 1f8f_A Benzyl alcohol dehydrog 97.4 0.00065 2.2E-08 53.8 8.1 103 16-131 187-290 (371)
308 1pqw_A Polyketide synthase; ro 97.4 0.00038 1.3E-08 50.0 6.1 100 17-130 36-137 (198)
309 3s2e_A Zinc-containing alcohol 97.3 0.001 3.5E-08 52.0 8.9 101 16-131 163-264 (340)
310 2dph_A Formaldehyde dismutase; 97.2 0.0011 3.8E-08 53.0 8.3 106 15-130 181-299 (398)
311 3r24_A NSP16, 2'-O-methyl tran 97.2 0.0008 2.7E-08 51.5 6.7 88 19-129 109-216 (344)
312 3fpc_A NADP-dependent alcohol 97.2 0.0018 6.2E-08 50.8 9.1 105 15-131 162-267 (352)
313 1pl8_A Human sorbitol dehydrog 97.2 0.003 1E-07 49.7 10.3 103 15-130 167-273 (356)
314 3iht_A S-adenosyl-L-methionine 97.2 0.015 5E-07 40.2 12.0 113 9-132 28-149 (174)
315 4eez_A Alcohol dehydrogenase 1 97.1 0.0079 2.7E-07 46.9 11.8 104 16-131 160-264 (348)
316 4a2c_A Galactitol-1-phosphate 97.1 0.0062 2.1E-07 47.5 10.9 106 15-132 156-262 (346)
317 3jv7_A ADH-A; dehydrogenase, n 97.1 0.0029 9.8E-08 49.5 9.0 103 16-131 168-271 (345)
318 4ej6_A Putative zinc-binding d 97.1 0.0021 7.3E-08 50.9 8.0 108 14-131 177-285 (370)
319 1e3j_A NADP(H)-dependent ketos 97.0 0.0087 3E-07 46.9 11.2 106 15-130 164-271 (352)
320 2uyo_A Hypothetical protein ML 97.0 0.026 9E-07 43.6 13.6 111 19-132 102-220 (310)
321 2c0c_A Zinc binding alcohol de 97.0 0.0039 1.3E-07 49.2 9.0 101 15-130 159-261 (362)
322 1kol_A Formaldehyde dehydrogen 97.0 0.0063 2.1E-07 48.5 10.0 106 16-131 182-301 (398)
323 3m6i_A L-arabinitol 4-dehydrog 96.9 0.011 3.8E-07 46.5 11.2 106 15-130 175-283 (363)
324 4b7c_A Probable oxidoreductase 96.9 0.0026 8.7E-08 49.6 7.1 102 15-130 145-248 (336)
325 1uuf_A YAHK, zinc-type alcohol 96.9 0.012 4.3E-07 46.4 11.2 97 16-130 191-288 (369)
326 2vz8_A Fatty acid synthase; tr 96.9 0.00041 1.4E-08 67.1 2.8 112 10-131 1229-1349(2512)
327 3uog_A Alcohol dehydrogenase; 96.9 0.0018 6.2E-08 51.1 6.1 102 16-132 186-289 (363)
328 3ip1_A Alcohol dehydrogenase, 96.9 0.0069 2.4E-07 48.5 9.5 106 17-131 211-319 (404)
329 1cdo_A Alcohol dehydrogenase; 96.9 0.0074 2.5E-07 47.7 9.6 100 16-131 189-295 (374)
330 3qwb_A Probable quinone oxidor 96.8 0.002 6.7E-08 50.2 6.0 100 17-130 146-247 (334)
331 4eye_A Probable oxidoreductase 96.8 0.0035 1.2E-07 49.0 7.4 99 17-130 157-257 (342)
332 1rjd_A PPM1P, carboxy methyl t 96.8 0.024 8.3E-07 44.3 12.1 117 10-129 88-232 (334)
333 1p0f_A NADP-dependent alcohol 96.8 0.0057 2E-07 48.3 8.7 99 16-130 188-293 (373)
334 1e3i_A Alcohol dehydrogenase, 96.8 0.0077 2.6E-07 47.6 9.3 102 17-131 193-298 (376)
335 3gms_A Putative NADPH:quinone 96.8 0.004 1.4E-07 48.6 7.4 102 16-131 141-244 (340)
336 3jyn_A Quinone oxidoreductase; 96.8 0.0029 1E-07 49.1 6.5 100 17-130 138-239 (325)
337 1wly_A CAAR, 2-haloacrylate re 96.8 0.0033 1.1E-07 48.9 6.7 100 17-130 143-244 (333)
338 1v3u_A Leukotriene B4 12- hydr 96.8 0.0042 1.4E-07 48.3 7.3 100 16-130 142-244 (333)
339 2fzw_A Alcohol dehydrogenase c 96.7 0.0075 2.6E-07 47.6 8.8 100 16-131 187-293 (373)
340 2hcy_A Alcohol dehydrogenase 1 96.7 0.012 4.1E-07 46.0 9.8 102 16-131 166-270 (347)
341 2jhf_A Alcohol dehydrogenase E 96.7 0.0078 2.7E-07 47.6 8.7 100 16-131 188-294 (374)
342 3uko_A Alcohol dehydrogenase c 96.7 0.0049 1.7E-07 48.8 7.6 103 16-131 190-296 (378)
343 1qor_A Quinone oxidoreductase; 96.7 0.0025 8.5E-08 49.4 5.5 100 17-130 138-239 (327)
344 1g55_A DNA cytosine methyltran 96.7 0.0017 5.9E-08 51.0 4.4 75 20-105 2-77 (343)
345 2h6e_A ADH-4, D-arabinose 1-de 96.6 0.026 8.8E-07 44.0 11.2 100 16-130 168-269 (344)
346 1rjw_A ADH-HT, alcohol dehydro 96.6 0.013 4.6E-07 45.6 9.2 100 16-130 161-261 (339)
347 3two_A Mannitol dehydrogenase; 96.5 0.017 5.8E-07 45.2 9.2 93 16-131 173-266 (348)
348 1vj0_A Alcohol dehydrogenase, 96.5 0.011 3.6E-07 47.0 8.1 103 17-131 193-299 (380)
349 4dup_A Quinone oxidoreductase; 96.5 0.0059 2E-07 47.9 6.4 101 16-131 164-266 (353)
350 2eih_A Alcohol dehydrogenase; 96.5 0.0037 1.3E-07 48.9 5.2 100 17-130 164-265 (343)
351 3g7u_A Cytosine-specific methy 96.4 0.01 3.6E-07 47.2 7.7 103 21-132 3-121 (376)
352 4dvj_A Putative zinc-dependent 96.4 0.0063 2.2E-07 48.0 6.4 97 19-129 171-269 (363)
353 2d8a_A PH0655, probable L-thre 96.4 0.012 4E-07 46.1 7.8 99 19-130 167-267 (348)
354 1jvb_A NAD(H)-dependent alcoho 96.4 0.014 4.7E-07 45.6 8.2 104 15-130 166-271 (347)
355 1iz0_A Quinone oxidoreductase; 96.4 0.02 7E-07 43.7 8.9 92 17-129 123-217 (302)
356 2j3h_A NADP-dependent oxidored 96.4 0.0058 2E-07 47.7 5.8 100 16-129 152-254 (345)
357 1g60_A Adenine-specific methyl 96.3 0.0049 1.7E-07 46.4 5.0 53 72-129 4-73 (260)
358 1yb5_A Quinone oxidoreductase; 96.3 0.0082 2.8E-07 47.1 6.3 101 16-130 167-269 (351)
359 1boo_A Protein (N-4 cytosine-s 96.2 0.0072 2.5E-07 47.0 5.5 54 71-129 13-83 (323)
360 1boo_A Protein (N-4 cytosine-s 96.2 0.0071 2.4E-07 47.1 5.3 58 9-69 240-299 (323)
361 2zb4_A Prostaglandin reductase 96.1 0.021 7.2E-07 44.7 8.0 101 16-130 155-260 (357)
362 1eg2_A Modification methylase 96.1 0.011 3.6E-07 46.1 6.2 54 71-129 37-105 (319)
363 2b5w_A Glucose dehydrogenase; 96.1 0.037 1.3E-06 43.4 9.3 99 15-130 162-273 (357)
364 2j8z_A Quinone oxidoreductase; 96.1 0.023 7.8E-07 44.6 7.9 100 17-130 160-261 (354)
365 3gaz_A Alcohol dehydrogenase s 96.1 0.037 1.3E-06 43.2 9.0 97 16-129 147-245 (343)
366 2c7p_A Modification methylase 96.1 0.012 4E-07 45.9 6.1 97 19-132 10-122 (327)
367 1eg2_A Modification methylase 96.1 0.012 4.2E-07 45.7 6.1 57 9-68 230-291 (319)
368 1piw_A Hypothetical zinc-type 96.0 0.022 7.6E-07 44.7 7.5 99 16-130 176-276 (360)
369 3fbg_A Putative arginate lyase 96.0 0.034 1.2E-06 43.4 8.5 96 19-129 150-247 (346)
370 2zig_A TTHA0409, putative modi 96.0 0.011 3.8E-07 45.3 5.5 54 71-129 20-96 (297)
371 3gqv_A Enoyl reductase; medium 95.7 0.15 5.1E-06 40.1 11.1 98 18-130 163-263 (371)
372 3fwz_A Inner membrane protein 95.6 0.056 1.9E-06 36.4 7.2 93 21-128 8-103 (140)
373 1yqd_A Sinapyl alcohol dehydro 95.5 0.1 3.4E-06 41.1 9.6 95 19-130 187-282 (366)
374 2dq4_A L-threonine 3-dehydroge 95.4 0.025 8.7E-07 44.0 5.7 94 19-130 164-262 (343)
375 2qrv_A DNA (cytosine-5)-methyl 95.3 0.051 1.7E-06 41.7 7.0 75 18-103 14-90 (295)
376 2cf5_A Atccad5, CAD, cinnamyl 95.1 0.076 2.6E-06 41.6 7.7 97 17-130 177-275 (357)
377 2vhw_A Alanine dehydrogenase; 95.1 0.089 3E-06 41.7 8.1 99 18-130 166-268 (377)
378 1xa0_A Putative NADPH dependen 95.1 0.043 1.5E-06 42.4 6.1 91 22-130 152-246 (328)
379 3pi7_A NADH oxidoreductase; gr 95.1 0.22 7.5E-06 38.7 10.2 96 21-130 166-263 (349)
380 3krt_A Crotonyl COA reductase; 95.0 0.068 2.3E-06 43.4 7.3 101 16-130 225-344 (456)
381 3qv2_A 5-cytosine DNA methyltr 95.0 0.036 1.2E-06 43.2 5.3 74 19-104 9-84 (327)
382 4a27_A Synaptic vesicle membra 95.0 0.056 1.9E-06 42.2 6.5 98 16-130 139-238 (349)
383 1gu7_A Enoyl-[acyl-carrier-pro 95.0 0.1 3.5E-06 40.8 8.0 106 17-130 164-275 (364)
384 1pjc_A Protein (L-alanine dehy 94.9 0.13 4.3E-06 40.5 8.4 98 18-129 165-266 (361)
385 4h0n_A DNMT2; SAH binding, tra 94.8 0.043 1.5E-06 42.9 5.3 73 20-103 3-76 (333)
386 2eez_A Alanine dehydrogenase; 94.7 0.2 6.9E-06 39.5 9.0 99 18-130 164-266 (369)
387 1lss_A TRK system potassium up 94.7 0.38 1.3E-05 31.6 9.3 94 20-127 4-100 (140)
388 4f3n_A Uncharacterized ACR, CO 94.6 0.079 2.7E-06 42.8 6.5 63 4-66 118-188 (432)
389 4a0s_A Octenoyl-COA reductase/ 94.6 0.16 5.6E-06 40.9 8.5 100 16-130 217-336 (447)
390 2vn8_A Reticulon-4-interacting 94.4 0.18 6.3E-06 39.6 8.1 97 17-129 181-279 (375)
391 1id1_A Putative potassium chan 94.3 0.54 1.8E-05 31.8 9.5 97 20-128 3-103 (153)
392 3goh_A Alcohol dehydrogenase, 94.2 0.12 4E-06 39.7 6.5 89 16-129 139-228 (315)
393 2cdc_A Glucose dehydrogenase g 94.2 0.18 6.1E-06 39.6 7.6 94 20-131 181-279 (366)
394 4a7p_A UDP-glucose dehydrogena 94.1 0.66 2.2E-05 37.7 10.9 102 19-133 7-132 (446)
395 3me5_A Cytosine-specific methy 94.1 0.19 6.6E-06 41.2 7.8 58 21-84 89-147 (482)
396 3pid_A UDP-glucose 6-dehydroge 94.0 0.66 2.3E-05 37.5 10.8 104 16-135 32-158 (432)
397 3llv_A Exopolyphosphatase-rela 94.0 0.28 9.5E-06 32.7 7.4 93 20-128 6-101 (141)
398 3p2y_A Alanine dehydrogenase/p 94.0 0.15 5.2E-06 40.5 6.8 97 19-131 183-303 (381)
399 1h2b_A Alcohol dehydrogenase; 94.0 0.23 7.9E-06 38.8 7.9 99 15-130 182-285 (359)
400 3nx4_A Putative oxidoreductase 93.9 0.061 2.1E-06 41.4 4.5 91 22-130 149-241 (324)
401 4e21_A 6-phosphogluconate dehy 93.6 1.7 5.7E-05 34.2 12.2 92 19-128 21-113 (358)
402 1l7d_A Nicotinamide nucleotide 93.5 0.27 9.2E-06 39.0 7.6 42 19-62 171-213 (384)
403 1zkd_A DUF185; NESG, RPR58, st 93.4 0.13 4.3E-06 41.1 5.5 62 4-65 58-132 (387)
404 3l9w_A Glutathione-regulated p 93.3 0.21 7E-06 40.2 6.6 95 19-128 3-100 (413)
405 3tqh_A Quinone oxidoreductase; 93.1 0.45 1.5E-05 36.5 8.2 96 14-130 147-245 (321)
406 2aef_A Calcium-gated potassium 93.0 1.5 5.2E-05 31.8 10.6 94 19-128 8-103 (234)
407 3c85_A Putative glutathione-re 93.0 0.43 1.5E-05 33.3 7.3 95 20-128 39-137 (183)
408 3l4b_C TRKA K+ channel protien 93.0 0.58 2E-05 33.7 8.2 93 22-128 2-97 (218)
409 4dio_A NAD(P) transhydrogenase 92.9 0.33 1.1E-05 38.9 7.2 42 19-62 189-231 (405)
410 3ubt_Y Modification methylase 92.9 0.2 6.8E-06 38.6 5.9 96 21-132 1-112 (331)
411 4dcm_A Ribosomal RNA large sub 92.8 0.27 9.1E-06 39.0 6.6 95 19-129 38-135 (375)
412 3abi_A Putative uncharacterize 92.8 0.29 1E-05 38.4 6.8 70 19-105 15-86 (365)
413 3vtf_A UDP-glucose 6-dehydroge 92.6 0.63 2.2E-05 37.7 8.5 39 21-61 22-61 (444)
414 4ezb_A Uncharacterized conserv 92.5 2.8 9.6E-05 32.1 12.4 91 20-129 24-120 (317)
415 3ggo_A Prephenate dehydrogenas 92.5 0.29 9.8E-06 37.8 6.2 89 21-127 34-125 (314)
416 1jw9_B Molybdopterin biosynthe 92.3 1.3 4.5E-05 32.8 9.5 79 19-105 30-130 (249)
417 2y0c_A BCEC, UDP-glucose dehyd 92.2 1.4 4.8E-05 36.0 10.3 103 17-132 5-130 (478)
418 2g1u_A Hypothetical protein TM 92.2 0.43 1.5E-05 32.4 6.3 98 17-128 16-116 (155)
419 1lnq_A MTHK channels, potassiu 92.2 1.5 5.2E-05 33.7 10.1 93 20-128 115-209 (336)
420 1x13_A NAD(P) transhydrogenase 92.2 0.4 1.4E-05 38.3 6.8 41 19-61 171-212 (401)
421 3ic5_A Putative saccharopine d 92.0 1.4 4.9E-05 27.7 8.5 72 20-107 5-80 (118)
422 4eso_A Putative oxidoreductase 92.0 2.4 8.2E-05 31.2 10.7 106 18-129 6-137 (255)
423 3gt0_A Pyrroline-5-carboxylate 91.9 0.31 1E-05 36.0 5.6 87 21-127 3-94 (247)
424 3k31_A Enoyl-(acyl-carrier-pro 91.9 3.1 0.00011 31.3 11.6 83 19-104 29-116 (296)
425 1tt7_A YHFP; alcohol dehydroge 91.8 0.063 2.1E-06 41.5 1.8 93 22-130 153-247 (330)
426 3iup_A Putative NADPH:quinone 91.6 0.32 1.1E-05 38.4 5.8 76 18-103 169-247 (379)
427 2vz8_A Fatty acid synthase; tr 91.5 0.3 1E-05 47.8 6.3 104 16-129 1664-1769(2512)
428 3k96_A Glycerol-3-phosphate de 91.3 1.6 5.4E-05 34.2 9.4 96 20-128 29-131 (356)
429 4fgs_A Probable dehydrogenase 91.3 2.5 8.5E-05 31.9 10.1 134 18-165 27-189 (273)
430 1dlj_A UDP-glucose dehydrogena 91.0 2.9 0.0001 33.2 10.8 95 22-132 2-119 (402)
431 3pxx_A Carveol dehydrogenase; 91.0 3.7 0.00013 30.4 11.5 106 18-129 8-152 (287)
432 3tri_A Pyrroline-5-carboxylate 91.0 0.62 2.1E-05 35.2 6.5 88 20-127 3-95 (280)
433 3oig_A Enoyl-[acyl-carrier-pro 90.9 3.6 0.00012 30.2 12.3 104 19-129 6-146 (266)
434 3ce6_A Adenosylhomocysteinase; 90.7 0.96 3.3E-05 37.2 7.8 89 17-129 271-360 (494)
435 3gg2_A Sugar dehydrogenase, UD 90.6 3.4 0.00012 33.4 10.9 99 21-132 3-124 (450)
436 3iei_A Leucine carboxyl methyl 90.6 5 0.00017 31.2 13.0 120 9-129 79-229 (334)
437 3ioy_A Short-chain dehydrogena 90.3 2.9 0.0001 31.9 10.0 82 19-104 7-95 (319)
438 3h8v_A Ubiquitin-like modifier 90.3 2.1 7.2E-05 32.6 9.0 61 18-80 34-114 (292)
439 3ijr_A Oxidoreductase, short c 90.3 4.6 0.00016 30.3 10.9 105 19-129 46-181 (291)
440 1zud_1 Adenylyltransferase THI 90.1 3.4 0.00012 30.6 9.8 81 18-105 26-127 (251)
441 2g5c_A Prephenate dehydrogenas 90.0 0.58 2E-05 35.0 5.6 89 21-128 2-94 (281)
442 1bg6_A N-(1-D-carboxylethyl)-L 89.9 2 6.9E-05 33.1 8.8 98 20-129 4-108 (359)
443 3slk_A Polyketide synthase ext 89.6 0.44 1.5E-05 41.6 5.2 98 16-129 342-441 (795)
444 1zsy_A Mitochondrial 2-enoyl t 89.5 0.46 1.6E-05 37.0 4.9 103 16-129 164-269 (357)
445 3t8y_A CHEB, chemotaxis respon 89.4 3.1 0.0001 28.0 8.6 94 28-129 9-105 (164)
446 1x0v_A GPD-C, GPDH-C, glycerol 89.1 1.5 5.3E-05 33.8 7.6 95 21-128 9-122 (354)
447 4g65_A TRK system potassium up 89.0 1.9 6.5E-05 35.1 8.3 70 20-103 3-75 (461)
448 3t4x_A Oxidoreductase, short c 88.9 2.2 7.5E-05 31.6 8.1 82 19-104 9-93 (267)
449 1y8q_A Ubiquitin-like 1 activa 88.8 2.7 9.2E-05 32.8 8.8 89 18-114 34-143 (346)
450 1wma_A Carbonyl reductase [NAD 88.8 5.4 0.00018 29.1 10.4 83 19-104 3-90 (276)
451 3hwr_A 2-dehydropantoate 2-red 88.8 0.89 3E-05 34.9 5.9 96 18-128 17-118 (318)
452 2qyt_A 2-dehydropantoate 2-red 88.7 1.8 6.3E-05 32.7 7.7 34 95-128 82-115 (317)
453 3nzo_A UDP-N-acetylglucosamine 88.6 4.5 0.00015 31.9 10.1 85 16-105 31-121 (399)
454 4fs3_A Enoyl-[acyl-carrier-pro 88.5 5.9 0.0002 29.1 13.2 80 18-104 4-94 (256)
455 1xg5_A ARPG836; short chain de 88.3 6.2 0.00021 29.2 12.4 85 19-104 31-119 (279)
456 4ina_A Saccharopine dehydrogen 88.2 4.6 0.00016 32.1 9.9 89 21-116 2-96 (405)
457 4fn4_A Short chain dehydrogena 88.1 5.1 0.00018 29.7 9.6 81 18-104 5-92 (254)
458 3rui_A Ubiquitin-like modifier 88.0 7.2 0.00025 30.4 10.6 59 19-78 33-111 (340)
459 3ojo_A CAP5O; rossmann fold, c 88.0 1.3 4.4E-05 35.8 6.6 107 19-135 10-134 (431)
460 4g81_D Putative hexonate dehyd 88.0 6.7 0.00023 29.1 10.4 81 18-104 7-94 (255)
461 2o3j_A UDP-glucose 6-dehydroge 87.9 9.8 0.00033 31.0 12.6 100 21-133 10-138 (481)
462 1lld_A L-lactate dehydrogenase 87.8 4.4 0.00015 30.7 9.4 38 19-58 6-46 (319)
463 3d4o_A Dipicolinate synthase s 87.6 4.4 0.00015 30.6 9.1 89 18-128 153-242 (293)
464 4gwg_A 6-phosphogluconate dehy 87.6 6.3 0.00022 32.3 10.5 95 21-128 5-101 (484)
465 4g65_A TRK system potassium up 87.5 3.4 0.00012 33.5 8.9 85 7-104 221-308 (461)
466 4e12_A Diketoreductase; oxidor 87.1 6.6 0.00023 29.4 9.8 96 20-128 4-119 (283)
467 3ucx_A Short chain dehydrogena 87.0 7 0.00024 28.7 9.8 81 18-104 9-96 (264)
468 3grk_A Enoyl-(acyl-carrier-pro 86.9 8.1 0.00028 29.0 13.5 81 18-104 29-117 (293)
469 1y6j_A L-lactate dehydrogenase 86.9 3.5 0.00012 31.6 8.3 97 19-129 6-122 (318)
470 3pef_A 6-phosphogluconate dehy 86.7 8.1 0.00028 28.8 10.8 87 21-128 2-93 (287)
471 3r6d_A NAD-dependent epimerase 86.7 2 6.9E-05 30.5 6.5 93 21-128 6-105 (221)
472 3h7a_A Short chain dehydrogena 86.6 7.6 0.00026 28.3 10.3 83 18-104 5-91 (252)
473 2izz_A Pyrroline-5-carboxylate 86.5 2.2 7.6E-05 32.7 7.0 89 19-128 21-116 (322)
474 4gsl_A Ubiquitin-like modifier 86.2 8.3 0.00028 32.6 10.5 60 18-78 324-403 (615)
475 3b1f_A Putative prephenate deh 86.1 5.4 0.00018 29.8 8.9 89 20-127 6-98 (290)
476 3o38_A Short chain dehydrogena 86.0 5.7 0.00019 29.1 8.9 80 18-104 20-109 (266)
477 2cvz_A Dehydrogenase, 3-hydrox 86.0 5.5 0.00019 29.6 8.9 85 22-128 3-88 (289)
478 3ek2_A Enoyl-(acyl-carrier-pro 85.8 8.4 0.00029 28.1 11.3 82 17-104 11-100 (271)
479 3trk_A Nonstructural polyprote 85.7 1.2 4.1E-05 33.6 4.7 38 95-132 210-261 (324)
480 3lyl_A 3-oxoacyl-(acyl-carrier 85.6 8.2 0.00028 27.8 9.5 80 19-104 4-90 (247)
481 2gdz_A NAD+-dependent 15-hydro 85.6 8.8 0.0003 28.1 10.8 87 18-105 5-95 (267)
482 3sju_A Keto reductase; short-c 85.6 5.8 0.0002 29.5 8.8 82 17-104 21-109 (279)
483 2rir_A Dipicolinate synthase, 85.6 7.7 0.00026 29.3 9.6 89 18-128 155-244 (300)
484 3edm_A Short chain dehydrogena 85.4 8.9 0.00031 28.0 11.0 84 18-104 6-94 (259)
485 3to5_A CHEY homolog; alpha(5)b 85.4 2.2 7.5E-05 28.3 5.7 68 43-117 11-80 (134)
486 3q2i_A Dehydrogenase; rossmann 85.2 10 0.00034 29.3 10.3 91 19-128 12-104 (354)
487 1zcj_A Peroxisomal bifunctiona 85.1 14 0.00047 29.9 11.5 93 21-128 38-148 (463)
488 3lf2_A Short chain oxidoreduct 85.1 7.1 0.00024 28.7 9.0 82 19-104 7-95 (265)
489 3nyw_A Putative oxidoreductase 85.1 6 0.00021 28.9 8.6 83 18-104 5-95 (250)
490 2ixa_A Alpha-N-acetylgalactosa 85.0 6.5 0.00022 31.5 9.3 76 19-104 19-99 (444)
491 3qiv_A Short-chain dehydrogena 85.0 9 0.00031 27.7 10.5 83 19-104 8-94 (253)
492 3r3s_A Oxidoreductase; structu 85.0 10 0.00035 28.4 11.0 105 19-129 48-184 (294)
493 3swr_A DNA (cytosine-5)-methyl 84.9 5 0.00017 35.9 9.1 77 19-104 539-626 (1002)
494 2v6b_A L-LDH, L-lactate dehydr 84.9 6.6 0.00022 29.9 8.9 94 22-128 2-114 (304)
495 3i1j_A Oxidoreductase, short c 84.8 6 0.0002 28.6 8.4 82 18-104 12-102 (247)
496 2ew2_A 2-dehydropantoate 2-red 84.7 3.9 0.00013 30.7 7.6 94 21-128 4-106 (316)
497 3f1l_A Uncharacterized oxidore 84.7 6.3 0.00021 28.7 8.5 82 18-104 10-100 (252)
498 3hn2_A 2-dehydropantoate 2-red 84.7 1 3.5E-05 34.4 4.2 88 21-128 3-101 (312)
499 1zh8_A Oxidoreductase; TM0312, 84.7 5.9 0.0002 30.5 8.6 73 17-104 15-90 (340)
500 3svt_A Short-chain type dehydr 84.5 7.6 0.00026 28.8 9.0 86 18-104 9-99 (281)
No 1
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=100.00 E-value=3.4e-34 Score=217.49 Aligned_cols=180 Identities=38% Similarity=0.618 Sum_probs=160.4
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcch
Q 029803 1 MLLLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 80 (187)
Q Consensus 1 ~~~~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 80 (187)
|++++.+++++..++...++++|||||||+|+++++++..++++++|+++|+++++++.|+++++..++.++++++++|+
T Consensus 42 ~~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda 121 (242)
T 3r3h_A 42 MQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPA 121 (242)
T ss_dssp TSCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCH
T ss_pred CccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 57889999999999999999999999999999999999988768999999999999999999999999988899999999
Q ss_pred HHHHHHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCCCCCccccCCCCCCCCCcccchHHHHHHHH
Q 029803 81 LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLN 160 (187)
Q Consensus 81 ~~~~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (187)
.+.++.+... +..++||+||+|+....+..+++.+.++|+|||+|+++|++|.|.+.++..... ....+++|+
T Consensus 122 ~~~l~~~~~~-~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~------~~~~~~~~~ 194 (242)
T 3r3h_A 122 LDTLHSLLNE-GGEHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSG------QTREIKKLN 194 (242)
T ss_dssp HHHHHHHHHH-HCSSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCH------HHHHHHHHH
T ss_pred HHHHHHHhhc-cCCCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEECCccCCcccCccccCh------HHHHHHHHH
Confidence 9877764221 013789999999998889999999999999999999999999998877653321 556799999
Q ss_pred HHhhcCCCeEEEeeecCCceEEEEEcC
Q 029803 161 RSLADDPRVQLSHVALGDGITICRRIF 187 (187)
Q Consensus 161 ~~l~~~~~~~~~~lp~~~G~~~~~~~~ 187 (187)
+.+..+++++++++|+++|+.+++|++
T Consensus 195 ~~l~~~~~~~~~~lp~~dG~~~~~k~~ 221 (242)
T 3r3h_A 195 QVIKNDSRVFVSLLAIADGMFLVQPIA 221 (242)
T ss_dssp HHHHTCCSEEEEEESSSSCEEEEEEC-
T ss_pred HHHhhCCCEEEEEEEccCceEEEEEcC
Confidence 999999999999999999999999985
No 2
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=100.00 E-value=2.2e-33 Score=212.37 Aligned_cols=186 Identities=67% Similarity=1.137 Sum_probs=162.7
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcch
Q 029803 1 MLLLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 80 (187)
Q Consensus 1 ~~~~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 80 (187)
|++.+.+++++..++...++++|||||||+|++++++++.++++++++++|+++++++.++++++..++.++++++.+|+
T Consensus 52 ~~~~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda 131 (237)
T 3c3y_A 52 MSTSPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDA 131 (237)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred CCcCHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 46789999999999999999999999999999999999998768999999999999999999999999887899999999
Q ss_pred HHHHHHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCCCCCccccCCCCCCCCCcccchHHHHHHHH
Q 029803 81 LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLN 160 (187)
Q Consensus 81 ~~~~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (187)
.+.++.+...+...++||+||+|+++..+..+++.+.++|+|||++++++++|.|.+..+.+......+. ....+++|+
T Consensus 132 ~~~l~~l~~~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~~~~~g~~~~~~~~~~~~~r~-~~~~i~~~~ 210 (237)
T 3c3y_A 132 MLALDNLLQGQESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDNTLWGGTVAQPESEVPDFMKE-NREAVIELN 210 (237)
T ss_dssp HHHHHHHHHSTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECTTGGGGGGSCGGGSCGGGHH-HHHHHHHHH
T ss_pred HHHHHHHHhccCCCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEecCCcCCccCCCcccchhhHHH-HHHHHHHHH
Confidence 9887765322111368999999999889999999999999999999999999999887764333333344 567799999
Q ss_pred HHhhcCCCeEEEeeecCCceEEEEEcC
Q 029803 161 RSLADDPRVQLSHVALGDGITICRRIF 187 (187)
Q Consensus 161 ~~l~~~~~~~~~~lp~~~G~~~~~~~~ 187 (187)
+.+..+++++++.+|+++|+.+++|+.
T Consensus 211 ~~l~~~~~~~~~~lp~~dG~~~~~~~~ 237 (237)
T 3c3y_A 211 KLLAADPRIEIVHLPLGDGITFCRRLY 237 (237)
T ss_dssp HHHHHCTTEEEEEECSTTCEEEEEECC
T ss_pred HHHhcCCCeEEEEEEeCCceEEEEEcC
Confidence 999999999999999999999999973
No 3
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.4e-33 Score=211.34 Aligned_cols=174 Identities=22% Similarity=0.327 Sum_probs=156.4
Q ss_pred CCcHHHHHHHHHHHHHcCCC---EEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCC-CcEEEEE
Q 029803 2 LLLTIHGQLMAMLLRLVNAK---KTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD-HKINFIE 77 (187)
Q Consensus 2 ~~~~~~~~ll~~l~~~~~~~---~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~-~~~~~~~ 77 (187)
.+.+.+++++..++...+++ +|||||||+|+++++++..++++++|+++|+++++++.|+++++..++. +++++++
T Consensus 36 ~i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~ 115 (221)
T 3dr5_A 36 APDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLL 115 (221)
T ss_dssp CCCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred CCCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEE
Confidence 35789999999999998888 9999999999999999999877899999999999999999999999988 7899999
Q ss_pred cchHHHHHHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCCCCCccccCCCCCCCCCcccchHHHHH
Q 029803 78 SEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAIL 157 (187)
Q Consensus 78 ~d~~~~~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (187)
+|+.+.++.+ ..++||+||+|+....+..+++.+.++|+|||+++++|++|.|.+.++.... . ....++
T Consensus 116 gda~~~l~~~-----~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~-----~-~~~~~~ 184 (221)
T 3dr5_A 116 SRPLDVMSRL-----ANDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLADALLDGTIADQTRKD-----R-DTQAAR 184 (221)
T ss_dssp SCHHHHGGGS-----CTTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCC-----H-HHHHHH
T ss_pred cCHHHHHHHh-----cCCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCC-----h-HHHHHH
Confidence 9999876653 1478999999999889999999999999999999999999999887764321 1 455789
Q ss_pred HHHHHhhcCCCeEEEeeecCCceEEEEEc
Q 029803 158 DLNRSLADDPRVQLSHVALGDGITICRRI 186 (187)
Q Consensus 158 ~~~~~l~~~~~~~~~~lp~~~G~~~~~~~ 186 (187)
+|++.+.++++++++++|+++|+++++|-
T Consensus 185 ~~~~~l~~~~~~~~~~lp~gdGl~~~~~~ 213 (221)
T 3dr5_A 185 DADEYIRSIEGAHVARLPLGAGLTVVTKA 213 (221)
T ss_dssp HHHHHHTTCTTEEEEEESSTTCEEEEEEC
T ss_pred HHHHHHhhCCCeeEEEeeccchHHHHHHH
Confidence 99999999999999999999999999973
No 4
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=100.00 E-value=4.9e-33 Score=211.70 Aligned_cols=186 Identities=59% Similarity=1.007 Sum_probs=161.6
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcch
Q 029803 1 MLLLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 80 (187)
Q Consensus 1 ~~~~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 80 (187)
|++.+.+++++..++...++++|||||||+|+++++++..++++++|+++|+++++++.|+++++..++.++++++.+|+
T Consensus 61 ~~~~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda 140 (247)
T 1sui_A 61 MTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPA 140 (247)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred CCcCHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH
Confidence 56789999999999999999999999999999999999998767999999999999999999999999878899999999
Q ss_pred HHHHHHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCCCCCccccCCCCCCCCCc-ccchHHHHHHH
Q 029803 81 LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHF-RGSSRQAILDL 159 (187)
Q Consensus 81 ~~~~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 159 (187)
.+.++.+...+...++||+||+|+....+..+++.+.++|+|||+|++++++|.|.+..+........ +. ....+++|
T Consensus 141 ~~~l~~l~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~-~~~~i~~~ 219 (247)
T 1sui_A 141 LPVLDEMIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRY-YRDFVLEL 219 (247)
T ss_dssp HHHHHHHHHSGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEECTTGGGGGGCCTTSCCCHHHHH-HHHHHHHH
T ss_pred HHHHHHHHhccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEecCCcCCcccCCCccchhhhhhH-HHHHHHHH
Confidence 98777653210013689999999988889999999999999999999999999999887654332211 33 46679999
Q ss_pred HHHhhcCCCeEEEeeecCCceEEEEEcC
Q 029803 160 NRSLADDPRVQLSHVALGDGITICRRIF 187 (187)
Q Consensus 160 ~~~l~~~~~~~~~~lp~~~G~~~~~~~~ 187 (187)
++.+..+++++...+|+++|+++++|+.
T Consensus 220 ~~~l~~~~~~~~~~lp~~dG~~l~~k~~ 247 (247)
T 1sui_A 220 NKALAVDPRIEICMLPVGDGITICRRIK 247 (247)
T ss_dssp HHHHHTCTTBCCEEECSTTCEEEECBCC
T ss_pred HHHHhhCCCeEEEEEecCCccEEEEEcC
Confidence 9999999999999999999999999873
No 5
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=100.00 E-value=3e-31 Score=198.40 Aligned_cols=179 Identities=24% Similarity=0.390 Sum_probs=158.9
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcch
Q 029803 1 MLLLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 80 (187)
Q Consensus 1 ~~~~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 80 (187)
|++++..++++..++...++.+|||||||+|+++.+++..++++++|+++|+++++++.+++++...++.++++++++|+
T Consensus 40 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 119 (223)
T 3duw_A 40 HDVSPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLA 119 (223)
T ss_dssp CSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 56789999999999999999999999999999999999998767899999999999999999999999988899999999
Q ss_pred HHHHHHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCCCCCccccCCCCCCCCCcccchHHHHHHHH
Q 029803 81 LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLN 160 (187)
Q Consensus 81 ~~~~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (187)
.+.++.+... ..++||+||+|+....+..+++.+.++|+|||+++++++++.|.+..+.... . ....+++|+
T Consensus 120 ~~~~~~~~~~--~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~-~-----~~~~~~~~~ 191 (223)
T 3duw_A 120 LDSLQQIENE--KYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSND-P-----RVQGIRRFY 191 (223)
T ss_dssp HHHHHHHHHT--TCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCC-H-----HHHHHHHHH
T ss_pred HHHHHHHHhc--CCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccc-h-----HHHHHHHHH
Confidence 8877665322 1257999999998888899999999999999999999999999877764321 1 556799999
Q ss_pred HHhhcCCCeEEEeeec-----CCceEEEEEcC
Q 029803 161 RSLADDPRVQLSHVAL-----GDGITICRRIF 187 (187)
Q Consensus 161 ~~l~~~~~~~~~~lp~-----~~G~~~~~~~~ 187 (187)
+.+..+++++++++|+ ++|+.+++++|
T Consensus 192 ~~l~~~~~~~~~~~p~~~~~~~dG~~~~~~~~ 223 (223)
T 3duw_A 192 ELIAAEPRVSATALQTVGSKGYDGFIMAVVKE 223 (223)
T ss_dssp HHHHHCTTEEEEEEEEEETTEEEEEEEEEEC-
T ss_pred HHHhhCCCeEEEEEeccCCCCCCeeEEEEEeC
Confidence 9999999999999999 99999999986
No 6
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=100.00 E-value=2e-31 Score=201.04 Aligned_cols=179 Identities=41% Similarity=0.628 Sum_probs=158.4
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcch
Q 029803 1 MLLLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 80 (187)
Q Consensus 1 ~~~~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 80 (187)
|.+.+.+++++..++...++++|||||||+|+++.+++..++++++++++|+++++++.|+++++..++.++++++.+|+
T Consensus 54 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~ 133 (232)
T 3cbg_A 54 MQISPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPA 133 (232)
T ss_dssp GSCCHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH
T ss_pred cCcCHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 56889999999999999999999999999999999999988767899999999999999999999988877899999999
Q ss_pred HHHHHHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCCCCCccccCCCCCCCCCcccchHHHHHHHH
Q 029803 81 LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLN 160 (187)
Q Consensus 81 ~~~~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (187)
.+.++.+... ...++||+||+|+....+..+++++.++|+|||+++++++.|.|.+.++... .. ....+++|+
T Consensus 134 ~~~l~~l~~~-~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~-----~~-~~~~~~~~~ 206 (232)
T 3cbg_A 134 LATLEQLTQG-KPLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQ-----EA-QTQVLQQFN 206 (232)
T ss_dssp HHHHHHHHTS-SSCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCC-----SH-HHHHHHHHH
T ss_pred HHHHHHHHhc-CCCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccC-----Ch-HHHHHHHHH
Confidence 8877665321 0016899999999888899999999999999999999999999988766422 11 667899999
Q ss_pred HHhhcCCCeEEEeeecCCceEEEEEc
Q 029803 161 RSLADDPRVQLSHVALGDGITICRRI 186 (187)
Q Consensus 161 ~~l~~~~~~~~~~lp~~~G~~~~~~~ 186 (187)
+.+..+++++++.+|+++|+.+++|+
T Consensus 207 ~~l~~~~~~~~~~lp~~dG~~~~~~~ 232 (232)
T 3cbg_A 207 RDLAQDERVRISVIPLGDGMTLALKK 232 (232)
T ss_dssp HHHTTCTTEEEEEECSBTCEEEEEEC
T ss_pred HHHhhCCCeEEEEEEcCCeEEEEEeC
Confidence 99999999999999999999999985
No 7
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=100.00 E-value=1.9e-31 Score=199.66 Aligned_cols=179 Identities=36% Similarity=0.559 Sum_probs=158.6
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcch
Q 029803 1 MLLLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 80 (187)
Q Consensus 1 ~~~~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 80 (187)
|++++..++++..++...++.+|||||||+|.++.+++..++++++|+++|+++++++.++++++..++.++++++++|+
T Consensus 46 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 125 (225)
T 3tr6_A 46 MQTAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPA 125 (225)
T ss_dssp GSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCH
Confidence 46788999999999999999999999999999999999988767899999999999999999999999888899999999
Q ss_pred HHHHHHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCCCCCccccCCCCCCCCCcccchHHHHHHHH
Q 029803 81 LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLN 160 (187)
Q Consensus 81 ~~~~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (187)
.+.++.+... +..++||+||+++....+..+++.+.++|+|||+++++|++|.|.+..+.... . ....+++|+
T Consensus 126 ~~~~~~~~~~-~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~-~-----~~~~~~~~~ 198 (225)
T 3tr6_A 126 KDTLAELIHA-GQAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQS-E-----NNQLIRLFN 198 (225)
T ss_dssp HHHHHHHHTT-TCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCC-H-----HHHHHHHHH
T ss_pred HHHHHHhhhc-cCCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccC-h-----HHHHHHHHH
Confidence 8877665311 01168999999998888999999999999999999999999999887765331 1 456799999
Q ss_pred HHhhcCCCeEEEeeecCCceEEEEEc
Q 029803 161 RSLADDPRVQLSHVALGDGITICRRI 186 (187)
Q Consensus 161 ~~l~~~~~~~~~~lp~~~G~~~~~~~ 186 (187)
+.+..+++++++.+|+++|+.+++|+
T Consensus 199 ~~l~~~~~~~~~~lp~~dG~~~~~k~ 224 (225)
T 3tr6_A 199 QKVYKDERVDMILIPIGDGLTLARKK 224 (225)
T ss_dssp HHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHhcCCCeEEEEEEcCCccEEEEEC
Confidence 99999999999999999999999986
No 8
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=7.6e-31 Score=199.66 Aligned_cols=177 Identities=28% Similarity=0.481 Sum_probs=157.8
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcch
Q 029803 1 MLLLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 80 (187)
Q Consensus 1 ~~~~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 80 (187)
|++++..++++..++...++++|||||||+|+++..++..++++++|+++|+++++++.|+++++..++.++++++.+|+
T Consensus 45 ~~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~ 124 (248)
T 3tfw_A 45 HDVAANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPA 124 (248)
T ss_dssp CCCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred cccCHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 46789999999999999999999999999999999999988767899999999999999999999999888899999999
Q ss_pred HHHHHHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCCCCCccccCCCCCCCCCcccchHHHHHHHH
Q 029803 81 LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLN 160 (187)
Q Consensus 81 ~~~~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (187)
.+.++.+. ..++||+||+|+....+..+++.+.++|+|||+|+++++++.|.+..+.... . ....+++|+
T Consensus 125 ~~~l~~~~----~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~-----~-~~~~~~~~~ 194 (248)
T 3tfw_A 125 LQSLESLG----ECPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSAD-----E-RVQGVRQFI 194 (248)
T ss_dssp HHHHHTCC----SCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCC-----H-HHHHHHHHH
T ss_pred HHHHHhcC----CCCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccccc-----h-HHHHHHHHH
Confidence 88776541 1358999999998888999999999999999999999999999887764321 1 667799999
Q ss_pred HHhhcCCCeEEEee-ecC----CceEEEEEcC
Q 029803 161 RSLADDPRVQLSHV-ALG----DGITICRRIF 187 (187)
Q Consensus 161 ~~l~~~~~~~~~~l-p~~----~G~~~~~~~~ 187 (187)
+.+..+++++.+.+ |++ +|+.++++++
T Consensus 195 ~~l~~~~~~~~~~l~~~g~~~~DG~~i~~~~~ 226 (248)
T 3tfw_A 195 EMMGAEPRLTATALQTVGTKGWDGFTLAWVNA 226 (248)
T ss_dssp HHHHHCTTEEEEEEEECSTTCSEEEEEEEECC
T ss_pred HHHhhCCCEEEEEeecCCCCCCCeeEEEEEeC
Confidence 99999999999888 676 9999999985
No 9
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=100.00 E-value=2.1e-31 Score=200.79 Aligned_cols=176 Identities=24% Similarity=0.343 Sum_probs=155.5
Q ss_pred CcHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH
Q 029803 3 LLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 82 (187)
Q Consensus 3 ~~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 82 (187)
+.+..++++..++...++.+|||||||+|+++.+++...+ +.+|+++|+++++++.|+++++..++.++++++.+|+.+
T Consensus 55 ~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 133 (232)
T 3ntv_A 55 VDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALE 133 (232)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCT-TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGG
T ss_pred cCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHH
Confidence 4678899999999999999999999999999999999666 789999999999999999999999988789999999988
Q ss_pred HHH-HHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCCCCCccccCCCCCCCCCcccchHHHHHHHHH
Q 029803 83 VLD-QLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNR 161 (187)
Q Consensus 83 ~~~-~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (187)
.++ .+ .++||+||++.....+..+++.+.++|+|||+++++|++|.|.+.++....++..+. ....+++|++
T Consensus 134 ~~~~~~------~~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d~~~~~g~v~~~~~~~~~~~~~-~~~~~~~~~~ 206 (232)
T 3ntv_A 134 QFENVN------DKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIGIVRSRNVRQ-MVKKVQDYNE 206 (232)
T ss_dssp CHHHHT------TSCEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEECTTGGGGGGCGGGGGCHHHHH-HHHHHHHHHH
T ss_pred HHHhhc------cCCccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEeeCCcCccccCcccccchhhhH-HHHHHHHHHH
Confidence 766 43 478999999999889999999999999999999999999999887764311222222 4567999999
Q ss_pred HhhcCCCeEEEeeecCCceEEEEEc
Q 029803 162 SLADDPRVQLSHVALGDGITICRRI 186 (187)
Q Consensus 162 ~l~~~~~~~~~~lp~~~G~~~~~~~ 186 (187)
.+..+++++++.+|+++|+.+++|+
T Consensus 207 ~l~~~~~~~~~~lp~~dG~~i~~k~ 231 (232)
T 3ntv_A 207 WLIKQPGYTTNFLNIDDGLAISIKG 231 (232)
T ss_dssp HHHTCTTEEEEEECSTTCEEEEEEC
T ss_pred HHhcCCCeEEEEEEcCCceEEEEEC
Confidence 9999999999999999999999986
No 10
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.98 E-value=2.5e-30 Score=194.08 Aligned_cols=179 Identities=39% Similarity=0.658 Sum_probs=157.3
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcch
Q 029803 1 MLLLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 80 (187)
Q Consensus 1 ~~~~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 80 (187)
|.+++..++++..++...++++|||||||+|+++..++..++++++++++|+++++++.++++++..++.++++++++|+
T Consensus 51 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~ 130 (229)
T 2avd_A 51 SMMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPA 130 (229)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred CccCHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCH
Confidence 45778899999999999999999999999999999999988767899999999999999999999988877899999999
Q ss_pred HHHHHHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCCCCCccccCCCCCCCCCcccchHHHHHHHH
Q 029803 81 LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLN 160 (187)
Q Consensus 81 ~~~~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (187)
.+.++.+... ...++||+||+|.....+..+++.+.++|+|||++++++++|.|.+.++... .. ....+++|+
T Consensus 131 ~~~~~~~~~~-~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~-----~~-~~~~~~~~~ 203 (229)
T 2avd_A 131 LETLDELLAA-GEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKG-----DV-AAECVRNLN 203 (229)
T ss_dssp HHHHHHHHHT-TCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTT-----CH-HHHHHHHHH
T ss_pred HHHHHHHHhc-CCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECCCcCCcccCcccC-----Ch-HHHHHHHHH
Confidence 8877665321 0116899999999888889999999999999999999999999988765322 11 667799999
Q ss_pred HHhhcCCCeEEEeeecCCceEEEEEc
Q 029803 161 RSLADDPRVQLSHVALGDGITICRRI 186 (187)
Q Consensus 161 ~~l~~~~~~~~~~lp~~~G~~~~~~~ 186 (187)
+.+..+++++++.+|+++|+.+++|+
T Consensus 204 ~~l~~~~~~~~~~lp~~dGl~~~~k~ 229 (229)
T 2avd_A 204 ERIRRDVRVYISLLPLGDGLTLAFKI 229 (229)
T ss_dssp HHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHhhCCCEEEEEEecCCceEEEEEC
Confidence 99999999999999999999999985
No 11
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.97 E-value=1.6e-28 Score=185.63 Aligned_cols=180 Identities=38% Similarity=0.568 Sum_probs=156.6
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcch
Q 029803 1 MLLLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 80 (187)
Q Consensus 1 ~~~~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 80 (187)
|.+.+..++++..++...++.+|||||||+|+++..++..++++++|+++|+++++++.+++++...++.++++++.+|+
T Consensus 42 ~~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~ 121 (239)
T 2hnk_A 42 MQISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSA 121 (239)
T ss_dssp CSCCHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCH
Confidence 56789999999999999999999999999999999999988767899999999999999999999988877899999999
Q ss_pred HHHHHHHhh--------cccCC--CceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCCCCCccccCCCCCCCCCccc
Q 029803 81 LSVLDQLLK--------YSENE--GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRG 150 (187)
Q Consensus 81 ~~~~~~~~~--------~~~~~--~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~ 150 (187)
.+.++.+.. ++... ++||+||++.....+..+++.+.++|+|||++++++++|.|.+.++... ..
T Consensus 122 ~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~-----~~ 196 (239)
T 2hnk_A 122 LETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQ-----EP 196 (239)
T ss_dssp HHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCC-----CH
T ss_pred HHHHHHHHhhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEccccCCcccCcccc-----ch
Confidence 887665421 00111 6899999998888889999999999999999999999999987755422 11
Q ss_pred chHHHHHHHHHHhhcCCCeEEEeeecCCceEEEEEc
Q 029803 151 SSRQAILDLNRSLADDPRVQLSHVALGDGITICRRI 186 (187)
Q Consensus 151 ~~~~~~~~~~~~l~~~~~~~~~~lp~~~G~~~~~~~ 186 (187)
....+++|++.+..++++.+.++|+++|+.+++|+
T Consensus 197 -~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~ 231 (239)
T 2hnk_A 197 -STVGIRKFNELVYNDSLVDVSLVPIADGVSLVRKR 231 (239)
T ss_dssp -HHHHHHHHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred -HHHHHHHHHHHHhhCCCeEEEEEEcCCceEeeeeh
Confidence 66779999999999999999999999999999986
No 12
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.97 E-value=6.9e-29 Score=184.12 Aligned_cols=170 Identities=20% Similarity=0.289 Sum_probs=144.9
Q ss_pred CcHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH
Q 029803 3 LLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 82 (187)
Q Consensus 3 ~~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 82 (187)
+.+..++++..++...++.+|||||||+|+++.+++..++++++|+++|+++++++.++++++..++.++++++++|+.+
T Consensus 40 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 119 (210)
T 3c3p_A 40 VDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLG 119 (210)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHH
Confidence 56788899999988889999999999999999999998876789999999999999999999988887789999999988
Q ss_pred HHHHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCCCCCccccCCCCCCCCCcccchHHHHHHHHHH
Q 029803 83 VLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRS 162 (187)
Q Consensus 83 ~~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (187)
.++.+ .+ ||+||++.....+..+++.+.++|+|||++++++++|.|.+.++ .... ....+++|++.
T Consensus 120 ~~~~~------~~-fD~v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~--~~~~-----~~~~~~~~~~~ 185 (210)
T 3c3p_A 120 IAAGQ------RD-IDILFMDCDVFNGADVLERMNRCLAKNALLIAVNALRRGSVAES--HEDP-----ETAALREFNHH 185 (210)
T ss_dssp HHTTC------CS-EEEEEEETTTSCHHHHHHHHGGGEEEEEEEEEESSSSCC-------------------CCCHHHHH
T ss_pred HhccC------CC-CCEEEEcCChhhhHHHHHHHHHhcCCCeEEEEECccccCcccCc--ccch-----HHHHHHHHHHH
Confidence 66543 35 99999998888899999999999999999999999998876633 1112 33448999999
Q ss_pred hhcCCCeEEEeeecCCceEEEEEc
Q 029803 163 LADDPRVQLSHVALGDGITICRRI 186 (187)
Q Consensus 163 l~~~~~~~~~~lp~~~G~~~~~~~ 186 (187)
+..++++....+|+++|+.+++|+
T Consensus 186 l~~~~~~~~~~~p~~~G~~~~~~~ 209 (210)
T 3c3p_A 186 LSRRRDFFTTIVPVGNGVLLGYRL 209 (210)
T ss_dssp HTTCTTEEEEEECSTTCEEEEEEC
T ss_pred HhhCCCeEEEEEecCCceEEEEeC
Confidence 999999999999999999999986
No 13
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.96 E-value=5.6e-28 Score=180.69 Aligned_cols=164 Identities=22% Similarity=0.364 Sum_probs=141.7
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcch
Q 029803 1 MLLLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 80 (187)
Q Consensus 1 ~~~~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 80 (187)
|++++..++++..++...++++|||||||+|.+++++++.++++++|+++|+++++++.|+++++..++.++++++++|+
T Consensus 40 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 119 (221)
T 3u81_A 40 MNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGAS 119 (221)
T ss_dssp GGCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCH
Confidence 56889999999999999999999999999999999999987668999999999999999999999999888899999999
Q ss_pred HHHHHHHhhcccCCCceeEEEEeCCCcccHH---HHHHHHhccCCCeEEEEeCCCCCccccCCCCCCCCCcccchHHHHH
Q 029803 81 LSVLDQLLKYSENEGSFDYAFVDADKDNYCN---YHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAIL 157 (187)
Q Consensus 81 ~~~~~~~~~~~~~~~~~D~i~~d~~~~~~~~---~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (187)
.+.++.+... ...++||+||+|+....+.. +++.+ ++|+|||+++++++.+.+ .+
T Consensus 120 ~~~l~~~~~~-~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~~~--------------------~~ 177 (221)
T 3u81_A 120 QDLIPQLKKK-YDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIVPG--------------------TP 177 (221)
T ss_dssp HHHGGGTTTT-SCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCCCC--------------------CH
T ss_pred HHHHHHHHHh-cCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCCcc--------------------hH
Confidence 8876654210 01268999999987777664 45555 999999999999998755 47
Q ss_pred HHHHHhhcCCCeEEEeee-------cCCceEEEEEc
Q 029803 158 DLNRSLADDPRVQLSHVA-------LGDGITICRRI 186 (187)
Q Consensus 158 ~~~~~l~~~~~~~~~~lp-------~~~G~~~~~~~ 186 (187)
+|.+.+.++++++...+| +++|+.+++++
T Consensus 178 ~~~~~l~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~ 213 (221)
T 3u81_A 178 DFLAYVRGSSSFECTHYSSYLEYMKVVDGLEKAIYQ 213 (221)
T ss_dssp HHHHHHHHCTTEEEEEEEEEETTTTEEEEEEEEEEC
T ss_pred HHHHHHhhCCCceEEEcccccccCCCCCceEEEEEe
Confidence 888999999999999998 79999999986
No 14
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.95 E-value=5.8e-27 Score=176.34 Aligned_cols=178 Identities=25% Similarity=0.408 Sum_probs=138.1
Q ss_pred CcHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH
Q 029803 3 LLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 82 (187)
Q Consensus 3 ~~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 82 (187)
+.+..++++..++...++.+|||||||+|..+..++..++ +.+|+++|+++++++.|++++...++.++++++.+|+.+
T Consensus 38 ~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 116 (233)
T 2gpy_A 38 MDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQ 116 (233)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGG
T ss_pred cCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHH
Confidence 5678889999999999999999999999999999999987 789999999999999999999998887789999999987
Q ss_pred HHHHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCCCCCccccCCCCCCCCCcccchHHHHHHHHHH
Q 029803 83 VLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRS 162 (187)
Q Consensus 83 ~~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (187)
.++... ..++||+|+++.....+..+++.+.++|+|||+++++++++.|.+..+.. ..+..+. ....+++|++.
T Consensus 117 ~~~~~~----~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~-~~~~~~~-~~~~~~~~~~~ 190 (233)
T 2gpy_A 117 LGEKLE----LYPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDNVLFRGLVAETDI-EHKRHKQ-LATKIDTYNQW 190 (233)
T ss_dssp SHHHHT----TSCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEETTTC---------------------------CT
T ss_pred HHHhcc----cCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEcCCcCCccCCccc-cccchhH-HHHHHHHHHHH
Confidence 655431 13689999999877788899999999999999999999999886654321 1111111 33457888899
Q ss_pred hhcCCCeEEEeeecCCceEEEEEcC
Q 029803 163 LADDPRVQLSHVALGDGITICRRIF 187 (187)
Q Consensus 163 l~~~~~~~~~~lp~~~G~~~~~~~~ 187 (187)
+..++++.+.++|+++|+.+++|++
T Consensus 191 l~~~~~~~~~~~p~~dG~~~~~~~~ 215 (233)
T 2gpy_A 191 LLEHPQYDTRIFPVGDGIAISIKRE 215 (233)
T ss_dssp TTTCTTEEEEEECSTTCEEEEEEC-
T ss_pred HHhCCCeEEEEEEcCCeEEEEEEcC
Confidence 9999999999999999999999864
No 15
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.84 E-value=7.2e-20 Score=134.12 Aligned_cols=148 Identities=12% Similarity=0.069 Sum_probs=114.7
Q ss_pred CCcHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCC--CCcEEEEEcc
Q 029803 2 LLLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGV--DHKINFIESE 79 (187)
Q Consensus 2 ~~~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~--~~~~~~~~~d 79 (187)
.+++.++++|+. ...++++|||||| |++++++|+. + +++|+++|.+++..+.++++++.+++ .++++++.+|
T Consensus 15 ~v~~~~~~~L~~--~l~~a~~VLEiGt--GySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gd 88 (202)
T 3cvo_A 15 TMPPAEAEALRM--AYEEAEVILEYGS--GGSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTD 88 (202)
T ss_dssp CSCHHHHHHHHH--HHHHCSEEEEESC--SHHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECC
T ss_pred cCCHHHHHHHHH--HhhCCCEEEEECc--hHHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeC
Confidence 578899999998 5568899999998 6899999984 4 78999999999999999999999998 7899999999
Q ss_pred hHHH--------------HHHH----hhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCCCCCccccCCC
Q 029803 80 ALSV--------------LDQL----LKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPE 141 (187)
Q Consensus 80 ~~~~--------------~~~~----~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~ 141 (187)
+.+. ++.+ ... ...++||+||+|+.+.. .++..++++|+|||+|+++|+++..+.
T Consensus 89 a~~~~~wg~p~~~~~~~~l~~~~~~i~~~-~~~~~fDlIfIDg~k~~--~~~~~~l~~l~~GG~Iv~DNv~~r~~y---- 161 (202)
T 3cvo_A 89 IGPTGDWGHPVSDAKWRSYPDYPLAVWRT-EGFRHPDVVLVDGRFRV--GCALATAFSITRPVTLLFDDYSQRRWQ---- 161 (202)
T ss_dssp CSSBCGGGCBSSSTTGGGTTHHHHGGGGC-TTCCCCSEEEECSSSHH--HHHHHHHHHCSSCEEEEETTGGGCSSG----
T ss_pred chhhhcccccccchhhhhHHHHhhhhhcc-ccCCCCCEEEEeCCCch--hHHHHHHHhcCCCeEEEEeCCcCCcch----
Confidence 6432 2211 111 11368999999997653 667778899999999999997654421
Q ss_pred CCCCCCcccchHHHHHHHHHHhhcCCCeEEEee
Q 029803 142 EQVPDHFRGSSRQAILDLNRSLADDPRVQLSHV 174 (187)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l 174 (187)
..+.+|.+.+...++.....+
T Consensus 162 ------------~~v~~~~~~~~~~~~~a~f~~ 182 (202)
T 3cvo_A 162 ------------HQVEEFLGAPLMIGRLAAFQV 182 (202)
T ss_dssp ------------GGGHHHHCCCEEETTEEEEEE
T ss_pred ------------HHHHHHHhHHhhcCceEEEEe
Confidence 126788777777777554443
No 16
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=99.82 E-value=1.2e-19 Score=139.53 Aligned_cols=158 Identities=12% Similarity=0.088 Sum_probs=124.1
Q ss_pred cHHHHHHHHHHHHH----cCCCEEEEEcccccHHHHHHHhhCC----CCCEEEEEeCCc---------------------
Q 029803 4 LTIHGQLMAMLLRL----VNAKKTIEIGVFTGYSLLLTALTIP----EDGQITAIDVNR--------------------- 54 (187)
Q Consensus 4 ~~~~~~ll~~l~~~----~~~~~vLeiG~g~G~~~~~la~~~~----~~~~v~~iD~~~--------------------- 54 (187)
......+|+.+++. ..|..|||+|++.|+++++++..++ ++.+|+++|..+
T Consensus 87 ~~~r~~~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~ 166 (282)
T 2wk1_A 87 GIKRLENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRR 166 (282)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGG
T ss_pred CHHHHHHHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccc
Confidence 34556677777664 5689999999999999999988764 368999999632
Q ss_pred -----chHHHHHHHHHhcCCC-CcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCC-cccHHHHHHHHhccCCCeEEE
Q 029803 55 -----ETYEIGLPIIKKAGVD-HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-DNYCNYHERLMKLLKVGGIAV 127 (187)
Q Consensus 55 -----~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~-~~~~~~~~~~~~~L~~gG~lv 127 (187)
..++.+++++++.++. ++++++.|++.+.++.+ ..++||+||+|++. +.+..+++.++++|+|||+|+
T Consensus 167 ~~~~~~~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~-----~~~~~d~vfIDaD~y~~~~~~Le~~~p~L~pGGiIv 241 (282)
T 2wk1_A 167 NSVLAVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTA-----PIDTLAVLRMDGDLYESTWDTLTNLYPKVSVGGYVI 241 (282)
T ss_dssp HHHHCCCHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTC-----CCCCEEEEEECCCSHHHHHHHHHHHGGGEEEEEEEE
T ss_pred cccchhHHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhC-----CCCCEEEEEEcCCccccHHHHHHHHHhhcCCCEEEE
Confidence 1467799999999984 88999999999988764 24689999999986 457789999999999999999
Q ss_pred EeCCCC-CccccCCCCCCCCCcccchHHHHHHHHHHhhcCCCeEEEeeecCCceEEEEEc
Q 029803 128 YDNTLW-GGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDGITICRRI 186 (187)
Q Consensus 128 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~~G~~~~~~~ 186 (187)
+||+.+ .| ...++++|++. .++...+++++.+..+-+|.
T Consensus 242 ~DD~~~~~G----------------~~~Av~Ef~~~----~~i~~~i~~~~~~~v~~rk~ 281 (282)
T 2wk1_A 242 VDDYMMCPP----------------CKDAVDEYRAK----FDIADELITIDRDGVYWQRT 281 (282)
T ss_dssp ESSCTTCHH----------------HHHHHHHHHHH----TTCCSCCEECSSSCEEEECC
T ss_pred EcCCCCCHH----------------HHHHHHHHHHh----cCCceEEEEecCEEEEEEeC
Confidence 999864 22 55566666555 34666788888877776663
No 17
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.77 E-value=1.6e-18 Score=135.32 Aligned_cols=149 Identities=15% Similarity=0.218 Sum_probs=114.3
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHh--cCC-CCcEEEEEcchHHHHHHHhhcccC
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKK--AGV-DHKINFIESEALSVLDQLLKYSEN 93 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~--~~~-~~~~~~~~~d~~~~~~~~~~~~~~ 93 (187)
..++++|||||||+|..+..+++..+ ..+++++|+++++++.|++++.. .++ .++++++.+|+.+.++..
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~------ 165 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKHPS-VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQN------ 165 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTC------
T ss_pred CCCCCEEEEECCCchHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhC------
Confidence 35788999999999999999998754 68999999999999999999875 343 467999999998876542
Q ss_pred CCceeEEEEeCCCc-------ccHHHHHHHHhccCCCeEEEEeCC-CCCccccCCCCCCCCCcccchHHHHHHHHHHhhc
Q 029803 94 EGSFDYAFVDADKD-------NYCNYHERLMKLLKVGGIAVYDNT-LWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLAD 165 (187)
Q Consensus 94 ~~~~D~i~~d~~~~-------~~~~~~~~~~~~L~~gG~lv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 165 (187)
.++||+|++|.... ....+++.+.++|+|||+++++.. .|... . ....+.++++.+..
T Consensus 166 ~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~-------------~-~~~~~~~~l~~~f~ 231 (304)
T 2o07_A 166 QDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHL-------------D-LIKEMRQFCQSLFP 231 (304)
T ss_dssp SSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTCH-------------H-HHHHHHHHHHHHCS
T ss_pred CCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccch-------------H-HHHHHHHHHHHhCC
Confidence 47899999996432 235689999999999999999763 23210 1 44557788888877
Q ss_pred CCCeEEEeeec---C-CceEEEEEc
Q 029803 166 DPRVQLSHVAL---G-DGITICRRI 186 (187)
Q Consensus 166 ~~~~~~~~lp~---~-~G~~~~~~~ 186 (187)
+.++....+|. + .|+.+++|.
T Consensus 232 ~v~~~~~~vP~~~~g~~g~~~as~~ 256 (304)
T 2o07_A 232 VVAYAYCTIPTYPSGQIGFMLCSKN 256 (304)
T ss_dssp EEEEEEEECTTSGGGEEEEEEEESS
T ss_pred CceeEEEEeccccCcceEEEEEeCC
Confidence 77777677775 2 578888763
No 18
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.77 E-value=3.6e-18 Score=133.75 Aligned_cols=150 Identities=18% Similarity=0.226 Sum_probs=110.7
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhc--CC-CCcEEEEEcchHHHHHHHhhcccC
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--GV-DHKINFIESEALSVLDQLLKYSEN 93 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~~~~~~~~ 93 (187)
..++++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++... ++ .++++++.+|+.+.++..
T Consensus 106 ~~~~~~VLdIG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~------ 178 (314)
T 2b2c_A 106 HPDPKRVLIIGGGDGGILREVLKHES-VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNH------ 178 (314)
T ss_dssp SSSCCEEEEESCTTSHHHHHHTTCTT-CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHC------
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhc------
Confidence 45788999999999999999998754 789999999999999999998653 33 468999999998876542
Q ss_pred CCceeEEEEeCCCc------cc-HHHHHHHHhccCCCeEEEEeCCCCCccccCCCCCCCCCcccchHHHHHHHHHHhhcC
Q 029803 94 EGSFDYAFVDADKD------NY-CNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADD 166 (187)
Q Consensus 94 ~~~~D~i~~d~~~~------~~-~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 166 (187)
.++||+|++|.... .+ ..+++.+.++|+|||+++++.... .. ... ....+.++++.+-.+
T Consensus 179 ~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~----~~--------~~~-~~~~~~~~l~~vF~~ 245 (314)
T 2b2c_A 179 KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESV----WL--------HLP-LIAHLVAFNRKIFPA 245 (314)
T ss_dssp TTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEECCCT----TT--------CHH-HHHHHHHHHHHHCSE
T ss_pred CCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCc----cc--------CHH-HHHHHHHHHHHHCCc
Confidence 47899999986321 12 678999999999999999975211 00 000 334466677777666
Q ss_pred CCeEEEeeec---CC-ceEEEEEc
Q 029803 167 PRVQLSHVAL---GD-GITICRRI 186 (187)
Q Consensus 167 ~~~~~~~lp~---~~-G~~~~~~~ 186 (187)
.++....+|. |+ |+.++.|+
T Consensus 246 v~~~~~~iP~~~~g~~g~~~ask~ 269 (314)
T 2b2c_A 246 VTYAQSIVSTYPSGSMGYLICAKN 269 (314)
T ss_dssp EEEEEEECTTSGGGEEEEEEEESS
T ss_pred ceEEEEEecCcCCCceEEEEEeCC
Confidence 6666777776 34 78888764
No 19
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.76 E-value=2.2e-18 Score=129.94 Aligned_cols=116 Identities=19% Similarity=0.261 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhh---CCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchH
Q 029803 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALT---IPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEAL 81 (187)
Q Consensus 5 ~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~---~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 81 (187)
+.+..++..++...++.+|||||||+|+++..+++. +.++++|+++|+++++++.|+ +...+++++++|+.
T Consensus 67 p~~~~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~~~v~~~~gD~~ 140 (236)
T 2bm8_A 67 PDTQAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDMENITLHQGDCS 140 (236)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGCTTEEEEECCSS
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccCCceEEEECcch
Confidence 777888888888888999999999999999999987 334789999999999998887 12357999999987
Q ss_pred HH--HHHHhhcccCCCceeEEEEeCCCcccHHHHHHHHh-ccCCCeEEEEeCC
Q 029803 82 SV--LDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMK-LLKVGGIAVYDNT 131 (187)
Q Consensus 82 ~~--~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~-~L~~gG~lv~~~~ 131 (187)
+. ++.+ ...+||+|+++..+..+..+++++.+ +|+|||++++++.
T Consensus 141 ~~~~l~~~-----~~~~fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 141 DLTTFEHL-----REMAHPLIFIDNAHANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp CSGGGGGG-----SSSCSSEEEEESSCSSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred hHHHHHhh-----ccCCCCEEEECCchHhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 63 3322 12479999999877788889999996 9999999999876
No 20
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.76 E-value=1.5e-17 Score=122.74 Aligned_cols=116 Identities=16% Similarity=0.131 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029803 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 84 (187)
Q Consensus 5 ~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 84 (187)
+.....+...+...++.+|||+|||+|..+..+++. +.+|+++|+++++++.|+++++..++.++++++++|+.+.+
T Consensus 41 ~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~ 117 (204)
T 3njr_A 41 SPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL 117 (204)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc
Confidence 344445555556677889999999999999999986 57999999999999999999999998767999999997743
Q ss_pred HHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 85 DQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
+. .++||+|+++... ... +++++.+.|+|||.+++....
T Consensus 118 ~~-------~~~~D~v~~~~~~-~~~-~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 118 AD-------LPLPEAVFIGGGG-SQA-LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp TT-------SCCCSEEEECSCC-CHH-HHHHHHHHSCTTCEEEEEECS
T ss_pred cc-------CCCCCEEEECCcc-cHH-HHHHHHHhcCCCcEEEEEecC
Confidence 32 3589999998743 444 899999999999999996543
No 21
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.76 E-value=1.3e-17 Score=123.79 Aligned_cols=168 Identities=15% Similarity=0.138 Sum_probs=118.1
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCC----cEEEEEcc
Q 029803 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDH----KINFIESE 79 (187)
Q Consensus 4 ~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~----~~~~~~~d 79 (187)
.+...+.+...+...++.+|||+|||+|..+..+++..+ ..+++++|+++.+++.+++++...++.. +++++++|
T Consensus 14 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 92 (217)
T 3jwh_A 14 NQQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSF-FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGA 92 (217)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTT-CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECC
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCC-CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCC
Confidence 344556666666777889999999999999999998655 5799999999999999999998777654 79999999
Q ss_pred hHHHHHHHhhcccCCCceeEEEEeCCCc-----ccHHHHHHHHhccCCCeEEEEeCCCCCccccC----CCCCCCCCccc
Q 029803 80 ALSVLDQLLKYSENEGSFDYAFVDADKD-----NYCNYHERLMKLLKVGGIAVYDNTLWGGTVAV----PEEQVPDHFRG 150 (187)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~D~i~~d~~~~-----~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~----~~~~~~~~~~~ 150 (187)
+... +. ..++||+|++..... ....+++++.++|+|||++++......+.... .......+...
T Consensus 93 ~~~~-~~------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (217)
T 3jwh_A 93 LTYQ-DK------RFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFE 165 (217)
T ss_dssp TTSC-CG------GGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSC
T ss_pred cccc-cc------cCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccc
Confidence 7432 11 136899999875322 34678999999999999888754321111000 00001111111
Q ss_pred chHHHHHHHHHHhhcCCCeEEEeeecCCc
Q 029803 151 SSRQAILDLNRSLADDPRVQLSHVALGDG 179 (187)
Q Consensus 151 ~~~~~~~~~~~~l~~~~~~~~~~lp~~~G 179 (187)
.....+++|.+.+....+|++...++++.
T Consensus 166 ~~~~~l~~~~~~~~~~~Gf~v~~~~~g~~ 194 (217)
T 3jwh_A 166 WTRSQFQNWANKITERFAYNVQFQPIGEA 194 (217)
T ss_dssp BCHHHHHHHHHHHHHHSSEEEEECCCSCC
T ss_pred cCHHHHHHHHHHHHHHcCceEEEEecCCc
Confidence 13455777888888888999998877653
No 22
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.76 E-value=7.7e-18 Score=123.87 Aligned_cols=119 Identities=18% Similarity=0.170 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029803 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 84 (187)
Q Consensus 5 ~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 84 (187)
......+...+...++.+|||+|||+|..+..++...+ ..+++++|+++++++.++++++..++ ++++++++|+.+.+
T Consensus 26 ~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~ 103 (204)
T 3e05_A 26 QEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMP-NGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEGL 103 (204)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCT-TSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTTC
T ss_pred HHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhhh
Confidence 34444444445566788999999999999999999875 78999999999999999999998887 57999999986643
Q ss_pred HHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 85 DQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
+. .++||+|+++........+++++.++|+|||.+++....
T Consensus 104 ~~-------~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 104 DD-------LPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp TT-------SCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred hc-------CCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEecc
Confidence 32 368999999876667889999999999999999996443
No 23
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.75 E-value=1.6e-17 Score=123.24 Aligned_cols=167 Identities=19% Similarity=0.132 Sum_probs=116.8
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCC----cEEEEEcch
Q 029803 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDH----KINFIESEA 80 (187)
Q Consensus 5 ~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~----~~~~~~~d~ 80 (187)
+...+.+..++...++.+|||||||+|..+..++...+ ..+++++|+++.+++.+++++...++.. +++++++|+
T Consensus 15 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 93 (219)
T 3jwg_A 15 QQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSL 93 (219)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTT-CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCS
T ss_pred HHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcc
Confidence 44455666666677899999999999999999998765 5799999999999999999988776654 799999998
Q ss_pred HHHHHHHhhcccCCCceeEEEEeCCCc-----ccHHHHHHHHhccCCCeEEEEeCCCCCccccCCCC----CCCCCcccc
Q 029803 81 LSVLDQLLKYSENEGSFDYAFVDADKD-----NYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEE----QVPDHFRGS 151 (187)
Q Consensus 81 ~~~~~~~~~~~~~~~~~D~i~~d~~~~-----~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~----~~~~~~~~~ 151 (187)
... +. ..++||+|++..... ....+++++.++|+|||+++.......+....... ....+....
T Consensus 94 ~~~-~~------~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (219)
T 3jwg_A 94 VYR-DK------RFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEW 166 (219)
T ss_dssp SSC-CG------GGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSB
T ss_pred ccc-cc------ccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeee
Confidence 432 11 136899999875322 23578999999999999887754332211110000 001111111
Q ss_pred hHHHHHHHHHHhhcCCCeEEEeeecCCc
Q 029803 152 SRQAILDLNRSLADDPRVQLSHVALGDG 179 (187)
Q Consensus 152 ~~~~~~~~~~~l~~~~~~~~~~lp~~~G 179 (187)
....+++|.+.+....+|++...+++++
T Consensus 167 ~~~~l~~~~~~l~~~~Gf~v~~~~~g~~ 194 (219)
T 3jwg_A 167 TRKEFQTWAVKVAEKYGYSVRFLQIGEI 194 (219)
T ss_dssp CHHHHHHHHHHHHHHHTEEEEEEEESCC
T ss_pred cHHHHHHHHHHHHHHCCcEEEEEecCCc
Confidence 3455777777777778899888876644
No 24
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.75 E-value=8.2e-17 Score=117.03 Aligned_cols=116 Identities=10% Similarity=0.106 Sum_probs=93.3
Q ss_pred HHHHHHHHH--cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHH
Q 029803 9 QLMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 86 (187)
Q Consensus 9 ~ll~~l~~~--~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 86 (187)
.++..+... .++.+|||+|||+|..+..++.. + ..+|+++|+++++++.++++++..++ .+++++++|+.+....
T Consensus 32 ~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~ 108 (189)
T 3p9n_A 32 SLFNIVTARRDLTGLAVLDLYAGSGALGLEALSR-G-AASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAA 108 (189)
T ss_dssp HHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHH
T ss_pred HHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHC-C-CCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhh
Confidence 344444433 57889999999999999988774 2 56899999999999999999999887 5799999999887654
Q ss_pred HhhcccCCCceeEEEEeCCCc----ccHHHHHHHHh--ccCCCeEEEEeCCC
Q 029803 87 LLKYSENEGSFDYAFVDADKD----NYCNYHERLMK--LLKVGGIAVYDNTL 132 (187)
Q Consensus 87 ~~~~~~~~~~~D~i~~d~~~~----~~~~~~~~~~~--~L~~gG~lv~~~~~ 132 (187)
+ ..++||+|+++.... .....++.+.+ +|+|||++++....
T Consensus 109 ~-----~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 109 G-----TTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp C-----CSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred c-----cCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 3 247899999986433 35677888888 99999999996543
No 25
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.75 E-value=1.8e-17 Score=126.76 Aligned_cols=116 Identities=16% Similarity=0.195 Sum_probs=93.2
Q ss_pred HHHHHHHH--HcCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHH
Q 029803 9 QLMAMLLR--LVNAKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD 85 (187)
Q Consensus 9 ~ll~~l~~--~~~~~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 85 (187)
+++..++. ..++.+|||+|||+|..+..+++.++ ++.+|+++|+++.+++.|+++++..+...+++++++|+.+.
T Consensus 58 ~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~-- 135 (261)
T 4gek_A 58 SMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDI-- 135 (261)
T ss_dssp HHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTC--
T ss_pred HHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccc--
Confidence 34444444 34678999999999999999998764 36799999999999999999999888888899999998653
Q ss_pred HHhhcccCCCceeEEEEeCCC-----cccHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 86 QLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 86 ~~~~~~~~~~~~D~i~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
..++||+|++...- .....+++++.+.|+|||++++.+...
T Consensus 136 -------~~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 136 -------AIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp -------CCCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred -------cccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 13679999987532 233467999999999999999876543
No 26
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.74 E-value=1e-17 Score=129.21 Aligned_cols=106 Identities=16% Similarity=0.219 Sum_probs=90.8
Q ss_pred HHHHcCCCEEEEEcccccHHH-HHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhccc
Q 029803 14 LLRLVNAKKTIEIGVFTGYSL-LLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSE 92 (187)
Q Consensus 14 l~~~~~~~~vLeiG~g~G~~~-~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 92 (187)
++...++.+|||||||+|..+ +.+++ .+ +++|+++|+++++++.|+++++..++ ++++++++|+.+. +
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~-~~-ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l-~------- 185 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSH-VY-GMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVI-D------- 185 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHH-TT-CCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGG-G-------
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHH-cc-CCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhC-C-------
Confidence 556788999999999998655 44554 44 78999999999999999999999898 7899999999763 2
Q ss_pred CCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCC
Q 029803 93 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 93 ~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.++||+||+++..+....+++++.+.|+|||.+++.+.
T Consensus 186 -d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 186 -GLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp -GCCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred -CCCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 37899999987777888999999999999999999763
No 27
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.74 E-value=5e-17 Score=127.34 Aligned_cols=151 Identities=13% Similarity=0.131 Sum_probs=107.8
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhc--C-C-CCcEEEEEcchHHHHHHHhhccc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--G-V-DHKINFIESEALSVLDQLLKYSE 92 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~-~-~~~~~~~~~d~~~~~~~~~~~~~ 92 (187)
..++++|||||||+|..+..+++..+ ..+++++|+++.+++.+++++... + + .++++++.+|+.+.++..
T Consensus 75 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~----- 148 (314)
T 1uir_A 75 HPEPKRVLIVGGGEGATLREVLKHPT-VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERT----- 148 (314)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHC-----
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhc-----
Confidence 45789999999999999999998654 689999999999999999998652 2 2 357999999998876542
Q ss_pred CCCceeEEEEeCCCcc----------cHHHHHHHHhccCCCeEEEEeCCCCCccccCCCCCCCCCcccchHHHHHHHHHH
Q 029803 93 NEGSFDYAFVDADKDN----------YCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRS 162 (187)
Q Consensus 93 ~~~~~D~i~~d~~~~~----------~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (187)
.++||+|++|..... ...+++.+.++|+|||++++..... ...... ....+.+.++.
T Consensus 149 -~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~----~~~~~~--------~~~~~~~~l~~ 215 (314)
T 1uir_A 149 -EERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMI----LLTHHR--------VHPVVHRTVRE 215 (314)
T ss_dssp -CCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEE----CC---C--------HHHHHHHHHHT
T ss_pred -CCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCc----cccCHH--------HHHHHHHHHHH
Confidence 478999999974433 4789999999999999999852110 000001 33334444444
Q ss_pred hhcCCCeEEEeeecCCc---eEEEEEc
Q 029803 163 LADDPRVQLSHVALGDG---ITICRRI 186 (187)
Q Consensus 163 l~~~~~~~~~~lp~~~G---~~~~~~~ 186 (187)
+-.+..+....+|..+| +.+++|.
T Consensus 216 ~F~~v~~~~~~vP~~~g~~~~~~as~~ 242 (314)
T 1uir_A 216 AFRYVRSYKNHIPGFFLNFGFLLASDA 242 (314)
T ss_dssp TCSEEEEEEEEEGGGTEEEEEEEEESS
T ss_pred HCCceEEEEEecCCCCCeEEEEEEECC
Confidence 43334445556676554 6667653
No 28
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.73 E-value=1.9e-17 Score=118.86 Aligned_cols=115 Identities=19% Similarity=0.172 Sum_probs=92.8
Q ss_pred HHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHh
Q 029803 9 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLL 88 (187)
Q Consensus 9 ~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 88 (187)
+.+...+...++.+|||+|||+|..+..++...+ +.+++++|+++.+++.+++++...++..++ ++++|+.+.++..
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~- 91 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSGSIAIEWLRSTP-QTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDV- 91 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSS-SEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGC-
T ss_pred HHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCC-CCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhcc-
Confidence 3333344456777999999999999999999876 789999999999999999999998887678 8888886544321
Q ss_pred hcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 89 KYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 89 ~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
.++||+|++...... ..+++++.+.|+|||.+++....
T Consensus 92 -----~~~~D~i~~~~~~~~-~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 92 -----PDNPDVIFIGGGLTA-PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp -----CSCCSEEEECC-TTC-TTHHHHHHHTCCTTCEEEEEECS
T ss_pred -----CCCCCEEEECCcccH-HHHHHHHHHhcCCCCEEEEEeec
Confidence 378999999865444 67899999999999999986544
No 29
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.73 E-value=1.8e-16 Score=122.35 Aligned_cols=148 Identities=11% Similarity=0.075 Sum_probs=106.4
Q ss_pred HHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhc--CC--------CCcEEEEEcchHHHHH
Q 029803 16 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--GV--------DHKINFIESEALSVLD 85 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~~--------~~~~~~~~~d~~~~~~ 85 (187)
...++++|||||||+|..+..+++. + ..+++++|+++.+++.|++++ .. ++ .++++++.+|+.+.++
T Consensus 72 ~~~~~~~VLdiG~G~G~~~~~l~~~-~-~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~ 148 (281)
T 1mjf_A 72 AHPKPKRVLVIGGGDGGTVREVLQH-D-VDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIK 148 (281)
T ss_dssp HSSCCCEEEEEECTTSHHHHHHTTS-C-CSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHH
T ss_pred hCCCCCeEEEEcCCcCHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhc
Confidence 3457899999999999999999987 5 789999999999999999998 43 32 4679999999988765
Q ss_pred HHhhcccCCCceeEEEEeCCC-----cc--cHHHHHHHHhccCCCeEEEEeCCCCCccccCCCCCCCCCcccchHHHHHH
Q 029803 86 QLLKYSENEGSFDYAFVDADK-----DN--YCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILD 158 (187)
Q Consensus 86 ~~~~~~~~~~~~D~i~~d~~~-----~~--~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (187)
. .++||+|++|... .. ...+++.+.++|+|||+++++...... . .. ....+.+
T Consensus 149 ~-------~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~-------~-----~~-~~~~~~~ 208 (281)
T 1mjf_A 149 N-------NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYL-------F-----TD-ELISAYK 208 (281)
T ss_dssp H-------CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTT-------S-----HH-HHHHHHH
T ss_pred c-------cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccc-------C-----HH-HHHHHHH
Confidence 4 2789999999742 11 477899999999999999986321000 0 00 2333444
Q ss_pred HHHHhhcCCCeEEEeeecCCc---eEEEEEc
Q 029803 159 LNRSLADDPRVQLSHVALGDG---ITICRRI 186 (187)
Q Consensus 159 ~~~~l~~~~~~~~~~lp~~~G---~~~~~~~ 186 (187)
..+.+-.+..+....+|..+| +.+++|.
T Consensus 209 ~l~~~f~~v~~~~~~vP~~~g~~~~~~as~~ 239 (281)
T 1mjf_A 209 EMKKVFDRVYYYSFPVIGYASPWAFLVGVKG 239 (281)
T ss_dssp HHHHHCSEEEEEEECCTTSSSSEEEEEEEES
T ss_pred HHHHHCCceEEEEEecCCCCceEEEEEeeCC
Confidence 455444444444555676544 7777764
No 30
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.73 E-value=1e-16 Score=115.94 Aligned_cols=102 Identities=14% Similarity=0.143 Sum_probs=82.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..+..+++. +.+|+++|+++++++.|+++++..++ .++++++++..+. ..+ ..++|
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l-~~~-----~~~~f 90 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENL-DHY-----VREPI 90 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGG-GGT-----CCSCE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHH-Hhh-----ccCCc
Confidence 46789999999999999999986 67999999999999999999998887 5799999776543 211 24789
Q ss_pred eEEEEeC-CC-----------cccHHHHHHHHhccCCCeEEEEe
Q 029803 98 DYAFVDA-DK-----------DNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 98 D~i~~d~-~~-----------~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
|+|+++. .. ......++++.++|+|||.+++.
T Consensus 91 D~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 134 (185)
T 3mti_A 91 RAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIM 134 (185)
T ss_dssp EEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEE
Confidence 9999872 11 22346788999999999999885
No 31
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.73 E-value=5.4e-17 Score=116.64 Aligned_cols=108 Identities=19% Similarity=0.223 Sum_probs=89.3
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++.+|||+|||+|..+..+++. + ..+++++|+++++++.+++++...++.++++++.+|+.+.++.. .++
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~------~~~ 100 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR-G-MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCL------TGR 100 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT-T-CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHB------CSC
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhh------cCC
Confidence 446789999999999999999886 3 57999999999999999999998888778999999998866543 467
Q ss_pred eeEEEEeCCC--cccHHHHHHHH--hccCCCeEEEEeCCC
Q 029803 97 FDYAFVDADK--DNYCNYHERLM--KLLKVGGIAVYDNTL 132 (187)
Q Consensus 97 ~D~i~~d~~~--~~~~~~~~~~~--~~L~~gG~lv~~~~~ 132 (187)
||+|+++... ......++.+. ++|+|||++++....
T Consensus 101 fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 101 FDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 9999998643 33455667776 899999999986443
No 32
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.72 E-value=2.5e-16 Score=118.73 Aligned_cols=105 Identities=15% Similarity=0.184 Sum_probs=88.3
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.++.+|||||||+|..+..++...+ +.+|+++|+++++++.++++++..++. +++++++|+.+..... ...++|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~----~~~~~f 142 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFP-HLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFGQRK----DVRESY 142 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHTTCT----TTTTCE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhcccc----cccCCc
Confidence 4678999999999999999997655 789999999999999999999988876 4999999997642100 013689
Q ss_pred eEEEEeCCCcccHHHHHHHHhccCCCeEEEEe
Q 029803 98 DYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 98 D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
|+|++.. ...+..+++.+.++|+|||++++.
T Consensus 143 D~V~~~~-~~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 143 DIVTARA-VARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp EEEEEEC-CSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred cEEEEec-cCCHHHHHHHHHHhcCCCCEEEEE
Confidence 9999987 456788999999999999999885
No 33
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.72 E-value=9.9e-17 Score=126.52 Aligned_cols=111 Identities=23% Similarity=0.406 Sum_probs=90.5
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhc--CC-CCcEEEEEcchHHHHHHHhhcccC
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--GV-DHKINFIESEALSVLDQLLKYSEN 93 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~~~~~~~~ 93 (187)
..++++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++... ++ ..+++++++|+.+.++.+ .
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~-~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~-----~ 191 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHAS-IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNA-----A 191 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTS-----C
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhc-----c
Confidence 35788999999999999999998754 689999999999999999998753 33 357999999998876543 1
Q ss_pred CCceeEEEEeCCCc----c---cHHHHHHHHhccCCCeEEEEe-CCCC
Q 029803 94 EGSFDYAFVDADKD----N---YCNYHERLMKLLKVGGIAVYD-NTLW 133 (187)
Q Consensus 94 ~~~~D~i~~d~~~~----~---~~~~~~~~~~~L~~gG~lv~~-~~~~ 133 (187)
.++||+|++|.... . ...+++.+.++|+|||+++++ +..|
T Consensus 192 ~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 239 (334)
T 1xj5_A 192 EGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLW 239 (334)
T ss_dssp TTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred CCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCcc
Confidence 36899999986421 1 478999999999999999996 4444
No 34
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.72 E-value=2.8e-16 Score=117.01 Aligned_cols=105 Identities=21% Similarity=0.295 Sum_probs=88.2
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 98 (187)
++.+|||||||+|.++..+|...+ +.+|+++|+++.+++.|++++...++.+ ++++++|+.+.++... ..++||
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p-~~~v~giD~s~~~l~~a~~~~~~~~l~n-v~~~~~Da~~~l~~~~----~~~~~d 107 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRP-EQDFLGIEVHSPGVGACLASAHEEGLSN-LRVMCHDAVEVLHKMI----PDNSLR 107 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHTTCSS-EEEECSCHHHHHHHHS----CTTCEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCC-CCeEEEEEecHHHHHHHHHHHHHhCCCc-EEEEECCHHHHHHHHc----CCCChh
Confidence 567999999999999999999877 7899999999999999999999888764 9999999998766532 357999
Q ss_pred EEEEeC---CCc--c------cHHHHHHHHhccCCCeEEEEe
Q 029803 99 YAFVDA---DKD--N------YCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 99 ~i~~d~---~~~--~------~~~~~~~~~~~L~~gG~lv~~ 129 (187)
.|++.. ++. . ...+++.+.++|+|||++++.
T Consensus 108 ~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~ 149 (218)
T 3dxy_A 108 MVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMA 149 (218)
T ss_dssp EEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEE
Confidence 999863 221 1 135899999999999999884
No 35
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.71 E-value=1.7e-16 Score=114.64 Aligned_cols=110 Identities=15% Similarity=0.154 Sum_probs=89.0
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..+..++.. + ..+|+++|+++.+++.+++++...++.++++++++|+.+..+.+.. ..++|
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~~~~f 117 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSR-G-MDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYE---EKLQF 117 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHH---TTCCE
T ss_pred cCCCCEEEeCCccCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHh---cCCCC
Confidence 46789999999999999988874 2 5799999999999999999999888777899999999886654321 14789
Q ss_pred eEEEEeCC--CcccHHHHHHH--HhccCCCeEEEEeCCC
Q 029803 98 DYAFVDAD--KDNYCNYHERL--MKLLKVGGIAVYDNTL 132 (187)
Q Consensus 98 D~i~~d~~--~~~~~~~~~~~--~~~L~~gG~lv~~~~~ 132 (187)
|+|+++.. .......++.+ .++|+|||++++....
T Consensus 118 D~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 118 DLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp EEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 99999864 23445666776 7899999999986433
No 36
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.71 E-value=2.7e-16 Score=121.01 Aligned_cols=107 Identities=16% Similarity=0.198 Sum_probs=88.4
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhc--CC-CCcEEEEEcchHHHHHHHhhcccC
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--GV-DHKINFIESEALSVLDQLLKYSEN 93 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~~~~~~~~ 93 (187)
..++++|||||||+|..+..+++..+ ..+|+++|+++++++.|++++... ++ .++++++.+|+.+.++..
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~------ 145 (275)
T 1iy9_A 73 HPNPEHVLVVGGGDGGVIREILKHPS-VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKS------ 145 (275)
T ss_dssp SSSCCEEEEESCTTCHHHHHHTTCTT-CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTC------
T ss_pred CCCCCEEEEECCchHHHHHHHHhCCC-CceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC------
Confidence 35789999999999999999988644 689999999999999999998642 33 368999999998876542
Q ss_pred CCceeEEEEeCCCcc-------cHHHHHHHHhccCCCeEEEEeC
Q 029803 94 EGSFDYAFVDADKDN-------YCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 94 ~~~~D~i~~d~~~~~-------~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.++||+|++|..... ...+++.+.+.|+|||++++..
T Consensus 146 ~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 146 ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 478999999864321 2679999999999999999963
No 37
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.70 E-value=3.7e-16 Score=112.99 Aligned_cols=117 Identities=20% Similarity=0.193 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029803 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 84 (187)
Q Consensus 5 ~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 84 (187)
......+...+...++.+|||+|||+|..+..++... .+++++|+++++++.+++++...+...++++.++|+.+.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 95 (192)
T 1l3i_A 19 MEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEAL 95 (192)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHH
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhc
Confidence 4445555555566788899999999999999998864 6999999999999999999998887667999999987744
Q ss_pred HHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCC
Q 029803 85 DQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
+. .++||+|+++........+++.+.++|+|||.+++...
T Consensus 96 ~~-------~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 96 CK-------IPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp TT-------SCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred cc-------CCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 32 25899999987666778899999999999999998643
No 38
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.70 E-value=1.6e-16 Score=115.99 Aligned_cols=108 Identities=11% Similarity=0.156 Sum_probs=89.7
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++.+|||+|||+|..+..+++.+.+.++++++|+++.+++.++++++..++..+++++++|+.+.... ..++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------~~~~ 93 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKY------IDCP 93 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGT------CCSC
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhh------ccCC
Confidence 4567899999999999999999987446799999999999999999999988877899999998664322 2478
Q ss_pred eeEEEEeCCC------------cccHHHHHHHHhccCCCeEEEEeC
Q 029803 97 FDYAFVDADK------------DNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 97 ~D~i~~d~~~------------~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
||+|+++... .....+++++.++|+|||.+++..
T Consensus 94 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 94 VKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp EEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 9999988521 123568999999999999998854
No 39
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.70 E-value=2.1e-16 Score=116.14 Aligned_cols=117 Identities=13% Similarity=0.121 Sum_probs=90.4
Q ss_pred HHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCC-CcEEEEEcchHHHHHHH
Q 029803 9 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD-HKINFIESEALSVLDQL 87 (187)
Q Consensus 9 ~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~~ 87 (187)
.++..+....++.+|||+|||+|..+..++... ..+|+++|+++++++.|+++++..++. .+++++++|+.+..+.+
T Consensus 43 ~l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 120 (201)
T 2ift_A 43 TLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQ--AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQP 120 (201)
T ss_dssp HHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSC
T ss_pred HHHHHHHHhcCCCeEEEcCCccCHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhh
Confidence 334444333478899999999999999877652 369999999999999999999988874 57999999998764321
Q ss_pred hhcccCCCc-eeEEEEeCC--CcccHHHHHHH--HhccCCCeEEEEeCCC
Q 029803 88 LKYSENEGS-FDYAFVDAD--KDNYCNYHERL--MKLLKVGGIAVYDNTL 132 (187)
Q Consensus 88 ~~~~~~~~~-~D~i~~d~~--~~~~~~~~~~~--~~~L~~gG~lv~~~~~ 132 (187)
..++ ||+|+++.. .......++.+ .++|+|||++++....
T Consensus 121 -----~~~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 121 -----QNQPHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp -----CSSCCEEEEEECCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred -----ccCCCCCEEEECCCCCCccHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 1367 999999865 33456677777 5689999999986544
No 40
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.70 E-value=4.1e-16 Score=127.53 Aligned_cols=119 Identities=16% Similarity=0.229 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHH
Q 029803 7 HGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 86 (187)
Q Consensus 7 ~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 86 (187)
...++..++...++.+|||+|||+|..+..++..++..++|+++|+++.+++.++++++.+++. ++++++|+.+....
T Consensus 89 ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~~ 166 (464)
T 3m6w_A 89 SAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAEA 166 (464)
T ss_dssp TTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHHH
T ss_pred HHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhhh
Confidence 3456666667778899999999999999999998875689999999999999999999999986 89999999876543
Q ss_pred HhhcccCCCceeEEEEeCCCc---------c----------------cHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 87 LLKYSENEGSFDYAFVDADKD---------N----------------YCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 87 ~~~~~~~~~~~D~i~~d~~~~---------~----------------~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
+ .++||+|++|+... . ...+++.+.++|+|||.|++..+.+
T Consensus 167 ~------~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 167 F------GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp H------CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred c------cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 3 47899999986421 1 1567888999999999999876554
No 41
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.70 E-value=6.3e-17 Score=121.88 Aligned_cols=116 Identities=18% Similarity=0.176 Sum_probs=90.9
Q ss_pred HHHHHHHH--HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHH
Q 029803 9 QLMAMLLR--LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 86 (187)
Q Consensus 9 ~ll~~l~~--~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 86 (187)
.++..++. ..++.+|||||||+|.++.++++..+ .++++||++|++++.|+++....+ .+++++.+|+.+....
T Consensus 48 ~~m~~~a~~~~~~G~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~--~~~~~~~~~a~~~~~~ 123 (236)
T 3orh_A 48 PYMHALAAAASSKGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPT 123 (236)
T ss_dssp HHHHHHHHHHTTTCEEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGG
T ss_pred HHHHHHHHhhccCCCeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCC--CceEEEeehHHhhccc
Confidence 34444444 24678999999999999999988643 589999999999999999987655 4688999999876554
Q ss_pred HhhcccCCCceeEEEEeCCC--------cccHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 87 LLKYSENEGSFDYAFVDADK--------DNYCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 87 ~~~~~~~~~~~D~i~~d~~~--------~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
+ ..++||.|+.|... .....+++++.++|||||++++.+...
T Consensus 124 ~-----~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~ 173 (236)
T 3orh_A 124 L-----PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTS 173 (236)
T ss_dssp S-----CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHH
T ss_pred c-----cccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEecCC
Confidence 3 35789999988532 234568899999999999999876443
No 42
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.70 E-value=4.2e-16 Score=121.14 Aligned_cols=106 Identities=17% Similarity=0.187 Sum_probs=86.6
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHh--cCC-CCcEEEEEcchHHHHHHHhhcccC
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKK--AGV-DHKINFIESEALSVLDQLLKYSEN 93 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~--~~~-~~~~~~~~~d~~~~~~~~~~~~~~ 93 (187)
..++++|||||||+|..+..+++..+ ..+|+++|+++.+++.+++++.. .++ .++++++++|+.+.++..
T Consensus 88 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------ 160 (296)
T 1inl_A 88 HPNPKKVLIIGGGDGGTLREVLKHDS-VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKF------ 160 (296)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTSTT-CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGC------
T ss_pred CCCCCEEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC------
Confidence 35778999999999999999998754 68999999999999999999864 233 357999999998765432
Q ss_pred CCceeEEEEeCCCc--------ccHHHHHHHHhccCCCeEEEEe
Q 029803 94 EGSFDYAFVDADKD--------NYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 94 ~~~~D~i~~d~~~~--------~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
.++||+|++|.... ....+++.+.++|+|||++++.
T Consensus 161 ~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 204 (296)
T 1inl_A 161 KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE 204 (296)
T ss_dssp SSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 46899999986432 2368899999999999999996
No 43
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.69 E-value=9.7e-16 Score=109.04 Aligned_cols=106 Identities=13% Similarity=0.128 Sum_probs=86.3
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 98 (187)
++.+|||+|||+|..+..++...+ +++++|+++++++.+++++...++ +++++++|+.+.++..... .++||
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~---~~~~D 112 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW---EAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQ---GERFT 112 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC---EEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHT---TCCEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhcc---CCceE
Confidence 788999999999999999998643 599999999999999999998876 6999999998866554211 34899
Q ss_pred EEEEeCCC-cccHHHHHHHH--hccCCCeEEEEeCCC
Q 029803 99 YAFVDADK-DNYCNYHERLM--KLLKVGGIAVYDNTL 132 (187)
Q Consensus 99 ~i~~d~~~-~~~~~~~~~~~--~~L~~gG~lv~~~~~ 132 (187)
+|+++... ......++.+. ++|+|||++++....
T Consensus 113 ~i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 113 VAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp EEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEEET
T ss_pred EEEECCCCchhHHHHHHHHHhhcccCCCcEEEEEeCC
Confidence 99998532 45556777777 999999999986443
No 44
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.69 E-value=1.4e-15 Score=116.96 Aligned_cols=121 Identities=21% Similarity=0.207 Sum_probs=97.1
Q ss_pred HHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHh
Q 029803 9 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLL 88 (187)
Q Consensus 9 ~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 88 (187)
.++..++...++.+|||+|||+|..+..++..++..++|+++|+++.+++.++++++..++. +++++++|+.+....+.
T Consensus 73 ~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~ 151 (274)
T 3ajd_A 73 MIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDYLL 151 (274)
T ss_dssp GHHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHH
T ss_pred HHHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchhhh
Confidence 45555666678889999999999999999998763489999999999999999999998876 69999999987644321
Q ss_pred hcccCCCceeEEEEeCCC---------------------cccHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 89 KYSENEGSFDYAFVDADK---------------------DNYCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 89 ~~~~~~~~~D~i~~d~~~---------------------~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
. ..++||+|++|... .....+++.+.++|+|||.+++.....
T Consensus 152 ~---~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 152 K---NEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp H---TTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred h---ccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 1 13689999999432 223678899999999999999975543
No 45
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.69 E-value=6.1e-16 Score=126.34 Aligned_cols=121 Identities=16% Similarity=0.182 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHH
Q 029803 6 IHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD 85 (187)
Q Consensus 6 ~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 85 (187)
....++..++...++.+|||+|||+|..++.+|..++..++|+++|+++.+++.+++|++.+++. ++.++++|+.+...
T Consensus 92 ~ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~-nv~v~~~Da~~l~~ 170 (456)
T 3m4x_A 92 PSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS-NAIVTNHAPAELVP 170 (456)
T ss_dssp TTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS-SEEEECCCHHHHHH
T ss_pred HHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEeCCHHHhhh
Confidence 33456666777778899999999999999999988765689999999999999999999999986 59999999987654
Q ss_pred HHhhcccCCCceeEEEEeCCCcc-------------------------cHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 86 QLLKYSENEGSFDYAFVDADKDN-------------------------YCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 86 ~~~~~~~~~~~~D~i~~d~~~~~-------------------------~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
.+ .++||+|++|+.... ...+++.+.++|+|||.|++..+..
T Consensus 171 ~~------~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 171 HF------SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp HH------TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred hc------cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 33 478999999964211 1267888899999999999876654
No 46
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.68 E-value=1.5e-15 Score=119.20 Aligned_cols=106 Identities=19% Similarity=0.292 Sum_probs=87.7
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhc--CC-CCcEEEEEcchHHHHHHHhhcccC
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--GV-DHKINFIESEALSVLDQLLKYSEN 93 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~~~~~~~~ 93 (187)
..++++|||||||+|..+..+++..+ ..+++++|+++++++.+++++... ++ .++++++++|+.+.++..
T Consensus 114 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------ 186 (321)
T 2pt6_A 114 SKEPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV------ 186 (321)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC------
T ss_pred CCCCCEEEEEcCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhc------
Confidence 45788999999999999999998654 689999999999999999998652 23 357999999998876542
Q ss_pred CCceeEEEEeCCCc-----c-c-HHHHHHHHhccCCCeEEEEe
Q 029803 94 EGSFDYAFVDADKD-----N-Y-CNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 94 ~~~~D~i~~d~~~~-----~-~-~~~~~~~~~~L~~gG~lv~~ 129 (187)
.++||+|++|.... . + ..+++.+.+.|+|||++++.
T Consensus 187 ~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 229 (321)
T 2pt6_A 187 TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 229 (321)
T ss_dssp CSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 47899999986311 1 2 68899999999999999996
No 47
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.68 E-value=4.9e-16 Score=121.18 Aligned_cols=107 Identities=15% Similarity=0.134 Sum_probs=88.0
Q ss_pred HcCCC--EEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 17 LVNAK--KTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 17 ~~~~~--~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
...++ +|||||||+|..+.++++.++ +.+++++|+++.+++.+++++.... ..+++++++|+.+++..+ ..
T Consensus 85 ~p~p~~~rVLdIG~G~G~la~~la~~~p-~~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~~Da~~~l~~~-----~~ 157 (317)
T 3gjy_A 85 HQDASKLRITHLGGGACTMARYFADVYP-QSRNTVVELDAELARLSREWFDIPR-APRVKIRVDDARMVAESF-----TP 157 (317)
T ss_dssp HSCGGGCEEEEESCGGGHHHHHHHHHST-TCEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEESCHHHHHHTC-----CT
T ss_pred CCCCCCCEEEEEECCcCHHHHHHHHHCC-CcEEEEEECCHHHHHHHHHhccccC-CCceEEEECcHHHHHhhc-----cC
Confidence 34445 999999999999999999776 6799999999999999999985432 458999999999887643 24
Q ss_pred CceeEEEEeCCCc-------ccHHHHHHHHhccCCCeEEEEeC
Q 029803 95 GSFDYAFVDADKD-------NYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 95 ~~~D~i~~d~~~~-------~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
++||+|++|.... ....+++.+.++|+|||++++..
T Consensus 158 ~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 158 ASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp TCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 6899999985321 13689999999999999999864
No 48
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.68 E-value=6.9e-16 Score=113.49 Aligned_cols=105 Identities=14% Similarity=0.109 Sum_probs=85.2
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..++.++... ..+|+++|+++++++.++++++..++ .+++++++|+.+.++. ..++|
T Consensus 53 ~~~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~------~~~~f 123 (202)
T 2fpo_A 53 IVDAQCLDCFAGSGALGLEALSRY--AAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQ------KGTPH 123 (202)
T ss_dssp HTTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSS------CCCCE
T ss_pred cCCCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhh------cCCCC
Confidence 478899999999999999877653 35999999999999999999998887 5799999999876543 14689
Q ss_pred eEEEEeCC--CcccHHHHHHHHh--ccCCCeEEEEeCC
Q 029803 98 DYAFVDAD--KDNYCNYHERLMK--LLKVGGIAVYDNT 131 (187)
Q Consensus 98 D~i~~d~~--~~~~~~~~~~~~~--~L~~gG~lv~~~~ 131 (187)
|+|+++.. .......++.+.+ +|+|||++++...
T Consensus 124 D~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 124 NIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp EEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CEEEECCCCCCCcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 99999865 2345567777755 5999999988643
No 49
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.68 E-value=2.5e-16 Score=122.28 Aligned_cols=107 Identities=19% Similarity=0.226 Sum_probs=85.3
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcC---C-CCcEEEEEcchHHHHHHHhhccc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG---V-DHKINFIESEALSVLDQLLKYSE 92 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~---~-~~~~~~~~~d~~~~~~~~~~~~~ 92 (187)
..++++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+ + ..+++++.+|+.+.++.
T Consensus 81 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~------ 153 (294)
T 3adn_A 81 HGHAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ------ 153 (294)
T ss_dssp STTCCEEEEESCTTCHHHHHHHTCTT-CCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---C------
T ss_pred CCCCCEEEEEeCChhHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhh------
Confidence 45789999999999999999998644 6899999999999999999987642 2 35799999999877653
Q ss_pred CCCceeEEEEeCCCc-------ccHHHHHHHHhccCCCeEEEEeC
Q 029803 93 NEGSFDYAFVDADKD-------NYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 93 ~~~~~D~i~~d~~~~-------~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
..++||+|++|.... ....+++.+.+.|+|||++++..
T Consensus 154 ~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 154 TSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CCCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 247899999986422 12679999999999999999853
No 50
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.68 E-value=1.3e-15 Score=111.90 Aligned_cols=114 Identities=15% Similarity=0.175 Sum_probs=92.9
Q ss_pred HHHHHHHHHH-HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHH
Q 029803 7 HGQLMAMLLR-LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD 85 (187)
Q Consensus 7 ~~~ll~~l~~-~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 85 (187)
...++..+.. ..++.+|||+|||+|..+..+++. + ..+++++|+++.+++.+++++...+..+ +++.++|+.+.
T Consensus 47 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~-- 121 (205)
T 3grz_A 47 TQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKL-G-AKSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLAD-- 121 (205)
T ss_dssp HHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTT--
T ss_pred HHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEecccccc--
Confidence 3344455444 346789999999999999998874 3 5699999999999999999999888776 99999998653
Q ss_pred HHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 86 QLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 86 ~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
..++||+|+++........+++++.++|+|||.+++.+..
T Consensus 122 -------~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 161 (205)
T 3grz_A 122 -------VDGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSGID 161 (205)
T ss_dssp -------CCSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEEEE
T ss_pred -------CCCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEecC
Confidence 1478999999876666777888899999999999986443
No 51
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.68 E-value=1.7e-16 Score=120.93 Aligned_cols=114 Identities=18% Similarity=0.206 Sum_probs=94.0
Q ss_pred HHHHHHHHHHc-CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHH
Q 029803 8 GQLMAMLLRLV-NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 86 (187)
Q Consensus 8 ~~ll~~l~~~~-~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 86 (187)
+.++..++... ++.+|||+|||+|..++.++...+ .+|+++|+++.+++.|++++..+++.++++++++|+.+....
T Consensus 37 ~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~ 114 (259)
T 3lpm_A 37 AVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDL 114 (259)
T ss_dssp HHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGT
T ss_pred HHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhh
Confidence 45666666666 788999999999999999998754 499999999999999999999999988899999999876432
Q ss_pred HhhcccCCCceeEEEEeCCC-----------------------cccHHHHHHHHhccCCCeEEEE
Q 029803 87 LLKYSENEGSFDYAFVDADK-----------------------DNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 87 ~~~~~~~~~~~D~i~~d~~~-----------------------~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
+ ..++||+|+++... .....+++.+.++|+|||.+++
T Consensus 115 ~-----~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 174 (259)
T 3lpm_A 115 I-----PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF 174 (259)
T ss_dssp S-----CTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred h-----ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE
Confidence 2 24789999997421 1234688999999999999998
No 52
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.68 E-value=2.6e-16 Score=114.00 Aligned_cols=113 Identities=15% Similarity=0.147 Sum_probs=90.9
Q ss_pred HHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCC-cEEEEEcchHHHHHHH
Q 029803 9 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDH-KINFIESEALSVLDQL 87 (187)
Q Consensus 9 ~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~-~~~~~~~d~~~~~~~~ 87 (187)
+.+...+...++.+|||+|||+|..+..++.. ..+++++|+++.+++.+++++...++.+ +++++.+|+.+..+
T Consensus 42 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~-- 116 (194)
T 1dus_A 42 KILVENVVVDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK-- 116 (194)
T ss_dssp HHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--
T ss_pred HHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc--
Confidence 33333344557789999999999999999886 5799999999999999999999888764 59999999876322
Q ss_pred hhcccCCCceeEEEEeCCC----cccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 88 LKYSENEGSFDYAFVDADK----DNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 88 ~~~~~~~~~~D~i~~d~~~----~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
.++||+|+++... .....+++.+.++|+|||.+++....
T Consensus 117 ------~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 117 ------DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp ------TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred ------cCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 3689999998642 33567889999999999999986443
No 53
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.68 E-value=1.8e-16 Score=120.11 Aligned_cols=114 Identities=21% Similarity=0.282 Sum_probs=93.4
Q ss_pred HHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhh
Q 029803 10 LMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLK 89 (187)
Q Consensus 10 ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 89 (187)
.+...+...++.+|||||||+|..+..++... +.+++++|+++.+++.+++++...++.+++++.++|+.+..
T Consensus 27 ~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~----- 99 (256)
T 1nkv_A 27 TLGRVLRMKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV----- 99 (256)
T ss_dssp HHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC-----
T ss_pred HHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCC-----
Confidence 33333445677899999999999999999876 46999999999999999999998888778999999987531
Q ss_pred cccCCCceeEEEEeCC---CcccHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 90 YSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 90 ~~~~~~~~D~i~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
..++||+|++... ..+...+++++.++|+|||.+++.+..+
T Consensus 100 ---~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (256)
T 1nkv_A 100 ---ANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYW 143 (256)
T ss_dssp ---CSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEE
T ss_pred ---cCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcc
Confidence 1378999998643 2356788999999999999999976544
No 54
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.68 E-value=7.8e-16 Score=119.65 Aligned_cols=116 Identities=8% Similarity=0.068 Sum_probs=95.5
Q ss_pred HHHHHHHHHHH---cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029803 7 HGQLMAMLLRL---VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 83 (187)
Q Consensus 7 ~~~ll~~l~~~---~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 83 (187)
....+..++.. .++.+|||||||+|..+..+++..+ .+|+++|+++++++.+++++...++..++++..+|+.+.
T Consensus 57 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 134 (302)
T 3hem_A 57 QYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF 134 (302)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC
T ss_pred HHHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc
Confidence 33444455543 4677999999999999999998764 699999999999999999999999888899999998654
Q ss_pred HHHHhhcccCCCceeEEEEeCCC------------cccHHHHHHHHhccCCCeEEEEeCCCCC
Q 029803 84 LDQLLKYSENEGSFDYAFVDADK------------DNYCNYHERLMKLLKVGGIAVYDNTLWG 134 (187)
Q Consensus 84 ~~~~~~~~~~~~~~D~i~~d~~~------------~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
.++||+|++.... ..+..+++++.++|+|||.+++.+....
T Consensus 135 ----------~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 135 ----------DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp ----------CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred ----------CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 3799999987432 3347899999999999999999876543
No 55
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.67 E-value=6.1e-15 Score=116.27 Aligned_cols=109 Identities=16% Similarity=0.234 Sum_probs=89.0
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCC-cEEEEEcchHHHHHHHhhcccCCCc
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDH-KINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
.++.+|||+|||+|..++.++.. +.+|+++|+++.+++.+++|++.+++.+ +++++++|+.+.++..... .++
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~---ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~---~~~ 225 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAA---GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERR---GST 225 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT---TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHH---TCC
T ss_pred CCCCcEEEcccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhc---CCC
Confidence 45679999999999999999985 4599999999999999999999988875 5999999999876543211 368
Q ss_pred eeEEEEeCCC-------------cccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 97 FDYAFVDADK-------------DNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 97 ~D~i~~d~~~-------------~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
||+|++|... ..+..+++.+.++|+|||++++....
T Consensus 226 fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 226 YDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp BSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred ceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 9999998642 12467888899999999997775433
No 56
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.67 E-value=5.2e-16 Score=121.61 Aligned_cols=121 Identities=21% Similarity=0.249 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029803 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 84 (187)
Q Consensus 5 ~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 84 (187)
.....++..++...++.+|||+|||+|..+..++..++..++|+++|+++.+++.++++++..++. +++++++|+.+..
T Consensus 104 d~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~~ 182 (315)
T 1ixk_A 104 EASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-NVILFHSSSLHIG 182 (315)
T ss_dssp CHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-SEEEESSCGGGGG
T ss_pred CHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-eEEEEECChhhcc
Confidence 344556666677778889999999999999999998765689999999999999999999998876 5999999987642
Q ss_pred HHHhhcccCCCceeEEEEeCCCcc-------------------------cHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 85 DQLLKYSENEGSFDYAFVDADKDN-------------------------YCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~i~~d~~~~~-------------------------~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
. . .++||+|++|..... ...+++++.++|||||.+++.....
T Consensus 183 ~-~------~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 183 E-L------NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp G-G------CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred c-c------cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 2 1 468999999853211 1467889999999999999976543
No 57
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.67 E-value=1.5e-16 Score=120.77 Aligned_cols=116 Identities=20% Similarity=0.246 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029803 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 84 (187)
Q Consensus 5 ~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 84 (187)
+.....+...+...++.+|||+|||+|..+..++..+.+..+++++|+++++++.|+++++..++.++++++++|+.+.+
T Consensus 79 ~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 158 (255)
T 3mb5_A 79 PKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGI 158 (255)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCC
T ss_pred HhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhcc
Confidence 34445555566677889999999999999999999854478999999999999999999999998878999999997542
Q ss_pred HHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 85 DQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
..++||+|+++. .....+++++.+.|+|||.+++..
T Consensus 159 --------~~~~~D~v~~~~--~~~~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 159 --------EEENVDHVILDL--PQPERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp --------CCCSEEEEEECS--SCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred --------CCCCcCEEEECC--CCHHHHHHHHHHHcCCCCEEEEEE
Confidence 246899999974 344578899999999999999853
No 58
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.67 E-value=1.1e-16 Score=121.34 Aligned_cols=116 Identities=22% Similarity=0.263 Sum_probs=94.8
Q ss_pred HHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHh
Q 029803 9 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLL 88 (187)
Q Consensus 9 ~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 88 (187)
.++..+....++.+|||||||+|..+..++...+ .+|+++|+++.+++.+++++...++.++++++++|+.+. +
T Consensus 36 ~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~--- 109 (257)
T 3f4k_A 36 KAVSFINELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNL-P--- 109 (257)
T ss_dssp HHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-S---
T ss_pred HHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhC-C---
Confidence 3344333455678999999999999999999875 499999999999999999999999888899999998543 1
Q ss_pred hcccCCCceeEEEEeCC--CcccHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 89 KYSENEGSFDYAFVDAD--KDNYCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 89 ~~~~~~~~~D~i~~d~~--~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
...++||+|++... +-....+++.+.++|+|||++++.+..+
T Consensus 110 ---~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 153 (257)
T 3f4k_A 110 ---FQNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEASW 153 (257)
T ss_dssp ---SCTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred ---CCCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEeec
Confidence 12479999998753 2256788999999999999999987543
No 59
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.67 E-value=1.2e-16 Score=122.03 Aligned_cols=118 Identities=14% Similarity=0.185 Sum_probs=93.3
Q ss_pred HHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHh---cCCCCcEEEEEcchHHHHHH
Q 029803 10 LMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKK---AGVDHKINFIESEALSVLDQ 86 (187)
Q Consensus 10 ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~---~~~~~~~~~~~~d~~~~~~~ 86 (187)
+|..++...++.+|||+|||+|..++.++...+ ..+|+++|+++++++.|++++.. +++.++++++++|+.+..+.
T Consensus 27 lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~ 105 (260)
T 2ozv_A 27 LLASLVADDRACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKA 105 (260)
T ss_dssp HHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHH
T ss_pred HHHHHhcccCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhh
Confidence 445555555778999999999999999999876 78999999999999999999988 78777899999999776432
Q ss_pred HhhcccCCCceeEEEEeCCC---------------------cccHHHHHHHHhccCCCeEEEE
Q 029803 87 LLKYSENEGSFDYAFVDADK---------------------DNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 87 ~~~~~~~~~~~D~i~~d~~~---------------------~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
........++||+|+++... ..+..+++.+.++|+|||.+++
T Consensus 106 ~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 168 (260)
T 2ozv_A 106 RVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSL 168 (260)
T ss_dssp HHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEE
T ss_pred hhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEE
Confidence 21110124689999998321 1256788999999999999987
No 60
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.67 E-value=3.9e-15 Score=106.84 Aligned_cols=112 Identities=21% Similarity=0.132 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029803 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 84 (187)
Q Consensus 5 ~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 84 (187)
+.....+...+...++.+|||+|||+|..+..++. + ..+++++|+++.+++.+++++...++. +++++++|+.+.+
T Consensus 21 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~--~-~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~ 96 (183)
T 2yxd_A 21 EEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK--R-CKFVYAIDYLDGAIEVTKQNLAKFNIK-NCQIIKGRAEDVL 96 (183)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT--T-SSEEEEEECSHHHHHHHHHHHHHTTCC-SEEEEESCHHHHG
T ss_pred HHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh--c-CCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEECCccccc
Confidence 33444455555566788999999999999999988 3 789999999999999999999988874 6999999998732
Q ss_pred HHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCC
Q 029803 85 DQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
+ .++||+|+++.. .....+++.+.++ |||.+++...
T Consensus 97 ~--------~~~~D~i~~~~~-~~~~~~l~~~~~~--~gG~l~~~~~ 132 (183)
T 2yxd_A 97 D--------KLEFNKAFIGGT-KNIEKIIEILDKK--KINHIVANTI 132 (183)
T ss_dssp G--------GCCCSEEEECSC-SCHHHHHHHHHHT--TCCEEEEEES
T ss_pred c--------CCCCcEEEECCc-ccHHHHHHHHhhC--CCCEEEEEec
Confidence 2 268999999876 6778888888888 9999998643
No 61
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.67 E-value=7.5e-16 Score=114.11 Aligned_cols=112 Identities=18% Similarity=0.261 Sum_probs=92.5
Q ss_pred HHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 15 LRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 15 ~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
+...++.+|||+|||+|..+..+++..++..+++++|+++.+++.+++++...++. +++++.+|+.+.. ...
T Consensus 33 ~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~-------~~~ 104 (219)
T 3dh0_A 33 FGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIP-------LPD 104 (219)
T ss_dssp HTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCS-------SCS
T ss_pred hCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCC-------CCC
Confidence 34567789999999999999999998744789999999999999999999988876 6999999986531 124
Q ss_pred CceeEEEEeCC---CcccHHHHHHHHhccCCCeEEEEeCCCCC
Q 029803 95 GSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLWG 134 (187)
Q Consensus 95 ~~~D~i~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
++||+|++... ..+...+++++.++|+|||.+++.+....
T Consensus 105 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 147 (219)
T 3dh0_A 105 NTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKE 147 (219)
T ss_dssp SCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred CCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEeccc
Confidence 78999998753 23457899999999999999999765543
No 62
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.67 E-value=2.6e-16 Score=116.16 Aligned_cols=116 Identities=18% Similarity=0.263 Sum_probs=93.3
Q ss_pred HHHHHHHHHc--CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHH
Q 029803 9 QLMAMLLRLV--NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 86 (187)
Q Consensus 9 ~ll~~l~~~~--~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 86 (187)
.+...++... ++.+|||+|||+|..+..++.. + +.+++++|+++.+++.+++++...++.++++++++|+.+. +
T Consensus 31 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~- 106 (219)
T 3dlc_A 31 IIAENIINRFGITAGTCIDIGSGPGALSIALAKQ-S-DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNI-P- 106 (219)
T ss_dssp HHHHHHHHHHCCCEEEEEEETCTTSHHHHHHHHH-S-EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBC-S-
T ss_pred HHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHc-C-CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHC-C-
Confidence 3444444432 3349999999999999999987 4 6899999999999999999999988887899999998652 1
Q ss_pred HhhcccCCCceeEEEEeCC---CcccHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 87 LLKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 87 ~~~~~~~~~~~D~i~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
...++||+|++... ......+++++.++|+|||.+++.+.+.
T Consensus 107 -----~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 107 -----IEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp -----SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred -----CCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 12478999999853 2455789999999999999999976553
No 63
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.67 E-value=7.5e-15 Score=111.66 Aligned_cols=113 Identities=20% Similarity=0.265 Sum_probs=91.7
Q ss_pred HHHHHHHHHH-HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHH
Q 029803 7 HGQLMAMLLR-LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD 85 (187)
Q Consensus 7 ~~~ll~~l~~-~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 85 (187)
+..++..+.. ..++.+|||+|||+|..+..+++. +.+|+++|+++.+++.+++++..+++. +++.++|..+.++
T Consensus 107 t~~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~---g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~~~ 181 (254)
T 2nxc_A 107 TRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKL---GGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAALP 181 (254)
T ss_dssp HHHHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHHGG
T ss_pred HHHHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHh---CCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhcCc
Confidence 3444444443 356789999999999999998875 339999999999999999999988765 8999999877532
Q ss_pred HHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 86 QLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 86 ~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
.++||+|+++........+++.+.++|+|||++++....
T Consensus 182 --------~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 182 --------FGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp --------GCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred --------CCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEeec
Confidence 368999999865556678899999999999999996544
No 64
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.66 E-value=5.1e-16 Score=117.85 Aligned_cols=104 Identities=19% Similarity=0.278 Sum_probs=88.1
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 98 (187)
++.+|||||||+|..++.++...+ +.+|+++|+++.+++.++++++..++.+ ++++++|+.+..... ...++||
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~l~~-v~~~~~d~~~~~~~~----~~~~~fD 153 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRP-ELELVLVDATRKKVAFVERAIEVLGLKG-ARALWGRAEVLAREA----GHREAYA 153 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCSS-EEEEECCHHHHTTST----TTTTCEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCCc-eEEEECcHHHhhccc----ccCCCce
Confidence 567999999999999999998876 7899999999999999999999999875 999999997753210 0137899
Q ss_pred EEEEeCCCcccHHHHHHHHhccCCCeEEEEe
Q 029803 99 YAFVDADKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 99 ~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+|++... .....+++.+.++|+|||.+++-
T Consensus 154 ~I~s~a~-~~~~~ll~~~~~~LkpgG~l~~~ 183 (249)
T 3g89_A 154 RAVARAV-APLCVLSELLLPFLEVGGAAVAM 183 (249)
T ss_dssp EEEEESS-CCHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEECCc-CCHHHHHHHHHHHcCCCeEEEEE
Confidence 9999753 45678899999999999998873
No 65
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.66 E-value=3.1e-15 Score=115.00 Aligned_cols=116 Identities=18% Similarity=0.216 Sum_probs=94.9
Q ss_pred cHHHHHHHHHHHHH--cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchH
Q 029803 4 LTIHGQLMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEAL 81 (187)
Q Consensus 4 ~~~~~~ll~~l~~~--~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 81 (187)
.+.+..++..++.. .++.+|||+|||+|..+..++...+ ..+++++|+++.+++.+++++...++. +++++++|..
T Consensus 92 r~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~~ 169 (276)
T 2b3t_A 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERP-DCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWF 169 (276)
T ss_dssp CTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCT-TSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCSTT
T ss_pred CchHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcchh
Confidence 34556666666665 4678999999999999999998876 789999999999999999999988876 6999999987
Q ss_pred HHHHHHhhcccCCCceeEEEEeCCC----------------------------cccHHHHHHHHhccCCCeEEEEe
Q 029803 82 SVLDQLLKYSENEGSFDYAFVDADK----------------------------DNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 82 ~~~~~~~~~~~~~~~~D~i~~d~~~----------------------------~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+.++ .++||+|+++... ..+..+++.+.+.|+|||++++.
T Consensus 170 ~~~~--------~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 170 SALA--------GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp GGGT--------TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hhcc--------cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 6422 3689999997421 23466788899999999999986
No 66
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.66 E-value=1.5e-15 Score=111.77 Aligned_cols=120 Identities=13% Similarity=0.186 Sum_probs=75.8
Q ss_pred cHHHHHHHHHHHHH----cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcc
Q 029803 4 LTIHGQLMAMLLRL----VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESE 79 (187)
Q Consensus 4 ~~~~~~ll~~l~~~----~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d 79 (187)
.+.+..++..+... .++.+|||+|||+|..+..+++..+ +.+++++|+++.+++.+++++...+. +++++++|
T Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d 87 (215)
T 4dzr_A 11 RPDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACP-GVSVTAVDLSMDALAVARRNAERFGA--VVDWAAAD 87 (215)
T ss_dssp CHHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCT-TEEEEEEECC---------------------CCHHH
T ss_pred CccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcc
Confidence 34556666666654 5778999999999999999999876 78999999999999999999987776 68999999
Q ss_pred hHHHHHHHhhcccCCCceeEEEEeCCCc-----------------------------ccHHHHHHHHhccCCCeE-EEEe
Q 029803 80 ALSVLDQLLKYSENEGSFDYAFVDADKD-----------------------------NYCNYHERLMKLLKVGGI-AVYD 129 (187)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~D~i~~d~~~~-----------------------------~~~~~~~~~~~~L~~gG~-lv~~ 129 (187)
+.+.++.... ..++||+|+++.... .+..+++.+.++|+|||+ +++.
T Consensus 88 ~~~~~~~~~~---~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 164 (215)
T 4dzr_A 88 GIEWLIERAE---RGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLE 164 (215)
T ss_dssp HHHHHHHHHH---TTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEE
T ss_pred hHhhhhhhhh---ccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 9885543111 137999999963210 015677778899999999 5553
No 67
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.66 E-value=1.2e-16 Score=122.15 Aligned_cols=108 Identities=19% Similarity=0.215 Sum_probs=91.5
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++.+|||||||+|..+..++.. + ..+|+++|+++.+++.+++++...++.++++++++|+.+. + ...++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~------~~~~~ 114 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH-V-TGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDL-P------FRNEE 114 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT-C-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-C------CCTTC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhC-C------CCCCC
Confidence 456789999999999999999987 3 6799999999999999999999999888899999998653 1 12478
Q ss_pred eeEEEEeCCC--cccHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 97 FDYAFVDADK--DNYCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 97 ~D~i~~d~~~--~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
||+|++.... -....+++++.++|+|||++++.+..+
T Consensus 115 fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 153 (267)
T 3kkz_A 115 LDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSECSW 153 (267)
T ss_dssp EEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEEEE
T ss_pred EEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEeee
Confidence 9999987532 256778999999999999999987654
No 68
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.66 E-value=6.2e-15 Score=113.87 Aligned_cols=107 Identities=18% Similarity=0.265 Sum_probs=88.0
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcC--C-CCcEEEEEcchHHHHHHHhhcccC
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG--V-DHKINFIESEALSVLDQLLKYSEN 93 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~--~-~~~~~~~~~d~~~~~~~~~~~~~~ 93 (187)
..++++|||||||+|..+..+++..+ ..+++++|+++.+++.+++++...+ + .++++++.+|+.+.++..
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------ 148 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV------ 148 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC------
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhC------
Confidence 35788999999999999999998654 6899999999999999999886532 2 357999999998876542
Q ss_pred CCceeEEEEeCCCc-----c-c-HHHHHHHHhccCCCeEEEEeC
Q 029803 94 EGSFDYAFVDADKD-----N-Y-CNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 94 ~~~~D~i~~d~~~~-----~-~-~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.++||+|++|.... . + ..+++.+.+.|+|||++++..
T Consensus 149 ~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 149 TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp CSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 47899999986321 1 1 689999999999999999863
No 69
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.66 E-value=7.5e-16 Score=114.80 Aligned_cols=113 Identities=11% Similarity=0.103 Sum_probs=91.9
Q ss_pred HHHHHHHc-CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhh
Q 029803 11 MAMLLRLV-NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLK 89 (187)
Q Consensus 11 l~~l~~~~-~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 89 (187)
|+.+.... ++.+|+|||||+|+.++.++...+ ..+|+++|+++.+++.|++|++.+++.+++++..+|..+.++.
T Consensus 6 L~~l~~~v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~--- 81 (225)
T 3kr9_A 6 LELVASFVSQGAILLDVGSDHAYLPIELVERGQ-IKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE--- 81 (225)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG---
T ss_pred HHHHHHhCCCCCEEEEeCCCcHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc---
Confidence 44455544 456899999999999999998755 6799999999999999999999999988999999999764332
Q ss_pred cccCCCceeEEEEeC-CCcccHHHHHHHHhccCCCeEEEEeCC
Q 029803 90 YSENEGSFDYAFVDA-DKDNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 90 ~~~~~~~~D~i~~d~-~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
..+||+|++.+ .......+++.+.+.|+++|.+++...
T Consensus 82 ----~~~~D~IviaG~Gg~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 82 ----TDQVSVITIAGMGGRLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp ----GGCCCEEEEEEECHHHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred ----CcCCCEEEEcCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 13699998764 223357788888999999999999644
No 70
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.66 E-value=3.5e-15 Score=121.53 Aligned_cols=159 Identities=18% Similarity=0.206 Sum_probs=117.0
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029803 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 83 (187)
Q Consensus 4 ~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 83 (187)
+.....++..++...++.+|||+|||+|..+..++...+ +++|+++|+++.+++.+++++...++. ++++++|+.+.
T Consensus 231 qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~-~~~v~a~D~~~~~l~~~~~~~~~~g~~--~~~~~~D~~~~ 307 (429)
T 1sqg_A 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMK--ATVKQGDGRYP 307 (429)
T ss_dssp CCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCT-TCEEEEEESSTTTHHHHHHHHHHTTCC--CEEEECCTTCT
T ss_pred eCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHHcCCC--eEEEeCchhhc
Confidence 345566677777777889999999999999999999886 589999999999999999999988873 78999998765
Q ss_pred HHHHhhcccCCCceeEEEEeCCCcc-------------------------cHHHHHHHHhccCCCeEEEEeCCCCCcccc
Q 029803 84 LDQLLKYSENEGSFDYAFVDADKDN-------------------------YCNYHERLMKLLKVGGIAVYDNTLWGGTVA 138 (187)
Q Consensus 84 ~~~~~~~~~~~~~~D~i~~d~~~~~-------------------------~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~ 138 (187)
.+.+ ..++||+|++|+.... ...+++.+.++|+|||.+++..+.+...
T Consensus 308 ~~~~-----~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~-- 380 (429)
T 1sqg_A 308 SQWC-----GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPE-- 380 (429)
T ss_dssp HHHH-----TTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGG--
T ss_pred hhhc-----ccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChh--
Confidence 4333 1368999999863211 1367888999999999999976554221
Q ss_pred CCCCCCCCCcccchHHHHHHHHHHhhcCCCeEE-----------Eeeec---CCceEEEEEcC
Q 029803 139 VPEEQVPDHFRGSSRQAILDLNRSLADDPRVQL-----------SHVAL---GDGITICRRIF 187 (187)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------~~lp~---~~G~~~~~~~~ 187 (187)
+ -...+..| +..+++++. .++|. .+|+-+|+-+|
T Consensus 381 ---e---------ne~~v~~~---l~~~~~~~~~~~~~~~~~~~~~~P~~~~~dGff~a~l~k 428 (429)
T 1sqg_A 381 ---E---------NSLQIKAF---LQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 (429)
T ss_dssp ---G---------THHHHHHH---HHHCTTCEECSSBCSSSBSEEECCCTTSCCSEEEEEEEC
T ss_pred ---h---------HHHHHHHH---HHhCCCCEEeCCCCCCCCeEEECCCCCCCCceEEEEEEE
Confidence 1 11124444 444565543 44563 38998888765
No 71
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.65 E-value=1.9e-15 Score=112.04 Aligned_cols=105 Identities=14% Similarity=0.278 Sum_probs=87.0
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.++.+|||||||+|..+..++...+ +.+++++|+++.+++.|++++...++. +++++++|+.+....+ ..++|
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~giD~s~~~l~~a~~~~~~~~~~-nv~~~~~d~~~l~~~~-----~~~~~ 109 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNP-DINYIGIELFKSVIVTAVQKVKDSEAQ-NVKLLNIDADTLTDVF-----EPGEV 109 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHSCCS-SEEEECCCGGGHHHHC-----CTTSC
T ss_pred CCCceEEEEecCCCHHHHHHHHHCC-CCCEEEEEechHHHHHHHHHHHHcCCC-CEEEEeCCHHHHHhhc-----CcCCc
Confidence 3567999999999999999999876 789999999999999999999988875 5999999998743222 24689
Q ss_pred eEEEEeCCCc-----------ccHHHHHHHHhccCCCeEEEEe
Q 029803 98 DYAFVDADKD-----------NYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 98 D~i~~d~~~~-----------~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
|.|++....+ ....+++.+.+.|+|||.+++.
T Consensus 110 d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~ 152 (213)
T 2fca_A 110 KRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK 152 (213)
T ss_dssp CEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred CEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEE
Confidence 9998864211 1467899999999999999884
No 72
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.65 E-value=5.7e-16 Score=114.18 Aligned_cols=112 Identities=20% Similarity=0.215 Sum_probs=90.8
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029803 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 83 (187)
Q Consensus 4 ~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 83 (187)
.+.....+...+...++.+|||+|||+|..+..+++. ..+|+++|+++++++.+++++...++. +++++++|+.+.
T Consensus 62 ~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~ 137 (210)
T 3lbf_A 62 QPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQG 137 (210)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGC
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccC
Confidence 3444555555556678899999999999999999987 579999999999999999999988876 699999999764
Q ss_pred HHHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEe
Q 029803 84 LDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 84 ~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
... .++||+|+++....... +.+.++|+|||++++.
T Consensus 138 ~~~-------~~~~D~i~~~~~~~~~~---~~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 138 WQA-------RAPFDAIIVTAAPPEIP---TALMTQLDEGGILVLP 173 (210)
T ss_dssp CGG-------GCCEEEEEESSBCSSCC---THHHHTEEEEEEEEEE
T ss_pred Ccc-------CCCccEEEEccchhhhh---HHHHHhcccCcEEEEE
Confidence 322 37899999986544433 3578999999999985
No 73
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.65 E-value=1.1e-15 Score=113.29 Aligned_cols=105 Identities=16% Similarity=0.282 Sum_probs=87.3
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.++.+|||||||+|..+..++...| +.+++++|+++.+++.|++++...++ .+++++++|+.+. +.. ...++|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~-~~~----~~~~~~ 112 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDL-TDY----FEDGEI 112 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCG-GGT----SCTTCC
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHH-Hhh----cCCCCC
Confidence 3577999999999999999999887 78999999999999999999998887 4799999998763 211 124689
Q ss_pred eEEEEeCCCc-----------ccHHHHHHHHhccCCCeEEEEe
Q 029803 98 DYAFVDADKD-----------NYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 98 D~i~~d~~~~-----------~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
|+|++..... .+..+++.+.++|+|||++++.
T Consensus 113 D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (214)
T 1yzh_A 113 DRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK 155 (214)
T ss_dssp SEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred CEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence 9999985322 2367999999999999999884
No 74
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.64 E-value=1.8e-14 Score=115.83 Aligned_cols=109 Identities=11% Similarity=0.202 Sum_probs=89.4
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCC-cEEEEEcchHHHHHHHhhcccCCCc
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDH-KINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
.++++|||+|||+|..++.++... ..+|+++|+++.+++.|++|++.+++.+ +++++++|+.+.++.+... ..+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g--a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~---~~~ 285 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG--AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRH---HLT 285 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT--BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHT---TCC
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHh---CCC
Confidence 578899999999999999999852 3599999999999999999999998875 7999999999877665322 458
Q ss_pred eeEEEEeCCCc------------ccHHHHHHHHhccCCCeEEEEeCC
Q 029803 97 FDYAFVDADKD------------NYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 97 ~D~i~~d~~~~------------~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
||+|++|+... .+..+++.+.++|+|||++++...
T Consensus 286 fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~ 332 (385)
T 2b78_A 286 YDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN 332 (385)
T ss_dssp EEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 99999986431 134466777899999999998643
No 75
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.64 E-value=9.8e-16 Score=115.10 Aligned_cols=115 Identities=18% Similarity=0.186 Sum_probs=87.2
Q ss_pred HHHHHHHHH--cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHH
Q 029803 9 QLMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 86 (187)
Q Consensus 9 ~ll~~l~~~--~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 86 (187)
+++..+... .++.+|||||||+|..+..++... ..+|+++|+++.+++.|+++....+ .+++++++|+.+..+.
T Consensus 48 ~~~~~l~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~ 123 (236)
T 1zx0_A 48 PYMHALAAAASSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPT 123 (236)
T ss_dssp HHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGG
T ss_pred HHHHHHHhhcCCCCCeEEEEeccCCHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhcc
Confidence 344444443 466799999999999999997642 3499999999999999999887655 4699999999876433
Q ss_pred HhhcccCCCceeEEEEeCCC--------cccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 87 LLKYSENEGSFDYAFVDADK--------DNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 87 ~~~~~~~~~~~D~i~~d~~~--------~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
+ ..++||+|++|... .....+++++.++|||||++++.+..
T Consensus 124 ~-----~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 124 L-----PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp S-----CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred c-----CCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 3 25789999994211 11235689999999999999986543
No 76
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.64 E-value=2.3e-15 Score=116.00 Aligned_cols=104 Identities=15% Similarity=0.141 Sum_probs=89.2
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..++.++...+ . +|+++|+++.+++.++++++.+++.++++++++|+.+... .++|
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~-~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~--------~~~f 193 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGK-A-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--------ENIA 193 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTC-C-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--------CSCE
T ss_pred CCCCEEEEecccCCHHHHHHHHhCC-C-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc--------cCCc
Confidence 4578999999999999999998754 2 8999999999999999999999988889999999976532 3789
Q ss_pred eEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 98 DYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 98 D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
|+|+++.. .....+++.+.++|+|||++++....
T Consensus 194 D~Vi~~~p-~~~~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 194 DRILMGYV-VRTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp EEEEECCC-SSGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred cEEEECCc-hhHHHHHHHHHHHCCCCeEEEEEEee
Confidence 99999864 34467888999999999999986554
No 77
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.64 E-value=2.1e-15 Score=112.62 Aligned_cols=103 Identities=21% Similarity=0.305 Sum_probs=84.0
Q ss_pred HcCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029803 17 LVNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 95 (187)
Q Consensus 17 ~~~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 95 (187)
..++.+|||+||| +|..+..++... +.+|+++|+++.+++.+++++..++. +++++++|+... ..+ ..+
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~-~~~-----~~~ 122 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGII-KGV-----VEG 122 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSS-TTT-----CCS
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhh-hhc-----ccC
Confidence 4577899999999 999999999874 57999999999999999999998887 699999996322 111 247
Q ss_pred ceeEEEEeCCC----------------------cccHHHHHHHHhccCCCeEEEEe
Q 029803 96 SFDYAFVDADK----------------------DNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 96 ~~D~i~~d~~~----------------------~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+||+|+++... ..+..+++.+.++|+|||.+++.
T Consensus 123 ~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 178 (230)
T 3evz_A 123 TFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY 178 (230)
T ss_dssp CEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred ceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence 89999987421 11367899999999999999884
No 78
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.64 E-value=4.7e-15 Score=111.61 Aligned_cols=107 Identities=18% Similarity=0.215 Sum_probs=84.1
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHh------cCCCCcEEEEEcchHHHHHHHhhc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKK------AGVDHKINFIESEALSVLDQLLKY 90 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~------~~~~~~~~~~~~d~~~~~~~~~~~ 90 (187)
..++.+|||||||+|..+..+|...+ +..++++|+++.+++.|++++.. .+. .+++++++|+.+.++...
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~-- 119 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFP-DTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFF-- 119 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGST-TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHC--
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhC--
Confidence 34567899999999999999999876 78999999999999999988764 233 469999999977444332
Q ss_pred ccCCCceeEEEEeCCCcc-----------cHHHHHHHHhccCCCeEEEEe
Q 029803 91 SENEGSFDYAFVDADKDN-----------YCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 91 ~~~~~~~D~i~~d~~~~~-----------~~~~~~~~~~~L~~gG~lv~~ 129 (187)
..++||.|++...... ...+++.+.++|+|||.+++.
T Consensus 120 --~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 120 --YKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp --CTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEE
T ss_pred --CCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEE
Confidence 2478999988642211 247899999999999999874
No 79
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.64 E-value=9e-16 Score=118.41 Aligned_cols=114 Identities=17% Similarity=0.248 Sum_probs=93.3
Q ss_pred HHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHh
Q 029803 9 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLL 88 (187)
Q Consensus 9 ~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 88 (187)
.++..+....++.+|||||||+|.++..++..++.+.+|+++|+++.+++.+++++...+. +++++++|+.+. +
T Consensus 12 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~-~--- 85 (284)
T 3gu3_A 12 FLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEI-E--- 85 (284)
T ss_dssp HHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTC-C---
T ss_pred HHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhc-C---
Confidence 3444444566889999999999999999999887568999999999999999999886554 799999998753 1
Q ss_pred hcccCCCceeEEEEeCC---CcccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 89 KYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 89 ~~~~~~~~~D~i~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
..++||+|++... ..+...+++++.++|+|||++++.+..
T Consensus 86 ----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 86 ----LNDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp ----CSSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ----cCCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 1368999999753 345578999999999999999987655
No 80
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.64 E-value=1.7e-15 Score=113.12 Aligned_cols=113 Identities=13% Similarity=0.134 Sum_probs=91.8
Q ss_pred HHHHHHHc-CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhh
Q 029803 11 MAMLLRLV-NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLK 89 (187)
Q Consensus 11 l~~l~~~~-~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 89 (187)
|+.+.... ++.+|+|||||+|+.++.++...+ ..+|+++|+++.+++.|++|++.+++.+++++.++|..+.+..
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~--- 87 (230)
T 3lec_A 12 LQKVANYVPKGARLLDVGSDHAYLPIFLLQMGY-CDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE--- 87 (230)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTC-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG---
T ss_pred HHHHHHhCCCCCEEEEECCchHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc---
Confidence 34444444 556899999999999999998754 6799999999999999999999999998999999999875422
Q ss_pred cccCCCceeEEEEeC-CCcccHHHHHHHHhccCCCeEEEEeCC
Q 029803 90 YSENEGSFDYAFVDA-DKDNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 90 ~~~~~~~~D~i~~d~-~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.++||+|++.+ .......+++...+.|+++|.+++...
T Consensus 88 ----~~~~D~IviaGmGg~lI~~IL~~~~~~l~~~~~lIlqp~ 126 (230)
T 3lec_A 88 ----ADNIDTITICGMGGRLIADILNNDIDKLQHVKTLVLQPN 126 (230)
T ss_dssp ----GGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred ----ccccCEEEEeCCchHHHHHHHHHHHHHhCcCCEEEEECC
Confidence 23799998754 234466788888899999999999754
No 81
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.63 E-value=7.1e-16 Score=118.49 Aligned_cols=117 Identities=15% Similarity=0.129 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029803 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 84 (187)
Q Consensus 5 ~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 84 (187)
+...+.+..+....++.+|||+|||+|..++.+++..+ .++|+++|+++++++.++++++.+++. +++++++|+.+.
T Consensus 105 ~~~~e~~~~~~~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~-~~~~~~~d~~~~- 181 (272)
T 3a27_A 105 GNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLN-NVIPILADNRDV- 181 (272)
T ss_dssp GGHHHHHHHHTSCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCS-SEEEEESCGGGC-
T ss_pred CchHHHHHHHHhcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEECChHHc-
Confidence 33334444444456778999999999999999999865 679999999999999999999998876 488999999765
Q ss_pred HHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 85 DQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
+. .++||+|+++... ....+++.+.+.|+|||++++....
T Consensus 182 ~~-------~~~~D~Vi~d~p~-~~~~~l~~~~~~LkpgG~l~~s~~~ 221 (272)
T 3a27_A 182 EL-------KDVADRVIMGYVH-KTHKFLDKTFEFLKDRGVIHYHETV 221 (272)
T ss_dssp CC-------TTCEEEEEECCCS-SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred Cc-------cCCceEEEECCcc-cHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 32 3689999998754 6677889999999999999986544
No 82
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.63 E-value=1.2e-15 Score=112.03 Aligned_cols=100 Identities=14% Similarity=0.123 Sum_probs=87.0
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 98 (187)
++.+|||+|||+|..+..++...+ +.+++++|+++.+++.+++++...++.+ ++++++|+.+.. ..++||
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~--------~~~~~D 134 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP-EAHFTLLDSLGKRVRFLRQVQHELKLEN-IEPVQSRVEEFP--------SEPPFD 134 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCSS-EEEEECCTTTSC--------CCSCEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEecchhhCC--------ccCCcC
Confidence 478999999999999999998876 7899999999999999999999888765 999999987642 136899
Q ss_pred EEEEeCCCcccHHHHHHHHhccCCCeEEEEe
Q 029803 99 YAFVDADKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 99 ~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+|++.. ...+..+++.+.++|+|||++++.
T Consensus 135 ~i~~~~-~~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 135 GVISRA-FASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp EEECSC-SSSHHHHHHHHTTSEEEEEEEEEE
T ss_pred EEEEec-cCCHHHHHHHHHHhcCCCcEEEEE
Confidence 999754 456788999999999999999985
No 83
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.63 E-value=7.7e-15 Score=118.33 Aligned_cols=112 Identities=20% Similarity=0.281 Sum_probs=93.4
Q ss_pred HHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCC-CCcEEEEEcchHHHHHHHhhcccC
Q 029803 15 LRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGV-DHKINFIESEALSVLDQLLKYSEN 93 (187)
Q Consensus 15 ~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~ 93 (187)
....++++|||+|||+|..++.++... ..+|+++|+++.+++.|++|++.+++ .++++++++|+.+.++.+...
T Consensus 216 ~~~~~~~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~--- 290 (396)
T 3c0k_A 216 RRYVENKRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDR--- 290 (396)
T ss_dssp HHHCTTCEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHT---
T ss_pred HHhhCCCeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhc---
Confidence 334688999999999999999999852 36999999999999999999999888 657999999999887654322
Q ss_pred CCceeEEEEeCCC------------cccHHHHHHHHhccCCCeEEEEeCC
Q 029803 94 EGSFDYAFVDADK------------DNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 94 ~~~~D~i~~d~~~------------~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.++||+|++|... ..+..++..+.++|+|||++++...
T Consensus 291 ~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 340 (396)
T 3c0k_A 291 GEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSC 340 (396)
T ss_dssp TCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 4689999999643 4567788999999999999988643
No 84
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.63 E-value=3.3e-15 Score=122.37 Aligned_cols=124 Identities=17% Similarity=0.214 Sum_probs=98.3
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029803 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 83 (187)
Q Consensus 4 ~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 83 (187)
......++..++...++.+|||+|||+|..+..++..++..++|+++|+++.+++.++++++..++. +++++++|+.+.
T Consensus 244 qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~ 322 (450)
T 2yxl_A 244 QEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK-IVKPLVKDARKA 322 (450)
T ss_dssp CCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC-SEEEECSCTTCC
T ss_pred cCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC-cEEEEEcChhhc
Confidence 3445566677777778889999999999999999998863489999999999999999999998875 599999998653
Q ss_pred HHHHhhcccCCCceeEEEEeCCCccc-------------------------HHHHHHHHhccCCCeEEEEeCCCC
Q 029803 84 LDQLLKYSENEGSFDYAFVDADKDNY-------------------------CNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 84 ~~~~~~~~~~~~~~D~i~~d~~~~~~-------------------------~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
.+.+ ..++||+|++|+..... ..+++.+.++|+|||.+++..+..
T Consensus 323 ~~~~-----~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 323 PEII-----GEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp SSSS-----CSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred chhh-----ccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 2111 12679999998532111 467899999999999999876653
No 85
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.63 E-value=5.4e-15 Score=114.25 Aligned_cols=114 Identities=18% Similarity=0.223 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHH---HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchH
Q 029803 5 TIHGQLMAMLLR---LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEAL 81 (187)
Q Consensus 5 ~~~~~ll~~l~~---~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 81 (187)
+.+..++..++. ..++.+|||+|||+|..++.++.. + +.+|+++|+++++++.|++|+..+++.++++++++|+.
T Consensus 106 ~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~-~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~ 183 (284)
T 1nv8_A 106 PETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-S-DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFL 183 (284)
T ss_dssp TTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-S-SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTT
T ss_pred hhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcch
Confidence 344555555444 236689999999999999999998 5 88999999999999999999999998878999999997
Q ss_pred HHHHHHhhcccCCCce---eEEEEeCCCc----------------------ccHHHHHHHH-hccCCCeEEEEe
Q 029803 82 SVLDQLLKYSENEGSF---DYAFVDADKD----------------------NYCNYHERLM-KLLKVGGIAVYD 129 (187)
Q Consensus 82 ~~~~~~~~~~~~~~~~---D~i~~d~~~~----------------------~~~~~~~~~~-~~L~~gG~lv~~ 129 (187)
+.++ ++| |+|+++.... +...+++.+. +.++|||++++.
T Consensus 184 ~~~~---------~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 184 EPFK---------EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp GGGG---------GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred hhcc---------cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 6422 467 9999974211 0126889999 999999999985
No 86
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.62 E-value=2e-15 Score=112.54 Aligned_cols=115 Identities=20% Similarity=0.290 Sum_probs=88.5
Q ss_pred HHHHHHH-HHcCCCEEEEEcccccHHHHHHHhhCC----CCCEEEEEeCCcchHHHHHHHHHhcCC----CCcEEEEEcc
Q 029803 9 QLMAMLL-RLVNAKKTIEIGVFTGYSLLLTALTIP----EDGQITAIDVNRETYEIGLPIIKKAGV----DHKINFIESE 79 (187)
Q Consensus 9 ~ll~~l~-~~~~~~~vLeiG~g~G~~~~~la~~~~----~~~~v~~iD~~~~~~~~a~~~~~~~~~----~~~~~~~~~d 79 (187)
.++..+. ...++.+|||||||+|+.+..++.... +.++|+++|+++++++.+++++...++ ..+++++.+|
T Consensus 69 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 148 (227)
T 2pbf_A 69 LSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKN 148 (227)
T ss_dssp HHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECC
T ss_pred HHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECC
Confidence 3444443 356778999999999999999999864 467999999999999999999988773 3469999999
Q ss_pred hHHHHHHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEe
Q 029803 80 ALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+.+..+.... ..++||+|+++..... +++.+.++|+|||++++.
T Consensus 149 ~~~~~~~~~~---~~~~fD~I~~~~~~~~---~~~~~~~~LkpgG~lv~~ 192 (227)
T 2pbf_A 149 IYQVNEEEKK---ELGLFDAIHVGASASE---LPEILVDLLAENGKLIIP 192 (227)
T ss_dssp GGGCCHHHHH---HHCCEEEEEECSBBSS---CCHHHHHHEEEEEEEEEE
T ss_pred hHhcccccCc---cCCCcCEEEECCchHH---HHHHHHHhcCCCcEEEEE
Confidence 8764210000 0268999999875443 357788999999999885
No 87
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.62 E-value=4.2e-15 Score=114.51 Aligned_cols=104 Identities=17% Similarity=0.201 Sum_probs=87.5
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 98 (187)
++.+|||||||+|..+..++.. +.+++++|+++.+++.+++++...++..+++++++|+.+..+. ..++||
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------~~~~fD 138 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASH------LETPVD 138 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGG------CSSCEE
T ss_pred CCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhh------cCCCce
Confidence 3569999999999999999986 5799999999999999999999888877899999999765321 257999
Q ss_pred EEEEeCC---CcccHHHHHHHHhccCCCeEEEEeCC
Q 029803 99 YAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 99 ~i~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
+|++... ..+...+++++.++|+|||++++...
T Consensus 139 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 139 LILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 9999753 34567899999999999999998654
No 88
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.62 E-value=2.1e-15 Score=113.48 Aligned_cols=113 Identities=11% Similarity=0.142 Sum_probs=91.5
Q ss_pred HHHHHHHc-CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhh
Q 029803 11 MAMLLRLV-NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLK 89 (187)
Q Consensus 11 l~~l~~~~-~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 89 (187)
|+.+.... ++.+|||||||+|+.++.++...+ ..+|+++|+++.+++.|++|++.+++.+++++..+|..+.+..
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~--- 87 (244)
T 3gnl_A 12 LEKVASYITKNERIADIGSDHAYLPCFAVKNQT-ASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK--- 87 (244)
T ss_dssp HHHHHTTCCSSEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG---
T ss_pred HHHHHHhCCCCCEEEEECCccHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc---
Confidence 34444433 457899999999999999998754 6799999999999999999999999988999999999875321
Q ss_pred cccCCCceeEEEEeC-CCcccHHHHHHHHhccCCCeEEEEeCC
Q 029803 90 YSENEGSFDYAFVDA-DKDNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 90 ~~~~~~~~D~i~~d~-~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
..+||+|++.+ .......+++...+.|++++.+|+...
T Consensus 88 ----~~~~D~IviagmGg~lI~~IL~~~~~~L~~~~~lIlq~~ 126 (244)
T 3gnl_A 88 ----KDAIDTIVIAGMGGTLIRTILEEGAAKLAGVTKLILQPN 126 (244)
T ss_dssp ----GGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred ----cccccEEEEeCCchHHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 13699998754 334567788888899999999999743
No 89
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.62 E-value=1.4e-14 Score=116.75 Aligned_cols=108 Identities=23% Similarity=0.345 Sum_probs=90.9
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 98 (187)
++++|||+|||+|..++.++.. + ..+|+++|+++.+++.++++++.+++.++++++++|+.+.++.+... .++||
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g-~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~---~~~fD 291 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-G-ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKK---GEKFD 291 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHT---TCCEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhh---CCCCC
Confidence 7889999999999999999985 2 46999999999999999999999888767999999999876654322 46899
Q ss_pred EEEEeCCC------------cccHHHHHHHHhccCCCeEEEEeCC
Q 029803 99 YAFVDADK------------DNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 99 ~i~~d~~~------------~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
+|++|... ..+..++..+.++|+|||++++...
T Consensus 292 ~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 336 (396)
T 2as0_A 292 IVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC 336 (396)
T ss_dssp EEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 99999643 3456788899999999998887543
No 90
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.62 E-value=2.7e-15 Score=115.34 Aligned_cols=112 Identities=21% Similarity=0.282 Sum_probs=93.0
Q ss_pred HHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHh
Q 029803 9 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLL 88 (187)
Q Consensus 9 ~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 88 (187)
..+...+...++.+|||+|||+|..+..+++.+.+..+++++|+++++++.++++++..++.++++++.+|+.+.+
T Consensus 102 ~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---- 177 (277)
T 1o54_A 102 SFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGF---- 177 (277)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCC----
T ss_pred HHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcc----
Confidence 3444445566788999999999999999999864478999999999999999999998887678999999987642
Q ss_pred hcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 89 KYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 89 ~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
..++||+|+++. .....+++.+.++|+|||.+++..
T Consensus 178 ----~~~~~D~V~~~~--~~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 178 ----DEKDVDALFLDV--PDPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp ----SCCSEEEEEECC--SCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred ----cCCccCEEEECC--cCHHHHHHHHHHHcCCCCEEEEEe
Confidence 136899999975 344578899999999999999854
No 91
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.61 E-value=1.1e-15 Score=118.42 Aligned_cols=114 Identities=15% Similarity=0.285 Sum_probs=86.3
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCC---------------------------
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD--------------------------- 70 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~--------------------------- 70 (187)
.++++|||||||+|..+..++..++ ..+|+++|+++.+++.|++++...+..
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKR 123 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHTC---------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccc
Confidence 4678999999999999999999886 689999999999999999987654322
Q ss_pred ------------------------------CcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCC---------cccHH
Q 029803 71 ------------------------------HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK---------DNYCN 111 (187)
Q Consensus 71 ------------------------------~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~---------~~~~~ 111 (187)
.++++.++|.......+.. ...++||+|++.... .....
T Consensus 124 ~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~--~~~~~fD~I~~~~vl~~ihl~~~~~~~~~ 201 (292)
T 3g07_A 124 SCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVE--AQTPEYDVVLCLSLTKWVHLNWGDEGLKR 201 (292)
T ss_dssp ------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHT--TCCCCEEEEEEESCHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccCccccccccccccccccccccceEEecccccCcccccc--ccCCCcCEEEEChHHHHhhhcCCHHHHHH
Confidence 5799999998632211110 135799999987532 14567
Q ss_pred HHHHHHhccCCCeEEEEeCCCCC
Q 029803 112 YHERLMKLLKVGGIAVYDNTLWG 134 (187)
Q Consensus 112 ~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
+++++.++|+|||++++....|.
T Consensus 202 ~l~~~~~~LkpGG~lil~~~~~~ 224 (292)
T 3g07_A 202 MFRRIYRHLRPGGILVLEPQPWS 224 (292)
T ss_dssp HHHHHHHHEEEEEEEEEECCCHH
T ss_pred HHHHHHHHhCCCcEEEEecCCch
Confidence 89999999999999999765543
No 92
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.61 E-value=2.1e-15 Score=118.22 Aligned_cols=114 Identities=21% Similarity=0.327 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHH
Q 029803 6 IHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD 85 (187)
Q Consensus 6 ~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 85 (187)
.....+...+...++.+|||||||+|..+..+++..+..++|+++|+++++++.+++++...++.+ +++..+|+.+..+
T Consensus 62 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~-v~~~~~d~~~~~~ 140 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIEN-VIFVCGDGYYGVP 140 (317)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCGGGCCG
T ss_pred HHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCC-eEEEECChhhccc
Confidence 444444445566788999999999999999999876535789999999999999999999888765 9999999876432
Q ss_pred HHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 86 QLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 86 ~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
. .++||+|+++...+... +.+.++|+|||++++..
T Consensus 141 ~-------~~~fD~Iv~~~~~~~~~---~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 141 E-------FSPYDVIFVTVGVDEVP---ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp G-------GCCEEEEEECSBBSCCC---HHHHHHEEEEEEEEEEB
T ss_pred c-------CCCeEEEEEcCCHHHHH---HHHHHhcCCCcEEEEEE
Confidence 2 36899999986544433 56778999999999964
No 93
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.61 E-value=5.5e-15 Score=113.01 Aligned_cols=118 Identities=16% Similarity=0.283 Sum_probs=95.4
Q ss_pred HHHHHHHHHHH---cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029803 7 HGQLMAMLLRL---VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 83 (187)
Q Consensus 7 ~~~ll~~l~~~---~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 83 (187)
...++..++.. .++.+|||||||+|..+..+++.. +.+|+++|+++.+++.+++++...++.+++++..+|+.+.
T Consensus 46 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 123 (273)
T 3bus_A 46 TDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDL 123 (273)
T ss_dssp HHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccC
Confidence 34455555543 467899999999999999999865 5799999999999999999999988888899999998652
Q ss_pred HHHHhhcccCCCceeEEEEeCC---CcccHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 84 LDQLLKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 84 ~~~~~~~~~~~~~~D~i~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
+ ...++||+|++... ..+...+++++.++|+|||.+++.+...
T Consensus 124 -~------~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 124 -P------FEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp -C------SCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred -C------CCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeec
Confidence 1 12478999998752 3456788999999999999999976553
No 94
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.61 E-value=4.5e-15 Score=109.23 Aligned_cols=115 Identities=10% Similarity=-0.006 Sum_probs=82.6
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcC-----------CCCc
Q 029803 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG-----------VDHK 72 (187)
Q Consensus 4 ~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~-----------~~~~ 72 (187)
++...+++..+ ...++.+|||+|||+|..+.++++. +.+|+++|+|+.+++.|+++..... ...+
T Consensus 8 ~~~l~~~~~~l-~~~~~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~ 83 (203)
T 1pjz_A 8 NKDLQQYWSSL-NVVPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPG 83 (203)
T ss_dssp THHHHHHHHHH-CCCTTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSS
T ss_pred CHHHHHHHHhc-ccCCCCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCc
Confidence 33444444432 2347789999999999999999986 5699999999999999998764210 1246
Q ss_pred EEEEEcchHHHHHHHhhcccCCCceeEEEEeCCC-----cccHHHHHHHHhccCCCeEEEE
Q 029803 73 INFIESEALSVLDQLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 73 ~~~~~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
++++++|+.+....- .++||+|++.... .....+++++.++|||||.+++
T Consensus 84 v~~~~~d~~~l~~~~------~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l 138 (203)
T 1pjz_A 84 IEIWCGDFFALTARD------IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLL 138 (203)
T ss_dssp SEEEEECCSSSTHHH------HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEE
T ss_pred cEEEECccccCCccc------CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 899999987642210 1589999975422 2234578999999999998443
No 95
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.61 E-value=1.5e-15 Score=118.25 Aligned_cols=109 Identities=16% Similarity=0.104 Sum_probs=89.1
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++.+|||||||+|..+..++....++.+|+++|+++.+++.+++++...++.++++++++|+.+. + ..++
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-------~~~~ 187 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKL-D-------TREG 187 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGC-C-------CCSC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcC-C-------ccCC
Confidence 4677899999999999999986333347899999999999999999999888888899999998763 1 1378
Q ss_pred eeEEEEeCCC------cccHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 97 FDYAFVDADK------DNYCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 97 ~D~i~~d~~~------~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
||+|++.... .....+++++.++|+|||++++.+...
T Consensus 188 fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 188 YDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp EEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred eEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 9999986522 223347999999999999999977553
No 96
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.61 E-value=7.4e-14 Score=100.81 Aligned_cols=147 Identities=15% Similarity=0.052 Sum_probs=103.0
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..++.++...| ..+|+++|+++.+++.+++++...+...++++ .|..+..+ .++|
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p-~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~--------~~~~ 116 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENE-KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVY--------KGTY 116 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSC-CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHT--------TSEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCC--------CCCc
Confidence 6689999999999999999988766 67999999999999999999999998766777 55544322 4789
Q ss_pred eEEEEeCCCc---ccHHHHHHHHhccCCCeEEEEeCCC-CCccccCCCCCCCCCcccchHHHHHHHHHHhhcCCCeEEEe
Q 029803 98 DYAFVDADKD---NYCNYHERLMKLLKVGGIAVYDNTL-WGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSH 173 (187)
Q Consensus 98 D~i~~d~~~~---~~~~~~~~~~~~L~~gG~lv~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 173 (187)
|+|+.--.-+ +....+..+++.|+|||++|--++- ..|.-..-... . -+.|.+.+ ....+....
T Consensus 117 DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~--------Y---~~~~~~~~-~~~~~~~~~ 184 (200)
T 3fzg_A 117 DVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEEN--------Y---QLWFESFT-KGWIKILDS 184 (200)
T ss_dssp EEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCC--------H---HHHHHHHT-TTTSCEEEE
T ss_pred ChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhh--------H---HHHHHHhc-cCcceeeee
Confidence 9998753221 1222344788999999999876522 12221111111 1 23344444 556666777
Q ss_pred eecCCceEEEEEcC
Q 029803 174 VALGDGITICRRIF 187 (187)
Q Consensus 174 lp~~~G~~~~~~~~ 187 (187)
+-+++-+....+|+
T Consensus 185 ~~~~nEl~y~~~~~ 198 (200)
T 3fzg_A 185 KVIGNELVYITSGF 198 (200)
T ss_dssp EEETTEEEEEECCC
T ss_pred eeeCceEEEEEecc
Confidence 78888888887765
No 97
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.61 E-value=5.9e-15 Score=114.52 Aligned_cols=117 Identities=15% Similarity=0.111 Sum_probs=89.9
Q ss_pred HHHHHHHH--cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhc-CCCCcEEEEEcchHHHHHH
Q 029803 10 LMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA-GVDHKINFIESEALSVLDQ 86 (187)
Q Consensus 10 ll~~l~~~--~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-~~~~~~~~~~~d~~~~~~~ 86 (187)
+...+... .++.+|||||||+|..+..++..+++..+|+++|+++.+++.+++++... +...+++++++|+.+..
T Consensus 25 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~-- 102 (299)
T 3g5t_A 25 FYKMIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFK-- 102 (299)
T ss_dssp HHHHHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCG--
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCC--
Confidence 34444443 47789999999999999999987634889999999999999999999876 44568999999987631
Q ss_pred Hhh-cccCCCceeEEEEeCC--CcccHHHHHHHHhccCCCeEEEE
Q 029803 87 LLK-YSENEGSFDYAFVDAD--KDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 87 ~~~-~~~~~~~~D~i~~d~~--~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
+.. .....++||+|++... .-+...+++++.++|+|||++++
T Consensus 103 ~~~~~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 103 FLGADSVDKQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp GGCTTTTTSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred ccccccccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEE
Confidence 110 0001268999998742 12667899999999999999988
No 98
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.61 E-value=2.7e-15 Score=110.94 Aligned_cols=114 Identities=26% Similarity=0.312 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029803 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 84 (187)
Q Consensus 5 ~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 84 (187)
+.....+...+...++.+|||||||+|..+..++...++..+++++|+++++++.+++++...++. ++++..+|....+
T Consensus 63 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~ 141 (215)
T 2yxe_A 63 IHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD-NVIVIVGDGTLGY 141 (215)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEESCGGGCC
T ss_pred HHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEECCcccCC
Confidence 444444555556677889999999999999999998743589999999999999999999888775 4999999985432
Q ss_pred HHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEe
Q 029803 85 DQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+. .++||+|++........ +.+.++|+|||.+++.
T Consensus 142 ~~-------~~~fD~v~~~~~~~~~~---~~~~~~L~pgG~lv~~ 176 (215)
T 2yxe_A 142 EP-------LAPYDRIYTTAAGPKIP---EPLIRQLKDGGKLLMP 176 (215)
T ss_dssp GG-------GCCEEEEEESSBBSSCC---HHHHHTEEEEEEEEEE
T ss_pred CC-------CCCeeEEEECCchHHHH---HHHHHHcCCCcEEEEE
Confidence 21 36899999986544433 4778999999999885
No 99
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.61 E-value=2.4e-14 Score=114.39 Aligned_cols=155 Identities=16% Similarity=0.174 Sum_probs=105.5
Q ss_pred cCCCEEEEEccc------ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH--HHHHhh
Q 029803 18 VNAKKTIEIGVF------TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLK 89 (187)
Q Consensus 18 ~~~~~vLeiG~g------~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~ 89 (187)
.++.+||||||| +|..++.+++.+.++++|+++|+++.+.. ...+++++++|+.+. ...+..
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~----------~~~rI~fv~GDa~dlpf~~~l~~ 284 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV----------DELRIRTIQGDQNDAEFLDRIAR 284 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG----------CBTTEEEEECCTTCHHHHHHHHH
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh----------cCCCcEEEEecccccchhhhhhc
Confidence 367899999999 67777777765433799999999999731 235799999998653 222211
Q ss_pred cccCCCceeEEEEeCCC--cccHHHHHHHHhccCCCeEEEEeCCCCCcc--ccCCCCCCCCCcccchHHHHHHHHHHhhc
Q 029803 90 YSENEGSFDYAFVDADK--DNYCNYHERLMKLLKVGGIAVYDNTLWGGT--VAVPEEQVPDHFRGSSRQAILDLNRSLAD 165 (187)
Q Consensus 90 ~~~~~~~~D~i~~d~~~--~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 165 (187)
. .++||+|++++.+ .+....+++++++|||||++++.|+...-. ..... ......++ +...++++.+.+..
T Consensus 285 ~---d~sFDlVisdgsH~~~d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~-~~~~~~~t-ii~~lk~l~D~l~~ 359 (419)
T 3sso_A 285 R---YGPFDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQA-DPQECSGT-SLGLLKSLIDAIQH 359 (419)
T ss_dssp H---HCCEEEEEECSCCCHHHHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCS-STTCCTTS-HHHHHHHHHHHHTG
T ss_pred c---cCCccEEEECCcccchhHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCc-cCCcchhH-HHHHHHHHHHHhcc
Confidence 1 3789999998654 345678999999999999999998872111 11111 01123344 77778888777663
Q ss_pred C---------CCe---EEEeeecCCceEEEEEcC
Q 029803 166 D---------PRV---QLSHVALGDGITICRRIF 187 (187)
Q Consensus 166 ~---------~~~---~~~~lp~~~G~~~~~~~~ 187 (187)
. |.+ .+.-+.+=+++.+..|.+
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~h~y~~i~~~~kg~ 393 (419)
T 3sso_A 360 QELPSDPNRSPGYVDRNIVGLHVYHNVAFVEKGR 393 (419)
T ss_dssp GGSCCCTTCCCCHHHHHEEEEEEETTEEEEEESC
T ss_pred cccCCCcCCCCCccccceeEEEecCcEEEEEecc
Confidence 2 112 145567778888888753
No 100
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.61 E-value=1.1e-14 Score=112.17 Aligned_cols=115 Identities=8% Similarity=0.097 Sum_probs=93.4
Q ss_pred HHHHHHHHHH---HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029803 7 HGQLMAMLLR---LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 83 (187)
Q Consensus 7 ~~~ll~~l~~---~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 83 (187)
...++..++. ..++.+|||||||+|..+..+++..+ .+|+++|+++++++.+++++...++..++++..+|+.+.
T Consensus 49 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 126 (287)
T 1kpg_A 49 QIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF 126 (287)
T ss_dssp HHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC
T ss_pred HHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC
Confidence 3344555544 34667999999999999999996553 599999999999999999999888877899999998542
Q ss_pred HHHHhhcccCCCceeEEEEeCC-----CcccHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 84 LDQLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 84 ~~~~~~~~~~~~~~D~i~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
.++||+|++... ......+++++.++|+|||.+++.+...
T Consensus 127 ----------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 127 ----------DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp ----------CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred ----------CCCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 278999998742 2456789999999999999999977654
No 101
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.61 E-value=9.5e-15 Score=114.23 Aligned_cols=114 Identities=10% Similarity=0.133 Sum_probs=93.8
Q ss_pred HHHHHHHHH---HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029803 8 GQLMAMLLR---LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 84 (187)
Q Consensus 8 ~~ll~~l~~---~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 84 (187)
...+..++. ..++.+|||||||+|..+..+++.. +.+|+++|+++++++.+++++...++.+++++..+|+.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 152 (318)
T 2fk8_A 76 YAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF- 152 (318)
T ss_dssp HHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC-
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC-
Confidence 344555544 3467799999999999999999875 4699999999999999999999888877899999998543
Q ss_pred HHHhhcccCCCceeEEEEeCC-----CcccHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 85 DQLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~i~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
+++||+|++... ......+++++.++|+|||.+++.+...
T Consensus 153 ---------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 197 (318)
T 2fk8_A 153 ---------AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVS 197 (318)
T ss_dssp ---------CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred ---------CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 368999998742 2456789999999999999999976654
No 102
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.60 E-value=6.3e-16 Score=116.34 Aligned_cols=112 Identities=14% Similarity=0.155 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHH
Q 029803 7 HGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 86 (187)
Q Consensus 7 ~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 86 (187)
...++..+....++.+|||+|||+|..+..++.. +.+|+++|+++.+++.+++++...++..+++++++|+.+..+
T Consensus 66 ~~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~- 141 (241)
T 3gdh_A 66 AEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS- 141 (241)
T ss_dssp HHHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG-
T ss_pred HHHHHHHhhhccCCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcc-
Confidence 3444555555568899999999999999999985 579999999999999999999998886689999999987642
Q ss_pred HhhcccCCCceeEEEEeCCCcc---cHHHHHHHHhccCCCeEEEEe
Q 029803 87 LLKYSENEGSFDYAFVDADKDN---YCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 87 ~~~~~~~~~~~D~i~~d~~~~~---~~~~~~~~~~~L~~gG~lv~~ 129 (187)
.++||+|+++..... ....+..+.++|+|||++++.
T Consensus 142 -------~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 142 -------FLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp -------GCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred -------cCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHH
Confidence 379999999864322 222445567899999997764
No 103
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.60 E-value=7.6e-15 Score=117.85 Aligned_cols=106 Identities=24% Similarity=0.345 Sum_probs=90.3
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 98 (187)
++.+|||+|||+|..++.++.. ..+|+++|+++.+++.++++++.+++.+ ++++++|+.+.++.+... .++||
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~-~~~~~~d~~~~~~~~~~~---~~~fD 281 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGN-VRVLEANAFDLLRRLEKE---GERFD 281 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTT-EEEEESCHHHHHHHHHHT---TCCEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCC-ceEEECCHHHHHHHHHhc---CCCee
Confidence 6789999999999999999986 4699999999999999999999998876 999999999887654322 46899
Q ss_pred EEEEeCCC------------cccHHHHHHHHhccCCCeEEEEeCC
Q 029803 99 YAFVDADK------------DNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 99 ~i~~d~~~------------~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
+|++|... ..+..++..+.++|+|||++++...
T Consensus 282 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 282 LVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC 326 (382)
T ss_dssp EEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 99999643 3356788889999999999998644
No 104
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.59 E-value=2.8e-15 Score=114.87 Aligned_cols=107 Identities=26% Similarity=0.319 Sum_probs=90.2
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++.+|||||||+|..+..++...+ +.+++++|+++.+++.+++++...+.. +++++.+|+.+.. ...++
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~-------~~~~~ 105 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNP-DAEITSIDISPESLEKARENTEKNGIK-NVKFLQANIFSLP-------FEDSS 105 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGCC-------SCTTC
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEcccccCC-------CCCCC
Confidence 35778999999999999999999876 789999999999999999999988875 5999999987531 12578
Q ss_pred eeEEEEeCC---CcccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 97 FDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 97 ~D~i~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
||+|++... ..+...+++++.++|+|||++++.+..
T Consensus 106 fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (276)
T 3mgg_A 106 FDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGD 144 (276)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred eeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 999998753 345568899999999999999997644
No 105
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.59 E-value=5.1e-15 Score=110.94 Aligned_cols=104 Identities=12% Similarity=0.106 Sum_probs=85.6
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 98 (187)
++.+|||+|||+|..+..++.. +.+|+++|+++.+++.+++++...+...+++++++|+.+.. ..++||
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~fD 134 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP---ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR--------PTELFD 134 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT---TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC--------CSSCEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC--------CCCCee
Confidence 4569999999999999988762 67999999999999999999877655567999999987632 146899
Q ss_pred EEEEeCC-----CcccHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 99 YAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 99 ~i~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
+|++... ......+++++.++|+|||++++.....
T Consensus 135 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 135 LIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp EEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred EEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecc
Confidence 9998642 2356788999999999999999865543
No 106
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.59 E-value=2.4e-15 Score=112.65 Aligned_cols=107 Identities=13% Similarity=0.125 Sum_probs=86.5
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++.+|||+|||+|+++..+|....++++|+++|+++++++.++++++.. .++..+.+|+.+..... ...++
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~~p~~~~----~~~~~ 147 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDARFPEKYR----HLVEG 147 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTTCGGGGT----TTCCC
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEeccCccccc----cccce
Confidence 568899999999999999999998877899999999999999999886543 36888888875532111 12578
Q ss_pred eeEEEEeCCC-cccHHHHHHHHhccCCCeEEEEeC
Q 029803 97 FDYAFVDADK-DNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 97 ~D~i~~d~~~-~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
+|+||+|... .+...++.++.+.|||||.+++..
T Consensus 148 vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 148 VDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp EEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEEeccCChhHHHHHHHHHHhccCCCEEEEEE
Confidence 9999998643 345678999999999999998853
No 107
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.59 E-value=6.7e-15 Score=110.71 Aligned_cols=116 Identities=17% Similarity=0.208 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHH
Q 029803 7 HGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 86 (187)
Q Consensus 7 ~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 86 (187)
....+.......++.+|||+|||+|..+..++... .+++++|+++.+++.+++++...++. ++++.++|+.+. +
T Consensus 9 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~-~- 82 (239)
T 1xxl_A 9 SLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAESL-P- 82 (239)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTBC-C-
T ss_pred CcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEecccccC-C-
Confidence 33444555567788999999999999999998864 49999999999999999999888765 599999998642 1
Q ss_pred HhhcccCCCceeEEEEeCC---CcccHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 87 LLKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 87 ~~~~~~~~~~~D~i~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
...++||+|++... ..+...+++++.++|+|||.+++.+...
T Consensus 83 -----~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 83 -----FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp -----SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred -----CCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 12478999998753 3456788999999999999999865543
No 108
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.59 E-value=4.7e-15 Score=112.73 Aligned_cols=107 Identities=13% Similarity=0.229 Sum_probs=87.6
Q ss_pred HHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 15 LRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 15 ~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
+...++.+|||||||+|..+..++... .+++++|+++++++.+++++...++. ++++..+|+.+. + ...
T Consensus 33 l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~l-~------~~~ 101 (260)
T 1vl5_A 33 AALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQ-QVEYVQGDAEQM-P------FTD 101 (260)
T ss_dssp HTCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCC-CC-C------SCT
T ss_pred hCCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEecHHhC-C------CCC
Confidence 345678899999999999999999874 49999999999999999999887765 599999998652 1 124
Q ss_pred CceeEEEEeCC---CcccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 95 GSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 95 ~~~D~i~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
++||+|++... ..+...+++++.++|+|||.+++.+..
T Consensus 102 ~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~ 142 (260)
T 1vl5_A 102 ERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNS 142 (260)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 78999998753 345678999999999999999986543
No 109
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.59 E-value=1.2e-14 Score=119.72 Aligned_cols=121 Identities=14% Similarity=0.199 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHc--CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029803 6 IHGQLMAMLLRLV--NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 83 (187)
Q Consensus 6 ~~~~ll~~l~~~~--~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 83 (187)
....++..++... ++.+|||+|||+|..+..++..++..++|+++|+++.+++.++++++.+++. +++++++|+.+.
T Consensus 102 ~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~-nv~~~~~D~~~~ 180 (479)
T 2frx_A 102 ASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS-NVALTHFDGRVF 180 (479)
T ss_dssp HHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCCSTTH
T ss_pred HHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEeCCHHHh
Confidence 3445555566666 7889999999999999999998865689999999999999999999998876 599999998765
Q ss_pred HHHHhhcccCCCceeEEEEeCCCcc-------------------------cHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 84 LDQLLKYSENEGSFDYAFVDADKDN-------------------------YCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 84 ~~~~~~~~~~~~~~D~i~~d~~~~~-------------------------~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
.... .++||.|++|+.... ...+++.+.++|||||.|++..+.+
T Consensus 181 ~~~~------~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 181 GAAV------PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp HHHS------TTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hhhc------cccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 3322 468999999853210 1357888899999999999976654
No 110
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.59 E-value=5.5e-14 Score=120.51 Aligned_cols=160 Identities=12% Similarity=0.145 Sum_probs=112.3
Q ss_pred HHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhc------CCCCcEEEEEcchHHHH
Q 029803 11 MAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA------GVDHKINFIESEALSVL 84 (187)
Q Consensus 11 l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~------~~~~~~~~~~~d~~~~~ 84 (187)
+..++...++.+|||+|||+|..+..+++..++..+|+++|+++.+++.|++++... +. .+++++++|+.+..
T Consensus 713 LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVefiqGDa~dLp 791 (950)
T 3htx_A 713 ALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSATLYDGSILEFD 791 (950)
T ss_dssp HHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEEEEESCTTSCC
T ss_pred HHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceEEEECchHhCC
Confidence 344445568899999999999999999987644579999999999999999977643 33 37999999987631
Q ss_pred HHHhhcccCCCceeEEEEeCCCcc-----cHHHHHHHHhccCCCeEEEEeCCCC------Ccc----------c-cCCCC
Q 029803 85 DQLLKYSENEGSFDYAFVDADKDN-----YCNYHERLMKLLKVGGIAVYDNTLW------GGT----------V-AVPEE 142 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~i~~d~~~~~-----~~~~~~~~~~~L~~gG~lv~~~~~~------~~~----------~-~~~~~ 142 (187)
. ..++||+|++.....+ ...+++.+.++|+|| .+++..... .+. . .....
T Consensus 792 ~-------~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN~lF~~Lnp~tr~~dPd~~~~~~f 863 (950)
T 3htx_A 792 S-------RLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFNTILQRSTPETQEENNSEPQLPKF 863 (950)
T ss_dssp T-------TSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGHHHHTCC------------CCSSC
T ss_pred c-------ccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhhhhhhhcccccccccccccccccc
Confidence 1 2478999998754333 234788999999999 666643221 111 0 00001
Q ss_pred CCCCCcccchHHHHHHHHHHhhcCCCeEEEeeecCCc
Q 029803 143 QVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDG 179 (187)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~~G 179 (187)
+...+........++.|.+.+....++++...++|+|
T Consensus 864 Rh~DHrFEWTReEFr~Wae~LAer~GYsVefvGVGDg 900 (950)
T 3htx_A 864 RNHDHKFEWTREQFNQWASKLGKRHNYSVEFSGVGGS 900 (950)
T ss_dssp SCSSCSCCBCHHHHHHHHHHHHHHTTEEEEEEEESSC
T ss_pred cccCcceeecHHHHHHHHHHHHHhcCcEEEEEccCCC
Confidence 1111111114456788888899899999999999987
No 111
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.59 E-value=1.4e-14 Score=117.50 Aligned_cols=114 Identities=14% Similarity=0.171 Sum_probs=89.3
Q ss_pred HHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHH-------HHHHHhcCCC-CcEEEEEcchHH---H
Q 029803 15 LRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIG-------LPIIKKAGVD-HKINFIESEALS---V 83 (187)
Q Consensus 15 ~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a-------~~~~~~~~~~-~~~~~~~~d~~~---~ 83 (187)
+...++.+|||||||+|..++.++...+ ..+|+++|+++.+++.| ++++...++. .+++++++|... .
T Consensus 238 l~l~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~ 316 (433)
T 1u2z_A 238 CQLKKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNR 316 (433)
T ss_dssp TTCCTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHH
T ss_pred cCCCCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccc
Confidence 3456788999999999999999998765 56899999999999988 8888888853 579999876542 1
Q ss_pred HHHHhhcccCCCceeEEEEeC--CCcccHHHHHHHHhccCCCeEEEEeCCCCCc
Q 029803 84 LDQLLKYSENEGSFDYAFVDA--DKDNYCNYHERLMKLLKVGGIAVYDNTLWGG 135 (187)
Q Consensus 84 ~~~~~~~~~~~~~~D~i~~d~--~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~ 135 (187)
++.. .++||+|++.. ........++++.+.|+|||.+++.+.+...
T Consensus 317 ~~~~------~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d~f~p~ 364 (433)
T 1u2z_A 317 VAEL------IPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLKSLRSL 364 (433)
T ss_dssp HHHH------GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESSCSSCT
T ss_pred cccc------cCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEeeccCCc
Confidence 2221 26899999863 2345667788999999999999998766543
No 112
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.59 E-value=4.8e-15 Score=114.75 Aligned_cols=109 Identities=13% Similarity=0.195 Sum_probs=91.0
Q ss_pred HHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029803 16 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 95 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 95 (187)
...++.+|||||||+|..+..+++.. +.+++++|+++.+++.+++++...++..+++++++|+.+. + ...+
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~------~~~~ 149 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI-P------CEDN 149 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC-S------SCTT
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC-C------CCCC
Confidence 44577899999999999999999875 4699999999999999999999888888899999998653 1 1247
Q ss_pred ceeEEEEeCC---CcccHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 96 SFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 96 ~~D~i~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
+||+|++... ......+++++.++|+|||.+++.+...
T Consensus 150 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 150 SYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEecc
Confidence 8999998753 2346788999999999999999976543
No 113
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.59 E-value=6.7e-15 Score=111.86 Aligned_cols=115 Identities=10% Similarity=0.048 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHh----------c------CC
Q 029803 6 IHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKK----------A------GV 69 (187)
Q Consensus 6 ~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~----------~------~~ 69 (187)
...+++..+....++.+|||+|||+|..+.++++. +.+|+++|+|+.+++.|+++... . ..
T Consensus 55 ~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (252)
T 2gb4_A 55 LLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSS 131 (252)
T ss_dssp HHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEET
T ss_pred HHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccC
Confidence 33444444333347789999999999999999985 56999999999999999876531 0 01
Q ss_pred CCcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCC-----CcccHHHHHHHHhccCCCeEEEEe
Q 029803 70 DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 70 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
..+++++++|+.+.... ..++||+|+.... .+....+++++.++|+|||++++.
T Consensus 132 ~~~i~~~~~D~~~l~~~------~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 132 SGSISLYCCSIFDLPRA------NIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp TSSEEEEESCTTTGGGG------CCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCceEEEECccccCCcc------cCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 24699999999764221 1278999996532 233457899999999999998643
No 114
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.59 E-value=1.4e-15 Score=113.85 Aligned_cols=105 Identities=17% Similarity=0.224 Sum_probs=85.6
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++.+|||+|||+|..+..++...+ +.+++++|+++.+++.+++++...+ +++++++|+.+.. ..++
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~--------~~~~ 109 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYP-EATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYD--------FEEK 109 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCC--------CCSC
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccC--------CCCC
Confidence 34678999999999999999999886 7899999999999999999876543 7999999986531 1378
Q ss_pred eeEEEEeCCCcc-----cHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 97 FDYAFVDADKDN-----YCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 97 ~D~i~~d~~~~~-----~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
||+|++...... ...+++++.++|+|||.+++.+...
T Consensus 110 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 110 YDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVH 151 (234)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred ceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 999999853222 2358999999999999999876543
No 115
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.59 E-value=5.1e-15 Score=116.84 Aligned_cols=115 Identities=15% Similarity=0.220 Sum_probs=87.3
Q ss_pred HHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcC----------CCCcEEEEE
Q 029803 8 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG----------VDHKINFIE 77 (187)
Q Consensus 8 ~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~----------~~~~~~~~~ 77 (187)
...+...+...++.+|||+|||+|..+..++....+..+|+++|+++.+++.|++++...+ ...++++++
T Consensus 94 ~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~ 173 (336)
T 2b25_A 94 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH 173 (336)
T ss_dssp HHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred HHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence 3344444567788999999999999999999875446899999999999999999998632 235799999
Q ss_pred cchHHHHHHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEe
Q 029803 78 SEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 78 ~d~~~~~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+|+.+....+ ..++||+|+++.. ....+++++.+.|+|||.+++.
T Consensus 174 ~d~~~~~~~~-----~~~~fD~V~~~~~--~~~~~l~~~~~~LkpgG~lv~~ 218 (336)
T 2b25_A 174 KDISGATEDI-----KSLTFDAVALDML--NPHVTLPVFYPHLKHGGVCAVY 218 (336)
T ss_dssp SCTTCCC------------EEEEEECSS--STTTTHHHHGGGEEEEEEEEEE
T ss_pred CChHHccccc-----CCCCeeEEEECCC--CHHHHHHHHHHhcCCCcEEEEE
Confidence 9987643222 1357999999753 2334788999999999999874
No 116
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.59 E-value=4.3e-15 Score=114.14 Aligned_cols=105 Identities=15% Similarity=0.146 Sum_probs=89.4
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++++|||+|||+|..++.+|+.. ..+|+++|++|.+++.+++|++.+++.++++++++|+.++.+ .+.
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g--~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~--------~~~ 192 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYG--KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--------ENI 192 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHT--CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--------CSC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhc--CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc--------ccC
Confidence 4578999999999999999999863 469999999999999999999999999999999999976532 478
Q ss_pred eeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 97 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 97 ~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
||.|+++..+ ....+++.+.++|++||+|.++...
T Consensus 193 ~D~Vi~~~p~-~~~~~l~~a~~~lk~gG~ih~~~~~ 227 (278)
T 3k6r_A 193 ADRILMGYVV-RTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp EEEEEECCCS-SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred CCEEEECCCC-cHHHHHHHHHHHcCCCCEEEEEeee
Confidence 9999998543 3456788889999999999876543
No 117
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.59 E-value=4.3e-15 Score=110.71 Aligned_cols=113 Identities=18% Similarity=0.258 Sum_probs=87.8
Q ss_pred HHHHHHHH-HHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCC----CCcEEEEEcchHH
Q 029803 8 GQLMAMLL-RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGV----DHKINFIESEALS 82 (187)
Q Consensus 8 ~~ll~~l~-~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~----~~~~~~~~~d~~~ 82 (187)
..++..+. ...++.+|||+|||+|..+..++....+.++|+++|+++.+++.+++++...+. ..+++++.+|+..
T Consensus 65 ~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 144 (226)
T 1i1n_A 65 AYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRM 144 (226)
T ss_dssp HHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGG
T ss_pred HHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCccc
Confidence 34444443 255778999999999999999998764457999999999999999999987664 3469999999864
Q ss_pred HHHHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 83 VLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 83 ~~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.... .++||+|+++..... +++.+.++|+|||++++..
T Consensus 145 ~~~~-------~~~fD~i~~~~~~~~---~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 145 GYAE-------EAPYDAIHVGAAAPV---VPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp CCGG-------GCCEEEEEECSBBSS---CCHHHHHTEEEEEEEEEEE
T ss_pred Cccc-------CCCcCEEEECCchHH---HHHHHHHhcCCCcEEEEEE
Confidence 3211 368999999865433 3467889999999999853
No 118
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.58 E-value=8.2e-15 Score=114.28 Aligned_cols=106 Identities=15% Similarity=0.198 Sum_probs=85.3
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHh---cCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKK---AGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
.++++|||||||+|..+..+++..+ ..+|+++|+++.+++.+++++.. .....+++++.+|+.+..... ..
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~-----~~ 167 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGT-VEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQT-----PD 167 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSS-----CT
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhc-----cC
Confidence 5788999999999999999998644 67999999999999999998743 222357999999998865421 14
Q ss_pred CceeEEEEeCCCcc-------cHHHHHHHHhccCCCeEEEEe
Q 029803 95 GSFDYAFVDADKDN-------YCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 95 ~~~D~i~~d~~~~~-------~~~~~~~~~~~L~~gG~lv~~ 129 (187)
++||+|++|..... ...+++.+.+.|+|||++++.
T Consensus 168 ~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 209 (304)
T 3bwc_A 168 NTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQ 209 (304)
T ss_dssp TCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEE
T ss_pred CceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 78999999864222 157899999999999999986
No 119
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.58 E-value=1.8e-14 Score=115.95 Aligned_cols=103 Identities=18% Similarity=0.251 Sum_probs=84.9
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 98 (187)
++++|||+|||+|..++.++.. +.+|+++|+++.+++.+++|++.+++.. ++.++|+.+.++.+ .+.||
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~---ga~V~avDis~~al~~a~~n~~~ng~~~--~~~~~D~~~~l~~~------~~~fD 282 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARK---GAYALAVDKDLEALGVLDQAALRLGLRV--DIRHGEALPTLRGL------EGPFH 282 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCCC--EEEESCHHHHHHTC------CCCEE
T ss_pred CCCeEEEcccchhHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHhCCCC--cEEEccHHHHHHHh------cCCCC
Confidence 3889999999999999999985 4569999999999999999999988864 45699999877653 23499
Q ss_pred EEEEeCCC------------cccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 99 YAFVDADK------------DNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 99 ~i~~d~~~------------~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
+|++|+.. ..+..+++.+.++|+|||++++....
T Consensus 283 ~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 283 HVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp EEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 99999643 23467888899999999999864433
No 120
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.58 E-value=2.9e-14 Score=122.30 Aligned_cols=112 Identities=21% Similarity=0.361 Sum_probs=93.5
Q ss_pred HHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCC-CcEEEEEcchHHHHHHHhhcc
Q 029803 13 MLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD-HKINFIESEALSVLDQLLKYS 91 (187)
Q Consensus 13 ~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~ 91 (187)
.+....++++|||+|||+|..++.++... ..+|+++|+++.+++.+++|++.+++. .+++++++|+.+.++..
T Consensus 533 ~l~~~~~g~~VLDlg~GtG~~sl~aa~~g--a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~---- 606 (703)
T 3v97_A 533 MLGQMSKGKDFLNLFSYTGSATVHAGLGG--ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA---- 606 (703)
T ss_dssp HHHHHCTTCEEEEESCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHC----
T ss_pred HHHHhcCCCcEEEeeechhHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhc----
Confidence 34445688999999999999999998742 357999999999999999999999987 68999999999977653
Q ss_pred cCCCceeEEEEeCCC--------------cccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 92 ENEGSFDYAFVDADK--------------DNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 92 ~~~~~~D~i~~d~~~--------------~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
.++||+|++|+.. ..+..+++.+.++|+|||++++....
T Consensus 607 --~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 607 --NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp --CCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred --CCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 4789999999642 23556788889999999999987554
No 121
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.58 E-value=7e-15 Score=111.18 Aligned_cols=105 Identities=16% Similarity=0.219 Sum_probs=85.5
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhc--------CCCCcEEEEEcchHHHHHHHhhc
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--------GVDHKINFIESEALSVLDQLLKY 90 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--------~~~~~~~~~~~d~~~~~~~~~~~ 90 (187)
++.+|||||||+|..+..++...+ ..+++++|+++.+++.+++++... ++. +++++.+|+.+.++...
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~-nv~~~~~D~~~~l~~~~-- 124 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFP-EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQ-NINVLRGNAMKFLPNFF-- 124 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHST-TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTT-TEEEEECCTTSCGGGTS--
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCC-CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCC-cEEEEeccHHHHHHHhc--
Confidence 567899999999999999999876 789999999999999999998865 654 69999999976444321
Q ss_pred ccCCCceeEEEEeCCCcc-----------cHHHHHHHHhccCCCeEEEEe
Q 029803 91 SENEGSFDYAFVDADKDN-----------YCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 91 ~~~~~~~D~i~~d~~~~~-----------~~~~~~~~~~~L~~gG~lv~~ 129 (187)
..+.+|.|++...... ...+++.+.++|+|||++++.
T Consensus 125 --~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 125 --EKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp --CTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred --cccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 2478999987643221 257899999999999999883
No 122
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.58 E-value=3.8e-15 Score=119.30 Aligned_cols=104 Identities=13% Similarity=0.091 Sum_probs=86.3
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCC--cEEEEEcchHHHHHHHhhcccCC
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDH--KINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
..++.+|||+|||+|..++.+++..| +.+|+++|+++.+++.+++++..+++.+ +++++.+|+.+.+ ..
T Consensus 220 ~~~~~~VLDlGcG~G~~s~~la~~~p-~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~--------~~ 290 (375)
T 4dcm_A 220 ENLEGEIVDLGCGNGVIGLTLLDKNP-QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV--------EP 290 (375)
T ss_dssp CSCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTC--------CT
T ss_pred ccCCCeEEEEeCcchHHHHHHHHHCC-CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccC--------CC
Confidence 34558999999999999999999876 7899999999999999999999888653 5888999987632 24
Q ss_pred CceeEEEEeCCC--------cccHHHHHHHHhccCCCeEEEEe
Q 029803 95 GSFDYAFVDADK--------DNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 95 ~~~D~i~~d~~~--------~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
++||+|+++... .....+++.+.+.|+|||.+++.
T Consensus 291 ~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 291 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp TCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 689999997532 12346789999999999999884
No 123
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.58 E-value=5.9e-15 Score=111.85 Aligned_cols=112 Identities=18% Similarity=0.162 Sum_probs=90.8
Q ss_pred HHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhc-CCCCcEEEEEcchHHHHHHH
Q 029803 9 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA-GVDHKINFIESEALSVLDQL 87 (187)
Q Consensus 9 ~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-~~~~~~~~~~~d~~~~~~~~ 87 (187)
..+...+...++.+|||+|||+|..+..++..+.+..+++++|+++++++.++++++.. + ..++++.++|+.+. .+
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~~--~~ 162 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEEA--EL 162 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGGC--CC
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhhc--CC
Confidence 33444445667889999999999999999998544789999999999999999999887 7 45799999998764 11
Q ss_pred hhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 88 LKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 88 ~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
..++||+|+++. .....+++++.++|+|||.+++..
T Consensus 163 -----~~~~~D~v~~~~--~~~~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 163 -----EEAAYDGVALDL--MEPWKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp -----CTTCEEEEEEES--SCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred -----CCCCcCEEEECC--cCHHHHHHHHHHhCCCCCEEEEEe
Confidence 236899999975 344578899999999999999853
No 124
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.58 E-value=2.3e-15 Score=111.31 Aligned_cols=108 Identities=21% Similarity=0.229 Sum_probs=86.1
Q ss_pred HHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHh
Q 029803 9 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLL 88 (187)
Q Consensus 9 ~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 88 (187)
+++..+....++.+|||+|||+|..+..++.. ..+++++|+++.+++.+++++...+ +++++++|+.+..
T Consensus 41 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~---- 110 (216)
T 3ofk_A 41 QLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPH---CKRLTVIDVMPRAIGRACQRTKRWS---HISWAATDILQFS---- 110 (216)
T ss_dssp HHHHHHTTTSSEEEEEEECCTTSHHHHHHGGG---EEEEEEEESCHHHHHHHHHHTTTCS---SEEEEECCTTTCC----
T ss_pred HHHHHHcccCCCCcEEEEcCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcccCC---CeEEEEcchhhCC----
Confidence 44554555566789999999999999999886 4699999999999999999876533 6999999987642
Q ss_pred hcccCCCceeEEEEeCCC------cccHHHHHHHHhccCCCeEEEEeC
Q 029803 89 KYSENEGSFDYAFVDADK------DNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 89 ~~~~~~~~~D~i~~d~~~------~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
..++||+|++.... .....+++++.++|+|||++++..
T Consensus 111 ----~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 111 ----TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp ----CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ----CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 14789999997432 223467999999999999999854
No 125
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.58 E-value=3.8e-15 Score=111.89 Aligned_cols=108 Identities=16% Similarity=0.172 Sum_probs=87.2
Q ss_pred HHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHH
Q 029803 8 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 87 (187)
Q Consensus 8 ~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 87 (187)
..++..+....++.+|||||||+|..+..++... .+++++|+++.+++.+++++.. +++++++|+.+..
T Consensus 31 ~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~~--- 99 (250)
T 2p7i_A 31 PFMVRAFTPFFRPGNLLELGSFKGDFTSRLQEHF---NDITCVEASEEAISHAQGRLKD-----GITYIHSRFEDAQ--- 99 (250)
T ss_dssp HHHHHHHGGGCCSSCEEEESCTTSHHHHHHTTTC---SCEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGCC---
T ss_pred HHHHHHHHhhcCCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHcC---
Confidence 3455555556788899999999999999998763 4899999999999999988632 6999999987651
Q ss_pred hhcccCCCceeEEEEeCC---CcccHHHHHHHH-hccCCCeEEEEeCC
Q 029803 88 LKYSENEGSFDYAFVDAD---KDNYCNYHERLM-KLLKVGGIAVYDNT 131 (187)
Q Consensus 88 ~~~~~~~~~~D~i~~d~~---~~~~~~~~~~~~-~~L~~gG~lv~~~~ 131 (187)
..++||+|++... ..+...+++++. ++|+|||.+++...
T Consensus 100 -----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 100 -----LPRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp -----CSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred -----cCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 2578999998753 235578999999 99999999998653
No 126
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.58 E-value=2.6e-15 Score=117.28 Aligned_cols=108 Identities=13% Similarity=0.225 Sum_probs=89.9
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++.+|||+|||+|..+..+++.. +.+|+++|+++++++.+++++...++.++++++.+|+.+. + ...++
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~------~~~~~ 185 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDT-P------FDKGA 185 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-C------CCTTC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcC-C------CCCCC
Confidence 4457899999999999999999874 4699999999999999999999999888899999998653 1 12479
Q ss_pred eeEEEEeCC--CcccHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 97 FDYAFVDAD--KDNYCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 97 ~D~i~~d~~--~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
||+|++... .-....+++++.++|+|||.+++.+...
T Consensus 186 fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 224 (312)
T 3vc1_A 186 VTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGCW 224 (312)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred EeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEccc
Confidence 999998642 2246789999999999999999865443
No 127
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.58 E-value=1.1e-14 Score=107.80 Aligned_cols=104 Identities=16% Similarity=0.160 Sum_probs=79.4
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..+..++...+ .++|+++|+++.+++.+.+..+.. .++.++.+|+.+..... ...++|
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~----~~~~~f 127 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYS----GIVEKV 127 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTT----TTCCCE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhc----ccccce
Confidence 4677999999999999999999877 789999999999887666655543 35888888875421100 013789
Q ss_pred eEEEEeCCCcc-cHHHHHHHHhccCCCeEEEEe
Q 029803 98 DYAFVDADKDN-YCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 98 D~i~~d~~~~~-~~~~~~~~~~~L~~gG~lv~~ 129 (187)
|+|+++..... ...+++++.+.|||||.+++.
T Consensus 128 D~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 128 DLIYQDIAQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp EEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEeccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 99999864333 334589999999999999986
No 128
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.57 E-value=2.5e-14 Score=107.24 Aligned_cols=106 Identities=14% Similarity=0.128 Sum_probs=79.3
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++.+|||+|||+|+.+..++....+.++|+++|+++.++....+..... .++.++.+|+....... ...++
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~~----~~~~~ 146 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSYK----SVVEN 146 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGTT----TTCCC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhhh----ccccc
Confidence 557889999999999999999988766899999999999876554444332 36999999986421100 01368
Q ss_pred eeEEEEeCCCcccHHHH-HHHHhccCCCeEEEEe
Q 029803 97 FDYAFVDADKDNYCNYH-ERLMKLLKVGGIAVYD 129 (187)
Q Consensus 97 ~D~i~~d~~~~~~~~~~-~~~~~~L~~gG~lv~~ 129 (187)
||+||+|.........+ +.+.+.|||||.+++.
T Consensus 147 ~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 147 VDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp EEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEecCCChhHHHHHHHHHHHhCCCCeEEEEE
Confidence 99999997665544444 4555699999999985
No 129
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.57 E-value=9.4e-15 Score=109.68 Aligned_cols=112 Identities=20% Similarity=0.291 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029803 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 84 (187)
Q Consensus 5 ~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 84 (187)
+.....+...+...++.+|||||||+|..+..+++..+ .+|+++|+++++++.+++++...++.+ +++..+|....+
T Consensus 77 ~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~ 153 (235)
T 1jg1_A 77 PHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKN-VHVILGDGSKGF 153 (235)
T ss_dssp HHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCGGGCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCC-cEEEECCcccCC
Confidence 44444555555667888999999999999999998764 799999999999999999999888765 999999973322
Q ss_pred HHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEe
Q 029803 85 DQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+. ..+||+|+++....... +.+.+.|+|||.+++.
T Consensus 154 ~~-------~~~fD~Ii~~~~~~~~~---~~~~~~L~pgG~lvi~ 188 (235)
T 1jg1_A 154 PP-------KAPYDVIIVTAGAPKIP---EPLIEQLKIGGKLIIP 188 (235)
T ss_dssp GG-------GCCEEEEEECSBBSSCC---HHHHHTEEEEEEEEEE
T ss_pred CC-------CCCccEEEECCcHHHHH---HHHHHhcCCCcEEEEE
Confidence 21 24699999986544433 4678899999999885
No 130
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.57 E-value=2.8e-14 Score=113.81 Aligned_cols=110 Identities=15% Similarity=0.122 Sum_probs=90.2
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.++.+|||||||+|..+..+++..| +.+++++|+ |++++.+++++...++.++++++.+|+.+.-..+ +++|
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------p~~~ 249 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNK-EVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPF------PTGF 249 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHST-TCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCC------CCCC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCC------CCCc
Confidence 5778999999999999999999887 789999999 9999999999988888788999999986520001 2689
Q ss_pred eEEEEeCCC-----cccHHHHHHHHhccCCCeEEEEeCCCCCc
Q 029803 98 DYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLWGG 135 (187)
Q Consensus 98 D~i~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~~~ 135 (187)
|+|++...- +....+++++.+.|+|||.+++.+..+..
T Consensus 250 D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 250 DAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDR 292 (363)
T ss_dssp SEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTS
T ss_pred CEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCC
Confidence 999986422 23356799999999999999987766543
No 131
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.57 E-value=2.2e-15 Score=115.76 Aligned_cols=110 Identities=14% Similarity=0.258 Sum_probs=87.4
Q ss_pred HHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhc-CCCCcEEEEEcchHHHHHHHh
Q 029803 10 LMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA-GVDHKINFIESEALSVLDQLL 88 (187)
Q Consensus 10 ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-~~~~~~~~~~~d~~~~~~~~~ 88 (187)
++...+...++.+|||+|||+|..+..+++.+.++.+++++|+++++++.+++++... +. .+++++.+|+.+.+
T Consensus 101 ~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~~~---- 175 (275)
T 1yb2_A 101 YIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIADFI---- 175 (275)
T ss_dssp -----CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTTCC----
T ss_pred HHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhccC----
Confidence 3333444567789999999999999999987433789999999999999999999887 74 46999999987621
Q ss_pred hcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 89 KYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 89 ~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
..++||+|+++. .....+++.+.+.|+|||.+++..
T Consensus 176 ----~~~~fD~Vi~~~--~~~~~~l~~~~~~LkpgG~l~i~~ 211 (275)
T 1yb2_A 176 ----SDQMYDAVIADI--PDPWNHVQKIASMMKPGSVATFYL 211 (275)
T ss_dssp ----CSCCEEEEEECC--SCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred ----cCCCccEEEEcC--cCHHHHHHHHHHHcCCCCEEEEEe
Confidence 246899999964 345678999999999999999864
No 132
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.57 E-value=2.3e-14 Score=110.38 Aligned_cols=105 Identities=13% Similarity=0.189 Sum_probs=86.8
Q ss_pred HHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 15 LRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 15 ~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
+...++.+|||+|||+|..+..++.. +.+|+++|+++.+++.+++++...++ +++++++|+.+.. ..
T Consensus 116 ~~~~~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~--------~~ 182 (286)
T 3m70_A 116 AKIISPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENL--NISTALYDINAAN--------IQ 182 (286)
T ss_dssp HHHSCSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCC--------CC
T ss_pred hhccCCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEecccccc--------cc
Confidence 34458899999999999999999986 56999999999999999999998876 6999999987631 14
Q ss_pred CceeEEEEeCC-----CcccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 95 GSFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 95 ~~~D~i~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
++||+|++... .+....+++++.++|+|||++++....
T Consensus 183 ~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 225 (286)
T 3m70_A 183 ENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAM 225 (286)
T ss_dssp SCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred CCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 78999999752 344568999999999999997764333
No 133
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.57 E-value=8.6e-15 Score=112.43 Aligned_cols=117 Identities=16% Similarity=0.171 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhc-C-CCCcEEEEEcchHH
Q 029803 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA-G-VDHKINFIESEALS 82 (187)
Q Consensus 5 ~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-~-~~~~~~~~~~d~~~ 82 (187)
+.....+...+...++.+|||+|||+|..+..++..+.+..+++++|+++++++.++++++.. + +..+++++++|+.+
T Consensus 85 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~ 164 (280)
T 1i9g_A 85 PKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD 164 (280)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG
T ss_pred HHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh
Confidence 333444444455667889999999999999999986544789999999999999999999887 4 44579999999876
Q ss_pred HHHHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 83 VLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 83 ~~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.. + ..++||+|+++.. ....+++++.++|+|||.+++..
T Consensus 165 ~~--~-----~~~~~D~v~~~~~--~~~~~l~~~~~~L~pgG~l~~~~ 203 (280)
T 1i9g_A 165 SE--L-----PDGSVDRAVLDML--APWEVLDAVSRLLVAGGVLMVYV 203 (280)
T ss_dssp CC--C-----CTTCEEEEEEESS--CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred cC--C-----CCCceeEEEECCc--CHHHHHHHHHHhCCCCCEEEEEe
Confidence 41 1 2468999999753 44578899999999999999853
No 134
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.57 E-value=1.3e-14 Score=109.36 Aligned_cols=114 Identities=23% Similarity=0.299 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029803 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 84 (187)
Q Consensus 5 ~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 84 (187)
+.....+...+...++.+|||+|||+|..+..+++. ..+++++|+++++++.+++++...++..++++..+|+.+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 153 (248)
T 2yvl_A 77 PKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE 153 (248)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC
T ss_pred chhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc
Confidence 334444555555667889999999999999999987 57999999999999999999998888678999999987632
Q ss_pred HHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 85 DQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
. ..++||+|+++.. ....+++++.++|+|||.+++..
T Consensus 154 ~-------~~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~ 190 (248)
T 2yvl_A 154 V-------PEGIFHAAFVDVR--EPWHYLEKVHKSLMEGAPVGFLL 190 (248)
T ss_dssp C-------CTTCBSEEEECSS--CGGGGHHHHHHHBCTTCEEEEEE
T ss_pred c-------CCCcccEEEECCc--CHHHHHHHHHHHcCCCCEEEEEe
Confidence 0 1368999999643 44577899999999999999853
No 135
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.56 E-value=3.4e-14 Score=109.68 Aligned_cols=118 Identities=14% Similarity=0.157 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCC---CcEEEEEcchHH
Q 029803 6 IHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD---HKINFIESEALS 82 (187)
Q Consensus 6 ~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~---~~~~~~~~d~~~ 82 (187)
...+++..++...++.+|||||||+|..+..++.. +.+|+++|+++.+++.++++....+.. .++.+..+|+.+
T Consensus 44 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~ 120 (293)
T 3thr_A 44 EYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLT 120 (293)
T ss_dssp HHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG
T ss_pred HHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhh
Confidence 34466666677778899999999999999999986 459999999999999999887543322 357889999877
Q ss_pred HHHHHhhcccCCCceeEEEEeC----CCcc-------cHHHHHHHHhccCCCeEEEEeC
Q 029803 83 VLDQLLKYSENEGSFDYAFVDA----DKDN-------YCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 83 ~~~~~~~~~~~~~~~D~i~~d~----~~~~-------~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
....+. ..++||+|++.+ .... ...+++++.++|+|||++++..
T Consensus 121 ~~~~~~----~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 121 LDKDVP----AGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp HHHHSC----CTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred Cccccc----cCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 542221 247999999862 1223 6778999999999999999854
No 136
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.56 E-value=4.3e-14 Score=102.81 Aligned_cols=107 Identities=15% Similarity=0.159 Sum_probs=87.3
Q ss_pred HHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhccc
Q 029803 13 MLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSE 92 (187)
Q Consensus 13 ~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 92 (187)
.++...++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++...++. +++++.+|+.+..
T Consensus 26 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~-------- 93 (199)
T 2xvm_A 26 EAVKVVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENLD-NLHTRVVDLNNLT-------- 93 (199)
T ss_dssp HHTTTSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECCGGGCC--------
T ss_pred HHhhccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCCC-CcEEEEcchhhCC--------
Confidence 3445567889999999999999999986 569999999999999999999887764 4999999987531
Q ss_pred CCCceeEEEEeCC-----CcccHHHHHHHHhccCCCeEEEEeCC
Q 029803 93 NEGSFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 93 ~~~~~D~i~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
..++||+|++... ......+++.+.++|+|||.+++.+.
T Consensus 94 ~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 94 FDRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp CCCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 1478999998753 23567789999999999999776443
No 137
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.56 E-value=2.1e-14 Score=114.16 Aligned_cols=119 Identities=16% Similarity=0.163 Sum_probs=96.3
Q ss_pred CcHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH
Q 029803 3 LLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 82 (187)
Q Consensus 3 ~~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 82 (187)
..+..+..+..++...++.+|||+|||+|..++.++....+..+++++|+++.+++.|++|++.+++. ++++.++|+.+
T Consensus 187 l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~ 265 (354)
T 3tma_A 187 LTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARH 265 (354)
T ss_dssp CCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGG
T ss_pred cCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhh
Confidence 34555666666666677889999999999999999987623689999999999999999999999987 79999999987
Q ss_pred HHHHHhhcccCCCceeEEEEeCCCc-----------ccHHHHHHHHhccCCCeEEEEe
Q 029803 83 VLDQLLKYSENEGSFDYAFVDADKD-----------NYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 83 ~~~~~~~~~~~~~~~D~i~~d~~~~-----------~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
.... .++||+|+++.... .+..+++.+.++|+|||.+++.
T Consensus 266 ~~~~-------~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 316 (354)
T 3tma_A 266 LPRF-------FPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALL 316 (354)
T ss_dssp GGGT-------CCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEE
T ss_pred Cccc-------cCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 5321 35789999985321 1366788889999999999884
No 138
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.56 E-value=8.2e-15 Score=109.30 Aligned_cols=106 Identities=17% Similarity=0.195 Sum_probs=83.8
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.++++++.. .+++++++|+.+... +. ...++
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~-~~---~~~~~ 143 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEE-YR---ALVPK 143 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGG-GT---TTCCC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcch-hh---cccCC
Confidence 346789999999999999999987644689999999999999999887654 479999999875311 00 01358
Q ss_pred eeEEEEeCCCcccH-HHHHHHHhccCCCeEEEEe
Q 029803 97 FDYAFVDADKDNYC-NYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 97 ~D~i~~d~~~~~~~-~~~~~~~~~L~~gG~lv~~ 129 (187)
||+|+++....... .+++++.+.|+|||.+++.
T Consensus 144 ~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 144 VDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 99999987544433 4489999999999999986
No 139
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.56 E-value=6.5e-14 Score=112.22 Aligned_cols=113 Identities=12% Similarity=0.051 Sum_probs=88.2
Q ss_pred HHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHH-------HhcCCC-CcEEEEEcchHHHH-HH
Q 029803 16 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPII-------KKAGVD-HKINFIESEALSVL-DQ 86 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~-------~~~~~~-~~~~~~~~d~~~~~-~~ 86 (187)
...++.+|||||||+|..++.+|...+ ..++++||+++.+++.|++++ +.+++. .+++++++|+.+.- ..
T Consensus 170 ~l~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d 248 (438)
T 3uwp_A 170 KMTDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRE 248 (438)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCcccc
Confidence 456788999999999999999998765 457999999999999998764 345553 67999999997642 11
Q ss_pred HhhcccCCCceeEEEEeCC--CcccHHHHHHHHhccCCCeEEEEeCCCCCc
Q 029803 87 LLKYSENEGSFDYAFVDAD--KDNYCNYHERLMKLLKVGGIAVYDNTLWGG 135 (187)
Q Consensus 87 ~~~~~~~~~~~D~i~~d~~--~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~ 135 (187)
. -..||+||+... .+.....+.++++.|||||.|++.+.+...
T Consensus 249 ~------~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p~ 293 (438)
T 3uwp_A 249 R------IANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKPFAPL 293 (438)
T ss_dssp H------HHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSCSSCT
T ss_pred c------cCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeecccCC
Confidence 1 147999998643 345566778889999999999998877644
No 140
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.56 E-value=6.1e-15 Score=110.96 Aligned_cols=116 Identities=13% Similarity=0.191 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHc----CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH
Q 029803 7 HGQLMAMLLRLV----NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 82 (187)
Q Consensus 7 ~~~ll~~l~~~~----~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 82 (187)
...++..++... ++.+|||||||+|..+..++... ..+++++|+++.+++.+++++...+ ..+++++.+|+.+
T Consensus 63 ~~~~~~~l~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~ 139 (241)
T 2ex4_A 63 SRKFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQD 139 (241)
T ss_dssp HHHHHHGGGC----CCCCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGG
T ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhh
Confidence 345555554432 57899999999999999888764 4699999999999999999987654 3468999999765
Q ss_pred HHHHHhhcccCCCceeEEEEeCCCc-----ccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 83 VLDQLLKYSENEGSFDYAFVDADKD-----NYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 83 ~~~~~~~~~~~~~~~D~i~~d~~~~-----~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
.. ...++||+|++..... ....+++++.++|+|||++++.+..
T Consensus 140 ~~-------~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 140 FT-------PEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp CC-------CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cC-------CCCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 31 1245899999985322 2447899999999999999986543
No 141
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.55 E-value=9.2e-14 Score=111.26 Aligned_cols=106 Identities=17% Similarity=0.205 Sum_probs=90.2
Q ss_pred HHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhc---------------CCCCcEEEEEcch
Q 029803 16 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA---------------GVDHKINFIESEA 80 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~---------------~~~~~~~~~~~d~ 80 (187)
...++.+|||+|||+|..++.+++..+ ..+|+++|+++++++.+++|++.+ ++.+ ++++++|+
T Consensus 44 ~~~~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~-i~v~~~Da 121 (378)
T 2dul_A 44 NILNPKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKT-IVINHDDA 121 (378)
T ss_dssp HHHCCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSE-EEEEESCH
T ss_pred HHcCCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCc-eEEEcCcH
Confidence 334789999999999999999999875 578999999999999999999988 7654 99999999
Q ss_pred HHHHHHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 81 LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 81 ~~~~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.+.+... .++||+|++|+ +.....+++.+++.|++||++++..
T Consensus 122 ~~~~~~~------~~~fD~I~lDP-~~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 122 NRLMAER------HRYFHFIDLDP-FGSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHHHS------TTCEEEEEECC-SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHhc------cCCCCEEEeCC-CCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 8876653 35899999986 3344788999999999999888753
No 142
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.55 E-value=2.1e-14 Score=115.20 Aligned_cols=114 Identities=13% Similarity=0.128 Sum_probs=92.3
Q ss_pred cHHHHHHHHHHHHHc-----CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEc
Q 029803 4 LTIHGQLMAMLLRLV-----NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES 78 (187)
Q Consensus 4 ~~~~~~ll~~l~~~~-----~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~ 78 (187)
.+....++..+.... ++.+|||+|||+|..+..+++. +.+|+++|+++.+++.+++++..+++. ++++++
T Consensus 213 d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~~--v~~~~~ 287 (381)
T 3dmg_A 213 DPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANALK--AQALHS 287 (381)
T ss_dssp CHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTCC--CEEEEC
T ss_pred CHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCC--eEEEEc
Confidence 345566777776543 6789999999999999999986 569999999999999999999988764 889999
Q ss_pred chHHHHHHHhhcccCCCceeEEEEeCC--------CcccHHHHHHHHhccCCCeEEEEe
Q 029803 79 EALSVLDQLLKYSENEGSFDYAFVDAD--------KDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 79 d~~~~~~~~~~~~~~~~~~D~i~~d~~--------~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
|+.+... ..++||+|+++.. ......+++++.+.|+|||.+++.
T Consensus 288 D~~~~~~-------~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv 339 (381)
T 3dmg_A 288 DVDEALT-------EEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLV 339 (381)
T ss_dssp STTTTSC-------TTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhhccc-------cCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 9876422 1379999999842 233467899999999999999884
No 143
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.55 E-value=6.7e-15 Score=110.18 Aligned_cols=105 Identities=16% Similarity=0.093 Sum_probs=83.1
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++.+|||+|||+|..+..++...+ .++|+++|+++++++.++++.... .+++++.+|+.+....+ ...++
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~----~~~~~ 143 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEYA----NIVEK 143 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGGT----TTSCC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCccccc----ccCcc
Confidence 34678999999999999999999876 689999999999999999886543 57999999986521101 01268
Q ss_pred eeEEEEeCC-CcccHHHHHHHHhccCCCeEEEEe
Q 029803 97 FDYAFVDAD-KDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 97 ~D~i~~d~~-~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
||+|+.+.. +.....+++++.+.|+|||.+++.
T Consensus 144 ~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 144 VDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 999997743 223466799999999999999985
No 144
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.55 E-value=1e-13 Score=104.70 Aligned_cols=109 Identities=17% Similarity=0.310 Sum_probs=86.5
Q ss_pred HHHHHHHHHH---cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029803 8 GQLMAMLLRL---VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 84 (187)
Q Consensus 8 ~~ll~~l~~~---~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 84 (187)
..++..++.. .++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++...+. +++++++|+.+..
T Consensus 27 ~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~ 101 (252)
T 1wzn_A 27 IDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIA 101 (252)
T ss_dssp HHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCC
T ss_pred HHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhcc
Confidence 3455555553 35689999999999999999885 56999999999999999999987664 5899999987631
Q ss_pred HHHhhcccCCCceeEEEEeCC------CcccHHHHHHHHhccCCCeEEEEe
Q 029803 85 DQLLKYSENEGSFDYAFVDAD------KDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~i~~d~~------~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
..++||+|++... ......+++.+.++|+|||+++++
T Consensus 102 --------~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 102 --------FKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp --------CCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --------cCCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 1368999997532 123567889999999999999975
No 145
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.54 E-value=3.2e-14 Score=104.04 Aligned_cols=111 Identities=14% Similarity=0.131 Sum_probs=86.9
Q ss_pred HHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhc
Q 029803 11 MAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKY 90 (187)
Q Consensus 11 l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 90 (187)
+..++...++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++...+. +++++++|+.+. + +
T Consensus 21 l~~~~~~~~~~~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~-~-~--- 90 (202)
T 2kw5_A 21 LVSVANQIPQGKILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADF-D-I--- 90 (202)
T ss_dssp HHHHHHHSCSSEEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTB-S-C---
T ss_pred HHHHHHhCCCCCEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhc-C-C---
Confidence 444444334449999999999999999875 56999999999999999999987765 689999998653 1 1
Q ss_pred ccCCCceeEEEEeCCC---cccHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 91 SENEGSFDYAFVDADK---DNYCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 91 ~~~~~~~D~i~~d~~~---~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
..++||+|++.... .....+++++.++|+|||.+++.....
T Consensus 91 --~~~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 91 --VADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp --CTTTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred --CcCCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 24689999986432 245678999999999999999976543
No 146
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.54 E-value=1.4e-13 Score=100.74 Aligned_cols=109 Identities=12% Similarity=-0.000 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHH
Q 029803 7 HGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 86 (187)
Q Consensus 7 ~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 86 (187)
...++..+.... +.+|||+|||+|..+..++.. +.+++++|+++.+++.++++. .+++++++|+.+. +
T Consensus 30 ~~~~l~~~~~~~-~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~- 97 (203)
T 3h2b_A 30 DRVLIEPWATGV-DGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQTH------PSVTFHHGTITDL-S- 97 (203)
T ss_dssp THHHHHHHHHHC-CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHHC------TTSEEECCCGGGG-G-
T ss_pred HHHHHHHHhccC-CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC------CCCeEEeCccccc-c-
Confidence 345666666554 889999999999999999886 569999999999999999873 3589999998763 2
Q ss_pred HhhcccCCCceeEEEEeCC-----CcccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 87 LLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 87 ~~~~~~~~~~~D~i~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
+ ..++||+|++... ......+++++.++|+|||.+++....
T Consensus 98 ~-----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 143 (203)
T 3h2b_A 98 D-----SPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFS 143 (203)
T ss_dssp G-----SCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred c-----CCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEcc
Confidence 1 2579999998752 235678999999999999999986544
No 147
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.54 E-value=5.7e-14 Score=110.94 Aligned_cols=108 Identities=18% Similarity=0.217 Sum_probs=85.4
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcC---CC----CcEEEEEcchHHHHHHHhhc
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG---VD----HKINFIESEALSVLDQLLKY 90 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~---~~----~~~~~~~~d~~~~~~~~~~~ 90 (187)
.+|++||+||||+|..+.++++.. ..+|+++|+++.+++.|++++...+ +. ++++++.+|+.++++.....
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~--~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~ 264 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLK--PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 264 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTC--CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCCEEEEEECChhHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhcc
Confidence 368899999999999999998864 3799999999999999999976422 22 27999999999988764211
Q ss_pred ccCCCceeEEEEeCCC-c--------ccHHHHHHH----HhccCCCeEEEEeC
Q 029803 91 SENEGSFDYAFVDADK-D--------NYCNYHERL----MKLLKVGGIAVYDN 130 (187)
Q Consensus 91 ~~~~~~~D~i~~d~~~-~--------~~~~~~~~~----~~~L~~gG~lv~~~ 130 (187)
.++||+||+|... + ....+++.+ .++|+|||++++..
T Consensus 265 ---~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 265 ---GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp ---TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ---CCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 4789999999743 1 225677776 89999999999863
No 148
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.54 E-value=5.1e-15 Score=110.55 Aligned_cols=113 Identities=16% Similarity=0.210 Sum_probs=86.3
Q ss_pred HHHHHHHHH-HHcCCCEEEEEcccccHHHHHHHhhCCC-----CCEEEEEeCCcchHHHHHHHHHhcCC----CCcEEEE
Q 029803 7 HGQLMAMLL-RLVNAKKTIEIGVFTGYSLLLTALTIPE-----DGQITAIDVNRETYEIGLPIIKKAGV----DHKINFI 76 (187)
Q Consensus 7 ~~~ll~~l~-~~~~~~~vLeiG~g~G~~~~~la~~~~~-----~~~v~~iD~~~~~~~~a~~~~~~~~~----~~~~~~~ 76 (187)
.+.++..+. ...++.+|||||||+|+.+..++...+. .++|+++|+++++++.+++++...+. ..+++++
T Consensus 71 ~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 150 (227)
T 1r18_A 71 HAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIV 150 (227)
T ss_dssp HHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEE
Confidence 344444443 3556789999999999999999986531 26999999999999999999887551 2369999
Q ss_pred EcchHHHHHHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEe
Q 029803 77 ESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 77 ~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
.+|..+.++. .++||+|+++...... .+.+.+.|+|||.+++.
T Consensus 151 ~~d~~~~~~~-------~~~fD~I~~~~~~~~~---~~~~~~~LkpgG~lvi~ 193 (227)
T 1r18_A 151 EGDGRKGYPP-------NAPYNAIHVGAAAPDT---PTELINQLASGGRLIVP 193 (227)
T ss_dssp ESCGGGCCGG-------GCSEEEEEECSCBSSC---CHHHHHTEEEEEEEEEE
T ss_pred ECCcccCCCc-------CCCccEEEECCchHHH---HHHHHHHhcCCCEEEEE
Confidence 9998763221 2689999998754443 36778999999999985
No 149
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.54 E-value=4.6e-14 Score=107.96 Aligned_cols=112 Identities=13% Similarity=0.098 Sum_probs=85.9
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcc------hHHHHHHHHHhcCCCCcEEEEEcc-hHHHHHHHhh
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRE------TYEIGLPIIKKAGVDHKINFIESE-ALSVLDQLLK 89 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~------~~~~a~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~ 89 (187)
..++.+|||||||+|..+..++...++..+++++|+++. +++.+++++...++..++++..+| .......+
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-- 118 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPI-- 118 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGG--
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCC--
Confidence 457789999999999999999988643689999999997 999999999988877789999998 32110011
Q ss_pred cccCCCceeEEEEeCCC---cccHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 90 YSENEGSFDYAFVDADK---DNYCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 90 ~~~~~~~~D~i~~d~~~---~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
..++||+|++.... .....+++.+..+++|||.+++.+...
T Consensus 119 ---~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 119 ---ADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp ---TTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECS
T ss_pred ---CCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 24789999987532 233456666667777899999976554
No 150
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.54 E-value=2.4e-14 Score=106.92 Aligned_cols=110 Identities=23% Similarity=0.309 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029803 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 84 (187)
Q Consensus 5 ~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 84 (187)
+.....+...+...++.+|||||||+|..+..++... .+++++|+++++++.+++++...+ +++++.+|+.+.+
T Consensus 56 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~~ 129 (231)
T 1vbf_A 56 LNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLGY 129 (231)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCccccc
Confidence 3344444444556678899999999999999999874 699999999999999999987655 6999999987632
Q ss_pred HHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 85 DQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
+. .++||+|+++....... +.+.++|+|||.+++..
T Consensus 130 ~~-------~~~fD~v~~~~~~~~~~---~~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 130 EE-------EKPYDRVVVWATAPTLL---CKPYEQLKEGGIMILPI 165 (231)
T ss_dssp GG-------GCCEEEEEESSBBSSCC---HHHHHTEEEEEEEEEEE
T ss_pred cc-------CCCccEEEECCcHHHHH---HHHHHHcCCCcEEEEEE
Confidence 21 36899999986544432 46789999999998863
No 151
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.53 E-value=2.1e-14 Score=107.90 Aligned_cols=99 Identities=15% Similarity=0.188 Sum_probs=80.9
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++.+|||||||+|..+..++.. +.+++++|+++++++.++++ ++++.+|+.+.+..+ ..++
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~-----~~~~ 101 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSL-----PDKY 101 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTS-----CTTC
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhc-----CCCC
Confidence 346689999999999999999886 56899999999999988865 778899988865443 3579
Q ss_pred eeEEEEeCCC-----cccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 97 FDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 97 ~D~i~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
||+|++.... +....+++++.++|+|||++++....
T Consensus 102 fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 102 LDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp BSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred eeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 9999987532 24578999999999999999986543
No 152
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.53 E-value=1.4e-14 Score=116.41 Aligned_cols=116 Identities=14% Similarity=0.261 Sum_probs=90.5
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhc-----C-CC-CcEEEEEcchHHHHHHHhh
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA-----G-VD-HKINFIESEALSVLDQLLK 89 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-----~-~~-~~~~~~~~d~~~~~~~~~~ 89 (187)
..++.+|||+|||+|..+..++...+++.+|+++|+++.+++.++++++.. + .. .+++++++|+.+.... ..
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~-~~ 159 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATA-EP 159 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGC-BS
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhc-cc
Confidence 457789999999999999999998754789999999999999999998754 3 22 5799999998753110 00
Q ss_pred cccCCCceeEEEEeCC---CcccHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 90 YSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 90 ~~~~~~~~D~i~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
.....++||+|++... ..+...+++++.++|+|||++++.+...
T Consensus 160 ~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 206 (383)
T 4fsd_A 160 EGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYA 206 (383)
T ss_dssp CCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 0012578999998853 3456789999999999999999976543
No 153
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.53 E-value=3.7e-14 Score=112.57 Aligned_cols=104 Identities=18% Similarity=0.243 Sum_probs=86.9
Q ss_pred HHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029803 16 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 95 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 95 (187)
...++++|||+|||+|..+..+++. + ..+|+++|++ ++++.|+++++..++.++++++++|+.+. .+ ..+
T Consensus 63 ~~~~~~~VLDvGcG~G~~~~~la~~-g-~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~--~~-----~~~ 132 (349)
T 3q7e_A 63 HLFKDKVVLDVGSGTGILCMFAAKA-G-ARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEV--EL-----PVE 132 (349)
T ss_dssp HHHTTCEEEEESCTTSHHHHHHHHT-T-CSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTC--CC-----SSS
T ss_pred ccCCCCEEEEEeccchHHHHHHHHC-C-CCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHc--cC-----CCC
Confidence 4678899999999999999999986 3 5699999999 59999999999999988899999999764 11 247
Q ss_pred ceeEEEEeC------CCcccHHHHHHHHhccCCCeEEEEe
Q 029803 96 SFDYAFVDA------DKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 96 ~~D~i~~d~------~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+||+|+++. .......+++.+.++|+|||+++.+
T Consensus 133 ~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 133 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 999999863 2345567888889999999999854
No 154
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.53 E-value=5.6e-14 Score=112.58 Aligned_cols=106 Identities=13% Similarity=0.176 Sum_probs=87.5
Q ss_pred HHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029803 16 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 95 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 95 (187)
...++++|||+|||+|..+..+++.. ..+|+++|++ .+++.++++++.+++.++++++++|+.+.. ..+
T Consensus 60 ~~~~~~~VLDlGcGtG~ls~~la~~g--~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~ 128 (376)
T 3r0q_C 60 HHFEGKTVLDVGTGSGILAIWSAQAG--ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDIS--------LPE 128 (376)
T ss_dssp TTTTTCEEEEESCTTTHHHHHHHHTT--CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCC--------CSS
T ss_pred ccCCCCEEEEeccCcCHHHHHHHhcC--CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcC--------cCC
Confidence 35678899999999999999999862 3599999999 999999999999999888999999997641 137
Q ss_pred ceeEEEEeCC------CcccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 96 SFDYAFVDAD------KDNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 96 ~~D~i~~d~~------~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
+||+|+++.- ......+++.+.++|+|||+++++...
T Consensus 129 ~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~ 171 (376)
T 3r0q_C 129 KVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHAR 171 (376)
T ss_dssp CEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEE
T ss_pred cceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCe
Confidence 8999998641 133566888888999999999876543
No 155
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.53 E-value=3.7e-14 Score=106.38 Aligned_cols=110 Identities=15% Similarity=0.134 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHc--CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029803 7 HGQLMAMLLRLV--NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 84 (187)
Q Consensus 7 ~~~ll~~l~~~~--~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 84 (187)
..+.+..++... ++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++...+. +++++++|+.+..
T Consensus 23 ~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~ 97 (246)
T 1y8c_A 23 WSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLN 97 (246)
T ss_dssp HHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCC
T ss_pred HHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCC
Confidence 334455555443 6789999999999999999886 46999999999999999999887665 5899999986531
Q ss_pred HHHhhcccCCCceeEEEEeC-CC------cccHHHHHHHHhccCCCeEEEEe
Q 029803 85 DQLLKYSENEGSFDYAFVDA-DK------DNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~i~~d~-~~------~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
..++||+|++.. .. .....+++++.++|+|||+++++
T Consensus 98 --------~~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 98 --------INRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp --------CSCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred --------ccCCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 136899999975 21 34567899999999999999984
No 156
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.53 E-value=3.1e-14 Score=106.64 Aligned_cols=104 Identities=16% Similarity=0.150 Sum_probs=82.5
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHH--HHHhhcccCC
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL--DQLLKYSENE 94 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~~~ 94 (187)
..++.+|||+|||+|..+..+++...+.++|+++|+++.+++.+.++.+.. .+++++++|+.+.. +. ..
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~------~~ 145 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRM------LI 145 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGG------GC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhcc------cC
Confidence 446789999999999999999998644689999999999888888777654 46999999987631 21 14
Q ss_pred CceeEEEEeCCCcc-cHHHHHHHHhccCCCeEEEEe
Q 029803 95 GSFDYAFVDADKDN-YCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 95 ~~~D~i~~d~~~~~-~~~~~~~~~~~L~~gG~lv~~ 129 (187)
++||+|+++..... ...+++++.+.|+|||.+++.
T Consensus 146 ~~~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 146 AMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp CCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CcEEEEEEcCCCccHHHHHHHHHHHHcCCCeEEEEE
Confidence 68999999865322 245688899999999999984
No 157
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.53 E-value=1.5e-13 Score=101.74 Aligned_cols=109 Identities=19% Similarity=0.213 Sum_probs=85.2
Q ss_pred HHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHH
Q 029803 8 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 87 (187)
Q Consensus 8 ~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 87 (187)
..++..+. ..++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++. .+++++++|+.+. +
T Consensus 35 ~~~l~~~~-~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~-~-- 102 (220)
T 3hnr_A 35 EDILEDVV-NKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSF-E-- 102 (220)
T ss_dssp HHHHHHHH-HTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSC-C--
T ss_pred HHHHHHhh-ccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhc-C--
Confidence 34555543 447889999999999999999986 5799999999999999998864 4688999998653 1
Q ss_pred hhcccCCCceeEEEEeCCCc---cc--HHHHHHHHhccCCCeEEEEeCCCC
Q 029803 88 LKYSENEGSFDYAFVDADKD---NY--CNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 88 ~~~~~~~~~~D~i~~d~~~~---~~--~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
..++||+|++..... .. ..+++++.++|+|||.+++.+..+
T Consensus 103 -----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 148 (220)
T 3hnr_A 103 -----VPTSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIF 148 (220)
T ss_dssp -----CCSCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECB
T ss_pred -----CCCCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 127899999985332 22 238899999999999999976443
No 158
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.52 E-value=1.9e-14 Score=109.66 Aligned_cols=105 Identities=14% Similarity=0.132 Sum_probs=81.5
Q ss_pred HHHHHHHHHc-CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHH
Q 029803 9 QLMAMLLRLV-NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 87 (187)
Q Consensus 9 ~ll~~l~~~~-~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 87 (187)
+++..+.... ...+|||||||+|..+..++.. ..+|+++|+++.+++.|++ ..++++.++++.+. +
T Consensus 28 ~l~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~---~~~v~gvD~s~~ml~~a~~-------~~~v~~~~~~~e~~-~-- 94 (257)
T 4hg2_A 28 ALFRWLGEVAPARGDALDCGCGSGQASLGLAEF---FERVHAVDPGEAQIRQALR-------HPRVTYAVAPAEDT-G-- 94 (257)
T ss_dssp HHHHHHHHHSSCSSEEEEESCTTTTTHHHHHTT---CSEEEEEESCHHHHHTCCC-------CTTEEEEECCTTCC-C--
T ss_pred HHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHh---CCEEEEEeCcHHhhhhhhh-------cCCceeehhhhhhh-c--
Confidence 4555555544 3468999999999999999876 4699999999999987753 24699999998653 1
Q ss_pred hhcccCCCceeEEEEeCC--CcccHHHHHHHHhccCCCeEEEEeC
Q 029803 88 LKYSENEGSFDYAFVDAD--KDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 88 ~~~~~~~~~~D~i~~d~~--~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
..+++||+|++... .-+...+++++.++|||||++++-.
T Consensus 95 ----~~~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 95 ----LPPASVDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp ----CCSSCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----ccCCcccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEEE
Confidence 23579999998642 3346778999999999999998743
No 159
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.52 E-value=5.3e-14 Score=112.86 Aligned_cols=106 Identities=19% Similarity=0.116 Sum_probs=90.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCc-EEEEEcchHHHHH-HHhhcccCCC
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHK-INFIESEALSVLD-QLLKYSENEG 95 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~-~~~~~~d~~~~~~-~~~~~~~~~~ 95 (187)
.++.+|||++||+|..++.+++..+...+|+++|+++++++.+++|++.+++.++ ++++++|+.+.+. .+ .+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~------~~ 124 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEW------GF 124 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCC------SS
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhh------CC
Confidence 3568999999999999999998754126899999999999999999999999877 9999999998876 53 36
Q ss_pred ceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 96 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 96 ~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
+||+|++|+ ......+++.+.++|++||+|++.-
T Consensus 125 ~fD~V~lDP-~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 125 GFDYVDLDP-FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp CEEEEEECC-SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcEEEECC-CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 899999997 3344678999999999999888754
No 160
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.52 E-value=5.1e-14 Score=111.39 Aligned_cols=104 Identities=16% Similarity=0.172 Sum_probs=84.8
Q ss_pred HHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 15 LRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 15 ~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
....++.+|||||||+|..+..+++. + ..+|+++|+++ +++.|+++++.+++.++++++++|+.+. .+ ..
T Consensus 60 ~~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~-----~~ 129 (340)
T 2fyt_A 60 PHIFKDKVVLDVGCGTGILSMFAAKA-G-AKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEV--HL-----PV 129 (340)
T ss_dssp GGGTTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTS--CC-----SC
T ss_pred hhhcCCCEEEEeeccCcHHHHHHHHc-C-CCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHh--cC-----CC
Confidence 34567889999999999999999886 3 46999999996 9999999999998877899999998763 11 23
Q ss_pred CceeEEEEeC------CCcccHHHHHHHHhccCCCeEEEE
Q 029803 95 GSFDYAFVDA------DKDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 95 ~~~D~i~~d~------~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
++||+|++.. .......+++.+.++|+|||.++.
T Consensus 130 ~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 130 EKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp SCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred CcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEc
Confidence 6899999864 123345688888999999999983
No 161
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.52 E-value=4.6e-15 Score=113.36 Aligned_cols=97 Identities=9% Similarity=0.045 Sum_probs=80.2
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhc--CC-CCcEEEEEcchHHHHHHHhhcccCC
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--GV-DHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
.++++|||||||+|..+..+++. + .+++++|+++++++.|++++... ++ .++++++.+|+.+.+
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---------- 137 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D--THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---------- 137 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC----------
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH----------
Confidence 46789999999999999999887 4 79999999999999999876431 12 357999999987532
Q ss_pred CceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEe
Q 029803 95 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 95 ~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
++||+|++|... ...+++.+.+.|+|||++++.
T Consensus 138 ~~fD~Ii~d~~d--p~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 138 KKYDLIFCLQEP--DIHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp CCEEEEEESSCC--CHHHHHHHHTTEEEEEEEEEE
T ss_pred hhCCEEEECCCC--hHHHHHHHHHhcCCCcEEEEE
Confidence 579999999643 345899999999999999985
No 162
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.52 E-value=2.9e-14 Score=104.67 Aligned_cols=117 Identities=10% Similarity=0.107 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029803 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 84 (187)
Q Consensus 5 ~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 84 (187)
....+++..+....++.+|||+|||+|..+..++... +.+++++|+++++++.+++++...+ .+++++++|+.+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~- 83 (209)
T 2p8j_A 9 PQLYRFLKYCNESNLDKTVLDCGAGGDLPPLSIFVED--GYKTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRKL- 83 (209)
T ss_dssp THHHHHHHHHHHSSSCSEEEEESCCSSSCTHHHHHHT--TCEEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTSC-
T ss_pred hhHHHHHHHHhccCCCCEEEEECCCCCHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhhC-
Confidence 3455677777777788999999999998755444432 5799999999999999999988765 3588899998652
Q ss_pred HHHhhcccCCCceeEEEEeCCC-----cccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 85 DQLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~i~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
+ ...++||+|++.... .....+++++.++|+|||++++....
T Consensus 84 ~------~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 84 P------FKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp C------SCTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred C------CCCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 1 124689999986422 34567889999999999999987644
No 163
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.52 E-value=3.3e-13 Score=107.76 Aligned_cols=107 Identities=12% Similarity=0.140 Sum_probs=89.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..+..+++..| +.+++++|+ +.+++.+++++...++.+++++..+|..+. + ..+|
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~---~------p~~~ 269 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFP-GLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFET---I------PDGA 269 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTC---C------CSSC
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCC-CCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCC---C------CCCc
Confidence 4678999999999999999999987 789999999 999999999999988888999999998731 1 2389
Q ss_pred eEEEEeCCC-----cccHHHHHHHHhccCCCeEEEEeCCCCCc
Q 029803 98 DYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLWGG 135 (187)
Q Consensus 98 D~i~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~~~ 135 (187)
|+|++.... .....+++++.+.|+|||.+++.+.....
T Consensus 270 D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 270 DVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDE 312 (369)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCS
T ss_pred eEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 999987532 22336899999999999999997766543
No 164
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.52 E-value=1.2e-13 Score=102.21 Aligned_cols=105 Identities=11% Similarity=0.107 Sum_probs=82.9
Q ss_pred HHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 15 LRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 15 ~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
+...++.+|||+|||+|..+..++.. +.+++++|+++.+++.++++ .++++..++..+...... ...
T Consensus 48 ~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~---~~~ 114 (227)
T 3e8s_A 48 ILGRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKV---PVG 114 (227)
T ss_dssp HHHTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCS---CCC
T ss_pred hhcCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh-------cccccchhhHHhhccccc---ccC
Confidence 34557799999999999999999886 56999999999999999877 347788888876522110 123
Q ss_pred CceeEEEEeCC--CcccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 95 GSFDYAFVDAD--KDNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 95 ~~~D~i~~d~~--~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
.+||+|++... ......+++++.++|+|||++++.+..
T Consensus 115 ~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 154 (227)
T 3e8s_A 115 KDYDLICANFALLHQDIIELLSAMRTLLVPGGALVIQTLH 154 (227)
T ss_dssp CCEEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCccEEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEecC
Confidence 56999998743 456778999999999999999997653
No 165
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.52 E-value=3.5e-14 Score=104.74 Aligned_cols=109 Identities=15% Similarity=0.170 Sum_probs=86.9
Q ss_pred HHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHH
Q 029803 8 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 87 (187)
Q Consensus 8 ~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 87 (187)
..++..+....++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++ .+. .+++++++|+.+..
T Consensus 35 ~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~~--- 103 (218)
T 3ou2_A 35 PAALERLRAGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDWT--- 103 (218)
T ss_dssp HHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSCC---
T ss_pred HHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccCC---
Confidence 345555555667789999999999999999987 5699999999999999987 343 46999999987641
Q ss_pred hhcccCCCceeEEEEeCCCcc-----cHHHHHHHHhccCCCeEEEEeCCC
Q 029803 88 LKYSENEGSFDYAFVDADKDN-----YCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 88 ~~~~~~~~~~D~i~~d~~~~~-----~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
..++||+|++...... ...+++++.++|+|||.+++.+..
T Consensus 104 -----~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 104 -----PDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp -----CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -----CCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 2579999998753222 367899999999999999987553
No 166
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.52 E-value=5.3e-14 Score=104.48 Aligned_cols=111 Identities=15% Similarity=0.220 Sum_probs=86.5
Q ss_pred HHHHHHH-HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHh
Q 029803 10 LMAMLLR-LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLL 88 (187)
Q Consensus 10 ll~~l~~-~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 88 (187)
++..+.. ..++.+|||+|||+|..+..++...+ +++++|+++++++.+++++...+ .+++++++|+.+. + +
T Consensus 28 ~~~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~-~-~- 99 (227)
T 1ve3_A 28 LEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKL-S-F- 99 (227)
T ss_dssp HHHHHHHSCCSCCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSC-C-S-
T ss_pred HHHHHHHhcCCCCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcC-C-C-
Confidence 3444443 23578999999999999999988643 99999999999999999988766 4699999998652 1 1
Q ss_pred hcccCCCceeEEEEeCC--C---cccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 89 KYSENEGSFDYAFVDAD--K---DNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 89 ~~~~~~~~~D~i~~d~~--~---~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
..++||+|++... . .....+++++.++|+|||.+++.+..
T Consensus 100 ----~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 100 ----EDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp ----CTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ----CCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 2468999998754 2 23457889999999999999886543
No 167
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.52 E-value=1.2e-13 Score=108.83 Aligned_cols=109 Identities=16% Similarity=0.168 Sum_probs=87.4
Q ss_pred HHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhh
Q 029803 10 LMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLK 89 (187)
Q Consensus 10 ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 89 (187)
.+.......++++|||||||+|..+..+++. + ..+|+++|++ ++++.|+++++.+++.++++++++|+.+.. +
T Consensus 29 ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~-- 101 (328)
T 1g6q_1 29 AIIQNKDLFKDKIVLDVGCGTGILSMFAAKH-G-AKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVH--L-- 101 (328)
T ss_dssp HHHHHHHHHTTCEEEEETCTTSHHHHHHHHT-C-CSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSC--C--
T ss_pred HHHhhHhhcCCCEEEEecCccHHHHHHHHHC-C-CCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhcc--C--
Confidence 3434455678899999999999999998885 2 4699999999 599999999999998888999999987631 1
Q ss_pred cccCCCceeEEEEeC------CCcccHHHHHHHHhccCCCeEEEE
Q 029803 90 YSENEGSFDYAFVDA------DKDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 90 ~~~~~~~~D~i~~d~------~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
..++||+|+++. .......++..+.++|+|||+++.
T Consensus 102 ---~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 102 ---PFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp ---SSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ---CCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 136899999873 123356778888899999999984
No 168
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.52 E-value=1.8e-13 Score=107.77 Aligned_cols=106 Identities=12% Similarity=0.066 Sum_probs=89.0
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 98 (187)
++.+|||||||+|..+..+++.+| +.+++++|+ +++++.+++++...++.+++++..+|..+. + ..+||
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~------p~~~D 237 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHE-DLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDP---L------PAGAG 237 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC---C------CCSCS
T ss_pred CCCEEEEeCCChhHHHHHHHHHCC-CCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCC---C------CCCCc
Confidence 467999999999999999999887 789999999 999999999999988888999999998631 1 23899
Q ss_pred EEEEeCCC-----cccHHHHHHHHhccCCCeEEEEeCCCCCc
Q 029803 99 YAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLWGG 135 (187)
Q Consensus 99 ~i~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~~~ 135 (187)
+|++...- +.....++++.+.|+|||.+++.+.....
T Consensus 238 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 279 (332)
T 3i53_A 238 GYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGD 279 (332)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-
T ss_pred EEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCC
Confidence 99986422 22467899999999999999998776544
No 169
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.51 E-value=5.4e-13 Score=104.86 Aligned_cols=107 Identities=16% Similarity=0.212 Sum_probs=88.9
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..+..+++..+ +.+++++|++ .+++.+++++...++.++++++.+|..+. .+ ...|
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~------~~~~ 233 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNP-NAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEV--DY------GNDY 233 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTS--CC------CSCE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccC--CC------CCCC
Confidence 5678999999999999999999886 7899999999 99999999999888887899999998653 11 2459
Q ss_pred eEEEEeCCC-----cccHHHHHHHHhccCCCeEEEEeCCCCC
Q 029803 98 DYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLWG 134 (187)
Q Consensus 98 D~i~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
|+|++.... +....+++++.+.|+|||.+++.+....
T Consensus 234 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 234 DLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred cEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 999986432 3346789999999999998888766543
No 170
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.51 E-value=9.1e-14 Score=110.16 Aligned_cols=110 Identities=15% Similarity=0.125 Sum_probs=91.1
Q ss_pred cC-CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 18 VN-AKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 18 ~~-~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
.+ +.+|||||||+|..+..+++.+| +.+++++|+ +++++.+++++...++.++++++.+|..+..... .++
T Consensus 177 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------~~~ 248 (352)
T 3mcz_A 177 FARARTVIDLAGGHGTYLAQVLRRHP-QLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFE------GGA 248 (352)
T ss_dssp GTTCCEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGT------TCC
T ss_pred cCCCCEEEEeCCCcCHHHHHHHHhCC-CCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccC------CCC
Confidence 45 78999999999999999999987 789999999 8999999999998888888999999987642111 357
Q ss_pred eeEEEEeCCC-----cccHHHHHHHHhccCCCeEEEEeCCCCCc
Q 029803 97 FDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLWGG 135 (187)
Q Consensus 97 ~D~i~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~~~ 135 (187)
||+|++.... +....+++++.+.|+|||.+++.+.....
T Consensus 249 ~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (352)
T 3mcz_A 249 ADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMND 292 (352)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCT
T ss_pred ccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 9999987532 23467899999999999999987766543
No 171
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.51 E-value=1.1e-13 Score=109.23 Aligned_cols=100 Identities=19% Similarity=0.153 Sum_probs=86.0
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..++. ++ . ..+|+++|+++.+++.+++|++.+++.++++++++|+.+.+ ++|
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~-~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~----------~~f 259 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--N-AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD----------VKG 259 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--T-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC----------CCE
T ss_pred CCCCEEEEccCccCHHHHh-cc--C-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc----------CCC
Confidence 5788999999999999999 77 3 67999999999999999999999998778999999997642 589
Q ss_pred eEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 98 DYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 98 D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
|+|++|... ....+++.+.++|+|||++++....
T Consensus 260 D~Vi~dpP~-~~~~~l~~~~~~L~~gG~l~~~~~~ 293 (336)
T 2yx1_A 260 NRVIMNLPK-FAHKFIDKALDIVEEGGVIHYYTIG 293 (336)
T ss_dssp EEEEECCTT-TGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred cEEEECCcH-hHHHHHHHHHHHcCCCCEEEEEEee
Confidence 999998532 3447889999999999999886544
No 172
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.51 E-value=9.6e-15 Score=110.61 Aligned_cols=120 Identities=13% Similarity=0.109 Sum_probs=86.8
Q ss_pred HHHHHHHHHc---CCCEEEEEcccccHHHHHHHhh--CCCCCEEEEEeCCcchHHHHHHHHHhc---CCCCc--------
Q 029803 9 QLMAMLLRLV---NAKKTIEIGVFTGYSLLLTALT--IPEDGQITAIDVNRETYEIGLPIIKKA---GVDHK-------- 72 (187)
Q Consensus 9 ~ll~~l~~~~---~~~~vLeiG~g~G~~~~~la~~--~~~~~~v~~iD~~~~~~~~a~~~~~~~---~~~~~-------- 72 (187)
.++..++... ++.+|||+|||+|..+..++.. .+ ..+|+++|+++.+++.|++++... ++.++
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~-~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~ 116 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRS-LRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQS 116 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGG-EEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccC-CCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhh
Confidence 4555555432 5679999999999999999987 33 579999999999999999988765 43322
Q ss_pred -----------------EE-------------EEEcchHHHHHHHhhcccCCCceeEEEEeCCC------------cccH
Q 029803 73 -----------------IN-------------FIESEALSVLDQLLKYSENEGSFDYAFVDADK------------DNYC 110 (187)
Q Consensus 73 -----------------~~-------------~~~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~------------~~~~ 110 (187)
++ +.++|+.+..+.... ....+||+|+++... ..+.
T Consensus 117 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~--~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~ 194 (250)
T 1o9g_A 117 ERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAV--LAGSAPDVVLTDLPYGERTHWEGQVPGQPVA 194 (250)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHH--HTTCCCSEEEEECCGGGSSSSSSCCCHHHHH
T ss_pred hhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccc--cCCCCceEEEeCCCeeccccccccccccHHH
Confidence 55 899998764321000 013489999997421 2244
Q ss_pred HHHHHHHhccCCCeEEEEeCC
Q 029803 111 NYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 111 ~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.+++++.++|+|||++++.+.
T Consensus 195 ~~l~~~~~~LkpgG~l~~~~~ 215 (250)
T 1o9g_A 195 GLLRSLASALPAHAVIAVTDR 215 (250)
T ss_dssp HHHHHHHHHSCTTCEEEEEES
T ss_pred HHHHHHHHhcCCCcEEEEeCc
Confidence 788999999999999998433
No 173
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.50 E-value=9.5e-15 Score=110.94 Aligned_cols=104 Identities=18% Similarity=0.237 Sum_probs=85.2
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++.+|||||||+|..+..++... +.+|+++|+++.+++.+++++... .+++++++|+.+. + ...++
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~-~------~~~~~ 120 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTK-E------FPENN 120 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTC-C------CCTTC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccC-C------CCCCc
Confidence 3467799999999999999999875 579999999999999999886543 5799999998753 1 12579
Q ss_pred eeEEEEeCCC-----cccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 97 FDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 97 ~D~i~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
||+|++.... .....+++++.++|+|||.+++.+..
T Consensus 121 fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (266)
T 3ujc_A 121 FDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYC 161 (266)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 9999987532 45567899999999999999997654
No 174
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.50 E-value=7.5e-14 Score=99.36 Aligned_cols=100 Identities=11% Similarity=0.060 Sum_probs=81.5
Q ss_pred HHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029803 16 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 95 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 95 (187)
...++.+|||+|||+|..+..++... .+++++|+++.+++.++++ ..++++..+| . + + ..+
T Consensus 14 ~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~------~~~v~~~~~d-~---~-~-----~~~ 74 (170)
T 3i9f_A 14 FEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK------FDSVITLSDP-K---E-I-----PDN 74 (170)
T ss_dssp HSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH------CTTSEEESSG-G---G-S-----CTT
T ss_pred CcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh------CCCcEEEeCC-C---C-C-----CCC
Confidence 45677899999999999999999864 4999999999999999988 2368999988 1 1 1 257
Q ss_pred ceeEEEEeCC---CcccHHHHHHHHhccCCCeEEEEeCCCCC
Q 029803 96 SFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLWG 134 (187)
Q Consensus 96 ~~D~i~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
+||+|++... ..+...+++++.+.|+|||.+++.+....
T Consensus 75 ~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 116 (170)
T 3i9f_A 75 SVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKE 116 (170)
T ss_dssp CEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred ceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCcc
Confidence 8999998753 34567889999999999999999765543
No 175
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.50 E-value=2.7e-14 Score=108.06 Aligned_cols=99 Identities=10% Similarity=0.188 Sum_probs=81.8
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..+..++...+ .+++++|+++.+++.+++++. ..+++++.+|+.+. + ...++|
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~-~------~~~~~f 109 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGA--KKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDI-A------IEPDAY 109 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGC-C------CCTTCE
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhC-C------CCCCCe
Confidence 3678999999999999999998643 399999999999999998864 35799999998653 1 124799
Q ss_pred eEEEEeCC---CcccHHHHHHHHhccCCCeEEEEe
Q 029803 98 DYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 98 D~i~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
|+|++... ......+++++.++|+|||.+++.
T Consensus 110 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 110 NVVLSSLALHYIASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence 99998753 345678999999999999999985
No 176
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.50 E-value=1.2e-13 Score=106.49 Aligned_cols=105 Identities=12% Similarity=0.136 Sum_probs=85.9
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.++.+|||||||+|..+..++.. + ..+++++|+++.+++.+++++...+...+++++++|+.+.. + ...++|
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~----~~~~~f 134 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-G-IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRH--M----DLGKEF 134 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-T-CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSC--C----CCSSCE
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccc--c----CCCCCc
Confidence 57789999999999999888875 2 46999999999999999999998877678999999987531 1 024789
Q ss_pred eEEEEeCCC-------cccHHHHHHHHhccCCCeEEEEeC
Q 029803 98 DYAFVDADK-------DNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 98 D~i~~d~~~-------~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
|+|++.... .....+++++.++|+|||.+++..
T Consensus 135 D~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 135 DVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp EEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999987532 234678999999999999999864
No 177
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.50 E-value=8.9e-14 Score=105.81 Aligned_cols=106 Identities=14% Similarity=0.097 Sum_probs=82.6
Q ss_pred HHHHHHHHH-cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHH
Q 029803 9 QLMAMLLRL-VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 87 (187)
Q Consensus 9 ~ll~~l~~~-~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 87 (187)
.++..+... .++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++. +++++++|+.+..
T Consensus 39 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~--- 106 (263)
T 3pfg_A 39 DLAALVRRHSPKAASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRNP------DAVLHHGDMRDFS--- 106 (263)
T ss_dssp HHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHCT------TSEEEECCTTTCC---
T ss_pred HHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhCC------CCEEEECChHHCC---
Confidence 334444433 34589999999999999999876 4599999999999999998752 5899999987631
Q ss_pred hhcccCCCceeEEEEeC-CC------cccHHHHHHHHhccCCCeEEEEeCC
Q 029803 88 LKYSENEGSFDYAFVDA-DK------DNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 88 ~~~~~~~~~~D~i~~d~-~~------~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
..++||+|++.. .. .....+++++.++|+|||+++++..
T Consensus 107 -----~~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 107 -----LGRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp -----CSCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred -----ccCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 147899999875 21 2445679999999999999999754
No 178
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.50 E-value=1.8e-13 Score=108.58 Aligned_cols=103 Identities=15% Similarity=0.136 Sum_probs=84.5
Q ss_pred HHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029803 16 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 95 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 95 (187)
...++.+|||||||+|..+..+++. + ..+|+++|+++ +++.++++++.+++.++++++.+|+.+.. ..+
T Consensus 47 ~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~--------~~~ 115 (348)
T 2y1w_A 47 TDFKDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS--------LPE 115 (348)
T ss_dssp GGTTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC--------CSS
T ss_pred ccCCcCEEEEcCCCccHHHHHHHhC-C-CCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCC--------CCC
Confidence 3457889999999999999999885 2 56999999996 88999999999898788999999987531 136
Q ss_pred ceeEEEEeCC-----CcccHHHHHHHHhccCCCeEEEEe
Q 029803 96 SFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 96 ~~D~i~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+||+|++... .+.....+..+.++|+|||++++.
T Consensus 116 ~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 116 QVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred ceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 8999998742 244567788889999999999854
No 179
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.49 E-value=2.1e-13 Score=108.86 Aligned_cols=104 Identities=13% Similarity=0.237 Sum_probs=83.9
Q ss_pred HHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029803 16 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 95 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 95 (187)
...++++|||||||+|..++.+|++. ..+|++||.++ +++.|+++++.+++.++++++++++.+. . .++
T Consensus 80 ~~~~~k~VLDvG~GtGiLs~~Aa~aG--A~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~--~------lpe 148 (376)
T 4hc4_A 80 AALRGKTVLDVGAGTGILSIFCAQAG--ARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETV--E------LPE 148 (376)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHTT--CSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTC--C------CSS
T ss_pred HhcCCCEEEEeCCCccHHHHHHHHhC--CCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeee--c------CCc
Confidence 45689999999999999998888753 35899999986 8999999999999999999999998764 1 147
Q ss_pred ceeEEEEeC------CCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 96 SFDYAFVDA------DKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 96 ~~D~i~~d~------~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
++|+|++.. .......++....++|+|||.++.+.
T Consensus 149 ~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~~ 189 (376)
T 4hc4_A 149 QVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPAS 189 (376)
T ss_dssp CEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESCE
T ss_pred cccEEEeecccccccccchhhhHHHHHHhhCCCCceECCcc
Confidence 899998742 22345566676779999999998643
No 180
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.49 E-value=2.4e-13 Score=106.09 Aligned_cols=119 Identities=18% Similarity=0.166 Sum_probs=90.1
Q ss_pred HHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHH
Q 029803 8 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 87 (187)
Q Consensus 8 ~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 87 (187)
..++..++...++.+|||+|||+|..+..++..+...++|+++|+++.+++.++++++.+++. +++++++|+.+.....
T Consensus 91 s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~-~v~~~~~D~~~~~~~~ 169 (309)
T 2b9e_A 91 SCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS-CCELAEEDFLAVSPSD 169 (309)
T ss_dssp GGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGSCTTC
T ss_pred HHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEeCChHhcCccc
Confidence 345556666778889999999999999999987654689999999999999999999999885 5999999987642211
Q ss_pred hhcccCCCceeEEEEeCCCc---------c-----------c-------HHHHHHHHhccCCCeEEEEeCCC
Q 029803 88 LKYSENEGSFDYAFVDADKD---------N-----------Y-------CNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 88 ~~~~~~~~~~D~i~~d~~~~---------~-----------~-------~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
. ...+||.|++|+... + . ..+++.++++++ ||.|+...+.
T Consensus 170 ~----~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs 236 (309)
T 2b9e_A 170 P----RYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCS 236 (309)
T ss_dssp G----GGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESC
T ss_pred c----ccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCC
Confidence 0 015799999984321 0 0 134667777786 9999886554
No 181
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.49 E-value=3.9e-13 Score=105.78 Aligned_cols=103 Identities=8% Similarity=0.037 Sum_probs=86.8
Q ss_pred CEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeEE
Q 029803 21 KKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYA 100 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i 100 (187)
.+|||+|||+|..+..+++..| +.+++++|+ +.+++.+++++...++.++++++.+|..+. + .++||+|
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~------~~~~D~v 237 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEP-SARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQE---V------PSNGDIY 237 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTC---C------CSSCSEE
T ss_pred CEEEEeCCCchHHHHHHHHHCC-CCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCC---C------CCCCCEE
Confidence 8999999999999999999887 789999999 999999999988777777899999998652 1 3579999
Q ss_pred EEeCCC-----cccHHHHHHHHhccCCCeEEEEeCCCCC
Q 029803 101 FVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLWG 134 (187)
Q Consensus 101 ~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
++.... .....+++++.+.|+|||.+++.+...+
T Consensus 238 ~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 276 (334)
T 2ip2_A 238 LLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTIS 276 (334)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred EEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 987532 2234789999999999999998876643
No 182
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.49 E-value=9.8e-14 Score=105.24 Aligned_cols=101 Identities=22% Similarity=0.237 Sum_probs=82.3
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++ . +...++++.++|+.+. + + ..++
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-~-~~~~~~~~~~~d~~~~-~-~-----~~~~ 104 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKI-A-GVDRKVQVVQADARAI-P-L-----PDES 104 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHT-T-TSCTTEEEEESCTTSC-C-S-----CTTC
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh-h-ccCCceEEEEcccccC-C-C-----CCCC
Confidence 356789999999999999999875 579999999999999999987 2 3345799999998643 1 1 2468
Q ss_pred eeEEEEeCC---CcccHHHHHHHHhccCCCeEEEEe
Q 029803 97 FDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 97 ~D~i~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
||+|++... ..+...+++++.++|+|||.+++.
T Consensus 105 fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 105 VHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred eeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 999998753 234578899999999999999986
No 183
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.49 E-value=4.2e-14 Score=107.14 Aligned_cols=99 Identities=19% Similarity=0.153 Sum_probs=82.5
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++.+|||+|||+|..+..++...+ +.+++++|+++.+++.++++ ..+++++.+|+.+.. ..++
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~------~~~~~~~~~d~~~~~--------~~~~ 95 (259)
T 2p35_A 31 LERVLNGYDLGCGPGNSTELLTDRYG-VNVITGIDSDDDMLEKAADR------LPNTNFGKADLATWK--------PAQK 95 (259)
T ss_dssp CSCCSSEEEETCTTTHHHHHHHHHHC-TTSEEEEESCHHHHHHHHHH------STTSEEEECCTTTCC--------CSSC
T ss_pred CCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh------CCCcEEEECChhhcC--------ccCC
Confidence 34678999999999999999999876 78999999999999999987 236899999986532 1478
Q ss_pred eeEEEEeCC---CcccHHHHHHHHhccCCCeEEEEeC
Q 029803 97 FDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 97 ~D~i~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
||+|++... ..+...+++++.++|+|||.+++..
T Consensus 96 fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 96 ADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp EEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 999999753 2456788999999999999999864
No 184
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.49 E-value=6.4e-14 Score=108.65 Aligned_cols=104 Identities=11% Similarity=0.122 Sum_probs=84.0
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCC--CcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD--HKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
++.+|||||||+|..+..++.. +.+|+++|+++.+++.+++++...+.. .+++++++|+.+. + ..++
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~-~-------~~~~ 150 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAF-A-------LDKR 150 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBC-C-------CSCC
T ss_pred CCCcEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcC-C-------cCCC
Confidence 4459999999999999999986 569999999999999999999876532 5799999998763 1 1478
Q ss_pred eeEEEEeC------CCcccHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 97 FDYAFVDA------DKDNYCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 97 ~D~i~~d~------~~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
||+|++.. .......+++++.++|+|||++++.....
T Consensus 151 fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 151 FGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp EEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred cCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 99998752 11235778999999999999999965443
No 185
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.49 E-value=2.3e-13 Score=105.97 Aligned_cols=107 Identities=18% Similarity=0.178 Sum_probs=76.8
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCC-----cEEEEEcchH-----HHHHHHh
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDH-----KINFIESEAL-----SVLDQLL 88 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~-----~~~~~~~d~~-----~~~~~~~ 88 (187)
++.+|||||||+|..+..++.. . ..+|+++|+|+++++.|+++....+... .+++.+.|.. ..++..
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~-~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~- 124 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG-E-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREV- 124 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTT-
T ss_pred CCCeEEEEecCCcHhHHHHHhc-C-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcc-
Confidence 3679999999999765555543 1 4699999999999999999987655321 2567777661 112211
Q ss_pred hcccCCCceeEEEEeCC------CcccHHHHHHHHhccCCCeEEEEeCC
Q 029803 89 KYSENEGSFDYAFVDAD------KDNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 89 ~~~~~~~~~D~i~~d~~------~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
...++||+|++... .++...+++++.++|||||++++...
T Consensus 125 ---~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 125 ---FYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp ---CCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---ccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 12468999987632 13457899999999999999998644
No 186
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.48 E-value=2.1e-14 Score=108.86 Aligned_cols=97 Identities=14% Similarity=0.200 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHHc-----CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcc
Q 029803 5 TIHGQLMAMLLRLV-----NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESE 79 (187)
Q Consensus 5 ~~~~~ll~~l~~~~-----~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d 79 (187)
+....++..++... ++.+|||+|||+|..+..++...+ +.+|+++|+++.+++.|++++..+++.++++++++|
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 124 (254)
T 2h00_A 46 LNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLN-GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVP 124 (254)
T ss_dssp HHHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC
T ss_pred HHHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcc
Confidence 45556666666533 467999999999999999988765 689999999999999999999998888789999999
Q ss_pred hHH-HHHHHhhcccCCCceeEEEEeC
Q 029803 80 ALS-VLDQLLKYSENEGSFDYAFVDA 104 (187)
Q Consensus 80 ~~~-~~~~~~~~~~~~~~~D~i~~d~ 104 (187)
+.+ ....+.. ...++||+|+++.
T Consensus 125 ~~~~~~~~~~~--~~~~~fD~i~~np 148 (254)
T 2h00_A 125 QKTLLMDALKE--ESEIIYDFCMCNP 148 (254)
T ss_dssp TTCSSTTTSTT--CCSCCBSEEEECC
T ss_pred hhhhhhhhhhc--ccCCcccEEEECC
Confidence 754 2222210 0015899999984
No 187
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.48 E-value=3.1e-13 Score=101.28 Aligned_cols=107 Identities=21% Similarity=0.279 Sum_probs=83.7
Q ss_pred HHHHHHHHH-cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHH
Q 029803 9 QLMAMLLRL-VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 87 (187)
Q Consensus 9 ~ll~~l~~~-~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 87 (187)
.++..+... .++.+|||+|||+|..+..++.. .+++++|+++.+++.+++++...+ .+++++++|+.+..
T Consensus 22 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~--- 92 (243)
T 3d2l_A 22 EWVAWVLEQVEPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELE--- 92 (243)
T ss_dssp HHHHHHHHHSCTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCC---
T ss_pred HHHHHHHHHcCCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcC---
Confidence 344444443 35689999999999999988875 699999999999999999988765 35899999986531
Q ss_pred hhcccCCCceeEEEEeCC-------CcccHHHHHHHHhccCCCeEEEEe
Q 029803 88 LKYSENEGSFDYAFVDAD-------KDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 88 ~~~~~~~~~~D~i~~d~~-------~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
..++||+|++... ......+++++.++|+|||.++++
T Consensus 93 -----~~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 93 -----LPEPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp -----CSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----CCCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 1368999998641 134456889999999999999984
No 188
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.48 E-value=3.8e-14 Score=105.74 Aligned_cols=93 Identities=14% Similarity=0.076 Sum_probs=76.9
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC-CC
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN-EG 95 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~ 95 (187)
..++.+|||+|||+|..+..++.. +.+|+++|+++.+++.++++ ..+++++++|+.+.++. . .+
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~d~~~~~~~------~~~~ 110 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARAN------APHADVYEWNGKGELPA------GLGA 110 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHH------CTTSEEEECCSCSSCCT------TCCC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHh------CCCceEEEcchhhccCC------cCCC
Confidence 357789999999999999999986 56999999999999999988 23689999998543221 2 47
Q ss_pred ceeEEEEeCCCcccHHHHHHHHhccCCCeEEE
Q 029803 96 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAV 127 (187)
Q Consensus 96 ~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv 127 (187)
+||+|++.. ....+++++.++|+|||.++
T Consensus 111 ~fD~v~~~~---~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 111 PFGLIVSRR---GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp CEEEEEEES---CCSGGGGGHHHHEEEEEEEE
T ss_pred CEEEEEeCC---CHHHHHHHHHHHcCCCcEEE
Confidence 899999973 45567888999999999998
No 189
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.48 E-value=7.3e-14 Score=104.09 Aligned_cols=105 Identities=23% Similarity=0.305 Sum_probs=84.5
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCC----CcEEEEEcchHHHHHHHhhccc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD----HKINFIESEALSVLDQLLKYSE 92 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~ 92 (187)
..++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++...++. .++++..+|+.+. + .
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~-~------~ 97 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSL-S------F 97 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSC-C------S
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEeccccc-C------C
Confidence 346789999999999999999986 569999999999999999998776652 3689999998653 1 1
Q ss_pred CCCceeEEEEeCCCc---c---cHHHHHHHHhccCCCeEEEEeCC
Q 029803 93 NEGSFDYAFVDADKD---N---YCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 93 ~~~~~D~i~~d~~~~---~---~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
..++||+|++..... + ...+++++.++|+|||++++.+.
T Consensus 98 ~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 98 HDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp CTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 257899999875322 2 23789999999999999998654
No 190
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.47 E-value=6e-13 Score=105.79 Aligned_cols=106 Identities=13% Similarity=0.084 Sum_probs=88.4
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++.+|||||||+|..+..+++..| +.+++++|+ +.+++.+++++...++.++++++.+|+.+. . ...
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~-------~~~ 256 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFP-ELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKE--S-------YPE 256 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTS--C-------CCC
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCC-CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccC--C-------CCC
Confidence 45678999999999999999999987 789999999 999999999999888888899999998753 1 134
Q ss_pred eeEEEEeCCC-----cccHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 97 FDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 97 ~D~i~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
+|+|++.... +....+++++.+.|+|||.+++.+...
T Consensus 257 ~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 257 ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 4999987532 225678999999999999998766554
No 191
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.47 E-value=7.7e-14 Score=105.36 Aligned_cols=103 Identities=8% Similarity=0.101 Sum_probs=83.1
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++.+|||||||+|..+..++... ..+++++|+++.+++.+++++... .+++++++|+.+. + ...++
T Consensus 91 ~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~-~------~~~~~ 158 (254)
T 1xtp_A 91 GHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETA-T------LPPNT 158 (254)
T ss_dssp TCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGC-C------CCSSC
T ss_pred ccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHC-C------CCCCC
Confidence 3467899999999999999988764 358999999999999999987543 4699999998653 1 12468
Q ss_pred eeEEEEeCCC-----cccHHHHHHHHhccCCCeEEEEeCC
Q 029803 97 FDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 97 ~D~i~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
||+|++.... .....+++++.++|+|||++++.+.
T Consensus 159 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 159 YDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 9999987532 2356789999999999999999764
No 192
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.47 E-value=1.4e-13 Score=101.36 Aligned_cols=97 Identities=16% Similarity=0.115 Sum_probs=79.1
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++ ++++..+|+.+.. ..++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~--------~~~~ 102 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL-------GRPVRTMLFHQLD--------AIDA 102 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCC--------CCSC
T ss_pred cCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc-------CCceEEeeeccCC--------CCCc
Confidence 456789999999999999999986 569999999999999999887 3567788876532 2579
Q ss_pred eeEEEEeCCC-----cccHHHHHHHHhccCCCeEEEEeCC
Q 029803 97 FDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 97 ~D~i~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
||+|++.... +....+++++.++|+|||++++...
T Consensus 103 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 142 (211)
T 3e23_A 103 YDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYK 142 (211)
T ss_dssp EEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 9999987532 2456789999999999999998643
No 193
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.47 E-value=6.2e-13 Score=95.04 Aligned_cols=103 Identities=16% Similarity=0.138 Sum_probs=79.1
Q ss_pred cHHHHHHHHHHHHH--cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchH
Q 029803 4 LTIHGQLMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEAL 81 (187)
Q Consensus 4 ~~~~~~ll~~l~~~--~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 81 (187)
.+.+..++.. +.. .++.+|||+|||+|..+..+++. . +|+++|+++.+++. .++++++++|+.
T Consensus 7 ~~~~~~l~~~-l~~~~~~~~~vLD~GcG~G~~~~~l~~~---~-~v~gvD~s~~~~~~----------~~~~~~~~~d~~ 71 (170)
T 3q87_B 7 GEDTYTLMDA-LEREGLEMKIVLDLGTSTGVITEQLRKR---N-TVVSTDLNIRALES----------HRGGNLVRADLL 71 (170)
T ss_dssp CHHHHHHHHH-HHHHTCCSCEEEEETCTTCHHHHHHTTT---S-EEEEEESCHHHHHT----------CSSSCEEECSTT
T ss_pred CccHHHHHHH-HHhhcCCCCeEEEeccCccHHHHHHHhc---C-cEEEEECCHHHHhc----------ccCCeEEECChh
Confidence 4555666666 455 67889999999999999999875 3 99999999999886 346889999987
Q ss_pred HHHHHHhhcccCCCceeEEEEeCCCc------------ccHHHHHHHHhccCCCeEEEEeC
Q 029803 82 SVLDQLLKYSENEGSFDYAFVDADKD------------NYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 82 ~~~~~~~~~~~~~~~~D~i~~d~~~~------------~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
+.++ .++||+|+++.... .....++.+.+.+ |||.+++..
T Consensus 72 ~~~~--------~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 72 CSIN--------QESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLV 123 (170)
T ss_dssp TTBC--------GGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEE
T ss_pred hhcc--------cCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEE
Confidence 6321 36899999975321 2356778888888 999998853
No 194
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.47 E-value=6.7e-14 Score=104.59 Aligned_cols=103 Identities=16% Similarity=0.133 Sum_probs=78.8
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCC-cchHHHH---HHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVN-RETYEIG---LPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 93 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~-~~~~~~a---~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 93 (187)
.++.+|||||||+|..+..++...+ +.+|+++|++ +.+++.| +++....++. ++++.++|+.+....+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~-~v~~~~~d~~~l~~~~------ 94 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQ-NTFYIGIDPVKENLFDISKKIIKKPSKGGLS-NVVFVIAAAESLPFEL------ 94 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCT-TEEEEEECSCCGGGHHHHHHHTSCGGGTCCS-SEEEECCBTTBCCGGG------
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC-CeEEEEcCHHHhhhhc------
Confidence 4677999999999999999997655 7899999999 5555555 7777777765 5999999987641111
Q ss_pred CCceeEEEEeCCCc--------ccHHHHHHHHhccCCCeEEEE
Q 029803 94 EGSFDYAFVDADKD--------NYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 94 ~~~~D~i~~d~~~~--------~~~~~~~~~~~~L~~gG~lv~ 128 (187)
...+|.|++..... ....+++++.++|||||.+++
T Consensus 95 ~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 95 KNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp TTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred cCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 25678887764221 235678999999999999998
No 195
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.47 E-value=8.2e-14 Score=104.47 Aligned_cols=108 Identities=14% Similarity=0.217 Sum_probs=84.7
Q ss_pred HHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhh
Q 029803 10 LMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLK 89 (187)
Q Consensus 10 ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 89 (187)
.+..++...++.+|||||||+|..+..++.. . ..+++++|+++.+++.+++++.. .+++++++|+.+.. +
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~--~-- 103 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH-G-ASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLH--L-- 103 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCC--C--
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHC-C-CCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhcc--C--
Confidence 3444445557889999999999999999886 2 23999999999999999987532 36899999987531 1
Q ss_pred cccCCCceeEEEEeCC---CcccHHHHHHHHhccCCCeEEEEeC
Q 029803 90 YSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 90 ~~~~~~~~D~i~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
..++||+|++... ......+++++.++|+|||.+++..
T Consensus 104 ---~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 104 ---PQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp ---CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---CCCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 2478999998753 2356788999999999999999854
No 196
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.47 E-value=1.7e-13 Score=105.26 Aligned_cols=100 Identities=17% Similarity=0.112 Sum_probs=81.7
Q ss_pred HHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 15 LRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 15 ~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
+...++.+|||||||+|..+..++. + +.+|+++|+++.+++.+++++ .++++..+|+.+. + ..
T Consensus 53 l~~~~~~~vLDiGcG~G~~~~~l~~--~-~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~-------~~ 115 (279)
T 3ccf_A 53 LNPQPGEFILDLGCGTGQLTEKIAQ--S-GAEVLGTDNAATMIEKARQNY------PHLHFDVADARNF-R-------VD 115 (279)
T ss_dssp HCCCTTCEEEEETCTTSHHHHHHHH--T-TCEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTC-C-------CS
T ss_pred hCCCCCCEEEEecCCCCHHHHHHHh--C-CCeEEEEECCHHHHHHHHhhC------CCCEEEECChhhC-C-------cC
Confidence 3455778999999999999999998 3 789999999999999998875 3588899998652 1 14
Q ss_pred CceeEEEEeCCC---cccHHHHHHHHhccCCCeEEEEeCC
Q 029803 95 GSFDYAFVDADK---DNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 95 ~~~D~i~~d~~~---~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
++||+|++.... .+...+++++.++|+|||.+++...
T Consensus 116 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 116 KPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp SCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEec
Confidence 689999987532 4567889999999999999998543
No 197
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.46 E-value=9.9e-13 Score=101.68 Aligned_cols=109 Identities=13% Similarity=0.103 Sum_probs=76.8
Q ss_pred CCCEEEEEcccccHHHHHHH----hhCCCCCEE--EEEeCCcchHHHHHHHHHhc-CCCC-cEEEEEcchHHHHHHHhhc
Q 029803 19 NAKKTIEIGVFTGYSLLLTA----LTIPEDGQI--TAIDVNRETYEIGLPIIKKA-GVDH-KINFIESEALSVLDQLLKY 90 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la----~~~~~~~~v--~~iD~~~~~~~~a~~~~~~~-~~~~-~~~~~~~d~~~~~~~~~~~ 90 (187)
++.+|||||||+|..+..++ ...+ ..++ +++|++++|++.+++++... +..+ ++.+..+++.+....+. .
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~-~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~ 129 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYP-GVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRML-E 129 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHST-TCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHH-T
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCC-CceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhc-c
Confidence 45689999999998765443 3333 5654 99999999999999998754 3332 23445677665432210 0
Q ss_pred ccCCCceeEEEEeC---CCcccHHHHHHHHhccCCCeEEEEe
Q 029803 91 SENEGSFDYAFVDA---DKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 91 ~~~~~~~D~i~~d~---~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+...++||+|++.. +..+....++++.++|||||.+++.
T Consensus 130 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 130 KKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp TTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEE
T ss_pred ccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEE
Confidence 01247899999875 3455678999999999999999985
No 198
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.45 E-value=1.6e-13 Score=109.59 Aligned_cols=103 Identities=16% Similarity=0.153 Sum_probs=86.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.++.+|||||||+|..+..+++..+ +.+++++|+ +.+++.+++++...++.++++++.+|..+.+ ...|
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---------~~~~ 249 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAP-HLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPL---------PVTA 249 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC---------SCCE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC-CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcC---------CCCC
Confidence 4678999999999999999999886 789999999 9999999999998888778999999986521 2359
Q ss_pred eEEEEeCCCc-----ccHHHHHHHHhccCCCeEEEEeCC
Q 029803 98 DYAFVDADKD-----NYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 98 D~i~~d~~~~-----~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
|+|++..... ....+++++.+.|+|||.+++.+.
T Consensus 250 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 250 DVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 9999875321 224789999999999999888665
No 199
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.45 E-value=5.3e-14 Score=107.13 Aligned_cols=109 Identities=13% Similarity=0.048 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029803 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 84 (187)
Q Consensus 5 ~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 84 (187)
+...+.+...+...++.+|||||||+|..+..++. + +.+|+++|+++.+++.++++. +++++++|+.+.
T Consensus 20 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~--~-~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~- 88 (261)
T 3ege_A 20 IRIVNAIINLLNLPKGSVIADIGAGTGGYSVALAN--Q-GLFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENL- 88 (261)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT--T-TCEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSC-
T ss_pred HHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh--C-CCEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhC-
Confidence 33444444545556889999999999999999997 3 789999999999888776543 699999998652
Q ss_pred HHHhhcccCCCceeEEEEeCC---CcccHHHHHHHHhccCCCeEEEEeCC
Q 029803 85 DQLLKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~i~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
+ ...++||+|++... ..+...+++++.++|+ ||.+++.+.
T Consensus 89 ~------~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 89 A------LPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp C------SCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEE
T ss_pred C------CCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEc
Confidence 1 12479999998753 3566789999999999 997766544
No 200
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.45 E-value=3.1e-13 Score=108.15 Aligned_cols=103 Identities=14% Similarity=0.151 Sum_probs=83.2
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 98 (187)
++++|||+| |+|..+..++...+ ..+|+++|+++++++.|+++++..++. +++++++|+.+.++.. ..++||
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~-~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~-----~~~~fD 243 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGL-PKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDY-----ALHKFD 243 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTC-CSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTT-----TSSCBS
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhh-----ccCCcc
Confidence 578999999 99999999988754 579999999999999999999998876 7999999997632210 135899
Q ss_pred EEEEeCCC--cccHHHHHHHHhccCCCe-EEEEe
Q 029803 99 YAFVDADK--DNYCNYHERLMKLLKVGG-IAVYD 129 (187)
Q Consensus 99 ~i~~d~~~--~~~~~~~~~~~~~L~~gG-~lv~~ 129 (187)
+|+++... .....+++++.+.|+||| ++++.
T Consensus 244 ~Vi~~~p~~~~~~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 244 TFITDPPETLEAIRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHTBCSTTCEEEEE
T ss_pred EEEECCCCchHHHHHHHHHHHHHcccCCeEEEEE
Confidence 99998632 234678899999999999 43443
No 201
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.45 E-value=2.3e-13 Score=108.19 Aligned_cols=104 Identities=15% Similarity=0.195 Sum_probs=87.0
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.++.+|||||||+|..+..+++..+ +.+++++|+ +++++.+++++...++.++++++.+|..+.+ ...|
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---------~~~~ 250 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAP-HVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPL---------PRKA 250 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCC---------SSCE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCC-CCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCC---------CCCc
Confidence 4678999999999999999999886 789999999 9999999999998888778999999986521 2359
Q ss_pred eEEEEeCCCc-----ccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 98 DYAFVDADKD-----NYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 98 D~i~~d~~~~-----~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
|+|++..... ....+++++.+.|+|||.+++.+..
T Consensus 251 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 251 DAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 9999875321 2246899999999999999887665
No 202
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.45 E-value=2.1e-13 Score=102.24 Aligned_cols=101 Identities=14% Similarity=0.190 Sum_probs=82.1
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++.+|||||||+|..+..++.. +.+++++|+++.+++.++++. ...+++++++|+.+. + ...++
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~-~------~~~~~ 116 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSL-P------FENEQ 116 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBC-S------SCTTC
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcC-C------CCCCC
Confidence 346789999999999999999986 569999999999999998774 235699999998653 1 12579
Q ss_pred eeEEEEeCC---CcccHHHHHHHHhccCCCeEEEEeCC
Q 029803 97 FDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 97 ~D~i~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
||+|++... ......+++++.++|+|||++++...
T Consensus 117 fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 154 (242)
T 3l8d_A 117 FEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAIL 154 (242)
T ss_dssp EEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEc
Confidence 999998753 34566889999999999999998653
No 203
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.44 E-value=2.1e-13 Score=107.90 Aligned_cols=100 Identities=19% Similarity=0.211 Sum_probs=82.9
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..+..+++..+ ..+++++|+++.+++.+++++...+.. .+++.+|..+.. .++|
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~~~---------~~~f 262 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHSP-KIRLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFSEV---------KGRF 262 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHCT-TCBCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTC---------CSCE
T ss_pred CCCCeEEEecCccCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCC--CEEEEccccccc---------cCCe
Confidence 3567999999999999999999875 679999999999999999999887764 567888876531 4689
Q ss_pred eEEEEeCCCc--------ccHHHHHHHHhccCCCeEEEEe
Q 029803 98 DYAFVDADKD--------NYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 98 D~i~~d~~~~--------~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
|+|+++.... ....+++++.+.|+|||.+++.
T Consensus 263 D~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 302 (343)
T 2pjd_A 263 DMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIV 302 (343)
T ss_dssp EEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred eEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 9999975322 2456899999999999999884
No 204
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.44 E-value=5.5e-13 Score=106.71 Aligned_cols=115 Identities=22% Similarity=0.188 Sum_probs=89.4
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029803 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 83 (187)
Q Consensus 4 ~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 83 (187)
.+..+..+..+. ..++.+|||+|||+|..++.++...+ .++|+++|+++.+++.|++++..+++.+++++.++|+.+.
T Consensus 203 ~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~-~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~ 280 (373)
T 3tm4_A 203 KASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRY-SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQL 280 (373)
T ss_dssp CHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTC-CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGG
T ss_pred cHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhC
Confidence 455666666666 67788999999999999999998754 5699999999999999999999999877899999999874
Q ss_pred HHHHhhcccCCCceeEEEEeCCC-------c----ccHHHHHHHHhccCCCeEEEE
Q 029803 84 LDQLLKYSENEGSFDYAFVDADK-------D----NYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 84 ~~~~~~~~~~~~~~D~i~~d~~~-------~----~~~~~~~~~~~~L~~gG~lv~ 128 (187)
.. ..++||+|+++... . .+..+++.+.+.| .|+.+++
T Consensus 281 ~~-------~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i 328 (373)
T 3tm4_A 281 SQ-------YVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFI 328 (373)
T ss_dssp GG-------TCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEE
T ss_pred Cc-------ccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEE
Confidence 21 14789999998531 1 1356777777877 3333333
No 205
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.44 E-value=3.6e-13 Score=101.36 Aligned_cols=105 Identities=14% Similarity=0.095 Sum_probs=81.3
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHH--HHhhcccCC
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD--QLLKYSENE 94 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~~~~~ 94 (187)
..++.+|||+|||+|..+..++...+ +|+++|+++.+++.+++++. ..+++++++|+.+... .+.. .
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~~~----~ 122 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENT----AANISYRLLDGLVPEQAAQIHS----E 122 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSC----CTTEEEEECCTTCHHHHHHHHH----H
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCc----ccCceEEECccccccccccccc----c
Confidence 35667999999999999999998754 89999999999999998862 2369999999876322 1100 1
Q ss_pred CceeEEEEeCC-----CcccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 95 GSFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 95 ~~~D~i~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
.+||+|++... ......+++++.++|+|||++++.+..
T Consensus 123 ~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 123 IGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp HCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred cCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 35999998742 224568999999999999998776544
No 206
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.43 E-value=1.6e-12 Score=103.82 Aligned_cols=122 Identities=12% Similarity=0.093 Sum_probs=87.4
Q ss_pred CCcHHHHH-HHHHHHHHc--CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEc
Q 029803 2 LLLTIHGQ-LMAMLLRLV--NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES 78 (187)
Q Consensus 2 ~~~~~~~~-ll~~l~~~~--~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~ 78 (187)
++++...+ ++..+.... ++.+|||+|||+|..++.++.. ..+|+++|+++++++.|++|++.+++. +++++.+
T Consensus 193 Q~n~~~~~~l~~~~~~~~~~~~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~~-~v~~~~~ 268 (369)
T 3bt7_A 193 QPNAAMNIQMLEWALDVTKGSKGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHID-NVQIIRM 268 (369)
T ss_dssp CSBHHHHHHHHHHHHHHTTTCCSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTCC-SEEEECC
T ss_pred cCCHHHHHHHHHHHHHHhhcCCCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEC
Confidence 34444433 444444433 3578999999999999999875 469999999999999999999998885 6999999
Q ss_pred chHHHHHHHhhcc---------cCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 79 EALSVLDQLLKYS---------ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 79 d~~~~~~~~~~~~---------~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
|+.+.++.+.... ....+||+|++|+.... ..+.+.+.|+++|.+++..
T Consensus 269 d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g---~~~~~~~~l~~~g~ivyvs 326 (369)
T 3bt7_A 269 AAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSG---LDSETEKMVQAYPRILYIS 326 (369)
T ss_dssp CSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTTC---CCHHHHHHHTTSSEEEEEE
T ss_pred CHHHHHHHHhhccccccccccccccCCCCEEEECcCccc---cHHHHHHHHhCCCEEEEEE
Confidence 9998776552110 00037999999975433 2334555666888877743
No 207
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=99.43 E-value=7.5e-12 Score=94.71 Aligned_cols=149 Identities=15% Similarity=0.040 Sum_probs=103.0
Q ss_pred cCCCEEEEEcccccHHHHHHHhh------CCCCCEEEEEe-----CCcc-------------------hHHHHHHH----
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALT------IPEDGQITAID-----VNRE-------------------TYEIGLPI---- 63 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~------~~~~~~v~~iD-----~~~~-------------------~~~~a~~~---- 63 (187)
.-|..|+|+|+..|.++..++.. .....+++++| +.+. ..+..++.
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 45779999999999999987653 12368999999 3321 01112222
Q ss_pred --HHhcCC-CCcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCC-cccHHHHHHHHhccCCCeEEEEeCCCCCccccC
Q 029803 64 --IKKAGV-DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-DNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAV 139 (187)
Q Consensus 64 --~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~-~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~ 139 (187)
.+..+. .++++++.|++.+.++.+... ...+++|++++|++. ..+...++.++++|+|||+|+++|..+.+
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~dTL~~~l~~-~~~~~~dlv~ID~D~Y~~t~~~le~~~p~l~~GGvIv~DD~~~~~---- 222 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVRETVPRYLAE-NPQTVIALAYFDLDLYEPTKAVLEAIRPYLTKGSIVAFDELDNPK---- 222 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHHHHHHHHHHH-CTTCCEEEEEECCCCHHHHHHHHHHHGGGEEEEEEEEESSTTCTT----
T ss_pred hhhhhcCCCCCcEEEEEecHHHHHHHHHHh-CCCCceEEEEEcCcccchHHHHHHHHHHHhCCCcEEEEcCCCCCC----
Confidence 223454 378999999999999886543 224579999999976 45677899999999999999999975322
Q ss_pred CCCCCCCCcccchHHHHHHHHHHhhcCCCeEEEeeecCCceEEEE
Q 029803 140 PEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDGITICR 184 (187)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~~G~~~~~ 184 (187)
+. .+++.++.+..........+|+..+...++
T Consensus 223 ------------w~-G~~~A~~ef~~~~~~~i~~~p~~~~~~y~~ 254 (257)
T 3tos_A 223 ------------WP-GENIAMRKVLGLDHAPLRLLPGRPAPAYLR 254 (257)
T ss_dssp ------------CT-HHHHHHHHHTCTTSSCCEECTTCSCCEEEE
T ss_pred ------------Ch-HHHHHHHHHHhhCCCeEEEccCCCCCEEEE
Confidence 11 134444444455677888888887776543
No 208
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.43 E-value=2.5e-13 Score=100.51 Aligned_cols=104 Identities=13% Similarity=0.103 Sum_probs=78.2
Q ss_pred HHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHH----HhcCCCCcEEEEEcchHHHHHHHhhcc
Q 029803 16 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPII----KKAGVDHKINFIESEALSVLDQLLKYS 91 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~----~~~~~~~~~~~~~~d~~~~~~~~~~~~ 91 (187)
...++.+|||+|||+|..+..++...| +.+|+++|+++++++.+.++. ...++. +++++++|+.+. +.
T Consensus 24 ~~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~-~v~~~~~d~~~l-~~----- 95 (218)
T 3mq2_A 24 RSQYDDVVLDVGTGDGKHPYKVARQNP-SRLVVALDADKSRMEKISAKAAAKPAKGGLP-NLLYLWATAERL-PP----- 95 (218)
T ss_dssp HTTSSEEEEEESCTTCHHHHHHHHHCT-TEEEEEEESCGGGGHHHHHHHTSCGGGTCCT-TEEEEECCSTTC-CS-----
T ss_pred hccCCCEEEEecCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhhhhcCCC-ceEEEecchhhC-CC-----
Confidence 355778999999999999999999876 789999999999888643333 234443 699999998763 21
Q ss_pred cCCCceeEEEEeCCC--------cccHHHHHHHHhccCCCeEEEEe
Q 029803 92 ENEGSFDYAFVDADK--------DNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 92 ~~~~~~D~i~~d~~~--------~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
..+. |.+++.... .+...+++++.++|||||.+++.
T Consensus 96 -~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 96 -LSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp -CCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEE
T ss_pred -CCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEE
Confidence 1344 777755421 12267899999999999999984
No 209
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.43 E-value=7.2e-13 Score=103.39 Aligned_cols=107 Identities=13% Similarity=0.095 Sum_probs=81.8
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcC------CCCcEEEEEcchHHHH--HHHhhc
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG------VDHKINFIESEALSVL--DQLLKY 90 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~------~~~~~~~~~~d~~~~~--~~~~~~ 90 (187)
++.+|||+|||+|..+..++.. + ..+++++|+++.+++.+++++...+ ...+++++++|+.+.. ..+.
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-- 109 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG-R-INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFR-- 109 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCS--
T ss_pred CCCEEEEECCCCcHHHHHHHhc-C-CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcc--
Confidence 6789999999999999988874 3 6799999999999999999987642 2346899999987531 0010
Q ss_pred ccCCCceeEEEEeCCC-------cccHHHHHHHHhccCCCeEEEEeC
Q 029803 91 SENEGSFDYAFVDADK-------DNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 91 ~~~~~~~D~i~~d~~~-------~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
...++||+|++.... +....+++++.++|+|||++++..
T Consensus 110 -~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 110 -DPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp -STTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred -cCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 013589999987533 223578999999999999999853
No 210
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.43 E-value=1.2e-12 Score=106.38 Aligned_cols=112 Identities=20% Similarity=0.173 Sum_probs=86.7
Q ss_pred CcHHHH-HHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchH
Q 029803 3 LLTIHG-QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEAL 81 (187)
Q Consensus 3 ~~~~~~-~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 81 (187)
.++... .++..+....++.+|||+|||+|..++.+++. ..+|+++|+++++++.|+++++.+++. ++++.+|+.
T Consensus 273 ~n~~~~e~l~~~~~~~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~ 347 (425)
T 2jjq_A 273 TNSYQAVNLVRKVSELVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDR 347 (425)
T ss_dssp SBHHHHHHHHHHHHHHCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTT
T ss_pred cCHHHHHHHHHHhhccCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChH
Confidence 344444 34444444667789999999999999999985 469999999999999999999988875 999999997
Q ss_pred HHHHHHhhcccCCCceeEEEEeCCCcccHH-HHHHHHhccCCCeEEEEe
Q 029803 82 SVLDQLLKYSENEGSFDYAFVDADKDNYCN-YHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 82 ~~~~~~~~~~~~~~~~D~i~~d~~~~~~~~-~~~~~~~~L~~gG~lv~~ 129 (187)
+.+ ..+||+|++|........ +++.+ ..|+|+|++++.
T Consensus 348 ~~~---------~~~fD~Vv~dPPr~g~~~~~~~~l-~~l~p~givyvs 386 (425)
T 2jjq_A 348 EVS---------VKGFDTVIVDPPRAGLHPRLVKRL-NREKPGVIVYVS 386 (425)
T ss_dssp TCC---------CTTCSEEEECCCTTCSCHHHHHHH-HHHCCSEEEEEE
T ss_pred HcC---------ccCCCEEEEcCCccchHHHHHHHH-HhcCCCcEEEEE
Confidence 642 137999999976544433 55544 469999999885
No 211
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.43 E-value=2.9e-12 Score=98.40 Aligned_cols=110 Identities=10% Similarity=0.053 Sum_probs=82.6
Q ss_pred CCCEEEEEcccc---cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHH-----hhc
Q 029803 19 NAKKTIEIGVFT---GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL-----LKY 90 (187)
Q Consensus 19 ~~~~vLeiG~g~---G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-----~~~ 90 (187)
...+|||||||+ |..+..++...+ +.+|+++|++|.+++.+++++.. ..+++++++|+.+....+ ...
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p-~~~v~~vD~sp~~l~~Ar~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~ 152 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNP-DARVVYVDIDPMVLTHGRALLAK---DPNTAVFTADVRDPEYILNHPDVRRM 152 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCT-TCEEEEEESSHHHHHHHHHHHTT---CTTEEEEECCTTCHHHHHHSHHHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCC-CCEEEEEECChHHHHHHHHhcCC---CCCeEEEEeeCCCchhhhccchhhcc
Confidence 457999999999 988776666655 78999999999999999998843 357999999986531100 000
Q ss_pred ccCCCceeEEEEeCC-----CcccHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 91 SENEGSFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 91 ~~~~~~~D~i~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
....+||+|++... .......++++.+.|+|||++++.+...
T Consensus 153 -~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 153 -IDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp -CCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred -CCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 11258999998642 1236789999999999999999977653
No 212
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.43 E-value=1.4e-13 Score=104.53 Aligned_cols=110 Identities=21% Similarity=0.117 Sum_probs=81.5
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCC----------------------------
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGV---------------------------- 69 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~---------------------------- 69 (187)
.++.+|||+|||+|..+..++.... .+|+++|+++.+++.+++++...+.
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 4567899999999999988876522 4899999999999999998764321
Q ss_pred CCcE-EEEEcchHHHHHHHhhcccCCCceeEEEEeCCCc-------ccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 70 DHKI-NFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-------NYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 70 ~~~~-~~~~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~~-------~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
..++ ++.++|+.+..+.. . ...++||+|++..... ....+++++.++|+|||++++.+..
T Consensus 133 ~~~v~~~~~~d~~~~~~~~-~--~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLG-G--VSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp HHHEEEEEECCTTSSSTTT-T--CCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred hhhheeEEEeeeccCCCCC-c--cccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 0127 89999986532110 0 0126899999875322 4667899999999999999997644
No 213
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.43 E-value=3.9e-13 Score=95.55 Aligned_cols=99 Identities=16% Similarity=0.147 Sum_probs=75.2
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH-----HHHHhhcc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV-----LDQLLKYS 91 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~~~ 91 (187)
..++.+|||+|||+|..+..+++.++++.+++++|+++ +++. .+++++.+|+.+. ++...
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~--- 84 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELVMKALLERV--- 84 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHHHHHHHHHH---
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchhhhhhhccC---
Confidence 45678999999999999999999864468999999999 6532 4689999998653 11111
Q ss_pred cCCCceeEEEEeCCCc---cc-----------HHHHHHHHhccCCCeEEEEeCC
Q 029803 92 ENEGSFDYAFVDADKD---NY-----------CNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 92 ~~~~~~D~i~~d~~~~---~~-----------~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
..++||+|+++.... .. ..+++.+.++|+|||.+++...
T Consensus 85 -~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (180)
T 1ej0_A 85 -GDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF 137 (180)
T ss_dssp -TTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -CCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 246899999975321 11 5788999999999999998543
No 214
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.43 E-value=8.3e-13 Score=98.72 Aligned_cols=99 Identities=10% Similarity=0.121 Sum_probs=79.5
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..+..+++.. .+++++|+++.+++.+++++ .+++++++|+.+.. ..++|
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~--------~~~~~ 101 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRL------PDATLHQGDMRDFR--------LGRKF 101 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCC--------CSSCE
T ss_pred CCCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHcc--------cCCCC
Confidence 467899999999999999999874 39999999999999999874 25889999986531 13689
Q ss_pred eEEEEeCC----C---cccHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 98 DYAFVDAD----K---DNYCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 98 D~i~~d~~----~---~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
|+|++... . .....+++++.++|+|||.+++.+...
T Consensus 102 D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 102 SAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp EEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred cEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 99996432 1 344678999999999999999976443
No 215
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.43 E-value=2.2e-13 Score=103.74 Aligned_cols=102 Identities=15% Similarity=0.180 Sum_probs=73.7
Q ss_pred HHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 15 LRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 15 ~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
+...++.+|||||||+|..+..+++. +.+|+++|+++.+++.+++++.... -...+...+.. ....+ .
T Consensus 41 l~l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~~--v~~~~~~~~~~-~~~~~------~ 108 (261)
T 3iv6_A 41 ENIVPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADRC--VTIDLLDITAE-IPKEL------A 108 (261)
T ss_dssp TTCCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSSC--CEEEECCTTSC-CCGGG------T
T ss_pred cCCCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhcc--ceeeeeecccc-ccccc------C
Confidence 34567789999999999999999985 5799999999999999999875431 11222222210 00111 4
Q ss_pred CceeEEEEeCCC-----cccHHHHHHHHhccCCCeEEEEe
Q 029803 95 GSFDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 95 ~~~D~i~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
++||+|+++... +.....++.+.++| |||.+++.
T Consensus 109 ~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 109 GHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp TCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred CCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence 689999998532 23456788888999 99999885
No 216
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.42 E-value=7.4e-13 Score=109.12 Aligned_cols=101 Identities=16% Similarity=0.170 Sum_probs=82.9
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++.+|||||||+|..+..+++. + ..+|+++|+++ +++.|++++..+++.++++++++|+.+. .+ .++
T Consensus 156 ~~~~~~VLDiGcGtG~la~~la~~-~-~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~--~~------~~~ 224 (480)
T 3b3j_A 156 DFKDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEV--SL------PEQ 224 (480)
T ss_dssp GTTTCEEEEESCSTTHHHHHHHHT-T-CSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTC--CC------SSC
T ss_pred hcCCCEEEEecCcccHHHHHHHHc-C-CCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhC--cc------CCC
Confidence 346789999999999999988874 3 57999999998 9999999999999888899999998763 11 368
Q ss_pred eeEEEEeCC-----CcccHHHHHHHHhccCCCeEEEE
Q 029803 97 FDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 97 ~D~i~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
||+|++... .+.....+..+.+.|+|||++++
T Consensus 225 fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 225 VDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp EEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred eEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 999998642 23445667778899999999985
No 217
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.42 E-value=7e-13 Score=102.12 Aligned_cols=107 Identities=18% Similarity=0.207 Sum_probs=88.8
Q ss_pred HHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcC----CCCcEEEEEcchHHHHHHHhhcc
Q 029803 16 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG----VDHKINFIESEALSVLDQLLKYS 91 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~ 91 (187)
...+|++||-||.|.|..+.++++..+ ..+|+.+|+++..++.+++.+.... -.++++++.+|+..++..
T Consensus 80 ~~p~pk~VLIiGgGdG~~~revlk~~~-v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~----- 153 (294)
T 3o4f_A 80 AHGHAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ----- 153 (294)
T ss_dssp HSSCCCEEEEESCTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSC-----
T ss_pred hCCCCCeEEEECCCchHHHHHHHHcCC-cceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhh-----
Confidence 356889999999999999999998754 6799999999999999999986421 146899999999987654
Q ss_pred cCCCceeEEEEeCCCc-------ccHHHHHHHHhccCCCeEEEEe
Q 029803 92 ENEGSFDYAFVDADKD-------NYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 92 ~~~~~~D~i~~d~~~~-------~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
..++||+|++|.... ...++++.+.+.|+|||+++..
T Consensus 154 -~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 154 -TSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp -SSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEE
T ss_pred -ccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEe
Confidence 257899999996321 2357999999999999999985
No 218
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.41 E-value=3.5e-12 Score=98.28 Aligned_cols=104 Identities=15% Similarity=0.115 Sum_probs=74.8
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeC-CcchHHHHHHHH-----HhcCCC----CcEEEEEcch----HHH
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDV-NRETYEIGLPII-----KKAGVD----HKINFIESEA----LSV 83 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~-~~~~~~~a~~~~-----~~~~~~----~~~~~~~~d~----~~~ 83 (187)
.++++|||+|||+|..++.++.. . ..+|+++|+ ++++++.+++++ +..++. +++++...+. .+.
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~-~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 155 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLA-G-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSL 155 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHT-T-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHH
T ss_pred cCCCeEEEecccccHHHHHHHHc-C-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHH
Confidence 47789999999999999988875 2 359999999 899999999999 544543 3677775442 222
Q ss_pred HHHHhhcccCCCceeEEEE-eC--CCcccHHHHHHHHhccC---C--CeEEEE
Q 029803 84 LDQLLKYSENEGSFDYAFV-DA--DKDNYCNYHERLMKLLK---V--GGIAVY 128 (187)
Q Consensus 84 ~~~~~~~~~~~~~~D~i~~-d~--~~~~~~~~~~~~~~~L~---~--gG~lv~ 128 (187)
...+ ..++||+|++ |. .......+++.+.++|+ | ||.+++
T Consensus 156 ~~~~-----~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 156 QRCT-----GLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp HHHH-----SCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred Hhhc-----cCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 2211 1478999987 42 24456788999999999 9 997655
No 219
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.41 E-value=8.9e-13 Score=95.25 Aligned_cols=104 Identities=13% Similarity=0.119 Sum_probs=81.6
Q ss_pred HHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHh
Q 029803 9 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLL 88 (187)
Q Consensus 9 ~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 88 (187)
.++..+ ..++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++ .+++++++|+.+. + +
T Consensus 38 ~~l~~~--~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~------~~~~~~~~d~~~~-~-~- 103 (195)
T 3cgg_A 38 RLIDAM--APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDF------PEARWVVGDLSVD-Q-I- 103 (195)
T ss_dssp HHHHHH--SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC------TTSEEEECCTTTS-C-C-
T ss_pred HHHHHh--ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhC------CCCcEEEcccccC-C-C-
Confidence 445444 357789999999999999999886 569999999999999999875 2488899998653 1 1
Q ss_pred hcccCCCceeEEEEeCC-C-----cccHHHHHHHHhccCCCeEEEEeC
Q 029803 89 KYSENEGSFDYAFVDAD-K-----DNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 89 ~~~~~~~~~D~i~~d~~-~-----~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
..++||+|++.+. . +....+++.+.++|+|||.+++..
T Consensus 104 ----~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~ 147 (195)
T 3cgg_A 104 ----SETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGF 147 (195)
T ss_dssp ----CCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----CCCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 2468999999732 1 234678999999999999999854
No 220
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.41 E-value=2.1e-13 Score=100.37 Aligned_cols=96 Identities=17% Similarity=0.185 Sum_probs=76.8
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 98 (187)
++.+|||+|||+|..+..+ + ..+++++|+++.+++.+++++ .+++++++|+.+. + ...++||
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~-~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~------~~~~~fD 97 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----P-YPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEAL-P------FPGESFD 97 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----C-CSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSC-C------SCSSCEE
T ss_pred CCCeEEEECCCCCHhHHhC----C-CCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccC-C------CCCCcEE
Confidence 6789999999999988766 2 239999999999999999875 3588899987652 1 1246899
Q ss_pred EEEEeCC---CcccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 99 YAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 99 ~i~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
+|++... ..+...+++++.++|+|||.+++....
T Consensus 98 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 98 VVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp EEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecC
Confidence 9998753 345678899999999999999986543
No 221
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.40 E-value=7.3e-12 Score=91.79 Aligned_cols=109 Identities=9% Similarity=0.070 Sum_probs=82.8
Q ss_pred cHHHHHHHHHHHH---HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcch
Q 029803 4 LTIHGQLMAMLLR---LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 80 (187)
Q Consensus 4 ~~~~~~ll~~l~~---~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 80 (187)
++...+.+...+. ..++.+|||+|||+|..+..++... ..+++++|+++.+++.+++++...++ +++++++|+
T Consensus 31 ~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~ 106 (207)
T 1wy7_A 31 PGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLG--AKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDV 106 (207)
T ss_dssp CHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCG
T ss_pred chHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECch
Confidence 3444444444443 3367899999999999999998862 35899999999999999999988776 699999998
Q ss_pred HHHHHHHhhcccCCCceeEEEEeCCC-----cccHHHHHHHHhccCCCeEEEE
Q 029803 81 LSVLDQLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 81 ~~~~~~~~~~~~~~~~~D~i~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
.+. .++||+|+++... .....+++.+.+.+ |+++++
T Consensus 107 ~~~----------~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~ 147 (207)
T 1wy7_A 107 SEF----------NSRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSI 147 (207)
T ss_dssp GGC----------CCCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEE
T ss_pred HHc----------CCCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEEE
Confidence 763 2589999998631 23457788888888 665554
No 222
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.40 E-value=1.8e-13 Score=100.61 Aligned_cols=102 Identities=11% Similarity=0.070 Sum_probs=80.7
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..+..++...+ .+++++|+++.+++.+++++.. ..+++++++|+.+. + + ..++|
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~~---~~~i~~~~~d~~~~-~-~-----~~~~f 108 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGF--PNVTSVDYSSVVVAAMQACYAH---VPQLRWETMDVRKL-D-F-----PSASF 108 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTC--CCEEEEESCHHHHHHHHHHTTT---CTTCEEEECCTTSC-C-S-----CSSCE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCC--CcEEEEeCCHHHHHHHHHhccc---CCCcEEEEcchhcC-C-C-----CCCcc
Confidence 5678999999999999999998643 3899999999999999998753 24689999998653 1 1 24689
Q ss_pred eEEEEeCC------------------CcccHHHHHHHHhccCCCeEEEEeCC
Q 029803 98 DYAFVDAD------------------KDNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 98 D~i~~d~~------------------~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
|+|++... ......+++++.++|+|||.+++.+.
T Consensus 109 D~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 109 DVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp EEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred cEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 99997632 12346789999999999999998643
No 223
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.37 E-value=1.6e-12 Score=99.10 Aligned_cols=95 Identities=18% Similarity=0.210 Sum_probs=76.9
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.++.+|||||||+|..+..++..++ +.+++++|+++.+++.++++. .++.+..+|+.+. + ...++|
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~------~~~~~f 149 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP-EITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRL-P------FSDTSM 149 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT-TSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSC-S------BCTTCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhC-C------CCCCce
Confidence 4678999999999999999999875 689999999999999998764 3578889887542 1 124689
Q ss_pred eEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 98 DYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 98 D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
|+|++.... ..++++.++|+|||.+++..
T Consensus 150 D~v~~~~~~----~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 150 DAIIRIYAP----CKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp EEEEEESCC----CCHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEeCCh----hhHHHHHHhcCCCcEEEEEE
Confidence 999986543 35788899999999998854
No 224
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.37 E-value=6.7e-12 Score=91.64 Aligned_cols=91 Identities=14% Similarity=0.185 Sum_probs=72.2
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 98 (187)
++.+|||+|||+|..+..++.. + ..+++++|+++.+++.+++++. +++++++|+.+. .++||
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~----------~~~~D 112 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLL-G-AESVTAFDIDPDAIETAKRNCG------GVNFMVADVSEI----------SGKYD 112 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHT-T-BSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGGC----------CCCEE
T ss_pred CCCEEEEEeCCccHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHHC----------CCCee
Confidence 6789999999999999999876 3 4589999999999999999864 589999998763 26899
Q ss_pred EEEEeCCC-----cccHHHHHHHHhccCCCeEEEEe
Q 029803 99 YAFVDADK-----DNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 99 ~i~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+|+++... .....+++.+.+.+ |+++++.
T Consensus 113 ~v~~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~~ 146 (200)
T 1ne2_A 113 TWIMNPPFGSVVKHSDRAFIDKAFETS--MWIYSIG 146 (200)
T ss_dssp EEEECCCC-------CHHHHHHHHHHE--EEEEEEE
T ss_pred EEEECCCchhccCchhHHHHHHHHHhc--CcEEEEE
Confidence 99998642 22356788888887 5555543
No 225
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.36 E-value=8.9e-13 Score=100.24 Aligned_cols=95 Identities=17% Similarity=0.206 Sum_probs=76.0
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 98 (187)
++.+|||||||+|..+..++.. +.+++++|+++.+++.++++.. .+ ++.+|+.+. + ...++||
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~-----~~--~~~~d~~~~-~------~~~~~fD 116 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGV-----KN--VVEAKAEDL-P------FPSGAFE 116 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTC-----SC--EEECCTTSC-C------SCTTCEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcC-----CC--EEECcHHHC-C------CCCCCEE
Confidence 6789999999999999999875 5699999999999999998753 12 778887542 1 1247899
Q ss_pred EEEEeCC----CcccHHHHHHHHhccCCCeEEEEeC
Q 029803 99 YAFVDAD----KDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 99 ~i~~d~~----~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
+|++... ..+...+++++.++|+|||.+++..
T Consensus 117 ~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 117 AVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp EEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEe
Confidence 9998642 2346788999999999999999853
No 226
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.36 E-value=1.1e-11 Score=98.34 Aligned_cols=106 Identities=17% Similarity=0.115 Sum_probs=84.5
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..+..+|||||||+|..+..+++..| +.+++..|. |+.++.++++++..+ .++++++.+|.++. ....
T Consensus 177 ~~~~~~v~DvGgG~G~~~~~l~~~~p-~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~---------~~~~ 244 (353)
T 4a6d_A 177 LSVFPLMCDLGGGAGALAKECMSLYP-GCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKD---------PLPE 244 (353)
T ss_dssp GGGCSEEEEETCTTSHHHHHHHHHCS-SCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTS---------CCCC
T ss_pred cccCCeEEeeCCCCCHHHHHHHHhCC-CceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccC---------CCCC
Confidence 45668999999999999999999998 889999997 889999998876544 57899999998642 1356
Q ss_pred eeEEEEeCC-----CcccHHHHHHHHhccCCCeEEEEeCCCCC
Q 029803 97 FDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTLWG 134 (187)
Q Consensus 97 ~D~i~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
+|++++..- .+....+++++.+.|+|||.+++.+....
T Consensus 245 ~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~ 287 (353)
T 4a6d_A 245 ADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLD 287 (353)
T ss_dssp CSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCC
T ss_pred ceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeC
Confidence 899988642 22345679999999999998888776643
No 227
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.36 E-value=1.9e-13 Score=104.24 Aligned_cols=110 Identities=22% Similarity=0.099 Sum_probs=76.9
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCC---------------------------
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD--------------------------- 70 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~--------------------------- 70 (187)
.++.+|||||||+|..+..++... ..+|+++|+|+.+++.|+++++.....
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~--~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDS--FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhh--hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 356789999999997766555431 247999999999999999987653210
Q ss_pred -CcEE-EEEcchHHHHHHHhhcccCCCceeEEEEeCC-------CcccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 71 -HKIN-FIESEALSVLDQLLKYSENEGSFDYAFVDAD-------KDNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 71 -~~~~-~~~~d~~~~~~~~~~~~~~~~~~D~i~~d~~-------~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
.++. ++++|+.+..+ +.. ...++||+|++... .+.+...++++.++|||||.+++.+..
T Consensus 132 ~~~i~~~~~~D~~~~~~-~~~--~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNP-LAP--AVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp HHHEEEEEECCTTSSST-TTT--CCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred HhhhheEEeccccCCCC-CCc--cccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 1233 78888765211 000 01368999998742 134467889999999999999997644
No 228
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.36 E-value=4.4e-12 Score=103.37 Aligned_cols=115 Identities=12% Similarity=0.146 Sum_probs=87.5
Q ss_pred HHHHHHHHHHH---cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029803 7 HGQLMAMLLRL---VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 83 (187)
Q Consensus 7 ~~~ll~~l~~~---~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 83 (187)
...++..++.. .++.+|||+|||+|..++.++.. ..+|+++|+++++++.|++|++.+++. +++++++|+.+.
T Consensus 271 ~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~~d~~~~ 346 (433)
T 1uwv_A 271 NQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQ-NVTFYHENLEED 346 (433)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCTTSC
T ss_pred HHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEECCHHHH
Confidence 34444544443 35679999999999999999986 579999999999999999999988876 699999999774
Q ss_pred HHHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEe
Q 029803 84 LDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 84 ~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
++.+. ...++||+|++|.........++.+. .++|++++.++
T Consensus 347 l~~~~---~~~~~fD~Vv~dPPr~g~~~~~~~l~-~~~p~~ivyvs 388 (433)
T 1uwv_A 347 VTKQP---WAKNGFDKVLLDPARAGAAGVMQQII-KLEPIRIVYVS 388 (433)
T ss_dssp CSSSG---GGTTCCSEEEECCCTTCCHHHHHHHH-HHCCSEEEEEE
T ss_pred hhhhh---hhcCCCCEEEECCCCccHHHHHHHHH-hcCCCeEEEEE
Confidence 33210 01358999999976655556655554 47898888774
No 229
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.35 E-value=3.9e-12 Score=96.70 Aligned_cols=108 Identities=17% Similarity=0.117 Sum_probs=79.4
Q ss_pred CCCEEEEEcccccHHHHHHHhh-------CCC----CCEEEEEeCCc--------------chHHHHHHHHHhcC-----
Q 029803 19 NAKKTIEIGVFTGYSLLLTALT-------IPE----DGQITAIDVNR--------------ETYEIGLPIIKKAG----- 68 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~-------~~~----~~~v~~iD~~~--------------~~~~~a~~~~~~~~----- 68 (187)
++.+|||||+|+|++++.++.. .|. ..+++++|..| +..+.+++.++.+.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4578999999999999987765 342 25899999887 44456777776521
Q ss_pred -----CC---CcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCCc--c----cHHHHHHHHhccCCCeEEEE
Q 029803 69 -----VD---HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--N----YCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 69 -----~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~~--~----~~~~~~~~~~~L~~gG~lv~ 128 (187)
+. .+++++.+|+.+.++.+... ...+||+||+|+..+ + ...+++.+.++|+|||+++.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~--~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDS--LNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGG--GTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccc--cCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 11 35789999999987764110 013799999997322 2 57799999999999999986
No 230
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.34 E-value=5.9e-12 Score=97.21 Aligned_cols=92 Identities=12% Similarity=0.059 Sum_probs=71.9
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029803 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 83 (187)
Q Consensus 4 ~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 83 (187)
.+.....+...+...++.+|||||||+|..+..++.. ..+|+++|+++.+++.+++++...+..++++++++|+.+.
T Consensus 13 d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~ 89 (285)
T 1zq9_A 13 NPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK---AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT 89 (285)
T ss_dssp CHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH---SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh---CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc
Confidence 3444444444445567789999999999999999987 4599999999999999999987766656799999998753
Q ss_pred HHHHhhcccCCCceeEEEEeCCCc
Q 029803 84 LDQLLKYSENEGSFDYAFVDADKD 107 (187)
Q Consensus 84 ~~~~~~~~~~~~~~D~i~~d~~~~ 107 (187)
. ..+||+|+++....
T Consensus 90 --~-------~~~fD~vv~nlpy~ 104 (285)
T 1zq9_A 90 --D-------LPFFDTCVANLPYQ 104 (285)
T ss_dssp --C-------CCCCSEEEEECCGG
T ss_pred --c-------chhhcEEEEecCcc
Confidence 1 25799999976443
No 231
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.33 E-value=1.8e-12 Score=100.02 Aligned_cols=110 Identities=15% Similarity=0.028 Sum_probs=74.5
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcC-----------------CC-----------
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG-----------------VD----------- 70 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~-----------------~~----------- 70 (187)
++.+|||||||+|..+..++.. + ..+|+++|+++.+++.|++++.... ..
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACS-H-FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGG-G-CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhcc-C-CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 6789999999999954433332 2 5699999999999999998764311 00
Q ss_pred -CcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCC-------cccHHHHHHHHhccCCCeEEEEeCC
Q 029803 71 -HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-------DNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 71 -~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~-------~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
..++++.+|+.+.++ +.......++||+|++.... ......++++.++|||||++++.+.
T Consensus 149 ~~~~~~~~~D~~~~~~-~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~ 216 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQP-LGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGA 216 (289)
T ss_dssp HHEEEEECCCTTSSST-TCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhhceEEecccCCCCC-ccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 014566777754221 00000123569999987532 2466789999999999999998653
No 232
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.33 E-value=5.2e-12 Score=92.12 Aligned_cols=99 Identities=16% Similarity=0.196 Sum_probs=70.5
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCC-CCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHH------------
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPE-DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL------------ 84 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~------------ 84 (187)
.++.+|||+|||+|..+..+++.+++ +++|+++|+++.. .. .+++++++|+.+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~-~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PI-PNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC-TTCEEEECCTTTTSSCCC--------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CC-CCceEEEccccchhhhhhcccccccc
Confidence 46679999999999999999998763 5899999999842 12 35888888875431
Q ss_pred -------HHHhhcccCCCceeEEEEeCCCcc-------c-------HHHHHHHHhccCCCeEEEEe
Q 029803 85 -------DQLLKYSENEGSFDYAFVDADKDN-------Y-------CNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 85 -------~~~~~~~~~~~~~D~i~~d~~~~~-------~-------~~~~~~~~~~L~~gG~lv~~ 129 (187)
..+... ...++||+|+++..... . ...++.+.++|+|||.+++.
T Consensus 89 ~~~~~~~~~~~~~-~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 153 (201)
T 2plw_A 89 MNNNSVDYKLKEI-LQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVK 153 (201)
T ss_dssp ---CHHHHHHHHH-HTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccchhhHHHHHhh-cCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 000000 02468999999853221 1 13677888999999999984
No 233
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.33 E-value=1.6e-12 Score=105.28 Aligned_cols=100 Identities=15% Similarity=0.165 Sum_probs=74.5
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.++.+|||||||+|..+..++.. +.+++++|+++.+++.++++ +......++..+..+.++.. .++|
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~~------~~~f 172 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRRT------EGPA 172 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHHH------HCCE
T ss_pred CCCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcccC------CCCE
Confidence 36779999999999999999875 56999999999999988876 33322222222222322221 3799
Q ss_pred eEEEEeCC---CcccHHHHHHHHhccCCCeEEEEeC
Q 029803 98 DYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 98 D~i~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
|+|++... ..+...+++++.++|+|||++++..
T Consensus 173 D~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 173 NVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp EEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence 99998753 3456789999999999999999964
No 234
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=99.32 E-value=1.6e-11 Score=97.43 Aligned_cols=148 Identities=15% Similarity=0.078 Sum_probs=105.3
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcC---C----CCcEEEEEcchHHHHHHHhh
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG---V----DHKINFIESEALSVLDQLLK 89 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~---~----~~~~~~~~~d~~~~~~~~~~ 89 (187)
..+|++||-||.|.|..+.++++. + ..+|+.+|++|..++.+++.+.... . .++++++.+|+.+++....+
T Consensus 203 ~~~pkrVLIIGgGdG~~~revlkh-~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~ 280 (381)
T 3c6k_A 203 DYTGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK 280 (381)
T ss_dssp CCTTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHH
T ss_pred cCCCCeEEEECCCcHHHHHHHHhc-C-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhh
Confidence 346899999999999999999885 4 4799999999999999999864311 1 24689999999998876433
Q ss_pred cccCCCceeEEEEeCCC-------------cccHHHHHHHHhccCCCeEEEEeCCCCCccccCCCCCCCCCcccchHHHH
Q 029803 90 YSENEGSFDYAFVDADK-------------DNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAI 156 (187)
Q Consensus 90 ~~~~~~~~D~i~~d~~~-------------~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (187)
. .++||+|++|... ....++++.+.+.|+|||+++....... ....+
T Consensus 281 ~---~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~-----------------~~~~~ 340 (381)
T 3c6k_A 281 E---GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVN-----------------LTEAL 340 (381)
T ss_dssp H---TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETT-----------------CHHHH
T ss_pred c---cCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCc-----------------chhHH
Confidence 2 4689999999521 0124678999999999999997522110 12235
Q ss_pred HHHHHHhhcC-CCeEE----Eeee---cCCceEEEEEc
Q 029803 157 LDLNRSLADD-PRVQL----SHVA---LGDGITICRRI 186 (187)
Q Consensus 157 ~~~~~~l~~~-~~~~~----~~lp---~~~G~~~~~~~ 186 (187)
..+.+.++.. +.+.. ..+| -.+|+.++.|+
T Consensus 341 ~~i~~tl~~vF~~v~~~~~~~~VPSy~~~W~F~~aSK~ 378 (381)
T 3c6k_A 341 SLYEEQLGRLYCPVEFSKEIVCVPSYLELWVFYTVWKK 378 (381)
T ss_dssp HHHHHHHTTSSSCEEEEEEEECCGGGSSCEEEEEEEEC
T ss_pred HHHHHHHHHhCCcceEeeEEEEecCCCCceeeeEEECC
Confidence 6666666654 33332 2234 24789999886
No 235
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.32 E-value=3.2e-12 Score=101.15 Aligned_cols=115 Identities=17% Similarity=0.137 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHH----HcCCCEEEEEcccccHHHHHHHhhCCCC----CEEEEEeCCcchHHHHHHHHHhcCCCCcEEEE
Q 029803 5 TIHGQLMAMLLR----LVNAKKTIEIGVFTGYSLLLTALTIPED----GQITAIDVNRETYEIGLPIIKKAGVDHKINFI 76 (187)
Q Consensus 5 ~~~~~ll~~l~~----~~~~~~vLeiG~g~G~~~~~la~~~~~~----~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~ 76 (187)
+.+..++..++. ..++.+|||+|||+|..+..+++.++.. .+++++|+++.+++.|+.++...+. +++++
T Consensus 112 ~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~ 189 (344)
T 2f8l_A 112 DSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTLL 189 (344)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEE
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceEE
Confidence 445555555543 2355799999999999999998876522 7899999999999999999987776 48899
Q ss_pred EcchHHHHHHHhhcccCCCceeEEEEeCCCcc---------------------cHHHHHHHHhccCCCeEEEEe
Q 029803 77 ESEALSVLDQLLKYSENEGSFDYAFVDADKDN---------------------YCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 77 ~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~~~---------------------~~~~~~~~~~~L~~gG~lv~~ 129 (187)
++|+.... ..++||+|++++.... ...+++.+.+.|+|||.+++.
T Consensus 190 ~~D~l~~~--------~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v 255 (344)
T 2f8l_A 190 HQDGLANL--------LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFL 255 (344)
T ss_dssp ESCTTSCC--------CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ECCCCCcc--------ccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEE
Confidence 99986521 1468999999864111 125789999999999988773
No 236
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.31 E-value=9.4e-12 Score=90.63 Aligned_cols=105 Identities=22% Similarity=0.246 Sum_probs=72.9
Q ss_pred HHHHHHHH---HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH--
Q 029803 9 QLMAMLLR---LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV-- 83 (187)
Q Consensus 9 ~ll~~l~~---~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-- 83 (187)
++++.+.+ ..++.+|||+|||+|.++..+++. .++|+++|+++.. .. .+++++++|+.+.
T Consensus 12 KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~-----------~~-~~v~~~~~D~~~~~~ 76 (191)
T 3dou_A 12 KLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME-----------EI-AGVRFIRCDIFKETI 76 (191)
T ss_dssp HHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC-----------CC-TTCEEEECCTTSSSH
T ss_pred HHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc-----------cC-CCeEEEEccccCHHH
Confidence 44444433 356789999999999999999886 6899999999852 12 3689999997542
Q ss_pred HH---HHhhcccCCCceeEEEEeCCCcc--------------cHHHHHHHHhccCCCeEEEEe
Q 029803 84 LD---QLLKYSENEGSFDYAFVDADKDN--------------YCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 84 ~~---~~~~~~~~~~~~D~i~~d~~~~~--------------~~~~~~~~~~~L~~gG~lv~~ 129 (187)
.. ..... ...++||+|++|..+.. ....++.+.++|+|||.+++.
T Consensus 77 ~~~~~~~~~~-~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k 138 (191)
T 3dou_A 77 FDDIDRALRE-EGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLK 138 (191)
T ss_dssp HHHHHHHHHH-HTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHhhc-ccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 11 11100 00148999999864311 134577778999999999975
No 237
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.31 E-value=3.2e-12 Score=94.72 Aligned_cols=103 Identities=19% Similarity=0.230 Sum_probs=80.0
Q ss_pred HHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHH
Q 029803 8 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 87 (187)
Q Consensus 8 ~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 87 (187)
...+..+....++.+|||+|||+|..+..++.. +++|+++.+++.++++ +++++.+|+.+. + +
T Consensus 36 ~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~-~-~ 98 (219)
T 1vlm_A 36 LSELQAVKCLLPEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR--------GVFVLKGTAENL-P-L 98 (219)
T ss_dssp HHHHHHHHHHCCSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT--------TCEEEECBTTBC-C-S
T ss_pred HHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc--------CCEEEEcccccC-C-C
Confidence 344555666667899999999999998877642 9999999999998876 478888887542 1 1
Q ss_pred hhcccCCCceeEEEEeCC---CcccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 88 LKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 88 ~~~~~~~~~~D~i~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
..++||+|++... ......+++++.++|+|||.+++....
T Consensus 99 -----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 99 -----KDESFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp -----CTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -----CCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeC
Confidence 2468999998753 345678899999999999999986543
No 238
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.31 E-value=7.1e-13 Score=99.48 Aligned_cols=98 Identities=15% Similarity=0.138 Sum_probs=67.9
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEE-cchHHHH-HHHhhcccCCCc
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE-SEALSVL-DQLLKYSENEGS 96 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~-~d~~~~~-~~~~~~~~~~~~ 96 (187)
++++|||||||+|..+..+++. . ..+|+++|+++++++.++++.. ++.... .+..... ..+ ....
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~-g-~~~V~gvDis~~ml~~a~~~~~------~~~~~~~~~~~~~~~~~~-----~~~~ 103 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN-G-AKLVYALDVGTNQLAWKIRSDE------RVVVMEQFNFRNAVLADF-----EQGR 103 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSCCCCCHHHHTCT------TEEEECSCCGGGCCGGGC-----CSCC
T ss_pred CCCEEEEEccCCCHHHHHHHhc-C-CCEEEEEcCCHHHHHHHHHhCc------cccccccceEEEeCHhHc-----CcCC
Confidence 4679999999999999999986 2 3599999999999998776532 222221 1221110 111 1123
Q ss_pred eeEEEEeCCCcccHHHHHHHHhccCCCeEEEEe
Q 029803 97 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 97 ~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
||.+.+|........+++++.++|+|||.+++.
T Consensus 104 ~d~~~~D~v~~~l~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 104 PSFTSIDVSFISLDLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp CSEEEECCSSSCGGGTHHHHHHHSCTTCEEEEE
T ss_pred CCEEEEEEEhhhHHHHHHHHHHhccCCCEEEEE
Confidence 677767665555678899999999999999883
No 239
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.30 E-value=7.3e-13 Score=102.20 Aligned_cols=99 Identities=21% Similarity=0.107 Sum_probs=71.7
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEE-EcchHHHHHHHhhcccCCCce
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFI-ESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~~~~~ 97 (187)
++.+|||||||+|.++..++.. + ..+|+++|+++.|++.+.++ ..++... ..++......- ....+|
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~-g-a~~V~aVDvs~~mL~~a~r~------~~rv~~~~~~ni~~l~~~~----l~~~~f 152 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN-G-AKLVYAVDVGTNQLVWKLRQ------DDRVRSMEQYNFRYAEPVD----FTEGLP 152 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSSSCSCHHHHT------CTTEEEECSCCGGGCCGGG----CTTCCC
T ss_pred cccEEEecCCCccHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHh------CcccceecccCceecchhh----CCCCCC
Confidence 5679999999999999988875 2 46999999999999875432 1234332 23332211110 012459
Q ss_pred eEEEEeCCCcccHHHHHHHHhccCCCeEEEEe
Q 029803 98 DYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 98 D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
|+|++|.........+.++.++|+|||.+++-
T Consensus 153 D~v~~d~sf~sl~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 153 SFASIDVSFISLNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp SEEEECCSSSCGGGTHHHHHHHSCTTCEEEEE
T ss_pred CEEEEEeeHhhHHHHHHHHHHHcCcCCEEEEE
Confidence 99999987767788999999999999999874
No 240
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.28 E-value=3.1e-12 Score=97.39 Aligned_cols=91 Identities=18% Similarity=0.184 Sum_probs=73.2
Q ss_pred HHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCc-------chHHHHHHHHHhcCCCCcEEEEEcch
Q 029803 8 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNR-------ETYEIGLPIIKKAGVDHKINFIESEA 80 (187)
Q Consensus 8 ~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~-------~~~~~a~~~~~~~~~~~~~~~~~~d~ 80 (187)
..++...+...++.+|||+|||+|..++.++.. +++|+++|+++ ++++.++++++.+++.++++++++|+
T Consensus 72 ~~~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~ 148 (258)
T 2r6z_A 72 GELIAKAVNHTAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNA 148 (258)
T ss_dssp -CHHHHHTTGGGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCH
T ss_pred hHHHHHHhCcCCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCH
Confidence 344555555556789999999999999999985 57999999999 99999999988777766799999999
Q ss_pred HHHHHHHhhcccCCCceeEEEEeC
Q 029803 81 LSVLDQLLKYSENEGSFDYAFVDA 104 (187)
Q Consensus 81 ~~~~~~~~~~~~~~~~~D~i~~d~ 104 (187)
.+.++.+.+. .++||+|++|.
T Consensus 149 ~~~l~~~~~~---~~~fD~V~~dP 169 (258)
T 2r6z_A 149 AEQMPALVKT---QGKPDIVYLDP 169 (258)
T ss_dssp HHHHHHHHHH---HCCCSEEEECC
T ss_pred HHHHHhhhcc---CCCccEEEECC
Confidence 9877655210 15899999986
No 241
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.28 E-value=4.1e-11 Score=86.92 Aligned_cols=100 Identities=11% Similarity=0.151 Sum_probs=71.0
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCC--------CEEEEEeCCcchHHHHHHHHHhcCCCCcEEEE-EcchHHHH-H-H
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPED--------GQITAIDVNRETYEIGLPIIKKAGVDHKINFI-ESEALSVL-D-Q 86 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~--------~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~-~~d~~~~~-~-~ 86 (187)
.++.+|||+|||+|..+..+++..+.. .+|+++|+++.. .. .+++++ .+|..+.. . .
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-EGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-TTCEEECSCCTTSHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-CCCeEEEeccCCCHHHHHH
Confidence 467899999999999999999987632 799999999842 12 357888 88865421 1 1
Q ss_pred HhhcccCCCceeEEEEeCCCc-------cc-------HHHHHHHHhccCCCeEEEEeC
Q 029803 87 LLKYSENEGSFDYAFVDADKD-------NY-------CNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 87 ~~~~~~~~~~~D~i~~d~~~~-------~~-------~~~~~~~~~~L~~gG~lv~~~ 130 (187)
+... ...++||+|+++.... .. ...++++.++|+|||.+++..
T Consensus 89 ~~~~-~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 89 ILEV-LPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp HHHH-SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHh-cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 1000 0135899999975321 11 367888999999999999864
No 242
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.28 E-value=1.4e-11 Score=92.90 Aligned_cols=145 Identities=10% Similarity=-0.012 Sum_probs=102.2
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
..|.+|||||||+|-.++.++...+ ..+|+++|+++.+++.+++++..+++. .++.+.|..... ..++|
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p-~a~y~a~DId~~~le~a~~~l~~~g~~--~~~~v~D~~~~~--------p~~~~ 199 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPA-ETVYIASDIDARLVGFVDEALTRLNVP--HRTNVADLLEDR--------LDEPA 199 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCT-TCEEEEEESBHHHHHHHHHHHHHTTCC--EEEEECCTTTSC--------CCSCC
T ss_pred CCCceeeeeccCccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeeecccC--------CCCCc
Confidence 5689999999999999998887655 899999999999999999999998875 778888875432 25789
Q ss_pred eEEEEeCCCcc-----cHHHHHHHHhccCCCeEEEEeCCC-CCccccCCCCCCCCCcccchHHHHHHHHHHhhcCCCeEE
Q 029803 98 DYAFVDADKDN-----YCNYHERLMKLLKVGGIAVYDNTL-WGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQL 171 (187)
Q Consensus 98 D~i~~d~~~~~-----~~~~~~~~~~~L~~gG~lv~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 171 (187)
|++++.-..+. ....+ .+++.|+++|++|--+.- ..| +..+ +.....+.++....+.++..
T Consensus 200 DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~G-----------rs~g-m~~~Y~~~~e~~~~~~g~~~ 266 (281)
T 3lcv_B 200 DVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQ-----------RSKG-MFQNYSQSFESQARERSCRI 266 (281)
T ss_dssp SEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEECC------------------C-HHHHHHHHHHHHHHHHTCCE
T ss_pred chHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccchhhcC-----------CCcc-hhhHHHHHHHHHHHhcCCce
Confidence 99988532222 12344 688999999999875541 111 1112 44445555555554555566
Q ss_pred EeeecCCceEEEEEc
Q 029803 172 SHVALGDGITICRRI 186 (187)
Q Consensus 172 ~~lp~~~G~~~~~~~ 186 (187)
..+-+++-+.++.+|
T Consensus 267 ~~~~~~nEl~y~i~k 281 (281)
T 3lcv_B 267 QRLEIGNELIYVIQK 281 (281)
T ss_dssp EEEEETTEEEEEEC-
T ss_pred eeeeecCeeEEEecC
Confidence 777788877776553
No 243
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.27 E-value=3.7e-12 Score=94.37 Aligned_cols=97 Identities=13% Similarity=0.093 Sum_probs=76.3
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++ .+++.+|+.+.... ...++|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~-----~~~~~f 94 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN---GTRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMP-----YEEEQF 94 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT---TCEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCC-----SCTTCE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCC-----CCCCcc
Confidence 46789999999999999999886 379999999999999888653 26788887642111 124689
Q ss_pred eEEEEeCC---CcccHHHHHHHHhccCCCeEEEEeC
Q 029803 98 DYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 98 D~i~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
|+|++... ..+...+++++.++|+|||.+++..
T Consensus 95 D~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 95 DCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp EEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEE
T ss_pred CEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 99998753 2345788999999999999999864
No 244
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.27 E-value=1e-11 Score=99.20 Aligned_cols=99 Identities=9% Similarity=0.085 Sum_probs=77.8
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.+..+|||||||+|..+..+++.+| +.+++++|+ |++++.++++ .+++++.+|..+. + ...
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~~---~------p~~- 262 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYP-SINAINFDL-PHVIQDAPAF-------SGVEHLGGDMFDG---V------PKG- 262 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTTC---C------CCC-
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeh-HHHHHhhhhc-------CCCEEEecCCCCC---C------CCC-
Confidence 3467999999999999999999987 789999999 8887766532 4799999998752 1 123
Q ss_pred eEEEEeCCC-----cccHHHHHHHHhccCCCeEEEEeCCCCCc
Q 029803 98 DYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLWGG 135 (187)
Q Consensus 98 D~i~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~~~ 135 (187)
|+|++.... +....+++++.+.|+|||.+++.+.....
T Consensus 263 D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 305 (368)
T 3reo_A 263 DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPP 305 (368)
T ss_dssp SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCS
T ss_pred CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 999986532 23346899999999999999988776543
No 245
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.27 E-value=1.5e-10 Score=91.76 Aligned_cols=119 Identities=14% Similarity=0.087 Sum_probs=94.2
Q ss_pred HHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCC-----CcEEEEEcchHH
Q 029803 8 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD-----HKINFIESEALS 82 (187)
Q Consensus 8 ~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~-----~~~~~~~~d~~~ 82 (187)
..+...++...++.+|||++++.|.=+..++...+ +++|+++|+++..+...+++++.++.. .++.+...|+..
T Consensus 137 S~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~-~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~ 215 (359)
T 4fzv_A 137 SLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGC-CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRK 215 (359)
T ss_dssp GHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTC-EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGG
T ss_pred HHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcC-CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhh
Confidence 34555666677888999999999999999998765 678999999999999999999987653 468899999876
Q ss_pred HHHHHhhcccCCCceeEEEEeCCCcc---------------------------cHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 83 VLDQLLKYSENEGSFDYAFVDADKDN---------------------------YCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 83 ~~~~~~~~~~~~~~~D~i~~d~~~~~---------------------------~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
+... ..+.||.|++|+..+. -..+++.++++|||||+||...+..
T Consensus 216 ~~~~------~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 216 WGEL------EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp HHHH------STTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred cchh------ccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCC
Confidence 5433 2478999999964321 0246777889999999999976664
No 246
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.26 E-value=4e-12 Score=100.69 Aligned_cols=105 Identities=12% Similarity=0.078 Sum_probs=80.0
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++.+|||||||+|..+..+++..+ +.+++++|+ +..+. +++++..+..++++++.+|+.+ .+ + +
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~---~~------p-~ 247 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHP-GLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLR---EV------P-H 247 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCT-TEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTT---CC------C-C
T ss_pred ccCCceEEEECCccCHHHHHHHHHCC-CCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCC---CC------C-C
Confidence 34577999999999999999999987 789999999 44444 3333344556789999999862 11 3 8
Q ss_pred eeEEEEeCCC---c--ccHHHHHHHHhccCCCeEEEEeCCCCCc
Q 029803 97 FDYAFVDADK---D--NYCNYHERLMKLLKVGGIAVYDNTLWGG 135 (187)
Q Consensus 97 ~D~i~~d~~~---~--~~~~~~~~~~~~L~~gG~lv~~~~~~~~ 135 (187)
||+|++...- . ....+++++.+.|+|||.+++.+.....
T Consensus 248 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~ 291 (348)
T 3lst_A 248 ADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPE 291 (348)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCS
T ss_pred CcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 9999987532 2 2257899999999999999997776543
No 247
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.26 E-value=2.7e-11 Score=92.48 Aligned_cols=121 Identities=15% Similarity=0.145 Sum_probs=80.4
Q ss_pred HHHHHHHcCCCEEEEEcccc--cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHh
Q 029803 11 MAMLLRLVNAKKTIEIGVFT--GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLL 88 (187)
Q Consensus 11 l~~l~~~~~~~~vLeiG~g~--G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 88 (187)
+..++......+|||||||+ +..+..++....++.+|+++|.||.+++.+++++...+ ..+++++++|+.+.-..+.
T Consensus 70 v~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~v~aD~~~~~~~l~ 148 (277)
T 3giw_A 70 VAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAYVEADMLDPASILD 148 (277)
T ss_dssp HHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEEEECCTTCHHHHHT
T ss_pred HHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEEEEecccChhhhhc
Confidence 33333334557999999997 44455555544348999999999999999999886543 2479999999976421110
Q ss_pred hcccCCCcee-----EEEEeCC---Ccc---cHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 89 KYSENEGSFD-----YAFVDAD---KDN---YCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 89 ~~~~~~~~~D-----~i~~d~~---~~~---~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
.. ...+.|| .|++... ... ....++.+.+.|+|||+|++.....
T Consensus 149 ~~-~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 149 AP-ELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp CH-HHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred cc-ccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 00 0013344 4555532 112 3578999999999999999976553
No 248
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.25 E-value=2.2e-11 Score=94.63 Aligned_cols=91 Identities=13% Similarity=0.078 Sum_probs=68.3
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029803 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 83 (187)
Q Consensus 4 ~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 83 (187)
.+...+.+...+...++.+|||||||+|..+..++.. ..+|+++|+++.+++.+++++...+. .+++++++|+.+.
T Consensus 27 ~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~ 102 (299)
T 2h1r_A 27 NPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKT 102 (299)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSS
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhC
Confidence 3444445555555667789999999999999999875 56999999999999999999987776 4699999998653
Q ss_pred HHHHhhcccCCCceeEEEEeCCCc
Q 029803 84 LDQLLKYSENEGSFDYAFVDADKD 107 (187)
Q Consensus 84 ~~~~~~~~~~~~~~D~i~~d~~~~ 107 (187)
..++||+|+++....
T Consensus 103 ---------~~~~~D~Vv~n~py~ 117 (299)
T 2h1r_A 103 ---------VFPKFDVCTANIPYK 117 (299)
T ss_dssp ---------CCCCCSEEEEECCGG
T ss_pred ---------CcccCCEEEEcCCcc
Confidence 125899999986543
No 249
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.23 E-value=4.8e-11 Score=95.13 Aligned_cols=98 Identities=9% Similarity=0.077 Sum_probs=77.8
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.+..+|||||||+|..+..+++.+| +.+++++|+ |++++.+++. .+++++.+|+.+. + ...
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~D~~~~---~------p~~- 260 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYP-TIKGVNFDL-PHVISEAPQF-------PGVTHVGGDMFKE---V------PSG- 260 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTTC---C------CCC-
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCC-CCeEEEecC-HHHHHhhhhc-------CCeEEEeCCcCCC---C------CCC-
Confidence 3568999999999999999999987 789999999 8877766532 4799999998752 1 123
Q ss_pred eEEEEeCCC-----cccHHHHHHHHhccCCCeEEEEeCCCCC
Q 029803 98 DYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLWG 134 (187)
Q Consensus 98 D~i~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
|+|++.... +....+++++.+.|+|||.+++.+....
T Consensus 261 D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 302 (364)
T 3p9c_A 261 DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILP 302 (364)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 999986432 3345789999999999999998877654
No 250
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.22 E-value=1.2e-11 Score=94.87 Aligned_cols=105 Identities=21% Similarity=0.227 Sum_probs=75.0
Q ss_pred CCCEEEEEcccccH----HHHHHHhhCCC---CCEEEEEeCCcchHHHHHHHHHh-----------------------cC
Q 029803 19 NAKKTIEIGVFTGY----SLLLTALTIPE---DGQITAIDVNRETYEIGLPIIKK-----------------------AG 68 (187)
Q Consensus 19 ~~~~vLeiG~g~G~----~~~~la~~~~~---~~~v~~iD~~~~~~~~a~~~~~~-----------------------~~ 68 (187)
++.+|+|+|||+|. .+..++..++. +.+|+++|+|+++++.|++++.. .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 45556655432 35999999999999999987410 00
Q ss_pred -------CCCcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCC-----CcccHHHHHHHHhccCCCeEEEEe
Q 029803 69 -------VDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 69 -------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+..++++.++|..+. .+ ...++||+|+|... .+.....++.+.+.|+|||++++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~--~~----~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEK--QY----NVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCS--SC----CCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCC--CC----CcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 013588999998652 11 01368999999642 223367899999999999999983
No 251
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.22 E-value=2.2e-11 Score=97.99 Aligned_cols=117 Identities=12% Similarity=0.041 Sum_probs=84.9
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCC---C----------------------------------CCE
Q 029803 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIP---E----------------------------------DGQ 46 (187)
Q Consensus 4 ~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~---~----------------------------------~~~ 46 (187)
.+..+..+-.+....++..+||.+||+|..++.+|.... + ..+
T Consensus 186 ~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 265 (393)
T 3k0b_A 186 KETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLN 265 (393)
T ss_dssp CHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC
T ss_pred cHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCce
Confidence 445555555555566778999999999999988876432 1 156
Q ss_pred EEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCC-------cccHHHHHHHHhc
Q 029803 47 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-------DNYCNYHERLMKL 119 (187)
Q Consensus 47 v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~-------~~~~~~~~~~~~~ 119 (187)
|+++|+++.+++.|++|+..+++.+++++.++|+.+.. ...+||+|+++... .....+++.+.+.
T Consensus 266 V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~--------~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~ 337 (393)
T 3k0b_A 266 IIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQ--------TEDEYGVVVANPPYGERLEDEEAVRQLYREMGIV 337 (393)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCC--------CCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCC--------CCCCCCEEEECCCCccccCCchhHHHHHHHHHHH
Confidence 99999999999999999999999888999999997642 13589999999643 1223345544444
Q ss_pred cCC--CeEEEE
Q 029803 120 LKV--GGIAVY 128 (187)
Q Consensus 120 L~~--gG~lv~ 128 (187)
|++ ||.+.+
T Consensus 338 lk~~~g~~~~i 348 (393)
T 3k0b_A 338 YKRMPTWSVYV 348 (393)
T ss_dssp HHTCTTCEEEE
T ss_pred HhcCCCCEEEE
Confidence 444 665544
No 252
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.21 E-value=1.3e-10 Score=89.96 Aligned_cols=100 Identities=16% Similarity=0.110 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029803 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 84 (187)
Q Consensus 5 ~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 84 (187)
+.+.+-+...+...++.+|||||||+|..+..++.. ..+|+++|+++++++.+++++.. ..+++++++|+.+.-
T Consensus 36 ~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~~---~~~v~vi~gD~l~~~ 109 (295)
T 3gru_A 36 KNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKEL---YNNIEIIWGDALKVD 109 (295)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHHH---CSSEEEEESCTTTSC
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhcc---CCCeEEEECchhhCC
Confidence 334444444445567789999999999999999986 46999999999999999999873 246999999997631
Q ss_pred HHHhhcccCCCceeEEEEeCCCcccHHHHHHHH
Q 029803 85 DQLLKYSENEGSFDYAFVDADKDNYCNYHERLM 117 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~ 117 (187)
+ ...+||.|+.+.........+..++
T Consensus 110 --~-----~~~~fD~Iv~NlPy~is~pil~~lL 135 (295)
T 3gru_A 110 --L-----NKLDFNKVVANLPYQISSPITFKLI 135 (295)
T ss_dssp --G-----GGSCCSEEEEECCGGGHHHHHHHHH
T ss_pred --c-----ccCCccEEEEeCcccccHHHHHHHH
Confidence 1 1247999998864433333333333
No 253
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.20 E-value=1.2e-11 Score=91.15 Aligned_cols=95 Identities=14% Similarity=0.094 Sum_probs=72.3
Q ss_pred HHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHh
Q 029803 9 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLL 88 (187)
Q Consensus 9 ~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 88 (187)
.++..+....++.+|||||||+|..+..++ .+++++|+++. ++++..+|+.+. +
T Consensus 57 ~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~----------------~~~~~~~d~~~~-~--- 110 (215)
T 2zfu_A 57 RIARDLRQRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL----------------DPRVTVCDMAQV-P--- 110 (215)
T ss_dssp HHHHHHHTSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS----------------STTEEESCTTSC-S---
T ss_pred HHHHHHhccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC----------------CceEEEeccccC-C---
Confidence 456666555677899999999999887663 58999999987 356778887652 1
Q ss_pred hcccCCCceeEEEEeCC--CcccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 89 KYSENEGSFDYAFVDAD--KDNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 89 ~~~~~~~~~D~i~~d~~--~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
...++||+|++... ......+++++.++|+|||.+++.+..
T Consensus 111 ---~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 153 (215)
T 2zfu_A 111 ---LEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVS 153 (215)
T ss_dssp ---CCTTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred ---CCCCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEEcC
Confidence 12468999998743 355678899999999999999986543
No 254
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.19 E-value=5.9e-11 Score=95.16 Aligned_cols=117 Identities=8% Similarity=-0.005 Sum_probs=86.9
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCC-------------------------------------CCE
Q 029803 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE-------------------------------------DGQ 46 (187)
Q Consensus 4 ~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~-------------------------------------~~~ 46 (187)
.+..+..|-.+....+...++|.+||+|..++..+..... ..+
T Consensus 179 ~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 258 (384)
T 3ldg_A 179 KENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLD 258 (384)
T ss_dssp CHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC
T ss_pred cHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCce
Confidence 4455555555556667789999999999999888754321 156
Q ss_pred EEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCC-------cccHHHHHHHHhc
Q 029803 47 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-------DNYCNYHERLMKL 119 (187)
Q Consensus 47 v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~-------~~~~~~~~~~~~~ 119 (187)
++++|+++.+++.|++|+..+++.+++++.++|+.+.. ...+||+|+++... .....+++.+.+.
T Consensus 259 v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~--------~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~ 330 (384)
T 3ldg_A 259 ISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFK--------TNKINGVLISNPPYGERLLDDKAVDILYNEMGET 330 (384)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCC--------CCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCC--------ccCCcCEEEECCchhhccCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999888999999997642 13589999999642 2334556656556
Q ss_pred cCC--CeEEEE
Q 029803 120 LKV--GGIAVY 128 (187)
Q Consensus 120 L~~--gG~lv~ 128 (187)
|++ |+.+.+
T Consensus 331 lk~~~g~~~~i 341 (384)
T 3ldg_A 331 FAPLKTWSQFI 341 (384)
T ss_dssp HTTCTTSEEEE
T ss_pred HhhCCCcEEEE
Confidence 655 665544
No 255
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.19 E-value=3e-11 Score=97.26 Aligned_cols=77 Identities=18% Similarity=0.138 Sum_probs=66.4
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhc--CCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--GVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
++.+|||+|||+|..++.++.. +.+|+++|+++.+++.|++|++.+ ++ ++++++++|+.+.++... .++
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~-----~~~ 163 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIK-----TFH 163 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHH-----HHC
T ss_pred CCCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhcc-----CCC
Confidence 3789999999999999999875 569999999999999999999987 77 579999999988655431 258
Q ss_pred eeEEEEeC
Q 029803 97 FDYAFVDA 104 (187)
Q Consensus 97 ~D~i~~d~ 104 (187)
||+||+|.
T Consensus 164 fDvV~lDP 171 (410)
T 3ll7_A 164 PDYIYVDP 171 (410)
T ss_dssp CSEEEECC
T ss_pred ceEEEECC
Confidence 99999995
No 256
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.19 E-value=2.9e-11 Score=97.04 Aligned_cols=116 Identities=16% Similarity=0.115 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCC-------------------------------------CCCEE
Q 029803 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIP-------------------------------------EDGQI 47 (187)
Q Consensus 5 ~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~-------------------------------------~~~~v 47 (187)
+..+..|-.+....+...+||++||+|..++.++.... ...+|
T Consensus 181 e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 260 (385)
T 3ldu_A 181 ETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKI 260 (385)
T ss_dssp HHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCE
T ss_pred HHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceE
Confidence 34444444444556678999999999999998876532 12579
Q ss_pred EEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCCc-------ccHHHHHHHHhcc
Q 029803 48 TAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-------NYCNYHERLMKLL 120 (187)
Q Consensus 48 ~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~~-------~~~~~~~~~~~~L 120 (187)
+++|+++.+++.|++|+..+++.+++++.++|+.+... ..+||+|+++.... ....+++.+.+.|
T Consensus 261 ~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~--------~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~l 332 (385)
T 3ldu_A 261 YGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKS--------EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAF 332 (385)
T ss_dssp EEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCC--------SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCc--------CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999988789999999976421 36899999986531 2233455554455
Q ss_pred CC--CeEEEE
Q 029803 121 KV--GGIAVY 128 (187)
Q Consensus 121 ~~--gG~lv~ 128 (187)
++ |+.+.+
T Consensus 333 k~~~g~~~~i 342 (385)
T 3ldu_A 333 RKLKNWSYYL 342 (385)
T ss_dssp HTSBSCEEEE
T ss_pred hhCCCCEEEE
Confidence 54 555443
No 257
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.18 E-value=2.7e-11 Score=98.02 Aligned_cols=106 Identities=16% Similarity=0.176 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029803 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 84 (187)
Q Consensus 5 ~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 84 (187)
+...+++..++...++.+|||+|||+|..+..+++...+..+++++|+++.+++.| .+++++++|+.+..
T Consensus 25 ~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~~~~ 94 (421)
T 2ih2_A 25 PEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADFLLWE 94 (421)
T ss_dssp HHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCGGGCC
T ss_pred HHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCChhhcC
Confidence 34445555444434567999999999999999998763368999999999998766 36899999987631
Q ss_pred HHHhhcccCCCceeEEEEeCCC--------------c------------------ccHHHHHHHHhccCCCeEEEE
Q 029803 85 DQLLKYSENEGSFDYAFVDADK--------------D------------------NYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~i~~d~~~--------------~------------------~~~~~~~~~~~~L~~gG~lv~ 128 (187)
..++||+|++++.. . .+..+++.+.++|+|||.+++
T Consensus 95 --------~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~ 162 (421)
T 2ih2_A 95 --------PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVF 162 (421)
T ss_dssp --------CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEE
T ss_pred --------ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEE
Confidence 13689999996321 0 112568888999999998877
No 258
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.17 E-value=1.9e-10 Score=89.32 Aligned_cols=86 Identities=16% Similarity=0.102 Sum_probs=69.5
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++.+|||+|||+|..+..+++.++ +++|+++|.++++++.|+++++.++ .+++++++|+.+....+... ...+
T Consensus 24 ~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~~l~~~--g~~~ 98 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADFLLKTL--GIEK 98 (301)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHHHHHHT--TCSC
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHHHHHhc--CCCC
Confidence 45678999999999999999999887 7899999999999999999998776 57999999987643222110 1258
Q ss_pred eeEEEEeCCCc
Q 029803 97 FDYAFVDADKD 107 (187)
Q Consensus 97 ~D~i~~d~~~~ 107 (187)
||.|++|....
T Consensus 99 ~D~Vl~D~gvS 109 (301)
T 1m6y_A 99 VDGILMDLGVS 109 (301)
T ss_dssp EEEEEEECSCC
T ss_pred CCEEEEcCccc
Confidence 99999997543
No 259
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.16 E-value=2.4e-11 Score=99.27 Aligned_cols=117 Identities=15% Similarity=0.105 Sum_probs=88.8
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCC------------CCCEEEEEeCCcchHHHHHHHHHhcCCCC
Q 029803 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIP------------EDGQITAIDVNRETYEIGLPIIKKAGVDH 71 (187)
Q Consensus 4 ~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~------------~~~~v~~iD~~~~~~~~a~~~~~~~~~~~ 71 (187)
++.+.+++..++...++.+|+|.|||+|...+.+++.+. ...+++++|+++.+++.|+.++...+...
T Consensus 156 P~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~ 235 (445)
T 2okc_A 156 PRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGT 235 (445)
T ss_dssp CHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCS
T ss_pred cHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCc
Confidence 345555666666555667999999999999998887541 13689999999999999999998888753
Q ss_pred -cEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCCcc--------------------cHHHHHHHHhccCCCeEEEE
Q 029803 72 -KINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--------------------YCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 72 -~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~~~--------------------~~~~~~~~~~~L~~gG~lv~ 128 (187)
..++.++|+.... ...+||+|+.++.... ...+++.+.++|+|||.+++
T Consensus 236 ~~~~i~~gD~l~~~--------~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~ 305 (445)
T 2okc_A 236 DRSPIVCEDSLEKE--------PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAV 305 (445)
T ss_dssp SCCSEEECCTTTSC--------CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCEeeCCCCCCc--------ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEE
Confidence 5788999986531 1358999998852110 13689999999999998866
No 260
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.16 E-value=5.9e-10 Score=83.30 Aligned_cols=145 Identities=12% Similarity=0.059 Sum_probs=97.0
Q ss_pred HHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 15 LRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 15 ~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
....+|.+|||||||+|-.++.+. + ..+++++|+++.+++.+++++...+ ....+.++|..... ..
T Consensus 101 ~~~~~p~~VLDlGCG~gpLal~~~---~-~~~y~a~DId~~~i~~ar~~~~~~g--~~~~~~v~D~~~~~--------~~ 166 (253)
T 3frh_A 101 FSAETPRRVLDIACGLNPLALYER---G-IASVWGCDIHQGLGDVITPFAREKD--WDFTFALQDVLCAP--------PA 166 (253)
T ss_dssp TSSCCCSEEEEETCTTTHHHHHHT---T-CSEEEEEESBHHHHHHHHHHHHHTT--CEEEEEECCTTTSC--------CC
T ss_pred hcCCCCCeEEEecCCccHHHHHhc---c-CCeEEEEeCCHHHHHHHHHHHHhcC--CCceEEEeecccCC--------CC
Confidence 334578999999999999988776 3 7899999999999999999988777 35888888876431 24
Q ss_pred CceeEEEEeCCC-----cccHHHHHHHHhccCCCeEEEEeCCC-CCccccCCCCCCCCCcccchHHHHHHHHHHhhcCCC
Q 029803 95 GSFDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTL-WGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPR 168 (187)
Q Consensus 95 ~~~D~i~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 168 (187)
++||+|++--.. ......+ .++..|++++++|.-++- ..|.-. + +...-+++++.......
T Consensus 167 ~~~DvvLllk~lh~LE~q~~~~~~-~ll~aL~~~~vvVsfPtksl~Gr~~-----------g-m~~~Y~~~~e~~~~~~~ 233 (253)
T 3frh_A 167 EAGDLALIFKLLPLLEREQAGSAM-ALLQSLNTPRMAVSFPTRSLGGRGK-----------G-MEANYAAWFEGGLPAEF 233 (253)
T ss_dssp CBCSEEEEESCHHHHHHHSTTHHH-HHHHHCBCSEEEEEEECC-----------------------CHHHHHHHHSCTTE
T ss_pred CCcchHHHHHHHHHhhhhchhhHH-HHHHHhcCCCEEEEcChHHhcCCCc-----------c-hhhHHHHHHHHHhhccc
Confidence 699999876221 1112233 677899999998875422 122110 1 22223444444445555
Q ss_pred eEEEeeecCCceEEEEEc
Q 029803 169 VQLSHVALGDGITICRRI 186 (187)
Q Consensus 169 ~~~~~lp~~~G~~~~~~~ 186 (187)
+..-.+-+++-+....+|
T Consensus 234 ~~~~~~~~~nEl~~~i~~ 251 (253)
T 3frh_A 234 EIEDKKTIGTELIYLIKK 251 (253)
T ss_dssp EEEEEEEETTEEEEEEEE
T ss_pred hhhhheecCceEEEEEec
Confidence 666667788888777665
No 261
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.16 E-value=3e-10 Score=95.48 Aligned_cols=102 Identities=22% Similarity=0.223 Sum_probs=78.2
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..+|.+|||||||.|..+..+|+. +++|++||.++.+++.|+.+....+.. ++++.++++.+..... ..++
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~~-~~~~~~~~~~~~~~~~-----~~~~ 134 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPDF-AAEFRVGRIEEVIAAL-----EEGE 134 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTTS-EEEEEECCHHHHHHHC-----CTTS
T ss_pred cCCCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCCC-ceEEEECCHHHHhhhc-----cCCC
Confidence 457889999999999999999986 689999999999999999998877643 5999999998876543 2568
Q ss_pred eeEEEEeCCCcccH-----HHHHHHHhccCCCeEEE
Q 029803 97 FDYAFVDADKDNYC-----NYHERLMKLLKVGGIAV 127 (187)
Q Consensus 97 ~D~i~~d~~~~~~~-----~~~~~~~~~L~~gG~lv 127 (187)
||+|++-.--++.. ..+..+.+.|++++...
T Consensus 135 fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~ 170 (569)
T 4azs_A 135 FDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAV 170 (569)
T ss_dssp CSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEE
T ss_pred ccEEEECcchhcCCCHHHHHHHHHHHHHhcccccee
Confidence 99999865333322 22334556677766443
No 262
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.14 E-value=3.5e-11 Score=96.05 Aligned_cols=97 Identities=14% Similarity=0.153 Sum_probs=77.2
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.++.+|||||||+|..+..+++..+ ..+++++|+ +.+++.+++. .+++++.+|+.+. + ..|
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~~---~-------~~~ 268 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYP-LIKGINFDL-PQVIENAPPL-------SGIEHVGGDMFAS---V-------PQG 268 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTTC---C-------CCE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCC-CCeEEEeCh-HHHHHhhhhc-------CCCEEEeCCcccC---C-------CCC
Confidence 3568999999999999999999987 789999999 8888776641 3599999998651 1 239
Q ss_pred eEEEEeCCC---cc--cHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 98 DYAFVDADK---DN--YCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 98 D~i~~d~~~---~~--~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
|+|++...- .. ...+++++.+.|+|||.+++.+...
T Consensus 269 D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~ 309 (372)
T 1fp1_D 269 DAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFIL 309 (372)
T ss_dssp EEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 999987532 22 2378999999999999999876554
No 263
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.14 E-value=1.8e-11 Score=93.03 Aligned_cols=103 Identities=9% Similarity=0.139 Sum_probs=72.1
Q ss_pred HHHHHHHcCC--CEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcC--------CCCcEEEEEcch
Q 029803 11 MAMLLRLVNA--KKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG--------VDHKINFIESEA 80 (187)
Q Consensus 11 l~~l~~~~~~--~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~--------~~~~~~~~~~d~ 80 (187)
+...+...++ .+|||+|||+|..++++++. +++|+++|.++..++.++++++... +..+++++++|+
T Consensus 78 l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~ 154 (258)
T 2oyr_A 78 VAKAVGIKGDYLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASS 154 (258)
T ss_dssp HHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCH
T ss_pred HHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCH
Confidence 3334444566 89999999999999999986 5689999999998888887776432 224799999999
Q ss_pred HHHHHHHhhcccCCCceeEEEEeCCCcc--cHHHHHHHHhccCC
Q 029803 81 LSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKLLKV 122 (187)
Q Consensus 81 ~~~~~~~~~~~~~~~~~D~i~~d~~~~~--~~~~~~~~~~~L~~ 122 (187)
.+.++.+ ..+||+||+|+.... ....++...+.|++
T Consensus 155 ~~~L~~~------~~~fDvV~lDP~y~~~~~saavkk~~~~lr~ 192 (258)
T 2oyr_A 155 LTALTDI------TPRPQVVYLDPMFPHKQKSALVKKEMRVFQS 192 (258)
T ss_dssp HHHSTTC------SSCCSEEEECCCCCCCCC-----HHHHHHHH
T ss_pred HHHHHhC------cccCCEEEEcCCCCCcccchHHHHHHHHHHH
Confidence 9876653 247999999963221 12333444455544
No 264
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.11 E-value=2.5e-10 Score=86.68 Aligned_cols=91 Identities=10% Similarity=0.108 Sum_probs=68.6
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029803 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 83 (187)
Q Consensus 4 ~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 83 (187)
.+.+.+-+...+...++.+|||||||+|..+..++.. ..+|+++|+++++++.+++++.. ..+++++++|+.+.
T Consensus 14 d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~avEid~~~~~~~~~~~~~---~~~v~~i~~D~~~~ 87 (255)
T 3tqs_A 14 DSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE---CDNLALVEIDRDLVAFLQKKYNQ---QKNITIYQNDALQF 87 (255)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT---SSEEEEEECCHHHHHHHHHHHTT---CTTEEEEESCTTTC
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHhh---CCCcEEEEcchHhC
Confidence 3444555555556667889999999999999999985 46999999999999999999864 34799999999874
Q ss_pred -HHHHhhcccCCCceeEEEEeCC
Q 029803 84 -LDQLLKYSENEGSFDYAFVDAD 105 (187)
Q Consensus 84 -~~~~~~~~~~~~~~D~i~~d~~ 105 (187)
++.+. ..++|| |+.+..
T Consensus 88 ~~~~~~----~~~~~~-vv~NlP 105 (255)
T 3tqs_A 88 DFSSVK----TDKPLR-VVGNLP 105 (255)
T ss_dssp CGGGSC----CSSCEE-EEEECC
T ss_pred CHHHhc----cCCCeE-EEecCC
Confidence 23220 135688 666653
No 265
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.11 E-value=1e-10 Score=92.65 Aligned_cols=98 Identities=9% Similarity=0.098 Sum_probs=78.0
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++.+|||||||+|..+..+++.+| +.+++++|+ +.+++.+++. .+++++.+|+.+. + ..
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~~---~-------p~ 246 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFP-KLKCIVFDR-PQVVENLSGS-------NNLTYVGGDMFTS---I-------PN 246 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCCB-------TTEEEEECCTTTC---C-------CC
T ss_pred cccCceEEEeCCCccHHHHHHHHHCC-CCeEEEeeC-HHHHhhcccC-------CCcEEEeccccCC---C-------CC
Confidence 45678999999999999999999887 789999999 9888877641 2499999998641 1 34
Q ss_pred eeEEEEeCCC---cc--cHHHHHHHHhccCC---CeEEEEeCCCC
Q 029803 97 FDYAFVDADK---DN--YCNYHERLMKLLKV---GGIAVYDNTLW 133 (187)
Q Consensus 97 ~D~i~~d~~~---~~--~~~~~~~~~~~L~~---gG~lv~~~~~~ 133 (187)
||+|++...- .. ...+++++.+.|+| ||.+++.+...
T Consensus 247 ~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 247 ADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEE
T ss_pred ccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeec
Confidence 9999987532 22 23789999999999 99998876654
No 266
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.10 E-value=8.6e-10 Score=84.39 Aligned_cols=110 Identities=12% Similarity=0.026 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH-
Q 029803 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV- 83 (187)
Q Consensus 5 ~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~- 83 (187)
+.+.+-+...+...++ +|||||||+|..+..++.. +.+|+++|+++++++.+++++. ..+++++++|+.+.
T Consensus 33 ~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~---~~~V~avEid~~~~~~l~~~~~----~~~v~vi~~D~l~~~ 104 (271)
T 3fut_A 33 EAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA---GAEVTAIEKDLRLRPVLEETLS----GLPVRLVFQDALLYP 104 (271)
T ss_dssp HHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT---TCCEEEEESCGGGHHHHHHHTT----TSSEEEEESCGGGSC
T ss_pred HHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcC----CCCEEEEECChhhCC
Confidence 3444444444455666 9999999999999999986 4699999999999999999875 24799999999874
Q ss_pred HHHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhc-cCCCeEEEEe
Q 029803 84 LDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKL-LKVGGIAVYD 129 (187)
Q Consensus 84 ~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~-L~~gG~lv~~ 129 (187)
++. ...+|.|+.+.........+..++.. .-+.+++++.
T Consensus 105 ~~~-------~~~~~~iv~NlPy~iss~il~~ll~~~~~~~~~lm~Q 144 (271)
T 3fut_A 105 WEE-------VPQGSLLVANLPYHIATPLVTRLLKTGRFARLVFLVQ 144 (271)
T ss_dssp GGG-------SCTTEEEEEEECSSCCHHHHHHHHHHCCEEEEEEEEE
T ss_pred hhh-------ccCccEEEecCcccccHHHHHHHhcCCCCCEEEEEee
Confidence 221 13689888876444444444444433 1134555553
No 267
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.07 E-value=4.4e-10 Score=93.85 Aligned_cols=119 Identities=10% Similarity=0.003 Sum_probs=89.0
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCC-----------------CCEEEEEeCCcchHHHHHHHHHh
Q 029803 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE-----------------DGQITAIDVNRETYEIGLPIIKK 66 (187)
Q Consensus 4 ~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~-----------------~~~v~~iD~~~~~~~~a~~~~~~ 66 (187)
++.+..++..++...+..+|+|.+||+|...+.++..+.. ..+++++|+++.++..|+.++..
T Consensus 154 P~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l 233 (541)
T 2ar0_A 154 PRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLL 233 (541)
T ss_dssp CHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHH
Confidence 3445566666665556679999999999999888765421 13799999999999999999887
Q ss_pred cCCCC----cEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCCc-----------------ccHHHHHHHHhccCCCeE
Q 029803 67 AGVDH----KINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-----------------NYCNYHERLMKLLKVGGI 125 (187)
Q Consensus 67 ~~~~~----~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~~-----------------~~~~~~~~~~~~L~~gG~ 125 (187)
.+... +..+.++|++..... ...+||+|+.++... ....+++.+.+.|+|||.
T Consensus 234 ~gi~~~~~~~~~I~~gDtL~~~~~------~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr 307 (541)
T 2ar0_A 234 HDIEGNLDHGGAIRLGNTLGSDGE------NLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGR 307 (541)
T ss_dssp TTCCCBGGGTBSEEESCTTSHHHH------TSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEE
T ss_pred hCCCccccccCCeEeCCCcccccc------cccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCE
Confidence 77653 278899998764321 136899999985321 123689999999999998
Q ss_pred EEE
Q 029803 126 AVY 128 (187)
Q Consensus 126 lv~ 128 (187)
+++
T Consensus 308 ~a~ 310 (541)
T 2ar0_A 308 AAV 310 (541)
T ss_dssp EEE
T ss_pred EEE
Confidence 766
No 268
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.04 E-value=3.3e-10 Score=89.93 Aligned_cols=98 Identities=12% Similarity=0.088 Sum_probs=77.4
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..+..+|||||||+|..+..+++..| +.+++++|+ +.+++.+++ . .+++++.+|..+ + + .+
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~--~-~-------~~ 251 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIFP-HLKCTVFDQ-PQVVGNLTG------N-ENLNFVGGDMFK--S-I-------PS 251 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHCT-TSEEEEEEC-HHHHSSCCC------C-SSEEEEECCTTT--C-C-------CC
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEecc-HHHHhhccc------C-CCcEEEeCccCC--C-C-------CC
Confidence 45678999999999999999999987 789999999 787776653 2 349999999865 1 1 35
Q ss_pred eeEEEEeCCC---cc--cHHHHHHHHhccCC---CeEEEEeCCCC
Q 029803 97 FDYAFVDADK---DN--YCNYHERLMKLLKV---GGIAVYDNTLW 133 (187)
Q Consensus 97 ~D~i~~d~~~---~~--~~~~~~~~~~~L~~---gG~lv~~~~~~ 133 (187)
||+|++.... .. ...+++++.+.|+| ||.+++.+...
T Consensus 252 ~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 252 ADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISI 296 (358)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEE
T ss_pred ceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEecc
Confidence 9999987532 22 34789999999999 99998876654
No 269
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.02 E-value=3.5e-11 Score=91.90 Aligned_cols=98 Identities=11% Similarity=0.011 Sum_probs=67.8
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHH-HHhcCCCCcEEEE--EcchHHHHHHHhhcccCC
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPI-IKKAGVDHKINFI--ESEALSVLDQLLKYSENE 94 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~-~~~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~ 94 (187)
.++.+|||+|||+|.++..+++. ++|+++|+++ ++..+++. ........++.++ ++|+.++ ..
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l---------~~ 138 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTL---------PV 138 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTS---------CC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHC---------CC
Confidence 45679999999999999998875 6899999998 43322211 0000111157888 8888652 14
Q ss_pred CceeEEEEeCCC--ccc-------HHHHHHHHhccCCCe--EEEEe
Q 029803 95 GSFDYAFVDADK--DNY-------CNYHERLMKLLKVGG--IAVYD 129 (187)
Q Consensus 95 ~~~D~i~~d~~~--~~~-------~~~~~~~~~~L~~gG--~lv~~ 129 (187)
++||+|++|... ... ...++.+.+.|+||| .+++.
T Consensus 139 ~~fD~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~k 184 (265)
T 2oxt_A 139 ERTDVIMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVK 184 (265)
T ss_dssp CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCCcEEEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEE
Confidence 789999998541 111 126788889999999 88884
No 270
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.02 E-value=4.3e-10 Score=86.79 Aligned_cols=90 Identities=13% Similarity=0.157 Sum_probs=67.0
Q ss_pred HcCCCEEEEEcccc------cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEE-EEcchHHHHHHHhh
Q 029803 17 LVNAKKTIEIGVFT------GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINF-IESEALSVLDQLLK 89 (187)
Q Consensus 17 ~~~~~~vLeiG~g~------G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~ 89 (187)
..++.+|||+|||+ |. ..++...+++++|+++|+++. + .++++ +++|+.+..
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v-------------~~v~~~i~gD~~~~~----- 119 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V-------------SDADSTLIGDCATVH----- 119 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B-------------CSSSEEEESCGGGCC-----
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C-------------CCCEEEEECccccCC-----
Confidence 45677999999944 66 555666665789999999998 1 24778 999986531
Q ss_pred cccCCCceeEEEEeCCCc--------------ccHHHHHHHHhccCCCeEEEEeC
Q 029803 90 YSENEGSFDYAFVDADKD--------------NYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 90 ~~~~~~~~D~i~~d~~~~--------------~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
..++||+|+++.... .+...++.+.+.|+|||.+++..
T Consensus 120 ---~~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~ 171 (290)
T 2xyq_A 120 ---TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI 171 (290)
T ss_dssp ---CSSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---ccCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 136899999974321 13467899999999999999863
No 271
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.02 E-value=5.1e-11 Score=91.51 Aligned_cols=98 Identities=7% Similarity=-0.017 Sum_probs=68.4
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHH-HhcCCCCcEEEE--EcchHHHHHHHhhcccCC
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPII-KKAGVDHKINFI--ESEALSVLDQLLKYSENE 94 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~-~~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~ 94 (187)
.++.+|||+|||+|.++..+++. ++|+++|+++ ++..++++. .......+++++ ++|+.++ ..
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l---------~~ 146 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKM---------EP 146 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGC---------CC
T ss_pred CCCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhC---------CC
Confidence 35679999999999999999875 5899999998 533332210 001111257888 8898652 14
Q ss_pred CceeEEEEeCCCc--c-----c--HHHHHHHHhccCCCe--EEEEe
Q 029803 95 GSFDYAFVDADKD--N-----Y--CNYHERLMKLLKVGG--IAVYD 129 (187)
Q Consensus 95 ~~~D~i~~d~~~~--~-----~--~~~~~~~~~~L~~gG--~lv~~ 129 (187)
++||+|++|.... . . ...++.+.+.|+||| .+++.
T Consensus 147 ~~fD~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 147 FQADTVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred CCcCEEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEE
Confidence 7899999985411 1 1 135788889999999 88884
No 272
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.98 E-value=2.4e-10 Score=89.01 Aligned_cols=96 Identities=9% Similarity=0.016 Sum_probs=66.9
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeC----CcchHHHHHHHHHhcCCCCcEEEEEc-chHHHHHHHhhccc
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDV----NRETYEIGLPIIKKAGVDHKINFIES-EALSVLDQLLKYSE 92 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~----~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~ 92 (187)
.++.+|||+|||+|.++..+++. ++|+++|+ ++.+++.+. .+..+ .++++++++ |+.+.
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~~--~~~~~-~~~v~~~~~~D~~~l--------- 144 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPIP--MSTYG-WNLVRLQSGVDVFFI--------- 144 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCCC--CCSTT-GGGEEEECSCCTTTS---------
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHHH--hhhcC-CCCeEEEeccccccC---------
Confidence 34679999999999999999875 48999999 454332111 01111 146899998 87642
Q ss_pred CCCceeEEEEeCCCc--c----c---HHHHHHHHhccCCCeEEEEe
Q 029803 93 NEGSFDYAFVDADKD--N----Y---CNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 93 ~~~~~D~i~~d~~~~--~----~---~~~~~~~~~~L~~gG~lv~~ 129 (187)
..++||+|++|.... . . ...++.+.+.|+|||.+++.
T Consensus 145 ~~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 145 PPERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp CCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CcCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 136899999986431 1 1 13577778999999999984
No 273
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.98 E-value=1.7e-09 Score=81.62 Aligned_cols=62 Identities=18% Similarity=0.201 Sum_probs=53.0
Q ss_pred HHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029803 16 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 83 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 83 (187)
...++.+|||||||+|..+..++.. ..+|+++|+++++++.+++++... ++++++++|+.+.
T Consensus 27 ~~~~~~~VLDiG~G~G~lt~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~---~~v~~~~~D~~~~ 88 (244)
T 1qam_A 27 RLNEHDNIFEIGSGKGHFTLELVQR---CNFVTAIEIDHKLCKTTENKLVDH---DNFQVLNKDILQF 88 (244)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHTTTC---CSEEEECCCGGGC
T ss_pred CCCCCCEEEEEeCCchHHHHHHHHc---CCeEEEEECCHHHHHHHHHhhccC---CCeEEEEChHHhC
Confidence 3456789999999999999999987 369999999999999999987532 4799999999763
No 274
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.93 E-value=7.8e-10 Score=92.34 Aligned_cols=118 Identities=10% Similarity=0.082 Sum_probs=86.0
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCC--------------CCEEEEEeCCcchHHHHHHHHHhcCC
Q 029803 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE--------------DGQITAIDVNRETYEIGLPIIKKAGV 69 (187)
Q Consensus 4 ~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~--------------~~~v~~iD~~~~~~~~a~~~~~~~~~ 69 (187)
++.+..+|..++...+ .+|+|.+||+|...+.++..+.. ..+++++|+++.++..|+.++..+++
T Consensus 230 P~~Vv~lmv~ll~p~~-~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi 308 (544)
T 3khk_A 230 PKSIVTLIVEMLEPYK-GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGI 308 (544)
T ss_dssp CHHHHHHHHHHHCCCS-EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHhcCC-CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCC
Confidence 4556667766665433 49999999999988877654320 35899999999999999999998888
Q ss_pred CCcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCCcc--------------------------------cHHHHHHHH
Q 029803 70 DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--------------------------------YCNYHERLM 117 (187)
Q Consensus 70 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~~~--------------------------------~~~~~~~~~ 117 (187)
..++.+.++|++... . ....+||+|+.++.... ...+++.++
T Consensus 309 ~~~i~i~~gDtL~~~-~-----~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l 382 (544)
T 3khk_A 309 DFNFGKKNADSFLDD-Q-----HPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHML 382 (544)
T ss_dssp CCBCCSSSCCTTTSC-S-----CTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHH
T ss_pred CcccceeccchhcCc-c-----cccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHH
Confidence 765555888876421 0 12468999998752110 025889999
Q ss_pred hccCCCeEEEE
Q 029803 118 KLLKVGGIAVY 128 (187)
Q Consensus 118 ~~L~~gG~lv~ 128 (187)
+.|+|||.+.+
T Consensus 383 ~~Lk~gGr~ai 393 (544)
T 3khk_A 383 YHLAPTGSMAL 393 (544)
T ss_dssp HTEEEEEEEEE
T ss_pred HHhccCceEEE
Confidence 99999998655
No 275
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.87 E-value=9.6e-09 Score=86.74 Aligned_cols=100 Identities=12% Similarity=0.092 Sum_probs=75.6
Q ss_pred CCEEEEEcccccHHHHH---HHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 20 AKKTIEIGVFTGYSLLL---TALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~---la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
...|+++|||+|-.... .++......+|++||-++ ++..+++.+..+++.++++++++|+.+.- -+++
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~--------LPEK 428 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWV--------APEK 428 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCC--------CSSC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceecc--------CCcc
Confidence 35799999999988444 333332234799999987 67788999999999999999999998751 1479
Q ss_pred eeEEEEeC-----CCcccHHHHHHHHhccCCCeEEEE
Q 029803 97 FDYAFVDA-----DKDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 97 ~D~i~~d~-----~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
.|+|+..- ..+.....+...-+.|||||+++=
T Consensus 429 VDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimiP 465 (637)
T 4gqb_A 429 ADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSIP 465 (637)
T ss_dssp EEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEES
T ss_pred cCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEcc
Confidence 99998652 234445666666789999999864
No 276
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.87 E-value=3.8e-09 Score=81.18 Aligned_cols=74 Identities=12% Similarity=0.101 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCC-CCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029803 5 TIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE-DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 83 (187)
Q Consensus 5 ~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 83 (187)
+.+.+-+...+...++.+|||||||+|..+..++...+. +++|+++|+++++++.++++. ..+++++++|+.+.
T Consensus 28 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 28 HGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGDALTF 102 (279)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESCGGGC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECChhcC
Confidence 344444444455667889999999999999999987542 245999999999999999983 34799999999874
No 277
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.86 E-value=3.6e-09 Score=90.88 Aligned_cols=120 Identities=13% Similarity=0.090 Sum_probs=85.4
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhC---C--------------------------------------
Q 029803 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTI---P-------------------------------------- 42 (187)
Q Consensus 4 ~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~---~-------------------------------------- 42 (187)
.+..+..+-.+....+...+||.+||+|..++.++... +
T Consensus 175 ~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~ 254 (703)
T 3v97_A 175 KETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAE 254 (703)
T ss_dssp CHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcccc
Confidence 34455555555555677899999999999998877642 1
Q ss_pred CCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCC-------cccHHHHHH
Q 029803 43 EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-------DNYCNYHER 115 (187)
Q Consensus 43 ~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~-------~~~~~~~~~ 115 (187)
+..+++++|+++.+++.|++|+..+++.+.+++.++|+.+..... ..++||+|++++.. .....+++.
T Consensus 255 ~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~-----~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~ 329 (703)
T 3v97_A 255 YSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL-----PKGPYGTVLSNPPYGERLDSEPALIALHSL 329 (703)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSC-----TTCCCCEEEECCCCCC---CCHHHHHHHHH
T ss_pred CCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCcccc-----ccCCCCEEEeCCCccccccchhHHHHHHHH
Confidence 125899999999999999999999999888999999997642110 12389999998542 122334443
Q ss_pred H---HhccCCCeEEEE
Q 029803 116 L---MKLLKVGGIAVY 128 (187)
Q Consensus 116 ~---~~~L~~gG~lv~ 128 (187)
+ ++.+.|||.+.+
T Consensus 330 l~~~lk~~~~g~~~~i 345 (703)
T 3v97_A 330 LGRIMKNQFGGWNLSL 345 (703)
T ss_dssp HHHHHHHHCTTCEEEE
T ss_pred HHHHHHhhCCCCeEEE
Confidence 3 445557886655
No 278
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.84 E-value=1.2e-10 Score=87.79 Aligned_cols=102 Identities=16% Similarity=0.186 Sum_probs=72.8
Q ss_pred HHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029803 14 LLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 93 (187)
Q Consensus 14 l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 93 (187)
.+...++.+|||||||+|..+..++.. ..+|+++|+++++++.+++++. ...+++++++|+.+.. + ..
T Consensus 24 ~~~~~~~~~VLDiG~G~G~~~~~l~~~---~~~v~~id~~~~~~~~a~~~~~---~~~~v~~~~~D~~~~~--~----~~ 91 (245)
T 1yub_A 24 QLNLKETDTVYEIGTGKGHLTTKLAKI---SKQVTSIELDSHLFNLSSEKLK---LNTRVTLIHQDILQFQ--F----PN 91 (245)
T ss_dssp HCCCCSSEEEEECSCCCSSCSHHHHHH---SSEEEESSSSCSSSSSSSCTTT---TCSEEEECCSCCTTTT--C----CC
T ss_pred hcCCCCCCEEEEEeCCCCHHHHHHHHh---CCeEEEEECCHHHHHHHHHHhc---cCCceEEEECChhhcC--c----cc
Confidence 334456779999999999999999987 3799999999999999988765 2357999999987641 1 01
Q ss_pred CCceeEEEEeCCCccc----H----------HHH----HHHHhccCCCeEEEE
Q 029803 94 EGSFDYAFVDADKDNY----C----------NYH----ERLMKLLKVGGIAVY 128 (187)
Q Consensus 94 ~~~~D~i~~d~~~~~~----~----------~~~----~~~~~~L~~gG~lv~ 128 (187)
.++| .|+++...... . ..+ +.+.++|+|||.+.+
T Consensus 92 ~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v 143 (245)
T 1yub_A 92 KQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGL 143 (245)
T ss_dssp SSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHH
T ss_pred CCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhh
Confidence 2578 67766422111 1 122 557788999988765
No 279
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.83 E-value=1.3e-08 Score=77.02 Aligned_cols=110 Identities=16% Similarity=0.099 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH-H
Q 029803 6 IHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV-L 84 (187)
Q Consensus 6 ~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~ 84 (187)
...+-+...+...++.+|||||||+|..+..++.. + ..+|+++|+++.+++.++++ . ..+++++++|+.+. +
T Consensus 18 ~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~-~~~v~avEid~~~~~~~~~~----~-~~~v~~i~~D~~~~~~ 90 (249)
T 3ftd_A 18 GVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH-P-LKKLYVIELDREMVENLKSI----G-DERLEVINEDASKFPF 90 (249)
T ss_dssp HHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS-C-CSEEEEECCCHHHHHHHTTS----C-CTTEEEECSCTTTCCG
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc-C-CCeEEEEECCHHHHHHHHhc----c-CCCeEEEEcchhhCCh
Confidence 33334444444557789999999999999999885 2 47999999999999999877 2 34699999999764 2
Q ss_pred HHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhc--cCCCeEEEEe
Q 029803 85 DQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKL--LKVGGIAVYD 129 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~--L~~gG~lv~~ 129 (187)
+.. ...+ .|+.+.........+..+++. .-+.+++++.
T Consensus 91 ~~~------~~~~-~vv~NlPy~i~~~il~~ll~~~~~~~~~~~m~Q 130 (249)
T 3ftd_A 91 CSL------GKEL-KVVGNLPYNVASLIIENTVYNKDCVPLAVFMVQ 130 (249)
T ss_dssp GGS------CSSE-EEEEECCTTTHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred hHc------cCCc-EEEEECchhccHHHHHHHHhcCCCCceEEEEEe
Confidence 221 1233 666665444444455555443 2345666664
No 280
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.82 E-value=1.4e-08 Score=84.68 Aligned_cols=121 Identities=13% Similarity=0.074 Sum_probs=92.0
Q ss_pred CcHHHHHHHHHHHH----HcCCCEEEEEcccccHHHHHHHhhCC--CCCEEEEEeCCcchHHHHHHHHHhcCCC-CcEEE
Q 029803 3 LLTIHGQLMAMLLR----LVNAKKTIEIGVFTGYSLLLTALTIP--EDGQITAIDVNRETYEIGLPIIKKAGVD-HKINF 75 (187)
Q Consensus 3 ~~~~~~~ll~~l~~----~~~~~~vLeiG~g~G~~~~~la~~~~--~~~~v~~iD~~~~~~~~a~~~~~~~~~~-~~~~~ 75 (187)
.++.+..+|..++. ..++.+|+|.+||+|...+.++..+. ...+++++|+++.++..|+.++..++.. .+..+
T Consensus 201 TP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I 280 (542)
T 3lkd_A 201 TPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFL 280 (542)
T ss_dssp CCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred ccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccce
Confidence 34667777777777 34667999999999999988888763 2578999999999999999999888875 46899
Q ss_pred EEcchHHHH-HHHhhcccCCCceeEEEEeCCC------c----------cc----------HHHHHHHHhccC-CCeEEE
Q 029803 76 IESEALSVL-DQLLKYSENEGSFDYAFVDADK------D----------NY----------CNYHERLMKLLK-VGGIAV 127 (187)
Q Consensus 76 ~~~d~~~~~-~~~~~~~~~~~~~D~i~~d~~~------~----------~~----------~~~~~~~~~~L~-~gG~lv 127 (187)
.++|++..- +. ....+||+|+.++.. . .+ ..++..+.+.|+ +||.+.
T Consensus 281 ~~gDtL~~d~p~-----~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a 355 (542)
T 3lkd_A 281 HNADTLDEDWPT-----QEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMA 355 (542)
T ss_dssp EESCTTTSCSCC-----SSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEE
T ss_pred Eecceecccccc-----cccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEE
Confidence 999987530 11 124689999987421 0 01 237899999999 999875
Q ss_pred E
Q 029803 128 Y 128 (187)
Q Consensus 128 ~ 128 (187)
+
T Consensus 356 ~ 356 (542)
T 3lkd_A 356 I 356 (542)
T ss_dssp E
T ss_pred E
Confidence 5
No 281
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.82 E-value=1.8e-08 Score=76.29 Aligned_cols=105 Identities=12% Similarity=0.008 Sum_probs=68.4
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029803 4 LTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 83 (187)
Q Consensus 4 ~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 83 (187)
.+.....+-..+...++.+|||||||+|..+. ++. .+ ..+|+++|+++++++.+++++... ++++++++|+.+.
T Consensus 6 d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~~-~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~ 79 (252)
T 1qyr_A 6 DQFVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG-ER-LDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTF 79 (252)
T ss_dssp CHHHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-TT-CSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGC
T ss_pred CHHHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-CC-CCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhC
Confidence 34444444444556677899999999999999 654 22 234999999999999999876532 4799999999773
Q ss_pred -HHHHhhcccCCCceeEEEEeCCCcccHHHHHHHH
Q 029803 84 -LDQLLKYSENEGSFDYAFVDADKDNYCNYHERLM 117 (187)
Q Consensus 84 -~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~ 117 (187)
++..... .+..|.|+...........+.++.
T Consensus 80 ~~~~~~~~---~~~~~~vvsNlPY~i~~~il~~ll 111 (252)
T 1qyr_A 80 NFGELAEK---MGQPLRVFGNLPYNISTPLMFHLF 111 (252)
T ss_dssp CHHHHHHH---HTSCEEEEEECCTTTHHHHHHHHH
T ss_pred CHHHhhcc---cCCceEEEECCCCCccHHHHHHHH
Confidence 3332100 023567777654433333443333
No 282
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.80 E-value=1.2e-08 Score=86.46 Aligned_cols=106 Identities=11% Similarity=-0.031 Sum_probs=73.9
Q ss_pred CCEEEEEcccccHHHHHHHhhCC------------CCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHH
Q 029803 20 AKKTIEIGVFTGYSLLLTALTIP------------EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 87 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~la~~~~------------~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 87 (187)
.+.|||+|||+|-.+...+.+.. ...+|++||.++.+....+.... +++.++++++++|+.+.-...
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 46899999999998643322211 13599999999977766665544 788889999999998863210
Q ss_pred hhcccCCCceeEEEEeC-----CCcccHHHHHHHHhccCCCeEEEE
Q 029803 88 LKYSENEGSFDYAFVDA-----DKDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 88 ~~~~~~~~~~D~i~~d~-----~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
.. ...++.|+|+... ..+...+.+..+-+.|+|||+++-
T Consensus 489 ~~--~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~iP 532 (745)
T 3ua3_A 489 KD--RGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISIP 532 (745)
T ss_dssp HH--TTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEES
T ss_pred cc--CCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEEC
Confidence 00 1247999998763 223445666767789999999874
No 283
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.75 E-value=1.4e-08 Score=77.43 Aligned_cols=112 Identities=13% Similarity=0.159 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHH
Q 029803 7 HGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 86 (187)
Q Consensus 7 ~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 86 (187)
...++..+-. .++..+||+.+|+|..++.+++. ..+++.+|.+++.++..++|++. ..+++++++|+...+..
T Consensus 80 l~~yf~~l~~-~n~~~~LDlfaGSGaLgiEaLS~---~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~ 152 (283)
T 2oo3_A 80 FLEYISVIKQ-INLNSTLSYYPGSPYFAINQLRS---QDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNA 152 (283)
T ss_dssp GHHHHHHHHH-HSSSSSCCEEECHHHHHHHHSCT---TSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHH
T ss_pred HHHHHHHHHH-hcCCCceeEeCCcHHHHHHHcCC---CCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHH
Confidence 3456666555 46778999999999999998873 57999999999999999999864 45799999999988877
Q ss_pred HhhcccCCCceeEEEEeCCCc---ccHHHHHHHHh--ccCCCeEEEE
Q 029803 87 LLKYSENEGSFDYAFVDADKD---NYCNYHERLMK--LLKVGGIAVY 128 (187)
Q Consensus 87 ~~~~~~~~~~~D~i~~d~~~~---~~~~~~~~~~~--~L~~gG~lv~ 128 (187)
+... ..+||+||+|+..+ .+...++.+.+ .+.++|++++
T Consensus 153 l~~~---~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 153 LLPP---PEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCV 196 (283)
T ss_dssp HCSC---TTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred hcCC---CCCccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEE
Confidence 6432 45799999998543 45555555543 6677888776
No 284
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.73 E-value=7.9e-08 Score=82.71 Aligned_cols=120 Identities=11% Similarity=0.029 Sum_probs=81.2
Q ss_pred CcHHHHHHHHHHHH--H----cCCCEEEEEcccccHHHHHHHhhCC--CCCEEEEEeCCcchHHHH--HHHHHhcCCC--
Q 029803 3 LLTIHGQLMAMLLR--L----VNAKKTIEIGVFTGYSLLLTALTIP--EDGQITAIDVNRETYEIG--LPIIKKAGVD-- 70 (187)
Q Consensus 3 ~~~~~~~ll~~l~~--~----~~~~~vLeiG~g~G~~~~~la~~~~--~~~~v~~iD~~~~~~~~a--~~~~~~~~~~-- 70 (187)
.++.++.++..++. . .++.+|||.|||+|...+.++..++ ...+++++|+++.+++.| +.++..+.+.
T Consensus 299 TP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhG 378 (878)
T 3s1s_A 299 TDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSS 378 (878)
T ss_dssp CCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBT
T ss_pred CCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcC
Confidence 35667777777632 1 2467999999999999999988764 136899999999999999 5554332221
Q ss_pred -CcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCCc--------------------------------ccHHHHHHHH
Q 029803 71 -HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--------------------------------NYCNYHERLM 117 (187)
Q Consensus 71 -~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~~--------------------------------~~~~~~~~~~ 117 (187)
....+...|..+.... ...+||+|+.++... .+..+++.+.
T Consensus 379 i~~~~I~~dD~L~~~~~------~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al 452 (878)
T 3s1s_A 379 NNAPTITGEDVCSLNPE------DFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVT 452 (878)
T ss_dssp TBCCEEECCCGGGCCGG------GGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHH
T ss_pred CCcceEEecchhccccc------ccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHH
Confidence 1235556665542111 136899999885320 0234678888
Q ss_pred hccCCCeEEEE
Q 029803 118 KLLKVGGIAVY 128 (187)
Q Consensus 118 ~~L~~gG~lv~ 128 (187)
++|++||.+.+
T Consensus 453 ~lLKpGGrLAf 463 (878)
T 3s1s_A 453 ELVQDGTVISA 463 (878)
T ss_dssp HHSCTTCEEEE
T ss_pred HhcCCCcEEEE
Confidence 99999998876
No 285
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.71 E-value=5.1e-09 Score=74.65 Aligned_cols=89 Identities=9% Similarity=0.117 Sum_probs=67.1
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++.+||++|||. +.+|+++++++.|++++. .++++.++|+.+.... ....++
T Consensus 10 ~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~-----~~~~~~~~d~~~~~~~----~~~~~~ 63 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTG-----NEGRVSVENIKQLLQS----AHKESS 63 (176)
T ss_dssp CCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTT-----TTSEEEEEEGGGGGGG----CCCSSC
T ss_pred CCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhcc-----cCcEEEEechhcCccc----cCCCCC
Confidence 45778999999975 238999999999998753 2488999998754210 002578
Q ss_pred eeEEEEeC---CC-cccHHHHHHHHhccCCCeEEEEeCC
Q 029803 97 FDYAFVDA---DK-DNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 97 ~D~i~~d~---~~-~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
||+|++.. .. .+....++++.++|||||.+++.+.
T Consensus 64 fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 64 FDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp EEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEcc
Confidence 99999853 22 5668899999999999999999543
No 286
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.65 E-value=1.5e-07 Score=71.72 Aligned_cols=91 Identities=8% Similarity=0.063 Sum_probs=69.2
Q ss_pred HHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHh
Q 029803 9 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLL 88 (187)
Q Consensus 9 ~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 88 (187)
+++..+ ...++..+||.+||.|..+..+++. +++|+++|.+|++++.+++ ++. +++++++++..++...+.
T Consensus 13 e~le~L-~~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~ 83 (285)
T 1wg8_A 13 EALDLL-AVRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLA 83 (285)
T ss_dssp HHHHHH-TCCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHH
T ss_pred HHHHhh-CCCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHH
Confidence 344433 3456789999999999999999986 6899999999999999998 643 589999999977633332
Q ss_pred hcccCCCceeEEEEeCCCcccH
Q 029803 89 KYSENEGSFDYAFVDADKDNYC 110 (187)
Q Consensus 89 ~~~~~~~~~D~i~~d~~~~~~~ 110 (187)
.. ..+++|.|++|...+.++
T Consensus 84 ~~--g~~~vDgIL~DLGvSS~Q 103 (285)
T 1wg8_A 84 AL--GVERVDGILADLGVSSFH 103 (285)
T ss_dssp HT--TCSCEEEEEEECSCCHHH
T ss_pred Hc--CCCCcCEEEeCCcccccc
Confidence 21 235799999997655544
No 287
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.46 E-value=7.8e-07 Score=61.13 Aligned_cols=80 Identities=8% Similarity=-0.003 Sum_probs=58.3
Q ss_pred cCCCEEEEEccccc-HHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 18 VNAKKTIEIGVFTG-YSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 18 ~~~~~vLeiG~g~G-~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..+.+|||||||.| ..+..+++.. +..|+++|++|..++ +++.|.++....+ -..
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~----------------~v~dDiF~P~~~~------Y~~ 89 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGG----------------IVRDDITSPRMEI------YRG 89 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTT----------------EECCCSSSCCHHH------HTT
T ss_pred CCCCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccc----------------eEEccCCCCcccc------cCC
Confidence 34679999999999 5999998742 678999999998765 7777876632222 158
Q ss_pred eeEEEEeCCCcccHHHHHHHHhccC
Q 029803 97 FDYAFVDADKDNYCNYHERLMKLLK 121 (187)
Q Consensus 97 ~D~i~~d~~~~~~~~~~~~~~~~L~ 121 (187)
||+|+.-..+...+..+-.+.+...
T Consensus 90 ~DLIYsirPP~El~~~i~~lA~~v~ 114 (153)
T 2k4m_A 90 AALIYSIRPPAEIHSSLMRVADAVG 114 (153)
T ss_dssp EEEEEEESCCTTTHHHHHHHHHHHT
T ss_pred cCEEEEcCCCHHHHHHHHHHHHHcC
Confidence 9999876666676666665655443
No 288
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.39 E-value=1.6e-06 Score=67.69 Aligned_cols=86 Identities=16% Similarity=0.157 Sum_probs=66.6
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++..++|.++|.|..+..+++.+.++++|+++|.++++++.++ ++ ..+++++++++..++...+... +-.++
T Consensus 55 i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL----~~~Rv~lv~~nF~~l~~~L~~~-g~~~~ 128 (347)
T 3tka_A 55 IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI----DDPRFSIIHGPFSALGEYVAER-DLIGK 128 (347)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC----CCTTEEEEESCGGGHHHHHHHT-TCTTC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh----cCCcEEEEeCCHHHHHHHHHhc-CCCCc
Confidence 346679999999999999999998876899999999999999884 33 2468999999987765444322 11136
Q ss_pred eeEEEEeCCCcc
Q 029803 97 FDYAFVDADKDN 108 (187)
Q Consensus 97 ~D~i~~d~~~~~ 108 (187)
+|.|+.|...+.
T Consensus 129 vDgILfDLGVSS 140 (347)
T 3tka_A 129 IDGILLDLGVSS 140 (347)
T ss_dssp EEEEEEECSCCH
T ss_pred ccEEEECCccCH
Confidence 999999965544
No 289
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.20 E-value=3.5e-06 Score=70.21 Aligned_cols=121 Identities=13% Similarity=0.107 Sum_probs=86.7
Q ss_pred CcHHHHHHHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCC------------CCEEEEEeCCcchHHHHHHHHHhcCCC
Q 029803 3 LLTIHGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE------------DGQITAIDVNRETYEIGLPIIKKAGVD 70 (187)
Q Consensus 3 ~~~~~~~ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~------------~~~v~~iD~~~~~~~~a~~~~~~~~~~ 70 (187)
.++.+..++..++...++.+|+|-+||+|.+.+.....+.. ...++++|+++.++..|+.++-.++..
T Consensus 201 TP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~ 280 (530)
T 3ufb_A 201 TPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE 280 (530)
T ss_dssp CCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS
T ss_pred CcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc
Confidence 35677788888888778889999999999998877654421 246999999999999999998877765
Q ss_pred CcEEEEEcchHHH-HHHHhhcccCCCceeEEEEeCCCc-------------------ccHHHHHHHHhccC-------CC
Q 029803 71 HKINFIESEALSV-LDQLLKYSENEGSFDYAFVDADKD-------------------NYCNYHERLMKLLK-------VG 123 (187)
Q Consensus 71 ~~~~~~~~d~~~~-~~~~~~~~~~~~~~D~i~~d~~~~-------------------~~~~~~~~~~~~L~-------~g 123 (187)
...+.++|.+.. .... ....+||+|+.++... ....++..++..|+ +|
T Consensus 281 -~~~I~~~dtL~~~~~~~----~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~g 355 (530)
T 3ufb_A 281 -YPRIDPENSLRFPLREM----GDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNG 355 (530)
T ss_dssp -CCEEECSCTTCSCGGGC----CGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSC
T ss_pred -cccccccccccCchhhh----cccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCC
Confidence 356788887642 1111 1135799999885321 11346777877776 68
Q ss_pred eEEEE
Q 029803 124 GIAVY 128 (187)
Q Consensus 124 G~lv~ 128 (187)
|.+.+
T Consensus 356 Gr~av 360 (530)
T 3ufb_A 356 GRAAV 360 (530)
T ss_dssp CEEEE
T ss_pred ceEEE
Confidence 87655
No 290
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.13 E-value=1.5e-06 Score=65.84 Aligned_cols=105 Identities=14% Similarity=0.123 Sum_probs=63.6
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..+..+|||+|||.|.++.+++...+ ...++++|+.-+........ ...+ .++..+.+++.. ..+ ..++
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~-~~~v~g~dVGvDl~~~pi~~-~~~g--~~ii~~~~~~dv--~~l-----~~~~ 140 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKE-VSGVKGFTLGRDGHEKPMNV-QSLG--WNIITFKDKTDI--HRL-----EPVK 140 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTCCCCCCC-CBTT--GGGEEEECSCCT--TTS-----CCCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcC-CCcceeEEEeccCccccccc-CcCC--CCeEEEecccee--hhc-----CCCC
Confidence 44567899999999999998887543 45788888764431100000 0001 123334554311 111 2578
Q ss_pred eeEEEEeCCCc----cc-----HHHHHHHHhccCCC-eEEEEeCCCC
Q 029803 97 FDYAFVDADKD----NY-----CNYHERLMKLLKVG-GIAVYDNTLW 133 (187)
Q Consensus 97 ~D~i~~d~~~~----~~-----~~~~~~~~~~L~~g-G~lv~~~~~~ 133 (187)
||+|++|..+. .. ...++.+.+.|+|| |.+|+. ++.
T Consensus 141 ~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~K-Vf~ 186 (277)
T 3evf_A 141 CDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVK-VLA 186 (277)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE-ESC
T ss_pred ccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEE-ecC
Confidence 99999997443 11 12356677999999 999994 553
No 291
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.09 E-value=1.9e-05 Score=62.53 Aligned_cols=72 Identities=8% Similarity=0.170 Sum_probs=54.0
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
..++.++||+||+.|.++..+++. +++|++||+.+ +-.. +. . .++++++++|+....+ ...+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~-l~~~----l~--~-~~~V~~~~~d~~~~~~-------~~~~ 270 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGP-MAQS----LM--D-TGQVTWLREDGFKFRP-------TRSN 270 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSC-CCHH----HH--T-TTCEEEECSCTTTCCC-------CSSC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhh-cChh----hc--c-CCCeEEEeCccccccC-------CCCC
Confidence 357889999999999999999875 68999999764 2221 11 1 2469999999876432 2468
Q ss_pred eeEEEEeCCC
Q 029803 97 FDYAFVDADK 106 (187)
Q Consensus 97 ~D~i~~d~~~ 106 (187)
+|+|++|-..
T Consensus 271 ~D~vvsDm~~ 280 (375)
T 4auk_A 271 ISWMVCDMVE 280 (375)
T ss_dssp EEEEEECCSS
T ss_pred cCEEEEcCCC
Confidence 9999999754
No 292
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.06 E-value=1.8e-05 Score=61.06 Aligned_cols=57 Identities=12% Similarity=0.106 Sum_probs=46.9
Q ss_pred HHHHHHHHH--cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcC
Q 029803 9 QLMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG 68 (187)
Q Consensus 9 ~ll~~l~~~--~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~ 68 (187)
+++..++.. .++..|||++||+|.+++.++.. +.+++++|+++++++.|++++....
T Consensus 223 ~l~~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 223 ELAERLVRMFSFVGDVVLDPFAGTGTTLIAAARW---GRRALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp HHHHHHHHHHCCTTCEEEETTCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHHhc
Confidence 455555543 46789999999999999988774 5799999999999999999998654
No 293
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.06 E-value=3.2e-06 Score=64.24 Aligned_cols=101 Identities=12% Similarity=0.050 Sum_probs=63.3
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEc-chHHHHHHHhhcccCCC
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES-EALSVLDQLLKYSENEG 95 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~ 95 (187)
..+..+|||+|||.|.|+.+++...+ ...++++|+.......+... ...+ .+.+.+... |.. .+ ..+
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~g-v~sV~GvdvG~d~~~~pi~~-~~~g-~~ii~~~~~~dv~----~l-----~~~ 155 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLKN-VKKVMAFTLGVQGHEKPIMR-TTLG-WNLIRFKDKTDVF----NM-----EVI 155 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCCC-CBTT-GGGEEEECSCCGG----GS-----CCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcC-CCeeeeEEeccCcccccccc-ccCC-CceEEeeCCcchh----hc-----CCC
Confidence 45667999999999999999887554 56789999876532222110 0011 122333322 322 11 257
Q ss_pred ceeEEEEeCCCcc---------cHHHHHHHHhccCCC--eEEEEe
Q 029803 96 SFDYAFVDADKDN---------YCNYHERLMKLLKVG--GIAVYD 129 (187)
Q Consensus 96 ~~D~i~~d~~~~~---------~~~~~~~~~~~L~~g--G~lv~~ 129 (187)
++|+|++|..+.. ....++.+.+.|+|| |.+|+.
T Consensus 156 ~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~K 200 (282)
T 3gcz_A 156 PGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIK 200 (282)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEE
Confidence 8999999975431 112466667899999 999985
No 294
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.99 E-value=8.9e-06 Score=69.78 Aligned_cols=109 Identities=12% Similarity=0.040 Sum_probs=74.6
Q ss_pred CCCEEEEEcccccHHHHHHHhhC-------CC----CCEEEEEeCCcchHHHHHH--------------HHHhcCC----
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTI-------PE----DGQITAIDVNRETYEIGLP--------------IIKKAGV---- 69 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~-------~~----~~~v~~iD~~~~~~~~a~~--------------~~~~~~~---- 69 (187)
++-+|+|+|.|+|++.+.+.+.. |. ..+++++|..|-..+..++ .+..+..
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 45689999999999888876643 11 1579999986644444443 2222211
Q ss_pred ------C---CcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCCccc------HHHHHHHHhccCCCeEEEEe
Q 029803 70 ------D---HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNY------CNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 70 ------~---~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~~~~------~~~~~~~~~~L~~gG~lv~~ 129 (187)
. -.++++.||+.+.++.+... ....+|.+|+|+-.+.. ..++..+.+++++||.+...
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~--~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~ 210 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDS--LNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTF 210 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGG--GTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEES
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccc--cCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 1 14678999999988765210 13689999999743332 67899999999999998763
No 295
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.94 E-value=0.00013 Score=54.02 Aligned_cols=100 Identities=10% Similarity=0.049 Sum_probs=67.0
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEc-chHHHHHHHhhcccCCC
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES-EALSVLDQLLKYSENEG 95 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~ 95 (187)
..+...|||+||+.|.++.+++.... ..+|+++|+-+.--+.= ..++..|. +.+++..+ |.... ...
T Consensus 76 l~~g~~VvDLGaapGGWSq~~a~~~g-~~~V~avdvG~~ghe~P-~~~~s~gw-n~v~fk~gvDv~~~---------~~~ 143 (267)
T 3p8z_A 76 VIPEGRVIDLGCGRGGWSYYCAGLKK-VTEVRGYTKGGPGHEEP-VPMSTYGW-NIVKLMSGKDVFYL---------PPE 143 (267)
T ss_dssp SCCCEEEEEESCTTSHHHHHHHTSTT-EEEEEEECCCSTTSCCC-CCCCCTTT-TSEEEECSCCGGGC---------CCC
T ss_pred CCCCCEEEEcCCCCCcHHHHHHHhcC-CCEEEEEecCCCCccCc-chhhhcCc-CceEEEeccceeec---------CCc
Confidence 45677999999999999998887654 46899999865422100 00122333 46999999 87332 246
Q ss_pred ceeEEEEeCCCcc---------cHHHHHHHHhccCCCeEEEEe
Q 029803 96 SFDYAFVDADKDN---------YCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 96 ~~D~i~~d~~~~~---------~~~~~~~~~~~L~~gG~lv~~ 129 (187)
++|.|+||-.+.. ....++.+.+.|++ |-+++.
T Consensus 144 ~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~K 185 (267)
T 3p8z_A 144 KCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIK 185 (267)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEE
T ss_pred cccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEE
Confidence 8999999954322 12356666788988 677763
No 296
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.93 E-value=2.4e-05 Score=61.84 Aligned_cols=59 Identities=7% Similarity=0.046 Sum_probs=49.7
Q ss_pred CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029803 20 AKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 83 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 83 (187)
...|||||+|.|..|..++.... ..+|+++|+++..+...++.+ . .++++++++|+.++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~-~---~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKF-E---GSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHT-T---TSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhc-c---CCCEEEEECCccch
Confidence 47899999999999999998533 468999999999998888776 2 35799999999764
No 297
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.89 E-value=0.00015 Score=56.03 Aligned_cols=106 Identities=14% Similarity=0.176 Sum_probs=66.5
Q ss_pred cCCCEEEEEcccccHHHHHHHhh---CCCCCE--EEEEeCCc--------c-hHHHHHHHHHhcCC--CC--cEEEEEcc
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALT---IPEDGQ--ITAIDVNR--------E-TYEIGLPIIKKAGV--DH--KINFIESE 79 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~---~~~~~~--v~~iD~~~--------~-~~~~a~~~~~~~~~--~~--~~~~~~~d 79 (187)
.+.-+|+|+|-|+|.+.+..... ..+..+ ++++|..+ + ..+..+........ .. ..+++.+|
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GD 174 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGD 174 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESC
T ss_pred CCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEech
Confidence 34468999999999876543321 122444 56666432 1 12222222222210 12 34678999
Q ss_pred hHHHHHHHhhcccCCCceeEEEEeCC-C----cc-cHHHHHHHHhccCCCeEEEE
Q 029803 80 ALSVLDQLLKYSENEGSFDYAFVDAD-K----DN-YCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~D~i~~d~~-~----~~-~~~~~~~~~~~L~~gG~lv~ 128 (187)
+.+.++.+ ...++|++|.|+- + +. ..++++.+.++++|||+++-
T Consensus 175 a~~~l~~l-----~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laT 224 (308)
T 3vyw_A 175 ARKRIKEV-----ENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVS 224 (308)
T ss_dssp HHHHGGGC-----CSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHhhh-----cccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEE
Confidence 99988775 2347999999972 1 11 25789999999999999975
No 298
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.86 E-value=1.2e-05 Score=60.20 Aligned_cols=96 Identities=13% Similarity=0.044 Sum_probs=60.3
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCC--C-CCEEEEEeC--CcchHHHHHHHHHhcCCCCcEEEEEc-chHHHHHHHhhc
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIP--E-DGQITAIDV--NRETYEIGLPIIKKAGVDHKINFIES-EALSVLDQLLKY 90 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~--~-~~~v~~iD~--~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~ 90 (187)
..+..+|||+||+.|.|+.+++...+ . .+.++++|+ .|-... ..+. +.+++.++ |..+.
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~-------~~Gv-~~i~~~~G~Df~~~------- 135 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQ-------SYGW-NIVTMKSGVDVFYK------- 135 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCC-------STTG-GGEEEECSCCGGGS-------
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCccc-------CCCc-eEEEeeccCCccCC-------
Confidence 45677999999999999999988522 1 234555552 111000 0111 23566667 88762
Q ss_pred ccCCCceeEEEEeCCCcc---------cHHHHHHHHhccCCCe-EEEEe
Q 029803 91 SENEGSFDYAFVDADKDN---------YCNYHERLMKLLKVGG-IAVYD 129 (187)
Q Consensus 91 ~~~~~~~D~i~~d~~~~~---------~~~~~~~~~~~L~~gG-~lv~~ 129 (187)
...++|+|++|..+.. ....++.+.+.|+||| .+++.
T Consensus 136 --~~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvK 182 (269)
T 2px2_A 136 --PSEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIK 182 (269)
T ss_dssp --CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred --CCCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEE
Confidence 2458999999964421 1124566678999999 88874
No 299
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.85 E-value=1.4e-05 Score=61.13 Aligned_cols=101 Identities=12% Similarity=0.104 Sum_probs=62.1
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEc-chHHHHHHHhhcccCCC
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES-EALSVLDQLLKYSENEG 95 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~ 95 (187)
..+.++|||+||+.|.|+..+++..+ ...|+++|+.......... +...+ .+.+.+..+ |... + ..+
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~g-v~sV~Gvdlg~~~~~~P~~-~~~~~-~~iv~~~~~~di~~----l-----~~~ 146 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKE-VMSVKGYTLGIEGHEKPIH-MQTLG-WNIVKFKDKSNVFT----M-----PTE 146 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCC-CCBTT-GGGEEEECSCCTTT----S-----CCC
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcC-CceeeeEEecccccccccc-ccccC-CceEEeecCceeee----c-----CCC
Confidence 34667999999999999999997543 4578899986532110000 00001 122333322 2211 1 247
Q ss_pred ceeEEEEeCCCcc---------cHHHHHHHHhccCCC-eEEEEe
Q 029803 96 SFDYAFVDADKDN---------YCNYHERLMKLLKVG-GIAVYD 129 (187)
Q Consensus 96 ~~D~i~~d~~~~~---------~~~~~~~~~~~L~~g-G~lv~~ 129 (187)
++|+|++|..+.. ....++.+.+.|+|| |.+|+.
T Consensus 147 ~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 147 PSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp CCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred CcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 8999999975431 023466667899999 999986
No 300
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.72 E-value=0.00021 Score=54.61 Aligned_cols=101 Identities=13% Similarity=0.076 Sum_probs=65.0
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEc-chHHHHHHHhhcccCCC
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES-EALSVLDQLLKYSENEG 95 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~ 95 (187)
..+...|||+||+.|.++.+++.... ..+|+++|+...--+.= ..+++.+. +.+.++.+ |+... ...
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~g-v~~V~avdvG~~~he~P-~~~~ql~w-~lV~~~~~~Dv~~l---------~~~ 159 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQKR-VQEVRGYTKGGPGHEEP-QLVQSYGW-NIVTMKSGVDVFYR---------PSE 159 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCTT-EEEEEEECCCSTTSCCC-CCCCBTTG-GGEEEECSCCTTSS---------CCC
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhcC-CCEEEEEEcCCCCccCc-chhhhcCC-cceEEEeccCHhhC---------CCC
Confidence 44667999999999999998887654 45799999865411100 00011221 34778877 76332 136
Q ss_pred ceeEEEEeCCCcc---------cHHHHHHHHhccCCC-eEEEEe
Q 029803 96 SFDYAFVDADKDN---------YCNYHERLMKLLKVG-GIAVYD 129 (187)
Q Consensus 96 ~~D~i~~d~~~~~---------~~~~~~~~~~~L~~g-G~lv~~ 129 (187)
++|+|+||-.... ....++.+.+.|++| |-+++.
T Consensus 160 ~~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~K 203 (321)
T 3lkz_A 160 CCDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVK 203 (321)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCCEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEE
Confidence 7999999964221 123556666888888 888873
No 301
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.60 E-value=0.00017 Score=54.57 Aligned_cols=57 Identities=11% Similarity=0.130 Sum_probs=45.7
Q ss_pred HHHHHHHHH--cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcC
Q 029803 9 QLMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG 68 (187)
Q Consensus 9 ~ll~~l~~~--~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~ 68 (187)
+|+..++.. .++..|||.+||+|.++...... +.+++++|+++..++.++++++..+
T Consensus 200 ~l~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~---gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 200 DLIERIIRASSNPNDLVLDCFMGSGTTAIVAKKL---GRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp HHHHHHHHHHCCTTCEEEESSCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 455555553 46789999999999999887764 5799999999999999999987654
No 302
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.55 E-value=0.0001 Score=58.84 Aligned_cols=78 Identities=18% Similarity=0.035 Sum_probs=46.2
Q ss_pred CCEEEEEcccccHHHHHHHhh-------------C---CCCCEEEEEeCC-----------cchHHHHHHHHHhcCCCCc
Q 029803 20 AKKTIEIGVFTGYSLLLTALT-------------I---PEDGQITAIDVN-----------RETYEIGLPIIKKAGVDHK 72 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~la~~-------------~---~~~~~v~~iD~~-----------~~~~~~a~~~~~~~~~~~~ 72 (187)
+.+|+|+||++|..++.+... . ++..+|+.-|+- |...+..++ ..+....
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~---~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEK---ENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHH---HTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhh---hccCCCC
Confidence 568999999999999987765 1 235678888875 222222211 1222112
Q ss_pred EEEEEcchHHHHHHHhhcccCCCceeEEEEeC
Q 029803 73 INFIESEALSVLDQLLKYSENEGSFDYAFVDA 104 (187)
Q Consensus 73 ~~~~~~d~~~~~~~~~~~~~~~~~~D~i~~d~ 104 (187)
..++.+....+..++ ...+++|+|+...
T Consensus 130 ~~f~~gvpgSFy~rl----fp~~S~d~v~Ss~ 157 (384)
T 2efj_A 130 SCLIGAMPGSFYSRL----FPEESMHFLHSCY 157 (384)
T ss_dssp SEEEEECCSCTTSCC----SCTTCEEEEEEES
T ss_pred ceEEEecchhhhhcc----CCCCceEEEEecc
Confidence 345555554443333 2358999999873
No 303
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.53 E-value=0.00031 Score=56.63 Aligned_cols=49 Identities=16% Similarity=0.196 Sum_probs=43.2
Q ss_pred cCCCEEEEEcccccHHHHHHH-hhCCCCCEEEEEeCCcchHHHHHHHHHh
Q 029803 18 VNAKKTIEIGVFTGYSLLLTA-LTIPEDGQITAIDVNRETYEIGLPIIKK 66 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la-~~~~~~~~v~~iD~~~~~~~~a~~~~~~ 66 (187)
.++..++|||++.|..++.++ ...++.++|+++|++|...+..+++++.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 577899999999999999988 4554348999999999999999999987
No 304
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.47 E-value=0.00079 Score=57.54 Aligned_cols=108 Identities=16% Similarity=0.115 Sum_probs=71.1
Q ss_pred CCEEEEEcccccHHHHHHHhhC-------C----CCCEEEEEeC---CcchHH-----------HHHHHHHhcCC-----
Q 029803 20 AKKTIEIGVFTGYSLLLTALTI-------P----EDGQITAIDV---NRETYE-----------IGLPIIKKAGV----- 69 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~la~~~-------~----~~~~v~~iD~---~~~~~~-----------~a~~~~~~~~~----- 69 (187)
.-+|+|+|-|+|.+.+...... | ...+++++|. +++.+. .+++.++.+..
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 3589999999999877766543 1 1246899998 444333 22233333321
Q ss_pred --------CCcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCC-----cc-cHHHHHHHHhccCCCeEEEEe
Q 029803 70 --------DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-----DN-YCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 70 --------~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~-----~~-~~~~~~~~~~~L~~gG~lv~~ 129 (187)
.-.++++.+|+.+.++++... ....||.+|+|+-. +. ...+++.+.++++|||.+...
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~--~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~ 218 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDS--LNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATF 218 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGG--GTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEES
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccc--cCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 023568889999988765210 13679999999732 21 357899999999999998763
No 305
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.45 E-value=1.6e-05 Score=62.98 Aligned_cols=107 Identities=12% Similarity=0.078 Sum_probs=68.5
Q ss_pred CCEEEEEcccccHHHHHHHhh---------------CCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029803 20 AKKTIEIGVFTGYSLLLTALT---------------IPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 84 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~la~~---------------~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 84 (187)
+-+|+|+||++|..++.+... -++..+|+.-|+.......+-+.+.......+..++.+....+.
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 357999999999988876654 23467899999887777766665543211112344444443333
Q ss_pred HHHhhcccCCCceeEEEEeC---CCc---------------------------------ccHHHHHHHHhccCCCeEEEE
Q 029803 85 DQLLKYSENEGSFDYAFVDA---DKD---------------------------------NYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~i~~d~---~~~---------------------------------~~~~~~~~~~~~L~~gG~lv~ 128 (187)
.++ ...+++|+|+... |.. +...+++.-.+.|+|||.+++
T Consensus 132 ~rl----fp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl 207 (359)
T 1m6e_X 132 GRL----FPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVL 207 (359)
T ss_dssp SCC----SCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEE
T ss_pred hcc----CCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEE
Confidence 333 2358999999763 100 112357777899999999998
Q ss_pred eC
Q 029803 129 DN 130 (187)
Q Consensus 129 ~~ 130 (187)
.-
T Consensus 208 ~~ 209 (359)
T 1m6e_X 208 TI 209 (359)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 306
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.43 E-value=9.8e-05 Score=58.77 Aligned_cols=39 Identities=10% Similarity=0.162 Sum_probs=27.6
Q ss_pred CCEEEEEcccccHHHHHHHhh--------C------CCCCEEEEEeCCcchHH
Q 029803 20 AKKTIEIGVFTGYSLLLTALT--------I------PEDGQITAIDVNRETYE 58 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~la~~--------~------~~~~~v~~iD~~~~~~~ 58 (187)
+.+|+|+||++|..++.+... . ++..+|..-|+-.....
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn 105 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFN 105 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHH
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchH
Confidence 468999999999999887321 1 23677888887555443
No 307
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=97.37 E-value=0.00065 Score=53.80 Aligned_cols=103 Identities=18% Similarity=0.273 Sum_probs=67.4
Q ss_pred HHcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 16 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
+..++++||.+|+|. |..++.+|+... ..+|+++|.+++..+.+++. +...-+.....+..+.+..+. .
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~~~~~~~~~a~~l----Ga~~vi~~~~~~~~~~~~~~~-----~ 256 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVCG-ASIIIAVDIVESRLELAKQL----GATHVINSKTQDPVAAIKEIT-----D 256 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHHHH----TCSEEEETTTSCHHHHHHHHT-----T
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHHHc----CCCEEecCCccCHHHHHHHhc-----C
Confidence 355778999999875 778888888753 23799999999888877643 432111111123333333321 2
Q ss_pred CceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCC
Q 029803 95 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 95 ~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
+.+|+||-... ....++.+++.|+++|.++.-..
T Consensus 257 gg~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 257 GGVNFALESTG---SPEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp SCEEEEEECSC---CHHHHHHHHHTEEEEEEEEECCC
T ss_pred CCCcEEEECCC---CHHHHHHHHHHHhcCCEEEEeCC
Confidence 37998875432 24567888999999999987543
No 308
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=97.36 E-value=0.00038 Score=50.04 Aligned_cols=100 Identities=14% Similarity=0.060 Sum_probs=62.4
Q ss_pred HcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 17 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 17 ~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
..++++||.+|+ |.|.....++... +.+|+++|.+++..+.+++ .+....+.....+..+.+.... ..
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~----~g~~~~~d~~~~~~~~~~~~~~----~~ 105 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREMLSR----LGVEYVGDSRSVDFADEILELT----DG 105 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHT----TCCSEEEETTCSTHHHHHHHHT----TT
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCCCEEeeCCcHHHHHHHHHHh----CC
Confidence 456789999994 5677777777653 5799999998877665543 3432111111122223232221 12
Q ss_pred CceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 95 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 95 ~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
..+|+++.... ...++.+++.|+++|.++.-.
T Consensus 106 ~~~D~vi~~~g----~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 106 YGVDVVLNSLA----GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp CCEEEEEECCC----THHHHHHHHTEEEEEEEEECS
T ss_pred CCCeEEEECCc----hHHHHHHHHHhccCCEEEEEc
Confidence 46999886543 256788899999999998743
No 309
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=97.34 E-value=0.001 Score=51.99 Aligned_cols=101 Identities=13% Similarity=0.169 Sum_probs=68.5
Q ss_pred HHcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 16 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
+..++++||-+|+|. |..++.+++.. +.+|+++|.+++..+.+++ .+...-+.....+..+.+... .
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~------~ 230 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAM--GLRVAAVDIDDAKLNLARR----LGAEVAVNARDTDPAAWLQKE------I 230 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----TTCSEEEETTTSCHHHHHHHH------H
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHH----cCCCEEEeCCCcCHHHHHHHh------C
Confidence 456778999999874 88999999886 5699999999988877654 343221111112333333321 2
Q ss_pred CceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCC
Q 029803 95 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 95 ~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
+.+|.+|.... ....++.+++.|+++|.++.-..
T Consensus 231 g~~d~vid~~g---~~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 231 GGAHGVLVTAV---SPKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp SSEEEEEESSC---CHHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCEEEEeCC---CHHHHHHHHHHhccCCEEEEeCC
Confidence 47998876532 34577888999999999987543
No 310
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=97.25 E-value=0.0011 Score=52.97 Aligned_cols=106 Identities=16% Similarity=0.140 Sum_probs=67.9
Q ss_pred HHHcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcch-HHHHHHHhhccc
Q 029803 15 LRLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA-LSVLDQLLKYSE 92 (187)
Q Consensus 15 ~~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~ 92 (187)
.+..++++||.+|+|. |..++.+|+... ..+|+++|.+++.++.+++ .+. ..+.....+. .+.+..+.
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa-~~i~~~~~~~~~~~~~~~~---- 250 (398)
T 2dph_A 181 AGVKPGSHVYIAGAGPVGRCAAAGARLLG-AACVIVGDQNPERLKLLSD----AGF-ETIDLRNSAPLRDQIDQIL---- 250 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHHT----TTC-EEEETTSSSCHHHHHHHHH----
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHH----cCC-cEEcCCCcchHHHHHHHHh----
Confidence 3456788999999875 788888888753 2399999999988776653 343 1111111232 33333332
Q ss_pred CCCceeEEEEeCCCcc-----------cHHHHHHHHhccCCCeEEEEeC
Q 029803 93 NEGSFDYAFVDADKDN-----------YCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 93 ~~~~~D~i~~d~~~~~-----------~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
....+|+||-...... ....++.+++.|+++|.+++-.
T Consensus 251 ~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 251 GKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp SSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred CCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 1237998875433221 1346788899999999998644
No 311
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.23 E-value=0.0008 Score=51.51 Aligned_cols=88 Identities=15% Similarity=0.197 Sum_probs=58.6
Q ss_pred CCCEEEEEcc------cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhccc
Q 029803 19 NAKKTIEIGV------FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSE 92 (187)
Q Consensus 19 ~~~~vLeiG~------g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 92 (187)
.+.+|||+|+ ..|.+ .+.+..|.++.|+++|+.+-.. ..+ .++++|..+..
T Consensus 109 ~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s-----------da~--~~IqGD~~~~~-------- 165 (344)
T 3r24_A 109 YNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS-----------DAD--STLIGDCATVH-------- 165 (344)
T ss_dssp TTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC-----------SSS--EEEESCGGGEE--------
T ss_pred CCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc-----------CCC--eEEEccccccc--------
Confidence 5679999996 56663 3344455346999999976421 112 44999964421
Q ss_pred CCCceeEEEEeCCCc--------c------cHHHHHHHHhccCCCeEEEEe
Q 029803 93 NEGSFDYAFVDADKD--------N------YCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 93 ~~~~~D~i~~d~~~~--------~------~~~~~~~~~~~L~~gG~lv~~ 129 (187)
...+||+|++|-.+. . ....++-+.+.|+|||.+++.
T Consensus 166 ~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVK 216 (344)
T 3r24_A 166 TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK 216 (344)
T ss_dssp ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEE
Confidence 147899999994221 1 234566677899999999996
No 312
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=97.23 E-value=0.0018 Score=50.84 Aligned_cols=105 Identities=16% Similarity=0.212 Sum_probs=68.1
Q ss_pred HHHcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029803 15 LRLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 93 (187)
Q Consensus 15 ~~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 93 (187)
.+..++++||-+|+|. |..++.+|+... ..+|+++|.+++.++.+++. +...-+.....+..+.+..+. .
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~~l----Ga~~vi~~~~~~~~~~v~~~t----~ 232 (352)
T 3fpc_A 162 ANIKLGDTVCVIGIGPVGLMSVAGANHLG-AGRIFAVGSRKHCCDIALEY----GATDIINYKNGDIVEQILKAT----D 232 (352)
T ss_dssp TTCCTTCCEEEECCSHHHHHHHHHHHTTT-CSSEEEECCCHHHHHHHHHH----TCCEEECGGGSCHHHHHHHHT----T
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEECCCHHHHHHHHHh----CCceEEcCCCcCHHHHHHHHc----C
Confidence 4456788999999874 778888888753 23899999998888777653 432111111233333333331 2
Q ss_pred CCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCC
Q 029803 94 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 94 ~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
...+|+||-.... ...++.+++.|+++|.++.-..
T Consensus 233 g~g~D~v~d~~g~---~~~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 233 GKGVDKVVIAGGD---VHTFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp TCCEEEEEECSSC---TTHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCCEEEECCCC---hHHHHHHHHHHhcCCEEEEecc
Confidence 3479988753322 2467788899999999987543
No 313
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=97.22 E-value=0.003 Score=49.68 Aligned_cols=103 Identities=13% Similarity=0.062 Sum_probs=67.3
Q ss_pred HHHcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcc---hHHHHHHHhhc
Q 029803 15 LRLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESE---ALSVLDQLLKY 90 (187)
Q Consensus 15 ~~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d---~~~~~~~~~~~ 90 (187)
.+..++++||-+|+|. |..++.+|+... ..+|+++|.+++..+.+++ .+.. .++..+ ..+....+...
T Consensus 167 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~~i~~~ 238 (356)
T 1pl8_A 167 GGVTLGHKVLVCGAGPIGMVTLLVAKAMG-AAQVVVTDLSATRLSKAKE----IGAD---LVLQISKESPQEIARKVEGQ 238 (356)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHH----TTCS---EEEECSSCCHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----hCCC---EEEcCcccccchHHHHHHHH
Confidence 3456788999999874 788888888763 2389999999887777653 3432 223222 22333332211
Q ss_pred ccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 91 SENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 91 ~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
. ...+|+||-... ....++.+++.|+++|.++.-.
T Consensus 239 -~-~~g~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 239 -L-GCKPEVTIECTG---AEASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp -H-TSCCSEEEECSC---CHHHHHHHHHHSCTTCEEEECS
T ss_pred -h-CCCCCEEEECCC---ChHHHHHHHHHhcCCCEEEEEe
Confidence 0 257998875432 2346778889999999998744
No 314
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=97.19 E-value=0.015 Score=40.22 Aligned_cols=113 Identities=12% Similarity=0.125 Sum_probs=73.9
Q ss_pred HHHHHHHHHcC--CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHH
Q 029803 9 QLMAMLLRLVN--AKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 86 (187)
Q Consensus 9 ~ll~~l~~~~~--~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 86 (187)
..|...+.... +.-|||+|-|.|.+=-.+...+| +.+|+.+|-.-..-. ...++.-.++.||+.+.++.
T Consensus 28 ~~L~~a~~~v~~~~GpVlElGLGNGRTydHLRe~~P-~R~I~vfDR~~~~hp--------~~~P~~e~~ilGdi~~tL~~ 98 (174)
T 3iht_A 28 ACLEHAIAQTAGLSGPVYELGLGNGRTYHHLRQHVQ-GREIYVFERAVASHP--------DSTPPEAQLILGDIRETLPA 98 (174)
T ss_dssp HHHHHHHHHTTTCCSCEEEECCTTCHHHHHHHHHCC-SSCEEEEESSCCCCG--------GGCCCGGGEEESCHHHHHHH
T ss_pred HHHHHHHHHhcCCCCceEEecCCCChhHHHHHHhCC-CCcEEEEEeeeccCC--------CCCCchHheecccHHHHHHH
Confidence 34444444333 34699999999999999999998 899999996422110 11234467999999998876
Q ss_pred HhhcccCCCceeEEEEeCCCccc---HHH----HHHHHhccCCCeEEEEeCCC
Q 029803 87 LLKYSENEGSFDYAFVDADKDNY---CNY----HERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 87 ~~~~~~~~~~~D~i~~d~~~~~~---~~~----~~~~~~~L~~gG~lv~~~~~ 132 (187)
.... -+.+.-++..|....+. ..+ -..+.++|.|||+++...-+
T Consensus 99 ~~~r--~g~~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~pl 149 (174)
T 3iht_A 99 TLER--FGATASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSSDRM 149 (174)
T ss_dssp HHHH--HCSCEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESSCC
T ss_pred HHHh--cCCceEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCCcc
Confidence 3210 04567777777432221 111 22234799999999987665
No 315
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=97.11 E-value=0.0079 Score=46.91 Aligned_cols=104 Identities=16% Similarity=0.098 Sum_probs=69.0
Q ss_pred HHcCCCEEEEEccccc-HHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 16 RLVNAKKTIEIGVFTG-YSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G-~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
...++++||-+|+|.+ ..+..+++... +.+|+++|.+++.++.+++ .+...-+.....|..+.+..+. ..
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~~~~----~Ga~~~i~~~~~~~~~~v~~~t----~g 230 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKLNLAKK----IGADVTINSGDVNPVDEIKKIT----GG 230 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHHHHHHH----TTCSEEEEC-CCCHHHHHHHHT----TS
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHhhhhhh----cCCeEEEeCCCCCHHHHhhhhc----CC
Confidence 4567789999998754 46666666554 6899999999987766554 3443323334445555444442 23
Q ss_pred CceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCC
Q 029803 95 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 95 ~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
..+|.++.+. .....+..+++.++++|.+++-..
T Consensus 231 ~g~d~~~~~~---~~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 231 LGVQSAIVCA---VARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp SCEEEEEECC---SCHHHHHHHHHTEEEEEEEEECCC
T ss_pred CCceEEEEec---cCcchhheeheeecCCceEEEEec
Confidence 4688887764 234567888899999999987543
No 316
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=97.09 E-value=0.0062 Score=47.50 Aligned_cols=106 Identities=20% Similarity=0.127 Sum_probs=69.5
Q ss_pred HHHcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029803 15 LRLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 93 (187)
Q Consensus 15 ~~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 93 (187)
....++++||-+|+|. |..++.+|+... ...++++|.+++.++.+++ +|...-+.....+..+....+..
T Consensus 156 ~~~~~g~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~~~~k~~~a~~----lGa~~~i~~~~~~~~~~~~~~~~---- 226 (346)
T 4a2c_A 156 AQGCENKNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDISSEKLALAKS----FGAMQTFNSSEMSAPQMQSVLRE---- 226 (346)
T ss_dssp TTCCTTSEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHH----TTCSEEEETTTSCHHHHHHHHGG----
T ss_pred hccCCCCEEEEECCCCcchHHHHHHHHcC-CcEEEEEechHHHHHHHHH----cCCeEEEeCCCCCHHHHHHhhcc----
Confidence 3456788999999864 567777888765 4578899999988777664 45432222222344444444321
Q ss_pred CCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 94 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 94 ~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
...+|+|+-.. .....++.++++++++|.+++-...
T Consensus 227 ~~g~d~v~d~~---G~~~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 227 LRFNQLILETA---GVPQTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp GCSSEEEEECS---CSHHHHHHHHHHCCTTCEEEECCCC
T ss_pred cCCcccccccc---cccchhhhhhheecCCeEEEEEecc
Confidence 35688777543 2345778889999999999985544
No 317
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=97.09 E-value=0.0029 Score=49.50 Aligned_cols=103 Identities=14% Similarity=0.112 Sum_probs=69.3
Q ss_pred HHcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 16 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
...++++||-+|+|. |..++.+|+... ..+|+++|.+++..+.+++ .|... +--...+..+.+..+. ..
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~~~~~----lGa~~-~i~~~~~~~~~v~~~t----~g 237 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLALARE----VGADA-AVKSGAGAADAIRELT----GG 237 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHHHHHH----TTCSE-EEECSTTHHHHHHHHH----GG
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHH----cCCCE-EEcCCCcHHHHHHHHh----CC
Confidence 456788999999864 778888888764 5799999999988887764 35332 1111223333333332 12
Q ss_pred CceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCC
Q 029803 95 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 95 ~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
..+|+||-.. .....++.+++.|+++|.++.-..
T Consensus 238 ~g~d~v~d~~---G~~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 238 QGATAVFDFV---GAQSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp GCEEEEEESS---CCHHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCeEEEECC---CCHHHHHHHHHHHhcCCEEEEECC
Confidence 4799887543 234477888999999999988543
No 318
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=97.06 E-value=0.0021 Score=50.88 Aligned_cols=108 Identities=12% Similarity=0.089 Sum_probs=69.1
Q ss_pred HHHHcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhccc
Q 029803 14 LLRLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSE 92 (187)
Q Consensus 14 l~~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 92 (187)
..+..++++||-+|+|. |..++.+|+... ..+|+++|.+++..+.+++ .|...-+.....+..+.+......
T Consensus 177 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~i~~~~~~-- 249 (370)
T 4ej6_A 177 LSGIKAGSTVAILGGGVIGLLTVQLARLAG-ATTVILSTRQATKRRLAEE----VGATATVDPSAGDVVEAIAGPVGL-- 249 (370)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHHH----HTCSEEECTTSSCHHHHHHSTTSS--
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----cCCCEEECCCCcCHHHHHHhhhhc--
Confidence 34566788999999864 778888888764 3489999999988877765 343321111122333333320000
Q ss_pred CCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCC
Q 029803 93 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 93 ~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
..+.+|+||-.. .....++.+++.|+++|.+++-..
T Consensus 250 ~~gg~Dvvid~~---G~~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 250 VPGGVDVVIECA---GVAETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp STTCEEEEEECS---CCHHHHHHHHHHEEEEEEEEECSC
T ss_pred cCCCCCEEEECC---CCHHHHHHHHHHhccCCEEEEEec
Confidence 124799887532 234577888999999999988543
No 319
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=97.02 E-value=0.0087 Score=46.90 Aligned_cols=106 Identities=11% Similarity=0.063 Sum_probs=66.4
Q ss_pred HHHcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEE-cchHHHHHHHhhccc
Q 029803 15 LRLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE-SEALSVLDQLLKYSE 92 (187)
Q Consensus 15 ~~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~ 92 (187)
.+..++++||-+|+|. |..++.+|+.. +.+|+++|.+++..+.+++ .+...-+.... .+..+.+...... .
T Consensus 164 ~~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~~~~~i~~~~~~-~ 236 (352)
T 1e3j_A 164 AGVQLGTTVLVIGAGPIGLVSVLAAKAY--GAFVVCTARSPRRLEVAKN----CGADVTLVVDPAKEEESSIIERIRS-A 236 (352)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----TTCSEEEECCTTTSCHHHHHHHHHH-H
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHH----hCCCEEEcCcccccHHHHHHHHhcc-c
Confidence 3456788999999864 77788888875 4679999999988877653 34331111110 2323333322110 0
Q ss_pred CCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 93 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 93 ~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
....+|+||-... ....++.+++.|+++|.++.-.
T Consensus 237 ~g~g~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 237 IGDLPNVTIDCSG---NEKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp SSSCCSEEEECSC---CHHHHHHHHHHSCTTCEEEECS
T ss_pred cCCCCCEEEECCC---CHHHHHHHHHHHhcCCEEEEEe
Confidence 0247998875432 2346778889999999998743
No 320
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.01 E-value=0.026 Score=43.64 Aligned_cols=111 Identities=8% Similarity=0.006 Sum_probs=72.4
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCC--CCcEEEEEcchHH-HHHHHhhcccCCC
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGV--DHKINFIESEALS-VLDQLLKYSENEG 95 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~-~~~~~~~~~~~~~ 95 (187)
.+..||++|||.-.....+. .+++.+++-+| .|+.++..++.+...+. ..+..++.+|..+ +...+...+....
T Consensus 102 g~~QvV~LGaGlDTra~Rl~--~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 102 GIRQFVILASGLDSRAYRLD--WPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPS 178 (310)
T ss_dssp TCCEEEEETCTTCCHHHHSC--CCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTT
T ss_pred CCCeEEEeCCCCCchhhhcc--CCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCC
Confidence 46789999997666543333 24357999999 59999999999876442 4578889999865 3333322211112
Q ss_pred ceeEEEEeC-----CCcccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 96 SFDYAFVDA-----DKDNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 96 ~~D~i~~d~-----~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
..-++++.+ ..+....+++.+...+.||+.|+++...
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp SCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred CCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence 233444433 2234456788888888999999998654
No 321
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=96.99 E-value=0.0039 Score=49.16 Aligned_cols=101 Identities=16% Similarity=0.095 Sum_probs=66.6
Q ss_pred HHHcCCCEEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhccc
Q 029803 15 LRLVNAKKTIEIG--VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSE 92 (187)
Q Consensus 15 ~~~~~~~~vLeiG--~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 92 (187)
.+..++++||-+| .|.|..++.+++.. +.+|++++.+++.++.+++ .+...-+.....+..+.+...
T Consensus 159 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~~~~~~~~~~----- 227 (362)
T 2c0c_A 159 GGLSEGKKVLVTAAAGGTGQFAMQLSKKA--KCHVIGTCSSDEKSAFLKS----LGCDRPINYKTEPVGTVLKQE----- 227 (362)
T ss_dssp TCCCTTCEEEETTTTBTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCSEEEETTTSCHHHHHHHH-----
T ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHH----cCCcEEEecCChhHHHHHHHh-----
Confidence 3456788999999 56788888888875 5699999999887777664 343211111112333333332
Q ss_pred CCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 93 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 93 ~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
....+|+||-.... ..++.+++.|+++|.++.-.
T Consensus 228 ~~~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 228 YPEGVDVVYESVGG----AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp CTTCEEEEEECSCT----HHHHHHHHHEEEEEEEEECC
T ss_pred cCCCCCEEEECCCH----HHHHHHHHHHhcCCEEEEEe
Confidence 13579988764432 46788899999999988743
No 322
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.95 E-value=0.0063 Score=48.54 Aligned_cols=106 Identities=14% Similarity=0.103 Sum_probs=67.8
Q ss_pred HHcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcc-hHHHHHHHhhcccC
Q 029803 16 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESE-ALSVLDQLLKYSEN 93 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~~ 93 (187)
+..++++||-+|+|. |..++.+|+... ..+|+++|.+++.++.+++ .|.. .+.....+ ..+.+..+. .
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~G-a~~Vi~~~~~~~~~~~a~~----lGa~-~i~~~~~~~~~~~v~~~t----~ 251 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLLG-AAVVIVGDLNPARLAHAKA----QGFE-IADLSLDTPLHEQIAALL----G 251 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHH----TTCE-EEETTSSSCHHHHHHHHH----S
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCC-CCeEEEEcCCHHHHHHHHH----cCCc-EEccCCcchHHHHHHHHh----C
Confidence 456778999999864 788888998764 3389999999988887754 3431 11111112 233333331 1
Q ss_pred CCceeEEEEeCCCcc------------cHHHHHHHHhccCCCeEEEEeCC
Q 029803 94 EGSFDYAFVDADKDN------------YCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 94 ~~~~D~i~~d~~~~~------------~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
...+|+||-...... ....++.+++.|+++|.+++-..
T Consensus 252 g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 252 EPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp SSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 247998875432221 22467888999999999987543
No 323
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.94 E-value=0.011 Score=46.47 Aligned_cols=106 Identities=10% Similarity=0.001 Sum_probs=68.3
Q ss_pred HHHcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEE--cchHHHHHHHhhcc
Q 029803 15 LRLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE--SEALSVLDQLLKYS 91 (187)
Q Consensus 15 ~~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~ 91 (187)
.+..++++||-+|+|. |..++.+|+... ..+|+++|.+++..+.+++. . ..-+.... .+..+....+.+.
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~l-~----~~~~~~~~~~~~~~~~~~~v~~~- 247 (363)
T 3m6i_A 175 AGVRLGDPVLICGAGPIGLITMLCAKAAG-ACPLVITDIDEGRLKFAKEI-C----PEVVTHKVERLSAEESAKKIVES- 247 (363)
T ss_dssp HTCCTTCCEEEECCSHHHHHHHHHHHHTT-CCSEEEEESCHHHHHHHHHH-C----TTCEEEECCSCCHHHHHHHHHHH-
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHh-c----hhcccccccccchHHHHHHHHHH-
Confidence 4466788999999864 778888888763 23499999999998888865 2 11222221 1122222222211
Q ss_pred cCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 92 ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 92 ~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.....+|+||-... ....++.+++.|+++|.++.-.
T Consensus 248 t~g~g~Dvvid~~g---~~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 248 FGGIEPAVALECTG---VESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp TSSCCCSEEEECSC---CHHHHHHHHHHSCTTCEEEECC
T ss_pred hCCCCCCEEEECCC---ChHHHHHHHHHhcCCCEEEEEc
Confidence 12357998875432 3346788889999999998754
No 324
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.90 E-value=0.0026 Score=49.57 Aligned_cols=102 Identities=13% Similarity=0.090 Sum_probs=66.8
Q ss_pred HHHcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhccc
Q 029803 15 LRLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSE 92 (187)
Q Consensus 15 ~~~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 92 (187)
.+..++++||-+|+ |.|..+..+++.. +.+|++++.+++..+.+.+ ..+...-+.....+..+.+...
T Consensus 145 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~----- 214 (336)
T 4b7c_A 145 GQPKNGETVVISGAAGAVGSVAGQIARLK--GCRVVGIAGGAEKCRFLVE---ELGFDGAIDYKNEDLAAGLKRE----- 214 (336)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH---TTCCSEEEETTTSCHHHHHHHH-----
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---HcCCCEEEECCCHHHHHHHHHh-----
Confidence 34667889999997 5678888888775 5699999999887776632 2343211111122333333332
Q ss_pred CCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 93 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 93 ~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
..+.+|++|-... ...++.+++.|+++|.++.-.
T Consensus 215 ~~~~~d~vi~~~g----~~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 215 CPKGIDVFFDNVG----GEILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp CTTCEEEEEESSC----HHHHHHHHTTEEEEEEEEECC
T ss_pred cCCCceEEEECCC----cchHHHHHHHHhhCCEEEEEe
Confidence 1357998876433 246788899999999998743
No 325
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.90 E-value=0.012 Score=46.42 Aligned_cols=97 Identities=18% Similarity=0.195 Sum_probs=65.7
Q ss_pred HHcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 16 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
+..++.+||-+|+|. |..++.+|+.. +.+|++++.+++.++.+++ .+.. .++.....+....+ .
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~------~ 255 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAM--GAHVVAFTTSEAKREAAKA----LGAD---EVVNSRNADEMAAH------L 255 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHH----HTCS---EEEETTCHHHHHTT------T
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCc---EEeccccHHHHHHh------h
Confidence 456778999999874 77888888875 5689999999998888775 2432 22322222333332 2
Q ss_pred CceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 95 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 95 ~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
..+|+||-...... .++.+++.|+++|.++.-.
T Consensus 256 ~g~Dvvid~~g~~~---~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 256 KSFDFILNTVAAPH---NLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp TCEEEEEECCSSCC---CHHHHHTTEEEEEEEEECC
T ss_pred cCCCEEEECCCCHH---HHHHHHHHhccCCEEEEec
Confidence 57998875433222 3567789999999988743
No 326
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=96.87 E-value=0.00041 Score=67.15 Aligned_cols=112 Identities=14% Similarity=0.069 Sum_probs=58.0
Q ss_pred HHHHHHHH--cCCCEEEEEcccccHHHHHHHhhCCC----CCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029803 10 LMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPE----DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 83 (187)
Q Consensus 10 ll~~l~~~--~~~~~vLeiG~g~G~~~~~la~~~~~----~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 83 (187)
++..+.+. .+..+|||||.|+|..+..+...+.. ...++..|+++...+.++++++... ++.-.-|..+.
T Consensus 1229 ~~~~~~~~~~~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~d----i~~~~~d~~~~ 1304 (2512)
T 2vz8_A 1229 CVDTALENMASPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLH----VTQGQWDPANP 1304 (2512)
T ss_dssp HHHHHHTTSSSSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHT----EEEECCCSSCC
T ss_pred HHHHHHhcCCCCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcc----ccccccccccc
Confidence 34444443 33568999999999877776666542 2378899999999988888876532 22211111100
Q ss_pred HHHHhhcccCCCceeEEEEeCC---CcccHHHHHHHHhccCCCeEEEEeCC
Q 029803 84 LDQLLKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 84 ~~~~~~~~~~~~~~D~i~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
..+ ...+||+|+.... ..+....++++.++|+|||++++...
T Consensus 1305 -~~~-----~~~~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1305 -APG-----SLGKADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp -CC----------CCEEEEECC--------------------CCEEEEEEC
T ss_pred -ccC-----CCCceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 000 1357999997642 23455678899999999999988654
No 327
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.87 E-value=0.0018 Score=51.09 Aligned_cols=102 Identities=17% Similarity=0.114 Sum_probs=67.4
Q ss_pred HHcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEE-cchHHHHHHHhhcccC
Q 029803 16 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE-SEALSVLDQLLKYSEN 93 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~ 93 (187)
+..++++||-+|+|. |..++.+|+.. +.+|++++.+++.++.+++ .|...-+. .. .+..+.+..+. .
T Consensus 186 ~~~~g~~VlV~G~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~vi~-~~~~~~~~~v~~~~----~ 254 (363)
T 3uog_A 186 HLRAGDRVVVQGTGGVALFGLQIAKAT--GAEVIVTSSSREKLDRAFA----LGADHGIN-RLEEDWVERVYALT----G 254 (363)
T ss_dssp CCCTTCEEEEESSBHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----HTCSEEEE-TTTSCHHHHHHHHH----T
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEecCchhHHHHHH----cCCCEEEc-CCcccHHHHHHHHh----C
Confidence 355778999999774 77888888875 5699999999888877654 34332121 11 23333333332 2
Q ss_pred CCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 94 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 94 ~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
...+|+||-.... ..++.+++.|+++|.++.-...
T Consensus 255 g~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 255 DRGADHILEIAGG----AGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp TCCEEEEEEETTS----SCHHHHHHHEEEEEEEEEECCC
T ss_pred CCCceEEEECCCh----HHHHHHHHHhhcCCEEEEEecC
Confidence 3479988865442 2467788999999999875443
No 328
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.86 E-value=0.0069 Score=48.47 Aligned_cols=106 Identities=8% Similarity=0.058 Sum_probs=63.3
Q ss_pred HcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029803 17 LVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 95 (187)
Q Consensus 17 ~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 95 (187)
..++.+||-+|+|. |..++.+|+... ..+|+++|.+++..+.+++. |...-+.....+..+.+..+. ...
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~~l----Ga~~vi~~~~~~~~~~i~~~t----~g~ 281 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAG-ASKVILSEPSEVRRNLAKEL----GADHVIDPTKENFVEAVLDYT----NGL 281 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHHHH----TCSEEECTTTSCHHHHHHHHT----TTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHc----CCCEEEcCCCCCHHHHHHHHh----CCC
Confidence 45678999999763 677888888763 33999999999888877653 432111111123333333331 234
Q ss_pred ceeEEEEeCCCc--ccHHHHHHHHhccCCCeEEEEeCC
Q 029803 96 SFDYAFVDADKD--NYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 96 ~~D~i~~d~~~~--~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.+|+||-..... .....++.+++.++++|.+++-..
T Consensus 282 g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 282 GAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp CCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred CCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 799887543332 122233333355599999988543
No 329
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.86 E-value=0.0074 Score=47.71 Aligned_cols=100 Identities=16% Similarity=0.285 Sum_probs=66.1
Q ss_pred HHcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEE-----cchHHHHHHHhh
Q 029803 16 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE-----SEALSVLDQLLK 89 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~-----~d~~~~~~~~~~ 89 (187)
+..++++||-+|+|. |..++.+|+... ..+|+++|.+++.++.+++ .+.. .++. .+..+.+..+.
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~~~~~- 259 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCHSAG-AKRIIAVDLNPDKFEKAKV----FGAT---DFVNPNDHSEPISQVLSKMT- 259 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHHH----TTCC---EEECGGGCSSCHHHHHHHHH-
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHH----hCCc---eEEeccccchhHHHHHHHHh-
Confidence 345678999999763 777888888763 2389999999998887764 3432 1221 12333333331
Q ss_pred cccCCCceeEEEEeCCCcccHHHHHHHHhccCCC-eEEEEeCC
Q 029803 90 YSENEGSFDYAFVDADKDNYCNYHERLMKLLKVG-GIAVYDNT 131 (187)
Q Consensus 90 ~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~g-G~lv~~~~ 131 (187)
.+.+|+||-... ....++.++++|+++ |.++.-..
T Consensus 260 ----~~g~D~vid~~g---~~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 260 ----NGGVDFSLECVG---NVGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp ----TSCBSEEEECSC---CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred ----CCCCCEEEECCC---CHHHHHHHHHHhhcCCcEEEEEcC
Confidence 247998875432 245678889999999 99987543
No 330
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=96.83 E-value=0.002 Score=50.21 Aligned_cols=100 Identities=18% Similarity=0.137 Sum_probs=65.2
Q ss_pred HcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 17 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 17 ~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
..++++||-+|+ |.|..++.+++.. +.+|++++.+++.++.+++ .+...-+.....+..+.+.... ..
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~~~~~~~~~~~~~~~~~~~----~~ 215 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMK--GAHTIAVASTDEKLKIAKE----YGAEYLINASKEDILRQVLKFT----NG 215 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCSEEEETTTSCHHHHHHHHT----TT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCcEEEeCCCchHHHHHHHHh----CC
Confidence 457789999993 5677888888875 5799999999887776654 3432111111123333333331 23
Q ss_pred CceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 95 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 95 ~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
..+|++|-.... ..++.+++.|+++|.++.-.
T Consensus 216 ~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 216 KGVDASFDSVGK----DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp SCEEEEEECCGG----GGHHHHHHHEEEEEEEEECC
T ss_pred CCceEEEECCCh----HHHHHHHHHhccCCEEEEEc
Confidence 579988764432 45777889999999998853
No 331
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=96.83 E-value=0.0035 Score=49.02 Aligned_cols=99 Identities=12% Similarity=0.123 Sum_probs=65.6
Q ss_pred HcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 17 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 17 ~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
..++++||-+|+ |.|..++.+++.. +.+|++++.+++..+.+++. +...-+.. ..+..+.+.... ..
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~----ga~~v~~~-~~~~~~~v~~~~----~~ 225 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGM--GAKVIAVVNRTAATEFVKSV----GADIVLPL-EEGWAKAVREAT----GG 225 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHH----TCSEEEES-STTHHHHHHHHT----TT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhc----CCcEEecC-chhHHHHHHHHh----CC
Confidence 457789999996 5688888888875 56999999999988877753 43211111 133333333331 23
Q ss_pred CceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 95 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 95 ~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
..+|++|-.... ..++.+++.|+++|.++.-.
T Consensus 226 ~g~Dvvid~~g~----~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 226 AGVDMVVDPIGG----PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp SCEEEEEESCC------CHHHHHHTEEEEEEEEEC-
T ss_pred CCceEEEECCch----hHHHHHHHhhcCCCEEEEEE
Confidence 479988764433 24677889999999998753
No 332
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=96.82 E-value=0.024 Score=44.30 Aligned_cols=117 Identities=13% Similarity=0.178 Sum_probs=75.7
Q ss_pred HHHHHHHHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcC--------------------C
Q 029803 10 LMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG--------------------V 69 (187)
Q Consensus 10 ll~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~--------------------~ 69 (187)
++..++...+...|+.+|||.......+....+ +.+++-+|. |+.++.-++.+...+ .
T Consensus 88 ~v~~fl~~~~~~qVV~LGaGlDTr~~RL~~~~~-~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~ 165 (334)
T 1rjd_A 88 AILEFLVANEKVQVVNLGCGSDLRMLPLLQMFP-HLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLID 165 (334)
T ss_dssp HHHHHHHHCSSEEEEEETCTTCCTHHHHHHHCT-TEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEE
T ss_pred HHHHHHHHCCCcEEEEeCCCCccHHHHhcCcCC-CCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccC
Confidence 334444445668899999999988888876544 567777887 888888777777642 1
Q ss_pred CCcEEEEEcchHH--HHHHHhhcccCCCceeEEEEeC-----CCcccHHHHHHHHhccCCCeEEE-Ee
Q 029803 70 DHKINFIESEALS--VLDQLLKYSENEGSFDYAFVDA-----DKDNYCNYHERLMKLLKVGGIAV-YD 129 (187)
Q Consensus 70 ~~~~~~~~~d~~~--~~~~~~~~~~~~~~~D~i~~d~-----~~~~~~~~~~~~~~~L~~gG~lv-~~ 129 (187)
..+.+++.+|..+ .+..++...+......++++.+ ..+....+++.+.... |+|.++ ++
T Consensus 166 ~~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e 232 (334)
T 1rjd_A 166 QGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYD 232 (334)
T ss_dssp CSSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEE
T ss_pred CCceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEe
Confidence 3578999999875 3333222211124556666665 2344556777777776 566654 44
No 333
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.82 E-value=0.0057 Score=48.34 Aligned_cols=99 Identities=14% Similarity=0.251 Sum_probs=65.9
Q ss_pred HHcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEE-----cchHHHHHHHhh
Q 029803 16 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE-----SEALSVLDQLLK 89 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~-----~d~~~~~~~~~~ 89 (187)
+..++++||-+|+|. |..++.+|+... ..+|+++|.+++..+.+++ .+.. .++. .+..+.+..+.
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~i~~~t- 258 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAG-ASRIIGVGTHKDKFPKAIE----LGAT---ECLNPKDYDKPIYEVICEKT- 258 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHHHHT-
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHHH----cCCc---EEEecccccchHHHHHHHHh-
Confidence 455778999999763 677888888753 2389999999998887764 3432 1222 12333333331
Q ss_pred cccCCCceeEEEEeCCCcccHHHHHHHHhccCCC-eEEEEeC
Q 029803 90 YSENEGSFDYAFVDADKDNYCNYHERLMKLLKVG-GIAVYDN 130 (187)
Q Consensus 90 ~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~g-G~lv~~~ 130 (187)
.+.+|+||-... ....++.+++.|+++ |.++.-.
T Consensus 259 ----~gg~Dvvid~~g---~~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 259 ----NGGVDYAVECAG---RIETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp ----TSCBSEEEECSC---CHHHHHHHHHTBCTTTCEEEECC
T ss_pred ----CCCCCEEEECCC---CHHHHHHHHHHHhcCCCEEEEEc
Confidence 247998875432 245678889999999 9998754
No 334
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.80 E-value=0.0077 Score=47.64 Aligned_cols=102 Identities=20% Similarity=0.249 Sum_probs=65.7
Q ss_pred HcCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEE--cchHHHHHHHhhcccC
Q 029803 17 LVNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE--SEALSVLDQLLKYSEN 93 (187)
Q Consensus 17 ~~~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~~~ 93 (187)
..++++||-+|+| .|..++.+|+... ..+|+++|.+++..+.+++ .+...-+.... .+..+.+..+.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~~~v~~~~----- 262 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAG-ASRIIAIDINGEKFPKAKA----LGATDCLNPRELDKPVQDVITELT----- 262 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHHH----TTCSEEECGGGCSSCHHHHHHHHH-----
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----hCCcEEEccccccchHHHHHHHHh-----
Confidence 4567899999976 3778888888763 2389999999998887754 34321111110 12333333331
Q ss_pred CCceeEEEEeCCCcccHHHHHHHHhccCCC-eEEEEeCC
Q 029803 94 EGSFDYAFVDADKDNYCNYHERLMKLLKVG-GIAVYDNT 131 (187)
Q Consensus 94 ~~~~D~i~~d~~~~~~~~~~~~~~~~L~~g-G~lv~~~~ 131 (187)
.+.+|+||-... ....++.+++.|+++ |.++.-..
T Consensus 263 ~~g~Dvvid~~G---~~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 263 AGGVDYSLDCAG---TAQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp TSCBSEEEESSC---CHHHHHHHHHTBCTTTCEEEECCC
T ss_pred CCCccEEEECCC---CHHHHHHHHHHhhcCCCEEEEECC
Confidence 247998875332 245678889999999 99987543
No 335
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.78 E-value=0.004 Score=48.58 Aligned_cols=102 Identities=15% Similarity=0.026 Sum_probs=65.3
Q ss_pred HHcCCCEEEEEccc--ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029803 16 RLVNAKKTIEIGVF--TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 93 (187)
Q Consensus 16 ~~~~~~~vLeiG~g--~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 93 (187)
+..++++||-+|+| .|..++.+++.. +.+|++++.+++.++.+++. +...-+.....+..+.+..+. .
T Consensus 141 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~l----ga~~~~~~~~~~~~~~~~~~~----~ 210 (340)
T 3gms_A 141 NLQRNDVLLVNACGSAIGHLFAQLSQIL--NFRLIAVTRNNKHTEELLRL----GAAYVIDTSTAPLYETVMELT----N 210 (340)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHHH----TCSEEEETTTSCHHHHHHHHT----T
T ss_pred ccCCCCEEEEeCCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhC----CCcEEEeCCcccHHHHHHHHh----C
Confidence 45677899999986 677888888865 57999999999988887753 432111111123333333331 2
Q ss_pred CCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCC
Q 029803 94 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 94 ~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
...+|++|-..... ......+.|+++|.++.-..
T Consensus 211 ~~g~Dvvid~~g~~----~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 211 GIGADAAIDSIGGP----DGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp TSCEEEEEESSCHH----HHHHHHHTEEEEEEEEECCC
T ss_pred CCCCcEEEECCCCh----hHHHHHHHhcCCCEEEEEee
Confidence 35799887643222 22344589999999988543
No 336
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=96.76 E-value=0.0029 Score=49.05 Aligned_cols=100 Identities=8% Similarity=0.014 Sum_probs=65.4
Q ss_pred HcCCCEEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 17 LVNAKKTIEIG--VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 17 ~~~~~~vLeiG--~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
..++++||-+| .+.|..+..+++.. +.+|++++.+++.++.+++. +...-+.....+..+.+.... ..
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~----Ga~~~~~~~~~~~~~~~~~~~----~~ 207 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKAL--GAKLIGTVSSPEKAAHAKAL----GAWETIDYSHEDVAKRVLELT----DG 207 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHHH----TCSEEEETTTSCHHHHHHHHT----TT
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc----CCCEEEeCCCccHHHHHHHHh----CC
Confidence 45678999998 35678888888875 56999999999888877642 432111111123333333331 23
Q ss_pred CceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 95 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 95 ~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
..+|++|-.... ..++.+++.|+++|.++.-.
T Consensus 208 ~g~Dvvid~~g~----~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 208 KKCPVVYDGVGQ----DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp CCEEEEEESSCG----GGHHHHHTTEEEEEEEEECC
T ss_pred CCceEEEECCCh----HHHHHHHHHhcCCCEEEEEe
Confidence 579988764332 35678889999999998854
No 337
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=96.76 E-value=0.0033 Score=48.91 Aligned_cols=100 Identities=13% Similarity=0.159 Sum_probs=64.5
Q ss_pred HcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 17 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 17 ~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
..++++||-+|+ |.|..+..+++.. +.+|++++.+++..+.+++ .+....+.....+..+.+.... ..
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~----~g~~~~~d~~~~~~~~~i~~~~----~~ 212 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHL--GATVIGTVSTEEKAETARK----LGCHHTINYSTQDFAEVVREIT----GG 212 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHH----TT
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCCEEEECCCHHHHHHHHHHh----CC
Confidence 456789999994 6778888888765 5799999999887777754 2322111111122223333221 12
Q ss_pred CceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 95 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 95 ~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
..+|++|-.... ..++.+++.|+++|.++.-.
T Consensus 213 ~~~d~vi~~~g~----~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 213 KGVDVVYDSIGK----DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp CCEEEEEECSCT----TTHHHHHHTEEEEEEEEECC
T ss_pred CCCeEEEECCcH----HHHHHHHHhhccCCEEEEEe
Confidence 479988865433 45678889999999998743
No 338
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.76 E-value=0.0042 Score=48.28 Aligned_cols=100 Identities=11% Similarity=0.087 Sum_probs=64.2
Q ss_pred HHcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEE-cchHHHHHHHhhccc
Q 029803 16 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE-SEALSVLDQLLKYSE 92 (187)
Q Consensus 16 ~~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~ 92 (187)
+..++++||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++ .+....+.... .+..+.+....
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~----~g~~~~~d~~~~~~~~~~~~~~~---- 211 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYLKQ----IGFDAAFNYKTVNSLEEALKKAS---- 211 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCSEEEETTSCSCHHHHHHHHC----
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh----cCCcEEEecCCHHHHHHHHHHHh----
Confidence 3456789999997 6677777777764 5699999998887776632 23321111111 23333333331
Q ss_pred CCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 93 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 93 ~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.+.+|+++..... ..++.+++.|+++|.+++-.
T Consensus 212 -~~~~d~vi~~~g~----~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 212 -PDGYDCYFDNVGG----EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp -TTCEEEEEESSCH----HHHHHHHTTEEEEEEEEECC
T ss_pred -CCCCeEEEECCCh----HHHHHHHHHHhcCCEEEEEe
Confidence 2479988865432 35788889999999998743
No 339
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=96.74 E-value=0.0075 Score=47.61 Aligned_cols=100 Identities=17% Similarity=0.313 Sum_probs=65.9
Q ss_pred HHcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEE-----cchHHHHHHHhh
Q 029803 16 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE-----SEALSVLDQLLK 89 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~-----~d~~~~~~~~~~ 89 (187)
+..++++||-+|+|. |..++.+|+... ..+|+++|.+++..+.+++. +.. .++. .+..+.+..+.
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~v~~~~- 257 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVDINKDKFARAKEF----GAT---ECINPQDFSKPIQEVLIEMT- 257 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHHHH----TCS---EEECGGGCSSCHHHHHHHHT-
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHHc----CCc---eEeccccccccHHHHHHHHh-
Confidence 345678999999764 677788888753 23899999999988887643 432 1221 12333333331
Q ss_pred cccCCCceeEEEEeCCCcccHHHHHHHHhccCCC-eEEEEeCC
Q 029803 90 YSENEGSFDYAFVDADKDNYCNYHERLMKLLKVG-GIAVYDNT 131 (187)
Q Consensus 90 ~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~g-G~lv~~~~ 131 (187)
.+.+|+||-... ....++.+++.|+++ |.++.-..
T Consensus 258 ----~~g~D~vid~~g---~~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 258 ----DGGVDYSFECIG---NVKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp ----TSCBSEEEECSC---CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred ----CCCCCEEEECCC---cHHHHHHHHHhhccCCcEEEEEec
Confidence 247998875432 235678889999999 99987543
No 340
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=96.72 E-value=0.012 Score=45.98 Aligned_cols=102 Identities=15% Similarity=0.080 Sum_probs=66.1
Q ss_pred HHcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEE-EcchHHHHHHHhhccc
Q 029803 16 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFI-ESEALSVLDQLLKYSE 92 (187)
Q Consensus 16 ~~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~ 92 (187)
+..++++||.+|+ |.|..+..+++.. +.+|++++.+++..+.+++ .+....+... ..+..+.+....
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~~~~~~~~~~~~----~g~~~~~d~~~~~~~~~~~~~~~---- 235 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAM--GYRVLGIDGGEGKEELFRS----IGGEVFIDFTKEKDIVGAVLKAT---- 235 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSTTHHHHHHH----TTCCEEEETTTCSCHHHHHHHHH----
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC--CCcEEEEcCCHHHHHHHHH----cCCceEEecCccHhHHHHHHHHh----
Confidence 3457789999998 5777778888764 5699999998887766654 3432111111 123333333321
Q ss_pred CCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCC
Q 029803 93 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 93 ~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.+.+|+++.... ....++.+++.|+++|.++.-..
T Consensus 236 -~~~~D~vi~~~g---~~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 236 -DGGAHGVINVSV---SEAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp -TSCEEEEEECSS---CHHHHHHHTTSEEEEEEEEECCC
T ss_pred -CCCCCEEEECCC---cHHHHHHHHHHHhcCCEEEEEeC
Confidence 127998886543 23567888999999999987543
No 341
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.72 E-value=0.0078 Score=47.58 Aligned_cols=100 Identities=14% Similarity=0.289 Sum_probs=65.9
Q ss_pred HHcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEE-----cchHHHHHHHhh
Q 029803 16 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE-----SEALSVLDQLLK 89 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~-----~d~~~~~~~~~~ 89 (187)
+..++++||-+|+|. |..++.+|+... ..+|+++|.+++..+.+++ .+.. .++. .+..+.+..+.
T Consensus 188 ~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~~~~~- 258 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGVGLSVIMGCKAAG-AARIIGVDINKDKFAKAKE----VGAT---ECVNPQDYKKPIQEVLTEMS- 258 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHHHHT-
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----hCCc---eEecccccchhHHHHHHHHh-
Confidence 345778999999764 777888888763 2389999999998887753 3432 1221 12333333331
Q ss_pred cccCCCceeEEEEeCCCcccHHHHHHHHhccCCC-eEEEEeCC
Q 029803 90 YSENEGSFDYAFVDADKDNYCNYHERLMKLLKVG-GIAVYDNT 131 (187)
Q Consensus 90 ~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~g-G~lv~~~~ 131 (187)
.+.+|+||-... ....++.+++.|+++ |.++.-..
T Consensus 259 ----~~g~D~vid~~g---~~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 259 ----NGGVDFSFEVIG---RLDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp ----TSCBSEEEECSC---CHHHHHHHHHHBCTTTCEEEECSC
T ss_pred ----CCCCcEEEECCC---CHHHHHHHHHHhhcCCcEEEEecc
Confidence 247998875432 235678888999999 99987543
No 342
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.71 E-value=0.0049 Score=48.83 Aligned_cols=103 Identities=20% Similarity=0.284 Sum_probs=67.3
Q ss_pred HHcCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEE--EcchHHHHHHHhhccc
Q 029803 16 RLVNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFI--ESEALSVLDQLLKYSE 92 (187)
Q Consensus 16 ~~~~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~--~~d~~~~~~~~~~~~~ 92 (187)
+..++++||-+|+| .|..++.+|+... ..+|+++|.+++.++.+++ .|...-+... ..+..+.+..+.
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~~~i~~~~---- 260 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKTAG-ASRIIGIDIDSKKYETAKK----FGVNEFVNPKDHDKPIQEVIVDLT---- 260 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHHHT-CSCEEEECSCTTHHHHHHT----TTCCEEECGGGCSSCHHHHHHHHT----
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----cCCcEEEccccCchhHHHHHHHhc----
Confidence 35577899999986 4778888888753 2389999999998887653 3432211111 123333344331
Q ss_pred CCCceeEEEEeCCCcccHHHHHHHHhccCCC-eEEEEeCC
Q 029803 93 NEGSFDYAFVDADKDNYCNYHERLMKLLKVG-GIAVYDNT 131 (187)
Q Consensus 93 ~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~g-G~lv~~~~ 131 (187)
.+.+|+||-.. .....++.+++.|+++ |.+++-..
T Consensus 261 -~gg~D~vid~~---g~~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 261 -DGGVDYSFECI---GNVSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp -TSCBSEEEECS---CCHHHHHHHHHTBCTTTCEEEECSC
T ss_pred -CCCCCEEEECC---CCHHHHHHHHHHhhccCCEEEEEcc
Confidence 24899887543 2345678889999996 99987544
No 343
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.67 E-value=0.0025 Score=49.43 Aligned_cols=100 Identities=14% Similarity=0.110 Sum_probs=63.5
Q ss_pred HcCCCEEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 17 LVNAKKTIEIG--VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 17 ~~~~~~vLeiG--~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
..++++||-+| .|.|..+..+++.. +.+|++++.+++..+.+++ .+....+.....+..+.+.... ..
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~----~~ 207 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGTAQKAQSALK----AGAWQVINYREEDLVERLKEIT----GG 207 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHT----TT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCCCEEEECCCccHHHHHHHHh----CC
Confidence 45678999999 45677777777764 5699999999888777765 2322111111122223222221 12
Q ss_pred CceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 95 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 95 ~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
..+|++|-... ...++.+++.|+++|.++.-.
T Consensus 208 ~~~D~vi~~~g----~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 208 KKVRVVYDSVG----RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp CCEEEEEECSC----GGGHHHHHHTEEEEEEEEECC
T ss_pred CCceEEEECCc----hHHHHHHHHHhcCCCEEEEEe
Confidence 47998886544 345678889999999988743
No 344
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.65 E-value=0.0017 Score=51.04 Aligned_cols=75 Identities=15% Similarity=0.058 Sum_probs=54.4
Q ss_pred CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHH-HHhhcccCCCcee
Q 029803 20 AKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD-QLLKYSENEGSFD 98 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~~D 98 (187)
+.+++|+.||.|..++.+..+--.-..+.++|+++.+++..++|+.. ..++++|+.+... .+. ...+|
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~------~~~~~~Di~~~~~~~~~-----~~~~D 70 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH------TQLLAKTIEGITLEEFD-----RLSFD 70 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECSCGGGCCHHHHH-----HHCCS
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc------cccccCCHHHccHhHcC-----cCCcC
Confidence 46899999999999999887621013689999999999999988632 3467788876432 221 12699
Q ss_pred EEEEeCC
Q 029803 99 YAFVDAD 105 (187)
Q Consensus 99 ~i~~d~~ 105 (187)
+++.+..
T Consensus 71 ~l~~gpP 77 (343)
T 1g55_A 71 MILMSPP 77 (343)
T ss_dssp EEEECCC
T ss_pred EEEEcCC
Confidence 9998753
No 345
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=96.64 E-value=0.026 Score=44.03 Aligned_cols=100 Identities=16% Similarity=0.115 Sum_probs=65.6
Q ss_pred HHcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcch-HHHHHHHhhcccC
Q 029803 16 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA-LSVLDQLLKYSEN 93 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~ 93 (187)
+. ++++||-+|+|. |..++.+|+..-++.+|++++.+++..+.+++ .+.. .++..+. .+....+. .
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~----~ 235 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LGAD---YVSEMKDAESLINKLT----D 235 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTCS---EEECHHHHHHHHHHHH----T
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCCC---EEeccccchHHHHHhh----c
Confidence 45 789999999863 67788888875114689999999988887765 2432 1222111 22333332 1
Q ss_pred CCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 94 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 94 ~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
...+|+||-... ....++.+++.|+++|.++.-.
T Consensus 236 g~g~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 236 GLGASIAIDLVG---TEETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp TCCEEEEEESSC---CHHHHHHHHHHEEEEEEEEECC
T ss_pred CCCccEEEECCC---ChHHHHHHHHHhhcCCEEEEeC
Confidence 247998875432 2346788889999999998743
No 346
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=96.60 E-value=0.013 Score=45.59 Aligned_cols=100 Identities=18% Similarity=0.186 Sum_probs=65.5
Q ss_pred HHcCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 16 RLVNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 16 ~~~~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
+..++++||-+|+| .|..++.+++.. +.+|++++.+++.++.+++ .+...-+.....+..+.+... .
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~~d~~~~~~~~~~~~~------~ 228 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAM--GLNVVAVDIGDEKLELAKE----LGADLVVNPLKEDAAKFMKEK------V 228 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH----TTCSEEECTTTSCHHHHHHHH------H
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----CCCCEEecCCCccHHHHHHHH------h
Confidence 45677899999985 577888888875 5699999999988877653 343211111112222333322 1
Q ss_pred CceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 95 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 95 ~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
+.+|+||-... ....++.+++.|+++|.++.-.
T Consensus 229 ~~~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 229 GGVHAAVVTAV---SKPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp SSEEEEEESSC---CHHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCEEEECCC---CHHHHHHHHHHhhcCCEEEEec
Confidence 47998876432 2356788889999999998743
No 347
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.49 E-value=0.017 Score=45.16 Aligned_cols=93 Identities=16% Similarity=0.198 Sum_probs=64.8
Q ss_pred HHcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 16 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
+..++++||-+|+|. |..++.+|+.. +.+|++++.+++..+.+++ .|.. . ++ .+.. .+ .
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~--~-v~-~~~~----~~------~ 232 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAM--GAEVSVFARNEHKKQDALS----MGVK--H-FY-TDPK----QC------K 232 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSSTTHHHHHH----TTCS--E-EE-SSGG----GC------C
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHh----cCCC--e-ec-CCHH----HH------h
Confidence 456788999999874 78888888876 5699999999998887764 3532 2 22 3321 11 2
Q ss_pred CceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCC
Q 029803 95 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 95 ~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
..+|+||-..... ..++.+++.|+++|.++.-..
T Consensus 233 ~~~D~vid~~g~~---~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 233 EELDFIISTIPTH---YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp SCEEEEEECCCSC---CCHHHHHTTEEEEEEEEECCC
T ss_pred cCCCEEEECCCcH---HHHHHHHHHHhcCCEEEEECC
Confidence 3799887543332 246678899999999998543
No 348
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=96.48 E-value=0.011 Score=46.96 Aligned_cols=103 Identities=12% Similarity=0.111 Sum_probs=64.7
Q ss_pred HcCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcc---hHHHHHHHhhccc
Q 029803 17 LVNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESE---ALSVLDQLLKYSE 92 (187)
Q Consensus 17 ~~~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d---~~~~~~~~~~~~~ 92 (187)
..++++||-+|+| .|..++.+|+... ..+|++++.+++..+.+++ .+.. .++..+ ..+....+... .
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~v~~~-~ 263 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLG-AENVIVIAGSPNRLKLAEE----IGAD---LTLNRRETSVEERRKAIMDI-T 263 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTT-BSEEEEEESCHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHHHH-T
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcC-CceEEEEcCCHHHHHHHHH----cCCc---EEEeccccCcchHHHHHHHH-h
Confidence 4567899999965 4677888888753 2599999999988777663 3432 223322 22222222111 1
Q ss_pred CCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCC
Q 029803 93 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 93 ~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
....+|+||-.... ...++.+++.|+++|.++.-..
T Consensus 264 ~g~g~Dvvid~~g~---~~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 264 HGRGADFILEATGD---SRALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp TTSCEEEEEECSSC---TTHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCCcEEEECCCC---HHHHHHHHHHHhcCCEEEEEec
Confidence 12379988754322 2356778899999999987543
No 349
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=96.46 E-value=0.0059 Score=47.94 Aligned_cols=101 Identities=16% Similarity=0.132 Sum_probs=65.9
Q ss_pred HHcCCCEEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029803 16 RLVNAKKTIEIG--VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 93 (187)
Q Consensus 16 ~~~~~~~vLeiG--~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 93 (187)
+..++++||-+| .|.|..++.+++.. +.+|++++.+++.++.+++. +...-+.....+..+.+....
T Consensus 164 ~~~~g~~VlV~Gg~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~l----Ga~~~~~~~~~~~~~~~~~~~----- 232 (353)
T 4dup_A 164 GLTEGESVLIHGGTSGIGTTAIQLARAF--GAEVYATAGSTGKCEACERL----GAKRGINYRSEDFAAVIKAET----- 232 (353)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHH----TCSEEEETTTSCHHHHHHHHH-----
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhc----CCCEEEeCCchHHHHHHHHHh-----
Confidence 345778999995 45678888888875 57999999999888877652 432111111223333333331
Q ss_pred CCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeCC
Q 029803 94 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 94 ~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
...+|++|-.... ..++.+++.|+++|.++.-..
T Consensus 233 ~~g~Dvvid~~g~----~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 233 GQGVDIILDMIGA----AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp SSCEEEEEESCCG----GGHHHHHHTEEEEEEEEECCC
T ss_pred CCCceEEEECCCH----HHHHHHHHHhccCCEEEEEEe
Confidence 3679988765433 256778899999999987543
No 350
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=96.46 E-value=0.0037 Score=48.88 Aligned_cols=100 Identities=12% Similarity=0.144 Sum_probs=65.1
Q ss_pred HcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 17 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 17 ~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
..++++||-+|+ |.|..++.+++.. +.+|++++.+++.++.+++ .+...-+.....+..+.+.... ..
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~----~ga~~~~d~~~~~~~~~~~~~~----~~ 233 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLF--GARVIATAGSEDKLRRAKA----LGADETVNYTHPDWPKEVRRLT----GG 233 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCSEEEETTSTTHHHHHHHHT----TT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh----cCCCEEEcCCcccHHHHHHHHh----CC
Confidence 456789999997 6788888888875 5699999999888877764 2432111111112223333321 12
Q ss_pred CceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 95 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 95 ~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
..+|++|-... . ..++.+++.|+++|.++.-.
T Consensus 234 ~~~d~vi~~~g-~---~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 234 KGADKVVDHTG-A---LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp TCEEEEEESSC-S---SSHHHHHHHEEEEEEEEESS
T ss_pred CCceEEEECCC-H---HHHHHHHHhhccCCEEEEEe
Confidence 47998886554 2 24677789999999988743
No 351
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.44 E-value=0.01 Score=47.15 Aligned_cols=103 Identities=11% Similarity=0.011 Sum_probs=66.2
Q ss_pred CEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHH-HHhhcccCCCceeE
Q 029803 21 KKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD-QLLKYSENEGSFDY 99 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~~D~ 99 (187)
.+++|+.||.|..++.+..+- -..+.++|+++.+.+..+.|+. ...++++|+.+... .+.........+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG--~~~v~avE~d~~a~~t~~~N~~------~~~~~~~DI~~~~~~~~~~~~~~~~~~D~ 74 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG--FDVKMAVEIDQHAINTHAINFP------RSLHVQEDVSLLNAEIIKGFFKNDMPIDG 74 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT--CEEEEEECSCHHHHHHHHHHCT------TSEEECCCGGGCCHHHHHHHHCSCCCCCE
T ss_pred CeEEEEccCcCHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHhCC------CCceEecChhhcCHHHHHhhcccCCCeeE
Confidence 579999999999999888762 2356799999999888888752 35677888765322 11100001368999
Q ss_pred EEEeCCCccc-----------H-HH---HHHHHhccCCCeEEEEeCCC
Q 029803 100 AFVDADKDNY-----------C-NY---HERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 100 i~~d~~~~~~-----------~-~~---~~~~~~~L~~gG~lv~~~~~ 132 (187)
|+.+...+.+ . .. +-.+.+.++| -+++++|+-
T Consensus 75 i~ggpPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P-~~~v~ENV~ 121 (376)
T 3g7u_A 75 IIGGPPCQGFSSIGKGNPDDSRNQLYMHFYRLVSELQP-LFFLAENVP 121 (376)
T ss_dssp EEECCCCCTTC-------CHHHHHHHHHHHHHHHHHCC-SEEEEEECT
T ss_pred EEecCCCCCcccccCCCCCCchHHHHHHHHHHHHHhCC-CEEEEecch
Confidence 9987542211 1 11 2234466788 466676654
No 352
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=96.43 E-value=0.0063 Score=48.02 Aligned_cols=97 Identities=16% Similarity=0.084 Sum_probs=63.9
Q ss_pred CCCEEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 19 NAKKTIEIG--VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 19 ~~~~vLeiG--~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
++++||-+| .+.|..++.+|+.+. +.+|++++.+++..+.+++ .|... +--...+..+.+..+ ..+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~~~~~~~~~~~----lGad~-vi~~~~~~~~~v~~~-----~~~g 239 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPETQEWVKS----LGAHH-VIDHSKPLAAEVAAL-----GLGA 239 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECSSHHHHHHHHH----TTCSE-EECTTSCHHHHHHTT-----CSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHH----cCCCE-EEeCCCCHHHHHHHh-----cCCC
Confidence 567899998 346888888988644 6799999999888777754 35321 111112222333322 2458
Q ss_pred eeEEEEeCCCcccHHHHHHHHhccCCCeEEEEe
Q 029803 97 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 97 ~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+|+||-.. .....++.+++.|+++|.++.-
T Consensus 240 ~Dvvid~~---g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 240 PAFVFSTT---HTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEEEECS---CHHHHHHHHHHHSCTTCEEEEC
T ss_pred ceEEEECC---CchhhHHHHHHHhcCCCEEEEE
Confidence 99877532 2335678889999999999874
No 353
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=96.40 E-value=0.012 Score=46.08 Aligned_cols=99 Identities=13% Similarity=0.088 Sum_probs=63.7
Q ss_pred CCCEEEEEccc-ccHHHHHHHhhCCCCC-EEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 19 NAKKTIEIGVF-TGYSLLLTALTIPEDG-QITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 19 ~~~~vLeiG~g-~G~~~~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
++++||-+|+| .|..++.+|+.. +. +|++++.+++..+.+++. +...-+.....+..+.+..+. ....
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~~----Ga~~~~~~~~~~~~~~v~~~~----~g~g 236 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKAS--GAYPVIVSEPSDFRRELAKKV----GADYVINPFEEDVVKEVMDIT----DGNG 236 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHHHHHHH----TCSEEECTTTSCHHHHHHHHT----TTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh----CCCEEECCCCcCHHHHHHHHc----CCCC
Confidence 67899999985 367778888875 45 899999998887777642 432111111123333333321 1247
Q ss_pred eeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 97 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 97 ~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
+|+||-... ....++.+++.|+++|.++.-.
T Consensus 237 ~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 237 VDVFLEFSG---APKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp EEEEEECSC---CHHHHHHHHHHEEEEEEEEECC
T ss_pred CCEEEECCC---CHHHHHHHHHHHhcCCEEEEEc
Confidence 998875432 2456788889999999988743
No 354
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=96.39 E-value=0.014 Score=45.64 Aligned_cols=104 Identities=19% Similarity=0.145 Sum_probs=65.5
Q ss_pred HHHcCCCEEEEEccc--ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhccc
Q 029803 15 LRLVNAKKTIEIGVF--TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSE 92 (187)
Q Consensus 15 ~~~~~~~~vLeiG~g--~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 92 (187)
.+..++++||-+|+| .|..+..+++... +.+|+++|.+++..+.+++. +....+.....+..+.+..+.
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~-Ga~Vi~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~---- 236 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVS-GATIIGVDVREEAVEAAKRA----GADYVINASMQDPLAEIRRIT---- 236 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHT-CCEEEEEESSHHHHHHHHHH----TCSEEEETTTSCHHHHHHHHT----
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHHh----CCCEEecCCCccHHHHHHHHh----
Confidence 345577899999987 5667777777652 46899999999888777542 322111111112222233331
Q ss_pred CCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 93 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 93 ~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
..+.+|++|-... ....++.+++.|+++|.++.-.
T Consensus 237 ~~~~~d~vi~~~g---~~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 237 ESKGVDAVIDLNN---SEKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp TTSCEEEEEESCC---CHHHHTTGGGGEEEEEEEEECC
T ss_pred cCCCceEEEECCC---CHHHHHHHHHHHhcCCEEEEEC
Confidence 1147998886543 2346778889999999998743
No 355
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=96.38 E-value=0.02 Score=43.72 Aligned_cols=92 Identities=17% Similarity=0.169 Sum_probs=64.1
Q ss_pred HcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcch-HHHHHHHhhcccC
Q 029803 17 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA-LSVLDQLLKYSEN 93 (187)
Q Consensus 17 ~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~ 93 (187)
..++++||-+|+ |.|..++.+++.. +.+|++++.+++..+.+++ .+.. .++..+. .+....+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~---~~~~~~~~~~~~~~~------ 187 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPEKLALPLA----LGAE---EAATYAEVPERAKAW------ 187 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGGGSHHHHH----TTCS---EEEEGGGHHHHHHHT------
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh----cCCC---EEEECCcchhHHHHh------
Confidence 557789999997 5677888888875 5699999999988877754 3432 2232222 2333332
Q ss_pred CCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEe
Q 029803 94 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 94 ~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
..+|++|- ... ..++.+++.|+++|.++.-
T Consensus 188 -~~~d~vid-~g~----~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 188 -GGLDLVLE-VRG----KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp -TSEEEEEE-CSC----TTHHHHHTTEEEEEEEEEC
T ss_pred -cCceEEEE-CCH----HHHHHHHHhhccCCEEEEE
Confidence 57998887 543 3567888999999998874
No 356
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=96.37 E-value=0.0058 Score=47.69 Aligned_cols=100 Identities=12% Similarity=0.114 Sum_probs=65.1
Q ss_pred HHcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEE-cchHHHHHHHhhccc
Q 029803 16 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE-SEALSVLDQLLKYSE 92 (187)
Q Consensus 16 ~~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~ 92 (187)
+..++++||-+|+ |.|..++.+++.. +.+|++++.+++.++.+++. .+....+.... .+..+.+....
T Consensus 152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~~---~g~~~~~d~~~~~~~~~~~~~~~---- 222 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAVGQLVGQLAKMM--GCYVVGSAGSKEKVDLLKTK---FGFDDAFNYKEESDLTAALKRCF---- 222 (345)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHT---SCCSEEEETTSCSCSHHHHHHHC----
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHH---cCCceEEecCCHHHHHHHHHHHh----
Confidence 3457789999996 5777888888765 56999999998877766532 34321111111 13333343331
Q ss_pred CCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEe
Q 029803 93 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 93 ~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
...+|++|-.... ..++.+++.|+++|.++.-
T Consensus 223 -~~~~d~vi~~~g~----~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 223 -PNGIDIYFENVGG----KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp -TTCEEEEEESSCH----HHHHHHHTTEEEEEEEEEC
T ss_pred -CCCCcEEEECCCH----HHHHHHHHHHhcCCEEEEE
Confidence 2579988765422 3678889999999999874
No 357
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.33 E-value=0.0049 Score=46.40 Aligned_cols=53 Identities=15% Similarity=0.199 Sum_probs=39.9
Q ss_pred cEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCCc-----------------ccHHHHHHHHhccCCCeEEEEe
Q 029803 72 KINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-----------------NYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 72 ~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~~-----------------~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
..+++++|+.+.+..+ ..++||+||+|+... .....++.+.++|+|+|.+++.
T Consensus 4 ~~~l~~gD~~~~l~~l-----~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 4 INKIHQMNCFDFLDQV-----ENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SSSEEECCHHHHHHHS-----CTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCeEEechHHHHHHhc-----cccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 3568999999988775 246899999997421 1234567778999999998875
No 358
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=96.28 E-value=0.0082 Score=47.11 Aligned_cols=101 Identities=16% Similarity=0.131 Sum_probs=63.6
Q ss_pred HHcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029803 16 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 93 (187)
Q Consensus 16 ~~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 93 (187)
+..++++||-.|+ |.|..++.+++.. +.+|++++.+++..+.+++ .+....+.....+..+.+.... .
T Consensus 167 ~~~~g~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~~~~d~~~~~~~~~~~~~~----~ 236 (351)
T 1yb5_A 167 CVKAGESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIVLQ----NGAHEVFNHREVNYIDKIKKYV----G 236 (351)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCSEEEETTSTTHHHHHHHHH----C
T ss_pred CCCCcCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHH----cCCCEEEeCCCchHHHHHHHHc----C
Confidence 3456789999996 5677778888765 5799999999887775543 3432111111122222222221 1
Q ss_pred CCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 94 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 94 ~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
...+|++|-.... ..++.+++.|+++|.++.-.
T Consensus 237 ~~~~D~vi~~~G~----~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 237 EKGIDIIIEMLAN----VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp TTCEEEEEESCHH----HHHHHHHHHEEEEEEEEECC
T ss_pred CCCcEEEEECCCh----HHHHHHHHhccCCCEEEEEe
Confidence 2479988764321 35677889999999998743
No 359
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.19 E-value=0.0072 Score=47.02 Aligned_cols=54 Identities=19% Similarity=0.238 Sum_probs=41.1
Q ss_pred CcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCCc-----------------ccHHHHHHHHhccCCCeEEEEe
Q 029803 71 HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-----------------NYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 71 ~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~~-----------------~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
...+++++|+.+.++.+ ..++||+|++|+... .....++++.++|+|||.+++.
T Consensus 13 ~~~~ii~gD~~~~l~~l-----~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~ 83 (323)
T 1boo_A 13 SNGSMYIGDSLELLESF-----PEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVD 83 (323)
T ss_dssp SSEEEEESCHHHHGGGS-----CSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhC-----CCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEE
Confidence 45889999998876654 257899999996421 1345677888999999998874
No 360
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.16 E-value=0.0071 Score=47.06 Aligned_cols=58 Identities=9% Similarity=0.036 Sum_probs=46.4
Q ss_pred HHHHHHHH--HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCC
Q 029803 9 QLMAMLLR--LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGV 69 (187)
Q Consensus 9 ~ll~~l~~--~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~ 69 (187)
+++..++. ..++..|||-.||+|.++...... +.+.+++|+++...+.+++++...+.
T Consensus 240 ~l~~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~~---gr~~ig~e~~~~~~~~~~~r~~~~~~ 299 (323)
T 1boo_A 240 KLPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERE---SRKWISFEMKPEYVAASAFRFLDNNI 299 (323)
T ss_dssp HHHHHHHHHHCCTTCEEEETTCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHGGGSCSCS
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc---CCCEEEEeCCHHHHHHHHHHHHhccc
Confidence 45555555 346789999999999998877664 57999999999999999999876554
No 361
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=96.15 E-value=0.021 Score=44.74 Aligned_cols=101 Identities=13% Similarity=0.128 Sum_probs=63.8
Q ss_pred HHcCC--CEEEEEcc--cccHHHHHHHhhCCCCC-EEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhc
Q 029803 16 RLVNA--KKTIEIGV--FTGYSLLLTALTIPEDG-QITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKY 90 (187)
Q Consensus 16 ~~~~~--~~vLeiG~--g~G~~~~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 90 (187)
+..++ ++||-.|+ |.|..++.+++.. +. +|++++.+++..+.+++. .+....+.....+..+.+....
T Consensus 155 ~~~~g~~~~vlI~GasggiG~~~~~~a~~~--Ga~~Vi~~~~~~~~~~~~~~~---~g~~~~~d~~~~~~~~~~~~~~-- 227 (357)
T 2zb4_A 155 HITAGSNKTMVVSGAAGACGSVAGQIGHFL--GCSRVVGICGTHEKCILLTSE---LGFDAAINYKKDNVAEQLRESC-- 227 (357)
T ss_dssp CCCTTSCCEEEESSTTBHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHT---SCCSEEEETTTSCHHHHHHHHC--
T ss_pred CCCCCCccEEEEECCCcHHHHHHHHHHHHC--CCCeEEEEeCCHHHHHHHHHH---cCCceEEecCchHHHHHHHHhc--
Confidence 35567 89999996 5667777777764 56 999999988776666542 3432111111122223333321
Q ss_pred ccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 91 SENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 91 ~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.+.+|++|-... ...++.+++.|+++|.++.-.
T Consensus 228 ---~~~~d~vi~~~G----~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 228 ---PAGVDVYFDNVG----GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp ---TTCEEEEEESCC----HHHHHHHHHTEEEEEEEEECC
T ss_pred ---CCCCCEEEECCC----HHHHHHHHHHhccCcEEEEEC
Confidence 237998886543 256788899999999998743
No 362
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.15 E-value=0.011 Score=46.05 Aligned_cols=54 Identities=15% Similarity=0.214 Sum_probs=40.6
Q ss_pred CcEEEE-EcchHHHHHHHhhcccCCCceeEEEEeCCCc----------cc----HHHHHHHHhccCCCeEEEEe
Q 029803 71 HKINFI-ESEALSVLDQLLKYSENEGSFDYAFVDADKD----------NY----CNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 71 ~~~~~~-~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~~----------~~----~~~~~~~~~~L~~gG~lv~~ 129 (187)
...+++ ++|+.+.+..+ ..+++|+||+|+... .+ ...+.++.++|+|+|.+++.
T Consensus 37 ~~~~l~i~gD~l~~L~~l-----~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 37 TTRHVYDVCDCLDTLAKL-----PDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp CEEEEEEECCHHHHHHTS-----CTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccceEEECCcHHHHHHhC-----ccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 346788 99999988765 246899999997432 12 34567778999999999884
No 363
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=96.13 E-value=0.037 Score=43.40 Aligned_cols=99 Identities=7% Similarity=0.051 Sum_probs=63.4
Q ss_pred HHHcCC------CEEEEEccc-ccHHH-HHHH-hhCCCCCE-EEEEeCCcc---hHHHHHHHHHhcCCCCcEEEEEcchH
Q 029803 15 LRLVNA------KKTIEIGVF-TGYSL-LLTA-LTIPEDGQ-ITAIDVNRE---TYEIGLPIIKKAGVDHKINFIESEAL 81 (187)
Q Consensus 15 ~~~~~~------~~vLeiG~g-~G~~~-~~la-~~~~~~~~-v~~iD~~~~---~~~~a~~~~~~~~~~~~~~~~~~d~~ 81 (187)
.+..++ ++||-+|+| .|..+ +.+| +.. +.+ |++++.+++ ..+.+++ .|.. .+.....+..
T Consensus 162 ~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~--Ga~~Vi~~~~~~~~~~~~~~~~~----lGa~-~v~~~~~~~~ 234 (357)
T 2b5w_A 162 AYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDK--GYENLYCLGRRDRPDPTIDIIEE----LDAT-YVDSRQTPVE 234 (357)
T ss_dssp HHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTT--CCCEEEEEECCCSSCHHHHHHHH----TTCE-EEETTTSCGG
T ss_pred cCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHc--CCcEEEEEeCCcccHHHHHHHHH----cCCc-ccCCCccCHH
Confidence 456677 899999974 36677 7777 765 455 999999888 7777653 3432 1211111222
Q ss_pred HHHHHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 82 SVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 82 ~~~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
+ +..+ .+.+|+||-... ....++.+++.|+++|.++.-.
T Consensus 235 ~-i~~~------~gg~Dvvid~~g---~~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 235 D-VPDV------YEQMDFIYEATG---FPKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp G-HHHH------SCCEEEEEECSC---CHHHHHHHHHHEEEEEEEEECC
T ss_pred H-HHHh------CCCCCEEEECCC---ChHHHHHHHHHHhcCCEEEEEe
Confidence 3 3332 137998875332 2346788899999999998743
No 364
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=96.08 E-value=0.023 Score=44.58 Aligned_cols=100 Identities=8% Similarity=0.054 Sum_probs=63.1
Q ss_pred HcCCCEEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 17 LVNAKKTIEIG--VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 17 ~~~~~~vLeiG--~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
..++++||-+| .|.|..++.+++.. +.+|++++.+++.++.+++. +....+.....+..+.+.... ..
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~----~~ 229 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMA--GAIPLVTAGSQKKLQMAEKL----GAAAGFNYKKEDFSEATLKFT----KG 229 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHH----TCSEEEETTTSCHHHHHHHHT----TT
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHc----CCcEEEecCChHHHHHHHHHh----cC
Confidence 45678999998 45677777787764 57999999998887777432 322111111122223333221 12
Q ss_pred CceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 95 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 95 ~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
..+|++|-..... .++.+++.|+++|.++.-.
T Consensus 230 ~~~d~vi~~~G~~----~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 230 AGVNLILDCIGGS----YWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp SCEEEEEESSCGG----GHHHHHHHEEEEEEEEECC
T ss_pred CCceEEEECCCch----HHHHHHHhccCCCEEEEEe
Confidence 4799888654332 4667789999999998754
No 365
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=96.07 E-value=0.037 Score=43.18 Aligned_cols=97 Identities=14% Similarity=0.090 Sum_probs=63.9
Q ss_pred HHcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029803 16 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 93 (187)
Q Consensus 16 ~~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 93 (187)
+..++++||-+|+ +.|..++.+++.. +.+|+++ .+++.++.+++ .+... +. ...+..+.+.... .
T Consensus 147 ~~~~g~~VlV~Ga~g~iG~~~~q~a~~~--Ga~Vi~~-~~~~~~~~~~~----lGa~~-i~-~~~~~~~~~~~~~----~ 213 (343)
T 3gaz_A 147 QVQDGQTVLIQGGGGGVGHVAIQIALAR--GARVFAT-ARGSDLEYVRD----LGATP-ID-ASREPEDYAAEHT----A 213 (343)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE-ECHHHHHHHHH----HTSEE-EE-TTSCHHHHHHHHH----T
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEE-eCHHHHHHHHH----cCCCE-ec-cCCCHHHHHHHHh----c
Confidence 3457789999993 5688888888875 5699999 78877766654 34332 22 2223333333332 2
Q ss_pred CCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEe
Q 029803 94 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 94 ~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
...+|+||-.... ..++.+++.|+++|.++.-
T Consensus 214 ~~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 214 GQGFDLVYDTLGG----PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp TSCEEEEEESSCT----HHHHHHHHHEEEEEEEEES
T ss_pred CCCceEEEECCCc----HHHHHHHHHHhcCCeEEEE
Confidence 3579988754332 4678888999999999874
No 366
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.06 E-value=0.012 Score=45.94 Aligned_cols=97 Identities=10% Similarity=-0.043 Sum_probs=64.6
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 98 (187)
+..+++|+.||+|..++.+..+- -..+.++|+++.+.+..+.|+.... ++|+.+..... -..+|
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG--~~~v~~~e~d~~a~~t~~~N~~~~~--------~~Di~~~~~~~------~~~~D 73 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCG--AECVYSNEWDKYAQEVYEMNFGEKP--------EGDITQVNEKT------IPDHD 73 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTT--CEEEEEECCCHHHHHHHHHHHSCCC--------BSCGGGSCGGG------SCCCS
T ss_pred CCCcEEEECCCcCHHHHHHHHCC--CeEEEEEeCCHHHHHHHHHHcCCCC--------cCCHHHcCHhh------CCCCC
Confidence 35689999999999999887752 2457889999999999999874311 57776643221 24699
Q ss_pred EEEEeCCC---------------cc-cHHHHHHHHhccCCCeEEEEeCCC
Q 029803 99 YAFVDADK---------------DN-YCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 99 ~i~~d~~~---------------~~-~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
+++.+... .. .-..+-.+.+.++|. +++++|+-
T Consensus 74 ~l~~gpPCQ~fS~ag~~~g~~d~r~~L~~~~~r~i~~~~P~-~~~~ENV~ 122 (327)
T 2c7p_A 74 ILCAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVREKKPK-VVFMENVK 122 (327)
T ss_dssp EEEEECCCTTTCTTSCCCGGGSTTSCHHHHHHHHHHHHCCS-EEEEEEEG
T ss_pred EEEECCCCCCcchhcccCCCcchhhHHHHHHHHHHHhccCc-EEEEeCcH
Confidence 99987321 11 111223344667885 67777664
No 367
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.05 E-value=0.012 Score=45.68 Aligned_cols=57 Identities=14% Similarity=0.207 Sum_probs=43.8
Q ss_pred HHHHHHHH--HcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCc---chHHHHHHHHHhcC
Q 029803 9 QLMAMLLR--LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNR---ETYEIGLPIIKKAG 68 (187)
Q Consensus 9 ~ll~~l~~--~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~---~~~~~a~~~~~~~~ 68 (187)
+++..++. ..++..|||-.||+|.++...... +.+.+++|+++ +.++.+++++...+
T Consensus 230 ~l~~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~---~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 230 AVIERLVRALSHPGSTVLDFFAGSGVTARVAIQE---GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp HHHHHHHHHHSCTTCEEEETTCTTCHHHHHHHHH---TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHhCCCCCEEEecCCCCCHHHHHHHHc---CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 45555554 346789999999999998887765 57999999999 99999999987654
No 368
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=96.00 E-value=0.022 Score=44.72 Aligned_cols=99 Identities=20% Similarity=0.126 Sum_probs=64.2
Q ss_pred HHcCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchH-HHHHHHhhcccC
Q 029803 16 RLVNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEAL-SVLDQLLKYSEN 93 (187)
Q Consensus 16 ~~~~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~ 93 (187)
+..++++||-+|+| .|..++.+|+.. +.+|++++.+++.++.+++ .+.. .++..... +....+
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~--Ga~Vi~~~~~~~~~~~~~~----lGa~---~v~~~~~~~~~~~~~------ 240 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAM--GAETYVISRSSRKREDAMK----MGAD---HYIATLEEGDWGEKY------ 240 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHH----HTCS---EEEEGGGTSCHHHHS------
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH----cCCC---EEEcCcCchHHHHHh------
Confidence 45678899999975 477788888875 4689999999998888765 2432 22222211 223332
Q ss_pred CCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 94 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 94 ~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.+.+|+||-..... ....++.+++.|+++|.++.-.
T Consensus 241 ~~~~D~vid~~g~~-~~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 241 FDTFDLIVVCASSL-TDIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp CSCEEEEEECCSCS-TTCCTTTGGGGEEEEEEEEECC
T ss_pred hcCCCEEEECCCCC-cHHHHHHHHHHhcCCCEEEEec
Confidence 25799887643320 0123556778999999998743
No 369
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=95.98 E-value=0.034 Score=43.38 Aligned_cols=96 Identities=19% Similarity=0.127 Sum_probs=63.6
Q ss_pred CCCEEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 19 NAKKTIEIG--VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 19 ~~~~vLeiG--~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
++++||-+| .+.|..++.+++.. +.+|++++.+++.++.+++ .+... +--...+..+.+... ....
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~-vi~~~~~~~~~~~~~-----~~~g 217 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY--GLRVITTASRNETIEWTKK----MGADI-VLNHKESLLNQFKTQ-----GIEL 217 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEECCSHHHHHHHHH----HTCSE-EECTTSCHHHHHHHH-----TCCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCcE-EEECCccHHHHHHHh-----CCCC
Confidence 678999994 34677888888875 5699999999988887775 24321 111112333333333 2457
Q ss_pred eeEEEEeCCCcccHHHHHHHHhccCCCeEEEEe
Q 029803 97 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 97 ~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+|+||-.. .....++.+++.|+++|.++.-
T Consensus 218 ~Dvv~d~~---g~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 218 VDYVFCTF---NTDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp EEEEEESS---CHHHHHHHHHHHEEEEEEEEES
T ss_pred ccEEEECC---CchHHHHHHHHHhccCCEEEEE
Confidence 99887532 2345678889999999999763
No 370
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.95 E-value=0.011 Score=45.31 Aligned_cols=54 Identities=19% Similarity=0.131 Sum_probs=39.0
Q ss_pred CcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCCc---c--------------------cHHHHHHHHhccCCCeEEE
Q 029803 71 HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD---N--------------------YCNYHERLMKLLKVGGIAV 127 (187)
Q Consensus 71 ~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~~---~--------------------~~~~~~~~~~~L~~gG~lv 127 (187)
.+++++++|+.+.++.+ ..++||+|++|...- . +...++++.++|+|||.++
T Consensus 20 ~~~~i~~gD~~~~l~~l-----~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~ 94 (297)
T 2zig_A 20 GVHRLHVGDAREVLASF-----PEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLV 94 (297)
T ss_dssp -CEEEEESCHHHHHTTS-----CTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred cCCEEEECcHHHHHhhC-----CCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEE
Confidence 35789999999876654 247999999996321 1 1234567789999999987
Q ss_pred Ee
Q 029803 128 YD 129 (187)
Q Consensus 128 ~~ 129 (187)
+.
T Consensus 95 i~ 96 (297)
T 2zig_A 95 IV 96 (297)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 371
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=95.68 E-value=0.15 Score=40.13 Aligned_cols=98 Identities=10% Similarity=0.078 Sum_probs=62.8
Q ss_pred cCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029803 18 VNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 95 (187)
Q Consensus 18 ~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 95 (187)
.++++||-+|+ +.|..++.+|+.. +.+|+++. +++..+.+++ .|...-+.....+..+.+..+. .+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~--Ga~Vi~~~-~~~~~~~~~~----lGa~~vi~~~~~~~~~~v~~~t-----~g 230 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS--GYIPIATC-SPHNFDLAKS----RGAEEVFDYRAPNLAQTIRTYT-----KN 230 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHHHH----TTCSEEEETTSTTHHHHHHHHT-----TT
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe-CHHHHHHHHH----cCCcEEEECCCchHHHHHHHHc-----cC
Confidence 56789999998 3788999999876 56888874 7777766553 4533212222233333333331 24
Q ss_pred ceeEEEEeCCCcccHHHHHHHHhcc-CCCeEEEEeC
Q 029803 96 SFDYAFVDADKDNYCNYHERLMKLL-KVGGIAVYDN 130 (187)
Q Consensus 96 ~~D~i~~d~~~~~~~~~~~~~~~~L-~~gG~lv~~~ 130 (187)
.+|++|-.. .....++.+++.| +++|.++.-.
T Consensus 231 ~~d~v~d~~---g~~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 231 NLRYALDCI---TNVESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp CCCEEEESS---CSHHHHHHHHHHSCTTCEEEEESS
T ss_pred CccEEEECC---CchHHHHHHHHHhhcCCCEEEEEe
Confidence 599887533 2335677788888 6999998754
No 372
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.57 E-value=0.056 Score=36.35 Aligned_cols=93 Identities=8% Similarity=0.009 Sum_probs=57.7
Q ss_pred CEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCCce
Q 029803 21 KKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGSF 97 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~ 97 (187)
.+|+-+|+ |..+..+++.+. .+.+|+.+|.+++.++.+++ . .+.++.+|+.+ .+... .-..+
T Consensus 8 ~~viIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~----g~~~i~gd~~~~~~l~~a-----~i~~a 72 (140)
T 3fwz_A 8 NHALLVGY--GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R----GVRAVLGNAANEEIMQLA-----HLECA 72 (140)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T----TCEEEESCTTSHHHHHHT-----TGGGC
T ss_pred CCEEEECc--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c----CCCEEECCCCCHHHHHhc-----CcccC
Confidence 47888887 555555555442 25789999999988776653 2 25678888754 33332 12578
Q ss_pred eEEEEeCCCcccHHHHHHHHhccCCCeEEEE
Q 029803 98 DYAFVDADKDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 98 D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
|++++..........+-...+.+.|+..++.
T Consensus 73 d~vi~~~~~~~~n~~~~~~a~~~~~~~~iia 103 (140)
T 3fwz_A 73 KWLILTIPNGYEAGEIVASARAKNPDIEIIA 103 (140)
T ss_dssp SEEEECCSCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred CEEEEECCChHHHHHHHHHHHHHCCCCeEEE
Confidence 9988764433222223334566777777765
No 373
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=95.53 E-value=0.1 Score=41.08 Aligned_cols=95 Identities=20% Similarity=0.175 Sum_probs=60.4
Q ss_pred CCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 19 NAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 19 ~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
++++||-+|+| .|..++.+|+.. +.+|++++.+++..+.+++. .+.. .++..+..+.+... .+.+
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~---lGa~---~v~~~~~~~~~~~~------~~~~ 252 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAF--GSKVTVISTSPSKKEEALKN---FGAD---SFLVSRDQEQMQAA------AGTL 252 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGGGHHHHHHT---SCCS---EEEETTCHHHHHHT------TTCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHh---cCCc---eEEeccCHHHHHHh------hCCC
Confidence 67899999975 366777777765 56999999998877766533 3432 22222222333332 2479
Q ss_pred eEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 98 DYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 98 D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
|+||-...... .++.+++.|+++|.++.-.
T Consensus 253 D~vid~~g~~~---~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 253 DGIIDTVSAVH---PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp EEEEECCSSCC---CSHHHHHHEEEEEEEEECC
T ss_pred CEEEECCCcHH---HHHHHHHHHhcCCEEEEEc
Confidence 98886543221 2355678899999988743
No 374
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=95.41 E-value=0.025 Score=44.03 Aligned_cols=94 Identities=14% Similarity=0.107 Sum_probs=62.3
Q ss_pred CCCEEEEEccc-ccHHHHHHHhhCCCCC-EEEEEeCCcchHHHHHHHHHhcCCCCcEEEEE---cchHHHHHHHhhcccC
Q 029803 19 NAKKTIEIGVF-TGYSLLLTALTIPEDG-QITAIDVNRETYEIGLPIIKKAGVDHKINFIE---SEALSVLDQLLKYSEN 93 (187)
Q Consensus 19 ~~~~vLeiG~g-~G~~~~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~---~d~~~~~~~~~~~~~~ 93 (187)
++++||-+|+| .|..++.+|+.. +. +|++++.+++.++.+++. . . .++. .+..+.+..+.
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~l-a-----~--~v~~~~~~~~~~~~~~~~----- 228 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRAS--GAGPILVSDPNPYRLAFARPY-A-----D--RLVNPLEEDLLEVVRRVT----- 228 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHGGGTTT-C-----S--EEECTTTSCHHHHHHHHH-----
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh-H-----H--hccCcCccCHHHHHHHhc-----
Confidence 77899999975 367778888875 45 899999998877766542 1 1 1121 23333333321
Q ss_pred CCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 94 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 94 ~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
...+|+||-... ....++.+++.|+++|.++.-.
T Consensus 229 ~~g~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 229 GSGVEVLLEFSG---NEAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp SSCEEEEEECSC---CHHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCEEEECCC---CHHHHHHHHHHHhcCCEEEEEe
Confidence 257998875432 2356788889999999988743
No 375
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.32 E-value=0.051 Score=41.73 Aligned_cols=75 Identities=13% Similarity=0.070 Sum_probs=52.0
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCE-EEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHH-HhhcccCCC
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIPEDGQ-ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ-LLKYSENEG 95 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~-v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~~~ 95 (187)
.++.+++|+.||.|..++.+..+-- ... +.++|+++.+.+..+.|+. ...++.+|+.++... +.. .+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~-~~~~v~a~E~d~~a~~ty~~N~~------~~~~~~~DI~~i~~~~i~~----~~ 82 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGI-QVDRYIASEVCEDSITVGMVRHQ------GKIMYVGDVRSVTQKHIQE----WG 82 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTB-CEEEEEEECCCHHHHHHHHHHTT------TCEEEECCGGGCCHHHHHH----TC
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCC-ccceEEEEECCHHHHHHHHHhCC------CCceeCCChHHccHHHhcc----cC
Confidence 3456899999999999988876521 122 6899999998887777752 245778888764322 211 25
Q ss_pred ceeEEEEe
Q 029803 96 SFDYAFVD 103 (187)
Q Consensus 96 ~~D~i~~d 103 (187)
.+|+++..
T Consensus 83 ~~Dll~gg 90 (295)
T 2qrv_A 83 PFDLVIGG 90 (295)
T ss_dssp CCSEEEEC
T ss_pred CcCEEEec
Confidence 79999876
No 376
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=95.13 E-value=0.076 Score=41.59 Aligned_cols=97 Identities=20% Similarity=0.252 Sum_probs=61.3
Q ss_pred Hc-CCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 17 LV-NAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 17 ~~-~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
.. ++++||-+|+| .|..++.+|+.. +.+|++++.+++..+.+++ ..+... ++..+-.+.+... .
T Consensus 177 ~~~~g~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~~~~~~~~~~~~---~lGa~~---vi~~~~~~~~~~~------~ 242 (357)
T 2cf5_A 177 LKQPGLRGGILGLGGVGHMGVKIAKAM--GHHVTVISSSNKKREEALQ---DLGADD---YVIGSDQAKMSEL------A 242 (357)
T ss_dssp TTSTTCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSTTHHHHHHT---TSCCSC---EEETTCHHHHHHS------T
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHH---HcCCce---eeccccHHHHHHh------c
Confidence 44 77899999975 466777787765 4699999999887766552 234332 2222212333332 2
Q ss_pred CceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 95 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 95 ~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
+.+|+||-...... .++.+++.|+++|.++.-.
T Consensus 243 ~g~D~vid~~g~~~---~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 243 DSLDYVIDTVPVHH---ALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp TTEEEEEECCCSCC---CSHHHHTTEEEEEEEEECS
T ss_pred CCCCEEEECCCChH---HHHHHHHHhccCCEEEEeC
Confidence 47998875433221 2456678999999998743
No 377
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=95.12 E-value=0.089 Score=41.73 Aligned_cols=99 Identities=18% Similarity=0.115 Sum_probs=57.8
Q ss_pred cCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 18 VNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 18 ~~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
.++++|+-+|+| .|......+..+ +.+|+++|.+++.++.+++.+ +.. +.....+..+ +.... ..
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~--Ga~V~~~d~~~~~l~~~~~~~---g~~--~~~~~~~~~~-l~~~l------~~ 231 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGM--GATVTVLDINIDKLRQLDAEF---CGR--IHTRYSSAYE-LEGAV------KR 231 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHT---TTS--SEEEECCHHH-HHHHH------HH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhc---CCe--eEeccCCHHH-HHHHH------cC
Confidence 467899999985 344445555554 469999999988777665433 321 2222222222 22221 35
Q ss_pred eeEEEEeCCCcc--c-HHHHHHHHhccCCCeEEEEeC
Q 029803 97 FDYAFVDADKDN--Y-CNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 97 ~D~i~~d~~~~~--~-~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.|+|+.....+. . .-+.+...+.|++||+++--.
T Consensus 232 aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 232 ADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 899987432111 1 112456678999999887643
No 378
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=95.10 E-value=0.043 Score=42.40 Aligned_cols=91 Identities=9% Similarity=0.065 Sum_probs=58.2
Q ss_pred EEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEc-ch-HHHHHHHhhcccCCCce
Q 029803 22 KTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES-EA-LSVLDQLLKYSENEGSF 97 (187)
Q Consensus 22 ~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~-~~~~~~~~~~~~~~~~~ 97 (187)
+||-+|+ |.|..++.+++.. +.+|++++.+++..+.+++ .+... ++.. +. .+....+ ....+
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~----lGa~~---~i~~~~~~~~~~~~~-----~~~~~ 217 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAEHDYLRV----LGAKE---VLAREDVMAERIRPL-----DKQRW 217 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTCHHHHHH----TTCSE---EEECC---------C-----CSCCE
T ss_pred eEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHH----cCCcE---EEecCCcHHHHHHHh-----cCCcc
Confidence 8999996 6778888888876 4689999999888877754 34321 1211 11 1112221 13479
Q ss_pred eEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 98 DYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 98 D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
|++|-.... ..++.+++.++++|.++.-.
T Consensus 218 d~vid~~g~----~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 218 AAAVDPVGG----RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp EEEEECSTT----TTHHHHHHTEEEEEEEEECS
T ss_pred cEEEECCcH----HHHHHHHHhhccCCEEEEEe
Confidence 988754332 24677889999999998743
No 379
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=95.07 E-value=0.22 Score=38.74 Aligned_cols=96 Identities=9% Similarity=-0.035 Sum_probs=58.1
Q ss_pred CEEEEE-c-ccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029803 21 KKTIEI-G-VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 98 (187)
Q Consensus 21 ~~vLei-G-~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 98 (187)
++||-. | .+.|..++.+++.. +.+|++++.+++..+.+++ .+...-+.....+..+.+..+.. ...+|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~~~~~~v~~~~~----~~g~D 235 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE--GFRPIVTVRRDEQIALLKD----IGAAHVLNEKAPDFEATLREVMK----AEQPR 235 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHH----HTCSEEEETTSTTHHHHHHHHHH----HHCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCCEEEECCcHHHHHHHHHHhc----CCCCc
Confidence 566654 3 33566777777765 5699999999998887764 34321111111233333333211 14799
Q ss_pred EEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 99 YAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 99 ~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
++|-.... ..++.+++.|+++|.++.-.
T Consensus 236 ~vid~~g~----~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 236 IFLDAVTG----PLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp EEEESSCH----HHHHHHHHHSCTTCEEEECC
T ss_pred EEEECCCC----hhHHHHHhhhcCCCEEEEEe
Confidence 88754322 23477889999999998854
No 380
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=95.01 E-value=0.068 Score=43.39 Aligned_cols=101 Identities=13% Similarity=0.059 Sum_probs=64.6
Q ss_pred HHcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcc-----------h--
Q 029803 16 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESE-----------A-- 80 (187)
Q Consensus 16 ~~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d-----------~-- 80 (187)
+..++++||-+|+ +.|..++.+|+.. +.++++++.+++.++.+++ .|...-+.....| .
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~--Ga~vi~~~~~~~~~~~~~~----lGa~~vi~~~~~d~~~~~~~~~~~~~~ 298 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAG--GANPICVVSSPQKAEICRA----MGAEAIIDRNAEGYRFWKDENTQDPKE 298 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCCEEEETTTTTCCSEEETTEECHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc--CCeEEEEECCHHHHHHHHh----hCCcEEEecCcCcccccccccccchHH
Confidence 3457789999996 5678888888875 5799999988888777754 3432111111111 0
Q ss_pred ----HHHHHHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 81 ----LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 81 ----~~~~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.+.+..+. ....+|+||-... ...++.+++.|+++|.++.-.
T Consensus 299 ~~~~~~~i~~~t----~g~g~Dvvid~~G----~~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 299 WKRFGKRIRELT----GGEDIDIVFEHPG----RETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHHHHH----TSCCEEEEEECSC----HHHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHHHHHh----CCCCCcEEEEcCC----chhHHHHHHHhhCCcEEEEEe
Confidence 12222221 2358998775322 156788899999999998743
No 381
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=94.99 E-value=0.036 Score=43.22 Aligned_cols=74 Identities=14% Similarity=-0.058 Sum_probs=51.0
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEE-EEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHH-HHhhcccCCCc
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQI-TAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD-QLLKYSENEGS 96 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v-~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~ 96 (187)
++.+++|+.||.|..+.-+..+--+...+ .++|+++.+.+..+.|+... ++++|+.+... .+. ...
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-------~~~~DI~~~~~~~i~-----~~~ 76 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-------VQVKNLDSISIKQIE-----SLN 76 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-------CBCCCTTTCCHHHHH-----HTC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-------cccCChhhcCHHHhc-----cCC
Confidence 45689999999999998887652101345 69999999999999887421 45667655322 221 136
Q ss_pred eeEEEEeC
Q 029803 97 FDYAFVDA 104 (187)
Q Consensus 97 ~D~i~~d~ 104 (187)
+|+++...
T Consensus 77 ~Dil~ggp 84 (327)
T 3qv2_A 77 CNTWFMSP 84 (327)
T ss_dssp CCEEEECC
T ss_pred CCEEEecC
Confidence 89998764
No 382
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=94.98 E-value=0.056 Score=42.21 Aligned_cols=98 Identities=13% Similarity=0.095 Sum_probs=57.4
Q ss_pred HHcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029803 16 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 93 (187)
Q Consensus 16 ~~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 93 (187)
+..++++||-+|+ +.|..++.+|+... ..+|++++ +++..+.++ .+...-+. ...+..+.+..+ .
T Consensus 139 ~~~~g~~VlV~Ga~G~vG~~a~qla~~~g-~~~V~~~~-~~~~~~~~~-----~ga~~~~~-~~~~~~~~~~~~-----~ 205 (349)
T 4a27_A 139 NLREGMSVLVHSAGGGVGQAVAQLCSTVP-NVTVFGTA-STFKHEAIK-----DSVTHLFD-RNADYVQEVKRI-----S 205 (349)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHTTST-TCEEEEEE-CGGGHHHHG-----GGSSEEEE-TTSCHHHHHHHH-----C
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcC-CcEEEEeC-CHHHHHHHH-----cCCcEEEc-CCccHHHHHHHh-----c
Confidence 3557789999997 45778888887664 56888887 555444433 34332122 222333333333 1
Q ss_pred CCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 94 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 94 ~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.+.+|+||-....+ .++.+++.|+++|.++.-.
T Consensus 206 ~~g~Dvv~d~~g~~----~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 206 AEGVDIVLDCLCGD----NTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp TTCEEEEEEECC-----------CTTEEEEEEEEEEC
T ss_pred CCCceEEEECCCch----hHHHHHHHhhcCCEEEEEC
Confidence 35899888543222 2367889999999998743
No 383
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=94.98 E-value=0.1 Score=40.84 Aligned_cols=106 Identities=13% Similarity=0.066 Sum_probs=59.1
Q ss_pred HcCC-CEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEE---cchHHHHHHHhhc
Q 029803 17 LVNA-KKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE---SEALSVLDQLLKY 90 (187)
Q Consensus 17 ~~~~-~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~---~d~~~~~~~~~~~ 90 (187)
..++ .+||-+|+ +.|..++.+|+.. +.+++++..+++..+..++.++..|...-+.... .+..+.+..+...
T Consensus 164 ~~~g~~~VlV~Ga~G~vG~~aiqlak~~--Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~ 241 (364)
T 1gu7_A 164 LTPGKDWFIQNGGTSAVGKYASQIGKLL--NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQ 241 (364)
T ss_dssp CCTTTCEEEESCTTSHHHHHHHHHHHHH--TCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHH
T ss_pred cCCCCcEEEECCCCcHHHHHHHHHHHHC--CCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhc
Confidence 4466 89999985 5677888888875 5688887655554222223334445432111110 2222333322100
Q ss_pred ccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 91 SENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 91 ~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
....+|+||-... ..... .+++.|+++|.++.-.
T Consensus 242 --~~~g~Dvvid~~G---~~~~~-~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 242 --SGGEAKLALNCVG---GKSST-GIARKLNNNGLMLTYG 275 (364)
T ss_dssp --HTCCEEEEEESSC---HHHHH-HHHHTSCTTCEEEECC
T ss_pred --cCCCceEEEECCC---chhHH-HHHHHhccCCEEEEec
Confidence 0257998875332 12233 6789999999998744
No 384
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.93 E-value=0.13 Score=40.55 Aligned_cols=98 Identities=14% Similarity=0.148 Sum_probs=58.9
Q ss_pred cCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 18 VNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 18 ~~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
.++++|+-+|+| .|..+..++... +.+|+.+|.+++.++.+++.... .+.....+..+....+ ..
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~--Ga~V~v~dr~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~-------~~ 230 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGL--GAQVQIFDINVERLSYLETLFGS-----RVELLYSNSAEIETAV-------AE 230 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGG-----GSEEEECCHHHHHHHH-------HT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhhCc-----eeEeeeCCHHHHHHHH-------cC
Confidence 356899999985 344555566655 45999999999888877665422 2333333332332332 36
Q ss_pred eeEEEEeCCCcc--cHH-HHHHHHhccCCCeEEEEe
Q 029803 97 FDYAFVDADKDN--YCN-YHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 97 ~D~i~~d~~~~~--~~~-~~~~~~~~L~~gG~lv~~ 129 (187)
+|+|+-...... .+. ..+...+.+++||+++--
T Consensus 231 ~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv 266 (361)
T 1pjc_A 231 ADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDV 266 (361)
T ss_dssp CSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEET
T ss_pred CCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEE
Confidence 898875432211 011 134567889999987753
No 385
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=94.79 E-value=0.043 Score=42.87 Aligned_cols=73 Identities=11% Similarity=0.052 Sum_probs=50.8
Q ss_pred CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHH-HHhhcccCCCcee
Q 029803 20 AKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD-QLLKYSENEGSFD 98 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~~D 98 (187)
+.+++|+.||.|..+.-+..+--....+.++|+++.+.+..+.|+.. ..++.+|+.+... .+. ...+|
T Consensus 3 ~~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~------~~~~~~DI~~~~~~~~~-----~~~~D 71 (333)
T 4h0n_A 3 SHKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE------TNLLNRNIQQLTPQVIK-----KWNVD 71 (333)
T ss_dssp CEEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECCCGGGCCHHHHH-----HTTCC
T ss_pred CCEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC------CceeccccccCCHHHhc-----cCCCC
Confidence 35799999999999988876521013578999999998888887632 3456778765422 221 13689
Q ss_pred EEEEe
Q 029803 99 YAFVD 103 (187)
Q Consensus 99 ~i~~d 103 (187)
+++..
T Consensus 72 ~l~gg 76 (333)
T 4h0n_A 72 TILMS 76 (333)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 99865
No 386
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=94.67 E-value=0.2 Score=39.48 Aligned_cols=99 Identities=16% Similarity=0.175 Sum_probs=57.0
Q ss_pred cCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 18 VNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 18 ~~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
.++++|+-+|+| .|......+... +.+|+.+|.+++..+.+++.+ +. .+.....+..+ +.... ..
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~--Ga~V~~~d~~~~~~~~~~~~~---g~--~~~~~~~~~~~-l~~~~------~~ 229 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGM--GAQVTILDVNHKRLQYLDDVF---GG--RVITLTATEAN-IKKSV------QH 229 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHT---TT--SEEEEECCHHH-HHHHH------HH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHhc---Cc--eEEEecCCHHH-HHHHH------hC
Confidence 457899999984 334444444443 569999999988776655432 32 23333333322 22221 46
Q ss_pred eeEEEEeCCCcc--cHH-HHHHHHhccCCCeEEEEeC
Q 029803 97 FDYAFVDADKDN--YCN-YHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 97 ~D~i~~d~~~~~--~~~-~~~~~~~~L~~gG~lv~~~ 130 (187)
+|+|+....... ... ..+.+.+.|++||+++.-.
T Consensus 230 ~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 230 ADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp CSEEEECCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred CCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 899876543221 111 2466778999999887543
No 387
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.67 E-value=0.38 Score=31.56 Aligned_cols=94 Identities=14% Similarity=0.122 Sum_probs=54.0
Q ss_pred CCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCCc
Q 029803 20 AKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGS 96 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~ 96 (187)
.++|+-+|+ |..+..++..+. .+.+|+.+|.+++..+..++. .+ +.++.+|..+ .+... ....
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~~----~~~~~~d~~~~~~l~~~-----~~~~ 69 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---ID----ALVINGDCTKIKTLEDA-----GIED 69 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---CS----SEEEESCTTSHHHHHHT-----TTTT
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---cC----cEEEEcCCCCHHHHHHc-----Cccc
Confidence 357888876 666666665542 256899999988766544432 12 4456666532 22221 1257
Q ss_pred eeEEEEeCCCcccHHHHHHHHhccCCCeEEE
Q 029803 97 FDYAFVDADKDNYCNYHERLMKLLKVGGIAV 127 (187)
Q Consensus 97 ~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv 127 (187)
+|+|++..........+..+.+.++++-+++
T Consensus 70 ~d~vi~~~~~~~~~~~~~~~~~~~~~~~ii~ 100 (140)
T 1lss_A 70 ADMYIAVTGKEEVNLMSSLLAKSYGINKTIA 100 (140)
T ss_dssp CSEEEECCSCHHHHHHHHHHHHHTTCCCEEE
T ss_pred CCEEEEeeCCchHHHHHHHHHHHcCCCEEEE
Confidence 8999986543333333444556677765444
No 388
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=94.62 E-value=0.079 Score=42.80 Aligned_cols=63 Identities=14% Similarity=0.114 Sum_probs=44.9
Q ss_pred cHHHHHHHHHHH----HHcCCCEEEEEcccccHHHHHHHhhCC----CCCEEEEEeCCcchHHHHHHHHHh
Q 029803 4 LTIHGQLMAMLL----RLVNAKKTIEIGVFTGYSLLLTALTIP----EDGQITAIDVNRETYEIGLPIIKK 66 (187)
Q Consensus 4 ~~~~~~ll~~l~----~~~~~~~vLeiG~g~G~~~~~la~~~~----~~~~v~~iD~~~~~~~~a~~~~~~ 66 (187)
++..+++|...+ ....+-+|+|+|+|.|.....++..+. ...+++.||+||...+.-++.+..
T Consensus 118 S~~FGe~la~~~~~~~~~~g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 118 SPLFAQTLARPVAQALDASGTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhcCCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 444455544332 223467999999999998888776542 134899999999998888888764
No 389
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=94.60 E-value=0.16 Score=40.94 Aligned_cols=100 Identities=14% Similarity=0.040 Sum_probs=63.8
Q ss_pred HHcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcch-------------
Q 029803 16 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA------------- 80 (187)
Q Consensus 16 ~~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~------------- 80 (187)
+..++++||-+|+ |.|..++.+++.. +.++++++.+++.++.+++ .+...-+.....+.
T Consensus 217 ~~~~g~~VlV~GasG~iG~~a~qla~~~--Ga~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~~~~~~~ 290 (447)
T 4a0s_A 217 QMKQGDIVLIWGASGGLGSYAIQFVKNG--GGIPVAVVSSAQKEAAVRA----LGCDLVINRAELGITDDIADDPRRVVE 290 (447)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCCCEEEHHHHTCCTTGGGCHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCCEEEecccccccccccccccccch
Confidence 4567789999996 5677888888875 5799999988887776643 35432111111110
Q ss_pred -----HHHHHHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 81 -----LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 81 -----~~~~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.+.+.... ...+|++|-.... ..++.+++.|+++|.++.-.
T Consensus 291 ~~~~~~~~v~~~~-----g~g~Dvvid~~G~----~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 291 TGRKLAKLVVEKA-----GREPDIVFEHTGR----VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHH-----SSCCSEEEECSCH----HHHHHHHHHSCTTCEEEESC
T ss_pred hhhHHHHHHHHHh-----CCCceEEEECCCc----hHHHHHHHHHhcCCEEEEEe
Confidence 11222221 3579988754322 36788889999999998854
No 390
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=94.35 E-value=0.18 Score=39.64 Aligned_cols=97 Identities=20% Similarity=0.165 Sum_probs=59.9
Q ss_pred HcCCCEEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 17 LVNAKKTIEIG--VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 17 ~~~~~~vLeiG--~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
..++++||-+| .+.|..++.+++.. +.+|++++ +++..+.++ ..+... ++..+..+....+.. .
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~--Ga~Vi~~~-~~~~~~~~~----~lGa~~---v~~~~~~~~~~~~~~----~ 246 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW--DAHVTAVC-SQDASELVR----KLGADD---VIDYKSGSVEEQLKS----L 246 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHHH----HTTCSE---EEETTSSCHHHHHHT----S
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEe-ChHHHHHHH----HcCCCE---EEECCchHHHHHHhh----c
Confidence 45678999999 45778888888875 46899888 666665553 345321 222211122222221 2
Q ss_pred CceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEe
Q 029803 95 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 95 ~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
..+|+||-..... ...++.+++.++++|.++.-
T Consensus 247 ~g~D~vid~~g~~--~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 247 KPFDFILDNVGGS--TETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp CCBSEEEESSCTT--HHHHGGGGBCSSSCCEEEES
T ss_pred CCCCEEEECCCCh--hhhhHHHHHhhcCCcEEEEe
Confidence 5799887543221 13456778999999999874
No 391
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.26 E-value=0.54 Score=31.79 Aligned_cols=97 Identities=13% Similarity=0.059 Sum_probs=58.8
Q ss_pred CCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCc-chHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCC
Q 029803 20 AKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNR-ETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEG 95 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~-~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~ 95 (187)
..+|+-+|+ |..+..+++.+. .+.+|+.+|.++ +..+..++.. ...+.++.+|+.+ .+... .-.
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a-----~i~ 70 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKA-----GID 70 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHH-----TTT
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHc-----Chh
Confidence 457888775 777777766552 256899999974 4444444332 1237788898754 33332 135
Q ss_pred ceeEEEEeCCCcccHHHHHHHHhccCCCeEEEE
Q 029803 96 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 96 ~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
..|+|++...............+.+.|...++.
T Consensus 71 ~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 71 RCRAILALSDNDADNAFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp TCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEE
T ss_pred hCCEEEEecCChHHHHHHHHHHHHHCCCCEEEE
Confidence 789998865443333344445566667666665
No 392
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=94.17 E-value=0.12 Score=39.67 Aligned_cols=89 Identities=13% Similarity=0.120 Sum_probs=58.6
Q ss_pred HHcCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 16 RLVNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 16 ~~~~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
+..++++||-+|+| .|..++.+|+.. +.+|++++ +++..+.+++. |. -.++. | ...+ .
T Consensus 139 ~~~~g~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~-~~~~~~~~~~l----Ga---~~v~~-d----~~~v------~ 197 (315)
T 3goh_A 139 PLTKQREVLIVGFGAVNNLLTQMLNNA--GYVVDLVS-ASLSQALAAKR----GV---RHLYR-E----PSQV------T 197 (315)
T ss_dssp CCCSCCEEEEECCSHHHHHHHHHHHHH--TCEEEEEC-SSCCHHHHHHH----TE---EEEES-S----GGGC------C
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEE-ChhhHHHHHHc----CC---CEEEc-C----HHHh------C
Confidence 34577899999985 477888888876 46999999 89888887652 42 12222 3 1221 3
Q ss_pred CceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEe
Q 029803 95 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 95 ~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
..+|+||-..... .+..+++.|+++|.++.-
T Consensus 198 ~g~Dvv~d~~g~~----~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 198 QKYFAIFDAVNSQ----NAAALVPSLKANGHIICI 228 (315)
T ss_dssp SCEEEEECC-----------TTGGGEEEEEEEEEE
T ss_pred CCccEEEECCCch----hHHHHHHHhcCCCEEEEE
Confidence 6899887432221 235678999999998874
No 393
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=94.16 E-value=0.18 Score=39.59 Aligned_cols=94 Identities=16% Similarity=0.111 Sum_probs=59.0
Q ss_pred CCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCc---chHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029803 20 AKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNR---ETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 95 (187)
Q Consensus 20 ~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~---~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 95 (187)
+++||-+|+| .|..++.+++.. +.+|++++.++ +..+.+++ .+.. .+. ..+..+.+... ..
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~~~----~ga~-~v~--~~~~~~~~~~~------~~ 245 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY--GLEVWMANRREPTEVEQTVIEE----TKTN-YYN--SSNGYDKLKDS------VG 245 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH--TCEEEEEESSCCCHHHHHHHHH----HTCE-EEE--CTTCSHHHHHH------HC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCccchHHHHHHHH----hCCc-eec--hHHHHHHHHHh------CC
Confidence 7899999974 355666677664 46999999988 66665553 3432 121 11222222221 15
Q ss_pred ceeEEEEeCCCcccHHHH-HHHHhccCCCeEEEEeCC
Q 029803 96 SFDYAFVDADKDNYCNYH-ERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 96 ~~D~i~~d~~~~~~~~~~-~~~~~~L~~gG~lv~~~~ 131 (187)
.+|+||-..... ..+ +.+++.|+++|.++.-..
T Consensus 246 ~~d~vid~~g~~---~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 246 KFDVIIDATGAD---VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp CEEEEEECCCCC---THHHHHHGGGEEEEEEEEECSC
T ss_pred CCCEEEECCCCh---HHHHHHHHHHHhcCCEEEEEec
Confidence 799888654332 245 778899999999987543
No 394
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.07 E-value=0.66 Score=37.66 Aligned_cols=102 Identities=14% Similarity=0.213 Sum_probs=60.0
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCC-CCEEEEEeCCcchHHHHHHHHHhc---C---------CCCcEEEEEcchHHHHH
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPE-DGQITAIDVNRETYEIGLPIIKKA---G---------VDHKINFIESEALSVLD 85 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~---~---------~~~~~~~~~~d~~~~~~ 85 (187)
...+|--||+ |+++..+|..+.. +.+|+++|.+++.++..++..... + ...++++ ..|..+.+
T Consensus 7 ~~~~~~vIGl--G~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~-ttd~~ea~- 82 (446)
T 4a7p_A 7 GSVRIAMIGT--GYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSF-TTDLAEGV- 82 (446)
T ss_dssp CCCEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHH-
T ss_pred CceEEEEEcC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEE-ECCHHHHH-
Confidence 3456777776 6666666555432 568999999999877665421000 0 0112332 23433321
Q ss_pred HHhhcccCCCceeEEEEeC-CCc----------ccHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 86 QLLKYSENEGSFDYAFVDA-DKD----------NYCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 86 ~~~~~~~~~~~~D~i~~d~-~~~----------~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
...|+||+.. .+. .....++.+.+.|++|.++|...+..
T Consensus 83 ---------~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~ 132 (446)
T 4a7p_A 83 ---------KDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVP 132 (446)
T ss_dssp ---------TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCC
T ss_pred ---------hcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCC
Confidence 4578998863 222 24566777888999988888765543
No 395
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=94.05 E-value=0.19 Score=41.21 Aligned_cols=58 Identities=9% Similarity=-0.082 Sum_probs=43.3
Q ss_pred CEEEEEcccccHHHHHHHhhCCCCC-EEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029803 21 KKTIEIGVFTGYSLLLTALTIPEDG-QITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 84 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 84 (187)
.+++|+.||.|..++-+..+ +. .+.++|+++.+.+.-+.|+.. .....++.+|+.++.
T Consensus 89 ~~viDLFaG~GGlslG~~~a---G~~~v~avE~d~~A~~ty~~N~~~---~p~~~~~~~DI~~i~ 147 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESI---GGQCVFTSEWNKHAVRTYKANHYC---DPATHHFNEDIRDIT 147 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTT---TEEEEEEECCCHHHHHHHHHHSCC---CTTTCEEESCTHHHH
T ss_pred ceEEEecCCccHHHHHHHHC---CCEEEEEEeCCHHHHHHHHHhccc---CCCcceeccchhhhh
Confidence 47999999999999888764 33 478899999888887777521 123456778887754
No 396
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=94.01 E-value=0.66 Score=37.48 Aligned_cols=104 Identities=13% Similarity=0.194 Sum_probs=60.6
Q ss_pred HHcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHH------------HHhcCCCCcEEEEEcchHHH
Q 029803 16 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPI------------IKKAGVDHKINFIESEALSV 83 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~------------~~~~~~~~~~~~~~~d~~~~ 83 (187)
+..+-++|--||+ |+.+..+|..+..+.+|+++|.+++.++..++. +.. + ..++++ ..|..+.
T Consensus 32 r~~~~mkIaVIGl--G~mG~~lA~~La~G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~-~-~~~l~~-ttd~~ea 106 (432)
T 3pid_A 32 RGSEFMKITISGT--GYVGLSNGVLIAQNHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAE-K-PLNFRA-TTDKHDA 106 (432)
T ss_dssp ---CCCEEEEECC--SHHHHHHHHHHHTTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHH-S-CCCEEE-ESCHHHH
T ss_pred cccCCCEEEEECc--CHHHHHHHHHHHcCCeEEEEecCHHHhhHHhccCCccccccHHHHHhh-c-cCCeEE-EcCHHHH
Confidence 3445567888887 555555555554467999999999888766542 111 0 112322 2343332
Q ss_pred HHHHhhcccCCCceeEEEEeCCCc-----------ccHHHHHHHHhccCCCeEEEEeCCCCCc
Q 029803 84 LDQLLKYSENEGSFDYAFVDADKD-----------NYCNYHERLMKLLKVGGIAVYDNTLWGG 135 (187)
Q Consensus 84 ~~~~~~~~~~~~~~D~i~~d~~~~-----------~~~~~~~~~~~~L~~gG~lv~~~~~~~~ 135 (187)
+ ...|+||+..... ......+.+.+ |++|.+++...+...|
T Consensus 107 ~----------~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pg 158 (432)
T 3pid_A 107 Y----------RNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVG 158 (432)
T ss_dssp H----------TTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTT
T ss_pred H----------hCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChH
Confidence 1 4579998864221 23455677778 9999888876555433
No 397
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.00 E-value=0.28 Score=32.66 Aligned_cols=93 Identities=11% Similarity=0.109 Sum_probs=54.7
Q ss_pred CCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCCc
Q 029803 20 AKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGS 96 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~ 96 (187)
.++|+-+|+ |..+..+++.+. .+.+|+.+|.+++.++.+++. ...++.+|..+ .+... ....
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~--------~~~~~~gd~~~~~~l~~~-----~~~~ 70 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE--------GFDAVIADPTDESFYRSL-----DLEG 70 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT--------TCEEEECCTTCHHHHHHS-----CCTT
T ss_pred CCEEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC--------CCcEEECCCCCHHHHHhC-----Cccc
Confidence 457899887 556666665542 257899999998876655431 25677888754 33332 1357
Q ss_pred eeEEEEeCCCcccHHHHHHHHhccCCCeEEEE
Q 029803 97 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 97 ~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
+|+|++...........-...+.+. ...++.
T Consensus 71 ~d~vi~~~~~~~~n~~~~~~a~~~~-~~~iia 101 (141)
T 3llv_A 71 VSAVLITGSDDEFNLKILKALRSVS-DVYAIV 101 (141)
T ss_dssp CSEEEECCSCHHHHHHHHHHHHHHC-CCCEEE
T ss_pred CCEEEEecCCHHHHHHHHHHHHHhC-CceEEE
Confidence 8999886542222222233334455 444444
No 398
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.98 E-value=0.15 Score=40.50 Aligned_cols=97 Identities=19% Similarity=0.182 Sum_probs=58.7
Q ss_pred CCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEE---------cc---------
Q 029803 19 NAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE---------SE--------- 79 (187)
Q Consensus 19 ~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~---------~d--------- 79 (187)
++.+|+-||+| .|..+..++..+ +.+|+.+|.+++.++.+++. |. +++. +.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~l----Ga----~~~~l~~~~~~~~gya~~~~~~~~ 252 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL--GAKTTGYDVRPEVAEQVRSV----GA----QWLDLGIDAAGEGGYARELSEAER 252 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSGGGHHHHHHT----TC----EECCCC-------------CHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc----CC----eEEeccccccccccchhhhhHHHH
Confidence 67899999997 455666666665 46999999999887776642 21 1111 00
Q ss_pred --hHHHHHHHhhcccCCCceeEEEEeCC-C--cccHHHHHHHHhccCCCeEEEEeCC
Q 029803 80 --ALSVLDQLLKYSENEGSFDYAFVDAD-K--DNYCNYHERLMKLLKVGGIAVYDNT 131 (187)
Q Consensus 80 --~~~~~~~~~~~~~~~~~~D~i~~d~~-~--~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
..+.+.+. -...|+|+.... + ....-+-+.+.+.+|||++|+=-.+
T Consensus 253 ~~~~~~l~e~------l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~ 303 (381)
T 3p2y_A 253 AQQQQALEDA------ITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAG 303 (381)
T ss_dssp HHHHHHHHHH------HTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred hhhHHHHHHH------HhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeC
Confidence 01122232 267999986531 1 1111123677889999888775433
No 399
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=93.98 E-value=0.23 Score=38.85 Aligned_cols=99 Identities=14% Similarity=0.100 Sum_probs=60.9
Q ss_pred HHHcCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcc--hHHHHHHHhhcc
Q 029803 15 LRLVNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESE--ALSVLDQLLKYS 91 (187)
Q Consensus 15 ~~~~~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d--~~~~~~~~~~~~ 91 (187)
.+..++++||-+|+| .|..++.+|+... +.+|+++|.+++..+.+++ .|... ++... ..+.+..+.
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~---vi~~~~~~~~~v~~~~--- 250 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMT-PATVIALDVKEEKLKLAER----LGADH---VVDARRDPVKQVMELT--- 250 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESSHHHHHHHHH----TTCSE---EEETTSCHHHHHHHHT---
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEeCCHHHHHHHHH----hCCCE---EEeccchHHHHHHHHh---
Confidence 345677899999974 4566777887752 4689999999888777753 34321 22211 223333331
Q ss_pred cCCCceeEEEEeCCCcccHH--HHHHHHhccCCCeEEEEeC
Q 029803 92 ENEGSFDYAFVDADKDNYCN--YHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 92 ~~~~~~D~i~~d~~~~~~~~--~~~~~~~~L~~gG~lv~~~ 130 (187)
....+|+||-... ... .++.+++. ++|.++.-.
T Consensus 251 -~g~g~Dvvid~~G---~~~~~~~~~~~~~--~~G~~v~~g 285 (359)
T 1h2b_A 251 -RGRGVNVAMDFVG---SQATVDYTPYLLG--RMGRLIIVG 285 (359)
T ss_dssp -TTCCEEEEEESSC---CHHHHHHGGGGEE--EEEEEEECC
T ss_pred -CCCCCcEEEECCC---CchHHHHHHHhhc--CCCEEEEEe
Confidence 1237998875432 223 56667777 899888743
No 400
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=93.93 E-value=0.061 Score=41.39 Aligned_cols=91 Identities=11% Similarity=0.107 Sum_probs=60.2
Q ss_pred EEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeE
Q 029803 22 KTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDY 99 (187)
Q Consensus 22 ~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~ 99 (187)
+||-+|+ +.|..++.+|+.. +.+|++++.+++..+.+++ .|... ++..+..+....+ ....+|+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~---vi~~~~~~~~~~~-----~~~~~d~ 214 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL--GYQVAAVSGRESTHGYLKS----LGANR---ILSRDEFAESRPL-----EKQLWAG 214 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHHHHH----HTCSE---EEEGGGSSCCCSS-----CCCCEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCCE---EEecCCHHHHHhh-----cCCCccE
Confidence 4999986 5788899999876 5699999999998888865 34321 2211111111111 1357997
Q ss_pred EEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 100 AFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 100 i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
+|- ..- ...++.+++.|+++|.++.-.
T Consensus 215 v~d-~~g---~~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 215 AID-TVG---DKVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp EEE-SSC---HHHHHHHHHTEEEEEEEEECC
T ss_pred EEE-CCC---cHHHHHHHHHHhcCCEEEEEe
Confidence 664 322 237888999999999998753
No 401
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=93.60 E-value=1.7 Score=34.15 Aligned_cols=92 Identities=11% Similarity=0.016 Sum_probs=57.8
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
+.++|.-||+ |..+..++..+. .+.+|+++|.+++.++.+.+ .+. . ...+..+.+.. ....
T Consensus 21 ~~mkIgiIGl--G~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~----~g~----~-~~~s~~e~~~~-------a~~~ 82 (358)
T 4e21_A 21 QSMQIGMIGL--GRMGADMVRRLRKGGHECVVYDLNVNAVQALER----EGI----A-GARSIEEFCAK-------LVKP 82 (358)
T ss_dssp -CCEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT----TTC----B-CCSSHHHHHHH-------SCSS
T ss_pred cCCEEEEECc--hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH----CCC----E-EeCCHHHHHhc-------CCCC
Confidence 4568889987 444444444432 25689999999876665442 222 1 12344444443 2456
Q ss_pred eEEEEeCCCcccHHHHHHHHhccCCCeEEEE
Q 029803 98 DYAFVDADKDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 98 D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
|+||+..........++.+.+.+++|.+++-
T Consensus 83 DvVi~~vp~~~v~~vl~~l~~~l~~g~iiId 113 (358)
T 4e21_A 83 RVVWLMVPAAVVDSMLQRMTPLLAANDIVID 113 (358)
T ss_dssp CEEEECSCGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred CEEEEeCCHHHHHHHHHHHHhhCCCCCEEEe
Confidence 9999876555666778888889998876654
No 402
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=93.51 E-value=0.27 Score=39.00 Aligned_cols=42 Identities=24% Similarity=0.234 Sum_probs=31.5
Q ss_pred CCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHH
Q 029803 19 NAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLP 62 (187)
Q Consensus 19 ~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~ 62 (187)
++.+|+-+|+| .|..++.+++.+ +.+|+.+|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~--Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL--GAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 68899999987 455566666665 4689999999887776653
No 403
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=93.41 E-value=0.13 Score=41.07 Aligned_cols=62 Identities=13% Similarity=0.176 Sum_probs=42.6
Q ss_pred cHHHHHHHHHHHH-----HcC--CCEEEEEcccccHHHHHHHhhCC------CCCEEEEEeCCcchHHHHHHHHH
Q 029803 4 LTIHGQLMAMLLR-----LVN--AKKTIEIGVFTGYSLLLTALTIP------EDGQITAIDVNRETYEIGLPIIK 65 (187)
Q Consensus 4 ~~~~~~ll~~l~~-----~~~--~~~vLeiG~g~G~~~~~la~~~~------~~~~v~~iD~~~~~~~~a~~~~~ 65 (187)
++..+++|...+. ... +-.|+|+|+|.|..+..+++.+. ...+++.||.||...+.-++.+.
T Consensus 58 s~~FGe~la~~~~~~w~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 132 (387)
T 1zkd_A 58 SQMFGELLGLWSASVWKAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLA 132 (387)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhc
Confidence 4455555554432 222 34799999999999888876542 24589999999988876666554
No 404
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.27 E-value=0.21 Score=40.18 Aligned_cols=95 Identities=12% Similarity=0.052 Sum_probs=61.2
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCC
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEG 95 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~ 95 (187)
+..+|+-+|+ |..+..+++.+. .+..|+.+|.+++.++.+++ .+ +.++.||+.+ .+... .-.
T Consensus 3 ~~~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~g----~~vi~GDat~~~~L~~a-----gi~ 67 (413)
T 3l9w_A 3 HGMRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----FG----MKVFYGDATRMDLLESA-----GAA 67 (413)
T ss_dssp -CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----TT----CCCEESCTTCHHHHHHT-----TTT
T ss_pred CCCeEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----CC----CeEEEcCCCCHHHHHhc-----CCC
Confidence 3457888876 555555555442 25789999999998887663 22 5578888854 34432 235
Q ss_pred ceeEEEEeCCCcccHHHHHHHHhccCCCeEEEE
Q 029803 96 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 96 ~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
..|+|++..........+-...+.+.|+..++.
T Consensus 68 ~A~~viv~~~~~~~n~~i~~~ar~~~p~~~Iia 100 (413)
T 3l9w_A 68 KAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIA 100 (413)
T ss_dssp TCSEEEECCSSHHHHHHHHHHHHHHCTTCEEEE
T ss_pred ccCEEEECCCChHHHHHHHHHHHHhCCCCeEEE
Confidence 789988865443333344445577788866665
No 405
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=93.09 E-value=0.45 Score=36.46 Aligned_cols=96 Identities=10% Similarity=-0.016 Sum_probs=60.3
Q ss_pred HHHHcCCCEEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH-HHHHHhhc
Q 029803 14 LLRLVNAKKTIEIG--VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS-VLDQLLKY 90 (187)
Q Consensus 14 l~~~~~~~~vLeiG--~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~ 90 (187)
..+..++++||-+| .+.|..++.+|+.. +.+|++++ +++..+.++ ..+... ++..+..+ ....
T Consensus 147 ~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~--Ga~vi~~~-~~~~~~~~~----~lGa~~---~i~~~~~~~~~~~---- 212 (321)
T 3tqh_A 147 QAEVKQGDVVLIHAGAGGVGHLAIQLAKQK--GTTVITTA-SKRNHAFLK----ALGAEQ---CINYHEEDFLLAI---- 212 (321)
T ss_dssp HTTCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE-CHHHHHHHH----HHTCSE---EEETTTSCHHHHC----
T ss_pred hcCCCCCCEEEEEcCCcHHHHHHHHHHHHc--CCEEEEEe-ccchHHHHH----HcCCCE---EEeCCCcchhhhh----
Confidence 34566788999996 44688888899876 56888887 444444444 345432 23222222 2222
Q ss_pred ccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 91 SENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 91 ~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
...+|+||-... . ..++.+++.|+++|.++.-.
T Consensus 213 ---~~g~D~v~d~~g---~-~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 213 ---STPVDAVIDLVG---G-DVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp ---CSCEEEEEESSC---H-HHHHHHGGGEEEEEEEEECC
T ss_pred ---ccCCCEEEECCC---c-HHHHHHHHhccCCCEEEEeC
Confidence 257998875322 1 23378899999999998753
No 406
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=92.98 E-value=1.5 Score=31.76 Aligned_cols=94 Identities=11% Similarity=0.038 Sum_probs=59.0
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCCc
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGS 96 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~ 96 (187)
..++|+-+|+ |..+..+++.+...+.|+.+|.+++.++.++ . .+.++.+|+.+ .+... .-..
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~~~~~-----~----~~~~i~gd~~~~~~l~~a-----~i~~ 71 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVLR-----S----GANFVHGDPTRVSDLEKA-----NVRG 71 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHHHHHH-----T----TCEEEESCTTCHHHHHHT-----TCTT
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHHHHHh-----c----CCeEEEcCCCCHHHHHhc-----Ccch
Confidence 4567888886 7888888888753333899999988665443 1 27788998864 33332 1357
Q ss_pred eeEEEEeCCCcccHHHHHHHHhccCCCeEEEE
Q 029803 97 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 97 ~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
.|.|++...........-...+.+.++..++.
T Consensus 72 ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia 103 (234)
T 2aef_A 72 ARAVIVDLESDSETIHCILGIRKIDESVRIIA 103 (234)
T ss_dssp CSEEEECCSCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred hcEEEEcCCCcHHHHHHHHHHHHHCCCCeEEE
Confidence 89988865433322333444566778766665
No 407
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.97 E-value=0.43 Score=33.29 Aligned_cols=95 Identities=11% Similarity=0.096 Sum_probs=54.8
Q ss_pred CCEEEEEcccccHHHHHHHhhCC-C-CCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCC
Q 029803 20 AKKTIEIGVFTGYSLLLTALTIP-E-DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEG 95 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~la~~~~-~-~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~ 95 (187)
..+|+-+|+ |..+..+++.+. . +.+|+++|.+++..+.+++ .+ +.++.+|..+ .+... ....
T Consensus 39 ~~~v~IiG~--G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~g----~~~~~gd~~~~~~l~~~----~~~~ 104 (183)
T 3c85_A 39 HAQVLILGM--GRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----EG----RNVISGDATDPDFWERI----LDTG 104 (183)
T ss_dssp TCSEEEECC--SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----TT----CCEEECCTTCHHHHHTB----CSCC
T ss_pred CCcEEEECC--CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----CC----CCEEEcCCCCHHHHHhc----cCCC
Confidence 347888876 666666665542 2 4689999999887665442 23 4466676543 23221 0125
Q ss_pred ceeEEEEeCCCcccHHHHHHHHhccCCCeEEEE
Q 029803 96 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 96 ~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
.+|+|++...........-...+.+.|+..++.
T Consensus 105 ~ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~ 137 (183)
T 3c85_A 105 HVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAA 137 (183)
T ss_dssp CCCEEEECCSSHHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHHCCCCEEEE
Confidence 789998854332222222234456677777776
No 408
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.97 E-value=0.58 Score=33.68 Aligned_cols=93 Identities=17% Similarity=0.075 Sum_probs=57.6
Q ss_pred EEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCCcee
Q 029803 22 KTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGSFD 98 (187)
Q Consensus 22 ~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~D 98 (187)
+|+-+|+ |..+..+++.+. .+..|+.+|.+++.++...+. . ...++.+|+.+ .+... .-...|
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---~----~~~~i~gd~~~~~~l~~a-----~i~~ad 67 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---L----KATIIHGDGSHKEILRDA-----EVSKND 67 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---S----SSEEEESCTTSHHHHHHH-----TCCTTC
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---c----CCeEEEcCCCCHHHHHhc-----CcccCC
Confidence 5677775 777777776552 257899999998876654432 1 25678888754 33332 135789
Q ss_pred EEEEeCCCcccHHHHHHHHhccCCCeEEEE
Q 029803 99 YAFVDADKDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 99 ~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
++++..........+....+.+.+...++.
T Consensus 68 ~vi~~~~~d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 68 VVVILTPRDEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp EEEECCSCHHHHHHHHHHHHHTSCCCEEEE
T ss_pred EEEEecCCcHHHHHHHHHHHHHcCCCeEEE
Confidence 998865443333344444555556666665
No 409
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=92.90 E-value=0.33 Score=38.87 Aligned_cols=42 Identities=24% Similarity=0.232 Sum_probs=33.4
Q ss_pred CCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHH
Q 029803 19 NAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLP 62 (187)
Q Consensus 19 ~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~ 62 (187)
++.+|+-||+| .|..+..++..+ +.+|+.+|.++..++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL--GAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH
Confidence 67899999998 566666777766 5699999999988776654
No 410
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=92.88 E-value=0.2 Score=38.64 Aligned_cols=96 Identities=13% Similarity=-0.058 Sum_probs=62.5
Q ss_pred CEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeEE
Q 029803 21 KKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYA 100 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i 100 (187)
.+|||+.||.|..++-+-.+- -.-+.++|+++.+.+.-+.|+. .+++.+|+.+.-.. .-...|++
T Consensus 1 mkvidLFsG~GG~~~G~~~aG--~~~v~a~e~d~~a~~ty~~N~~-------~~~~~~DI~~i~~~------~~~~~D~l 65 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAG--FRIICANEYDKSIWKTYESNHS-------AKLIKGDISKISSD------EFPKCDGI 65 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTT--CEEEEEEECCTTTHHHHHHHCC-------SEEEESCGGGCCGG------GSCCCSEE
T ss_pred CeEEEeCcCccHHHHHHHHCC--CEEEEEEeCCHHHHHHHHHHCC-------CCcccCChhhCCHh------hCCcccEE
Confidence 379999999999988876641 2346789999999988888752 35778898764222 13578988
Q ss_pred EEeCCC------------ccc----HHHHHHHHhccCCCeEEEEeCCC
Q 029803 101 FVDADK------------DNY----CNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 101 ~~d~~~------------~~~----~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
+..... .+. -..+-.+.+.++|. +++++|+-
T Consensus 66 ~ggpPCQ~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk-~~~~ENV~ 112 (331)
T 3ubt_Y 66 IGGPPSQSWSEGGSLRGIDDPRGKLFYEYIRILKQKKPI-FFLAENVK 112 (331)
T ss_dssp ECCCCGGGTEETTEECCTTCGGGHHHHHHHHHHHHHCCS-EEEEEECC
T ss_pred EecCCCCCcCCCCCccCCCCchhHHHHHHHHHHhccCCe-EEEeeeec
Confidence 754211 111 11122345677884 77787774
No 411
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=92.83 E-value=0.27 Score=38.96 Aligned_cols=95 Identities=11% Similarity=0.023 Sum_probs=65.1
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCC-cEEEEEcchHHHHHHHhhcccCCCce
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDH-KINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
.+.+||.++-+.|..++.++.. .++.+.-|--.....+.|++.+++.+ .+++...- + . ....|
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~-----~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~~--~---~------~~~~~ 101 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH-----KPYSIGDSYISELATRENLRLNGIDESSVKFLDST--A---D------YPQQP 101 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG-----CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEETT--S---C------CCSSC
T ss_pred CCCCEEEECCCCCHHHHhhccC-----CceEEEhHHHHHHHHHHHHHHcCCCccceEecccc--c---c------cccCC
Confidence 4468999999999999988753 33555434444456778888888864 35554321 1 1 14689
Q ss_pred eEEEEeCCCc--ccHHHHHHHHhccCCCeEEEEe
Q 029803 98 DYAFVDADKD--NYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 98 D~i~~d~~~~--~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
|+|++...+. .....+.++...|++|+.+++.
T Consensus 102 ~~v~~~lpk~~~~l~~~L~~l~~~l~~~~~i~~~ 135 (375)
T 4dcm_A 102 GVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAG 135 (375)
T ss_dssp SEEEEECCSCHHHHHHHHHHHHTTCCTTSEEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 9999876442 3445677888999999988764
No 412
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=92.83 E-value=0.29 Score=38.41 Aligned_cols=70 Identities=17% Similarity=0.137 Sum_probs=45.4
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCCc
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGS 96 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~ 96 (187)
+.++|+-+|| |..+..++..+.....|+..|.+.+.++.+++ ....+..|+.+ .+..+. ..
T Consensus 15 ~~mkilvlGa--G~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~---------~~~~~~~d~~d~~~l~~~~------~~ 77 (365)
T 3abi_A 15 RHMKVLILGA--GNIGRAIAWDLKDEFDVYIGDVNNENLEKVKE---------FATPLKVDASNFDKLVEVM------KE 77 (365)
T ss_dssp -CCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHTT---------TSEEEECCTTCHHHHHHHH------TT
T ss_pred CccEEEEECC--CHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhc---------cCCcEEEecCCHHHHHHHH------hC
Confidence 4568999998 66777777666657889999998876665432 24445555532 334432 56
Q ss_pred eeEEEEeCC
Q 029803 97 FDYAFVDAD 105 (187)
Q Consensus 97 ~D~i~~d~~ 105 (187)
.|+|+.-..
T Consensus 78 ~DvVi~~~p 86 (365)
T 3abi_A 78 FELVIGALP 86 (365)
T ss_dssp CSEEEECCC
T ss_pred CCEEEEecC
Confidence 898876543
No 413
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=92.56 E-value=0.63 Score=37.75 Aligned_cols=39 Identities=21% Similarity=0.233 Sum_probs=26.9
Q ss_pred CEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHH
Q 029803 21 KKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGL 61 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~ 61 (187)
.+|--||+ ||.++.+|..+. .+.+|+++|++++.++..+
T Consensus 22 ~~IaViGl--GYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln 61 (444)
T 3vtf_A 22 ASLSVLGL--GYVGVVHAVGFALLGHRVVGYDVNPSIVERLR 61 (444)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH
T ss_pred CEEEEEcc--CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH
Confidence 46888876 666555554442 2579999999998776654
No 414
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=92.53 E-value=2.8 Score=32.12 Aligned_cols=91 Identities=12% Similarity=-0.012 Sum_probs=54.6
Q ss_pred CCEEEEEcccccHHHHHHHhhCCC-C-CEEEEEeCCcchHH---HHHHHHHhcCCCCcEEEEEc-chHHHHHHHhhcccC
Q 029803 20 AKKTIEIGVFTGYSLLLTALTIPE-D-GQITAIDVNRETYE---IGLPIIKKAGVDHKINFIES-EALSVLDQLLKYSEN 93 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~la~~~~~-~-~~v~~iD~~~~~~~---~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~ 93 (187)
.++|--||+ |..+..++..+.. + .+|+++|.+++..+ ...+.+...+. .. +..+.
T Consensus 24 ~m~IgvIG~--G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-------~~~s~~e~---------- 84 (317)
T 4ezb_A 24 MTTIAFIGF--GEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV-------EPLDDVAG---------- 84 (317)
T ss_dssp CCEEEEECC--SHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC-------EEESSGGG----------
T ss_pred CCeEEEECc--cHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC-------CCCCHHHH----------
Confidence 357888887 5555555554422 4 58999999874222 22222333332 22 32222
Q ss_pred CCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEe
Q 029803 94 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 94 ~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
-...|+||+..........++.+.+.++++.+++-.
T Consensus 85 ~~~aDvVi~avp~~~~~~~~~~i~~~l~~~~ivv~~ 120 (317)
T 4ezb_A 85 IACADVVLSLVVGAATKAVAASAAPHLSDEAVFIDL 120 (317)
T ss_dssp GGGCSEEEECCCGGGHHHHHHHHGGGCCTTCEEEEC
T ss_pred HhcCCEEEEecCCHHHHHHHHHHHhhcCCCCEEEEC
Confidence 145799998766555566678888889998776653
No 415
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.46 E-value=0.29 Score=37.76 Aligned_cols=89 Identities=15% Similarity=0.134 Sum_probs=55.0
Q ss_pred CEEEEEcccccHHHHHHHhhCC-CCC--EEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029803 21 KKTIEIGVFTGYSLLLTALTIP-EDG--QITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 97 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~la~~~~-~~~--~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (187)
++|.-||+| ..+..++..+. .+. +|+++|.+++.++.+++ .+... ....+..+. . -...
T Consensus 34 ~kI~IIG~G--~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~----~G~~~---~~~~~~~~~---~------~~~a 95 (314)
T 3ggo_A 34 QNVLIVGVG--FMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LGIID---EGTTSIAKV---E------DFSP 95 (314)
T ss_dssp SEEEEESCS--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TTSCS---EEESCTTGG---G------GGCC
T ss_pred CEEEEEeeC--HHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH----CCCcc---hhcCCHHHH---h------hccC
Confidence 689999975 33333333331 133 89999999987766543 34321 122232220 1 1468
Q ss_pred eEEEEeCCCcccHHHHHHHHhccCCCeEEE
Q 029803 98 DYAFVDADKDNYCNYHERLMKLLKVGGIAV 127 (187)
Q Consensus 98 D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv 127 (187)
|+||+..........++++.+.++++.+++
T Consensus 96 DvVilavp~~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 96 DFVMLSSPVRTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp SEEEECSCGGGHHHHHHHHHHHSCTTCEEE
T ss_pred CEEEEeCCHHHHHHHHHHHhhccCCCcEEE
Confidence 999997766666778888888899887654
No 416
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.30 E-value=1.3 Score=32.79 Aligned_cols=79 Identities=15% Similarity=0.164 Sum_probs=46.8
Q ss_pred CCCEEEEEccc-ccHHHHH-HHhhCCCCCEEEEEeCCc-------------------chHHHHHHHHHhcCCCCcEEEEE
Q 029803 19 NAKKTIEIGVF-TGYSLLL-TALTIPEDGQITAIDVNR-------------------ETYEIGLPIIKKAGVDHKINFIE 77 (187)
Q Consensus 19 ~~~~vLeiG~g-~G~~~~~-la~~~~~~~~v~~iD~~~-------------------~~~~~a~~~~~~~~~~~~~~~~~ 77 (187)
+..+|+-+|+| .|...+. ++.. . -++++.+|.+. ...+.+.+.+...+..-.++.+.
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~-G-v~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 107 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASA-G-VGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN 107 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHH-T-CSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHc-C-CCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence 55789999986 2332222 3322 2 36999999887 66777777776644333456655
Q ss_pred cchHH-HHHHHhhcccCCCceeEEEEeCC
Q 029803 78 SEALS-VLDQLLKYSENEGSFDYAFVDAD 105 (187)
Q Consensus 78 ~d~~~-~~~~~~~~~~~~~~~D~i~~d~~ 105 (187)
.+..+ .+..+. ..+|+|+...+
T Consensus 108 ~~~~~~~~~~~~------~~~DvVi~~~d 130 (249)
T 1jw9_B 108 ALLDDAELAALI------AEHDLVLDCTD 130 (249)
T ss_dssp SCCCHHHHHHHH------HTSSEEEECCS
T ss_pred ccCCHhHHHHHH------hCCCEEEEeCC
Confidence 44432 223332 47998886543
No 417
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.23 E-value=1.4 Score=36.01 Aligned_cols=103 Identities=13% Similarity=0.094 Sum_probs=58.5
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHhc---CC---------CCcEEEEEcchHHH
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKA---GV---------DHKINFIESEALSV 83 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~---~~---------~~~~~~~~~d~~~~ 83 (187)
+....+|.-||+| +.+..+|..+. .+.+|+++|.+++.++..++..... ++ ..++.+ ..|..+.
T Consensus 5 ~~~~~~I~VIG~G--~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~-ttd~~~a 81 (478)
T 2y0c_A 5 HHGSMNLTIIGSG--SVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF-STDIEAA 81 (478)
T ss_dssp --CCCEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ECCHHHH
T ss_pred cCCCceEEEECcC--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE-ECCHHHH
Confidence 3456789999885 33333333332 1568999999998777665431000 00 012322 2233222
Q ss_pred HHHHhhcccCCCceeEEEEeCCC----------cccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 84 LDQLLKYSENEGSFDYAFVDADK----------DNYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 84 ~~~~~~~~~~~~~~D~i~~d~~~----------~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
+ ...|+||+.... ......++.+.+.++++.+++...+.
T Consensus 82 ~----------~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv 130 (478)
T 2y0c_A 82 V----------AHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTV 130 (478)
T ss_dssp H----------HHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCC
T ss_pred h----------hcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCc
Confidence 2 357999987433 34556777788899998877664433
No 418
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.21 E-value=0.43 Score=32.41 Aligned_cols=98 Identities=12% Similarity=0.026 Sum_probs=54.9
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccC
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSEN 93 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~ 93 (187)
..+..+|+-+|+ |..+..++..+. .+.+|+.+|.+++.++.+++ .. ...++.+|..+ .+... .
T Consensus 16 ~~~~~~v~IiG~--G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~----g~~~~~~d~~~~~~l~~~-----~ 81 (155)
T 2g1u_A 16 KQKSKYIVIFGC--GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EF----SGFTVVGDAAEFETLKEC-----G 81 (155)
T ss_dssp -CCCCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TC----CSEEEESCTTSHHHHHTT-----T
T ss_pred ccCCCcEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cC----CCcEEEecCCCHHHHHHc-----C
Confidence 446678999987 555555554442 25689999999887654331 11 24456666532 22221 1
Q ss_pred CCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEE
Q 029803 94 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 94 ~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
...+|+|++.............+.+.+.+...++.
T Consensus 82 ~~~ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 82 MEKADMVFAFTNDDSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp GGGCSEEEECSSCHHHHHHHHHHHHHTSCCSEEEE
T ss_pred cccCCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEE
Confidence 24689998865443333333344455555556655
No 419
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=92.19 E-value=1.5 Score=33.72 Aligned_cols=93 Identities=12% Similarity=0.043 Sum_probs=59.7
Q ss_pred CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCCce
Q 029803 20 AKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGSF 97 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~ 97 (187)
.++++-+|+ |..+..+++.+...+.++.+|.+++.++ +++ ..+.++.||+.+ .+... .-...
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~v~vid~~~~~~~-~~~--------~~~~~i~gd~~~~~~L~~a-----~i~~a 178 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKK-VLR--------SGANFVHGDPTRVSDLEKA-----NVRGA 178 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCEEEEESCGGGHHH-HHH--------TTCEEEESCTTSHHHHHHT-----CSTTE
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCcEEEEeCChhhhh-HHh--------CCcEEEEeCCCCHHHHHhc-----Chhhc
Confidence 457888775 7888888877743333999999998876 543 237789999865 33332 23678
Q ss_pred eEEEEeCCCcccHHHHHHHHhccCCCeEEEE
Q 029803 98 DYAFVDADKDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 98 D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
|.+++........-..-...+.+.|+..++.
T Consensus 179 ~~vi~~~~~d~~n~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 179 RAVIVDLESDSETIHCILGIRKIDESVRIIA 209 (336)
T ss_dssp EEEEECCSSHHHHHHHHHHHHTTCTTSEEEE
T ss_pred cEEEEcCCccHHHHHHHHHHHHHCCCCeEEE
Confidence 9888865433222233344567778766665
No 420
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.15 E-value=0.4 Score=38.34 Aligned_cols=41 Identities=22% Similarity=0.209 Sum_probs=31.3
Q ss_pred CCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHH
Q 029803 19 NAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGL 61 (187)
Q Consensus 19 ~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~ 61 (187)
++.+|+-+|+| .|..++.++..+ +.+|+.+|.+++..+.++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~--Ga~V~v~D~~~~~~~~~~ 212 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSL--GAIVRAFDTRPEVKEQVQ 212 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCGGGHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHH
Confidence 57899999987 455566667666 468999999998777653
No 421
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=92.01 E-value=1.4 Score=27.66 Aligned_cols=72 Identities=15% Similarity=0.075 Sum_probs=44.3
Q ss_pred CCEEEEEcccccHHHHHHHhhCC-CC-CEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCC
Q 029803 20 AKKTIEIGVFTGYSLLLTALTIP-ED-GQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEG 95 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~la~~~~-~~-~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~ 95 (187)
.++|+-+|+ |..+..++..+. .+ .+|+.+|.+++..+... . ..+..+..|..+ .+... -.
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~----~~~~~~~~d~~~~~~~~~~------~~ 68 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R----MGVATKQVDAKDEAGLAKA------LG 68 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T----TTCEEEECCTTCHHHHHHH------TT
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h----CCCcEEEecCCCHHHHHHH------Hc
Confidence 467999988 666555554442 24 68999999887665443 1 235566666543 23333 25
Q ss_pred ceeEEEEeCCCc
Q 029803 96 SFDYAFVDADKD 107 (187)
Q Consensus 96 ~~D~i~~d~~~~ 107 (187)
.+|+|+......
T Consensus 69 ~~d~vi~~~~~~ 80 (118)
T 3ic5_A 69 GFDAVISAAPFF 80 (118)
T ss_dssp TCSEEEECSCGG
T ss_pred CCCEEEECCCch
Confidence 789998765433
No 422
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=92.00 E-value=2.4 Score=31.16 Aligned_cols=106 Identities=20% Similarity=0.249 Sum_probs=61.9
Q ss_pred cCCCEEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH--HHHHhhcc-cC
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-EN 93 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~-~~ 93 (187)
.+++++|-.|++.| .+..+++.+ ..+.+|+.++.+++.++...+.+ ..++.++.+|..+. ...+.+.- ..
T Consensus 6 l~gk~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (255)
T 4eso_A 6 YQGKKAIVIGGTHG-MGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAGQT 79 (255)
T ss_dssp TTTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHH
Confidence 46788888886544 444444443 23689999999988776665554 24688888886432 12111000 00
Q ss_pred CCceeEEEEeCCCc-----------cc-----------HHHHHHHHhccCCCeEEEEe
Q 029803 94 EGSFDYAFVDADKD-----------NY-----------CNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 94 ~~~~D~i~~d~~~~-----------~~-----------~~~~~~~~~~L~~gG~lv~~ 129 (187)
.+++|.++..+... .+ ....+.+.+.++++|.|+.-
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 137 (255)
T 4eso_A 80 LGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFT 137 (255)
T ss_dssp HSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 25799888764211 11 11345556777778877763
No 423
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=91.94 E-value=0.31 Score=35.99 Aligned_cols=87 Identities=17% Similarity=0.143 Sum_probs=52.2
Q ss_pred CEEEEEcccccHHHHHHHhhCCC-CC----EEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029803 21 KKTIEIGVFTGYSLLLTALTIPE-DG----QITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 95 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~la~~~~~-~~----~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 95 (187)
++|.-||+| ..+..++..+.. +. +|+.+|.+++.++...+.+ + +. ...+..+.+ .
T Consensus 3 ~~i~iIG~G--~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~---g----~~-~~~~~~e~~----------~ 62 (247)
T 3gt0_A 3 KQIGFIGCG--NMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY---G----LT-TTTDNNEVA----------K 62 (247)
T ss_dssp CCEEEECCS--HHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH---C----CE-ECSCHHHHH----------H
T ss_pred CeEEEECcc--HHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh---C----CE-EeCChHHHH----------H
Confidence 467788875 444444433311 22 8999999988776665433 3 22 123333332 3
Q ss_pred ceeEEEEeCCCcccHHHHHHHHhccCCCeEEE
Q 029803 96 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAV 127 (187)
Q Consensus 96 ~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv 127 (187)
..|+||+...+......++.+.+.++++.+++
T Consensus 63 ~aDvVilav~~~~~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 63 NADILILSIKPDLYASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp HCSEEEECSCTTTHHHHC---CCSSCTTCEEE
T ss_pred hCCEEEEEeCHHHHHHHHHHHHhhcCCCCEEE
Confidence 47999998766667777888878888887766
No 424
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=91.91 E-value=3.1 Score=31.32 Aligned_cols=83 Identities=17% Similarity=0.186 Sum_probs=47.6
Q ss_pred CCCEEEEEcccc-cHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcc-cC
Q 029803 19 NAKKTIEIGVFT-GYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYS-EN 93 (187)
Q Consensus 19 ~~~~vLeiG~g~-G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~-~~ 93 (187)
+++++|-.|++. ...+..+++.+ ..+.+|+.++.+++..+.+.+..+..+ .+.++.+|..+ .+..+.+.- ..
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG---VKLTVPCDVSDAESVDNMFKVLAEE 105 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT---CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467899988743 12333333332 136899999999877666666555544 35678888643 122211100 00
Q ss_pred CCceeEEEEeC
Q 029803 94 EGSFDYAFVDA 104 (187)
Q Consensus 94 ~~~~D~i~~d~ 104 (187)
.+++|.++..+
T Consensus 106 ~g~iD~lVnnA 116 (296)
T 3k31_A 106 WGSLDFVVHAV 116 (296)
T ss_dssp HSCCSEEEECC
T ss_pred cCCCCEEEECC
Confidence 25789988765
No 425
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=91.84 E-value=0.063 Score=41.48 Aligned_cols=93 Identities=17% Similarity=0.107 Sum_probs=58.9
Q ss_pred EEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeE
Q 029803 22 KTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDY 99 (187)
Q Consensus 22 ~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~ 99 (187)
+||-+|+ +.|..++.+++.. +.++++++.+++.++.+++ .+... ++. ..+........ .....+|+
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~----lGa~~---v~~--~~~~~~~~~~~-~~~~~~d~ 220 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKR--GYDVVASTGNREAADYLKQ----LGASE---VIS--REDVYDGTLKA-LSKQQWQG 220 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHH--TCCEEEEESSSSTHHHHHH----HTCSE---EEE--HHHHCSSCCCS-SCCCCEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCcE---EEE--CCCchHHHHHH-hhcCCccE
Confidence 8999996 5777888888875 4689999999888887764 24321 221 11110000000 01246998
Q ss_pred EEEeCCCcccHHHHHHHHhccCCCeEEEEeC
Q 029803 100 AFVDADKDNYCNYHERLMKLLKVGGIAVYDN 130 (187)
Q Consensus 100 i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
+|-.... ..++.+++.++++|.++.-.
T Consensus 221 vid~~g~----~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 221 AVDPVGG----KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp EEESCCT----HHHHHHHTTEEEEEEEEECC
T ss_pred EEECCcH----HHHHHHHHhhcCCCEEEEEe
Confidence 7754322 35788899999999998754
No 426
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=91.65 E-value=0.32 Score=38.35 Aligned_cols=76 Identities=16% Similarity=0.084 Sum_probs=46.5
Q ss_pred cCCCEEEEEccc---ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 18 VNAKKTIEIGVF---TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 18 ~~~~~vLeiG~g---~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
.++.+||-+|+| .|..++.+|+.. +.+|++++.+++..+.+++ .+...-+.....+..+.+..+.. .
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~~~~v~~~t~----~ 238 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKD--GIKLVNIVRKQEQADLLKA----QGAVHVCNAASPTFMQDLTEALV----S 238 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHH--TCCEEEEESSHHHHHHHHH----TTCSCEEETTSTTHHHHHHHHHH----H
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHh----CCCcEEEeCCChHHHHHHHHHhc----C
Confidence 678889998533 566677777765 5689999999988877764 45432222222333333333321 1
Q ss_pred CceeEEEEe
Q 029803 95 GSFDYAFVD 103 (187)
Q Consensus 95 ~~~D~i~~d 103 (187)
..+|+||-.
T Consensus 239 ~g~d~v~d~ 247 (379)
T 3iup_A 239 TGATIAFDA 247 (379)
T ss_dssp HCCCEEEES
T ss_pred CCceEEEEC
Confidence 469988743
No 427
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=91.51 E-value=0.3 Score=47.83 Aligned_cols=104 Identities=12% Similarity=0.011 Sum_probs=66.9
Q ss_pred HHcCCCEEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029803 16 RLVNAKKTIEIG--VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 93 (187)
Q Consensus 16 ~~~~~~~vLeiG--~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 93 (187)
+..++.+||-.| .|.|..++.+|+.. +++|++++.+++..+.+++.+...+... ++.....++...+... ..
T Consensus 1664 ~l~~Ge~VLI~gaaGgVG~aAiqlAk~~--Ga~Viat~~s~~k~~~l~~~~~~lga~~---v~~~~~~~~~~~i~~~-t~ 1737 (2512)
T 2vz8_A 1664 RMQPGESVLIHSGSGGVGQAAIAIALSR--GCRVFTTVGSAEKRAYLQARFPQLDETC---FANSRDTSFEQHVLRH-TA 1737 (2512)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTCCSTT---EEESSSSHHHHHHHHT-TT
T ss_pred cCCCCCEEEEEeCChHHHHHHHHHHHHc--CCEEEEEeCChhhhHHHHhhcCCCCceE---EecCCCHHHHHHHHHh-cC
Confidence 356788999987 46778888899875 5799999988887777776543233322 2222222222222211 11
Q ss_pred CCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEe
Q 029803 94 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 94 ~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+..+|+|+-.. ....++.+++.|+++|.++.-
T Consensus 1738 g~GvDvVld~~----g~~~l~~~l~~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1738 GKGVDLVLNSL----AEEKLQASVRCLAQHGRFLEI 1769 (2512)
T ss_dssp SCCEEEEEECC----CHHHHHHHHTTEEEEEEEEEC
T ss_pred CCCceEEEECC----CchHHHHHHHhcCCCcEEEEe
Confidence 34699887532 246788899999999998863
No 428
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=91.34 E-value=1.6 Score=34.22 Aligned_cols=96 Identities=7% Similarity=0.007 Sum_probs=59.5
Q ss_pred CCEEEEEcccccHHHHHHHhhCCC-CCEEEEEeCCcchHHHHHHHHHh------cCCCCcEEEEEcchHHHHHHHhhccc
Q 029803 20 AKKTIEIGVFTGYSLLLTALTIPE-DGQITAIDVNRETYEIGLPIIKK------AGVDHKINFIESEALSVLDQLLKYSE 92 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~------~~~~~~~~~~~~d~~~~~~~~~~~~~ 92 (187)
.++|.-||+ |.++..++..+.. +.+|+..|.+++.++..++.-.. ..++.++.+ ..|..+.+
T Consensus 29 ~mkI~VIGa--G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~-t~d~~ea~-------- 97 (356)
T 3k96_A 29 KHPIAILGA--GSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKA-YCDLKASL-------- 97 (356)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEE-ESCHHHHH--------
T ss_pred CCeEEEECc--cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEE-ECCHHHHH--------
Confidence 457899988 5555555544422 45799999998877766553111 111222333 23433321
Q ss_pred CCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEE
Q 029803 93 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 93 ~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
...|+|++..........++.+.+.++++.+++.
T Consensus 98 --~~aDvVilaVp~~~~~~vl~~i~~~l~~~~ivvs 131 (356)
T 3k96_A 98 --EGVTDILIVVPSFAFHEVITRMKPLIDAKTRIAW 131 (356)
T ss_dssp --TTCCEEEECCCHHHHHHHHHHHGGGCCTTCEEEE
T ss_pred --hcCCEEEECCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 4689999976555667778888888998876654
No 429
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=91.29 E-value=2.5 Score=31.85 Aligned_cols=134 Identities=19% Similarity=0.286 Sum_probs=74.1
Q ss_pred cCCCEEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH------HHHHHhhc
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS------VLDQLLKY 90 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~------~~~~~~~~ 90 (187)
.+++.+|--|.+.| .+..+++.+ ..+++|+.+|.+++.++.+.+.+ + .+...+.+|..+ .+......
T Consensus 27 L~gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 100 (273)
T 4fgs_A 27 LNAKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---G--GGAVGIQADSANLAELDRLYEKVKAE 100 (273)
T ss_dssp TTTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C--TTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hCCCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---C--CCeEEEEecCCCHHHHHHHHHHHHHH
Confidence 57788898887666 333333333 23789999999988777665444 3 346677788632 22222111
Q ss_pred ccCCCceeEEEEeCCC-----------cccH-----------HHHHHHHhccCCCeEEEEeCCCCCccccCCCCCCCCCc
Q 029803 91 SENEGSFDYAFVDADK-----------DNYC-----------NYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHF 148 (187)
Q Consensus 91 ~~~~~~~D~i~~d~~~-----------~~~~-----------~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~ 148 (187)
.++.|.++..+.. +.+. ...+.+.+.|+.+|.||.-.. ..+....+.. ..+
T Consensus 101 ---~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS-~~~~~~~~~~---~~Y 173 (273)
T 4fgs_A 101 ---AGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGS-TAGSTGTPAF---SVY 173 (273)
T ss_dssp ---HSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECC-GGGGSCCTTC---HHH
T ss_pred ---cCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEee-hhhccCCCCc---hHH
Confidence 3689988866421 1111 234555688888887765322 2232222211 112
Q ss_pred ccchHHHHHHHHHHhhc
Q 029803 149 RGSSRQAILDLNRSLAD 165 (187)
Q Consensus 149 ~~~~~~~~~~~~~~l~~ 165 (187)
.. ...++..|-+.++.
T Consensus 174 ~a-sKaav~~ltr~lA~ 189 (273)
T 4fgs_A 174 AA-SKAALRSFARNWIL 189 (273)
T ss_dssp HH-HHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHHHHH
Confidence 22 44556777666654
No 430
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=91.01 E-value=2.9 Score=33.22 Aligned_cols=95 Identities=11% Similarity=0.139 Sum_probs=56.1
Q ss_pred EEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHH------------HhcCCCCcEEEEEcchHHHHHHHhh
Q 029803 22 KTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPII------------KKAGVDHKINFIESEALSVLDQLLK 89 (187)
Q Consensus 22 ~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~------------~~~~~~~~~~~~~~d~~~~~~~~~~ 89 (187)
+|.-||+ |+.+..++..+..+.+|+++|.+++.++..++.. .. . ..++.+ ..+..+.+
T Consensus 2 kI~VIG~--G~vG~~~A~~La~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~-~-~~~l~~-t~~~~~~~----- 71 (402)
T 1dlj_A 2 KIAVAGS--GYVGLSLGVLLSLQNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKS-K-QLSIKA-TLDSKAAY----- 71 (402)
T ss_dssp EEEEECC--SHHHHHHHHHHTTTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHH-S-CCCEEE-ESCHHHHH-----
T ss_pred EEEEECC--CHHHHHHHHHHhCCCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHh-c-cCcEEE-eCCHHHHh-----
Confidence 5667776 7777777766644568999999988766543221 00 0 112222 22332222
Q ss_pred cccCCCceeEEEEeCCCc-----------ccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 90 YSENEGSFDYAFVDADKD-----------NYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 90 ~~~~~~~~D~i~~d~~~~-----------~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
...|+||+..... .....++.+.+ ++++.+++.....
T Consensus 72 -----~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~ 119 (402)
T 1dlj_A 72 -----KEAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTI 119 (402)
T ss_dssp -----HHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCC
T ss_pred -----cCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCC
Confidence 3479998865333 25667777778 8888887763333
No 431
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=90.99 E-value=3.7 Score=30.44 Aligned_cols=106 Identities=19% Similarity=0.194 Sum_probs=61.8
Q ss_pred cCCCEEEEEcccccHHHHHHHhhC-CCCCEEEEEeCC------------cchHHHHHHHHHhcCCCCcEEEEEcchHHH-
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVN------------RETYEIGLPIIKKAGVDHKINFIESEALSV- 83 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~------------~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~- 83 (187)
.+++++|-.|++.| .+..+++.+ ..+.+|+.+|.+ .+.++.+.+.+...+ .++.++.+|..+.
T Consensus 8 l~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~ 84 (287)
T 3pxx_A 8 VQDKVVLVTGGARG-QGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--RKAYTAEVDVRDRA 84 (287)
T ss_dssp TTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--SCEEEEECCTTCHH
T ss_pred cCCCEEEEeCCCCh-HHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC--CceEEEEccCCCHH
Confidence 35678888887544 344444433 236899999986 455555555555443 4688888886431
Q ss_pred -----HHHHhhcccCCCceeEEEEeCCC---------cccH-----------HHHHHHHhccCCCeEEEEe
Q 029803 84 -----LDQLLKYSENEGSFDYAFVDADK---------DNYC-----------NYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 84 -----~~~~~~~~~~~~~~D~i~~d~~~---------~~~~-----------~~~~~~~~~L~~gG~lv~~ 129 (187)
+....+. .+++|.++..+.. +.+. ...+.+.+.++++|.|+.-
T Consensus 85 ~v~~~~~~~~~~---~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 85 AVSRELANAVAE---FGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp HHHHHHHHHHHH---HSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HHHHHHHHHHHH---cCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 2222111 2578998876421 1111 2345566778888877763
No 432
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=90.97 E-value=0.62 Score=35.17 Aligned_cols=88 Identities=8% Similarity=-0.008 Sum_probs=54.9
Q ss_pred CCEEEEEcccccHHHHHHHhhCCC-C---CEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029803 20 AKKTIEIGVFTGYSLLLTALTIPE-D---GQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 95 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~la~~~~~-~---~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 95 (187)
.++|.-||+| ..+..++..+.. + .+|+.+|.+++.++...+. .+ +.. ..+..+.+ .
T Consensus 3 ~~~I~iIG~G--~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~---~g----i~~-~~~~~~~~----------~ 62 (280)
T 3tri_A 3 TSNITFIGGG--NMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEK---CG----VHT-TQDNRQGA----------L 62 (280)
T ss_dssp CSCEEEESCS--HHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHT---TC----CEE-ESCHHHHH----------S
T ss_pred CCEEEEEccc--HHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHH---cC----CEE-eCChHHHH----------h
Confidence 3578888885 333333333211 2 2799999999877665543 23 222 23333321 4
Q ss_pred ceeEEEEeCCCcccHHHHHHHHhc-cCCCeEEE
Q 029803 96 SFDYAFVDADKDNYCNYHERLMKL-LKVGGIAV 127 (187)
Q Consensus 96 ~~D~i~~d~~~~~~~~~~~~~~~~-L~~gG~lv 127 (187)
..|+||+...+......++++.+. ++++.+++
T Consensus 63 ~aDvVilav~p~~~~~vl~~l~~~~l~~~~iii 95 (280)
T 3tri_A 63 NADVVVLAVKPHQIKMVCEELKDILSETKILVI 95 (280)
T ss_dssp SCSEEEECSCGGGHHHHHHHHHHHHHTTTCEEE
T ss_pred cCCeEEEEeCHHHHHHHHHHHHhhccCCCeEEE
Confidence 679999987666777888888877 87765655
No 433
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=90.94 E-value=3.6 Score=30.20 Aligned_cols=104 Identities=6% Similarity=-0.027 Sum_probs=62.1
Q ss_pred CCCEEEEEccc----ccH-HHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH------HHHHH
Q 029803 19 NAKKTIEIGVF----TGY-SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS------VLDQL 87 (187)
Q Consensus 19 ~~~~vLeiG~g----~G~-~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~------~~~~~ 87 (187)
+++++|-.|++ .|. .+..+++ .+.+|+.++.++...+.+.+..+..+- .++.++.+|..+ .+..+
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~ 81 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHE---AGARLIFTYAGERLEKSVHELAGTLDR-NDSIILPCDVTNDAEIETCFASI 81 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHH---TTCEEEEEESSGGGHHHHHHHHHTSSS-CCCEEEECCCSSSHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH---CCCEEEEecCchHHHHHHHHHHHhcCC-CCceEEeCCCCCHHHHHHHHHHH
Confidence 56789998865 332 2333333 267999999887776766666655442 258888888642 22222
Q ss_pred hhcccCCCceeEEEEeCCCc-----------ccH---------------HHHHHHHhccCCCeEEEEe
Q 029803 88 LKYSENEGSFDYAFVDADKD-----------NYC---------------NYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 88 ~~~~~~~~~~D~i~~d~~~~-----------~~~---------------~~~~~~~~~L~~gG~lv~~ 129 (187)
... .+++|.++..+... ... ...+.+.+.++++|.|+.-
T Consensus 82 ~~~---~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~i 146 (266)
T 3oig_A 82 KEQ---VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTL 146 (266)
T ss_dssp HHH---HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEE
T ss_pred HHH---hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEE
Confidence 111 25789888764211 001 1345566788888877763
No 434
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=90.71 E-value=0.96 Score=37.20 Aligned_cols=89 Identities=12% Similarity=0.106 Sum_probs=55.1
Q ss_pred HcCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029803 17 LVNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 95 (187)
Q Consensus 17 ~~~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 95 (187)
...+++|+-+|+| .|......++.. +.+|+++|.++...+.+++ .+. +. .+..+. + .
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~--Ga~Viv~d~~~~~~~~A~~----~Ga----~~--~~l~e~---l-------~ 328 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQ--GARVSVTEIDPINALQAMM----EGF----DV--VTVEEA---I-------G 328 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH----TTC----EE--CCHHHH---G-------G
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCC----EE--ecHHHH---H-------h
Confidence 3578899999985 344445555554 4699999999887665543 232 22 233222 1 4
Q ss_pred ceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEe
Q 029803 96 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 96 ~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
..|+|+......... -....+.|++||+++--
T Consensus 329 ~aDvVi~atgt~~~i--~~~~l~~mk~ggilvnv 360 (494)
T 3ce6_A 329 DADIVVTATGNKDII--MLEHIKAMKDHAILGNI 360 (494)
T ss_dssp GCSEEEECSSSSCSB--CHHHHHHSCTTCEEEEC
T ss_pred CCCEEEECCCCHHHH--HHHHHHhcCCCcEEEEe
Confidence 689888764322211 12556789999998763
No 435
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=90.58 E-value=3.4 Score=33.44 Aligned_cols=99 Identities=16% Similarity=0.174 Sum_probs=58.9
Q ss_pred CEEEEEcccccHHHHHHHhhCCC-CCEEEEEeCCcchHHHHHHHHHhcCC------------CCcEEEEEcchHHHHHHH
Q 029803 21 KKTIEIGVFTGYSLLLTALTIPE-DGQITAIDVNRETYEIGLPIIKKAGV------------DHKINFIESEALSVLDQL 87 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~~~------------~~~~~~~~~d~~~~~~~~ 87 (187)
++|.-||+ |+.+..+|..+.. +.+|+++|.+++.++..++....... ..++++ ..|..+.+
T Consensus 3 mkI~VIG~--G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea~--- 76 (450)
T 3gg2_A 3 LDIAVVGI--GYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQAV--- 76 (450)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHHG---
T ss_pred CEEEEECc--CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHHH---
Confidence 46778877 5665555554422 56899999999877766542100000 112332 23333221
Q ss_pred hhcccCCCceeEEEEeCCCc----------ccHHHHHHHHhccCCCeEEEEeCCC
Q 029803 88 LKYSENEGSFDYAFVDADKD----------NYCNYHERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 88 ~~~~~~~~~~D~i~~d~~~~----------~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
...|+||+..... .....++.+.+.+++|.+++.....
T Consensus 77 -------~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv 124 (450)
T 3gg2_A 77 -------PEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTV 124 (450)
T ss_dssp -------GGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCC
T ss_pred -------hcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeC
Confidence 4579999875333 4556778888889998877765444
No 436
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=90.57 E-value=5 Score=31.17 Aligned_cols=120 Identities=13% Similarity=0.078 Sum_probs=69.9
Q ss_pred HHHHHHHHHc-CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcC-------------------
Q 029803 9 QLMAMLLRLV-NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG------------------- 68 (187)
Q Consensus 9 ~ll~~l~~~~-~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~------------------- 68 (187)
.++..++... +...|+-+|||.-.....+.....++.+++=+|. |+.++.=++.+...+
T Consensus 79 ~~v~~fl~~~~~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~ 157 (334)
T 3iei_A 79 QLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDG 157 (334)
T ss_dssp HHHHHHHHHTTTCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCT
T ss_pred HHHHHHHHhCCCCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhccccccccccccc
Confidence 4455555544 5678999999887776666653212567888887 666655444444311
Q ss_pred ---CCCcEEEEEcchHH--HHHHHhh-cccCCCceeEEEEeC-----CCcccHHHHHHHHhccCCCeEEEEe
Q 029803 69 ---VDHKINFIESEALS--VLDQLLK-YSENEGSFDYAFVDA-----DKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 69 ---~~~~~~~~~~d~~~--~~~~~~~-~~~~~~~~D~i~~d~-----~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
...+.+++..|..+ .+...+. .+......-++++.+ ..+....+++.+.....++..++++
T Consensus 158 ~~l~s~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~~~~~i~yE 229 (334)
T 3iei_A 158 HILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFERAMFINYE 229 (334)
T ss_dssp TEEECSSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSSEEEEEEE
T ss_pred ccCCCCceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCCCceEEEEe
Confidence 14578899999855 3433221 111123334555554 2344566777777777666666554
No 437
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=90.34 E-value=2.9 Score=31.92 Aligned_cols=82 Identities=11% Similarity=0.165 Sum_probs=54.6
Q ss_pred CCCEEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH------HHHHHhhcc
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS------VLDQLLKYS 91 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~------~~~~~~~~~ 91 (187)
.+++||-.|++.| .+..+++.+ ..+.+|+.++.+++.++.+.+.+...+...++.++.+|..+ .+......
T Consensus 7 ~~k~vlVTGas~g-IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~- 84 (319)
T 3ioy_A 7 AGRTAFVTGGANG-VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR- 84 (319)
T ss_dssp TTCEEEEETTTST-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred CCCEEEEcCCchH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh-
Confidence 5678888887544 444444444 23689999999998888887777765544478889988743 12222111
Q ss_pred cCCCceeEEEEeC
Q 029803 92 ENEGSFDYAFVDA 104 (187)
Q Consensus 92 ~~~~~~D~i~~d~ 104 (187)
.+++|+++..+
T Consensus 85 --~g~id~lv~nA 95 (319)
T 3ioy_A 85 --FGPVSILCNNA 95 (319)
T ss_dssp --TCCEEEEEECC
T ss_pred --CCCCCEEEECC
Confidence 35789998775
No 438
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=90.33 E-value=2.1 Score=32.62 Aligned_cols=61 Identities=10% Similarity=0.089 Sum_probs=39.9
Q ss_pred cCCCEEEEEccc-ccHHH-HHHHhhCCCCCEEEEEeCCc------------------chHHHHHHHHHhcCCCCcEEEEE
Q 029803 18 VNAKKTIEIGVF-TGYSL-LLTALTIPEDGQITAIDVNR------------------ETYEIGLPIIKKAGVDHKINFIE 77 (187)
Q Consensus 18 ~~~~~vLeiG~g-~G~~~-~~la~~~~~~~~v~~iD~~~------------------~~~~~a~~~~~~~~~~~~~~~~~ 77 (187)
.+..+|+-+|+| .|... .+|+.. . -++++.+|.+. ...+.+++.+...+-.-+++.+.
T Consensus 34 L~~~~VlVvGaGGlGs~va~~La~a-G-VG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~ 111 (292)
T 3h8v_A 34 IRTFAVAIVGVGGVGSVTAEMLTRC-G-IGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN 111 (292)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHH-T-CSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HhCCeEEEECcCHHHHHHHHHHHHc-C-CCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence 356799999997 34433 334443 2 47999999766 56677778887766444566666
Q ss_pred cch
Q 029803 78 SEA 80 (187)
Q Consensus 78 ~d~ 80 (187)
.+.
T Consensus 112 ~~l 114 (292)
T 3h8v_A 112 YNI 114 (292)
T ss_dssp CCT
T ss_pred ccC
Confidence 544
No 439
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=90.28 E-value=4.6 Score=30.31 Aligned_cols=105 Identities=13% Similarity=0.191 Sum_probs=60.9
Q ss_pred CCCEEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcc-hHHHHHHHHHhcCCCCcEEEEEcchHHH------HHHHhhc
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRE-TYEIGLPIIKKAGVDHKINFIESEALSV------LDQLLKY 90 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~~ 90 (187)
+++++|-.|++.| .+..+++.+ ..+.+|+.++.+++ ..+...+.++..+ .++.++.+|..+. +......
T Consensus 46 ~gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 46 KGKNVLITGGDSG-IGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG--VKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT--CCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4578888886544 444444443 23679999998765 3444444444433 4688898887431 2222111
Q ss_pred ccCCCceeEEEEeCCC----c--------cc-----------HHHHHHHHhccCCCeEEEEe
Q 029803 91 SENEGSFDYAFVDADK----D--------NY-----------CNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 91 ~~~~~~~D~i~~d~~~----~--------~~-----------~~~~~~~~~~L~~gG~lv~~ 129 (187)
.+++|.++..+.. . .+ ....+.+.+.++++|.|+.-
T Consensus 123 ---~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i 181 (291)
T 3ijr_A 123 ---LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT 181 (291)
T ss_dssp ---HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred ---cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence 2578998876421 0 01 12455566788888877763
No 440
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=90.05 E-value=3.4 Score=30.57 Aligned_cols=81 Identities=12% Similarity=0.128 Sum_probs=46.3
Q ss_pred cCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCc-------------------chHHHHHHHHHhcCCCCcEEEEE
Q 029803 18 VNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNR-------------------ETYEIGLPIIKKAGVDHKINFIE 77 (187)
Q Consensus 18 ~~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~-------------------~~~~~a~~~~~~~~~~~~~~~~~ 77 (187)
.+..+|+-+|+| .|...+..+.... -++++.+|.+. ...+.+.+++...+..-+++.+.
T Consensus 26 l~~~~VlvvG~GglG~~va~~La~~G-vg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 104 (251)
T 1zud_1 26 LLDSQVLIIGLGGLGTPAALYLAGAG-VGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ 104 (251)
T ss_dssp HHTCEEEEECCSTTHHHHHHHHHHTT-CSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HhcCcEEEEccCHHHHHHHHHHHHcC-CCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence 356799999997 4543333333323 46899998754 34566666666654333455555
Q ss_pred cchH-HHHHHHhhcccCCCceeEEEEeCC
Q 029803 78 SEAL-SVLDQLLKYSENEGSFDYAFVDAD 105 (187)
Q Consensus 78 ~d~~-~~~~~~~~~~~~~~~~D~i~~d~~ 105 (187)
.... +.+..+. ..+|+|+...+
T Consensus 105 ~~~~~~~~~~~~------~~~DvVi~~~d 127 (251)
T 1zud_1 105 QRLTGEALKDAV------ARADVVLDCTD 127 (251)
T ss_dssp SCCCHHHHHHHH------HHCSEEEECCS
T ss_pred ccCCHHHHHHHH------hcCCEEEECCC
Confidence 4332 2233332 46898886443
No 441
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=90.00 E-value=0.58 Score=35.03 Aligned_cols=89 Identities=16% Similarity=0.181 Sum_probs=52.4
Q ss_pred CEEEEEcccccHHHHHHHhhCCC-CC--EEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC-c
Q 029803 21 KKTIEIGVFTGYSLLLTALTIPE-DG--QITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG-S 96 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~la~~~~~-~~--~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~ 96 (187)
++|.-||+| ..+..++..+.. +. +|+++|.+++..+.++ ..+... . ...+..+. -. .
T Consensus 2 ~~I~iIG~G--~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~----~~g~~~--~-~~~~~~~~----------~~~~ 62 (281)
T 2g5c_A 2 QNVLIVGVG--FMGGSFAKSLRRSGFKGKIYGYDINPESISKAV----DLGIID--E-GTTSIAKV----------EDFS 62 (281)
T ss_dssp CEEEEESCS--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH----HTTSCS--E-EESCGGGG----------GGTC
T ss_pred cEEEEEecC--HHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH----HCCCcc--c-ccCCHHHH----------hcCC
Confidence 367788874 444444443321 23 7999999988766544 234321 1 12232221 14 6
Q ss_pred eeEEEEeCCCcccHHHHHHHHhccCCCeEEEE
Q 029803 97 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 97 ~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
.|+|++..........++.+.+.++++.+++.
T Consensus 63 aDvVilavp~~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 63 PDFVMLSSPVRTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCEEEEcCCHHHHHHHHHHHHhhCCCCcEEEE
Confidence 89999876555556677777778888876554
No 442
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=89.86 E-value=2 Score=33.08 Aligned_cols=98 Identities=9% Similarity=0.061 Sum_probs=57.7
Q ss_pred CCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHh----cCCCCcEE--EEEcchHHHHHHHhhccc
Q 029803 20 AKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKK----AGVDHKIN--FIESEALSVLDQLLKYSE 92 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~----~~~~~~~~--~~~~d~~~~~~~~~~~~~ 92 (187)
..+|.-||+| ..+..++..+. .+.+|+.+|.+++.++..++.... .+...... ....+..+. +
T Consensus 4 ~mki~iiG~G--~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----- 73 (359)
T 1bg6_A 4 SKTYAVLGLG--NGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLA---V----- 73 (359)
T ss_dssp CCEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHH---H-----
T ss_pred cCeEEEECCC--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHH---H-----
Confidence 3689999985 44444443331 156899999998877665543100 00000000 122233221 1
Q ss_pred CCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEe
Q 029803 93 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 93 ~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
..+|+|++..........++.+.+.++++..++..
T Consensus 74 --~~~D~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 74 --KDADVILIVVPAIHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp --TTCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred --hcCCEEEEeCCchHHHHHHHHHHHhCCCCCEEEEc
Confidence 46899999766656677888888889998876653
No 443
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=89.60 E-value=0.44 Score=41.59 Aligned_cols=98 Identities=9% Similarity=0.048 Sum_probs=59.7
Q ss_pred HHcCCCEEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029803 16 RLVNAKKTIEIG--VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 93 (187)
Q Consensus 16 ~~~~~~~vLeiG--~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 93 (187)
+..++++||-.| .|.|..++.+|+.. +.+|++++.++ ..+..+ .+...-+.....+..+.+... ..
T Consensus 342 ~l~~G~~VLI~gaaGgvG~~aiqlAk~~--Ga~V~~t~~~~-k~~~l~-----lga~~v~~~~~~~~~~~i~~~----t~ 409 (795)
T 3slk_A 342 GLRPGESLLVHSAAGGVGMAAIQLARHL--GAEVYATASED-KWQAVE-----LSREHLASSRTCDFEQQFLGA----TG 409 (795)
T ss_dssp CCCTTCCEEEESTTBHHHHHHHHHHHHT--TCCEEEECCGG-GGGGSC-----SCGGGEECSSSSTHHHHHHHH----SC
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHc--CCEEEEEeChH-Hhhhhh-----cChhheeecCChhHHHHHHHH----cC
Confidence 355778999998 46788999999986 46888888544 222211 232211111122333333332 12
Q ss_pred CCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEe
Q 029803 94 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 94 ~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+..+|+||-.... ..++.+++.|+++|.++.-
T Consensus 410 g~GvDvVld~~gg----~~~~~~l~~l~~~Gr~v~i 441 (795)
T 3slk_A 410 GRGVDVVLNSLAG----EFADASLRMLPRGGRFLEL 441 (795)
T ss_dssp SSCCSEEEECCCT----TTTHHHHTSCTTCEEEEEC
T ss_pred CCCeEEEEECCCc----HHHHHHHHHhcCCCEEEEe
Confidence 4579988764322 3457888999999999874
No 444
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=89.54 E-value=0.46 Score=37.02 Aligned_cols=103 Identities=15% Similarity=0.120 Sum_probs=54.6
Q ss_pred HHcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEE-EEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhccc
Q 029803 16 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQIT-AIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSE 92 (187)
Q Consensus 16 ~~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~-~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 92 (187)
+..++++||-+|+ +.|..++.+|+.. +.+++ .++.++...+ -.+.++..|.. .++..+-. ....+.....
T Consensus 164 ~~~~g~~VlV~Ga~G~vG~~aiqlak~~--Ga~vi~~~~~~~~~~~-~~~~~~~lGa~---~vi~~~~~-~~~~~~~~~~ 236 (357)
T 1zsy_A 164 QLQPGDSVIQNASNSGVGQAVIQIAAAL--GLRTINVVRDRPDIQK-LSDRLKSLGAE---HVITEEEL-RRPEMKNFFK 236 (357)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEECCCSCHHH-HHHHHHHTTCS---EEEEHHHH-HSGGGGGTTS
T ss_pred ccCCCCEEEEeCCcCHHHHHHHHHHHHc--CCEEEEEecCccchHH-HHHHHHhcCCc---EEEecCcc-hHHHHHHHHh
Confidence 3557789999996 5788888899875 45544 4555443211 12233445543 12221110 0111111000
Q ss_pred CCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEEe
Q 029803 93 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 93 ~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
....+|+||-... .. ....+++.|+++|.++.-
T Consensus 237 ~~~~~Dvvid~~g---~~-~~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 237 DMPQPRLALNCVG---GK-SSTELLRQLARGGTMVTY 269 (357)
T ss_dssp SSCCCSEEEESSC---HH-HHHHHHTTSCTTCEEEEC
T ss_pred CCCCceEEEECCC---cH-HHHHHHHhhCCCCEEEEE
Confidence 1125898764322 12 234578999999999874
No 445
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=89.40 E-value=3.1 Score=28.00 Aligned_cols=94 Identities=11% Similarity=-0.016 Sum_probs=49.7
Q ss_pred ccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEE-EEcchHHHHHHHhhcccCCCceeEEEEeCCC
Q 029803 28 VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINF-IESEALSVLDQLLKYSENEGSFDYAFVDADK 106 (187)
Q Consensus 28 ~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~ 106 (187)
.|.+++............+|..+|-++...+..++.+...+. ...+ ...+..+.+..+. ...+|+|++|...
T Consensus 9 ~~~~~~~~~~~~M~~~~~~ILivdd~~~~~~~l~~~L~~~~~--~~~v~~~~~~~~al~~l~-----~~~~dlvilD~~l 81 (164)
T 3t8y_A 9 HHSSGLVPRGSHMTDRVIRVLVVDDSAFMRMVLKDIIDSQPD--MKVVGFAKDGLEAVEKAI-----ELKPDVITMDIEM 81 (164)
T ss_dssp ---------------CCEEEEEECSCHHHHHHHHHHHHTSTT--EEEEEEESSHHHHHHHHH-----HHCCSEEEECSSC
T ss_pred cccCCcccCccccccCccEEEEEcCCHHHHHHHHHHHhcCCC--eEEEEecCCHHHHHHHhc-----cCCCCEEEEeCCC
Confidence 455555555555443356899999999999988888876542 1222 4556666555543 2479999999643
Q ss_pred c--ccHHHHHHHHhccCCCeEEEEe
Q 029803 107 D--NYCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 107 ~--~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
. ...++++.+.+. .+--++++.
T Consensus 82 ~~~~g~~l~~~lr~~-~~~~ii~~s 105 (164)
T 3t8y_A 82 PNLNGIEALKLIMKK-APTRVIMVS 105 (164)
T ss_dssp SSSCHHHHHHHHHHH-SCCEEEEEE
T ss_pred CCCCHHHHHHHHHhc-CCceEEEEe
Confidence 3 334555555443 334455554
No 446
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=89.09 E-value=1.5 Score=33.84 Aligned_cols=95 Identities=13% Similarity=0.030 Sum_probs=54.8
Q ss_pred CEEEEEcccccHHHHHHHhhCCC-C-------CEEEEEeCCcc-----hHHHHHHHHHhc----C--CCCcEEEEEcchH
Q 029803 21 KKTIEIGVFTGYSLLLTALTIPE-D-------GQITAIDVNRE-----TYEIGLPIIKKA----G--VDHKINFIESEAL 81 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~la~~~~~-~-------~~v~~iD~~~~-----~~~~a~~~~~~~----~--~~~~~~~~~~d~~ 81 (187)
++|.-||+|. .+..++..+.. + .+|+.+|.+++ ..+..++..... + +..++.. ..+..
T Consensus 9 mkI~iIG~G~--mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~ 85 (354)
T 1x0v_A 9 KKVCIVGSGN--WGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVA-VPDVV 85 (354)
T ss_dssp EEEEEECCSH--HHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEE-ESSHH
T ss_pred CeEEEECCCH--HHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEE-EcCHH
Confidence 5799999863 33333333211 3 57999999887 555444321000 0 1112332 23332
Q ss_pred HHHHHHhhcccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEE
Q 029803 82 SVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 82 ~~~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
+. . ...|+||+..........++.+.+.++++.+++.
T Consensus 86 ~~---~-------~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~ 122 (354)
T 1x0v_A 86 QA---A-------EDADILIFVVPHQFIGKICDQLKGHLKANATGIS 122 (354)
T ss_dssp HH---H-------TTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEE
T ss_pred HH---H-------cCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEE
Confidence 22 1 4689999977666667788888888888876654
No 447
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=89.00 E-value=1.9 Score=35.05 Aligned_cols=70 Identities=19% Similarity=0.143 Sum_probs=50.0
Q ss_pred CCEEEEEcccccHHHHHHHhhCCC-CCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCCc
Q 029803 20 AKKTIEIGVFTGYSLLLTALTIPE-DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGS 96 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~ 96 (187)
.++|+-+|+ |..+..+|+.+.. +..|+.+|.+++.++.+.+.+ .+..++||+.+ .+.+. .-+.
T Consensus 3 ~M~iiI~G~--G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~A-----gi~~ 68 (461)
T 4g65_A 3 AMKIIILGA--GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEA-----GAQD 68 (461)
T ss_dssp CEEEEEECC--SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHH-----TTTT
T ss_pred cCEEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhc-----CCCc
Confidence 467888666 7777888887743 567999999999887766553 26788999864 45443 2367
Q ss_pred eeEEEEe
Q 029803 97 FDYAFVD 103 (187)
Q Consensus 97 ~D~i~~d 103 (187)
.|+++.-
T Consensus 69 ad~~ia~ 75 (461)
T 4g65_A 69 ADMLVAV 75 (461)
T ss_dssp CSEEEEC
T ss_pred CCEEEEE
Confidence 8988764
No 448
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=88.92 E-value=2.2 Score=31.56 Aligned_cols=82 Identities=10% Similarity=0.020 Sum_probs=52.8
Q ss_pred CCCEEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCC
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEG 95 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~ 95 (187)
+++++|-.|++ |..+..+++.+ ..+.+|+.++.+++..+...+.+...+....+..+.+|..+ .+..+.+. .+
T Consensus 9 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~g 84 (267)
T 3t4x_A 9 KGKTALVTGST-AGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK---YP 84 (267)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH---CC
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh---cC
Confidence 46778877764 44444444443 23689999999988887777776655434567788888743 22333222 36
Q ss_pred ceeEEEEeC
Q 029803 96 SFDYAFVDA 104 (187)
Q Consensus 96 ~~D~i~~d~ 104 (187)
+.|.++..+
T Consensus 85 ~id~lv~nA 93 (267)
T 3t4x_A 85 KVDILINNL 93 (267)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 799988764
No 449
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=88.83 E-value=2.7 Score=32.78 Aligned_cols=89 Identities=11% Similarity=0.113 Sum_probs=51.0
Q ss_pred cCCCEEEEEccc-ccHHHHH-HHhhCCCCCEEEEEeCCc-------------------chHHHHHHHHHhcCCCCcEEEE
Q 029803 18 VNAKKTIEIGVF-TGYSLLL-TALTIPEDGQITAIDVNR-------------------ETYEIGLPIIKKAGVDHKINFI 76 (187)
Q Consensus 18 ~~~~~vLeiG~g-~G~~~~~-la~~~~~~~~v~~iD~~~-------------------~~~~~a~~~~~~~~~~~~~~~~ 76 (187)
.+..+|+-+||| .|...+. ++.. . -++++.+|.+. ...+.+.+++...+-.-+++.+
T Consensus 34 L~~~~VlivG~GGlG~~ia~~La~~-G-vg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~ 111 (346)
T 1y8q_A 34 LRASRVLLVGLKGLGAEIAKNLILA-G-VKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVD 111 (346)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHHH-T-CSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEE
T ss_pred HhCCeEEEECCCHHHHHHHHHHHHc-C-CCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEE
Confidence 356799999985 3332222 3222 2 46999998643 2456677777775544456777
Q ss_pred EcchHHHHHHHhhcccCCCceeEEEEeCCCcccHHHHH
Q 029803 77 ESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHE 114 (187)
Q Consensus 77 ~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~~~~~~~~~ 114 (187)
..+..+....+. ..||+|+...+.......+.
T Consensus 112 ~~~~~~~~~~~~------~~~dvVv~~~d~~~~r~~ln 143 (346)
T 1y8q_A 112 TEDIEKKPESFF------TQFDAVCLTCCSRDVIVKVD 143 (346)
T ss_dssp CSCGGGCCHHHH------TTCSEEEEESCCHHHHHHHH
T ss_pred ecccCcchHHHh------cCCCEEEEcCCCHHHHHHHH
Confidence 666533222232 57999987654433333333
No 450
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=88.80 E-value=5.4 Score=29.06 Aligned_cols=83 Identities=11% Similarity=0.079 Sum_probs=51.0
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC--CCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcc-cC
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIP--EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYS-EN 93 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~--~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~-~~ 93 (187)
+.++||-.| |+|..+..+++.+. .+.+|+.++.+++..+...+.+...+ .++.++.+|..+ .+..+.+.- ..
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHHh
Confidence 456777666 45666666666552 26799999998877776666665543 357888888643 122211100 00
Q ss_pred CCceeEEEEeC
Q 029803 94 EGSFDYAFVDA 104 (187)
Q Consensus 94 ~~~~D~i~~d~ 104 (187)
.+++|.++..+
T Consensus 80 ~g~id~li~~A 90 (276)
T 1wma_A 80 YGGLDVLVNNA 90 (276)
T ss_dssp HSSEEEEEECC
T ss_pred cCCCCEEEECC
Confidence 24799988764
No 451
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=88.77 E-value=0.89 Score=34.91 Aligned_cols=96 Identities=6% Similarity=-0.053 Sum_probs=54.7
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEE-----EEcchHHHHHHHhhcc
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINF-----IESEALSVLDQLLKYS 91 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~-----~~~d~~~~~~~~~~~~ 91 (187)
....+|.-||+| .++..++..+. .+..|+.+ .+++.++..++.-...... ...+ ...+.. .
T Consensus 17 ~~~~kI~IiGaG--a~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~-~~~~~~~~~~~~~~~----~----- 83 (318)
T 3hwr_A 17 FQGMKVAIMGAG--AVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQ-SFDEQVKVSASSDPS----A----- 83 (318)
T ss_dssp ---CEEEEESCS--HHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECS-SCEEEECCEEESCGG----G-----
T ss_pred ccCCcEEEECcC--HHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcC-CCcEEEeeeeeCCHH----H-----
Confidence 356789999885 33333333331 14588888 8877776665431000000 0111 111221 1
Q ss_pred cCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEE
Q 029803 92 ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 92 ~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
-..+|+|++..........++.+.+.++++.+++.
T Consensus 84 --~~~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~ 118 (318)
T 3hwr_A 84 --VQGADLVLFCVKSTDTQSAALAMKPALAKSALVLS 118 (318)
T ss_dssp --GTTCSEEEECCCGGGHHHHHHHHTTTSCTTCEEEE
T ss_pred --cCCCCEEEEEcccccHHHHHHHHHHhcCCCCEEEE
Confidence 15789999977666777888888889999887664
No 452
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=88.74 E-value=1.8 Score=32.68 Aligned_cols=34 Identities=9% Similarity=0.099 Sum_probs=26.5
Q ss_pred CceeEEEEeCCCcccHHHHHHHHhccCCCeEEEE
Q 029803 95 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 95 ~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
..+|+||+..........++.+.+.++++..++.
T Consensus 82 ~~~D~vil~vk~~~~~~v~~~i~~~l~~~~~iv~ 115 (317)
T 2qyt_A 82 GTVDYILFCTKDYDMERGVAEIRPMIGQNTKILP 115 (317)
T ss_dssp CCEEEEEECCSSSCHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCCEEEEecCcccHHHHHHHHHhhcCCCCEEEE
Confidence 5799999987666677788888888888776654
No 453
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=88.62 E-value=4.5 Score=31.95 Aligned_cols=85 Identities=13% Similarity=0.192 Sum_probs=55.3
Q ss_pred HHcCCCEEEEEcccccHHHHHHHhhCC-CC-CEEEEEeCCcchHHHHHHHHHhc-CC-CCcEEEEEcchHHH--HHHHhh
Q 029803 16 RLVNAKKTIEIGVFTGYSLLLTALTIP-ED-GQITAIDVNRETYEIGLPIIKKA-GV-DHKINFIESEALSV--LDQLLK 89 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~la~~~~-~~-~~v~~iD~~~~~~~~a~~~~~~~-~~-~~~~~~~~~d~~~~--~~~~~~ 89 (187)
...++++||-.|+ +|+.+..+++.+- .+ .+|++++.++.......+.+... +. ...++++.+|..+. +..+..
T Consensus 31 ~~~~~k~vLVTGa-tG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~ 109 (399)
T 3nzo_A 31 SVVSQSRFLVLGG-AGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKA 109 (399)
T ss_dssp HHHHTCEEEEETT-TSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHH
T ss_pred HHhCCCEEEEEcC-ChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHH
Confidence 3445788888774 5777777776653 24 59999999888776665555432 21 24688999987653 233221
Q ss_pred cccCCCceeEEEEeCC
Q 029803 90 YSENEGSFDYAFVDAD 105 (187)
Q Consensus 90 ~~~~~~~~D~i~~d~~ 105 (187)
...+|.||..+.
T Consensus 110 ----~~~~D~Vih~Aa 121 (399)
T 3nzo_A 110 ----DGQYDYVLNLSA 121 (399)
T ss_dssp ----CCCCSEEEECCC
T ss_pred ----hCCCCEEEECCC
Confidence 267999987653
No 454
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=88.47 E-value=5.9 Score=29.11 Aligned_cols=80 Identities=9% Similarity=0.100 Sum_probs=52.3
Q ss_pred cCCCEEEEEcc----cccH-HHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH------HHHH
Q 029803 18 VNAKKTIEIGV----FTGY-SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS------VLDQ 86 (187)
Q Consensus 18 ~~~~~vLeiG~----g~G~-~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~------~~~~ 86 (187)
.+++++|--|+ |.|. .+..|++ .+.+|+.++.+++..+.+.+.++..+- .++.++.+|..+ .+..
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~---~Ga~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~ 79 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQ---LGAKLVFTYRKERSRKELEKLLEQLNQ-PEAHLYQIDVQSDEEVINGFEQ 79 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHH---TTCEEEEEESSGGGHHHHHHHHGGGTC-SSCEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHH---CCCEEEEEECCHHHHHHHHHHHHhcCC-CcEEEEEccCCCHHHHHHHHHH
Confidence 36788999884 3443 3334444 278999999999988888888776553 357788888632 1222
Q ss_pred HhhcccCCCceeEEEEeC
Q 029803 87 LLKYSENEGSFDYAFVDA 104 (187)
Q Consensus 87 ~~~~~~~~~~~D~i~~d~ 104 (187)
.... .++.|.++...
T Consensus 80 ~~~~---~G~iD~lvnnA 94 (256)
T 4fs3_A 80 IGKD---VGNIDGVYHSI 94 (256)
T ss_dssp HHHH---HCCCSEEEECC
T ss_pred HHHH---hCCCCEEEecc
Confidence 2111 36899888653
No 455
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=88.31 E-value=6.2 Score=29.16 Aligned_cols=85 Identities=11% Similarity=0.038 Sum_probs=52.6
Q ss_pred CCCEEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH--HHHHhhcc-cCC
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-ENE 94 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~-~~~ 94 (187)
+.+++|-.|+ +|..+..+++.+ ..+.+|+.++.+++.++...+.+...+...++.++.+|..+. +..+.+.- ...
T Consensus 31 ~~k~vlVTGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 31 RDRLALVTGA-SGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 5677888775 455555555444 236799999998887777766666666555688888886432 22211100 002
Q ss_pred CceeEEEEeC
Q 029803 95 GSFDYAFVDA 104 (187)
Q Consensus 95 ~~~D~i~~d~ 104 (187)
+++|.++..+
T Consensus 110 g~iD~vi~~A 119 (279)
T 1xg5_A 110 SGVDICINNA 119 (279)
T ss_dssp CCCSEEEECC
T ss_pred CCCCEEEECC
Confidence 4789888764
No 456
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=88.19 E-value=4.6 Score=32.11 Aligned_cols=89 Identities=19% Similarity=0.053 Sum_probs=52.3
Q ss_pred CEEEEEcccccHHHHHHHhhCCCC----CEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCC
Q 029803 21 KKTIEIGVFTGYSLLLTALTIPED----GQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENE 94 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~la~~~~~~----~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~ 94 (187)
++|+-+|+ |+.+..++..+... .+|+.+|.+++..+...+.+...+ ..++..+..|+.+ .+..+.+.
T Consensus 2 ~kVlIiGa--GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~---- 74 (405)
T 4ina_A 2 AKVLQIGA--GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-YGEIDITTVDADSIEELVALINE---- 74 (405)
T ss_dssp CEEEEECC--SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHH----
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHh----
Confidence 47888988 45666666544222 389999999887776666655432 1347777777632 33443211
Q ss_pred CceeEEEEeCCCcccHHHHHHH
Q 029803 95 GSFDYAFVDADKDNYCNYHERL 116 (187)
Q Consensus 95 ~~~D~i~~d~~~~~~~~~~~~~ 116 (187)
...|+|+............+.+
T Consensus 75 ~~~DvVin~ag~~~~~~v~~a~ 96 (405)
T 4ina_A 75 VKPQIVLNIALPYQDLTIMEAC 96 (405)
T ss_dssp HCCSEEEECSCGGGHHHHHHHH
T ss_pred hCCCEEEECCCcccChHHHHHH
Confidence 2489888765443333344444
No 457
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=88.14 E-value=5.1 Score=29.72 Aligned_cols=81 Identities=12% Similarity=0.143 Sum_probs=53.9
Q ss_pred cCCCEEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH------HHHHHhhc
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS------VLDQLLKY 90 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~------~~~~~~~~ 90 (187)
.+++.+|--|.+.|- +..++..+ ..+++|+.+|.+++.++.+.+.++..+ .++..+.+|..+ .+....+.
T Consensus 5 L~gKvalVTGas~GI-G~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~ 81 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGI-GRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG--KEVLGVKADVSKKKDVEEFVRRTFET 81 (254)
T ss_dssp GTTCEEEEETTTSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHH-HHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 467888888876663 33333332 237899999999999988888887765 358888888642 12221111
Q ss_pred ccCCCceeEEEEeC
Q 029803 91 SENEGSFDYAFVDA 104 (187)
Q Consensus 91 ~~~~~~~D~i~~d~ 104 (187)
-++.|.++..+
T Consensus 82 ---~G~iDiLVNNA 92 (254)
T 4fn4_A 82 ---YSRIDVLCNNA 92 (254)
T ss_dssp ---HSCCCEEEECC
T ss_pred ---cCCCCEEEECC
Confidence 36899888664
No 458
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=88.03 E-value=7.2 Score=30.37 Aligned_cols=59 Identities=14% Similarity=0.058 Sum_probs=35.8
Q ss_pred CCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCc-------------------chHHHHHHHHHhcCCCCcEEEEEc
Q 029803 19 NAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNR-------------------ETYEIGLPIIKKAGVDHKINFIES 78 (187)
Q Consensus 19 ~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~-------------------~~~~~a~~~~~~~~~~~~~~~~~~ 78 (187)
+..+|+-+|+| .|...+..+.... -++++.+|.+. ...+.+++.+...+-.-+++.+..
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aG-Vg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~~ 111 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWG-VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKL 111 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTT-CCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEec
Confidence 56789999997 3433333333323 57999998754 345667777776553334555553
No 459
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=88.00 E-value=1.3 Score=35.80 Aligned_cols=107 Identities=16% Similarity=0.207 Sum_probs=56.1
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCC-CCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcc-----c
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPE-DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYS-----E 92 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----~ 92 (187)
.+.+.--||+ |+.+..+|..+.. +.+|+++|++++.++..++.. . .+..-...+.+......+ .
T Consensus 10 ~~~~~~ViGl--GyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~-----~---pi~epgl~~ll~~~~~~g~l~~tt 79 (431)
T 3ojo_A 10 HGSKLTVVGL--GYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQ-----I---SIEEPGLQEVYEEVLSSGKLKVST 79 (431)
T ss_dssp --CEEEEECC--STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTC-----C---SSCCTTHHHHHHHHHHTTCEEEES
T ss_pred cCCccEEEee--CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCC-----C---CcCCCCHHHHHHhhcccCceEEeC
Confidence 3455666666 5555555544422 568999999998877665420 0 011112222221100000 0
Q ss_pred CCCceeEEEEeCC-Cc-----------ccHHHHHHHHhccCCCeEEEEeCCCCCc
Q 029803 93 NEGSFDYAFVDAD-KD-----------NYCNYHERLMKLLKVGGIAVYDNTLWGG 135 (187)
Q Consensus 93 ~~~~~D~i~~d~~-~~-----------~~~~~~~~~~~~L~~gG~lv~~~~~~~~ 135 (187)
.....|+||+... +. ......+.+.+.|++|.+++...+...|
T Consensus 80 d~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pg 134 (431)
T 3ojo_A 80 TPEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPK 134 (431)
T ss_dssp SCCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTT
T ss_pred chhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChh
Confidence 0135788887632 21 1344556777899999888876555444
No 460
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=87.95 E-value=6.7 Score=29.12 Aligned_cols=81 Identities=11% Similarity=0.120 Sum_probs=53.4
Q ss_pred cCCCEEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH------HHHHHhhc
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS------VLDQLLKY 90 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~------~~~~~~~~ 90 (187)
.+++.+|--|.+.| .+..++..+ ..+++|+.+|.+++.++.+.+.+...+ .++..+.+|..+ .+.....
T Consensus 7 L~gKvalVTGas~G-IG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~- 82 (255)
T 4g81_D 7 LTGKTALVTGSARG-LGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTDELAIEAAFSKLDA- 82 (255)
T ss_dssp CTTCEEEETTCSSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHH-
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHH-
Confidence 36788888776655 333334333 237899999999998888887777665 357788888632 2222222
Q ss_pred ccCCCceeEEEEeC
Q 029803 91 SENEGSFDYAFVDA 104 (187)
Q Consensus 91 ~~~~~~~D~i~~d~ 104 (187)
..++.|.++..+
T Consensus 83 --~~G~iDiLVNNA 94 (255)
T 4g81_D 83 --EGIHVDILINNA 94 (255)
T ss_dssp --TTCCCCEEEECC
T ss_pred --HCCCCcEEEECC
Confidence 247899888764
No 461
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=87.91 E-value=9.8 Score=30.97 Aligned_cols=100 Identities=16% Similarity=0.137 Sum_probs=55.3
Q ss_pred CEEEEEcccc-cH-HHHHHHhhCCCCCEEEEEeCCcchHHHHHHH------------HHhcCCCCcEEEEEcchHHHHHH
Q 029803 21 KKTIEIGVFT-GY-SLLLTALTIPEDGQITAIDVNRETYEIGLPI------------IKKAGVDHKINFIESEALSVLDQ 86 (187)
Q Consensus 21 ~~vLeiG~g~-G~-~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~------------~~~~~~~~~~~~~~~d~~~~~~~ 86 (187)
.+|.-||+|. |. .+..+++..+ +.+|+++|.+++.++..++. +... ...++.+ ..|..+.+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~-g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~-~~~~l~~-t~~~~~~~-- 84 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCP-HITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAA-RGRNLFF-SSDIPKAI-- 84 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCT-TSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHH-BTTTEEE-ESCHHHHH--
T ss_pred CEEEEECCCHHHHHHHHHHHhcCC-CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHh-hcCCEEE-ECCHHHHh--
Confidence 5788998863 22 2333444321 46899999998877655431 0000 0112222 22332322
Q ss_pred HhhcccCCCceeEEEEeCC-Cc--------------ccHHHHHHHHhccCCCeEEEEeCCCC
Q 029803 87 LLKYSENEGSFDYAFVDAD-KD--------------NYCNYHERLMKLLKVGGIAVYDNTLW 133 (187)
Q Consensus 87 ~~~~~~~~~~~D~i~~d~~-~~--------------~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
...|+||+... +. .....++.+.+.+++|.+++...+..
T Consensus 85 --------~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~ 138 (481)
T 2o3j_A 85 --------AEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVP 138 (481)
T ss_dssp --------HHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCC
T ss_pred --------hcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 34799988642 21 14556777778899988777644443
No 462
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=87.79 E-value=4.4 Score=30.74 Aligned_cols=38 Identities=21% Similarity=0.132 Sum_probs=23.1
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC-CCC--EEEEEeCCcchHH
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIP-EDG--QITAIDVNRETYE 58 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~-~~~--~v~~iD~~~~~~~ 58 (187)
++.+|.-||+|. .+..++..+. .+. .|+.+|.+++.++
T Consensus 6 ~~mkI~IiGaG~--vG~~~a~~l~~~g~~~~V~l~d~~~~~~~ 46 (319)
T 1lld_A 6 KPTKLAVIGAGA--VGSTLAFAAAQRGIAREIVLEDIAKERVE 46 (319)
T ss_dssp -CCEEEEECCSH--HHHHHHHHHHHTTCCSEEEEECSSHHHHH
T ss_pred CCCEEEEECCCH--HHHHHHHHHHhCCCCCEEEEEeCChhHHH
Confidence 456899999854 3333332221 133 8999999886654
No 463
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=87.60 E-value=4.4 Score=30.57 Aligned_cols=89 Identities=7% Similarity=0.018 Sum_probs=50.2
Q ss_pred cCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 18 VNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 18 ~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
.++++|+-||+|. |......+..+ +.+|+.+|.+++..+.+. ..+ .+....+. +.++ -..
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~----~~g----~~~~~~~~---l~~~------l~~ 213 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAAL--GAKVKVGARESDLLARIA----EMG----MEPFHISK---AAQE------LRD 213 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HTT----SEEEEGGG---HHHH------TTT
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHH----HCC----CeecChhh---HHHH------hcC
Confidence 4678999999752 33333333433 469999999876544332 223 22222111 2222 257
Q ss_pred eeEEEEeCCCcccHHHHHHHHhccCCCeEEEE
Q 029803 97 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 97 ~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
.|+|+......... +...+.++++++++-
T Consensus 214 aDvVi~~~p~~~i~---~~~l~~mk~~~~lin 242 (293)
T 3d4o_A 214 VDVCINTIPALVVT---ANVLAEMPSHTFVID 242 (293)
T ss_dssp CSEEEECCSSCCBC---HHHHHHSCTTCEEEE
T ss_pred CCEEEECCChHHhC---HHHHHhcCCCCEEEE
Confidence 89999865432221 234567899887763
No 464
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=87.56 E-value=6.3 Score=32.26 Aligned_cols=95 Identities=14% Similarity=0.067 Sum_probs=57.0
Q ss_pred CEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeE
Q 029803 21 KKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDY 99 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~ 99 (187)
.+|--||+ |..+..++..+. .+.+|++.|.+++..+...+.- ....++. ...+..+....+ ...|+
T Consensus 5 ~kIgiIGl--G~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g---~~g~~i~-~~~s~~e~v~~l-------~~aDv 71 (484)
T 4gwg_A 5 ADIALIGL--AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANE---AKGTKVV-GAQSLKEMVSKL-------KKPRR 71 (484)
T ss_dssp BSEEEECC--SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTT---TTTSSCE-ECSSHHHHHHTB-------CSSCE
T ss_pred CEEEEECh--hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcc---cCCCcee-ccCCHHHHHhhc-------cCCCE
Confidence 46777776 555555554432 1568999999998766554321 0111121 123444444332 46799
Q ss_pred EEEeCCCc-ccHHHHHHHHhccCCCeEEEE
Q 029803 100 AFVDADKD-NYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 100 i~~d~~~~-~~~~~~~~~~~~L~~gG~lv~ 128 (187)
|++..... .....++.+.+.|++|.+++-
T Consensus 72 Vil~Vp~~~~v~~vl~~l~~~L~~g~iIId 101 (484)
T 4gwg_A 72 IILLVKAGQAVDDFIEKLVPLLDTGDIIID 101 (484)
T ss_dssp EEECSCSSHHHHHHHHHHGGGCCTTCEEEE
T ss_pred EEEecCChHHHHHHHHHHHHhcCCCCEEEE
Confidence 99876543 556778888899999877654
No 465
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=87.52 E-value=3.4 Score=33.51 Aligned_cols=85 Identities=16% Similarity=0.090 Sum_probs=58.4
Q ss_pred HHHHHHHHHHH-cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH--H
Q 029803 7 HGQLMAMLLRL-VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--V 83 (187)
Q Consensus 7 ~~~ll~~l~~~-~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~ 83 (187)
..+++..+-.. .+.++|+=+|. |..+..+|+.+....++..+|.+++..+...+.+ ++..+++||+.+ .
T Consensus 221 i~~~~~~~g~~~~~~~~v~I~Gg--G~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l------~~~~Vi~GD~td~~~ 292 (461)
T 4g65_A 221 IRSVMSELQRLEKPYRRIMIVGG--GNIGASLAKRLEQTYSVKLIERNLQRAEKLSEEL------ENTIVFCGDAADQEL 292 (461)
T ss_dssp HHHHHHHTTGGGSCCCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHC------TTSEEEESCTTCHHH
T ss_pred HHHHHHhhccccccccEEEEEcc--hHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHC------CCceEEeccccchhh
Confidence 34455544332 34578888775 6777788888877789999999998777766554 257899999976 3
Q ss_pred HHHHhhcccCCCceeEEEEeC
Q 029803 84 LDQLLKYSENEGSFDYAFVDA 104 (187)
Q Consensus 84 ~~~~~~~~~~~~~~D~i~~d~ 104 (187)
+.+- .-+..|+++.-.
T Consensus 293 L~ee-----~i~~~D~~ia~T 308 (461)
T 4g65_A 293 LTEE-----NIDQVDVFIALT 308 (461)
T ss_dssp HHHT-----TGGGCSEEEECC
T ss_pred Hhhc-----CchhhcEEEEcc
Confidence 4431 235789887753
No 466
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=87.11 E-value=6.6 Score=29.35 Aligned_cols=96 Identities=13% Similarity=0.058 Sum_probs=57.1
Q ss_pred CCEEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHhc---------CCC--------CcEEEEEcchH
Q 029803 20 AKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKA---------GVD--------HKINFIESEAL 81 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~---------~~~--------~~~~~~~~d~~ 81 (187)
.++|.-||+|. .+..+|..+ ..+.+|+.+|.+++.++.+++.+... +.. .+++. ..+..
T Consensus 4 ~~kV~VIGaG~--mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~ 80 (283)
T 4e12_A 4 ITNVTVLGTGV--LGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLA 80 (283)
T ss_dssp CCEEEEECCSH--HHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHH
T ss_pred CCEEEEECCCH--HHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHH
Confidence 46788888863 333333322 12579999999999888887664321 111 01222 22322
Q ss_pred HHHHHHhhcccCCCceeEEEEeCCCc--ccHHHHHHHHhccCCCeEEEE
Q 029803 82 SVLDQLLKYSENEGSFDYAFVDADKD--NYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 82 ~~~~~~~~~~~~~~~~D~i~~d~~~~--~~~~~~~~~~~~L~~gG~lv~ 128 (187)
+. -...|+|+...... .....++++.+.++++.+++-
T Consensus 81 ~~----------~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s 119 (283)
T 4e12_A 81 QA----------VKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFAT 119 (283)
T ss_dssp HH----------TTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred HH----------hccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEE
Confidence 21 15689999865433 445677888888998877653
No 467
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=86.96 E-value=7 Score=28.69 Aligned_cols=81 Identities=15% Similarity=0.097 Sum_probs=52.7
Q ss_pred cCCCEEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH------HHHHhhc
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV------LDQLLKY 90 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~~ 90 (187)
.+++++|-.|++.| .+..++..+ ..+.+|+.++.+++.++...+.+...+ .++.++.+|..+. +....+.
T Consensus 9 l~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 9 LTDKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETMKA 85 (264)
T ss_dssp TTTCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46788998887655 333333333 236899999999988887777776654 4688888886431 2222211
Q ss_pred ccCCCceeEEEEeC
Q 029803 91 SENEGSFDYAFVDA 104 (187)
Q Consensus 91 ~~~~~~~D~i~~d~ 104 (187)
.++.|.++..+
T Consensus 86 ---~g~id~lv~nA 96 (264)
T 3ucx_A 86 ---YGRVDVVINNA 96 (264)
T ss_dssp ---TSCCSEEEECC
T ss_pred ---cCCCcEEEECC
Confidence 35799988764
No 468
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=86.95 E-value=8.1 Score=28.98 Aligned_cols=81 Identities=14% Similarity=0.118 Sum_probs=47.4
Q ss_pred cCCCEEEEEccccc-HHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH------HHHHHhh
Q 029803 18 VNAKKTIEIGVFTG-YSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS------VLDQLLK 89 (187)
Q Consensus 18 ~~~~~vLeiG~g~G-~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~------~~~~~~~ 89 (187)
.+++++|-.|++.| ..+..+++.+ ..+.+|+.++.++...+.+++.....+ ++.++.+|..+ .+.....
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADAASIDAVFETLEK 105 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHH
Confidence 46788999986532 1223333222 126799999988765555555544433 47788888643 1222221
Q ss_pred cccCCCceeEEEEeC
Q 029803 90 YSENEGSFDYAFVDA 104 (187)
Q Consensus 90 ~~~~~~~~D~i~~d~ 104 (187)
. .+++|.++..+
T Consensus 106 ~---~g~iD~lVnnA 117 (293)
T 3grk_A 106 K---WGKLDFLVHAI 117 (293)
T ss_dssp H---TSCCSEEEECC
T ss_pred h---cCCCCEEEECC
Confidence 1 35799998765
No 469
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=86.93 E-value=3.5 Score=31.64 Aligned_cols=97 Identities=16% Similarity=0.135 Sum_probs=46.1
Q ss_pred CCCEEEEEcccccHHHHHHHhhC---CCCCEEEEEeCCcchHHHHHHHHHh-cCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTI---PEDGQITAIDVNRETYEIGLPIIKK-AGVDHKINFIESEALSVLDQLLKYSENE 94 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~---~~~~~v~~iD~~~~~~~~a~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (187)
++.+|.-||+| +.+..++..+ +...+++.+|++++.++-....+.. ..+...+++..++. ..+
T Consensus 6 ~~~KI~IiGaG--~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~----~a~------- 72 (318)
T 1y6j_A 6 SRSKVAIIGAG--FVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDY----SDV------- 72 (318)
T ss_dssp -CCCEEEECCS--HHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CG----GGG-------
T ss_pred CCCEEEEECCC--HHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCH----HHh-------
Confidence 45789999985 3333222222 1124899999998655421222221 11222344443331 122
Q ss_pred CceeEEEEeCCCcc----------------cHHHHHHHHhccCCCeEEEEe
Q 029803 95 GSFDYAFVDADKDN----------------YCNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 95 ~~~D~i~~d~~~~~----------------~~~~~~~~~~~L~~gG~lv~~ 129 (187)
...|+|++....+. ..+..+.+.+. .|+++++..
T Consensus 73 ~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~ 122 (318)
T 1y6j_A 73 KDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVV 122 (318)
T ss_dssp TTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEEC
T ss_pred CCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEe
Confidence 57899998653211 12233333333 689988873
No 470
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=86.73 E-value=8.1 Score=28.80 Aligned_cols=87 Identities=16% Similarity=0.039 Sum_probs=52.9
Q ss_pred CEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeE
Q 029803 21 KKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDY 99 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~ 99 (187)
++|.-||+ |..+..++..+. .+.+|+.+|.+++..+...+. + +. ...+..+.+ ...|+
T Consensus 2 ~~i~iIG~--G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~----g----~~-~~~~~~~~~----------~~aDv 60 (287)
T 3pef_A 2 QKFGFIGL--GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAAL----G----AE-RAATPCEVV----------ESCPV 60 (287)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT----T----CE-ECSSHHHHH----------HHCSE
T ss_pred CEEEEEee--cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC----C----Ce-ecCCHHHHH----------hcCCE
Confidence 46778887 555555544432 256899999999887765542 2 22 223433332 24699
Q ss_pred EEEeCC-CcccHHHH---HHHHhccCCCeEEEE
Q 029803 100 AFVDAD-KDNYCNYH---ERLMKLLKVGGIAVY 128 (187)
Q Consensus 100 i~~d~~-~~~~~~~~---~~~~~~L~~gG~lv~ 128 (187)
|++... .......+ +.+.+.+++|.+++-
T Consensus 61 vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~ 93 (287)
T 3pef_A 61 TFAMLADPAAAEEVCFGKHGVLEGIGEGRGYVD 93 (287)
T ss_dssp EEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEE
T ss_pred EEEEcCCHHHHHHHHcCcchHhhcCCCCCEEEe
Confidence 998654 23445555 666678888876654
No 471
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=86.66 E-value=2 Score=30.55 Aligned_cols=93 Identities=16% Similarity=0.129 Sum_probs=53.9
Q ss_pred CEEEEEcccccHHHHHHHhhCC--CCCEEEEEeCCcc-hHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCC
Q 029803 21 KKTIEIGVFTGYSLLLTALTIP--EDGQITAIDVNRE-TYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEG 95 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~la~~~~--~~~~v~~iD~~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~ 95 (187)
++||-.|+ +|..+..+++.+. .+.+|++++.+++ .++... .. ..+++++.+|..+ .+.... .
T Consensus 6 k~vlVtGa-sg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~~D~~d~~~~~~~~------~ 72 (221)
T 3r6d_A 6 XYITILGA-AGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID--HERVTVIEGSFQNPGXLEQAV------T 72 (221)
T ss_dssp SEEEEEST-TSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT--STTEEEEECCTTCHHHHHHHH------T
T ss_pred EEEEEEeC-CcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC--CCceEEEECCCCCHHHHHHHH------c
Confidence 45787774 4555555554442 3679999998876 433221 11 2468899999864 333332 5
Q ss_pred ceeEEEEeCCCcccHHHHHHHHhccCCC--eEEEE
Q 029803 96 SFDYAFVDADKDNYCNYHERLMKLLKVG--GIAVY 128 (187)
Q Consensus 96 ~~D~i~~d~~~~~~~~~~~~~~~~L~~g--G~lv~ 128 (187)
.+|.++......+.. .+.+.+.++.. |.+|.
T Consensus 73 ~~d~vv~~ag~~n~~--~~~~~~~~~~~~~~~iv~ 105 (221)
T 3r6d_A 73 NAEVVFVGAMESGSD--MASIVKALSRXNIRRVIG 105 (221)
T ss_dssp TCSEEEESCCCCHHH--HHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEcCCCCChh--HHHHHHHHHhcCCCeEEE
Confidence 689999876543333 45555544433 34543
No 472
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=86.56 E-value=7.6 Score=28.32 Aligned_cols=83 Identities=16% Similarity=0.045 Sum_probs=53.4
Q ss_pred cCCCEEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH--HHHHhhcc-cC
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-EN 93 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~-~~ 93 (187)
.+++++|-.|++.| .+..+++.+ ..+.+|+.++.+++.++.+.+.+...+ .++.++.+|..+. +..+.+.- ..
T Consensus 5 ~~~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 5 PRNATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAADAH 81 (252)
T ss_dssp CCSCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHHhh
Confidence 35678888887654 444444433 236799999999998888888777654 4688899887432 22221110 01
Q ss_pred CCceeEEEEeC
Q 029803 94 EGSFDYAFVDA 104 (187)
Q Consensus 94 ~~~~D~i~~d~ 104 (187)
+++|.++..+
T Consensus 82 -g~id~lv~nA 91 (252)
T 3h7a_A 82 -APLEVTIFNV 91 (252)
T ss_dssp -SCEEEEEECC
T ss_pred -CCceEEEECC
Confidence 5799888764
No 473
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=86.45 E-value=2.2 Score=32.71 Aligned_cols=89 Identities=13% Similarity=0.022 Sum_probs=53.4
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCC-C----CEEEEEeCCcc--hHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcc
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPE-D----GQITAIDVNRE--TYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYS 91 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~-~----~~v~~iD~~~~--~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 91 (187)
...+|.-||+| ..+..++..+.. + ..|+.+|.+++ .++..+ ..+ +.+ ..+..+..
T Consensus 21 ~~mkI~iIG~G--~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~----~~G----~~~-~~~~~e~~------- 82 (322)
T 2izz_A 21 QSMSVGFIGAG--QLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALR----KMG----VKL-TPHNKETV------- 82 (322)
T ss_dssp -CCCEEEESCS--HHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHH----HHT----CEE-ESCHHHHH-------
T ss_pred CCCEEEEECCC--HHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHH----HcC----CEE-eCChHHHh-------
Confidence 34578889985 444444433311 2 47999998875 444443 223 222 23433322
Q ss_pred cCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEE
Q 029803 92 ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 92 ~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
...|+||+...+......++.+.+.++++.+++.
T Consensus 83 ---~~aDvVilav~~~~~~~vl~~l~~~l~~~~ivvs 116 (322)
T 2izz_A 83 ---QHSDVLFLAVKPHIIPFILDEIGADIEDRHIVVS 116 (322)
T ss_dssp ---HHCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred ---ccCCEEEEEeCHHHHHHHHHHHHhhcCCCCEEEE
Confidence 3579999987666677778888788888776554
No 474
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=86.15 E-value=8.3 Score=32.58 Aligned_cols=60 Identities=13% Similarity=0.074 Sum_probs=37.3
Q ss_pred cCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCc-------------------chHHHHHHHHHhcCCCCcEEEEE
Q 029803 18 VNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNR-------------------ETYEIGLPIIKKAGVDHKINFIE 77 (187)
Q Consensus 18 ~~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~-------------------~~~~~a~~~~~~~~~~~~~~~~~ 77 (187)
.+..+|+-+||| .|...+..+.... -++++.+|.+. ...+.+++.+...+-.-+++.+.
T Consensus 324 L~~arVLIVGaGGLGs~vA~~La~aG-VG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~~ 402 (615)
T 4gsl_A 324 IKNTKVLLLGAGTLGCYVSRALIAWG-VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVK 402 (615)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHHTT-CCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEEC
T ss_pred HhCCeEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEee
Confidence 356789999997 3443333333333 57999999765 34566777777655444455555
Q ss_pred c
Q 029803 78 S 78 (187)
Q Consensus 78 ~ 78 (187)
.
T Consensus 403 ~ 403 (615)
T 4gsl_A 403 L 403 (615)
T ss_dssp C
T ss_pred c
Confidence 3
No 475
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=86.08 E-value=5.4 Score=29.76 Aligned_cols=89 Identities=17% Similarity=0.097 Sum_probs=51.7
Q ss_pred CCEEEEEcccccHHHHHHHhhCC---CCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 20 AKKTIEIGVFTGYSLLLTALTIP---EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~la~~~~---~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
.++|.-||+|. .+..++..+. .+.+|+++|.+++..+.+++ .+... ....+..+. -..
T Consensus 6 ~~~I~iIG~G~--mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g~~~---~~~~~~~~~----------~~~ 66 (290)
T 3b1f_A 6 EKTIYIAGLGL--IGASLALGIKRDHPHYKIVGYNRSDRSRDIALE----RGIVD---EATADFKVF----------AAL 66 (290)
T ss_dssp CCEEEEECCSH--HHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH----TTSCS---EEESCTTTT----------GGG
T ss_pred cceEEEEeeCH--HHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH----cCCcc---cccCCHHHh----------hcC
Confidence 46788899753 3333333221 14689999999877665443 23211 112222111 135
Q ss_pred eeEEEEeCCCcccHHHHHHHHhc-cCCCeEEE
Q 029803 97 FDYAFVDADKDNYCNYHERLMKL-LKVGGIAV 127 (187)
Q Consensus 97 ~D~i~~d~~~~~~~~~~~~~~~~-L~~gG~lv 127 (187)
.|+|++..........++.+.+. ++++.+++
T Consensus 67 aDvVilavp~~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 67 ADVIILAVPIKKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp CSEEEECSCHHHHHHHHHHHHTSCCCTTCEEE
T ss_pred CCEEEEcCCHHHHHHHHHHHHhcCCCCCCEEE
Confidence 79999876555556677777777 88776555
No 476
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=86.01 E-value=5.7 Score=29.10 Aligned_cols=80 Identities=15% Similarity=0.165 Sum_probs=51.1
Q ss_pred cCCCEEEEEcc-ccc--H-HHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH------HHHH
Q 029803 18 VNAKKTIEIGV-FTG--Y-SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV------LDQL 87 (187)
Q Consensus 18 ~~~~~vLeiG~-g~G--~-~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~------~~~~ 87 (187)
.+++++|-.|+ |.| . .+..+++ .+.+|+.++.+++..+...+.+...+ ..++.++.+|..+. +...
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~---~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALL---EGADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQT 95 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHH---CCCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHH
Confidence 35678888886 443 2 2233333 36899999999988887777776544 24689999887431 2222
Q ss_pred hhcccCCCceeEEEEeC
Q 029803 88 LKYSENEGSFDYAFVDA 104 (187)
Q Consensus 88 ~~~~~~~~~~D~i~~d~ 104 (187)
.+. .+++|.++..+
T Consensus 96 ~~~---~g~id~li~~A 109 (266)
T 3o38_A 96 VEK---AGRLDVLVNNA 109 (266)
T ss_dssp HHH---HSCCCEEEECC
T ss_pred HHH---hCCCcEEEECC
Confidence 111 25789998764
No 477
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=85.99 E-value=5.5 Score=29.57 Aligned_cols=85 Identities=14% Similarity=-0.106 Sum_probs=49.4
Q ss_pred EEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeEEE
Q 029803 22 KTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAF 101 (187)
Q Consensus 22 ~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~ 101 (187)
+|.-||+|. .+..++..+..+.+|+.+|.+++..+...+. +.. ... ..+ . -...|+|+
T Consensus 3 ~i~iiG~G~--~G~~~a~~l~~g~~V~~~~~~~~~~~~~~~~----g~~----~~~--~~~----~------~~~~D~vi 60 (289)
T 2cvz_A 3 KVAFIGLGA--MGYPMAGHLARRFPTLVWNRTFEKALRHQEE----FGS----EAV--PLE----R------VAEARVIF 60 (289)
T ss_dssp CEEEECCST--THHHHHHHHHTTSCEEEECSSTHHHHHHHHH----HCC----EEC--CGG----G------GGGCSEEE
T ss_pred eEEEEcccH--HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHC----CCc----ccC--HHH----H------HhCCCEEE
Confidence 577788763 3333333221145799999998876655443 221 111 111 1 14689999
Q ss_pred EeCCCc-ccHHHHHHHHhccCCCeEEEE
Q 029803 102 VDADKD-NYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 102 ~d~~~~-~~~~~~~~~~~~L~~gG~lv~ 128 (187)
+..... .....++.+.+.+++|.+++.
T Consensus 61 ~~v~~~~~~~~v~~~l~~~l~~~~~vv~ 88 (289)
T 2cvz_A 61 TCLPTTREVYEVAEALYPYLREGTYWVD 88 (289)
T ss_dssp ECCSSHHHHHHHHHHHTTTCCTTEEEEE
T ss_pred EeCCChHHHHHHHHHHHhhCCCCCEEEE
Confidence 876444 355567777788888876664
No 478
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=85.85 E-value=8.4 Score=28.11 Aligned_cols=82 Identities=11% Similarity=0.045 Sum_probs=49.7
Q ss_pred HcCCCEEEEEccc-ccHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH------HHHHHh
Q 029803 17 LVNAKKTIEIGVF-TGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS------VLDQLL 88 (187)
Q Consensus 17 ~~~~~~vLeiG~g-~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~------~~~~~~ 88 (187)
..++++||-.|++ +|..+..+++.+ ..+.+|+.++.++...+.+++.....+ .+.++.+|..+ .+..+.
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~ 87 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG---SELVFPCDVADDAQIDALFASLK 87 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC---CcEEEECCCCCHHHHHHHHHHHH
Confidence 3467889998864 244444444433 236799999988766666665555443 36778888643 222222
Q ss_pred hcccCCCceeEEEEeC
Q 029803 89 KYSENEGSFDYAFVDA 104 (187)
Q Consensus 89 ~~~~~~~~~D~i~~d~ 104 (187)
.. .+++|.++..+
T Consensus 88 ~~---~g~id~lv~nA 100 (271)
T 3ek2_A 88 TH---WDSLDGLVHSI 100 (271)
T ss_dssp HH---CSCEEEEEECC
T ss_pred HH---cCCCCEEEECC
Confidence 11 35899998764
No 479
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=85.66 E-value=1.2 Score=33.55 Aligned_cols=38 Identities=21% Similarity=0.362 Sum_probs=25.7
Q ss_pred CceeEEEEeCC----CcccHHH----------HHHHHhccCCCeEEEEeCCC
Q 029803 95 GSFDYAFVDAD----KDNYCNY----------HERLMKLLKVGGIAVYDNTL 132 (187)
Q Consensus 95 ~~~D~i~~d~~----~~~~~~~----------~~~~~~~L~~gG~lv~~~~~ 132 (187)
++||+||++.. ..+|+.- -..+..+|+|||.+++...-
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYG 261 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYG 261 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECC
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeec
Confidence 79999999953 2234332 22335899999999986444
No 480
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=85.61 E-value=8.2 Score=27.81 Aligned_cols=80 Identities=13% Similarity=0.068 Sum_probs=52.0
Q ss_pred CCCEEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHH------HHHHHhhcc
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS------VLDQLLKYS 91 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~------~~~~~~~~~ 91 (187)
+++++|-.|++ |..+..+++.+ ..+.+|+.++.+++..+...+.+...+ .++.++.+|..+ .+.....
T Consensus 4 ~~k~vlITGas-~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~-- 78 (247)
T 3lyl_A 4 NEKVALVTGAS-RGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKA-- 78 (247)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHH--
Confidence 46778877754 44444444443 236799999999988887777776654 358888888743 2222221
Q ss_pred cCCCceeEEEEeC
Q 029803 92 ENEGSFDYAFVDA 104 (187)
Q Consensus 92 ~~~~~~D~i~~d~ 104 (187)
..+++|.++..+
T Consensus 79 -~~~~id~li~~A 90 (247)
T 3lyl_A 79 -ENLAIDILVNNA 90 (247)
T ss_dssp -TTCCCSEEEECC
T ss_pred -HcCCCCEEEECC
Confidence 145789988764
No 481
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=85.59 E-value=8.8 Score=28.11 Aligned_cols=87 Identities=17% Similarity=0.126 Sum_probs=49.1
Q ss_pred cCCCEEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH--HHHHhhcc-cC
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-EN 93 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~-~~ 93 (187)
.+++++|-.|+. |..+..+++.+ ..+.+|+.++.+++..+...+.+.......++.++.+|..+. +..+.+.- ..
T Consensus 5 ~~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 5 VNGKVALVTGAA-QGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH 83 (267)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCC-CcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 356788888864 44455555444 236799999998876655554443221123588888886432 22211000 00
Q ss_pred CCceeEEEEeCC
Q 029803 94 EGSFDYAFVDAD 105 (187)
Q Consensus 94 ~~~~D~i~~d~~ 105 (187)
.+++|.++..+.
T Consensus 84 ~g~id~lv~~Ag 95 (267)
T 2gdz_A 84 FGRLDILVNNAG 95 (267)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 257899887653
No 482
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=85.58 E-value=5.8 Score=29.48 Aligned_cols=82 Identities=15% Similarity=0.168 Sum_probs=50.3
Q ss_pred HcCCCEEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH------HHHHhh
Q 029803 17 LVNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV------LDQLLK 89 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~ 89 (187)
+.+++++|-.|++.| .+..+++.+ ..+.+|+.++.+++.++...+.+...+ .++.++.+|..+. +.....
T Consensus 21 m~~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (279)
T 3sju_A 21 MSRPQTAFVTGVSSG-IGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVE 97 (279)
T ss_dssp ----CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 446778888886544 444444433 236899999999888877777776544 4588888887431 222211
Q ss_pred cccCCCceeEEEEeC
Q 029803 90 YSENEGSFDYAFVDA 104 (187)
Q Consensus 90 ~~~~~~~~D~i~~d~ 104 (187)
. .++.|.++..+
T Consensus 98 ~---~g~id~lv~nA 109 (279)
T 3sju_A 98 R---FGPIGILVNSA 109 (279)
T ss_dssp H---HCSCCEEEECC
T ss_pred H---cCCCcEEEECC
Confidence 1 25789988764
No 483
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=85.55 E-value=7.7 Score=29.28 Aligned_cols=89 Identities=7% Similarity=0.076 Sum_probs=50.7
Q ss_pred cCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 18 VNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 18 ~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
.++++|+-||+|. |......+... +.+|+.+|.+++..+.+. ..+ .+.+..+. +.++ -..
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~d~~~~~~~~~~----~~g----~~~~~~~~---l~~~------l~~ 215 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAAL--GANVKVGARSSAHLARIT----EMG----LVPFHTDE---LKEH------VKD 215 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HTT----CEEEEGGG---HHHH------STT
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHH----HCC----CeEEchhh---HHHH------hhC
Confidence 4678999999852 33333333433 569999999876544332 223 22222221 2232 257
Q ss_pred eeEEEEeCCCcccHHHHHHHHhccCCCeEEEE
Q 029803 97 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 97 ~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
.|+|+......... +...+.++++++++=
T Consensus 216 aDvVi~~~p~~~i~---~~~~~~mk~g~~lin 244 (300)
T 2rir_A 216 IDICINTIPSMILN---QTVLSSMTPKTLILD 244 (300)
T ss_dssp CSEEEECCSSCCBC---HHHHTTSCTTCEEEE
T ss_pred CCEEEECCChhhhC---HHHHHhCCCCCEEEE
Confidence 89999865432221 235678999887653
No 484
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=85.41 E-value=8.9 Score=28.05 Aligned_cols=84 Identities=12% Similarity=0.101 Sum_probs=48.9
Q ss_pred cCCCEEEEEcccccHHHHHHHhhC-CCCCEEEEE-eCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH--HHHHhhcc-c
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAI-DVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-E 92 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~i-D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~-~ 92 (187)
.+++++|-.|++.| .+..+++.+ ..+.+|+.+ +.+++..+...+.+...+ .++.++.+|..+. +..+.+.- .
T Consensus 6 l~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (259)
T 3edm_A 6 FTNRTIVVAGAGRD-IGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG--RSALAIKADLTNAAEVEAAISAAAD 82 (259)
T ss_dssp TTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT--SCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHH
Confidence 35678888887654 344444433 236788887 667766666666665544 4578888886431 22211100 0
Q ss_pred CCCceeEEEEeC
Q 029803 93 NEGSFDYAFVDA 104 (187)
Q Consensus 93 ~~~~~D~i~~d~ 104 (187)
..++.|.++..+
T Consensus 83 ~~g~id~lv~nA 94 (259)
T 3edm_A 83 KFGEIHGLVHVA 94 (259)
T ss_dssp HHCSEEEEEECC
T ss_pred HhCCCCEEEECC
Confidence 025799988764
No 485
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=85.39 E-value=2.2 Score=28.34 Aligned_cols=68 Identities=16% Similarity=0.249 Sum_probs=47.8
Q ss_pred CCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCCcc--cHHHHHHHH
Q 029803 43 EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLM 117 (187)
Q Consensus 43 ~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~~d~~~~~--~~~~~~~~~ 117 (187)
++.+|..+|-++......+..++..|+.. + ....+..+.+..+. ..+||+|++|..-+. -.++++++.
T Consensus 11 k~~rILiVDD~~~~r~~l~~~L~~~G~~~-v-~~a~~g~~al~~~~-----~~~~DlillD~~MP~mdG~el~~~ir 80 (134)
T 3to5_A 11 KNMKILIVDDFSTMRRIVKNLLRDLGFNN-T-QEADDGLTALPMLK-----KGDFDFVVTDWNMPGMQGIDLLKNIR 80 (134)
T ss_dssp TTCCEEEECSCHHHHHHHHHHHHHTTCCC-E-EEESSHHHHHHHHH-----HHCCSEEEEESCCSSSCHHHHHHHHH
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHHcCCcE-E-EEECCHHHHHHHHH-----hCCCCEEEEcCCCCCCCHHHHHHHHH
Confidence 36789999999999999999999888642 2 34456666555442 258999999975443 345556554
No 486
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=85.23 E-value=10 Score=29.26 Aligned_cols=91 Identities=8% Similarity=0.012 Sum_probs=50.3
Q ss_pred CCCEEEEEccc-ccHHHHHHHhhCCCCCEEE-EEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029803 19 NAKKTIEIGVF-TGYSLLLTALTIPEDGQIT-AIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 96 (187)
Q Consensus 19 ~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~-~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (187)
+..+|.-|||| .|..-+......+++.+++ .+|.+++..+.+.+.+ + + ....|..+.+.. ..
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~---~----~-~~~~~~~~ll~~--------~~ 75 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERT---G----A-RGHASLTDMLAQ--------TD 75 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHH---C----C-EEESCHHHHHHH--------CC
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHc---C----C-ceeCCHHHHhcC--------CC
Confidence 44689999998 4543333333332366766 5799887665554433 3 2 234566666543 57
Q ss_pred eeEEEEeCCCcccHHHHHHHHhccCCCeEEEE
Q 029803 97 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 97 ~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
.|+|++.......... +...|+.|--+++
T Consensus 76 ~D~V~i~tp~~~h~~~---~~~al~~gk~v~~ 104 (354)
T 3q2i_A 76 ADIVILTTPSGLHPTQ---SIECSEAGFHVMT 104 (354)
T ss_dssp CSEEEECSCGGGHHHH---HHHHHHTTCEEEE
T ss_pred CCEEEECCCcHHHHHH---HHHHHHCCCCEEE
Confidence 8999986433332222 2334444444444
No 487
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=85.14 E-value=14 Score=29.94 Aligned_cols=93 Identities=18% Similarity=0.164 Sum_probs=55.0
Q ss_pred CEEEEEcccc-cH-HHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhc-------C------C-CCcEEEEEcchHHHH
Q 029803 21 KKTIEIGVFT-GY-SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA-------G------V-DHKINFIESEALSVL 84 (187)
Q Consensus 21 ~~vLeiG~g~-G~-~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-------~------~-~~~~~~~~~d~~~~~ 84 (187)
++|.-||+|. |. .+..++. .+..|+.+|.+++.++.+++.+... + . .....+ ..+. +
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~---~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~-~-- 110 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFAR---VGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSST-K-- 110 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHT---TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCG-G--
T ss_pred CEEEEECcCHHHHHHHHHHHh---CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCH-H--
Confidence 4688999875 32 2222332 2568999999999888776643210 1 0 111222 3343 2
Q ss_pred HHHhhcccCCCceeEEEEeCCCc--ccHHHHHHHHhccCCCeEEEE
Q 029803 85 DQLLKYSENEGSFDYAFVDADKD--NYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~i~~d~~~~--~~~~~~~~~~~~L~~gG~lv~ 128 (187)
.+ ...|+|+...... .....++.+.+.++++.+|+.
T Consensus 111 -~~-------~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 111 -EL-------STVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp -GG-------TTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred -HH-------CCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 12 5689999865322 124577778888888877764
No 488
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=85.13 E-value=7.1 Score=28.69 Aligned_cols=82 Identities=10% Similarity=0.039 Sum_probs=51.1
Q ss_pred CCCEEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH------HHHHhhcc
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV------LDQLLKYS 91 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~~~ 91 (187)
+++++|-.|++.| .+..+++.+ ..+.+|+.++.+++.++.+.+.+....-..++.++.+|..+. +......
T Consensus 7 ~~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~- 84 (265)
T 3lf2_A 7 SEAVAVVTGGSSG-IGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT- 84 (265)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH-
Confidence 5678888887654 344444433 236799999999988877777766522223588888886431 2222111
Q ss_pred cCCCceeEEEEeC
Q 029803 92 ENEGSFDYAFVDA 104 (187)
Q Consensus 92 ~~~~~~D~i~~d~ 104 (187)
.++.|.++..+
T Consensus 85 --~g~id~lvnnA 95 (265)
T 3lf2_A 85 --LGCASILVNNA 95 (265)
T ss_dssp --HCSCSEEEECC
T ss_pred --cCCCCEEEECC
Confidence 25789888764
No 489
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=85.10 E-value=6 Score=28.86 Aligned_cols=83 Identities=12% Similarity=0.087 Sum_probs=51.7
Q ss_pred cCCCEEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHhcCCC-CcEEEEEcchHH------HHHHHhh
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVD-HKINFIESEALS------VLDQLLK 89 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~------~~~~~~~ 89 (187)
.+++++|-.|++.| .+..+++.+ ..+.+|+.++.+++.++...+.+...... .++.++.+|..+ .+.....
T Consensus 5 ~~~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (250)
T 3nyw_A 5 KQKGLAIITGASQG-IGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ 83 (250)
T ss_dssp CCCCEEEEESTTSH-HHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence 35678888886544 334444333 12679999999998888777777654322 457888888643 1222211
Q ss_pred cccCCCceeEEEEeC
Q 029803 90 YSENEGSFDYAFVDA 104 (187)
Q Consensus 90 ~~~~~~~~D~i~~d~ 104 (187)
. .++.|.++..+
T Consensus 84 ~---~g~iD~lvnnA 95 (250)
T 3nyw_A 84 K---YGAVDILVNAA 95 (250)
T ss_dssp H---HCCEEEEEECC
T ss_pred h---cCCCCEEEECC
Confidence 1 25799988764
No 490
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=85.03 E-value=6.5 Score=31.54 Aligned_cols=76 Identities=18% Similarity=0.165 Sum_probs=44.4
Q ss_pred CCCEEEEEcccc-cHHHHHHHhhCCCCCEEE-EEeCCcchHHHHHHHHHhcCCCCcEEEEEc---chHHHHHHHhhcccC
Q 029803 19 NAKKTIEIGVFT-GYSLLLTALTIPEDGQIT-AIDVNRETYEIGLPIIKKAGVDHKINFIES---EALSVLDQLLKYSEN 93 (187)
Q Consensus 19 ~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~-~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~---d~~~~~~~~~~~~~~ 93 (187)
++.+|.-||||. |..-+......+ +.+++ .+|.+++..+.+.+.+...+++. ...+.+ |..+.+.
T Consensus 19 ~~~rvgiIG~G~~g~~h~~~l~~~~-~~~lvav~d~~~~~~~~~a~~~~~~g~~~-~~~~~~~~~~~~~ll~-------- 88 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQTHVENMARRD-DVEIVAFADPDPYMVGRAQEILKKNGKKP-AKVFGNGNDDYKNMLK-------- 88 (444)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCT-TEEEEEEECSCHHHHHHHHHHHHHTTCCC-CEEECSSTTTHHHHTT--------
T ss_pred CCceEEEEecCHHHHHHHHHHHhCC-CcEEEEEEeCCHHHHHHHHHHHHhcCCCC-CceeccCCCCHHHHhc--------
Confidence 456899999872 332222233333 56665 56999888777766665555431 334432 4444332
Q ss_pred CCceeEEEEeC
Q 029803 94 EGSFDYAFVDA 104 (187)
Q Consensus 94 ~~~~D~i~~d~ 104 (187)
....|+|++..
T Consensus 89 ~~~vD~V~i~t 99 (444)
T 2ixa_A 89 DKNIDAVFVSS 99 (444)
T ss_dssp CTTCCEEEECC
T ss_pred CCCCCEEEEcC
Confidence 35799998864
No 491
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=85.00 E-value=9 Score=27.72 Aligned_cols=83 Identities=18% Similarity=0.106 Sum_probs=52.0
Q ss_pred CCCEEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHH--HHHHhhcc-cCC
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-ENE 94 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~-~~~ 94 (187)
+++++|-.|+.. ..+..+++.+ ..+.+|+.++.+++..+...+.+...+ .++.++.+|..+. +..+.+.- ...
T Consensus 8 ~~k~vlITGas~-giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 8 ENKVGIVTGSGG-GIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 567888888654 4444444444 236799999999988887777776543 4688888887532 22211100 002
Q ss_pred CceeEEEEeC
Q 029803 95 GSFDYAFVDA 104 (187)
Q Consensus 95 ~~~D~i~~d~ 104 (187)
+++|.++..+
T Consensus 85 g~id~li~~A 94 (253)
T 3qiv_A 85 GGIDYLVNNA 94 (253)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 4799998765
No 492
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=84.99 E-value=10 Score=28.37 Aligned_cols=105 Identities=14% Similarity=0.135 Sum_probs=60.5
Q ss_pred CCCEEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCc--chHHHHHHHHHhcCCCCcEEEEEcchHHH------HHHHhh
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNR--ETYEIGLPIIKKAGVDHKINFIESEALSV------LDQLLK 89 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~--~~~~~a~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~ 89 (187)
+++++|-.|++. ..+..+++.+ ..+.+|+.++.+. +..+...+.++..+ .++.++.+|..+. +.....
T Consensus 48 ~~k~vlVTGas~-GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 48 KDRKALVTGGDS-GIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG--RKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT--CCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 457888888654 4444444444 2367899988763 34455555555544 4588888886431 222211
Q ss_pred cccCCCceeEEEEeCCCc---c---------c-----------HHHHHHHHhccCCCeEEEEe
Q 029803 90 YSENEGSFDYAFVDADKD---N---------Y-----------CNYHERLMKLLKVGGIAVYD 129 (187)
Q Consensus 90 ~~~~~~~~D~i~~d~~~~---~---------~-----------~~~~~~~~~~L~~gG~lv~~ 129 (187)
. .++.|.++..+... . + ....+.+.+.++++|.|+.-
T Consensus 125 ~---~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~i 184 (294)
T 3r3s_A 125 A---LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITT 184 (294)
T ss_dssp H---HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred H---cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEE
Confidence 1 25789988764310 0 0 12345566788888877763
No 493
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=84.92 E-value=5 Score=35.95 Aligned_cols=77 Identities=8% Similarity=-0.089 Sum_probs=52.7
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCC--EEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcc-----
Q 029803 19 NAKKTIEIGVFTGYSLLLTALTIPEDG--QITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYS----- 91 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~la~~~~~~~--~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----- 91 (187)
+..+++|+.||.|..++-+..+ +. .+.++|+++.+.+.-+.|+. ...++.+|+.++.......+
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~A---G~~~vv~avEid~~A~~ty~~N~p------~~~~~~~DI~~l~~~~~~~di~~~~ 609 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQA---GISDTLWAIEMWDPAAQAFRLNNP------GSTVFTEDCNILLKLVMAGETTNSR 609 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHH---TSEEEEEEECSSHHHHHHHHHHCT------TSEEECSCHHHHHHHHHHTCSBCTT
T ss_pred CCCeEEEeccCccHHHHHHHHC---CCCceEEEEECCHHHHHHHHHhCC------CCccccccHHHHhhhccchhhhhhh
Confidence 3447999999999999888765 43 57799999998888777752 35678888876543211000
Q ss_pred ----cCCCceeEEEEeC
Q 029803 92 ----ENEGSFDYAFVDA 104 (187)
Q Consensus 92 ----~~~~~~D~i~~d~ 104 (187)
...+.+|+|+...
T Consensus 610 ~~~lp~~~~vDll~GGp 626 (1002)
T 3swr_A 610 GQRLPQKGDVEMLCGGP 626 (1002)
T ss_dssp CCBCCCTTTCSEEEECC
T ss_pred hhhcccCCCeeEEEEcC
Confidence 0124689888653
No 494
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=84.86 E-value=6.6 Score=29.85 Aligned_cols=94 Identities=13% Similarity=0.125 Sum_probs=46.7
Q ss_pred EEEEEcccccHHHHHHHhhCCCCC--EEEEEeCCcchHHHHHHHHHh-cCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029803 22 KTIEIGVFTGYSLLLTALTIPEDG--QITAIDVNRETYEIGLPIIKK-AGVDHKINFIESEALSVLDQLLKYSENEGSFD 98 (187)
Q Consensus 22 ~vLeiG~g~G~~~~~la~~~~~~~--~v~~iD~~~~~~~~a~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 98 (187)
+|.-||+|.=..++....... +. .|+.+|++++.++.....+.. .......++...+. ..+ ...|
T Consensus 2 kI~VIGaG~vG~~la~~la~~-g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~----~a~-------~~aD 69 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLR-GSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGH----SEL-------ADAQ 69 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECG----GGG-------TTCS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCH----HHh-------CCCC
Confidence 577888864333322222212 33 899999998765432222221 11112233333332 122 5689
Q ss_pred EEEEeCCCcc----------------cHHHHHHHHhccCCCeEEEE
Q 029803 99 YAFVDADKDN----------------YCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 99 ~i~~d~~~~~----------------~~~~~~~~~~~L~~gG~lv~ 128 (187)
+|++...... ....++.+.+. .|++++++
T Consensus 70 vVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~ 114 (304)
T 2v6b_A 70 VVILTAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLV 114 (304)
T ss_dssp EEEECC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEE
T ss_pred EEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 9998753211 13344555555 68998765
No 495
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=84.77 E-value=6 Score=28.55 Aligned_cols=82 Identities=12% Similarity=0.044 Sum_probs=50.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcch--H------HHHHHHh
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA--L------SVLDQLL 88 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~--~------~~~~~~~ 88 (187)
.+++++|-.|++ |..+..+++.+ ..+.+|+.++.+++.++...+.+...+.. ...++..|. . .....+.
T Consensus 12 l~~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~d~d~~~~~~~~~~~~~~~ 89 (247)
T 3i1j_A 12 LKGRVILVTGAA-RGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQP-QPLIIALNLENATAQQYRELAARVE 89 (247)
T ss_dssp TTTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSC-CCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCC-CceEEEeccccCCHHHHHHHHHHHH
Confidence 356778877765 44445555444 23679999999998888888877765532 456666554 1 1222221
Q ss_pred hcccCCCceeEEEEeC
Q 029803 89 KYSENEGSFDYAFVDA 104 (187)
Q Consensus 89 ~~~~~~~~~D~i~~d~ 104 (187)
.. .+++|.++..+
T Consensus 90 ~~---~g~id~lv~nA 102 (247)
T 3i1j_A 90 HE---FGRLDGLLHNA 102 (247)
T ss_dssp HH---HSCCSEEEECC
T ss_pred Hh---CCCCCEEEECC
Confidence 11 25789988764
No 496
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=84.73 E-value=3.9 Score=30.69 Aligned_cols=94 Identities=10% Similarity=-0.028 Sum_probs=53.7
Q ss_pred CEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEE--------cchHHHHHHHhhcc
Q 029803 21 KKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE--------SEALSVLDQLLKYS 91 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~--------~d~~~~~~~~~~~~ 91 (187)
.+|.-||+| ..+..++..+. .+.+|+.+|.+++.++..++. +. .... .++.+. ....
T Consensus 4 m~i~iiG~G--~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~----g~----~~~~~~~~~~~~~~~~~~-~~~~--- 69 (316)
T 2ew2_A 4 MKIAIAGAG--AMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKN----GL----IADFNGEEVVANLPIFSP-EEID--- 69 (316)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH----CE----EEEETTEEEEECCCEECG-GGCC---
T ss_pred CeEEEECcC--HHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhC----CE----EEEeCCCeeEecceeecc-hhhc---
Confidence 478889885 44444444331 146899999998776655543 21 1110 000000 0110
Q ss_pred cCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEE
Q 029803 92 ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 92 ~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
..-..+|+||+..........++.+.+.++++.+++.
T Consensus 70 ~~~~~~d~vi~~v~~~~~~~v~~~l~~~l~~~~~iv~ 106 (316)
T 2ew2_A 70 HQNEQVDLIIALTKAQQLDAMFKAIQPMITEKTYVLC 106 (316)
T ss_dssp TTSCCCSEEEECSCHHHHHHHHHHHGGGCCTTCEEEE
T ss_pred ccCCCCCEEEEEeccccHHHHHHHHHHhcCCCCEEEE
Confidence 0012789999976555566777778888888877665
No 497
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=84.70 E-value=6.3 Score=28.74 Aligned_cols=82 Identities=12% Similarity=0.076 Sum_probs=50.3
Q ss_pred cCCCEEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHhcCCCCcEEEEEcch--H--H----HHHHHh
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA--L--S----VLDQLL 88 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~--~--~----~~~~~~ 88 (187)
.+++++|-.|++.| .+..+++.+ ..+.+|+.++.+++.++...+.+...+. .++.++..|. . + .+....
T Consensus 10 l~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (252)
T 3f1l_A 10 LNDRIILVTGASDG-IGREAAMTYARYGATVILLGRNEEKLRQVASHINEETG-RQPQWFILDLLTCTSENCQQLAQRIA 87 (252)
T ss_dssp TTTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-CCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CCceEEEEecccCCHHHHHHHHHHHH
Confidence 35678888886544 444444433 2368999999998888777766655432 2467777776 2 1 222222
Q ss_pred hcccCCCceeEEEEeC
Q 029803 89 KYSENEGSFDYAFVDA 104 (187)
Q Consensus 89 ~~~~~~~~~D~i~~d~ 104 (187)
.. .+++|.++..+
T Consensus 88 ~~---~g~id~lv~nA 100 (252)
T 3f1l_A 88 VN---YPRLDGVLHNA 100 (252)
T ss_dssp HH---CSCCSEEEECC
T ss_pred Hh---CCCCCEEEECC
Confidence 11 35799988764
No 498
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=84.67 E-value=1 Score=34.40 Aligned_cols=88 Identities=15% Similarity=0.153 Sum_probs=51.9
Q ss_pred CEEEEEcccccH--HHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHhcCCC-----CcEEE----EEcchHHHHHHHhh
Q 029803 21 KKTIEIGVFTGY--SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD-----HKINF----IESEALSVLDQLLK 89 (187)
Q Consensus 21 ~~vLeiG~g~G~--~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~-----~~~~~----~~~d~~~~~~~~~~ 89 (187)
++|.-||+|.=. .+..+++. +..|+.++.++ .+. +...++. ...++ ...+. ...
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~---g~~V~~~~r~~--~~~----i~~~g~~~~~~~g~~~~~~~~~~~~~----~~~-- 67 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS---GEDVHFLLRRD--YEA----IAGNGLKVFSINGDFTLPHVKGYRAP----EEI-- 67 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT---SCCEEEECSTT--HHH----HHHTCEEEEETTCCEEESCCCEESCH----HHH--
T ss_pred CEEEEECcCHHHHHHHHHHHHC---CCeEEEEEcCc--HHH----HHhCCCEEEcCCCeEEEeeceeecCH----HHc--
Confidence 468888886433 23333332 45799999875 232 3333321 11221 01122 122
Q ss_pred cccCCCceeEEEEeCCCcccHHHHHHHHhccCCCeEEEE
Q 029803 90 YSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 128 (187)
Q Consensus 90 ~~~~~~~~D~i~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
..+|+|++..........++.+.+.++++..++.
T Consensus 68 -----~~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~ 101 (312)
T 3hn2_A 68 -----GPMDLVLVGLKTFANSRYEELIRPLVEEGTQILT 101 (312)
T ss_dssp -----CCCSEEEECCCGGGGGGHHHHHGGGCCTTCEEEE
T ss_pred -----CCCCEEEEecCCCCcHHHHHHHHhhcCCCCEEEE
Confidence 5799999977666677888999899999987765
No 499
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=84.66 E-value=5.9 Score=30.49 Aligned_cols=73 Identities=14% Similarity=0.001 Sum_probs=42.3
Q ss_pred HcCCCEEEEEccc--ccHHHHHHHhhCCCCCEEE-EEeCCcchHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029803 17 LVNAKKTIEIGVF--TGYSLLLTALTIPEDGQIT-AIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 93 (187)
Q Consensus 17 ~~~~~~vLeiG~g--~G~~~~~la~~~~~~~~v~-~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 93 (187)
..++.+|.-|||| .|..-+......+++.+++ .+|.+++..+...+.+ +. .-...|..+.+.
T Consensus 15 ~~~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~---~~----~~~~~~~~~ll~-------- 79 (340)
T 1zh8_A 15 PLRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMV---GN----PAVFDSYEELLE-------- 79 (340)
T ss_dssp -CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHH---SS----CEEESCHHHHHH--------
T ss_pred CCCceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHh---CC----CcccCCHHHHhc--------
Confidence 3455689999998 2443333344442356664 5788887665544433 32 123456655554
Q ss_pred CCceeEEEEeC
Q 029803 94 EGSFDYAFVDA 104 (187)
Q Consensus 94 ~~~~D~i~~d~ 104 (187)
...+|+|++..
T Consensus 80 ~~~vD~V~i~t 90 (340)
T 1zh8_A 80 SGLVDAVDLTL 90 (340)
T ss_dssp SSCCSEEEECC
T ss_pred CCCCCEEEEeC
Confidence 25799999864
No 500
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=84.53 E-value=7.6 Score=28.76 Aligned_cols=86 Identities=9% Similarity=0.066 Sum_probs=52.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHhcCCC-CcEEEEEcchHHH--HHHHhhcc-c
Q 029803 18 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVD-HKINFIESEALSV--LDQLLKYS-E 92 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~--~~~~~~~~-~ 92 (187)
.+++++|-.|++.| .+..+++.+ ..+.+|+.++.+++.++.+.+.+...+.. .++.++.+|..+. +..+.+.- .
T Consensus 9 l~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (281)
T 3svt_A 9 FQDRTYLVTGGGSG-IGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA 87 (281)
T ss_dssp CTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 35678888886544 444444433 23689999999998888777777665432 2688888887432 12111100 0
Q ss_pred CCCceeEEEEeC
Q 029803 93 NEGSFDYAFVDA 104 (187)
Q Consensus 93 ~~~~~D~i~~d~ 104 (187)
..++.|.++..+
T Consensus 88 ~~g~id~lv~nA 99 (281)
T 3svt_A 88 WHGRLHGVVHCA 99 (281)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 025789888764
Done!