Your job contains 1 sequence.
>029808
MSSHMLNGQKSSATSNSNSNSNNNNSKASSYYPPPTAKYEDIAQSSDLFWATLEAFHKSF
GDKFKVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRK
YYLSLLYHFEQVYYFRKEAPSSSMPDAVSGSSLDNGSASPEEGSTINQLGGQGMFHPRHF
IHSSLII
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029808
(187 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2088160 - symbol:AT3G13350 species:3702 "Arabi... 374 1.7e-34 1
TAIR|locus:2020517 - symbol:AT1G55650 species:3702 "Arabi... 337 1.4e-30 1
TAIR|locus:2010587 - symbol:AT1G04880 species:3702 "Arabi... 330 7.9e-30 1
TAIR|locus:2199824 - symbol:AT1G76110 species:3702 "Arabi... 317 1.9e-28 1
UNIPROTKB|E1C9H0 - symbol:ARID2 "Uncharacterized protein"... 221 4.1e-17 2
UNIPROTKB|Q68CP9 - symbol:ARID2 "AT-rich interactive doma... 212 1.1e-16 2
ZFIN|ZDB-GENE-030131-6311 - symbol:arid2 "AT rich interac... 201 1.4e-14 1
MGI|MGI:1328360 - symbol:Arid3a "AT rich interactive doma... 154 1.8e-12 2
UNIPROTKB|E1BGZ3 - symbol:ARID3A "Uncharacterized protein... 154 3.6e-12 2
UNIPROTKB|E2RFL8 - symbol:ARID2 "Uncharacterized protein"... 170 5.5e-12 2
UNIPROTKB|Q99856 - symbol:ARID3A "AT-rich interactive dom... 154 1.9e-11 2
UNIPROTKB|K7EJ04 - symbol:ARID3A "AT-rich interactive dom... 154 3.5e-11 1
RGD|1306335 - symbol:Arid3b "AT rich interactive domain 3... 148 8.9e-11 2
UNIPROTKB|G3MWU0 - symbol:ARID3C "Uncharacterized protein... 152 3.1e-10 1
UNIPROTKB|I3L5S4 - symbol:ARID3C "Uncharacterized protein... 152 3.1e-10 1
MGI|MGI:3650624 - symbol:Arid3c "AT rich interactive doma... 152 3.5e-10 1
RGD|1560943 - symbol:Arid3c "AT rich interactive domain 3... 152 3.5e-10 1
UNIPROTKB|E2RGA0 - symbol:ARID3C "Uncharacterized protein... 152 3.5e-10 1
UNIPROTKB|A6NKF2 - symbol:ARID3C "AT-rich interactive dom... 152 3.5e-10 1
UNIPROTKB|F1MGP2 - symbol:ARID3C "Uncharacterized protein... 152 3.6e-10 1
UNIPROTKB|F1SEC1 - symbol:ARID3C "Uncharacterized protein... 152 3.6e-10 1
UNIPROTKB|F1S6T2 - symbol:ARID3A "Uncharacterized protein... 154 4.1e-10 1
UNIPROTKB|F1PDC9 - symbol:ARID3A "Uncharacterized protein... 154 4.2e-10 1
UNIPROTKB|I3L967 - symbol:ARID3B "Uncharacterized protein... 148 6.2e-10 1
ZFIN|ZDB-GENE-070209-182 - symbol:arid3b "AT rich interac... 150 9.4e-10 1
UNIPROTKB|E1BI80 - symbol:ARID3B "Uncharacterized protein... 148 1.6e-09 1
UNIPROTKB|F1NL47 - symbol:ARID3B "Uncharacterized protein... 148 1.6e-09 1
UNIPROTKB|E2RFI5 - symbol:ARID3B "Uncharacterized protein... 148 1.6e-09 1
UNIPROTKB|Q8IVW6 - symbol:ARID3B "AT-rich interactive dom... 148 1.7e-09 1
MGI|MGI:1930768 - symbol:Arid3b "AT rich interactive doma... 148 1.7e-09 1
UNIPROTKB|H3BQ92 - symbol:ARID3B "AT-rich interactive dom... 138 1.8e-09 1
UNIPROTKB|F1NAK8 - symbol:LOC100858693 "Uncharacterized p... 140 5.8e-09 1
WB|WBGene00000476 - symbol:cfi-1 species:6239 "Caenorhabd... 138 1.5e-08 1
UNIPROTKB|H9KYS8 - symbol:ARID1A "Uncharacterized protein... 134 2.0e-08 2
ZFIN|ZDB-GENE-080220-35 - symbol:arid1aa "AT rich interac... 142 4.2e-08 1
FB|FBgn0004795 - symbol:retn "retained" species:7227 "Dro... 137 4.9e-08 1
ZFIN|ZDB-GENE-030131-5725 - symbol:arid1ab "AT rich inter... 133 5.3e-08 2
UNIPROTKB|H0Y3S9 - symbol:ARID1B "AT-rich interactive dom... 126 1.0e-07 1
UNIPROTKB|J9NTN3 - symbol:ARID1A "Uncharacterized protein... 137 1.2e-07 1
UNIPROTKB|E2RSH9 - symbol:ARID1A "Uncharacterized protein... 137 1.4e-07 1
UNIPROTKB|E1B925 - symbol:ARID1A "Uncharacterized protein... 135 2.1e-07 1
MGI|MGI:1935147 - symbol:Arid1a "AT rich interactive doma... 135 2.3e-07 1
UNIPROTKB|O14497 - symbol:ARID1A "AT-rich interactive dom... 135 2.3e-07 1
RGD|1310500 - symbol:Arid1a "AT rich interactive domain 1... 135 2.3e-07 1
DICTYBASE|DDB_G0275333 - symbol:DDB_G0275333 "ARID/BRIGHT... 124 5.0e-07 1
UNIPROTKB|F1SB28 - symbol:ARID1B "Uncharacterized protein... 129 5.3e-07 1
UNIPROTKB|H0Y2R3 - symbol:ARID1B "AT-rich interactive dom... 126 5.5e-07 1
TAIR|locus:2037345 - symbol:AT1G20910 species:3702 "Arabi... 122 6.1e-07 1
UNIPROTKB|F1P479 - symbol:Gga.35990 "Uncharacterized prot... 129 6.8e-07 1
UNIPROTKB|F1NKI7 - symbol:Gga.35990 "Uncharacterized prot... 129 6.8e-07 1
FB|FBgn0042085 - symbol:Bap170 "Brahma associated protein... 121 7.1e-07 2
UNIPROTKB|E1BKQ8 - symbol:Bt.110992 "Uncharacterized prot... 126 1.3e-06 1
UNIPROTKB|F1MKU0 - symbol:Bt.110992 "Uncharacterized prot... 126 1.4e-06 1
UNIPROTKB|F1LNP1 - symbol:F1LNP1 "Uncharacterized protein... 126 1.6e-06 1
UNIPROTKB|H0Y7H8 - symbol:ARID1B "AT-rich interactive dom... 126 1.6e-06 1
UNIPROTKB|G3XAA0 - symbol:ARID1B "AT rich interactive dom... 126 2.0e-06 1
UNIPROTKB|Q8NFD5 - symbol:ARID1B "AT-rich interactive dom... 126 2.0e-06 1
UNIPROTKB|F1PBJ5 - symbol:ARID1B "Uncharacterized protein... 126 2.0e-06 1
FB|FBgn0261885 - symbol:osa "osa" species:7227 "Drosophil... 120 3.3e-05 1
UNIPROTKB|G4N2P7 - symbol:MGG_04878 "Lid2 complex compone... 118 6.6e-05 1
WB|WBGene00002717 - symbol:let-526 species:6239 "Caenorha... 111 0.00010 3
FB|FBgn0031759 - symbol:lid "little imaginal discs" speci... 115 0.00024 1
UNIPROTKB|C9JGA3 - symbol:KDM5D "Lysine-specific demethyl... 109 0.00031 1
UNIPROTKB|F1NN75 - symbol:KDM5A "Uncharacterized protein"... 114 0.00031 1
TAIR|locus:2827523 - symbol:AT2G17410 species:3702 "Arabi... 111 0.00036 1
MGI|MGI:99780 - symbol:Kdm5d "lysine (K)-specific demethy... 113 0.00039 1
RGD|708504 - symbol:Arid1b "AT rich interactive domain 1B... 113 0.00045 1
>TAIR|locus:2088160 [details] [associations]
symbol:AT3G13350 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006333 "chromatin assembly or disassembly"
evidence=RCA] InterPro:IPR009071 InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 Pfam:PF00505 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:1.10.150.60 SUPFAM:SSF46774 eggNOG:NOG327790
EMBL:AB024034 EMBL:AF361582 EMBL:AY133557 EMBL:AY087770
IPI:IPI00541454 RefSeq:NP_566454.1 UniGene:At.27664 HSSP:P07155
ProteinModelPortal:Q9LTT3 SMR:Q9LTT3 IntAct:Q9LTT3 PaxDb:Q9LTT3
PRIDE:Q9LTT3 EnsemblPlants:AT3G13350.1 GeneID:820535
KEGG:ath:AT3G13350 TAIR:At3g13350 HOGENOM:HOG000243289
InParanoid:Q9LTT3 OMA:GVLYHIP PhylomeDB:Q9LTT3
ProtClustDB:CLSN2681954 Genevestigator:Q9LTT3 Uniprot:Q9LTT3
Length = 319
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 75/134 (55%), Positives = 90/134 (67%)
Query: 37 AKYEDIAQSSDLFWATLEAFHKSFGDKFKVPTVGGKALDLHRLFVEVTSRGGLGKVIRDR 96
AKY+D+ ++S LFW L AF KVPTVGG LDLHRLF+EVTSRGG+ +V++DR
Sbjct: 34 AKYDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDR 93
Query: 97 RWKEVVVVFNFPTTITSASFVLRKYYLSLLYHFEQVYYFRKEAPSSSMPDAVSGSSLDNG 156
+WKEV+ F+FPTTITSASFVLRKYYL L+ E VYY K S D SL N
Sbjct: 94 KWKEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHVYYLEKPVSSLQSTDEAL-KSLANE 152
Query: 157 SASPEEGSTINQLG 170
S +PEEG Q+G
Sbjct: 153 SPNPEEGIDEPQVG 166
>TAIR|locus:2020517 [details] [associations]
symbol:AT1G55650 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009507 "chloroplast" evidence=IDA]
InterPro:IPR009071 InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011
SMART:SM00501 Pfam:PF00505 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0009507 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC002328
IPI:IPI00543464 PIR:H96598 RefSeq:NP_175961.1 UniGene:At.52216
ProteinModelPortal:Q9LG02 SMR:Q9LG02 PRIDE:Q9LG02
EnsemblPlants:AT1G55650.1 GeneID:842014 KEGG:ath:AT1G55650
TAIR:At1g55650 InParanoid:Q9LG02 Genevestigator:Q9LG02
Uniprot:Q9LG02
Length = 337
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 65/105 (61%), Positives = 82/105 (78%)
Query: 39 YEDIAQSSDLFWATLEAFHKSFGDKFKVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRW 98
Y+DI ++ +LFW L FH+S KFK+P VGGK+LDLHRLF EVTSRGGL KVI+DRR
Sbjct: 30 YQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRRC 89
Query: 99 KEVVVVFNFPTTITSASFVLRKYYLSLLYHFEQVYYFRKEAPSSS 143
KEV+ FNF TTIT+++FVLRK YL +L+ FE +YYF +AP S+
Sbjct: 90 KEVIDAFNFKTTITNSAFVLRKSYLKMLFEFEHLYYF--QAPLST 132
>TAIR|locus:2010587 [details] [associations]
symbol:AT1G04880 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006333 "chromatin assembly or
disassembly" evidence=RCA] InterPro:IPR009071 InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 Pfam:PF00505
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 EMBL:AC004809 Gene3D:1.10.150.60
SUPFAM:SSF46774 HSSP:P07155 HOGENOM:HOG000243289
ProtClustDB:CLSN2681954 EMBL:BT020255 EMBL:BT020442 EMBL:AB493433
IPI:IPI00523331 PIR:B86182 RefSeq:NP_171980.1 UniGene:At.42427
ProteinModelPortal:Q9MAT6 SMR:Q9MAT6 PaxDb:Q9MAT6 PRIDE:Q9MAT6
EnsemblPlants:AT1G04880.1 GeneID:839388 KEGG:ath:AT1G04880
TAIR:At1g04880 eggNOG:NOG236327 InParanoid:Q9MAT6 OMA:EMEDYRE
PhylomeDB:Q9MAT6 Genevestigator:Q9MAT6 Uniprot:Q9MAT6
Length = 448
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 67/153 (43%), Positives = 88/153 (57%)
Query: 35 PTAKYEDIAQSSDLFWATLEAFHKSFGDKFKVPTVGGKALDLHRLFVEVTSRGGLGKVIR 94
P A YE + LF +LE H G KF VP +GG+ LDLH+LFVEVTSRGG+ K++
Sbjct: 21 PEATYEAVVADPRLFMTSLERLHSLLGTKFMVPIIGGRDLDLHKLFVEVTSRGGINKILN 80
Query: 95 DRRWKEVVVVFNFPTTITSASFVLRKYYLSLLYHFEQVYYFRK--EAPSSSMPDAVSGSS 152
+RRWKEV F FP T T+AS+VLRKYY SLL ++EQ+Y+FR + P SM +
Sbjct: 81 ERRWKEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFFRSNGQIPPDSMQSPSARPC 140
Query: 153 LDNGSASPEEGSTINQLGGQGMFHPRHFIHSSL 185
G+ P + Q + F+ SL
Sbjct: 141 FIQGAIRPSQELQALTFTPQPKINTAEFLGGSL 173
>TAIR|locus:2199824 [details] [associations]
symbol:AT1G76110 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006333 "chromatin
assembly or disassembly" evidence=RCA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009617 "response to
bacterium" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0010310 "regulation of hydrogen peroxide metabolic process"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] [GO:0031348 "negative regulation of defense response"
evidence=RCA] [GO:0035304 "regulation of protein dephosphorylation"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR009071 InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 Pfam:PF00505
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 EMBL:AC009978 Gene3D:1.10.150.60
SUPFAM:SSF46774 eggNOG:NOG327790 HOGENOM:HOG000243289
ProtClustDB:CLSN2681954 HSSP:P11632 EMBL:AY099630 EMBL:BT008823
IPI:IPI00540147 PIR:B96789 RefSeq:NP_177738.1 UniGene:At.43665
ProteinModelPortal:Q9SGS2 SMR:Q9SGS2 IntAct:Q9SGS2 PaxDb:Q9SGS2
PRIDE:Q9SGS2 EnsemblPlants:AT1G76110.1 GeneID:843943
KEGG:ath:AT1G76110 TAIR:At1g76110 InParanoid:Q9SGS2 OMA:FMIPVIG
PhylomeDB:Q9SGS2 Genevestigator:Q9SGS2 Uniprot:Q9SGS2
Length = 338
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 58/109 (53%), Positives = 75/109 (68%)
Query: 32 YPPPTAKYEDIAQSSDLFWATLEAFHKSFGDKFKVPTVGGKALDLHRLFVEVTSRGGLGK 91
YP P A +E + + S +FW TL FH KF +P +GGK LDLH L+VEVT RGG K
Sbjct: 27 YPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGYEK 86
Query: 92 VIRDRRWKEVVVVFNFPTTITSASFVLRKYYLSLLYHFEQVYYFRKEAP 140
V+ +++W+EV VF F T TSASFVLRK+YL+LL+H+EQV+ F P
Sbjct: 87 VVVEKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARGP 135
>UNIPROTKB|E1C9H0 [details] [associations]
symbol:ARID2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IEA]
InterPro:IPR001606 InterPro:IPR003150 InterPro:IPR007087
InterPro:IPR015880 Pfam:PF01388 Pfam:PF02257 PROSITE:PS00028
PROSITE:PS51011 PROSITE:PS51526 SMART:SM00355 SMART:SM00501
GO:GO:0006355 GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005622 GO:GO:0006337 Gene3D:1.10.150.60
SUPFAM:SSF46774 OMA:IQNSIPQ GeneTree:ENSGT00390000016138
EMBL:AADN02010001 EMBL:AADN02010002 EMBL:AADN02010003
IPI:IPI00593469 Ensembl:ENSGALT00000015735 Uniprot:E1C9H0
Length = 1831
Score = 221 (82.9 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 43/91 (47%), Positives = 59/91 (64%)
Query: 49 FWATLEAFHKSFGDKFK-VPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNF 107
F L FH S G FK +P VGGK LDLH L+ VT+ GG GKV +W E+V FNF
Sbjct: 19 FLDELRQFHHSRGSPFKKIPVVGGKELDLHALYTRVTTLGGFGKVSEKNQWGEIVEEFNF 78
Query: 108 PTTITSASFVLRKYYLSLLYHFEQVYYFRKE 138
P + ++A+F L++YYL L +E+V++F +E
Sbjct: 79 PRSCSNAAFALKQYYLRYLEKYEKVHHFGEE 109
Score = 34 (17.0 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 140 PSSSMPDAVSGSSLDNGSASPEEGSTINQL 169
P S++ + G + N A+ +G+T NQ+
Sbjct: 1140 PISNL-QILPGQLISNSPATIFQGTTGNQV 1168
>UNIPROTKB|Q68CP9 [details] [associations]
symbol:ARID2 "AT-rich interactive domain-containing protein
2" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006337 "nucleosome disassembly" evidence=IDA]
InterPro:IPR001606 InterPro:IPR003150 InterPro:IPR007087
InterPro:IPR015880 Pfam:PF01388 Pfam:PF02257 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS51011 PROSITE:PS51526 SMART:SM00355
SMART:SM00501 EMBL:DQ096628 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0016568 GO:GO:0006337
Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AY727870 EMBL:AL832200
EMBL:BX537879 EMBL:CR749833 EMBL:AK027718 EMBL:AK127872
EMBL:BC090062 EMBL:AB046777 IPI:IPI00444237 IPI:IPI00470537
IPI:IPI00647133 RefSeq:NP_689854.2 UniGene:Hs.317304
ProteinModelPortal:Q68CP9 SMR:Q68CP9 DIP:DIP-33391N IntAct:Q68CP9
STRING:Q68CP9 PhosphoSite:Q68CP9 DMDM:73921721 PaxDb:Q68CP9
PRIDE:Q68CP9 DNASU:196528 Ensembl:ENST00000334344 GeneID:196528
KEGG:hsa:196528 UCSC:uc001ror.3 CTD:196528 GeneCards:GC12P046123
HGNC:HGNC:18037 MIM:609539 neXtProt:NX_Q68CP9 PharmGKB:PA134916396
eggNOG:NOG311317 HOVERGEN:HBG068777 InParanoid:Q68CP9 KO:K11765
OMA:IQNSIPQ OrthoDB:EOG49KFPP GenomeRNAi:196528 NextBio:89525
PMAP-CutDB:Q68CP9 ArrayExpress:Q68CP9 Bgee:Q68CP9
Genevestigator:Q68CP9 Uniprot:Q68CP9
Length = 1835
Score = 212 (79.7 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 44/106 (41%), Positives = 64/106 (60%)
Query: 34 PPTAKYEDIAQSSDLFWATLEAFHKSFGDKFK-VPTVGGKALDLHRLFVEVTSRGGLGKV 92
PP + + +A F L FH S G FK +P VGGK LDLH L+ VT+ GG KV
Sbjct: 9 PPDERRKGLA-----FLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGFAKV 63
Query: 93 IRDRRWKEVVVVFNFPTTITSASFVLRKYYLSLLYHFEQVYYFRKE 138
+W E+V FNFP + ++A+F L++YYL L +E+V++F ++
Sbjct: 64 SEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGED 109
Score = 39 (18.8 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 140 PSSSMPDAVSGSS 152
P+SS P SGSS
Sbjct: 1607 PNSSQPSPFSGSS 1619
Score = 36 (17.7 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 141 SSSMPDAVSGSSLDNGSASPEE 162
S ++P+ + + + NG SP E
Sbjct: 1373 SKNIPNHKTSNHVGNGEISPME 1394
>ZFIN|ZDB-GENE-030131-6311 [details] [associations]
symbol:arid2 "AT rich interactive domain 2 (ARID,
RFX-like)" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR003150 InterPro:IPR007087
InterPro:IPR015880 InterPro:IPR016024 Pfam:PF01388 Pfam:PF02257
PROSITE:PS00028 PROSITE:PS51011 PROSITE:PS51526 SMART:SM00355
SMART:SM00501 ZFIN:ZDB-GENE-030131-6311 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006355 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622
Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:CR847994 EMBL:AL929171
GeneTree:ENSGT00390000016138 IPI:IPI00933367
Ensembl:ENSDART00000113360 Uniprot:E7F3J3
Length = 1573
Score = 201 (75.8 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 43/91 (47%), Positives = 57/91 (62%)
Query: 49 FWATLEAFHKSFGDKFK-VPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNF 107
F L FH S G FK VP VGGK LDL L+V V S GG KV +W E+V F F
Sbjct: 19 FLDELRQFHHSRGSPFKKVPVVGGKELDLGALYVRVVSLGGFAKVSDKNQWVELVEDFQF 78
Query: 108 PTTITSASFVLRKYYLSLLYHFEQVYYFRKE 138
P + ++A+FVL++YYL L +E+V++F +E
Sbjct: 79 PRSCSNAAFVLKQYYLRYLEKYEKVHHFGEE 109
>MGI|MGI:1328360 [details] [associations]
symbol:Arid3a "AT rich interactive domain 3A (BRIGHT-like)"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0045121 "membrane raft" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI] InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011
SMART:SM00501 MGI:MGI:1328360 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 GO:GO:0045121 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 CTD:1820 eggNOG:NOG327790
HOGENOM:HOG000236281 HOVERGEN:HBG050574 OMA:NGIMYTG
OrthoDB:EOG4Z36GC InterPro:IPR023334 PROSITE:PS51486 EMBL:U60335
EMBL:AK141283 EMBL:AK154956 EMBL:BC050925 IPI:IPI00125956
RefSeq:NP_031906.1 UniGene:Mm.301282 ProteinModelPortal:Q62431
SMR:Q62431 STRING:Q62431 PhosphoSite:Q62431 PaxDb:Q62431
PRIDE:Q62431 Ensembl:ENSMUST00000019708 Ensembl:ENSMUST00000105376
Ensembl:ENSMUST00000105377 GeneID:13496 KEGG:mmu:13496
UCSC:uc007gap.1 InParanoid:Q62431 ChiTaRS:ARID3A NextBio:284025
Bgee:Q62431 CleanEx:MM_ARID3A Genevestigator:Q62431
GermOnline:ENSMUSG00000019564 Uniprot:Q62431
Length = 601
Score = 154 (59.3 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 65 KVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLS 124
++P + + LDL L+V VT +GGL +VI + W+E+ N PT+ITSA+F LR Y+
Sbjct: 266 RIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMK 325
Query: 125 LLYHFE 130
LY +E
Sbjct: 326 YLYPYE 331
Score = 45 (20.9 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 139 APSSSMPDAVS--GSSLDNGSASPEEGSTINQLGGQ 172
APS+ VS G++ GS + GST++ GGQ
Sbjct: 548 APSAPGKGGVSSIGTNTTTGSRTGASGSTVS--GGQ 581
>UNIPROTKB|E1BGZ3 [details] [associations]
symbol:ARID3A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045121 "membrane raft"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0005634
GO:GO:0003677 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
GO:GO:0045121 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 OMA:NGIMYTG InterPro:IPR023334
PROSITE:PS51486 EMBL:DAAA02020237 EMBL:DAAA02020238
EMBL:DAAA02020239 IPI:IPI00696235 UniGene:Bt.45437
ProteinModelPortal:E1BGZ3 Ensembl:ENSBTAT00000011354
NextBio:20869863 Uniprot:E1BGZ3
Length = 590
Score = 154 (59.3 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 65 KVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLS 124
++P + + LDL L+V VT +GGL +VI + W+E+ N PT+ITSA+F LR Y+
Sbjct: 264 RIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMK 323
Query: 125 LLYHFE 130
LY +E
Sbjct: 324 YLYPYE 329
Score = 42 (19.8 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 132 VYYFRKEAPSS-SMPDAVSGSSL---DNGSASPEEGSTINQLGGQGMFHP 177
V + + AP+ S P GSS ++G+ S S +Q G GM P
Sbjct: 531 VLFAQPPAPTPPSAPSKGGGSSSRGGNSGTNSSSSSSAGSQAGPAGMSAP 580
>UNIPROTKB|E2RFL8 [details] [associations]
symbol:ARID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR001606 InterPro:IPR003150
InterPro:IPR007087 InterPro:IPR015880 Pfam:PF01388 Pfam:PF02257
PROSITE:PS00028 PROSITE:PS51011 PROSITE:PS51526 SMART:SM00355
SMART:SM00501 GO:GO:0006355 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0006337
Gene3D:1.10.150.60 SUPFAM:SSF46774 OMA:IQNSIPQ
GeneTree:ENSGT00390000016138 EMBL:AAEX03015115 EMBL:AAEX03015116
Ensembl:ENSCAFT00000014865 Uniprot:E2RFL8
Length = 1836
Score = 170 (64.9 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 39/106 (36%), Positives = 58/106 (54%)
Query: 34 PPTAKYEDIAQSSDLFWATLEAFHKSFGDKFKV-PTVGGKALDLHRLFVEVTSRGGLGKV 92
PP + + +A F L FH S G ++ P VGG DLH L E GG KV
Sbjct: 9 PPDERRKGLA-----FLDELRQFHHSRGSPCQIIPAVGGNPPDLHGLKPESPPVGGFAKV 63
Query: 93 IRDRRWKEVVVVFNFPTTITSASFVLRKYYLSLLYHFEQVYYFRKE 138
+W E+V FNFP + ++A+F L++YYL L +E+V++F ++
Sbjct: 64 SEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGED 109
Score = 36 (17.7 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 141 SSSMPDAVSGSSLDNGSASPEE 162
S ++P+ + + + NG SP E
Sbjct: 1373 SKNIPNHKTSNHVGNGEISPVE 1394
>UNIPROTKB|Q99856 [details] [associations]
symbol:ARID3A "AT-rich interactive domain-containing
protein 3A" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] [GO:0045121 "membrane raft" evidence=IDA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 GO:GO:0045121
Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:U88047 EMBL:AF039850
EMBL:AF039844 EMBL:AF039845 EMBL:AF039846 EMBL:AF039847
EMBL:AF039848 EMBL:AF039849 EMBL:AY152547 EMBL:AY845638
EMBL:AC005391 EMBL:AC005379 EMBL:BC033163 EMBL:BC060828
IPI:IPI00018500 RefSeq:NP_005215.1 UniGene:Hs.501296 PDB:2KK0
PDBsum:2KK0 ProteinModelPortal:Q99856 SMR:Q99856 STRING:Q99856
PhosphoSite:Q99856 DMDM:12230034 PaxDb:Q99856 PRIDE:Q99856
DNASU:1820 Ensembl:ENST00000263620 GeneID:1820 KEGG:hsa:1820
UCSC:uc002lql.3 CTD:1820 GeneCards:GC19P000926 HGNC:HGNC:3031
HPA:HPA004793 MIM:603265 neXtProt:NX_Q99856 PharmGKB:PA27485
eggNOG:NOG327790 HOGENOM:HOG000236281 HOVERGEN:HBG050574
InParanoid:Q99856 OMA:NGIMYTG OrthoDB:EOG4Z36GC PhylomeDB:Q99856
EvolutionaryTrace:Q99856 GenomeRNAi:1820 NextBio:7417 Bgee:Q99856
CleanEx:HS_ARID3A Genevestigator:Q99856 GermOnline:ENSG00000116017
InterPro:IPR023334 PROSITE:PS51486 Uniprot:Q99856
Length = 593
Score = 154 (59.3 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 65 KVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLS 124
++P + + LDL L+V VT +GGL +VI + W+E+ N PT+ITSA+F LR Y+
Sbjct: 261 RIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMK 320
Query: 125 LLYHFE 130
LY +E
Sbjct: 321 YLYPYE 326
Score = 35 (17.4 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 150 GSSLDNGSASPEEGSTINQLGGQGMFHP 177
GSS + G G++ Q G G+ P
Sbjct: 556 GSSSNAGGRGGNTGTSGGQAGPAGLSTP 583
>UNIPROTKB|K7EJ04 [details] [associations]
symbol:ARID3A "AT-rich interactive domain-containing
protein 3A" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005391 EMBL:AC005379
HGNC:HGNC:3031 InterPro:IPR023334 PROSITE:PS51486
Ensembl:ENST00000587532 Uniprot:K7EJ04
Length = 182
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 65 KVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLS 124
++P + + LDL L+V VT +GGL +VI + W+E+ N PT+ITSA+F LR Y+
Sbjct: 10 RIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMK 69
Query: 125 LLYHFE 130
LY +E
Sbjct: 70 YLYPYE 75
>RGD|1306335 [details] [associations]
symbol:Arid3b "AT rich interactive domain 3B (Bright like)"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
RGD:1306335 GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR023334 PROSITE:PS51486 IPI:IPI00370524
Ensembl:ENSRNOT00000026736 UCSC:RGD:1306335 ArrayExpress:D4A102
Uniprot:D4A102
Length = 560
Score = 148 (57.2 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 65 KVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLS 124
++P + + LDL+ L+ VT +GGL ++I + W+E+ N PT+ITSA+F LR Y+
Sbjct: 230 RIPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMK 289
Query: 125 LLYHFE 130
LY +E
Sbjct: 290 YLYAYE 295
Score = 34 (17.0 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 10/44 (22%), Positives = 19/44 (43%)
Query: 122 YLSLLYHFEQVYYFRKEAPSSSMPDAVSGSSLDNGSASPEEGST 165
Y +L+ + V + + S+ + S SS + SP S+
Sbjct: 503 YTGVLFAQKPVVHLIAGSAPQSIGSSASSSSSSSSHCSPSPTSS 546
>UNIPROTKB|G3MWU0 [details] [associations]
symbol:ARID3C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 GO:GO:0003677 GO:GO:0005622
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
EMBL:DAAA02023880 Ensembl:ENSBTAT00000064321 Uniprot:G3MWU0
Length = 385
Score = 152 (58.6 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 65 KVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLS 124
+VP + + LDL+ LF VT++GGL +VI + W+EV + PTTITSA+F LR Y+
Sbjct: 141 RVPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMK 200
Query: 125 LLYHFE 130
LY +E
Sbjct: 201 YLYPYE 206
>UNIPROTKB|I3L5S4 [details] [associations]
symbol:ARID3C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 GO:GO:0003677 GO:GO:0005622
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
EMBL:CU928717 Ensembl:ENSSSCT00000025460 Uniprot:I3L5S4
Length = 386
Score = 152 (58.6 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 65 KVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLS 124
+VP + + LDL+ LF VT++GGL +VI + W+EV + PTTITSA+F LR Y+
Sbjct: 138 RVPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMK 197
Query: 125 LLYHFE 130
LY +E
Sbjct: 198 YLYPYE 203
>MGI|MGI:3650624 [details] [associations]
symbol:Arid3c "AT rich interactive domain 3C (BRIGHT-like)"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045121 "membrane
raft" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
MGI:MGI:3650624 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0045944 GO:GO:0006351 GO:GO:0003682 GO:GO:0045121
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
eggNOG:NOG327790 HOGENOM:HOG000236281 HOVERGEN:HBG050574
InterPro:IPR023334 PROSITE:PS51486 CTD:138715 OMA:FARRQPV
EMBL:AL807796 EMBL:BC141237 IPI:IPI00556830 RefSeq:NP_001017362.1
UniGene:Mm.425179 ProteinModelPortal:A6PWV5 SMR:A6PWV5
PhosphoSite:A6PWV5 PRIDE:A6PWV5 Ensembl:ENSMUST00000084698
Ensembl:ENSMUST00000171251 GeneID:550619 KEGG:mmu:550619
UCSC:uc008sjj.1 InParanoid:B2RUN0 NextBio:414311 Bgee:A6PWV5
Genevestigator:A6PWV5 Uniprot:A6PWV5
Length = 409
Score = 152 (58.6 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 65 KVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLS 124
+VP + + LDL+ LF VT++GGL +VI + W+EV + PTTITSA+F LR Y+
Sbjct: 133 RVPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMK 192
Query: 125 LLYHFE 130
LY +E
Sbjct: 193 YLYPYE 198
>RGD|1560943 [details] [associations]
symbol:Arid3c "AT rich interactive domain 3C (BRIGHT-like)"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0045121 "membrane raft" evidence=IEA;ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 RGD:1560943
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0045944
GO:GO:0003682 GO:GO:0045121 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 InterPro:IPR023334 PROSITE:PS51486
OrthoDB:EOG415GF5 CTD:138715 OMA:FARRQPV IPI:IPI00563895
RefSeq:NP_001167452.1 UniGene:Rn.225882 ProteinModelPortal:D3ZQB1
Ensembl:ENSRNOT00000046589 GeneID:502946 KEGG:rno:502946
UCSC:RGD:1560943 NextBio:712863 Uniprot:D3ZQB1
Length = 410
Score = 152 (58.6 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 65 KVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLS 124
+VP + + LDL+ LF VT++GGL +VI + W+EV + PTTITSA+F LR Y+
Sbjct: 134 RVPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMK 193
Query: 125 LLYHFE 130
LY +E
Sbjct: 194 YLYPYE 199
>UNIPROTKB|E2RGA0 [details] [associations]
symbol:ARID3C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045121
"membrane raft" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0045944
GO:GO:0003682 GO:GO:0045121 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 InterPro:IPR023334 PROSITE:PS51486
CTD:138715 OMA:FARRQPV EMBL:AAEX03007945 RefSeq:XP_854656.1
ProteinModelPortal:E2RGA0 Ensembl:ENSCAFT00000028460 GeneID:611843
KEGG:cfa:611843 NextBio:20897379 Uniprot:E2RGA0
Length = 411
Score = 152 (58.6 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 65 KVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLS 124
+VP + + LDL+ LF VT++GGL +VI + W+EV + PTTITSA+F LR Y+
Sbjct: 135 RVPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMK 194
Query: 125 LLYHFE 130
LY +E
Sbjct: 195 YLYPYE 200
>UNIPROTKB|A6NKF2 [details] [associations]
symbol:ARID3C "AT-rich interactive domain-containing
protein 3C" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0045121
"membrane raft" evidence=IDA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0045944 GO:GO:0006351 GO:GO:0003682
GO:GO:0045121 Gene3D:1.10.150.60 SUPFAM:SSF46774 eggNOG:NOG327790
HOGENOM:HOG000236281 HOVERGEN:HBG050574 InterPro:IPR023334
PROSITE:PS51486 OrthoDB:EOG415GF5 EMBL:AL450283 IPI:IPI00062225
RefSeq:NP_001017363.1 UniGene:Hs.534549 ProteinModelPortal:A6NKF2
SMR:A6NKF2 STRING:A6NKF2 PhosphoSite:A6NKF2 PaxDb:A6NKF2
PRIDE:A6NKF2 DNASU:138715 Ensembl:ENST00000378909 GeneID:138715
KEGG:hsa:138715 UCSC:uc011lon.2 CTD:138715 GeneCards:GC09M034621
HGNC:HGNC:21209 neXtProt:NX_A6NKF2 PharmGKB:PA134928507
InParanoid:A6NKF2 OMA:FARRQPV GenomeRNAi:138715 NextBio:83815
Bgee:A6NKF2 CleanEx:HS_ARID3C Genevestigator:A6NKF2 Uniprot:A6NKF2
Length = 412
Score = 152 (58.6 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 65 KVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLS 124
+VP + + LDL+ LF VT++GGL +VI + W+EV + PTTITSA+F LR Y+
Sbjct: 136 RVPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMK 195
Query: 125 LLYHFE 130
LY +E
Sbjct: 196 YLYPYE 201
>UNIPROTKB|F1MGP2 [details] [associations]
symbol:ARID3C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045121 "membrane raft"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0045944
GO:GO:0003682 GO:GO:0045121 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 InterPro:IPR023334 PROSITE:PS51486
CTD:138715 OMA:FARRQPV EMBL:DAAA02023880 IPI:IPI00842301
RefSeq:XP_002689857.1 RefSeq:XP_600416.3 ProteinModelPortal:F1MGP2
Ensembl:ENSBTAT00000036468 GeneID:522142 KEGG:bta:522142
NextBio:20873455 Uniprot:F1MGP2
Length = 415
Score = 152 (58.6 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 65 KVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLS 124
+VP + + LDL+ LF VT++GGL +VI + W+EV + PTTITSA+F LR Y+
Sbjct: 141 RVPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMK 200
Query: 125 LLYHFE 130
LY +E
Sbjct: 201 YLYPYE 206
>UNIPROTKB|F1SEC1 [details] [associations]
symbol:ARID3C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045121 "membrane raft"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0045944
GO:GO:0003682 GO:GO:0045121 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 InterPro:IPR023334 PROSITE:PS51486
OMA:FARRQPV EMBL:CU928717 RefSeq:XP_003130719.1 UniGene:Ssc.88977
Ensembl:ENSSSCT00000012008 GeneID:100524334 KEGG:ssc:100524334
Uniprot:F1SEC1
Length = 416
Score = 152 (58.6 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 65 KVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLS 124
+VP + + LDL+ LF VT++GGL +VI + W+EV + PTTITSA+F LR Y+
Sbjct: 138 RVPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMK 197
Query: 125 LLYHFE 130
LY +E
Sbjct: 198 YLYPYE 203
>UNIPROTKB|F1S6T2 [details] [associations]
symbol:ARID3A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045121 "membrane raft"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0005634
GO:GO:0003677 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
GO:GO:0045121 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 CTD:1820 OMA:NGIMYTG
InterPro:IPR023334 PROSITE:PS51486 EMBL:FP475994
RefSeq:XP_003354004.1 Ensembl:ENSSSCT00000014658 GeneID:100622803
KEGG:ssc:100622803 Uniprot:F1S6T2
Length = 596
Score = 154 (59.3 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 65 KVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLS 124
++P + + LDL L+V VT +GGL +VI + W+E+ N PT+ITSA+F LR Y+
Sbjct: 265 RIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMK 324
Query: 125 LLYHFE 130
LY +E
Sbjct: 325 YLYPYE 330
>UNIPROTKB|F1PDC9 [details] [associations]
symbol:ARID3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0003677
GO:GO:0005622 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 CTD:1820 OMA:NGIMYTG
InterPro:IPR023334 PROSITE:PS51486 EMBL:AAEX03012672
RefSeq:XP_855193.3 Ensembl:ENSCAFT00000031240 GeneID:612370
KEGG:cfa:612370 Uniprot:F1PDC9
Length = 605
Score = 154 (59.3 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 65 KVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLS 124
++P + + LDL L+V VT +GGL +VI + W+E+ N PT+ITSA+F LR Y+
Sbjct: 279 RIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMK 338
Query: 125 LLYHFE 130
LY +E
Sbjct: 339 YLYPYE 344
>UNIPROTKB|I3L967 [details] [associations]
symbol:ARID3B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 GO:GO:0003677 GO:GO:0005622
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
InterPro:IPR023334 PROSITE:PS51486 EMBL:CU469022 EMBL:CU638715
Ensembl:ENSSSCT00000023820 OMA:MNIRISG Uniprot:I3L967
Length = 336
Score = 148 (57.2 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 65 KVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLS 124
++P + + LDL+ L+ VT +GGL ++I + W+E+ N PT+ITSA+F LR Y+
Sbjct: 10 RIPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMK 69
Query: 125 LLYHFE 130
LY +E
Sbjct: 70 YLYAYE 75
>ZFIN|ZDB-GENE-070209-182 [details] [associations]
symbol:arid3b "AT rich interactive domain 3B
(Bright like)" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 ZFIN:ZDB-GENE-070209-182
GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 eggNOG:NOG327790 HOGENOM:HOG000236281
InterPro:IPR023334 PROSITE:PS51486 CTD:10620 OrthoDB:EOG415GF5
EMBL:CR376821 EMBL:CU181885 EMBL:FP017193 EMBL:BC131867
IPI:IPI00915616 RefSeq:NP_001076471.1 UniGene:Dr.150509 SMR:A2RRV2
Ensembl:ENSDART00000103470 GeneID:571249 KEGG:dre:571249
HOVERGEN:HBG095882 InParanoid:A2RRV2 OMA:NANTREE NextBio:20890475
Uniprot:A2RRV2
Length = 537
Score = 150 (57.9 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 28/66 (42%), Positives = 43/66 (65%)
Query: 65 KVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLS 124
++P + + LDL+ L+ VT +GGL +VI + W+E+ N PT+ITSA+F LR Y+
Sbjct: 214 RIPIMAKQVLDLYMLYKLVTEKGGLVEVINKKIWREITKGLNLPTSITSAAFTLRTQYMK 273
Query: 125 LLYHFE 130
LY +E
Sbjct: 274 YLYPYE 279
>UNIPROTKB|E1BI80 [details] [associations]
symbol:ARID3B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 GO:GO:0003677 GO:GO:0005622
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
InterPro:IPR023334 PROSITE:PS51486 CTD:10620 OMA:LFSMARQ
EMBL:DAAA02052500 EMBL:DAAA02052501 EMBL:DAAA02052502
IPI:IPI00706373 RefSeq:NP_001179977.1 UniGene:Bt.24486
ProteinModelPortal:E1BI80 Ensembl:ENSBTAT00000015698 GeneID:532938
KEGG:bta:532938 NextBio:20875853 Uniprot:E1BI80
Length = 553
Score = 148 (57.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 65 KVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLS 124
++P + + LDL+ L+ VT +GGL ++I + W+E+ N PT+ITSA+F LR Y+
Sbjct: 236 RIPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMK 295
Query: 125 LLYHFE 130
LY +E
Sbjct: 296 YLYAYE 301
>UNIPROTKB|F1NL47 [details] [associations]
symbol:ARID3B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 GO:GO:0003677 GO:GO:0005622
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
InterPro:IPR023334 PROSITE:PS51486 EMBL:AADN02051006
EMBL:AADN02051007 IPI:IPI00585316 Ensembl:ENSGALT00000002097
OMA:IRINGRX Uniprot:F1NL47
Length = 559
Score = 148 (57.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 65 KVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLS 124
++P + + LDL+ L+ VT +GGL ++I + W+E+ N PT+ITSA+F LR Y+
Sbjct: 246 RIPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMK 305
Query: 125 LLYHFE 130
LY +E
Sbjct: 306 YLYAYE 311
>UNIPROTKB|E2RFI5 [details] [associations]
symbol:ARID3B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0003677
GO:GO:0005622 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 InterPro:IPR023334 PROSITE:PS51486
CTD:10620 OMA:LFSMARQ EMBL:AAEX03016311 RefSeq:XP_544771.2
ProteinModelPortal:E2RFI5 Ensembl:ENSCAFT00000028463 GeneID:487646
KEGG:cfa:487646 Uniprot:E2RFI5
Length = 560
Score = 148 (57.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 65 KVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLS 124
++P + + LDL+ L+ VT +GGL ++I + W+E+ N PT+ITSA+F LR Y+
Sbjct: 239 RIPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMK 298
Query: 125 LLYHFE 130
LY +E
Sbjct: 299 YLYAYE 304
>UNIPROTKB|Q8IVW6 [details] [associations]
symbol:ARID3B "AT-rich interactive domain-containing
protein 3B" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.150.60
SUPFAM:SSF46774 eggNOG:NOG327790 HOGENOM:HOG000236281
InterPro:IPR023334 PROSITE:PS51486 EMBL:AF116846 EMBL:AB208830
EMBL:AC100835 EMBL:BC041792 IPI:IPI00328266 IPI:IPI00793438
IPI:IPI00853367 RefSeq:NP_006456.1 UniGene:Hs.655532 HSSP:Q24573
ProteinModelPortal:Q8IVW6 SMR:Q8IVW6 STRING:Q8IVW6
PhosphoSite:Q8IVW6 DMDM:152013359 PaxDb:Q8IVW6 PRIDE:Q8IVW6
Ensembl:ENST00000346246 GeneID:10620 KEGG:hsa:10620 UCSC:uc002ayc.3
UCSC:uc002ayd.3 UCSC:uc002aye.3 CTD:10620 GeneCards:GC15P074833
HGNC:HGNC:14350 MIM:612457 neXtProt:NX_Q8IVW6 PharmGKB:PA134896829
HOVERGEN:HBG103680 InParanoid:Q8IVW6 OMA:LFSMARQ GenomeRNAi:10620
NextBio:40352 ArrayExpress:Q8IVW6 Bgee:Q8IVW6 CleanEx:HS_ARID3B
Genevestigator:Q8IVW6 Uniprot:Q8IVW6
Length = 561
Score = 148 (57.2 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 65 KVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLS 124
++P + + LDL+ L+ VT +GGL ++I + W+E+ N PT+ITSA+F LR Y+
Sbjct: 238 RIPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMK 297
Query: 125 LLYHFE 130
LY +E
Sbjct: 298 YLYAYE 303
>MGI|MGI:1930768 [details] [associations]
symbol:Arid3b "AT rich interactive domain 3B (BRIGHT-like)"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 MGI:MGI:1930768 GO:GO:0007275
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
eggNOG:NOG327790 HOGENOM:HOG000236281 InterPro:IPR023334
PROSITE:PS51486 HSSP:Q24573 CTD:10620 HOVERGEN:HBG103680
OMA:LFSMARQ EMBL:AF116847 EMBL:AK139455 EMBL:BC049776
IPI:IPI00275919 IPI:IPI00277032 IPI:IPI00652493 RefSeq:NP_062663.1
UniGene:Mm.425588 ProteinModelPortal:Q9Z1N7 SMR:Q9Z1N7
IntAct:Q9Z1N7 STRING:Q9Z1N7 PhosphoSite:Q9Z1N7 PRIDE:Q9Z1N7
Ensembl:ENSMUST00000004780 Ensembl:ENSMUST00000164035
Ensembl:ENSMUST00000171444 GeneID:56380 KEGG:mmu:56380
UCSC:uc009pvt.1 UCSC:uc009pvw.1 InParanoid:Q9Z1N7 OrthoDB:EOG415GF5
NextBio:312460 Bgee:Q9Z1N7 CleanEx:MM_ARID3B Genevestigator:Q9Z1N7
Uniprot:Q9Z1N7
Length = 568
Score = 148 (57.2 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 65 KVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLS 124
++P + + LDL+ L+ VT +GGL ++I + W+E+ N PT+ITSA+F LR Y+
Sbjct: 236 RIPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMK 295
Query: 125 LLYHFE 130
LY +E
Sbjct: 296 YLYAYE 301
>UNIPROTKB|H3BQ92 [details] [associations]
symbol:ARID3B "AT-rich interactive domain-containing
protein 3B" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 GO:GO:0003677
GO:GO:0005622 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC100835
HGNC:HGNC:14350 Ensembl:ENST00000566147 Bgee:H3BQ92 Uniprot:H3BQ92
Length = 138
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 74 LDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLSLLYHFE 130
LDL+ L+ VT +GGL ++I + W+E+ N PT+ITSA+F LR Y+ LY +E
Sbjct: 6 LDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKYLYAYE 62
>UNIPROTKB|F1NAK8 [details] [associations]
symbol:LOC100858693 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0045121
"membrane raft" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 InterPro:IPR023334 PROSITE:PS51486
EMBL:AADN02068975 EMBL:AADN02068976 IPI:IPI00651600
Ensembl:ENSGALT00000009379 OMA:RQTFGTA Uniprot:F1NAK8
Length = 368
Score = 140 (54.3 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 26/66 (39%), Positives = 42/66 (63%)
Query: 65 KVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLS 124
++P + + LDL+ L+ VT +GGL +VI + W+E+ N PT+ITSA+ +R Y+
Sbjct: 112 RIPIMAKQVLDLYTLYRLVTDKGGLVEVINKKIWREITKGLNLPTSITSAALTVRTQYMK 171
Query: 125 LLYHFE 130
LY +E
Sbjct: 172 YLYPYE 177
>WB|WBGene00000476 [details] [associations]
symbol:cfi-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0045165 "cell fate commitment" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 GO:GO:0005634 GO:GO:0006355
GO:GO:0030182 GO:GO:0003677 GO:GO:0006351 GO:GO:0045165
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
eggNOG:NOG327790 InterPro:IPR023334 PROSITE:PS51486 HSSP:Q24573
EMBL:AF487547 EMBL:Z81128 EMBL:AL023824 EMBL:Z81033 PIR:T25159
RefSeq:NP_492644.2 UniGene:Cel.180 ProteinModelPortal:O02326
SMR:O02326 PaxDb:O02326 EnsemblMetazoa:T23D8.8 GeneID:188793
KEGG:cel:CELE_T23D8.8 UCSC:T23D8.8 CTD:188793 WormBase:T23D8.8
HOGENOM:HOG000017380 InParanoid:O02326 OMA:YDEENTN NextBio:940112
Uniprot:O02326
Length = 467
Score = 138 (53.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 65 KVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLS 124
++P + + LDL+ L+ V GGL ++I + W+E+ N P++ITSA+F LR Y
Sbjct: 204 RIPIMAKQVLDLYELYRLVVQHGGLVEIINKKLWREITKGLNLPSSITSAAFTLRTQYQK 263
Query: 125 LLYHFEQVYYFRKEAPSSSMPDAVSGS 151
LY +E K + S + A+ G+
Sbjct: 264 YLYDYECEK--EKLSNQSDLQQAIDGN 288
>UNIPROTKB|H9KYS8 [details] [associations]
symbol:ARID1A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001606 InterPro:IPR016024
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0005622
Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 EMBL:AADN02051965 EMBL:AADN02051964
Ensembl:ENSGALT00000000486 Uniprot:H9KYS8
Length = 1366
Score = 134 (52.2 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 66 VPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLSL 125
+P VG K LDL+RL++ V GGL +V ++++W+E+ N T+ ++AS L+K Y+
Sbjct: 132 LPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASS-LKKQYIQC 190
Query: 126 LYHFE 130
LY FE
Sbjct: 191 LYAFE 195
Score = 35 (17.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 5/22 (22%), Positives = 12/22 (54%)
Query: 143 SMPDAVSGSSLDNGSASPEEGS 164
+MP + G + + P++G+
Sbjct: 560 NMPPQMMGGPIQSAPEGPQQGA 581
>ZFIN|ZDB-GENE-080220-35 [details] [associations]
symbol:arid1aa "AT rich interactive domain 1Aa
(SWI-like)" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0030246
"carbohydrate binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 ZFIN:ZDB-GENE-080220-35 GO:GO:0003677
GO:GO:0005622 Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031
SUPFAM:SSF46774 GeneTree:ENSGT00550000074575 EMBL:BX649265
EMBL:CR524825 IPI:IPI00934197 Ensembl:ENSDART00000135930
ArrayExpress:F1QMS8 Bgee:F1QMS8 Uniprot:F1QMS8
Length = 2286
Score = 142 (55.0 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 40/109 (36%), Positives = 60/109 (55%)
Query: 47 DLFWATLEAFHKSFGDKFKVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFN 106
D + A +E K+ G +P VG K LDL RL++ V GGL +V ++++W+E+ N
Sbjct: 996 DRYLAFIE--EKAMG-MTNLPAVGRKPLDLFRLYMSVKEIGGLTQVNKNKKWRELATNLN 1052
Query: 107 FPTTITSASFVLRKYYLSLLYHFEQVYYFRKEAPSSSMPDAVSGSSLDN 155
T+ ++AS L+K Y+ LY FE R E P PD +SG + N
Sbjct: 1053 VGTSSSAASS-LKKQYIQCLYAFE-CKIERGEDPP---PDIMSGDNKKN 1096
>FB|FBgn0004795 [details] [associations]
symbol:retn "retained" species:7227 "Drosophila melanogaster"
[GO:0048477 "oogenesis" evidence=IMP] [GO:0003677 "DNA binding"
evidence=NAS;IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=NAS;IMP] [GO:0070491 "repressing transcription
factor binding" evidence=IPI] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IDA] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0009880 "embryonic pattern specification" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0007435 "salivary gland morphogenesis"
evidence=NAS] [GO:0042063 "gliogenesis" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0007431 "salivary gland development" evidence=NAS] [GO:0045924
"regulation of female receptivity" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0008049 "male courtship behavior"
evidence=IMP] InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011
SMART:SM00501 EMBL:AE013599 GO:GO:0005634 GO:GO:0007411
GO:GO:0045893 GO:GO:0009952 GO:GO:0007435 GO:GO:0048477
GO:GO:0003700 GO:GO:0006351 GO:GO:0000122 GO:GO:0007517
GO:GO:0045924 GO:GO:0008049 GO:GO:0000976 GO:GO:0009880
GO:GO:0042063 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 eggNOG:NOG327790 InterPro:IPR023334
PROSITE:PS51486 EMBL:U62542 EMBL:AY118955 PIR:JC6093
RefSeq:NP_476864.2 RefSeq:NP_788434.1 UniGene:Dm.20640 PDB:1C20
PDB:1KQQ PDBsum:1C20 PDBsum:1KQQ ProteinModelPortal:Q24573
SMR:Q24573 STRING:Q24573 PaxDb:Q24573 EnsemblMetazoa:FBtr0072073
GeneID:45976 KEGG:dme:Dmel_CG5403 CTD:56729 FlyBase:FBgn0004795
InParanoid:Q24573 OMA:MEYLQLI OrthoDB:EOG4C2FTG PhylomeDB:Q24573
EvolutionaryTrace:Q24573 GenomeRNAi:45976 NextBio:838560
Bgee:Q24573 GermOnline:CG5403 Uniprot:Q24573
Length = 911
Score = 137 (53.3 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 26/66 (39%), Positives = 42/66 (63%)
Query: 65 KVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLS 124
++P + LDL+ L+ V +RGGL VI + W+E++ + P++ITSA+F LR Y+
Sbjct: 316 RLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMK 375
Query: 125 LLYHFE 130
LY +E
Sbjct: 376 YLYPYE 381
>ZFIN|ZDB-GENE-030131-5725 [details] [associations]
symbol:arid1ab "AT rich interactive domain 1Ab
(SWI-like)" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
ZFIN:ZDB-GENE-030131-5725 GO:GO:0003677 GO:GO:0005622
Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 EMBL:CABZ01050711 EMBL:CT027837
IPI:IPI00485842 Ensembl:ENSDART00000084272 Bgee:F1RE50
Uniprot:F1RE50
Length = 2135
Score = 133 (51.9 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 55 AFHKSFGDKFKVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSA 114
A K+ G +P VG K LDL RL+V V GGL +V ++++W+E+ N T+ ++A
Sbjct: 982 AEEKAMGMS-NLPAVGRKPLDLFRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAA 1040
Query: 115 SFVLRKYYLSLLYHFE 130
S L+K Y+ LY FE
Sbjct: 1041 SS-LKKQYIQCLYAFE 1055
Score = 36 (17.7 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 140 PSS--SMPDAVSGSSLDNGSASPEEG 163
P+S SMP + GSS+ S +G
Sbjct: 1385 PNSQPSMPPQMMGSSMSGTMPSVPDG 1410
>UNIPROTKB|H0Y3S9 [details] [associations]
symbol:ARID1B "AT-rich interactive domain-containing
protein 1B" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60 SUPFAM:SSF46774
EMBL:AL355297 EMBL:AL049820 EMBL:AL162578 EMBL:AL591545
HGNC:HGNC:18040 EMBL:AL136091 Ensembl:ENST00000400790 Bgee:H0Y3S9
Uniprot:H0Y3S9
Length = 273
Score = 126 (49.4 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 66 VPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLSL 125
+P VG K LDL RL+V V GGL +V ++++W+E+ N T+ ++AS L+K Y+
Sbjct: 144 LPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASS-LKKQYIQY 202
Query: 126 LYHFE 130
L+ FE
Sbjct: 203 LFAFE 207
>UNIPROTKB|J9NTN3 [details] [associations]
symbol:ARID1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0003677
GO:GO:0005622 Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031
SUPFAM:SSF46774 GeneTree:ENSGT00550000074575 EMBL:AAEX03001719
Ensembl:ENSCAFT00000044234 Uniprot:J9NTN3
Length = 1899
Score = 137 (53.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 36/96 (37%), Positives = 55/96 (57%)
Query: 66 VPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLSL 125
+P VG K LDL+RL+V V GGL +V ++++W+E+ N T+ ++AS L+K Y+
Sbjct: 658 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASS-LKKQYIQC 716
Query: 126 LYHFEQVYYFRKEAPSSSMPDAVSGSSLDNGSASPE 161
LY FE R E P PD + S D+ + P+
Sbjct: 717 LYAFE-CKIERGEDPP---PDIFAAS--DSKKSQPK 746
>UNIPROTKB|E2RSH9 [details] [associations]
symbol:ARID1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0003677
GO:GO:0005622 OMA:GSQYGPQ Gene3D:1.10.150.60 InterPro:IPR021906
Pfam:PF12031 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
EMBL:AAEX03001719 Ensembl:ENSCAFT00000019631 Uniprot:E2RSH9
Length = 2286
Score = 137 (53.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 36/96 (37%), Positives = 55/96 (57%)
Query: 66 VPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLSL 125
+P VG K LDL+RL+V V GGL +V ++++W+E+ N T+ ++AS L+K Y+
Sbjct: 1042 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASS-LKKQYIQC 1100
Query: 126 LYHFEQVYYFRKEAPSSSMPDAVSGSSLDNGSASPE 161
LY FE R E P PD + S D+ + P+
Sbjct: 1101 LYAFE-CKIERGEDPP---PDIFAAS--DSKKSQPK 1130
>UNIPROTKB|E1B925 [details] [associations]
symbol:ARID1A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0042921
"glucocorticoid receptor signaling pathway" evidence=IEA]
[GO:0030521 "androgen receptor signaling pathway" evidence=IEA]
[GO:0030520 "intracellular estrogen receptor signaling pathway"
evidence=IEA] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006337
"nucleosome disassembly" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
GO:GO:0042921 GO:GO:0045893 GO:GO:0030521 GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0016514 OMA:GSQYGPQ GO:GO:0030520
GO:GO:0006337 Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031
SUPFAM:SSF46774 GeneTree:ENSGT00550000074575 EMBL:DAAA02006369
EMBL:DAAA02006370 EMBL:DAAA02006371 IPI:IPI01000128
Ensembl:ENSBTAT00000001360 Uniprot:E1B925
Length = 2112
Score = 135 (52.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 66 VPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLSL 125
+P VG K LDL+RL+V V GGL +V ++++W+E+ N T+ ++AS L+K Y+
Sbjct: 869 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASS-LKKQYIQC 927
Query: 126 LYHFE 130
LY FE
Sbjct: 928 LYAFE 932
>MGI|MGI:1935147 [details] [associations]
symbol:Arid1a "AT rich interactive domain 1A (SWI-like)"
species:10090 "Mus musculus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006325
"chromatin organization" evidence=IPI] [GO:0006337 "nucleosome
disassembly" evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=ISO;IDA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=ISO] [GO:0030520 "intracellular estrogen receptor
signaling pathway" evidence=ISO] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISO] [GO:0042921 "glucocorticoid
receptor signaling pathway" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=IDA] [GO:0071565 "nBAF
complex" evidence=IDA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 MGI:MGI:1935147 GO:GO:0045893
GO:GO:0007399 GO:GO:0030521 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
eggNOG:NOG12793 CTD:8289 HOVERGEN:HBG058196 KO:K11653
OrthoDB:EOG437RD2 ChiTaRS:ARID1A GO:GO:0030520 Gene3D:1.10.150.60
InterPro:IPR021906 Pfam:PF12031 SUPFAM:SSF46774 EMBL:AF268912
EMBL:CR751606 EMBL:BX537327 EMBL:CR925752 EMBL:BC082554
IPI:IPI00127131 IPI:IPI00955140 IPI:IPI00955160 IPI:IPI00974963
RefSeq:NP_001074288.1 UniGene:Mm.22478 ProteinModelPortal:A2BH40
SMR:A2BH40 DIP:DIP-58952N IntAct:A2BH40 MINT:MINT-4301934
STRING:A2BH40 PhosphoSite:A2BH40 PaxDb:A2BH40 PRIDE:A2BH40
Ensembl:ENSMUST00000008024 Ensembl:ENSMUST00000105897 GeneID:93760
KEGG:mmu:93760 UCSC:uc008vdh.1 UCSC:uc008vdj.1
GeneTree:ENSGT00550000074575 HOGENOM:HOG000232161 InParanoid:A2BH40
NextBio:351643 Bgee:A2BH40 Genevestigator:A2BH40 GO:GO:0006325
Uniprot:A2BH40
Length = 2283
Score = 135 (52.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 66 VPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLSL 125
+P VG K LDL+RL+V V GGL +V ++++W+E+ N T+ ++AS L+K Y+
Sbjct: 1042 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASS-LKKQYIQC 1100
Query: 126 LYHFE 130
LY FE
Sbjct: 1101 LYAFE 1105
>UNIPROTKB|O14497 [details] [associations]
symbol:ARID1A "AT-rich interactive domain-containing
protein 1A" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=NAS]
[GO:0042921 "glucocorticoid receptor signaling pathway"
evidence=IDA] [GO:0048096 "chromatin-mediated maintenance of
transcription" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA;TAS] [GO:0016514 "SWI/SNF complex" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0030521 "androgen receptor signaling pathway"
evidence=IDA] [GO:0030520 "intracellular estrogen receptor
signaling pathway" evidence=IDA] [GO:0042766 "nucleosome
mobilization" evidence=TAS] [GO:0071564 "npBAF complex"
evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0003713 "transcription coactivator activity" evidence=NAS]
[GO:0006337 "nucleosome disassembly" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IDA] [GO:0016922 "ligand-dependent
nuclear receptor binding" evidence=IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
GO:GO:0042921 EMBL:AL034380 GO:GO:0007399 GO:GO:0030521
GO:GO:0003677 EMBL:CH471059 GO:GO:0006357 GO:GO:0006351
GO:GO:0000790 GO:GO:0003713 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 eggNOG:NOG12793 EMBL:AF231056 EMBL:AL512408
EMBL:AF521670 EMBL:AF219114 EMBL:AF265208 EMBL:AB001895
EMBL:AB024075 EMBL:AF268913 EMBL:AK223275 IPI:IPI00642705
IPI:IPI00643722 IPI:IPI00929427 PIR:T00022 RefSeq:NP_006006.3
RefSeq:NP_624361.1 UniGene:Hs.468972 PDB:1RYU PDBsum:1RYU
ProteinModelPortal:O14497 SMR:O14497 DIP:DIP-33016N IntAct:O14497
STRING:O14497 PhosphoSite:O14497 PaxDb:O14497 PRIDE:O14497
Ensembl:ENST00000324856 Ensembl:ENST00000374152
Ensembl:ENST00000457599 GeneID:8289 KEGG:hsa:8289 UCSC:uc001bmt.1
UCSC:uc001bmu.1 UCSC:uc001bmx.1 CTD:8289 GeneCards:GC01P027022
HGNC:HGNC:11110 HPA:CAB016334 HPA:HPA005456 MIM:603024 MIM:614607
neXtProt:NX_O14497 Orphanet:1465 PharmGKB:PA35960
HOVERGEN:HBG058196 InParanoid:O14497 KO:K11653 OMA:GSQYGPQ
OrthoDB:EOG437RD2 PhylomeDB:O14497 ChiTaRS:ARID1A
EvolutionaryTrace:O14497 GenomeRNAi:8289 NextBio:31061
ArrayExpress:O14497 Bgee:O14497 Genevestigator:O14497
GermOnline:ENSG00000117713 GO:GO:0048096 GO:GO:0030520
GO:GO:0006337 GO:GO:0042766 Gene3D:1.10.150.60 InterPro:IPR021906
Pfam:PF12031 SUPFAM:SSF46774 Uniprot:O14497
Length = 2285
Score = 135 (52.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 66 VPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLSL 125
+P VG K LDL+RL+V V GGL +V ++++W+E+ N T+ ++AS L+K Y+
Sbjct: 1041 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASS-LKKQYIQC 1099
Query: 126 LYHFE 130
LY FE
Sbjct: 1100 LYAFE 1104
>RGD|1310500 [details] [associations]
symbol:Arid1a "AT rich interactive domain 1A (SWI-like)"
species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006325 "chromatin
organization" evidence=ISO] [GO:0006337 "nucleosome disassembly"
evidence=IEA;ISO] [GO:0006338 "chromatin remodeling"
evidence=IEA;ISO] [GO:0016514 "SWI/SNF complex" evidence=IEA;ISO]
[GO:0016922 "ligand-dependent nuclear receptor binding"
evidence=IEA;ISO] [GO:0030520 "intracellular estrogen receptor
signaling pathway" evidence=IEA;ISO] [GO:0030521 "androgen receptor
signaling pathway" evidence=IEA;ISO] [GO:0042921 "glucocorticoid
receptor signaling pathway" evidence=IEA;ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0071564 "npBAF complex" evidence=IEA;ISO] [GO:0071565 "nBAF
complex" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
RGD:1310500 GO:GO:0042921 GO:GO:0045893 GO:GO:0030521 GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0016514 OrthoDB:EOG437RD2
GO:GO:0030520 GO:GO:0006337 Gene3D:1.10.150.60 InterPro:IPR021906
Pfam:PF12031 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
IPI:IPI00768472 Ensembl:ENSRNOT00000009173 UCSC:RGD:1310500
Uniprot:D4A3E3
Length = 2291
Score = 135 (52.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 66 VPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLSL 125
+P VG K LDL+RL+V V GGL +V ++++W+E+ N T+ ++AS L+K Y+
Sbjct: 1038 LPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASS-LKKQYIQC 1096
Query: 126 LYHFE 130
LY FE
Sbjct: 1097 LYAFE 1101
>DICTYBASE|DDB_G0275333 [details] [associations]
symbol:DDB_G0275333 "ARID/BRIGHT DNA binding
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0005622 "intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR001606 InterPro:IPR025718 Pfam:PF01388 Pfam:PF13867
PROSITE:PS51011 SMART:SM00501 dictyBase:DDB_G0275333 GO:GO:0005634
GO:GO:0003677 EMBL:AAFI02000013 Gene3D:1.10.150.60 SUPFAM:SSF46774
eggNOG:NOG327790 RefSeq:XP_643660.1 ProteinModelPortal:Q553R0
EnsemblProtists:DDB0216390 GeneID:8619925 KEGG:ddi:DDB_G0275333
InParanoid:Q553R0 Uniprot:Q553R0
Length = 478
Score = 124 (48.7 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 65 KVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLS 124
K+P K L+L++L+ V SRGGL VI ++ W+++ T A F LR +YL
Sbjct: 65 KIPIFDHKELNLYKLYNCVISRGGLEAVIDNKLWRQITTDLAVDPERTDAGFRLRIHYLK 124
Query: 125 LLYHFEQVYYFRKE 138
LY +E+ +Y + E
Sbjct: 125 YLYPYERKHYLKIE 138
>UNIPROTKB|F1SB28 [details] [associations]
symbol:ARID1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003677 GO:GO:0016514 Gene3D:1.10.150.60 InterPro:IPR021906
Pfam:PF12031 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
EMBL:CU407155 Ensembl:ENSSSCT00000004493 OMA:KMAGADP Uniprot:F1SB28
Length = 1292
Score = 129 (50.5 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 66 VPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLSL 125
+P VG K LDL RL+V V GGL +V ++++W+E+ N T+ ++AS L+K Y+
Sbjct: 131 LPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATTLNVGTSSSAASS-LKKQYIQY 189
Query: 126 LYHFE 130
L+ FE
Sbjct: 190 LFAFE 194
>UNIPROTKB|H0Y2R3 [details] [associations]
symbol:ARID1B "AT-rich interactive domain-containing
protein 1B" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AL355297
EMBL:AL049820 EMBL:AL162578 EMBL:AL591545 HGNC:HGNC:18040
EMBL:AL136091 Ensembl:ENST00000319584 Bgee:H0Y2R3 Uniprot:H0Y2R3
Length = 728
Score = 126 (49.4 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 66 VPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLSL 125
+P VG K LDL RL+V V GGL +V ++++W+E+ N T+ ++AS L+K Y+
Sbjct: 552 LPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASS-LKKQYIQY 610
Query: 126 LYHFE 130
L+ FE
Sbjct: 611 LFAFE 615
>TAIR|locus:2037345 [details] [associations]
symbol:AT1G20910 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0043687 "post-translational
protein modification" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
InterPro:IPR002068 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
InterPro:IPR008978 SUPFAM:SSF49764 PROSITE:PS01031
Gene3D:1.10.150.60 SUPFAM:SSF46774 ProtClustDB:CLSN2680092
EMBL:AC007369 EMBL:AB493470 IPI:IPI00543271 PIR:G86341
RefSeq:NP_173515.2 UniGene:At.43690 ProteinModelPortal:C0SUW7
SMR:C0SUW7 PaxDb:C0SUW7 PRIDE:C0SUW7 EnsemblPlants:AT1G20910.1
GeneID:838684 KEGG:ath:AT1G20910 TAIR:At1g20910 eggNOG:NOG284320
HOGENOM:HOG000239411 OMA:ANNGHGM PhylomeDB:C0SUW7
Genevestigator:C0SUW7 Uniprot:C0SUW7
Length = 398
Score = 122 (48.0 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 35/118 (29%), Positives = 60/118 (50%)
Query: 49 FWATLEAFHKSFGDKFKVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFP 108
F +EAF+K +FK P G+ L++ +L+ V + GG V ++ W++V FN P
Sbjct: 112 FLREVEAFYKESFLEFKPPKFYGQPLNILKLWRAVVNLGGYEVVTTNKLWRQVGESFNPP 171
Query: 109 TTITSASFVLRKYYLSLLYHFEQVYYFRKEA--PSSSMPDAVSGSSLDNGSASPEEGS 164
T T+ S+ R +Y L +E+ E P S++ + SS++ +S +GS
Sbjct: 172 KTCTTVSYTFRNFYEKALLEYEKCLRNNGELNLPGSTL---ILSSSVEKEPSS-HQGS 225
>UNIPROTKB|F1P479 [details] [associations]
symbol:Gga.35990 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60 InterPro:IPR021906
Pfam:PF12031 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
EMBL:AADN02025422 EMBL:AADN02025423 IPI:IPI00814474
Ensembl:ENSGALT00000022247 ArrayExpress:F1P479 Uniprot:F1P479
Length = 1614
Score = 129 (50.5 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 66 VPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLSL 125
+P VG K LDL RL+V V GGL +V ++++W+E+ N T+ ++AS L+K Y+
Sbjct: 410 LPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATTLNVGTSSSAASS-LKKQYIQY 468
Query: 126 LYHFE 130
L+ FE
Sbjct: 469 LFAFE 473
>UNIPROTKB|F1NKI7 [details] [associations]
symbol:Gga.35990 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60 InterPro:IPR021906
Pfam:PF12031 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
OMA:PIGIQGR EMBL:AADN02025422 EMBL:AADN02025423 IPI:IPI00818092
Ensembl:ENSGALT00000037541 ArrayExpress:F1NKI7 Uniprot:F1NKI7
Length = 1618
Score = 129 (50.5 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 66 VPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLSL 125
+P VG K LDL RL+V V GGL +V ++++W+E+ N T+ ++AS L+K Y+
Sbjct: 410 LPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATTLNVGTSSSAASS-LKKQYIQY 468
Query: 126 LYHFE 130
L+ FE
Sbjct: 469 LFAFE 473
>FB|FBgn0042085 [details] [associations]
symbol:Bap170 "Brahma associated protein 170kD" species:7227
"Drosophila melanogaster" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0035060 "brahma complex" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=IC]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] [GO:0005700 "polytene chromosome" evidence=IDA]
[GO:0007480 "imaginal disc-derived leg morphogenesis"
evidence=IGI;IMP] [GO:0031936 "negative regulation of chromatin
silencing" evidence=IGI] [GO:0050821 "protein stabilization"
evidence=IMP] [GO:0008587 "imaginal disc-derived wing margin
morphogenesis" evidence=IMP] [GO:0008586 "imaginal disc-derived
wing vein morphogenesis" evidence=IMP] [GO:0042059 "negative
regulation of epidermal growth factor receptor signaling pathway"
evidence=IGI] InterPro:IPR001606 InterPro:IPR003150
InterPro:IPR015880 Pfam:PF01388 PROSITE:PS51011 PROSITE:PS51526
SMART:SM00355 EMBL:AE013599 GO:GO:0050821 GO:GO:0006911
GO:GO:0003677 GO:GO:0008586 GO:GO:0008270 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0031936 GO:GO:0005700 GO:GO:0007480
GO:GO:0042059 Gene3D:1.10.150.60 SUPFAM:SSF46774 eggNOG:NOG311317
KO:K11765 GO:GO:0008587 GO:GO:0035060 GeneTree:ENSGT00390000016138
RefSeq:NP_610216.1 ProteinModelPortal:A1Z6M0 SMR:A1Z6M0
STRING:A1Z6M0 PaxDb:A1Z6M0 PRIDE:A1Z6M0 EnsemblMetazoa:FBtr0086107
GeneID:35560 KEGG:dme:Dmel_CG3274 UCSC:CG3274-RA CTD:35560
FlyBase:FBgn0042085 InParanoid:A1Z6M0 OMA:HAIKRHA OrthoDB:EOG4HDR8G
PhylomeDB:A1Z6M0 GenomeRNAi:35560 NextBio:794035 Bgee:A1Z6M0
Uniprot:A1Z6M0
Length = 1688
Score = 121 (47.7 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 30/104 (28%), Positives = 50/104 (48%)
Query: 38 KYEDIAQSS-DLFWATLEAFHKSFGDKFKVPT-VGGKALDLHRLFVEVTSRGGLGKVIRD 95
K E++ S + FW L+ FH+ G P + GK +DL++L+ EVT RGG KV
Sbjct: 57 KVEEMPPSPPEEFWRDLQQFHERRGTPLTQPARISGKHVDLYKLYNEVTERGGFNKVTMR 116
Query: 96 RRWKEVVVVFN-FPTTITSASFVLRKYYLSLLYHFEQVYYFRKE 138
W EV + + ++ Y L +E++ +F ++
Sbjct: 117 DEWDEVYSAMETLRERCVNGTASIKHIYRRYLDKYERLNFFGED 160
Score = 35 (17.4 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 153 LDNGSASPEEG 163
LDNG S E+G
Sbjct: 336 LDNGLISKEDG 346
Score = 34 (17.0 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 136 RKEAPSSSMPDAVSGSSLDNGSASPEEGSTINQ 168
R E + + +GS SA P GS Q
Sbjct: 1577 RNEGHAQRLAGGATGSPSGPASAVPVVGSAAMQ 1609
>UNIPROTKB|E1BKQ8 [details] [associations]
symbol:Bt.110992 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60 InterPro:IPR021906
Pfam:PF12031 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
EMBL:DAAA02027298 EMBL:DAAA02027299 EMBL:DAAA02027300
EMBL:DAAA02027301 EMBL:DAAA02027302 EMBL:DAAA02027303
EMBL:DAAA02027304 EMBL:DAAA02027305 IPI:IPI00923955
Ensembl:ENSBTAT00000003537 Uniprot:E1BKQ8
Length = 1537
Score = 126 (49.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 66 VPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLSL 125
+P VG K LDL RL+V V GGL +V ++++W+E+ N T+ ++AS L+K Y+
Sbjct: 221 LPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASS-LKKQYIQY 279
Query: 126 LYHFE 130
L+ FE
Sbjct: 280 LFAFE 284
>UNIPROTKB|F1MKU0 [details] [associations]
symbol:Bt.110992 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003677 GO:GO:0016514 Gene3D:1.10.150.60
InterPro:IPR021906 Pfam:PF12031 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 OMA:PIGIQGR EMBL:DAAA02027298
EMBL:DAAA02027299 EMBL:DAAA02027300 EMBL:DAAA02027301
EMBL:DAAA02027302 EMBL:DAAA02027303 EMBL:DAAA02027304
EMBL:DAAA02027305 IPI:IPI00923955 Ensembl:ENSBTAT00000061484
Uniprot:F1MKU0
Length = 1628
Score = 126 (49.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 66 VPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLSL 125
+P VG K LDL RL+V V GGL +V ++++W+E+ N T+ ++AS L+K Y+
Sbjct: 470 LPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASS-LKKQYIQY 528
Query: 126 LYHFE 130
L+ FE
Sbjct: 529 LFAFE 533
>UNIPROTKB|F1LNP1 [details] [associations]
symbol:F1LNP1 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0003677
GO:GO:0016514 Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031
SUPFAM:SSF46774 GeneTree:ENSGT00550000074575 IPI:IPI00193175
Ensembl:ENSRNOT00000022939 Uniprot:F1LNP1
Length = 1755
Score = 126 (49.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 66 VPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLSL 125
+P VG K LDL RL+V V GGL +V ++++W+E+ N T+ ++AS L+K Y+
Sbjct: 588 LPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASS-LKKQYIQY 646
Query: 126 LYHFE 130
L+ FE
Sbjct: 647 LFAFE 651
>UNIPROTKB|H0Y7H8 [details] [associations]
symbol:ARID1B "AT-rich interactive domain-containing
protein 1B" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0005634
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677
Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031 SUPFAM:SSF46774
EMBL:AL355297 EMBL:AL049820 EMBL:AL162578 EMBL:AL591545
HGNC:HGNC:18040 EMBL:AL136091 Ensembl:ENST00000414678 Bgee:H0Y7H8
Uniprot:H0Y7H8
Length = 1758
Score = 126 (49.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 66 VPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLSL 125
+P VG K LDL RL+V V GGL +V ++++W+E+ N T+ ++AS L+K Y+
Sbjct: 599 LPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASS-LKKQYIQY 657
Query: 126 LYHFE 130
L+ FE
Sbjct: 658 LFAFE 662
>UNIPROTKB|G3XAA0 [details] [associations]
symbol:ARID1B "AT rich interactive domain 1B (SWI1-like),
isoform CRA_a" species:9606 "Homo sapiens" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0005634
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 EMBL:CH471051
Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031 SUPFAM:SSF46774
EMBL:AL355297 EMBL:AL049820 EMBL:AL162578 EMBL:AL591545
UniGene:Hs.291587 UniGene:Hs.741783 HGNC:HGNC:18040 EMBL:AL136091
ProteinModelPortal:G3XAA0 SMR:G3XAA0 PRIDE:G3XAA0
Ensembl:ENST00000275248 PhylomeDB:G3XAA0 ArrayExpress:G3XAA0
Bgee:G3XAA0 Uniprot:G3XAA0
Length = 2231
Score = 126 (49.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 66 VPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLSL 125
+P VG K LDL RL+V V GGL +V ++++W+E+ N T+ ++AS L+K Y+
Sbjct: 1072 LPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASS-LKKQYIQY 1130
Query: 126 LYHFE 130
L+ FE
Sbjct: 1131 LFAFE 1135
>UNIPROTKB|Q8NFD5 [details] [associations]
symbol:ARID1B "AT-rich interactive domain-containing
protein 1B" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=NAS] [GO:0016514 "SWI/SNF complex" evidence=IDA]
[GO:0048096 "chromatin-mediated maintenance of transcription"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 GO:GO:0007399 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003677 GO:GO:0006351 GO:GO:0003713
GO:GO:0016514 eggNOG:NOG12793 Orphanet:1465 HOVERGEN:HBG058196
KO:K11653 GO:GO:0048096 Gene3D:1.10.150.60 InterPro:IPR021906
Pfam:PF12031 SUPFAM:SSF46774 EMBL:AF259792 EMBL:AL355297
EMBL:AL049820 EMBL:AL162578 EMBL:AL591545 EMBL:AJ001216 EMBL:Y08266
EMBL:AF521671 EMBL:AF253515 EMBL:AF468300 EMBL:AB033061
IPI:IPI00015404 IPI:IPI00395617 IPI:IPI00396577 IPI:IPI00742937
RefSeq:NP_059989.2 RefSeq:NP_065783.3 UniGene:Hs.291587
UniGene:Hs.741783 PDB:2CXY PDB:2EH9 PDBsum:2CXY PDBsum:2EH9
ProteinModelPortal:Q8NFD5 SMR:Q8NFD5 IntAct:Q8NFD5
MINT:MINT-1153351 STRING:Q8NFD5 PhosphoSite:Q8NFD5 DMDM:73921720
PaxDb:Q8NFD5 PRIDE:Q8NFD5 Ensembl:ENST00000346085
Ensembl:ENST00000350026 Ensembl:ENST00000367148 GeneID:57492
KEGG:hsa:57492 UCSC:uc003qqn.3 UCSC:uc003qqo.3 UCSC:uc003qqp.3
CTD:57492 GeneCards:GC06P157191 H-InvDB:HIX0006320
H-InvDB:HIX0165033 HGNC:HGNC:18040 HPA:HPA016511 MIM:614556
MIM:614562 neXtProt:NX_Q8NFD5 Orphanet:251056 PharmGKB:PA134909463
OMA:PIGIQGR OrthoDB:EOG4G7BXG EvolutionaryTrace:Q8NFD5
GenomeRNAi:57492 NextBio:63782 ArrayExpress:Q8NFD5 Bgee:Q8NFD5
CleanEx:HS_ARID1B Genevestigator:Q8NFD5 GermOnline:ENSG00000049618
Uniprot:Q8NFD5
Length = 2236
Score = 126 (49.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 66 VPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLSL 125
+P VG K LDL RL+V V GGL +V ++++W+E+ N T+ ++AS L+K Y+
Sbjct: 1077 LPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASS-LKKQYIQY 1135
Query: 126 LYHFE 130
L+ FE
Sbjct: 1136 LFAFE 1140
>UNIPROTKB|F1PBJ5 [details] [associations]
symbol:ARID1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0003677
GO:GO:0005622 Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031
SUPFAM:SSF46774 GeneTree:ENSGT00550000074575 OMA:PIGIQGR
EMBL:AAEX03000290 EMBL:AAEX03000291 EMBL:AAEX03000292
EMBL:AAEX03000293 Ensembl:ENSCAFT00000000940 Uniprot:F1PBJ5
Length = 2241
Score = 126 (49.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 66 VPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLSL 125
+P VG K LDL RL+V V GGL +V ++++W+E+ N T+ ++AS L+K Y+
Sbjct: 1083 LPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASS-LKKQYIQY 1141
Query: 126 LYHFE 130
L+ FE
Sbjct: 1142 LFAFE 1146
>FB|FBgn0261885 [details] [associations]
symbol:osa "osa" species:7227 "Drosophila melanogaster"
[GO:0046530 "photoreceptor cell differentiation" evidence=IMP]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IMP] [GO:0008587 "imaginal disc-derived
wing margin morphogenesis" evidence=IMP] [GO:0007379 "segment
specification" evidence=IMP] [GO:0003677 "DNA binding"
evidence=ISS;IDA;NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA;IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0035060 "brahma
complex" evidence=IDA;TAS] [GO:0003713 "transcription coactivator
activity" evidence=IC] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0048190 "wing disc dorsal/ventral
pattern formation" evidence=IGI] [GO:0042058 "regulation of
epidermal growth factor receptor signaling pathway" evidence=IMP]
[GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IMP]
[GO:0008586 "imaginal disc-derived wing vein morphogenesis"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
EMBL:AE014297 GO:GO:0048190 GO:GO:0045893 GO:GO:0016055
GO:GO:0003677 GO:GO:0008586 GO:GO:0006351 GO:GO:0016568
eggNOG:NOG12793 GO:GO:0007379 GO:GO:0007480 KO:K11653
Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 GO:GO:0046530 GO:GO:0008587
GO:GO:0035060 GO:GO:0042058 EMBL:AF053091 PIR:T13049
RefSeq:NP_001163639.1 RefSeq:NP_524392.2 RefSeq:NP_732263.1
UniGene:Dm.2989 ProteinModelPortal:Q8IN94 SMR:Q8IN94 DIP:DIP-20699N
IntAct:Q8IN94 MINT:MINT-297379 STRING:Q8IN94 PaxDb:Q8IN94
PRIDE:Q8IN94 EnsemblMetazoa:FBtr0089581 EnsemblMetazoa:FBtr0301487
GeneID:42130 KEGG:dme:Dmel_CG7467 CTD:42130 FlyBase:FBgn0261885
InParanoid:Q8IN94 OMA:SQMGQGP OrthoDB:EOG4MCVF9 PhylomeDB:Q8IN94
ChiTaRS:osa GenomeRNAi:42130 NextBio:827314 Bgee:Q8IN94
GermOnline:CG7467 Uniprot:Q8IN94
Length = 2716
Score = 120 (47.3 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 30/100 (30%), Positives = 52/100 (52%)
Query: 67 PTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLSLL 126
PT+ + LDL+RL++ V RGG +V + + WK++ + + +SA++ LRK+Y L
Sbjct: 1025 PTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIAGLLGIGAS-SSAAYTLRKHYTKNL 1083
Query: 127 YHFEQVYYFRKEA-PSSSMPDAVSGSSLDNGSAS--PEEG 163
FE ++ R + P + +GS A+ P G
Sbjct: 1084 LTFE-CHFDRGDIDPLPIIQQVEAGSKKKTAKAASVPSPG 1122
>UNIPROTKB|G4N2P7 [details] [associations]
symbol:MGG_04878 "Lid2 complex component lid2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00184
SMART:SM00249 SMART:SM00501 SMART:SM00558 GO:GO:0005634
EMBL:CM001233 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 RefSeq:XP_003712359.1 EnsemblFungi:MGG_04878T0
GeneID:2675627 KEGG:mgr:MGG_04878 Uniprot:G4N2P7
Length = 1755
Score = 118 (46.6 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 37/118 (31%), Positives = 54/118 (45%)
Query: 53 LEAFHKSFGDKFKVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTIT 112
L FH G + ++P V K LDL++L V +RGG KV + ++W E+ + I
Sbjct: 170 LVKFHNQNGKEIRLPYVDKKPLDLYKLKKAVENRGGFDKVCKSKKWAEIGRDLGYSGKIM 229
Query: 113 SA-SFVLRKYYLSLLYHFEQVYYFRKEAPSSSMP-DAVSGSSLDNGSA-SPEEGSTIN 167
S+ S L+ Y L +E+ Y R P + G L A SP + S IN
Sbjct: 230 SSLSTSLKNSYQKFLCPYEE--YLRAARPGVHQQLELEYGGPLTPSPAPSPMKKSNIN 285
>WB|WBGene00002717 [details] [associations]
symbol:let-526 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0001703 "gastrulation with mouth forming first" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0007413 "axonal fasciculation"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011
SMART:SM00501 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0018991 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0003677 GO:GO:0010171 GO:GO:0040011
GO:GO:0005622 GO:GO:0040035 eggNOG:NOG12793 GO:GO:0007413
GO:GO:0040027 Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031
SUPFAM:SSF46774 GeneTree:ENSGT00550000074575 GO:GO:0001703
EMBL:FO080267 RefSeq:NP_491562.3 PaxDb:P91019 PRIDE:P91019
EnsemblMetazoa:C01G8.9a GeneID:3565337 KEGG:cel:CELE_C01G8.9
CTD:3565337 WormBase:C01G8.9a HOGENOM:HOG000019682
InParanoid:P91019 OMA:CESETEP NextBio:956091 ArrayExpress:P91019
Uniprot:P91019
Length = 1687
Score = 111 (44.1 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 26/76 (34%), Positives = 44/76 (57%)
Query: 49 FWATLEAFHKSFGDKFK-VPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNF 107
F+ L F + G+ VP V +++DLHRL++ V ++GG +V +D+ WK + N
Sbjct: 268 FFERLIEFCEHNGEPLTMVPQVSKQSIDLHRLYIGVRAKGGFQQVTKDKYWKNLCTEANP 327
Query: 108 PTTITSAS-FVLRKYY 122
+SA+ + LRK+Y
Sbjct: 328 DLAESSAAGYQLRKHY 343
Score = 42 (19.8 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 16/44 (36%), Positives = 19/44 (43%)
Query: 139 APSSS-MPDAVSGSSLDNGSASPEEGSTINQLGGQGMFHPRHFI 181
APS+S P +GS L N A+P G M H H I
Sbjct: 840 APSTSTQPTPTTGSYLANTLATP--GPA--HAPSSSMSHAHHVI 879
Score = 36 (17.7 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 6/8 (75%), Positives = 6/8 (75%)
Query: 32 YPPPTAKY 39
YPPP A Y
Sbjct: 95 YPPPGAPY 102
Score = 35 (17.4 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 33 PPPTAKYEDIAQ 44
PPP YE AQ
Sbjct: 14 PPPQQPYEHPAQ 25
>FB|FBgn0031759 [details] [associations]
symbol:lid "little imaginal discs" species:7227 "Drosophila
melanogaster" [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IMP] [GO:0043992
"histone acetyltransferase activity (H3-K9 specific)" evidence=IMP]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IMP] [GO:0034720 "histone H3-K4 demethylation"
evidence=IMP] [GO:0043970 "histone H3-K9 acetylation" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0045475 "locomotor rhythm" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0007275 GO:GO:0045893 EMBL:AE014134
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 GO:GO:0045475 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0070822 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 OMA:TEMVERE
EMBL:AY095051 RefSeq:NP_001245908.1 RefSeq:NP_001245909.1
RefSeq:NP_001245910.1 RefSeq:NP_523486.1 RefSeq:NP_723140.1
UniGene:Dm.2779 PDB:2LM1 PDBsum:2LM1 ProteinModelPortal:Q9VMJ7
SMR:Q9VMJ7 DIP:DIP-29330N IntAct:Q9VMJ7 MINT:MINT-1672742
STRING:Q9VMJ7 PaxDb:Q9VMJ7 PRIDE:Q9VMJ7 EnsemblMetazoa:FBtr0079231
EnsemblMetazoa:FBtr0079232 EnsemblMetazoa:FBtr0307069
EnsemblMetazoa:FBtr0307070 EnsemblMetazoa:FBtr0307071 GeneID:33837
KEGG:dme:Dmel_CG9088 CTD:33837 FlyBase:FBgn0031759
InParanoid:Q9VMJ7 OrthoDB:EOG408KPT PhylomeDB:Q9VMJ7
GenomeRNAi:33837 NextBio:785524 Bgee:Q9VMJ7 GO:GO:0043992
Uniprot:Q9VMJ7
Length = 1838
Score = 115 (45.5 bits), Expect = 0.00024, P = 0.00024
Identities = 32/98 (32%), Positives = 49/98 (50%)
Query: 49 FWATLEAFHKSFGDKFKVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFP 108
F + F + G K+P V KALDL+ L V GG+ + +DR+W +V +P
Sbjct: 232 FLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKDRKWAKVANRMQYP 291
Query: 109 TTITSASFVLRKYYLSLLYHFEQVYYFRK---EAPSSS 143
++ S L+ +Y +L+ FE VY K P+SS
Sbjct: 292 SS-KSVGATLKAHYERILHPFE-VYTSGKVLGPTPTSS 327
>UNIPROTKB|C9JGA3 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 PROSITE:PS50016
PROSITE:PS51011 SMART:SM00249 SMART:SM00501 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AC010889 HGNC:HGNC:11115 ChiTaRS:KDM5D
IPI:IPI00644852 ProteinModelPortal:C9JGA3 SMR:C9JGA3 STRING:C9JGA3
Ensembl:ENST00000447300 HOGENOM:HOG000174636 ArrayExpress:C9JGA3
Bgee:C9JGA3 Uniprot:C9JGA3
Length = 425
Score = 109 (43.4 bits), Expect = 0.00031, P = 0.00031
Identities = 26/86 (30%), Positives = 38/86 (44%)
Query: 61 GDKFKVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRK 120
G K+P V K LDL+ L V GG + +DRRW V ++P S +LR
Sbjct: 97 GSSLKIPNVERKILDLYSLSKIVIEEGGYEAICKDRRWARVAQRLHYPPGKNIGS-LLRS 155
Query: 121 YYLSLLYHFEQVYYFRKEAPSSSMPD 146
+Y ++Y +E P + D
Sbjct: 156 HYERIIYPYEMFQSGANHVPEPTEED 181
>UNIPROTKB|F1NN75 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:AADN02006480
IPI:IPI00571489 Ensembl:ENSGALT00000021199 Uniprot:F1NN75
Length = 1696
Score = 114 (45.2 bits), Expect = 0.00031, P = 0.00031
Identities = 34/125 (27%), Positives = 60/125 (48%)
Query: 49 FWATLEAFHKSFGDKFKVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNF- 107
F L F + G K+P V K LDL+ L V +GG V ++++W +V +
Sbjct: 94 FLDQLAKFWELQGSNLKIPVVERKILDLYGLSKIVAGKGGFEVVTKEKKWSKVASRLGYL 153
Query: 108 PTTITSASFVLRKYYLSLLYHFEQ----VYYFRKEAPSSSMPDAVSGSSLDNGS-ASPEE 162
P T + +L+ +Y +LY +E V + P+ ++ + V L + + SP++
Sbjct: 154 PGKGTGS--LLKSHYERILYPYELFQSGVSLMGIQKPNLNLKEKVEAEDLSSDAQTSPKQ 211
Query: 163 GSTIN 167
GS +N
Sbjct: 212 GSRMN 216
>TAIR|locus:2827523 [details] [associations]
symbol:AT2G17410 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
Pfam:PF00011 InterPro:IPR002068 GO:GO:0005634 EMBL:CP002685
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 InterPro:IPR008978
SUPFAM:SSF49764 PROSITE:PS01031 Gene3D:1.10.150.60 SUPFAM:SSF46774
EMBL:AY052359 EMBL:BT002633 EMBL:AK176382 EMBL:AK230281
IPI:IPI00548500 PIR:G84551 RefSeq:NP_179333.2 UniGene:At.12107
ProteinModelPortal:Q940Y3 SMR:Q940Y3 PRIDE:Q940Y3
EnsemblPlants:AT2G17410.1 GeneID:816247 KEGG:ath:AT2G17410
TAIR:At2g17410 eggNOG:NOG313221 HOGENOM:HOG000151156
InParanoid:Q940Y3 OMA:NDANNES PhylomeDB:Q940Y3
ProtClustDB:CLSN2680092 Genevestigator:Q940Y3 Uniprot:Q940Y3
Length = 786
Score = 111 (44.1 bits), Expect = 0.00036, P = 0.00036
Identities = 26/88 (29%), Positives = 42/88 (47%)
Query: 44 QSSDLFWATLEAFHKSFGDKFKVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVV 103
+ F L++F + FK P G+ L+ +L+ VT GG KV + W++V
Sbjct: 495 EDQSAFMKELDSFFRERNMDFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTGSKLWRQVGE 554
Query: 104 VFNFPTTITSASFVLRKYYLSLLYHFEQ 131
F P T T+ S+ R +Y L +E+
Sbjct: 555 SFRPPKTCTTVSWTFRGFYEKALLEYER 582
>MGI|MGI:99780 [details] [associations]
symbol:Kdm5d "lysine (K)-specific demethylase 5D"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034720
"histone H3-K4 demethylation" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:99780 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719 OrthoDB:EOG4894KP
CTD:8284 EMBL:AF127244 EMBL:AK140971 EMBL:BC059077 EMBL:Z29652
IPI:IPI00123375 IPI:IPI00848809 IPI:IPI00848997 IPI:IPI00850747
PIR:I48776 RefSeq:NP_035549.1 UniGene:Mm.262676
ProteinModelPortal:Q62240 SMR:Q62240 STRING:Q62240
PhosphoSite:Q62240 PRIDE:Q62240 Ensembl:ENSMUST00000055032
GeneID:20592 KEGG:mmu:20592 UCSC:uc009uyz.1 UCSC:uc009uzb.1
InParanoid:Q62240 NextBio:298905 Bgee:Q62240 Genevestigator:Q62240
GermOnline:ENSMUSG00000056673 Uniprot:Q62240
Length = 1548
Score = 113 (44.8 bits), Expect = 0.00039, P = 0.00039
Identities = 25/70 (35%), Positives = 36/70 (51%)
Query: 61 GDKFKVPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRK 120
G K+P V K LDL+ L V GG + +DRRW V N+P+ S +LR
Sbjct: 97 GSSLKIPNVERKILDLYSLNKIVMEEGGYEAICKDRRWARVAQRLNYPSGKNIGS-LLRS 155
Query: 121 YYLSLLYHFE 130
+Y ++Y +E
Sbjct: 156 HYERIIYPYE 165
>RGD|708504 [details] [associations]
symbol:Arid1b "AT rich interactive domain 1B (Swi1 like)"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=TAS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0016514 "SWI/SNF complex"
evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
RGD:708504 GO:GO:0003677 GO:GO:0003700 GO:GO:0005622
eggNOG:NOG12793 HOVERGEN:HBG058196 Gene3D:1.10.150.60
InterPro:IPR021906 Pfam:PF12031 SUPFAM:SSF46774
HOGENOM:HOG000232161 OrthoDB:EOG4G7BXG HSSP:Q24573 IPI:IPI00193175
EMBL:AJ440711 UniGene:Rn.214230 UniGene:Rn.228637
ProteinModelPortal:Q8CHN9 SMR:Q8CHN9 STRING:Q8CHN9
PhosphoSite:Q8CHN9 NextBio:624773 Genevestigator:Q8CHN9
Uniprot:Q8CHN9
Length = 1758
Score = 113 (44.8 bits), Expect = 0.00045, P = 0.00045
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 66 VPTVGGKALDLHRLFVEVTSRGGLGKVIRDRRWKEVVVVFNFPTTITSASFVLRKYYLSL 125
+P VG K LDL RL+V V GGL +V +++W+E+ N T+ ++AS +K Y+
Sbjct: 595 LPAVGKKPLDLFRLYVCVKEIGGLAQVHTNKKWRELATNPNVGTSSSAASSP-KKQYIQY 653
Query: 126 LYHFE 130
L+ FE
Sbjct: 654 LFAFE 658
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 187 166 0.00097 107 3 11 22 0.38 32
30 0.46 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 67
No. of states in DFA: 571 (61 KB)
Total size of DFA: 149 KB (2091 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.77u 0.14s 15.91t Elapsed: 00:00:01
Total cpu time: 15.78u 0.14s 15.92t Elapsed: 00:00:01
Start: Thu May 9 19:06:48 2013 End: Thu May 9 19:06:49 2013