Query 029809
Match_columns 187
No_of_seqs 135 out of 273
Neff 3.7
Searched_HMMs 13730
Date Mon Mar 25 05:53:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029809.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/029809hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2otaa1 a.284.1.1 (A:7-68) Hyp 28.7 12 0.00088 24.5 1.7 20 48-67 35-54 (62)
2 d1hdla_ g.68.1.2 (A:) Serine p 26.5 22 0.0016 22.5 2.7 29 72-100 22-50 (55)
3 d1clda_ g.38.1.1 (A:) CD2-Lac9 21.4 16 0.0011 20.3 1.0 15 2-16 2-16 (33)
4 d1zmec1 g.38.1.1 (C:31-66) PUT 19.1 18 0.0013 20.6 1.0 15 1-15 2-16 (36)
5 d3coqa1 g.38.1.1 (A:8-48) Gal4 19.0 17 0.0013 20.8 0.9 15 2-16 3-17 (41)
6 d2dasa1 g.39.1.17 (A:8-56) Zin 17.0 21 0.0015 22.3 1.0 15 1-15 14-37 (49)
7 d1pyia1 g.38.1.1 (A:30-71) PPR 13.1 30 0.0022 19.9 0.9 15 2-16 4-18 (42)
8 d2jrxa1 a.284.1.1 (A:1-75) Unc 12.4 68 0.0049 21.4 2.6 20 48-67 41-61 (75)
9 d1tsja_ d.32.1.7 (A:) Hypothet 11.7 25 0.0018 24.0 0.2 30 19-51 6-35 (129)
10 d1u7ia_ d.32.1.7 (A:) Hypothet 10.3 28 0.0021 23.6 0.1 33 17-52 4-37 (134)
No 1
>d2otaa1 a.284.1.1 (A:7-68) Hypothetical protein CPS2611 {Colwellia psychrerythraea [TaxId: 28229]}
Probab=28.67 E-value=12 Score=24.51 Aligned_cols=20 Identities=30% Similarity=0.561 Sum_probs=16.2
Q ss_pred HHHHHhhCCCCChHHHHHHH
Q 029809 48 LLSFIAAVPQHQRPALFQSL 67 (187)
Q Consensus 48 v~kmL~~lp~~~R~~a~~SL 67 (187)
++++|+++|+.||..++++-
T Consensus 35 vTnii~~V~~~qR~~iAe~F 54 (62)
T d2otaa1 35 VTNIIAQVPESKRVAVVDNF 54 (62)
T ss_dssp HHHHHTTSCGGGHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHH
Confidence 55677889999999888764
No 2
>d1hdla_ g.68.1.2 (A:) Serine proteinase inhibitor lekti {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.53 E-value=22 Score=22.52 Aligned_cols=29 Identities=14% Similarity=0.337 Sum_probs=25.3
Q ss_pred ccCCCCCCCCcHHHHHhHHHHHHHHHHHH
Q 029809 72 CGRTVNPVDGAVGLLSSGNWHVCRAAVET 100 (187)
Q Consensus 72 ~~R~~DPVyGcvG~I~~Lq~qi~qaave~ 100 (187)
+-|..|||-|.=|.+..-.-.+|++-++.
T Consensus 22 Ctr~~~Pv~g~dGkty~NkC~~C~~~~e~ 50 (55)
T d1hdla_ 22 CPQDKKFFQSLDGIMFINKCATCKMILEK 50 (55)
T ss_dssp CCSCGGGGGSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCCCCEeccHhHHHHHHHHH
Confidence 77899999999999999888899877653
No 3
>d1clda_ g.38.1.1 (A:) CD2-Lac9 {Milk yeast (Kluyveromyces lactis) [TaxId: 28985]}
Probab=21.35 E-value=16 Score=20.29 Aligned_cols=15 Identities=40% Similarity=0.959 Sum_probs=13.3
Q ss_pred CccchhhcccCCCCC
Q 029809 2 SCNGCRVLRKGCSET 16 (187)
Q Consensus 2 ~CAACK~lRRrC~~~ 16 (187)
+|..||..+.+|...
T Consensus 2 AC~~Cr~rK~kCd~~ 16 (33)
T d1clda_ 2 ACDACRKKKWKCSKT 16 (33)
T ss_dssp CCHHHHHSCCCCCCC
T ss_pred ChHHHHHhcCccCcc
Confidence 699999999999864
No 4
>d1zmec1 g.38.1.1 (C:31-66) PUT3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=19.09 E-value=18 Score=20.59 Aligned_cols=15 Identities=27% Similarity=0.720 Sum_probs=13.0
Q ss_pred CCccchhhcccCCCC
Q 029809 1 MSCNGCRVLRKGCSE 15 (187)
Q Consensus 1 ~~CAACK~lRRrC~~ 15 (187)
.+|..||..+.+|..
T Consensus 2 ~aC~~Cr~rK~kCd~ 16 (36)
T d1zmec1 2 VACLSCRKRHIKCPG 16 (36)
T ss_dssp CCCHHHHHHTCCCCC
T ss_pred ccHHHHHHhCCcCCC
Confidence 479999999999975
No 5
>d3coqa1 g.38.1.1 (A:8-48) Gal4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=18.97 E-value=17 Score=20.81 Aligned_cols=15 Identities=33% Similarity=0.899 Sum_probs=12.9
Q ss_pred CccchhhcccCCCCC
Q 029809 2 SCNGCRVLRKGCSET 16 (187)
Q Consensus 2 ~CAACK~lRRrC~~~ 16 (187)
+|..||..+.+|...
T Consensus 3 AC~~Cr~rK~KCd~~ 17 (41)
T d3coqa1 3 ACDICRLKKLKCSKE 17 (41)
T ss_dssp CCHHHHHHTCCCCCC
T ss_pred chHHHHHhCcccCCc
Confidence 699999999999753
No 6
>d2dasa1 g.39.1.17 (A:8-56) Zinc finger MYM-type protein 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.03 E-value=21 Score=22.32 Aligned_cols=15 Identities=33% Similarity=0.959 Sum_probs=10.6
Q ss_pred CCccchh---------hcccCCCC
Q 029809 1 MSCNGCR---------VLRKGCSE 15 (187)
Q Consensus 1 ~~CAACK---------~lRRrC~~ 15 (187)
+.|++|| +||++++.
T Consensus 14 v~Ca~Ckk~lqKGQTAyqrkGs~~ 37 (49)
T d2dasa1 14 ITCANCKKPLQKGQTAYQRKGSAH 37 (49)
T ss_dssp CBCTTTCCBCCTTSCCEECTTCCC
T ss_pred eEecccchHHhccchHHhhCCCcc
Confidence 4699998 57777553
No 7
>d1pyia1 g.38.1.1 (A:30-71) PPR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=13.07 E-value=30 Score=19.94 Aligned_cols=15 Identities=27% Similarity=0.919 Sum_probs=13.1
Q ss_pred CccchhhcccCCCCC
Q 029809 2 SCNGCRVLRKGCSET 16 (187)
Q Consensus 2 ~CAACK~lRRrC~~~ 16 (187)
+|..||..+.+|...
T Consensus 4 aC~~Cr~rK~kCd~~ 18 (42)
T d1pyia1 4 ACKRCRLKKIKCDQE 18 (42)
T ss_dssp CCHHHHHHTCCCCCC
T ss_pred HHHHHHHhCcCCCCc
Confidence 799999999999864
No 8
>d2jrxa1 a.284.1.1 (A:1-75) Uncharacterized protein YejL {Escherichia coli [TaxId: 562]}
Probab=12.36 E-value=68 Score=21.39 Aligned_cols=20 Identities=25% Similarity=0.428 Sum_probs=15.4
Q ss_pred HHHHHh-hCCCCChHHHHHHH
Q 029809 48 LLSFIA-AVPQHQRPALFQSL 67 (187)
Q Consensus 48 v~kmL~-~lp~~~R~~a~~SL 67 (187)
++++|+ ++|+.||..++++.
T Consensus 41 vTniln~~V~~~qR~~iAe~F 61 (75)
T d2jrxa1 41 VTNLINTSIAPAQRQAIANSF 61 (75)
T ss_dssp HHHHHHHHSCTTSHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHHHH
Confidence 456664 79999999888764
No 9
>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}
Probab=11.69 E-value=25 Score=24.00 Aligned_cols=30 Identities=10% Similarity=0.375 Sum_probs=19.5
Q ss_pred cccccCCCCCchhhhhhhHHHHhhhchhcHHHH
Q 029809 19 LRSCLQWIDTPEAQGNATLFLAKFFGRSDLLSF 51 (187)
Q Consensus 19 lAPyf~~Fpa~~~q~fa~~~vhKvFG~sNv~km 51 (187)
+-||| ||..+-.++.. |-.++||.+.|.++
T Consensus 6 i~Pyl-~f~g~a~eAi~--FY~~vFg~~~v~~~ 35 (129)
T d1tsja_ 6 ITTFL-MFNNQAEEAVK--LYTSLFEDSEIITM 35 (129)
T ss_dssp EEEEE-ECSSCHHHHHH--HHHHHSSSCEEEEE
T ss_pred EEEEE-EECCCHHHHHH--HHHHHcCCcEEEEE
Confidence 67998 57533334443 47999998776554
No 10
>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=10.30 E-value=28 Score=23.64 Aligned_cols=33 Identities=18% Similarity=0.351 Sum_probs=21.3
Q ss_pred CccccccCCCCCchhh-hhhhHHHHhhhchhcHHHHH
Q 029809 17 CILRSCLQWIDTPEAQ-GNATLFLAKFFGRSDLLSFI 52 (187)
Q Consensus 17 CilAPyf~~Fpa~~~q-~fa~~~vhKvFG~sNv~kmL 52 (187)
..+.||| ||...+.+ +.+ |-.++||..-+.++.
T Consensus 4 ~~l~PyL-~f~g~~a~eAi~--FY~~~Fg~~~v~~~~ 37 (134)
T d1u7ia_ 4 ARVRPFL-MFQGVQAEAAMN--FYLSLFDDAEILQIQ 37 (134)
T ss_dssp CEEEEEE-EEESSCHHHHHH--HHHHHCSSEEEEEEE
T ss_pred CcEEEEE-EECCcCHHHHHH--HHHHhCCCeEEEEEE
Confidence 3478998 57643333 333 479999987666554
Done!