BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>029811
MAQQPVNVPAPTPPPNPAMYSNPVSIIGPQYCLPYPVDLAVVRKFMTLADGSFTVTDIND
NIMFKVKEKHFSLHDKRTLLDPAGNPVVTITEKLFSAHEKHSVFRGASTDAKDLLFTVGA
SSVLQLKTTLNVFWQVIPNKRFVILRSKAAGQNDPVLFMQESPTQLLPRCTKRKPLEATS
LTRIDSP

High Scoring Gene Products

Symbol, full name Information P value
AT5G01750 protein from Arabidopsis thaliana 9.5e-34
AT3G11740 protein from Arabidopsis thaliana 5.7e-27
LURP1
AT2G14560
protein from Arabidopsis thaliana 7.6e-25
AT3G16900 protein from Arabidopsis thaliana 4.2e-15
AT3G56180 protein from Arabidopsis thaliana 5.4e-15
AT3G10986 protein from Arabidopsis thaliana 3.1e-12

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029811
        (187 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2181082 - symbol:AT5G01750 "AT5G01750" species...   367  9.5e-34   1
TAIR|locus:2081481 - symbol:AT3G11740 "AT3G11740" species...   303  5.7e-27   1
TAIR|locus:2055250 - symbol:LURP1 "AT2G14560" species:370...   283  7.6e-25   1
TAIR|locus:2086062 - symbol:AT3G16900 "AT3G16900" species...   191  4.2e-15   1
TAIR|locus:2078506 - symbol:AT3G56180 "AT3G56180" species...   190  5.4e-15   1
TAIR|locus:4515103053 - symbol:AT3G10986 "AT3G10986" spec...   164  3.1e-12   1


>TAIR|locus:2181082 [details] [associations]
            symbol:AT5G01750 "AT5G01750" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=IDA] [GO:0006569 "tryptophan catabolic process"
            evidence=RCA] [GO:0006995 "cellular response to nitrogen
            starvation" evidence=RCA] [GO:0009684 "indoleacetic acid
            biosynthetic process" evidence=RCA] [GO:0030003 "cellular cation
            homeostasis" evidence=RCA] [GO:0070838 "divalent metal ion
            transport" evidence=RCA] EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0009507 EMBL:AL162351 HOGENOM:HOG000242212 InterPro:IPR007612
            InterPro:IPR025659 Pfam:PF04525 SUPFAM:SSF54518 EMBL:AF372877
            EMBL:AY142034 EMBL:AY085369 IPI:IPI00516693 IPI:IPI00533737
            PIR:T48196 RefSeq:NP_568095.1 RefSeq:NP_850751.1 UniGene:At.21392
            PDB:1ZXU PDB:2Q4M PDBsum:1ZXU PDBsum:2Q4M ProteinModelPortal:Q9LZX1
            SMR:Q9LZX1 IntAct:Q9LZX1 STRING:Q9LZX1 PaxDb:Q9LZX1 PRIDE:Q9LZX1
            DNASU:831684 EnsemblPlants:AT5G01750.2 GeneID:831684
            KEGG:ath:AT5G01750 TAIR:At5g01750 eggNOG:NOG242955
            InParanoid:Q9LZX1 OMA:TEMDIFL PhylomeDB:Q9LZX1
            ProtClustDB:CLSN2689401 EvolutionaryTrace:Q9LZX1
            Genevestigator:Q9LZX1 GermOnline:AT5G01750 Uniprot:Q9LZX1
        Length = 217

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 65/108 (60%), Positives = 86/108 (79%)

Query:    26 IIGPQYCLPYPVDLAVVRKFMTLADGSFTVTDINDNIMFKVKEKHFSLHDKRTLLDPAGN 85
             ++ P+YC PYP+D+A+VRK M+L DG+F +TD+N N++FKVKE  F LHDKR LLD +G 
Sbjct:    27 VVDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPVFGLHDKRVLLDGSGT 86

Query:    86 PVVTITEKLFSAHEKHSVFRGASTDAKDLLFTVGASSVLQLKTTLNVF 133
             PVVT+ EK+ S H++  VFRG STD +DLL+TV  SS+LQLKT L+VF
Sbjct:    87 PVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVF 134


>TAIR|locus:2081481 [details] [associations]
            symbol:AT3G11740 "AT3G11740" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AC016795 EMBL:BX825412
            IPI:IPI00545966 RefSeq:NP_187780.2 UniGene:At.50173
            ProteinModelPortal:Q9SF24 SMR:Q9SF24 PRIDE:Q9SF24
            EnsemblPlants:AT3G11740.1 GeneID:820346 KEGG:ath:AT3G11740
            TAIR:At3g11740 HOGENOM:HOG000242212 OMA:DINREDS
            Genevestigator:Q9SF24 InterPro:IPR007612 InterPro:IPR025659
            Pfam:PF04525 SUPFAM:SSF54518 Uniprot:Q9SF24
        Length = 194

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 55/111 (49%), Positives = 80/111 (72%)

Query:    24 VSIIGPQYCLPYPVDLAVVRKFMTLADGSFTVTDINDNIMFKVKEKHFSLHDKRTLLDPA 83
             ++I+ P +C PYP++L +VRK MTL DG+F VTD+N N++FKVKE  FS+ DKR LLD  
Sbjct:     1 MAIVSPNFCAPYPIELGIVRKVMTLTDGNFAVTDVNGNLLFKVKEPLFSISDKRILLDAY 60

Query:    84 GNPVVTITEKLFSAHEKHSVFRGASTDAKDLLFTVGASSVLQL-KTTLNVF 133
               P++T+ E   S H++  V+RG STD  DLL+T+  SS++Q+ K  L++F
Sbjct:    61 DTPILTLRENKVSLHDRWLVYRGKSTDQSDLLYTLKRSSMIQIMKPKLDIF 111


>TAIR|locus:2055250 [details] [associations]
            symbol:LURP1 "AT2G14560" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009751
            "response to salicylic acid stimulus" evidence=IEP] [GO:0050832
            "defense response to fungus" evidence=RCA;IMP] [GO:0000165 "MAPK
            cascade" evidence=RCA] [GO:0006612 "protein targeting to membrane"
            evidence=RCA] [GO:0009595 "detection of biotic stimulus"
            evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
            evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
            acid mediated signaling pathway" evidence=RCA] [GO:0009867
            "jasmonic acid mediated signaling pathway" evidence=RCA]
            [GO:0010200 "response to chitin" evidence=RCA] [GO:0010310
            "regulation of hydrogen peroxide metabolic process" evidence=RCA]
            [GO:0010363 "regulation of plant-type hypersensitive response"
            evidence=RCA] [GO:0031348 "negative regulation of defense response"
            evidence=RCA] [GO:0042742 "defense response to bacterium"
            evidence=RCA] [GO:0043069 "negative regulation of programmed cell
            death" evidence=RCA] [GO:0043900 "regulation of multi-organism
            process" evidence=RCA] [GO:0045088 "regulation of innate immune
            response" evidence=RCA] EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0050832 GO:GO:0009751 EMBL:AC006067 HOGENOM:HOG000242212
            InterPro:IPR007612 InterPro:IPR025659 Pfam:PF04525 SUPFAM:SSF54518
            EMBL:AY070390 EMBL:BT015680 EMBL:AK317043 IPI:IPI00542354
            IPI:IPI00544053 PIR:F84518 RefSeq:NP_179062.1 RefSeq:NP_973456.1
            UniGene:At.28628 ProteinModelPortal:Q9ZQR8 SMR:Q9ZQR8 STRING:Q9ZQR8
            PRIDE:Q9ZQR8 EnsemblPlants:AT2G14560.1 GeneID:815943
            KEGG:ath:AT2G14560 TAIR:At2g14560 eggNOG:euNOG08032
            InParanoid:Q9ZQR8 PhylomeDB:Q9ZQR8 ProtClustDB:CLSN2679323
            Genevestigator:Q9ZQR8 Uniprot:Q9ZQR8
        Length = 207

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 61/152 (40%), Positives = 91/152 (59%)

Query:    23 PVSIIGPQYCLPYPVDLAVVRKFMTLADGSFTVTDINDNIMFKVKEKHFSLHDKRTLLDP 82
             P  I+G +YC P PV LA+VRK M + DG+F +T  +  ++FKVK+  FSLH KR LLD 
Sbjct:     4 PCVIVGSKYCSPNPVGLAIVRKVMKITDGNFVITSADGKLLFKVKDPLFSLHGKRILLDC 63

Query:    83 AGNPVVTITEKLFSAHEKHSVFRGASTDAKDLLFTVGASSVLQLKTTLNVFWQVIPNKRF 142
             +G  V+T+  K+ + H++  VFRG ST+   LL+TV  SS++QL   L VF      ++ 
Sbjct:    64 SGAKVLTLRGKMMTMHDRWQVFRGGSTEEGALLYTVKRSSMIQLAPKLEVFLANNVEEKI 123

Query:   143 VILRSKAAGQNDP-VLFMQESPTQLLPRCTKR 173
                + K A  +D  V++  +S T +   C K+
Sbjct:   124 CDFKVKGAWLDDSCVVYAGDSDTIIAHMCGKQ 155


>TAIR|locus:2086062 [details] [associations]
            symbol:AT3G16900 "AT3G16900" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB026636
            HOGENOM:HOG000242212 InterPro:IPR007612 InterPro:IPR025659
            Pfam:PF04525 SUPFAM:SSF54518 IPI:IPI00524859 RefSeq:NP_188315.1
            UniGene:At.53343 ProteinModelPortal:Q9LSQ1 SMR:Q9LSQ1 DNASU:820945
            EnsemblPlants:AT3G16900.1 GeneID:820945 KEGG:ath:AT3G16900
            TAIR:At3g16900 eggNOG:NOG307293 InParanoid:Q9LSQ1 OMA:KRACTIY
            PhylomeDB:Q9LSQ1 ProtClustDB:CLSN2913458 Genevestigator:Q9LSQ1
            Uniprot:Q9LSQ1
        Length = 185

 Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
 Identities = 44/108 (40%), Positives = 64/108 (59%)

Query:    26 IIGPQYCLPYPVDLAVVRKFMTLADGSFTVTDINDNIMFKVKEKHFSLHDKRTLLDPAGN 85
             ++G ++  P P+DL +        D   TV D   N +FKVK   F LH+KR L+DP  +
Sbjct:    15 LVGSEFVRPQPLDLTIT------GD---TVKDATGNKVFKVKTPLFGLHNKRILVDPNDS 65

Query:    86 PVVTITEKLFSAHEKHSVFRGASTDAKDLLFTVGASSVLQLKTTLNVF 133
             P+VT+  K+ S H++  V+RG+  D  D +FTV  SS +QLKT + VF
Sbjct:    66 PIVTMKMKVTSKHDRWQVYRGSDLD--DKIFTVKRSSTVQLKTRVEVF 111


>TAIR|locus:2078506 [details] [associations]
            symbol:AT3G56180 "AT3G56180" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL163763
            HOGENOM:HOG000242212 InterPro:IPR007612 InterPro:IPR025659
            Pfam:PF04525 SUPFAM:SSF54518 EMBL:AK229670 IPI:IPI00527930
            PIR:T47735 RefSeq:NP_191177.2 UniGene:At.34959
            ProteinModelPortal:Q9LYM3 SMR:Q9LYM3 EnsemblPlants:AT3G56180.1
            GeneID:824784 KEGG:ath:AT3G56180 TAIR:At3g56180 eggNOG:NOG329211
            InParanoid:Q9LYM3 OMA:FLPENNN PhylomeDB:Q9LYM3
            Genevestigator:Q9LYM3 Uniprot:Q9LYM3
        Length = 204

 Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
 Identities = 37/110 (33%), Positives = 65/110 (59%)

Query:    24 VSIIGPQYCLPYPVDLAVVRKFMTLADGSFTVTDINDNIMFKVKEKHFSLHDKRTLLDPA 83
             +S++  Q+C PYP+DL V RK    +   + V D + N++ ++  + +  + KR + DPA
Sbjct:    16 ISVVSDQFCNPYPMDLLVKRKVQNFSKDYYEVFDPSGNLLLQIDGQAWGFNRKRVMRDPA 75

Query:    84 GNPVVTITEKLFSAHEKHSVFRGASTDAKDLLFTVGASSVLQLKTTLNVF 133
             G  ++++ +K  +   K  V  G S + +DLLFTV  S  + LKT+++VF
Sbjct:    76 GFTILSMRQKGLALKNKWEVHGGESKEREDLLFTVQQSQAVSLKTSVDVF 125


>TAIR|locus:4515103053 [details] [associations]
            symbol:AT3G10986 "AT3G10986" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC009991
            HOGENOM:HOG000242212 InterPro:IPR007612 InterPro:IPR025659
            Pfam:PF04525 SUPFAM:SSF54518 IPI:IPI00891489 RefSeq:NP_001118614.1
            UniGene:At.73679 ProteinModelPortal:B3H5L1 SMR:B3H5L1
            EnsemblPlants:AT3G10986.1 GeneID:6240409 KEGG:ath:AT3G10986
            TAIR:At3g10986 eggNOG:NOG291370 OMA:GIWNIRR PhylomeDB:B3H5L1
            ProtClustDB:CLSN2918345 Genevestigator:B3H5L1 Uniprot:B3H5L1
        Length = 197

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 36/110 (32%), Positives = 66/110 (60%)

Query:    24 VSIIGPQYCLPYPVDLAVVRKFMTLADGSFTVTDINDNIMFKVKEKHFSLHDKRTLLDPA 83
             VS++G  +C PY  +L V R+  +L    + V D+++N++F V    +++  KR L D A
Sbjct:     2 VSVVGEMFCNPYTTELVVRRRRESLKRERYDVFDLSNNLIFTVDGGIWNIRRKRVLRDAA 61

Query:    84 GNPVVTI-TEKLFSAHEKHSVFRGASTDAKDLLFTVGASSVLQLKTTLNV 132
             G P++++ T+ L        V++G ST++ +LLF+    ++L  KT+L+V
Sbjct:    62 GIPLLSMRTKGLVPMRYNWEVYKGDSTESDNLLFSAREPNLLSFKTSLDV 111


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.134   0.391    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      187       173   0.00097  108 3  11 22  0.38    32
                                                     31  0.48    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  584 (62 KB)
  Total size of DFA:  141 KB (2087 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.39u 0.11s 15.50t   Elapsed:  00:00:00
  Total cpu time:  15.39u 0.11s 15.50t   Elapsed:  00:00:00
  Start:  Thu May  9 19:18:05 2013   End:  Thu May  9 19:18:05 2013

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