BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029811
(187 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LZX1|LOR15_ARATH Protein LURP-one-related 15 OS=Arabidopsis thaliana GN=At5g01750
PE=1 SV=1
Length = 217
Score = 150 bits (379), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 102/154 (66%), Gaps = 8/154 (5%)
Query: 10 APTPPPNPAMYSNPVSIIGPQYCLPYPVDLAVVRKFMTLADGSFTVTDINDNIMFKVKEK 69
APTP ++ P+YC PYP+D+A+VRK M+L DG+F +TD+N N++FKVKE
Sbjct: 18 APTPQAGGV-------VVDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEP 70
Query: 70 HFSLHDKRTLLDPAGNPVVTITEKLFSAHEKHSVFRGASTDAKDLLFTVGASSVLQLKTT 129
F LHDKR LLD +G PVVT+ EK+ S H++ VFRG STD +DLL+TV SS+LQLKT
Sbjct: 71 VFGLHDKRVLLDGSGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTK 130
Query: 130 LNVFWQVIPNKRFVILRSKAAG-QNDPVLFMQES 162
L+VF +++ R K + + V++ ES
Sbjct: 131 LDVFLGHNKDEKRCDFRVKGSWLERSCVVYAGES 164
>sp|Q9SF24|LOR10_ARATH Protein LURP-one-related 10 OS=Arabidopsis thaliana GN=At3g11740
PE=2 SV=2
Length = 194
Score = 119 bits (299), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 80/111 (72%), Gaps = 1/111 (0%)
Query: 24 VSIIGPQYCLPYPVDLAVVRKFMTLADGSFTVTDINDNIMFKVKEKHFSLHDKRTLLDPA 83
++I+ P +C PYP++L +VRK MTL DG+F VTD+N N++FKVKE FS+ DKR LLD
Sbjct: 1 MAIVSPNFCAPYPIELGIVRKVMTLTDGNFAVTDVNGNLLFKVKEPLFSISDKRILLDAY 60
Query: 84 GNPVVTITEKLFSAHEKHSVFRGASTDAKDLLFTVGASSVLQ-LKTTLNVF 133
P++T+ E S H++ V+RG STD DLL+T+ SS++Q +K L++F
Sbjct: 61 DTPILTLRENKVSLHDRWLVYRGKSTDQSDLLYTLKRSSMIQIMKPKLDIF 111
>sp|Q9LQ36|LOR1_ARATH Protein LURP-one-related 1 OS=Arabidopsis thaliana GN=At1g33840
PE=2 SV=2
Length = 224
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 85/133 (63%), Gaps = 2/133 (1%)
Query: 3 QQPVNV--PAPTPPPNPAMYSNPVSIIGPQYCLPYPVDLAVVRKFMTLADGSFTVTDIND 60
QQP P T P P I+ P+YC +PVDLA+VRK + + DG+F +T+
Sbjct: 2 QQPYEYRYPQGTGPSAPPPPPKAGVIVDPKYCSLHPVDLAIVRKVLKITDGNFVITNAEG 61
Query: 61 NIMFKVKEKHFSLHDKRTLLDPAGNPVVTITEKLFSAHEKHSVFRGASTDAKDLLFTVGA 120
N++FKVK+ FSLH+KR L+D G V+T+ K+ + H++ VFRG ST+ DLL+TV
Sbjct: 62 NLLFKVKDPFFSLHEKRILMDGFGTKVLTLKGKIMTMHDRWLVFRGGSTEEVDLLYTVKR 121
Query: 121 SSVLQLKTTLNVF 133
S+++Q+ T L+VF
Sbjct: 122 SNMVQITTKLDVF 134
>sp|Q9ZQR8|LURP1_ARATH Protein LURP1 OS=Arabidopsis thaliana GN=LURP1 PE=2 SV=1
Length = 207
Score = 117 bits (293), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 91/153 (59%), Gaps = 1/153 (0%)
Query: 22 NPVSIIGPQYCLPYPVDLAVVRKFMTLADGSFTVTDINDNIMFKVKEKHFSLHDKRTLLD 81
P I+G +YC P PV LA+VRK M + DG+F +T + ++FKVK+ FSLH KR LLD
Sbjct: 3 QPCVIVGSKYCSPNPVGLAIVRKVMKITDGNFVITSADGKLLFKVKDPLFSLHGKRILLD 62
Query: 82 PAGNPVVTITEKLFSAHEKHSVFRGASTDAKDLLFTVGASSVLQLKTTLNVFWQVIPNKR 141
+G V+T+ K+ + H++ VFRG ST+ LL+TV SS++QL L VF ++
Sbjct: 63 CSGAKVLTLRGKMMTMHDRWQVFRGGSTEEGALLYTVKRSSMIQLAPKLEVFLANNVEEK 122
Query: 142 FVILRSKAAGQNDP-VLFMQESPTQLLPRCTKR 173
+ K A +D V++ +S T + C K+
Sbjct: 123 ICDFKVKGAWLDDSCVVYAGDSDTIIAHMCGKQ 155
>sp|Q9LYM3|LOR14_ARATH Protein LURP-one-related 14 OS=Arabidopsis thaliana GN=At3g56180
PE=2 SV=2
Length = 204
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 65/110 (59%)
Query: 24 VSIIGPQYCLPYPVDLAVVRKFMTLADGSFTVTDINDNIMFKVKEKHFSLHDKRTLLDPA 83
+S++ Q+C PYP+DL V RK + + V D + N++ ++ + + + KR + DPA
Sbjct: 16 ISVVSDQFCNPYPMDLLVKRKVQNFSKDYYEVFDPSGNLLLQIDGQAWGFNRKRVMRDPA 75
Query: 84 GNPVVTITEKLFSAHEKHSVFRGASTDAKDLLFTVGASSVLQLKTTLNVF 133
G ++++ +K + K V G S + +DLLFTV S + LKT+++VF
Sbjct: 76 GFTILSMRQKGLALKNKWEVHGGESKEREDLLFTVQQSQAVSLKTSVDVF 125
>sp|Q9LSQ1|LOR13_ARATH Protein LURP-one-related 13 OS=Arabidopsis thaliana GN=At3g16900
PE=3 SV=1
Length = 185
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 64/110 (58%), Gaps = 11/110 (10%)
Query: 26 IIGPQYCLPYPVDLAVVRKFMTLADGSFTVTDINDNIMFKVKEKHFSLHDKRTLLDPAGN 85
++G ++ P P+DL + TV D N +FKVK F LH+KR L+DP +
Sbjct: 15 LVGSEFVRPQPLDLTITGD---------TVKDATGNKVFKVKTPLFGLHNKRILVDPNDS 65
Query: 86 PVVTITEKLFSAHEKHSVFRGASTDAKDLLFTVGASSVLQLKTTLNVFWQ 135
P+VT+ K+ S H++ V+RG+ D D +FTV SS +QLKT + VF +
Sbjct: 66 PIVTMKMKVTSKHDRWQVYRGSDLD--DKIFTVKRSSTVQLKTRVEVFLK 113
>sp|B3H5L1|LOR9_ARATH Protein LURP-one-related 9 OS=Arabidopsis thaliana GN=At3g10986
PE=3 SV=1
Length = 197
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Query: 24 VSIIGPQYCLPYPVDLAVVRKFMTLADGSFTVTDINDNIMFKVKEKHFSLHDKRTLLDPA 83
VS++G +C PY +L V R+ +L + V D+++N++F V +++ KR L D A
Sbjct: 2 VSVVGEMFCNPYTTELVVRRRRESLKRERYDVFDLSNNLIFTVDGGIWNIRRKRVLRDAA 61
Query: 84 GNPVVTI-TEKLFSAHEKHSVFRGASTDAKDLLFTVGASSVLQLKTTLNV 132
G P++++ T+ L V++G ST++ +LLF+ ++L KT+L+V
Sbjct: 62 GIPLLSMRTKGLVPMRYNWEVYKGDSTESDNLLFSAREPNLLSFKTSLDV 111
>sp|P94352|YXJI_BACSU Uncharacterized protein YxjI OS=Bacillus subtilis (strain 168)
GN=yxjI PE=3 SV=1
Length = 162
Score = 37.7 bits (86), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 37 VDLAVVRKFMTLADGSFTVTDINDNIMFKVKEKHFSLHDKRTLLDPAGNPVVTITEKLFS 96
++L + +K + D +F + D ++ FKV+ + FSL D + D +G +V+I +KL S
Sbjct: 2 IELFMKQKMFSFKD-AFHIYDRDEQETFKVEGRFFSLGDSLQMTDSSGKTLVSIEQKLMS 60
Query: 97 AHEKHSVFRGAST 109
++ + G T
Sbjct: 61 LLPRYEISIGGKT 73
>sp|Q9ZVI6|LOR8_ARATH Protein LURP-one-related 8 OS=Arabidopsis thaliana GN=At2g38640
PE=2 SV=1
Length = 196
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 36 PVDLAVVRKFMTLADGSFTVTDINDNIMFKVKEKHFSLHDKRTLLDPAGNPVVTITEKLF 95
V L V +K + FTV + N ++F+V D L+D +G P+++I K
Sbjct: 22 AVVLTVWKKSLLFNCDGFTVYNANGELVFRVDNYMNCPRDNIVLMDASGFPLLSIRRKKL 81
Query: 96 SAHEKHSVFRGASTDAKDLLFT 117
S + V+ G + +D +FT
Sbjct: 82 SLGDCWMVYDGET--ERDPIFT 101
>sp|Q6CM99|HIR2_KLULA Protein HIR2 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359
/ DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=HIR2
PE=3 SV=1
Length = 847
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 48 LADGSFTVTDINDNIMFKVKEKHFSLHDKRTLLDPA 83
L DG T +++DN ++ + K+ S+ D +TLL+ A
Sbjct: 10 LHDGQLTQCEVDDNKLYIIGGKYLSIWDSQTLLNAA 45
>sp|Q9LVZ8|LOR12_ARATH Protein LURP-one-related 12 OS=Arabidopsis thaliana GN=At3g15810
PE=2 SV=1
Length = 220
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 39 LAVVRKFMTLADGSFTVTDINDNIMFKVKEK--HFSLHDKRTLLDPAGNPVVTITEKLFS 96
L V + + F D +I+F+V +D+ L+D G ++T+ K +
Sbjct: 33 LTVCKTSLFYTGDGFAAYDCRGDIIFRVDSYGPDTRDNDEIVLMDATGKCLLTVKRKRPT 92
Query: 97 AHEKHSVFRGASTDAKDLLFTVGASSVLQLKTTLNV 132
H++ F G ++ + +F+V SS++ + T+ V
Sbjct: 93 LHQRWEGFLGERSEGQKPIFSVRRSSIIG-RCTMEV 127
>sp|Q9ZUF7|LOR6_ARATH Protein LURP-one-related 6 OS=Arabidopsis thaliana GN=At2g05910
PE=2 SV=1
Length = 191
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 25 SIIGPQYCLPYPVDLAVVRKFMTLADGSFTVTDINDNIMFKVKEKH-FSLHDKRTLLDPA 83
+++ YC + V R+ + G F VTD + I+FK+ + L D
Sbjct: 3 AVVSKLYCSSMEEVMVVRRRPHVVNGGGFVVTDYKEKIVFKIDGCGVLGTKGELVLRDSD 62
Query: 84 GNPVVTITEK--LFSAHEKHSVFRGASTD 110
GN ++ I +K + A H+ ++G S D
Sbjct: 63 GNDLLLIHKKGGVVQALSIHNKWKGYSYD 91
>sp|Q9SCQ2|UPL7_ARATH E3 ubiquitin-protein ligase UPL7 OS=Arabidopsis thaliana GN=UPL7 PE=2
SV=1
Length = 1142
Score = 30.0 bits (66), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 14/97 (14%)
Query: 93 KLFSAHEKHSVFRGASTDA------KDLLFTVGASSVLQLKTTLNVFWQVI----PNKRF 142
KLF+AHE + + G + D ++ +T G S T+ +FW+V+ P++R
Sbjct: 1001 KLFNAHEFNQLLSGGNHDIDVDDLRRNTKYTGGYSDS---SRTIKIFWEVMKGFEPSERC 1057
Query: 143 VILRSKAAGQNDPVL-FMQESPTQLLPRCTKRKPLEA 178
++L+ + P+L F PT ++ + + L A
Sbjct: 1058 LLLKFVTSCSRAPLLGFKYLQPTFIIHKVSCDTSLWA 1094
>sp|P77445|EUTE_ECOLI Ethanolamine utilization protein EutE OS=Escherichia coli (strain
K12) GN=eutE PE=4 SV=1
Length = 467
Score = 30.0 bits (66), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 35/184 (19%)
Query: 8 VPAPTPPPNPA--MYSNPVSIIGPQYCL---PYPVDLAVVRKFMTL-------ADG--SF 53
V + TP NPA + +N +S+I + P+P V ++ +TL A G +
Sbjct: 129 VASVTPSTNPAATVINNAISLIAAGNSVIFAPHPAAKKVSQRAITLLNQAIVAAGGPENL 188
Query: 54 TVTDINDNI-----MFK--------------VKEKHFSLHDKRTLLDPAGNPVVTITEKL 94
VT N +I +FK V E +KR + AGNP V + E
Sbjct: 189 LVTVANPDIETAQRLFKFPGIGLLVVTGGEAVVEAARKHTNKRLIAAGAGNPPVVVDETA 248
Query: 95 FSAHEKHSVFRGASTDAKDLLFTVGASSVLQLKTTLNVFWQVIPNKRFVILRSKAAGQND 154
A S+ +GAS D + + ++ + + + +++ + V L ++ A Q
Sbjct: 249 DLARAAQSIVKGASFD--NNIICADEKVLIVVDSVADELMRLMEGQHAVKLTAEQAQQLQ 306
Query: 155 PVLF 158
PVL
Sbjct: 307 PVLL 310
>sp|A0RMG7|LEUC_CAMFF 3-isopropylmalate dehydratase large subunit OS=Campylobacter fetus
subsp. fetus (strain 82-40) GN=leuC PE=3 SV=1
Length = 421
Score = 30.0 bits (66), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 89 TITEKLFSAHEKHSVFRGASTDAK 112
TITEK+FS H +H+V+ G + K
Sbjct: 4 TITEKIFSEHVQHAVYAGQIVETK 27
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,348,987
Number of Sequences: 539616
Number of extensions: 2836599
Number of successful extensions: 12581
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 12521
Number of HSP's gapped (non-prelim): 66
length of query: 187
length of database: 191,569,459
effective HSP length: 111
effective length of query: 76
effective length of database: 131,672,083
effective search space: 10007078308
effective search space used: 10007078308
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)