BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029814
(187 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26
OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1
Length = 153
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 121 FQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESIS--K 178
Q V ++V + C+GC K+++ + M+GV+S +++ + +VTV+G++ P V+ +S
Sbjct: 25 LQTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRT 84
Query: 179 VKRAEFWP 186
K+ E WP
Sbjct: 85 GKKVELWP 92
>sp|Q59385|COPA_ECOLI Copper-exporting P-type ATPase A OS=Escherichia coli (strain K12)
GN=copA PE=1 SV=4
Length = 834
Score = 39.7 bits (91), Expect = 0.011, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 83 SIKRQAQDDIHSHHDPKPKP-NPKSMPLIKL-------PLASSDQVFQVVVMRVSLHCQG 134
+IK+ D SH PK KP S+P L P A++D ++ + C
Sbjct: 55 TIKQAGYDASVSH--PKAKPLAESSIPSEALTAVSEALPAATADDDDSQQLLLSGMSCAS 112
Query: 135 CAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISK 178
C +++ L + GVT ++L + VMG SP +++++ K
Sbjct: 113 CVTRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEK 156
>sp|Q6CIG2|CCS1_KLULA Superoxide dismutase 1 copper chaperone OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=CCS1 PE=3 SV=1
Length = 245
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 30/54 (55%)
Query: 128 VSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR 181
V +HC+ C ++K L + G+ + + D++ + V GH +P+ ++ ++ R
Sbjct: 15 VEMHCESCTNDIQKCLKDVNGIKNVTFDIKDNLMNVEGHAAPSAIINALKNCGR 68
>sp|Q8XD24|COPA_ECO57 Copper-exporting P-type ATPase A OS=Escherichia coli O157:H7
GN=copA PE=3 SV=3
Length = 834
Score = 39.7 bits (91), Expect = 0.012, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 83 SIKRQAQDDIHSHHDPKPKP-NPKSMPLIKL-------PLASSDQVFQVVVMRVSLHCQG 134
+IK+ D SH PK KP S+P L P A++D ++ + C
Sbjct: 55 TIKQAGYDASVSH--PKAKPLAESSIPSEALTAVSEALPAATADDDDSQQLLLSGMSCAS 112
Query: 135 CAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISK 178
C +++ L + GVT ++L + VMG SP +++++ K
Sbjct: 113 CVTRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEK 156
>sp|Q6BK66|CCS1_DEBHA Superoxide dismutase 1 copper chaperone OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=CCS1 PE=3 SV=2
Length = 250
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 31/58 (53%)
Query: 124 VVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR 181
+V V + CQ C + L + G++ + IDL++ VT G + P+ ++++I +
Sbjct: 7 IVFAVPMECQSCVDSVSSSLKSLNGISKYDIDLKSNLVTTEGSVPPSEIVKAIQSTGK 64
>sp|Q8ZR95|COPA_SALTY Copper-exporting P-type ATPase A OS=Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720) GN=copA PE=1 SV=3
Length = 833
Score = 38.1 bits (87), Expect = 0.031, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 83 SIKRQAQDDIHSHHDPKPKP-NPKSMPLI-------KLPLASSDQVFQVVVMRVSLHCQG 134
+IK+ SH PK KP S+P +LP+A++D+ Q +++ + C
Sbjct: 55 TIKQAGYGATLSH--PKAKPLTESSIPSEALAAVPHELPVATADEESQQLLLS-GMSCAS 111
Query: 135 CAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISK 178
C +++ L + GVT ++L + VMG S +++++ K
Sbjct: 112 CVTRVQHALQSVPGVTQARVNLAERTALVMGSASAADLVQAVEK 155
>sp|Q8Z8S4|COPA_SALTI Copper-exporting P-type ATPase A OS=Salmonella typhi GN=copA PE=3
SV=3
Length = 833
Score = 38.1 bits (87), Expect = 0.031, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 83 SIKRQAQDDIHSHHDPKPKP-NPKSMPLI-------KLPLASSDQVFQVVVMRVSLHCQG 134
+IK+ SH PK KP S+P +LP+A++D+ Q +++ + C
Sbjct: 55 TIKQAGYGATLSH--PKAKPLTESSIPSEALAAVPHELPVATADEESQQLLLS-GMSCAS 111
Query: 135 CAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISK 178
C +++ L + GVT ++L + VMG S +++++ K
Sbjct: 112 CVTRVQHALQSVPGVTQARVNLAERTALVMGSASAADLVQAVEK 155
>sp|Q75DD6|CCS1_ASHGO Superoxide dismutase 1 copper chaperone OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=CCS1 PE=3 SV=1
Length = 238
Score = 37.7 bits (86), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 128 VSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR 181
V +HC C G++ + L + GV + DLE + V V G P+ ++++++ R
Sbjct: 14 VPMHCGDCTGEISRALRAVPGVQEVTPDLERQLVAVRGIAPPSSIVQALAATGR 67
>sp|Q966B0|PAWC1_CAEEL PAW domain-containing protein Y50D4B.3 OS=Caenorhabditis elegans
GN=Y50D4B.3 PE=1 SV=2
Length = 400
Score = 37.0 bits (84), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 83 SIKRQAQDDIHSHHDPKPKPNPKSMPLIKLPLASSDQVFQVVVMRVSLHCQ--GCAGKLK 140
+I+R A DD + + K KP+ + M K L ++D+V + +V+R+ Q GK +
Sbjct: 83 NIERHADDDTYDVYLQKIKPDEEGMIYWKFDLKATDKVVKTLVIRMIGINQTLNGGGKAE 142
Query: 141 KHLSKMEGVTSFSID 155
L E T +D
Sbjct: 143 ACLETFENCTEIPVD 157
>sp|O32220|COPA_BACSU Copper-exporting P-type ATPase A OS=Bacillus subtilis (strain 168)
GN=copA PE=1 SV=2
Length = 802
Score = 36.6 bits (83), Expect = 0.091, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 10/71 (14%)
Query: 124 VVMRVS-LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTG---VLESISKV 179
+ M+VS + C CA +++K L +M GVT +++L T+ V+ + TG + E I K+
Sbjct: 7 IAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETSNVIYDPAETGTAAIQEKIEKL 66
Query: 180 ------KRAEF 184
++AEF
Sbjct: 67 GYHVVTEKAEF 77
Score = 32.0 bits (71), Expect = 2.6, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 22/34 (64%)
Query: 130 LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTV 163
+ C CA +++K L+K+EGV + ++ + VTV
Sbjct: 82 MTCAACANRIEKRLNKIEGVANAPVNFALETVTV 115
>sp|Q9XT28|ATOX1_SHEEP Copper transport protein ATOX1 OS=Ovis aries GN=ATOX1 PE=3 SV=1
Length = 68
Score = 36.6 bits (83), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 128 VSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKRA 182
V + C+GC+ + + L+K+ GV F IDL K+V + S +LE++ K +A
Sbjct: 8 VDMTCEGCSNAVTRVLNKLGGV-QFDIDLPNKKVCINSEHSVDTLLETLGKTGKA 61
>sp|Q3T0E0|ATOX1_BOVIN Copper transport protein ATOX1 OS=Bos taurus GN=ATOX1 PE=3 SV=1
Length = 68
Score = 36.6 bits (83), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 128 VSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKRA 182
V + C+GC+ + + L+K+ GV F IDL K+V + S +LE++ K +A
Sbjct: 8 VDMTCEGCSNAVTRVLNKLGGV-QFDIDLPNKKVCINSEHSVDTLLETLGKTGKA 61
>sp|P58414|CADA_LISMO Probable cadmium-transporting ATPase OS=Listeria monocytogenes
serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=cadA PE=3
SV=1
Length = 707
Score = 36.6 bits (83), Expect = 0.10, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 7/53 (13%)
Query: 130 LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKRA 182
+ C CAGK +K++ +EGVT ++ +++V G SIS++++A
Sbjct: 15 MSCTNCAGKFEKNVKNLEGVTDAKVNFGAGKISVYGET-------SISQIEKA 60
>sp|Q9TT99|ATOX1_CANFA Copper transport protein ATOX1 OS=Canis familiaris GN=ATOX1 PE=3
SV=1
Length = 68
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 128 VSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKRA 182
V + C+GC+ + + L+K+ GV F IDL K+V + S +LE++ K +A
Sbjct: 8 VDMTCEGCSNAVSRVLNKLGGV-EFDIDLPNKKVCINSEHSVDILLETLEKTGKA 61
>sp|O08997|ATOX1_MOUSE Copper transport protein ATOX1 OS=Mus musculus GN=Atox1 PE=2 SV=1
Length = 68
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 128 VSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKRA 182
V + C+GCA + + L+K+ GV F+IDL K+V + S +L +++K +A
Sbjct: 8 VDMTCEGCAEAVSRVLNKLGGV-EFNIDLPNKKVCIDSEHSSDTLLATLNKTGKA 61
>sp|Q54PZ2|ATOX1_DICDI Copper transport protein ATOX1 homolog OS=Dictyostelium discoideum
GN=atox1 PE=3 SV=2
Length = 67
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 128 VSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVT 162
V + C GC+ + LSK++GV++ IDLE K+V+
Sbjct: 7 VDMTCGGCSKAVNAILSKIDGVSNIQIDLENKKVS 41
>sp|P40202|CCS1_YEAST Superoxide dismutase 1 copper chaperone OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CCS1 PE=1 SV=1
Length = 249
Score = 34.7 bits (78), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 11/47 (23%), Positives = 28/47 (59%)
Query: 130 LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESI 176
+HC+ C +K L + G+ S + D+E + ++V ++P+ ++ ++
Sbjct: 15 MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTL 61
>sp|Q60048|CADA_LISMN Probable cadmium-transporting ATPase OS=Listeria monocytogenes
GN=cadA PE=1 SV=1
Length = 711
Score = 34.7 bits (78), Expect = 0.42, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 125 VMRVS-LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHIS 168
V RV L C CA K ++++ ++EGVT ++ ++TV G S
Sbjct: 6 VYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS 50
>sp|Q9WUC4|ATOX1_RAT Copper transport protein ATOX1 OS=Rattus norvegicus GN=Atox1 PE=1
SV=1
Length = 68
Score = 33.9 bits (76), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 128 VSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKRA 182
V + C GCA + + L+K+ GV F+IDL K+V + S +L +++K +A
Sbjct: 8 VDMTCGGCAEAVSRVLNKLGGV-EFNIDLPNKKVCIESEHSSDILLATLNKTGKA 61
>sp|Q969V6|MKL1_HUMAN MKL/myocardin-like protein 1 OS=Homo sapiens GN=MKL1 PE=1 SV=1
Length = 931
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 46 IDDDHTRLIKYSKLIDNSHHPPSSNYKRSLHFVPSTSS 83
IDD H++++ + ++D HPPS LHFVP SS
Sbjct: 840 IDDLHSQMLSSTAILD---HPPSPMDTSELHFVPEPSS 874
>sp|O32620|COPP_HELFC COP-associated protein OS=Helicobacter felis (strain ATCC 49179 /
NCTC 12436 / CS1) GN=copP PE=4 SV=1
Length = 66
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 129 SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTV 163
+ CQ C K++K + ++EGV+ +DL+ + V V
Sbjct: 9 GMTCQHCVDKIEKFVGELEGVSYIGVDLDKQSVQV 43
>sp|Q8K4J6|MKL1_MOUSE MKL/myocardin-like protein 1 OS=Mus musculus GN=Mkl1 PE=1 SV=2
Length = 964
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 46 IDDDHTRLIKYSKLIDNSHHPPSSNYKRSLHFVPSTSS 83
IDD H++++ S ++D HPPS LHF P SS
Sbjct: 873 IDDLHSQMLSSSAILD---HPPSPMDTSELHFAPEPSS 907
>sp|P38636|ATX1_YEAST Metal homeostasis factor ATX1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ATX1 PE=1 SV=1
Length = 73
Score = 32.0 bits (71), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 126 MRVSLHCQGCAGKLKKHLSKME-GVTSFSIDLETKRVTVMGHISPTGVLESISKVKR 181
V + C GC+G + K L+K+E V+ I LE + V V + +LE I K +
Sbjct: 9 FNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGK 65
>sp|Q6FU61|CCS1_CANGA Superoxide dismutase 1 copper chaperone OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CCS1 PE=3 SV=1
Length = 239
Score = 32.0 bits (71), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/61 (21%), Positives = 29/61 (47%)
Query: 121 FQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVK 180
F V +HC C +KK L+ + G+ D+ + ++V ++P+ ++ ++
Sbjct: 7 FYEATYAVPMHCTDCTDDIKKCLNGITGIKDLQFDISQQMMSVNSCVAPSVIINALRDCG 66
Query: 181 R 181
R
Sbjct: 67 R 67
>sp|Q8NUQ9|COPA_STAAW Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
MW2) GN=copA PE=3 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 2.4, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 33/52 (63%)
Query: 130 LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR 181
+ C C+ +++K L+KM+GV + +++L T++ V + T + ++++++
Sbjct: 81 MTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKVDYYPEETDADKLVTRIQK 132
>sp|A8Z3F8|COPA_STAAT Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
USA300 / TCH1516) GN=copA PE=3 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 2.4, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 33/52 (63%)
Query: 130 LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR 181
+ C C+ +++K L+KM+GV + +++L T++ V + T + ++++++
Sbjct: 81 MTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKVDYYPEETDADKLVTRIQK 132
>sp|Q6G6B7|COPA_STAAS Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
MSSA476) GN=copA PE=3 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 2.4, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 33/52 (63%)
Query: 130 LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR 181
+ C C+ +++K L+KM+GV + +++L T++ V + T + ++++++
Sbjct: 81 MTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKVDYYPEETDADKLVTRIQK 132
>sp|Q6GDP1|COPA_STAAR Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
MRSA252) GN=copA PE=3 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 2.4, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 33/52 (63%)
Query: 130 LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR 181
+ C C+ +++K L+KM+GV + +++L T++ V + T + ++++++
Sbjct: 81 MTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKVDYYPEETDADKLVTRIQK 132
>sp|A6QK47|COPA_STAAE Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
Newman) GN=copA PE=3 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 2.4, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 33/52 (63%)
Query: 130 LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR 181
+ C C+ +++K L+KM+GV + +++L T++ V + T + ++++++
Sbjct: 81 MTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKVDYYPEETDADKLVTRIQK 132
>sp|Q5HCZ3|COPA_STAAC Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
COL) GN=copA PE=3 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 2.4, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 33/52 (63%)
Query: 130 LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR 181
+ C C+ +++K L+KM+GV + +++L T++ V + T + ++++++
Sbjct: 81 MTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKVDYYPEETDADKLVTRIQK 132
>sp|Q2YWA3|COPA_STAAB Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=copA PE=3 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 2.4, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 33/52 (63%)
Query: 130 LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR 181
+ C C+ +++K L+KM+GV + +++L T++ V + T + ++++++
Sbjct: 81 MTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKVDYYPEETDADKLVTRIQK 132
>sp|Q2FV64|COPA_STAA8 Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
NCTC 8325) GN=copA PE=1 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 2.4, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 33/52 (63%)
Query: 130 LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR 181
+ C C+ +++K L+KM+GV + +++L T++ V + T + ++++++
Sbjct: 81 MTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKVDYYPEETDADKLVTRIQK 132
>sp|Q2FDV0|COPA_STAA3 Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
USA300) GN=copA PE=3 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 2.4, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 33/52 (63%)
Query: 130 LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR 181
+ C C+ +++K L+KM+GV + +++L T++ V + T + ++++++
Sbjct: 81 MTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKVDYYPEETDADKLVTRIQK 132
>sp|Q6BZU2|CCS1_YARLI Superoxide dismutase 1 copper chaperone OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=CCS1 PE=3 SV=1
Length = 234
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/54 (22%), Positives = 31/54 (57%)
Query: 128 VSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR 181
V L C+ C +K+ L+ ++G+ S L + ++V G +P+ +++++ + +
Sbjct: 9 VPLECESCCDSVKQALANVQGIESVDCKLVDQLISVTGTSAPSQIVKAVQNIGK 62
>sp|Q6GIX1|CADA_STAAR Probable cadmium-transporting ATPase OS=Staphylococcus aureus
(strain MRSA252) GN=cadA PE=3 SV=1
Length = 726
Score = 31.6 bits (70), Expect = 2.8, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 114 LASSDQVFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHIS 168
L QV++V C CAGK +K++ ++ GV ++ ++ V G+ S
Sbjct: 8 LTEDKQVYRVE----GFSCANCAGKFEKNVKQLAGVQDAKVNFGASKIDVYGNAS 58
>sp|P20021|CADA1_STAAU Probable cadmium-transporting ATPase OS=Staphylococcus aureus
GN=cadA PE=3 SV=1
Length = 727
Score = 31.6 bits (70), Expect = 3.1, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 132 CQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHIS 168
C CAGK +K++ K+ GV ++ ++ V G+ S
Sbjct: 23 CANCAGKFEKNVKKIPGVQDAKVNFGASKIDVYGNAS 59
>sp|P71365|Y1050_HAEIN Uncharacterized protein HI_1050 OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1050 PE=4 SV=1
Length = 92
Score = 31.2 bits (69), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 107 MPLIKLPLASSDQVFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMG- 165
+ L + A +++ Q+V+ ++CQ CA + K L + GV S ++ VTV+
Sbjct: 10 LSLFAISFAHANETKQIVLKVKEMNCQLCAYLVNKELRNINGVISTKASIKDGLVTVVED 69
Query: 166 -HISPTGVLESISKVK 180
+++ + ++I K+K
Sbjct: 70 PNVTNQQLFDAIHKLK 85
>sp|P13113|MERP_SERMA Mercuric transport protein periplasmic component OS=Serratia
marcescens GN=merP PE=1 SV=1
Length = 91
Score = 30.8 bits (68), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTV 163
Q V + V + C C +KK +SK+EGV+ ++ ET+ V
Sbjct: 22 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVNVTFETREAVV 64
>sp|P37386|CADA2_STAAU Probable cadmium-transporting ATPase OS=Staphylococcus aureus
GN=cadA PE=3 SV=1
Length = 804
Score = 30.8 bits (68), Expect = 5.1, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 125 VMRVS-LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHIS 168
V RV C CAGK +K++ ++ GV ++ ++ V G+ S
Sbjct: 92 VYRVEGFSCANCAGKFEKNVKQLAGVQDAKVNFGASKIDVYGNAS 136
Score = 30.4 bits (67), Expect = 6.5, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 114 LASSDQVFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMG 165
L QV++V C CAGK +K++ ++ GV ++ ++ V G
Sbjct: 8 LTEDKQVYRVE----GFSCANCAGKFEKNVKELSGVHDAKVNFGASKIDVFG 55
>sp|Q59207|FIXI_BRAJA Nitrogen fixation protein FixI OS=Bradyrhizobium japonicum (strain
USDA 110) GN=fixI PE=3 SV=1
Length = 730
Score = 30.4 bits (67), Expect = 6.3, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 130 LHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTV 163
+HC GC K+++ LS + VT ++L +RV +
Sbjct: 28 VHCAGCMAKIERGLSAIPDVTLARVNLTDRRVAL 61
>sp|P30336|CADA_BACPE Probable cadmium-transporting ATPase OS=Bacillus pseudofirmus
(strain OF4) GN=cadA PE=3 SV=2
Length = 723
Score = 30.4 bits (67), Expect = 7.6, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 132 CQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHIS 168
C CAGK +K++ ++ GV ++ ++ V G+ +
Sbjct: 23 CANCAGKFEKNVKQLSGVEDAKVNFGASKIAVYGNAT 59
>sp|O60078|TYR1_SCHPO Probable prephenate dehydrogenase [NADP(+)] OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=tyr1 PE=2 SV=1
Length = 431
Score = 30.0 bits (66), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 7/51 (13%)
Query: 79 PSTSSIKRQAQDDI-----HSHHDPKPKPNPKSMPLIKLPLASSDQVFQVV 124
P ++ ++ +D+ HS H PK NPKS PL+ + +SD+ F++V
Sbjct: 102 PEMNAFEKYLPEDVDIISCHSMHGPKV--NPKSQPLVIIRHRASDEHFEIV 150
>sp|P94186|MERP_ALCSP Mercuric transport protein periplasmic component OS=Alcaligenes sp.
GN=merP PE=3 SV=1
Length = 91
Score = 30.0 bits (66), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTV 163
Q V + V + C C +KK +SK+EGV+ + ET+ V
Sbjct: 22 QTVTLSVPGMTCSTCPITVKKAISKVEGVSKIDVTFETREAVV 64
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.130 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,469,144
Number of Sequences: 539616
Number of extensions: 2678180
Number of successful extensions: 7088
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 7042
Number of HSP's gapped (non-prelim): 67
length of query: 187
length of database: 191,569,459
effective HSP length: 111
effective length of query: 76
effective length of database: 131,672,083
effective search space: 10007078308
effective search space used: 10007078308
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)