Query 029814
Match_columns 187
No_of_seqs 173 out of 1099
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 06:00:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029814.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029814hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.5 4.7E-14 1.6E-18 95.2 9.0 66 121-187 1-67 (68)
2 3dxs_X Copper-transporting ATP 99.4 7.3E-13 2.5E-17 89.5 8.6 66 121-186 1-71 (74)
3 3fry_A Probable copper-exporti 99.4 8.7E-13 3E-17 89.9 8.6 66 119-186 2-69 (73)
4 4a4j_A Pacszia, cation-transpo 99.4 1.6E-12 5.3E-17 86.6 9.6 64 122-185 2-69 (69)
5 1cc8_A Protein (metallochapero 99.3 6.3E-12 2.2E-16 85.0 9.3 66 121-186 4-71 (73)
6 2xmm_A SSR2857 protein, ATX1; 99.2 3.3E-11 1.1E-15 77.2 7.1 58 124-181 3-61 (64)
7 2roe_A Heavy metal binding pro 99.2 3.1E-11 1.1E-15 79.2 6.6 61 125-185 3-65 (66)
8 2l3m_A Copper-ION-binding prot 99.2 1.5E-10 5.1E-15 75.9 9.6 62 120-181 3-68 (71)
9 1aw0_A Menkes copper-transport 99.2 1.3E-10 4.4E-15 76.2 8.8 64 122-185 3-71 (72)
10 2xmw_A PACS-N, cation-transpor 99.2 1.6E-10 5.3E-15 75.4 9.1 64 122-185 3-70 (71)
11 1osd_A MERP, hypothetical prot 99.2 1.8E-10 6.3E-15 75.5 9.4 64 122-185 3-71 (72)
12 2crl_A Copper chaperone for su 99.2 1.3E-10 4.5E-15 84.4 9.4 66 121-186 18-84 (98)
13 1kvi_A Copper-transporting ATP 99.2 1.7E-10 5.7E-15 77.7 8.6 67 120-186 6-77 (79)
14 3cjk_B Copper-transporting ATP 99.2 3.2E-10 1.1E-14 75.4 9.7 64 123-186 3-71 (75)
15 1cpz_A Protein (COPZ); copper 99.1 2.1E-10 7.3E-15 74.1 8.5 61 125-185 3-68 (68)
16 1mwy_A ZNTA; open-faced beta-s 99.1 2.9E-10 1E-14 75.6 9.4 64 121-184 2-68 (73)
17 2kt2_A Mercuric reductase; nme 99.1 2.3E-10 7.7E-15 74.8 7.9 62 125-186 3-68 (69)
18 1y3j_A Copper-transporting ATP 99.1 1.3E-10 4.5E-15 78.1 6.8 66 121-186 2-72 (77)
19 2k2p_A Uncharacterized protein 99.1 1.7E-10 5.8E-15 81.7 7.7 63 119-181 19-82 (85)
20 2g9o_A Copper-transporting ATP 99.1 3.2E-10 1.1E-14 80.2 9.1 66 122-187 3-76 (90)
21 2qif_A Copper chaperone COPZ; 99.1 5.6E-10 1.9E-14 71.3 9.3 61 121-181 1-65 (69)
22 1fvq_A Copper-transporting ATP 99.1 3E-10 1E-14 74.4 7.8 64 123-186 3-70 (72)
23 1opz_A Potential copper-transp 99.1 4.4E-10 1.5E-14 73.9 8.7 66 120-185 4-74 (76)
24 1q8l_A Copper-transporting ATP 99.1 4.6E-10 1.6E-14 77.5 8.6 66 121-186 8-78 (84)
25 1jww_A Potential copper-transp 99.1 4.8E-10 1.6E-14 75.1 7.7 66 121-186 2-72 (80)
26 2ldi_A Zinc-transporting ATPas 99.1 6.9E-10 2.3E-14 71.7 8.0 61 121-181 2-66 (71)
27 1yg0_A COP associated protein; 99.1 5.4E-10 1.8E-14 71.8 7.4 59 123-181 2-63 (66)
28 2kyz_A Heavy metal binding pro 99.1 4.4E-10 1.5E-14 73.9 7.1 60 124-185 3-64 (67)
29 1yjr_A Copper-transporting ATP 99.0 7.2E-10 2.5E-14 73.1 7.1 63 123-185 5-72 (75)
30 2ew9_A Copper-transporting ATP 99.0 1.1E-09 3.9E-14 81.7 8.6 64 122-185 80-148 (149)
31 2kkh_A Putative heavy metal tr 99.0 3.5E-09 1.2E-13 74.9 9.7 69 118-186 12-85 (95)
32 1p6t_A Potential copper-transp 99.0 1.8E-09 6.3E-14 81.1 8.0 65 122-186 74-143 (151)
33 2ofg_X Zinc-transporting ATPas 98.9 4E-09 1.4E-13 77.6 9.1 64 120-183 6-74 (111)
34 2aj0_A Probable cadmium-transp 98.9 4.9E-09 1.7E-13 69.4 7.0 56 122-181 3-59 (71)
35 2rop_A Copper-transporting ATP 98.9 1.1E-08 3.7E-13 81.7 9.5 65 122-186 122-191 (202)
36 2ew9_A Copper-transporting ATP 98.8 1.4E-08 4.7E-13 75.8 8.8 65 121-185 3-72 (149)
37 1qup_A Superoxide dismutase 1 98.8 1.4E-08 5E-13 84.7 9.4 65 122-186 6-71 (222)
38 1jk9_B CCS, copper chaperone f 98.7 6.2E-08 2.1E-12 82.4 8.7 63 123-185 8-71 (249)
39 2rop_A Copper-transporting ATP 98.5 3E-07 1E-11 73.3 8.3 61 119-179 17-81 (202)
40 1p6t_A Potential copper-transp 98.5 5.1E-07 1.7E-11 67.6 8.1 61 121-181 5-69 (151)
41 3j09_A COPA, copper-exporting 98.3 1.1E-06 3.8E-11 83.9 8.0 59 123-181 3-65 (723)
42 3bpd_A Uncharacterized protein 76.8 3.3 0.00011 30.6 4.4 60 121-181 6-74 (100)
43 2x3d_A SSO6206; unknown functi 75.4 5 0.00017 29.5 5.0 60 121-181 4-73 (96)
44 2raq_A Conserved protein MTH88 74.7 4.5 0.00015 29.8 4.6 60 121-181 6-74 (97)
45 3cq1_A Putative uncharacterize 52.4 14 0.00048 26.2 3.7 36 123-158 42-83 (103)
46 3lno_A Putative uncharacterize 50.0 15 0.00052 26.3 3.6 35 124-158 46-87 (108)
47 1uwd_A Hypothetical protein TM 48.8 13 0.00045 26.3 3.0 34 124-157 44-83 (103)
48 4gwb_A Peptide methionine sulf 45.7 60 0.0021 25.7 6.7 44 133-176 9-70 (168)
49 1fvg_A Peptide methionine sulf 44.6 51 0.0018 26.9 6.3 36 120-160 42-77 (199)
50 3bqh_A PILB, peptide methionin 40.4 64 0.0022 26.1 6.2 28 133-160 9-36 (193)
51 2jsx_A Protein NAPD; TAT, proo 39.6 96 0.0033 21.9 6.4 43 135-177 18-61 (95)
52 2j89_A Methionine sulfoxide re 38.3 69 0.0024 27.3 6.3 36 120-160 93-128 (261)
53 1ff3_A Peptide methionine sulf 36.2 84 0.0029 25.8 6.3 35 120-159 41-75 (211)
54 3e0m_A Peptide methionine sulf 33.9 80 0.0027 27.5 6.1 35 121-160 2-36 (313)
55 3s6n_M SurviVal motor neuron p 32.6 3.6 0.00012 25.1 -1.8 15 49-63 10-25 (37)
56 1nwa_A Peptide methionine sulf 32.0 1.1E+02 0.0039 24.9 6.4 50 122-176 26-93 (203)
57 3lvj_C Sulfurtransferase TUSA; 29.7 1.3E+02 0.0044 20.2 6.2 49 124-181 11-62 (82)
58 1jdq_A TM006 protein, hypothet 29.6 1.5E+02 0.0051 20.9 6.1 49 124-181 27-78 (98)
59 1owx_A Lupus LA protein, SS-B, 27.3 1.6E+02 0.0054 21.7 6.1 56 124-179 19-76 (121)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.53 E-value=4.7e-14 Score=95.21 Aligned_cols=66 Identities=26% Similarity=0.497 Sum_probs=61.3
Q ss_pred eeEEEEEecccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC-eEeccC
Q 029814 121 FQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR-AEFWPC 187 (187)
Q Consensus 121 ~~tv~f~VGM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk-AeL~s~ 187 (187)
|.+.+|.|||+|.+|+.+|+++|++++|| ++++|+.+++++|.+..++++|.++|++.|| +++|++
T Consensus 1 m~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~ 67 (68)
T 3iwl_A 1 MPKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGL 67 (68)
T ss_dssp -CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEEC
T ss_pred CceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecCC
Confidence 35678888999999999999999999999 9999999999999998999999999999998 999874
No 2
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.42 E-value=7.3e-13 Score=89.51 Aligned_cols=66 Identities=21% Similarity=0.379 Sum_probs=60.8
Q ss_pred eeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEecc
Q 029814 121 FQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFWP 186 (187)
Q Consensus 121 ~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~s 186 (187)
|++++|.| ||+|.+|+.+|+++|++++||..+.+|+.+++++|..+ ++.++|.++|++.|| +++++
T Consensus 1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (74)
T 3dxs_X 1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILA 71 (74)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEE
T ss_pred CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEcc
Confidence 56789999 99999999999999999999999999999999999853 689999999999998 88764
No 3
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.41 E-value=8.7e-13 Score=89.85 Aligned_cols=66 Identities=18% Similarity=0.358 Sum_probs=61.6
Q ss_pred CceeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC-eEecc
Q 029814 119 QVFQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR-AEFWP 186 (187)
Q Consensus 119 ~~~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk-AeL~s 186 (187)
..|.+++|.| ||+|.+|+.+|+++|++ +||..+.+|+.+++++|.++ +.+.|.++|++.|| +++++
T Consensus 2 ~~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~~ 69 (73)
T 3fry_A 2 DSVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLRS 69 (73)
T ss_dssp CCCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEECC
T ss_pred CccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEecC
Confidence 3577889999 99999999999999999 99999999999999999988 99999999999999 88865
No 4
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.41 E-value=1.6e-12 Score=86.57 Aligned_cols=64 Identities=19% Similarity=0.505 Sum_probs=59.4
Q ss_pred eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEE--ecCCHHHHHHHHHhCCC-eEec
Q 029814 122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVM--GHISPTGVLESISKVKR-AEFW 185 (187)
Q Consensus 122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~--g~v~~eeIveaIekaGk-AeL~ 185 (187)
++++|.| ||+|.+|+.+|+++|++++||..+.+|+.+++++|. ...+.++|.++|++.|| ++++
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~ 69 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL 69 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEEC
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEeC
Confidence 4678999 999999999999999999999999999999999998 45789999999999998 8775
No 5
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.34 E-value=6.3e-12 Score=85.01 Aligned_cols=66 Identities=29% Similarity=0.464 Sum_probs=61.6
Q ss_pred eeEEEEEecccchhHHHHHHHHhhccC-CceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC-eEecc
Q 029814 121 FQVVVMRVSLHCQGCAGKLKKHLSKME-GVTSFSIDLETKRVTVMGHISPTGVLESISKVKR-AEFWP 186 (187)
Q Consensus 121 ~~tv~f~VGM~C~sCa~kIekaL~~l~-GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk-AeL~s 186 (187)
+.+++|.|+|+|.+|+.+|+++|++++ ||.++++|+.+++++|.+..+.++|.+.|++.|| +++|+
T Consensus 4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (73)
T 1cc8_A 4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGK 71 (73)
T ss_dssp CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEEE
T ss_pred ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceeee
Confidence 566788999999999999999999999 9999999999999999988899999999999998 88875
No 6
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.22 E-value=3.3e-11 Score=77.18 Aligned_cols=58 Identities=19% Similarity=0.452 Sum_probs=55.1
Q ss_pred EEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC
Q 029814 124 VVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR 181 (187)
Q Consensus 124 v~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk 181 (187)
.+|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|.+..+.+.|.+.|++.||
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~ 61 (64)
T 2xmm_A 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGY 61 (64)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTC
T ss_pred EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCC
Confidence 57999 99999999999999999999999999999999999977889999999999997
No 7
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=99.20 E-value=3.1e-11 Score=79.16 Aligned_cols=61 Identities=25% Similarity=0.482 Sum_probs=56.0
Q ss_pred EEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC-eEec
Q 029814 125 VMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR-AEFW 185 (187)
Q Consensus 125 ~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk-AeL~ 185 (187)
+|.| ||+|.+|..+|+++|.+++||.++.+|+..++++|.+..+.+.|.+.|++.|| ++.+
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~ 65 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEVL 65 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEEEC
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcEec
Confidence 5899 99999999999999999999999999999999999655789999999999998 6554
No 8
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.20 E-value=1.5e-10 Score=75.91 Aligned_cols=62 Identities=15% Similarity=0.385 Sum_probs=56.7
Q ss_pred ceeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC
Q 029814 120 VFQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR 181 (187)
Q Consensus 120 ~~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk 181 (187)
.|.+.+|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|..+ .+.+.|.+.|++.||
T Consensus 3 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~ 68 (71)
T 2l3m_A 3 AMEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGY 68 (71)
T ss_dssp SEEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTC
T ss_pred CcEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCC
Confidence 466788999 99999999999999999999999999999999999743 678899999999998
No 9
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.18 E-value=1.3e-10 Score=76.23 Aligned_cols=64 Identities=25% Similarity=0.381 Sum_probs=57.7
Q ss_pred eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEec
Q 029814 122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFW 185 (187)
Q Consensus 122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~ 185 (187)
++.+|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|.++ .+.+.|.+.|++.|| +++.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 71 (72)
T 1aw0_A 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS 71 (72)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEeC
Confidence 3568999 99999999999999999999999999999999999853 578899999999998 7665
No 10
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.18 E-value=1.6e-10 Score=75.41 Aligned_cols=64 Identities=19% Similarity=0.480 Sum_probs=56.8
Q ss_pred eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec--CCHHHHHHHHHhCCC-eEec
Q 029814 122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH--ISPTGVLESISKVKR-AEFW 185 (187)
Q Consensus 122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~--v~~eeIveaIekaGk-AeL~ 185 (187)
++.+|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|..+ .+.+.|.+.|++.|| +.++
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~ 70 (71)
T 2xmw_A 3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL 70 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEEEE
T ss_pred cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCceeC
Confidence 5678999 99999999999999999999999999999999999853 678889999999998 6543
No 11
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.18 E-value=1.8e-10 Score=75.47 Aligned_cols=64 Identities=25% Similarity=0.411 Sum_probs=57.6
Q ss_pred eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEec
Q 029814 122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFW 185 (187)
Q Consensus 122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~ 185 (187)
.++.|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|.++ .+.+.|.+.|++.|| +++.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 71 (72)
T 1osd_A 3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK 71 (72)
T ss_dssp EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred eEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEec
Confidence 4678999 99999999999999999999999999999999999743 578899999999998 6654
No 12
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.18 E-value=1.3e-10 Score=84.45 Aligned_cols=66 Identities=23% Similarity=0.378 Sum_probs=60.9
Q ss_pred eeEEEEEecccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC-eEecc
Q 029814 121 FQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR-AEFWP 186 (187)
Q Consensus 121 ~~tv~f~VGM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk-AeL~s 186 (187)
+.+++|.|.|+|.+|+.+|+++|.+++||..+.+|+.+++++|.+..+.+.|.++|++.|| +++|.
T Consensus 18 ~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~ 84 (98)
T 2crl_A 18 LCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKG 84 (98)
T ss_dssp CEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEE
T ss_pred ceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEcc
Confidence 4566788899999999999999999999999999999999999988899999999999998 88764
No 13
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.16 E-value=1.7e-10 Score=77.75 Aligned_cols=67 Identities=22% Similarity=0.436 Sum_probs=59.9
Q ss_pred ceeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEecc
Q 029814 120 VFQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFWP 186 (187)
Q Consensus 120 ~~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~s 186 (187)
...+++|.| ||+|.+|+.+|+++|.+++||..+.+|+..+++.|..+ .+.+.|.+.|++.|| +++.+
T Consensus 6 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 77 (79)
T 1kvi_A 6 GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 77 (79)
T ss_dssp TCEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEECC
T ss_pred CcEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEecC
Confidence 356678999 99999999999999999999999999999999999853 578899999999998 77765
No 14
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.15 E-value=3.2e-10 Score=75.41 Aligned_cols=64 Identities=23% Similarity=0.469 Sum_probs=57.5
Q ss_pred EEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEecc
Q 029814 123 VVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFWP 186 (187)
Q Consensus 123 tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~s 186 (187)
+++|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|..+ .+.+.|.+.|++.|| +++++
T Consensus 3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (75)
T 3cjk_B 3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 71 (75)
T ss_dssp EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEeec
Confidence 467999 99999999999999999999999999999999999853 578899999999998 76653
No 15
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.15 E-value=2.1e-10 Score=74.15 Aligned_cols=61 Identities=18% Similarity=0.457 Sum_probs=55.7
Q ss_pred EEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEec
Q 029814 125 VMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFW 185 (187)
Q Consensus 125 ~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~ 185 (187)
+|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|..+ .+.+.|.+.|++.|| ++++
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 68 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEVI 68 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEEC
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcccC
Confidence 5899 99999999999999999999999999999999999853 578899999999998 7664
No 16
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.15 E-value=2.9e-10 Score=75.62 Aligned_cols=64 Identities=17% Similarity=0.272 Sum_probs=56.7
Q ss_pred eeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecC-CHHHHHHHHHhCCC-eEe
Q 029814 121 FQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHI-SPTGVLESISKVKR-AEF 184 (187)
Q Consensus 121 ~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v-~~eeIveaIekaGk-AeL 184 (187)
|.+++|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|.++. ..+.|.+.|++.|| +..
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~~ 68 (73)
T 1mwy_A 2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRD 68 (73)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEEEE
T ss_pred CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCcccc
Confidence 56788999 999999999999999999999999999999999998542 36788999999998 543
No 17
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.12 E-value=2.3e-10 Score=74.83 Aligned_cols=62 Identities=19% Similarity=0.372 Sum_probs=55.9
Q ss_pred EEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec--CCHHHHHHHHHhCCC-eEecc
Q 029814 125 VMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH--ISPTGVLESISKVKR-AEFWP 186 (187)
Q Consensus 125 ~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~--v~~eeIveaIekaGk-AeL~s 186 (187)
+|.| ||+|.+|..+|+++|.+++||..+.+|+..+++.|..+ .+.++|.+.|++.|| +.+.+
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~~ 68 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKATLAD 68 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEECCC
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceEeCC
Confidence 5899 99999999999999999999999999999999999743 578899999999998 76653
No 18
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=99.12 E-value=1.3e-10 Score=78.10 Aligned_cols=66 Identities=21% Similarity=0.375 Sum_probs=59.3
Q ss_pred eeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEecc
Q 029814 121 FQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFWP 186 (187)
Q Consensus 121 ~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~s 186 (187)
|.+.+|.| ||+|.+|..+|+++|.+++||..+.+|+..+++.|..+ .+.+.|.+.|++.|| +.++.
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 72 (77)
T 1y3j_A 2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIE 72 (77)
T ss_dssp CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEES
T ss_pred CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEECC
Confidence 66788999 99999999999999999999999999999999999853 578899999999998 76654
No 19
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=99.12 E-value=1.7e-10 Score=81.70 Aligned_cols=63 Identities=21% Similarity=0.249 Sum_probs=57.1
Q ss_pred CceeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC
Q 029814 119 QVFQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR 181 (187)
Q Consensus 119 ~~~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk 181 (187)
..+.+.+|.| ||+|.+|+.+|+++|.+++||..+.+|+.+++++|.+..+.+.|.++|+++||
T Consensus 19 ~~~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy 82 (85)
T 2k2p_A 19 FQGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGY 82 (85)
T ss_dssp ---CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTC
T ss_pred ccccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCC
Confidence 3445678999 99999999999999999999999999999999999987889999999999998
No 20
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.12 E-value=3.2e-10 Score=80.19 Aligned_cols=66 Identities=20% Similarity=0.425 Sum_probs=58.7
Q ss_pred eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhC---CC-eEeccC
Q 029814 122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKV---KR-AEFWPC 187 (187)
Q Consensus 122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIeka---Gk-AeL~s~ 187 (187)
.+++|.| ||+|.+|+.+|+++|.+++||..+++|+.++++.|..+ ++.+.|.++|++. || +.++++
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~ 76 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSE 76 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCC
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCC
Confidence 3568999 99999999999999999999999999999999999843 5788999999999 58 887753
No 21
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.12 E-value=5.6e-10 Score=71.33 Aligned_cols=61 Identities=20% Similarity=0.457 Sum_probs=55.3
Q ss_pred eeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC
Q 029814 121 FQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR 181 (187)
Q Consensus 121 ~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk 181 (187)
|.+.+|.| ||+|.+|..+|++.|..++||..+.+|+..+++.|..+ .+.+.|.+.|++.||
T Consensus 1 m~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~ 65 (69)
T 2qif_A 1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGY 65 (69)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTC
T ss_pred CeEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCC
Confidence 34568999 99999999999999999999999999999999999743 578899999999998
No 22
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=99.11 E-value=3e-10 Score=74.45 Aligned_cols=64 Identities=23% Similarity=0.439 Sum_probs=57.7
Q ss_pred EEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec--CCHHHHHHHHHhCCC-eEecc
Q 029814 123 VVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH--ISPTGVLESISKVKR-AEFWP 186 (187)
Q Consensus 123 tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~--v~~eeIveaIekaGk-AeL~s 186 (187)
++.|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|..+ .+.+.|.+.|++.|| +++++
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~ 70 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR 70 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEcc
Confidence 467999 99999999999999999999999999999999999853 578899999999998 77764
No 23
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=99.11 E-value=4.4e-10 Score=73.94 Aligned_cols=66 Identities=27% Similarity=0.474 Sum_probs=58.7
Q ss_pred ceeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEe---cCCHHHHHHHHHhCCC-eEec
Q 029814 120 VFQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMG---HISPTGVLESISKVKR-AEFW 185 (187)
Q Consensus 120 ~~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g---~v~~eeIveaIekaGk-AeL~ 185 (187)
.+.+..|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|.. ..+.+.|.+.|++.|| ++++
T Consensus 4 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 74 (76)
T 1opz_A 4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVIE 74 (76)
T ss_dssp CCEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEECC
T ss_pred cceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceecC
Confidence 356778999 9999999999999999999999999999999999974 2578899999999998 6654
No 24
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.09 E-value=4.6e-10 Score=77.45 Aligned_cols=66 Identities=21% Similarity=0.403 Sum_probs=59.1
Q ss_pred eeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEecc
Q 029814 121 FQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFWP 186 (187)
Q Consensus 121 ~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~s 186 (187)
..+++|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|..+ ++.+.|.+.|++.|| +++++
T Consensus 8 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 78 (84)
T 1q8l_A 8 EVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKK 78 (84)
T ss_dssp CEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSC
T ss_pred ceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecC
Confidence 35678999 99999999999999999999999999999999999853 578899999999998 77654
No 25
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=99.07 E-value=4.8e-10 Score=75.06 Aligned_cols=66 Identities=23% Similarity=0.422 Sum_probs=58.6
Q ss_pred eeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEecc
Q 029814 121 FQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFWP 186 (187)
Q Consensus 121 ~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~s 186 (187)
|.+..|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|..+ .+.+.|.+.|++.|| +.+++
T Consensus 2 m~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 72 (80)
T 1jww_A 2 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKG 72 (80)
T ss_dssp CEEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECC
T ss_pred ceEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecC
Confidence 45678999 99999999999999999999999999999999999743 578889999999998 76653
No 26
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=99.06 E-value=6.9e-10 Score=71.70 Aligned_cols=61 Identities=26% Similarity=0.511 Sum_probs=55.2
Q ss_pred eeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC
Q 029814 121 FQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR 181 (187)
Q Consensus 121 ~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk 181 (187)
+.+.+|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|..+ .+.+.+.+.|++.||
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~ 66 (71)
T 2ldi_A 2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGY 66 (71)
T ss_dssp CEEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTC
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCC
Confidence 35578999 99999999999999999999999999999999999743 577889999999998
No 27
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=99.06 E-value=5.4e-10 Score=71.82 Aligned_cols=59 Identities=24% Similarity=0.440 Sum_probs=53.9
Q ss_pred EEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec--CCHHHHHHHHHhCCC
Q 029814 123 VVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH--ISPTGVLESISKVKR 181 (187)
Q Consensus 123 tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~--v~~eeIveaIekaGk 181 (187)
+.+|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|..+ .+.+.|.+.|++.||
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~ 63 (66)
T 1yg0_A 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQ 63 (66)
T ss_dssp EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTC
T ss_pred eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCC
Confidence 357899 99999999999999999999999999999999999853 478889999999997
No 28
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=99.06 E-value=4.4e-10 Score=73.91 Aligned_cols=60 Identities=25% Similarity=0.527 Sum_probs=54.0
Q ss_pred EEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC-eEec
Q 029814 124 VVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR-AEFW 185 (187)
Q Consensus 124 v~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk-AeL~ 185 (187)
.+|.| ||+|.+|..+|+++|.++ ||..+.+|+..+++.|..+.. +.|.+.|++.|| +.++
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy~~~~~ 64 (67)
T 2kyz_A 3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDYPVESY 64 (67)
T ss_dssp EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTCCCCBC
T ss_pred EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCCceeeE
Confidence 57999 999999999999999999 999999999999999986555 889999999998 5543
No 29
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=99.03 E-value=7.2e-10 Score=73.11 Aligned_cols=63 Identities=22% Similarity=0.462 Sum_probs=56.0
Q ss_pred EEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEec
Q 029814 123 VVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFW 185 (187)
Q Consensus 123 tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~ 185 (187)
++.|.| ||+|.+|..+|++.|.+++||..+.+|+..+++.|.++ .+.+.|.+.|++.|| +.+.
T Consensus 5 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 72 (75)
T 1yjr_A 5 VLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSLV 72 (75)
T ss_dssp CEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEES
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCceee
Confidence 457999 99999999999999999999999999999999999854 456889999999998 6654
No 30
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.01 E-value=1.1e-09 Score=81.71 Aligned_cols=64 Identities=20% Similarity=0.434 Sum_probs=58.1
Q ss_pred eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEec
Q 029814 122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFW 185 (187)
Q Consensus 122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~ 185 (187)
.++.|.| ||+|.+|+.+|+++|++++||..+.+|+.++++.|.++ ++.++|.++|++.|| ++++
T Consensus 80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 148 (149)
T 2ew9_A 80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASLA 148 (149)
T ss_dssp SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEECC
T ss_pred ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEec
Confidence 3568999 99999999999999999999999999999999999853 578999999999998 7765
No 31
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=98.98 E-value=3.5e-09 Score=74.86 Aligned_cols=69 Identities=19% Similarity=0.346 Sum_probs=60.5
Q ss_pred CCceeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEecc
Q 029814 118 DQVFQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFWP 186 (187)
Q Consensus 118 ~~~~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~s 186 (187)
...|.+..|.| ||+|.+|...|++.|..++||..+.+|+..+.+.|..+ ++.+.|.+.|+..|| +.++.
T Consensus 12 ~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 85 (95)
T 2kkh_A 12 VKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRV 85 (95)
T ss_dssp SSCSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESC
T ss_pred ccceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEec
Confidence 34567789999 99999999999999999999999999999999999853 478899999999998 66643
No 32
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.96 E-value=1.8e-09 Score=81.13 Aligned_cols=65 Identities=23% Similarity=0.440 Sum_probs=59.0
Q ss_pred eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEecc
Q 029814 122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFWP 186 (187)
Q Consensus 122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~s 186 (187)
.++.|.| ||+|.+|+++|+++|.+++||..+.+|+.++++.|..+ ++.+.|.+.|++.|| +.+++
T Consensus 74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 143 (151)
T 1p6t_A 74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKG 143 (151)
T ss_dssp EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESC
T ss_pred cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcC
Confidence 4578999 99999999999999999999999999999999999843 688999999999998 77764
No 33
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=98.94 E-value=4e-09 Score=77.62 Aligned_cols=64 Identities=25% Similarity=0.431 Sum_probs=57.7
Q ss_pred ceeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eE
Q 029814 120 VFQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AE 183 (187)
Q Consensus 120 ~~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-Ae 183 (187)
.+.+++|.| ||+|.+|+.+|+++|++++||..+.+|+.++++.|..+ .+.+.|.+.|++.|| +.
T Consensus 6 ~~~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~~~Gy~~~ 74 (111)
T 2ofg_X 6 PLKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA 74 (111)
T ss_dssp CCEEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHHTTTCCEE
T ss_pred cceEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHHHcCCeee
Confidence 356788999 99999999999999999999999999999999999853 578899999999998 44
No 34
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.88 E-value=4.9e-09 Score=69.37 Aligned_cols=56 Identities=29% Similarity=0.622 Sum_probs=49.3
Q ss_pred eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC
Q 029814 122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR 181 (187)
Q Consensus 122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk 181 (187)
.+.+|.| ||+|.+|..+|+++|.+++||..+.+|+..+++.|.+... .+.|+++||
T Consensus 3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~Gy 59 (71)
T 2aj0_A 3 EKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAGA 59 (71)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHHT
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhCC
Confidence 3568999 9999999999999999999999999999999999987654 456777886
No 35
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.86 E-value=1.1e-08 Score=81.73 Aligned_cols=65 Identities=23% Similarity=0.453 Sum_probs=58.5
Q ss_pred eEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC-eEecc
Q 029814 122 QVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR-AEFWP 186 (187)
Q Consensus 122 ~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk-AeL~s 186 (187)
.++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..+++.|..+ ++.+.|.+.|++.|| +.+++
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 191 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVS 191 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC-
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcC
Confidence 4678999 99999999999999999999999999999999999853 578999999999998 77764
No 36
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.83 E-value=1.4e-08 Score=75.75 Aligned_cols=65 Identities=20% Similarity=0.366 Sum_probs=57.9
Q ss_pred eeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEe---cCCHHHHHHHHHhCCC-eEec
Q 029814 121 FQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMG---HISPTGVLESISKVKR-AEFW 185 (187)
Q Consensus 121 ~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g---~v~~eeIveaIekaGk-AeL~ 185 (187)
|++++|.| ||+|.+|..+|++.|.+++||..+.+|+.++++.|.. ..+.+.+.+.|++.|| +.++
T Consensus 3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 72 (149)
T 2ew9_A 3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVM 72 (149)
T ss_dssp CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEee
Confidence 67789999 9999999999999999999999999999999999874 2577889999999998 5543
No 37
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.82 E-value=1.4e-08 Score=84.72 Aligned_cols=65 Identities=18% Similarity=0.506 Sum_probs=59.7
Q ss_pred eEEEEEecccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC-eEecc
Q 029814 122 QVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR-AEFWP 186 (187)
Q Consensus 122 ~tv~f~VGM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk-AeL~s 186 (187)
.+++|.|.|+|.+|+.+|+++|++++||.++++|+.+++++|.+..+.++|.++|++.|| ++++.
T Consensus 6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~ 71 (222)
T 1qup_A 6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRG 71 (222)
T ss_dssp EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEEC
T ss_pred eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCcccccc
Confidence 456788899999999999999999999999999999999999988899999999999998 77764
No 38
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.67 E-value=6.2e-08 Score=82.38 Aligned_cols=63 Identities=19% Similarity=0.540 Sum_probs=58.3
Q ss_pred EEEEEecccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhCCC-eEec
Q 029814 123 VVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKVKR-AEFW 185 (187)
Q Consensus 123 tv~f~VGM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIekaGk-AeL~ 185 (187)
+++|.|.|+|.+|+.+|+++|.+++||.++++|+.+++++|.+..+.++|.++|++.|| ++++
T Consensus 8 ~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~ 71 (249)
T 1jk9_B 8 EATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIR 71 (249)
T ss_dssp EEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEE
T ss_pred eEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccc
Confidence 45788889999999999999999999999999999999999987899999999999998 7664
No 39
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.52 E-value=3e-07 Score=73.27 Aligned_cols=61 Identities=23% Similarity=0.509 Sum_probs=53.4
Q ss_pred CceeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhC
Q 029814 119 QVFQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKV 179 (187)
Q Consensus 119 ~~~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIeka 179 (187)
..+.+++|.| ||+|.+|+.+|+++|.+++||..+.+++..+++.|..+ .+.+.|.+.|++.
T Consensus 17 ~~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~ 81 (202)
T 2rop_A 17 SHVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEAL 81 (202)
T ss_dssp ---CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTS
T ss_pred CccEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHh
Confidence 3456678999 99999999999999999999999999999999999743 5788899999988
No 40
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.47 E-value=5.1e-07 Score=67.60 Aligned_cols=61 Identities=30% Similarity=0.551 Sum_probs=54.1
Q ss_pred eeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC
Q 029814 121 FQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR 181 (187)
Q Consensus 121 ~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk 181 (187)
+.+..|.| ||+|.+|..+|++.|.+++||..+.+++..+++.+... .+...+.+.+++.||
T Consensus 5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~ 69 (151)
T 1p6t_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGY 69 (151)
T ss_dssp CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTC
T ss_pred ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCC
Confidence 35578999 99999999999999999999999999999999998742 577889999998887
No 41
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.30 E-value=1.1e-06 Score=83.87 Aligned_cols=59 Identities=19% Similarity=0.340 Sum_probs=54.9
Q ss_pred EEEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhCCC
Q 029814 123 VVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH---ISPTGVLESISKVKR 181 (187)
Q Consensus 123 tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~---v~~eeIveaIekaGk 181 (187)
+++|.| ||+|.+|+.+|++.|.+++||.++++|+.++++.|..+ .+.+++.++|++.||
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy 65 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGY 65 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCC
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCC
Confidence 367999 99999999999999999999999999999999999853 689999999999997
No 42
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=76.84 E-value=3.3 Score=30.65 Aligned_cols=60 Identities=22% Similarity=0.334 Sum_probs=40.2
Q ss_pred eeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEec-----CCCE--EEEEec-CCHHHHHHHHHhCCC
Q 029814 121 FQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDL-----ETKR--VTVMGH-ISPTGVLESISKVKR 181 (187)
Q Consensus 121 ~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl-----~s~k--VtV~g~-v~~eeIveaIekaGk 181 (187)
..++.|-| --+-++ .-.+-+.|..++||..+++.+ .+.. ++|+|. ++.++|.++|++.|-
T Consensus 6 iRRlVLDVlKPh~P~-ivdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~Gg 74 (100)
T 3bpd_A 6 LRRLVLDVLKPHEPK-TIVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGG 74 (100)
T ss_dssp EEEEEEEEEEESCSC-HHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTC
T ss_pred ceEEEEEecCCCCCC-HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCC
Confidence 45566666 334443 335667788999988776543 3343 444564 999999999999983
No 43
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=75.43 E-value=5 Score=29.49 Aligned_cols=60 Identities=18% Similarity=0.336 Sum_probs=40.4
Q ss_pred eeEEEEEe--cccchhHHHHHHHHhhccCCceEEEEec-----CCCE--EEEEec-CCHHHHHHHHHhCCC
Q 029814 121 FQVVVMRV--SLHCQGCAGKLKKHLSKMEGVTSFSIDL-----ETKR--VTVMGH-ISPTGVLESISKVKR 181 (187)
Q Consensus 121 ~~tv~f~V--GM~C~sCa~kIekaL~~l~GV~sV~Vdl-----~s~k--VtV~g~-v~~eeIveaIekaGk 181 (187)
..++.|-| .++-++ .-.+-+.|..++||..+++.+ .+.. ++|+|. ++.++|.++|++.|-
T Consensus 4 irRlVLDVlKP~h~P~-ivd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg 73 (96)
T 2x3d_A 4 IRRLVLDVLKPIRGTS-IVDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGC 73 (96)
T ss_dssp EEEEEEEEEEESSSSC-HHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTC
T ss_pred eEEEEEEcccCCCCCC-HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCC
Confidence 34555665 445554 335667788999988776543 3333 444564 999999999999983
No 44
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=74.68 E-value=4.5 Score=29.79 Aligned_cols=60 Identities=20% Similarity=0.298 Sum_probs=40.3
Q ss_pred eeEEEEEe-cccchhHHHHHHHHhhccCCceEEEEe-----cCCCEEE--EEec-CCHHHHHHHHHhCCC
Q 029814 121 FQVVVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSID-----LETKRVT--VMGH-ISPTGVLESISKVKR 181 (187)
Q Consensus 121 ~~tv~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vd-----l~s~kVt--V~g~-v~~eeIveaIekaGk 181 (187)
..++.|-| --+-++ .-.+-+.|..++||..+++. ..+..+. |+|. ++.++|.++|++.|-
T Consensus 6 irRlVLDVlKPh~p~-i~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg 74 (97)
T 2raq_A 6 LIRIVLDILKPHEPI-IPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGG 74 (97)
T ss_dssp EEEEEEEEECCSCSC-HHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTC
T ss_pred ceEEEEEecCCCCCC-HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCC
Confidence 45566666 334444 33556778888898777654 3444444 4564 999999999999983
No 45
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=52.42 E-value=14 Score=26.16 Aligned_cols=36 Identities=22% Similarity=0.544 Sum_probs=25.8
Q ss_pred EEEEEecccchhHH------HHHHHHhhccCCceEEEEecCC
Q 029814 123 VVVMRVSLHCQGCA------GKLKKHLSKMEGVTSFSIDLET 158 (187)
Q Consensus 123 tv~f~VGM~C~sCa------~kIekaL~~l~GV~sV~Vdl~s 158 (187)
.+.+.+.+++.+|. ..|+.+|..++||.++++++..
T Consensus 42 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~~ 83 (103)
T 3cq1_A 42 RAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVTF 83 (103)
T ss_dssp EEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEECC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEec
Confidence 45566655666654 5688899999999998887543
No 46
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=49.96 E-value=15 Score=26.35 Aligned_cols=35 Identities=20% Similarity=0.463 Sum_probs=24.0
Q ss_pred EEEEecccchhH------HHHHHHHh-hccCCceEEEEecCC
Q 029814 124 VVMRVSLHCQGC------AGKLKKHL-SKMEGVTSFSIDLET 158 (187)
Q Consensus 124 v~f~VGM~C~sC------a~kIekaL-~~l~GV~sV~Vdl~s 158 (187)
+.+.+.++..+| ...|+.+| ..++|+.++++++..
T Consensus 46 V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~~ 87 (108)
T 3lno_A 46 AVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVVW 87 (108)
T ss_dssp EEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEECC
T ss_pred EEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEEe
Confidence 444554555555 45678888 899999988887643
No 47
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=48.76 E-value=13 Score=26.28 Aligned_cols=34 Identities=21% Similarity=0.483 Sum_probs=22.8
Q ss_pred EEEEecccchhHH------HHHHHHhhccCCceEEEEecC
Q 029814 124 VVMRVSLHCQGCA------GKLKKHLSKMEGVTSFSIDLE 157 (187)
Q Consensus 124 v~f~VGM~C~sCa------~kIekaL~~l~GV~sV~Vdl~ 157 (187)
+.+.+.++..+|. ..|+.+|..++||.++++++.
T Consensus 44 V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l~ 83 (103)
T 1uwd_A 44 VKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELT 83 (103)
T ss_dssp EEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEEC
T ss_pred EEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEEe
Confidence 4455544444443 457888888999998888754
No 48
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=45.74 E-value=60 Score=25.69 Aligned_cols=44 Identities=20% Similarity=0.328 Sum_probs=33.7
Q ss_pred hhHHHHHHHHhhccCCceEEEEecCCC---------------EEEEEec---CCHHHHHHHH
Q 029814 133 QGCAGKLKKHLSKMEGVTSFSIDLETK---------------RVTVMGH---ISPTGVLESI 176 (187)
Q Consensus 133 ~sCa~kIekaL~~l~GV~sV~Vdl~s~---------------kVtV~g~---v~~eeIveaI 176 (187)
++|=+-+|..+.+++||.++.+-+.++ .|.|..+ ++.++|++..
T Consensus 9 gGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F 70 (168)
T 4gwb_A 9 GGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELF 70 (168)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHH
T ss_pred ccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHH
Confidence 567777888999999999999988765 4555543 6788887754
No 49
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=44.63 E-value=51 Score=26.85 Aligned_cols=36 Identities=19% Similarity=0.263 Sum_probs=27.4
Q ss_pred ceeEEEEEecccchhHHHHHHHHhhccCCceEEEEecCCCE
Q 029814 120 VFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKR 160 (187)
Q Consensus 120 ~~~tv~f~VGM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~k 160 (187)
.++++.|. ++|-+-+|..+.+++||.++.+-+..+.
T Consensus 42 ~~~~a~fa-----gGCFWg~E~~F~~l~GV~~t~vGYagG~ 77 (199)
T 1fvg_A 42 GTQMAVFG-----MGCFWGAERKFWTLKGVYSTQVGFAGGY 77 (199)
T ss_dssp TCEEEEEE-----ESSHHHHHHHHHTSTTEEEEEEEEESSS
T ss_pred CceEEEEe-----cCCeeeeHHHHhhCCCeEEEEeeccCCC
Confidence 45666665 5677777888999999999999876654
No 50
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=40.42 E-value=64 Score=26.14 Aligned_cols=28 Identities=18% Similarity=0.330 Sum_probs=22.6
Q ss_pred hhHHHHHHHHhhccCCceEEEEecCCCE
Q 029814 133 QGCAGKLKKHLSKMEGVTSFSIDLETKR 160 (187)
Q Consensus 133 ~sCa~kIekaL~~l~GV~sV~Vdl~s~k 160 (187)
++|=+-++..+.+++||.++.+-+.++.
T Consensus 9 gGCFWg~E~~F~~~~GV~~t~vGYagG~ 36 (193)
T 3bqh_A 9 GGCFWGLEAYFQRIDGVVDAVSGYANGN 36 (193)
T ss_dssp ESCHHHHHHHHHTSTTEEEEEEEEESCS
T ss_pred cCCeeehHHHHhcCCCEEEEEEeccCCc
Confidence 5677777888999999999999876553
No 51
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=39.60 E-value=96 Score=21.95 Aligned_cols=43 Identities=12% Similarity=0.208 Sum_probs=28.4
Q ss_pred HHHHHHHHhhccCCceEEEEecCCCEEEEE-ecCCHHHHHHHHH
Q 029814 135 CAGKLKKHLSKMEGVTSFSIDLETKRVTVM-GHISPTGVLESIS 177 (187)
Q Consensus 135 Ca~kIekaL~~l~GV~sV~Vdl~s~kVtV~-g~v~~eeIveaIe 177 (187)
=...+.+.|.+++|+.-..++-..+++.|. ...+.+++.+.|.
T Consensus 18 ~~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~ 61 (95)
T 2jsx_A 18 RISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIE 61 (95)
T ss_dssp SHHHHHHHHTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHHH
Confidence 367899999999999544456557787776 2344555444443
No 52
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=38.28 E-value=69 Score=27.25 Aligned_cols=36 Identities=17% Similarity=0.216 Sum_probs=27.5
Q ss_pred ceeEEEEEecccchhHHHHHHHHhhccCCceEEEEecCCCE
Q 029814 120 VFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKR 160 (187)
Q Consensus 120 ~~~tv~f~VGM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~k 160 (187)
.++++.|. ++|=+-+|..+.+++||.++.+-+.++.
T Consensus 93 ~~e~a~fA-----gGCFWgvE~~F~~l~GV~~t~vGYaGG~ 128 (261)
T 2j89_A 93 GQQFAQFG-----AGCFWGVELAFQRVPGVTKTEVGYTQGL 128 (261)
T ss_dssp TCEEEEEE-----ESSHHHHHHHHHTSTTEEEEEEEEESSS
T ss_pred CCeEEEEe-----cCCeeeeHHHHhhCCCeEEEEeeecCCC
Confidence 45656555 5677778888999999999999876653
No 53
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=36.18 E-value=84 Score=25.80 Aligned_cols=35 Identities=11% Similarity=0.171 Sum_probs=26.5
Q ss_pred ceeEEEEEecccchhHHHHHHHHhhccCCceEEEEecCCC
Q 029814 120 VFQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETK 159 (187)
Q Consensus 120 ~~~tv~f~VGM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~ 159 (187)
.++++.|. ++|=+-+|..+.+++||.++.+-+..+
T Consensus 41 ~~~~a~fa-----gGCFWg~E~~F~~l~GV~~t~vGYaGG 75 (211)
T 1ff3_A 41 GMEIAIFA-----MGXFWGVERLFWQLPGVYSTAAGYTGG 75 (211)
T ss_dssp TCEEEEEE-----CSSHHHHHHHHHTSTTEEEEEEEEESS
T ss_pred CceEEEEe-----cCCeEEehhhHhcCCCeEEEEeeecCC
Confidence 45555555 567777788899999999999987644
No 54
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=33.92 E-value=80 Score=27.48 Aligned_cols=35 Identities=20% Similarity=0.384 Sum_probs=26.9
Q ss_pred eeEEEEEecccchhHHHHHHHHhhccCCceEEEEecCCCE
Q 029814 121 FQVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETKR 160 (187)
Q Consensus 121 ~~tv~f~VGM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~k 160 (187)
|++++|. ++|=+-++..+.+++||.++.+-+.++.
T Consensus 2 ~~~a~fa-----gGCFWg~E~~F~~l~GV~~t~~GYagG~ 36 (313)
T 3e0m_A 2 MAEIYLA-----GGCFWGLEEYFSRISGVLETSVGYANGQ 36 (313)
T ss_dssp CEEEEEE-----CSCHHHHHHHHTTSTTEEEEEEEEESCS
T ss_pred ccEEEEe-----cCCchhhHHHHhhCCCeEEeecccCCCC
Confidence 4455554 6777888889999999999999887654
No 55
>3s6n_M SurviVal motor neuron protein; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2leh_B
Probab=32.56 E-value=3.6 Score=25.11 Aligned_cols=15 Identities=47% Similarity=0.654 Sum_probs=12.3
Q ss_pred cccceee-eehhhccC
Q 029814 49 DHTRLIK-YSKLIDNS 63 (187)
Q Consensus 49 ~~~~~~~-~~~~~~~~ 63 (187)
|.++||+ |+++|.|-
T Consensus 10 DdtALIKayDKAVaSf 25 (37)
T 3s6n_M 10 DDTALIKAYDKAVASF 25 (37)
T ss_pred hhHHHHHHHHHHHHHH
Confidence 5688998 99999873
No 56
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=31.98 E-value=1.1e+02 Score=24.91 Aligned_cols=50 Identities=20% Similarity=0.266 Sum_probs=35.9
Q ss_pred eEEEEEecccchhHHHHHHHHhhccCCceEEEEecCCC---------------EEEEEec---CCHHHHHHHH
Q 029814 122 QVVVMRVSLHCQGCAGKLKKHLSKMEGVTSFSIDLETK---------------RVTVMGH---ISPTGVLESI 176 (187)
Q Consensus 122 ~tv~f~VGM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~---------------kVtV~g~---v~~eeIveaI 176 (187)
++++|. ++|=+-+|..+.+++||.++.+-+.++ .|.|..+ ++.++|++..
T Consensus 26 ~~a~fa-----gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy~~LL~~F 93 (203)
T 1nwa_A 26 QKAILA-----GGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFF 93 (203)
T ss_dssp EEEEEE-----ESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHH
T ss_pred ceEEEe-----cCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCHHHHHHHH
Confidence 445555 567777788899999999999987654 3445543 6778887754
No 57
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=29.66 E-value=1.3e+02 Score=20.21 Aligned_cols=49 Identities=8% Similarity=0.180 Sum_probs=36.3
Q ss_pred EEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEe--cCCHHHHHHHHHhCCC
Q 029814 124 VVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMG--HISPTGVLESISKVKR 181 (187)
Q Consensus 124 v~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g--~v~~eeIveaIekaGk 181 (187)
.++-+ |+.|+.=.-++.++|.+++. .+.+.|.. ......|....++.|+
T Consensus 11 ~~lD~rGl~CP~Pvl~~kkal~~l~~---------G~~l~V~~dd~~a~~di~~~~~~~G~ 62 (82)
T 3lvj_C 11 HTLDALGLRCPEPVMMVRKTVRNMQP---------GETLLIIADDPATTRDIPGFCTFMEH 62 (82)
T ss_dssp EEEECTTCCTTHHHHHHHHHHHTSCT---------TCEEEEEECCTTHHHHHHHHHHHTTC
T ss_pred EEEECCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHHHCCC
Confidence 56788 99999999999999998742 22344432 2455678888888887
No 58
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=29.57 E-value=1.5e+02 Score=20.89 Aligned_cols=49 Identities=18% Similarity=0.201 Sum_probs=36.8
Q ss_pred EEEEe-cccchhHHHHHHHHhhccCCceEEEEecCCCEEEEEec--CCHHHHHHHHHhCCC
Q 029814 124 VVMRV-SLHCQGCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGH--ISPTGVLESISKVKR 181 (187)
Q Consensus 124 v~f~V-GM~C~sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~--v~~eeIveaIekaGk 181 (187)
.++-+ |+.|+.=.-++.++|.+++. .+.+.|..+ .....|...+++.|+
T Consensus 27 ~~LD~rGl~CP~Pvl~tkkaL~~l~~---------Ge~L~Vl~dd~~a~~dI~~~~~~~G~ 78 (98)
T 1jdq_A 27 KTLDVRGEVCPVPDVETKRALQNMKP---------GEILEVWIDYPMSKERIPETVKKLGH 78 (98)
T ss_dssp EEEECSSCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSCTHHHHHHHHHHHSSC
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHHHCCC
Confidence 46888 99999999999999998742 234444432 456778888888886
No 59
>1owx_A Lupus LA protein, SS-B, LA; RRM, transcription; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.26 E-value=1.6e+02 Score=21.70 Aligned_cols=56 Identities=9% Similarity=0.063 Sum_probs=42.0
Q ss_pred EEEEe-cccch-hHHHHHHHHhhccCCceEEEEecCCCEEEEEecCCHHHHHHHHHhC
Q 029814 124 VVMRV-SLHCQ-GCAGKLKKHLSKMEGVTSFSIDLETKRVTVMGHISPTGVLESISKV 179 (187)
Q Consensus 124 v~f~V-GM~C~-sCa~kIekaL~~l~GV~sV~Vdl~s~kVtV~g~v~~eeIveaIeka 179 (187)
+.+.| |+... .+...|+..+.+...|..+++.....+..|.......+-.+++++.
T Consensus 19 ~il~v~~l~~~~~sredLke~F~~~G~V~~Vd~~~g~~tgfVrf~~~~~~A~~av~~l 76 (121)
T 1owx_A 19 CLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRGAKEGIILFKEKAKEALGKAKDA 76 (121)
T ss_dssp CEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTTCSEEEEEESSCHHHHHHHHHHT
T ss_pred eEEEEecCCCCcCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCChHHHHHHHHHh
Confidence 45778 77777 7899999999998889888888888888887544355555666654
Done!