Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>029818
MEMEREKLINEEIEEERKPITNGSPTNQTPETVKTKVPEVEIHLYRRGEGPIAVFKSSLV
GWDQDQLDVREILDKYGFKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQ
DSMIKPVTKILFGLTVITLLITLLFKDRPEWINKLNVPGWNFPPWVIACVVIVFTRIRKR
TRNFFMK

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029818
        (187 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2013036 - symbol:AT1G71780 "AT1G71780" species...   492  5.4e-47   1


>TAIR|locus:2013036 [details] [associations]
            symbol:AT1G71780 "AT1G71780" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
            [GO:0009744 "response to sucrose stimulus" evidence=RCA]
            [GO:0009749 "response to glucose stimulus" evidence=RCA]
            [GO:0009750 "response to fructose stimulus" evidence=RCA]
            [GO:0009853 "photorespiration" evidence=RCA] GO:GO:0005783
            EMBL:CP002684 IPI:IPI00532429 RefSeq:NP_565024.1 UniGene:At.27925
            PRIDE:F4IA30 EnsemblPlants:AT1G71780.1 GeneID:843508
            KEGG:ath:AT1G71780 OMA:FPPWVLA Uniprot:F4IA30
        Length = 197

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 93/169 (55%), Positives = 121/169 (71%)

Query:    20 ITNGSPTNQTPETVKT-KVPEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGF 78
             + N  P ++   T    KVPEVEIHLY+ G+GPI VFKS+L G++QDQL+VR IL+KYG 
Sbjct:    27 LENSQPESELRSTTAAAKVPEVEIHLYKCGKGPIDVFKSNLGGYEQDQLEVRSILEKYGL 86

Query:    79 KSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMIKPVTKXXXXXXXXX 138
             K+++AF+   GR VPIRF+ RNGRS+L Y+DG+V+Y+DGEPQDS++KP+T+         
Sbjct:    87 KAIFAFNVEKGRAVPIRFHPRNGRSVLPYRDGAVIYIDGEPQDSLLKPITRIILGVVIVT 146

Query:   139 XXXXXXFKDRPEWINKLNVPGWNFPPWVIACVVIVFTRIRKRTRNFFMK 187
                    KD P WI K N+    FPPWV+AC+VIVFTR RKRTR+FF K
Sbjct:   147 LLITFLLKDPPAWI-KNNISIGTFPPWVLACIVIVFTRARKRTRDFFKK 194


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.140   0.443    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      187       154   0.00088  105 3  11 22  0.49    31
                                                     30  0.41    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  582 (62 KB)
  Total size of DFA:  152 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.39u 0.09s 15.48t   Elapsed:  00:00:01
  Total cpu time:  15.39u 0.09s 15.48t   Elapsed:  00:00:01
  Start:  Thu May  9 19:30:57 2013   End:  Thu May  9 19:30:58 2013

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