Query 029818
Match_columns 187
No_of_seqs 20 out of 22
Neff 2.5
Searched_HMMs 29240
Date Mon Mar 25 06:07:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029818.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029818hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kud_A PKNB, serine/threonine- 88.4 0.57 1.9E-05 34.4 4.4 91 18-115 41-135 (140)
2 2kui_A PKNB, serine/threonine- 85.1 2.7 9.4E-05 34.3 7.2 92 18-115 41-135 (275)
3 3ouv_A Serine/threonine protei 84.0 3.5 0.00012 27.0 6.1 54 57-115 11-66 (71)
4 2kue_A PKNB, serine/threonine- 80.3 1.3 4.3E-05 32.5 3.1 71 39-115 62-134 (138)
5 3py9_A Protein kinase; pasta, 77.8 2.8 9.6E-05 34.9 4.8 73 38-115 60-135 (294)
6 3i28_A Epoxide hydrolase 2; ar 76.6 7.7 0.00026 30.9 6.8 49 38-87 246-294 (555)
7 2kuf_A PKNB, serine/threonine- 69.7 6 0.00021 28.7 4.4 71 38-115 60-135 (139)
8 2a2p_A Selenoprotein M, SELM p 68.3 5 0.00017 31.5 3.8 41 36-79 43-92 (129)
9 2kui_A PKNB, serine/threonine- 64.2 11 0.00039 30.6 5.4 69 41-115 132-202 (275)
10 2cjp_A Epoxide hydrolase; HET: 63.8 23 0.00079 26.8 6.7 52 35-87 16-67 (328)
11 1a8s_A Chloroperoxidase F; hal 62.2 34 0.0012 24.8 7.2 49 38-87 7-55 (273)
12 1brt_A Bromoperoxidase A2; hal 60.1 40 0.0014 24.8 7.4 53 36-89 9-62 (277)
13 3qit_A CURM TE, polyketide syn 59.7 42 0.0014 23.4 7.3 52 35-87 9-62 (286)
14 4aay_B AROB; oxidoreductase, r 58.5 12 0.00042 29.4 4.5 60 48-120 72-137 (175)
15 2qvb_A Haloalkane dehalogenase 57.6 19 0.00064 25.8 5.0 52 34-87 12-63 (297)
16 2kuf_A PKNB, serine/threonine- 57.2 31 0.001 24.9 6.2 53 58-115 12-66 (139)
17 3pfb_A Cinnamoyl esterase; alp 56.4 30 0.001 24.8 5.9 60 27-87 19-84 (270)
18 1zoi_A Esterase; alpha/beta hy 56.4 46 0.0016 24.3 7.1 51 38-89 8-61 (276)
19 1a8q_A Bromoperoxidase A1; hal 56.2 50 0.0017 23.9 7.2 49 38-87 7-55 (274)
20 1mj5_A 1,3,4,6-tetrachloro-1,4 55.9 15 0.00051 26.6 4.3 51 35-87 14-64 (302)
21 3id1_A Regulator of sigma E pr 55.6 6.7 0.00023 26.9 2.2 40 39-79 52-91 (95)
22 4e8j_A Lincosamide resistance 55.2 10 0.00035 30.3 3.6 57 63-123 53-119 (161)
23 3u1t_A DMMA haloalkane dehalog 54.4 57 0.0019 23.3 7.3 52 35-87 14-65 (309)
24 1a88_A Chloroperoxidase L; hal 52.3 63 0.0021 23.4 7.1 50 37-87 6-57 (275)
25 3bdi_A Uncharacterized protein 51.8 30 0.001 23.6 5.1 50 37-87 11-65 (207)
26 3fob_A Bromoperoxidase; struct 51.3 45 0.0015 24.7 6.3 51 36-87 13-63 (281)
27 3hss_A Putative bromoperoxidas 50.7 60 0.0021 23.4 6.8 54 33-87 26-80 (293)
28 2qmq_A Protein NDRG2, protein 50.2 35 0.0012 25.0 5.5 58 32-91 13-81 (286)
29 3rm3_A MGLP, thermostable mono 50.0 37 0.0013 24.3 5.6 48 38-87 29-76 (270)
30 3kda_A CFTR inhibitory factor 48.3 40 0.0014 24.3 5.5 51 35-87 15-65 (301)
31 1q0r_A RDMC, aclacinomycin met 47.6 57 0.002 24.3 6.5 52 37-89 8-63 (298)
32 3r40_A Fluoroacetate dehalogen 47.0 68 0.0023 22.9 6.5 53 33-87 16-68 (306)
33 2xt0_A Haloalkane dehalogenase 46.1 49 0.0017 25.3 6.0 54 35-89 24-85 (297)
34 3fsg_A Alpha/beta superfamily 45.9 11 0.00038 26.5 2.1 49 35-87 6-58 (272)
35 3ia2_A Arylesterase; alpha-bet 45.4 83 0.0028 22.7 7.0 51 36-87 5-55 (271)
36 3evi_A Phosducin-like protein 44.3 25 0.00085 25.1 3.8 41 35-78 72-114 (118)
37 1hkh_A Gamma lactamase; hydrol 43.4 88 0.003 22.7 6.8 50 37-87 10-59 (279)
38 2f9z_C Protein (chemotaxis met 42.5 20 0.00067 28.4 3.3 66 38-109 82-149 (159)
39 1ehy_A Protein (soluble epoxid 42.2 80 0.0027 23.7 6.6 53 35-89 14-67 (294)
40 3vdx_A Designed 16NM tetrahedr 41.1 74 0.0025 26.6 6.8 51 36-87 10-60 (456)
41 3r0v_A Alpha/beta hydrolase fo 41.1 90 0.0031 21.8 6.6 50 36-87 9-58 (262)
42 3il0_A Aminopeptidase P; XAA-P 40.1 20 0.0007 24.7 2.8 50 65-119 6-59 (131)
43 2ocg_A Valacyclovir hydrolase; 40.1 33 0.0011 24.7 4.0 51 36-87 8-60 (254)
44 2kue_A PKNB, serine/threonine- 39.9 45 0.0015 24.1 4.7 53 58-115 12-67 (138)
45 1k5j_A Nucleoplasmin core; bet 38.8 20 0.00067 27.8 2.7 17 38-55 98-114 (124)
46 1g2b_A Spectrin alpha chain; c 38.4 17 0.00059 22.8 2.0 33 78-123 24-56 (62)
47 1nlq_A Nucleoplasmin-like prot 37.8 21 0.00073 26.7 2.7 17 38-55 84-100 (108)
48 2drm_A Acanthamoeba myosin IB; 37.7 16 0.00054 22.4 1.7 34 78-124 6-39 (58)
49 1xe0_A Nucleophosmin; drosophi 37.3 22 0.00074 27.1 2.7 17 38-55 88-104 (114)
50 1b6g_A Haloalkane dehalogenase 37.2 83 0.0028 24.2 6.1 49 40-89 34-86 (310)
51 1rh5_C Secbeta; protein transl 36.4 43 0.0015 22.5 3.8 36 108-143 12-47 (53)
52 4f14_A Nebulette; SH3 domain, 36.4 15 0.0005 22.7 1.4 35 77-124 8-42 (64)
53 1uff_A Intersectin 2; beta bar 35.0 24 0.00081 24.1 2.4 34 78-124 8-43 (93)
54 1zx6_A YPR154WP; SH3 domain, p 34.9 18 0.00063 22.2 1.7 34 78-124 5-38 (58)
55 1cka_A C-CRK N-terminal SH3 do 34.7 20 0.00069 21.9 1.9 33 78-123 4-36 (57)
56 3tvt_A Disks large 1 tumor sup 34.6 14 0.00049 30.9 1.5 39 77-123 7-45 (292)
57 1sem_A SEM-5; SRC-homology 3 ( 34.5 19 0.00065 22.0 1.7 33 78-123 5-37 (58)
58 2daj_A KIAA0977 protein, COBL- 34.0 10 0.00035 28.6 0.4 25 64-88 60-84 (91)
59 3kxp_A Alpha-(N-acetylaminomet 33.9 85 0.0029 23.2 5.5 53 33-87 51-103 (314)
60 2ed1_A 130 kDa phosphatidylino 33.9 26 0.00088 22.9 2.4 34 78-124 13-46 (76)
61 1w70_A Neutrophil cytosol fact 33.7 18 0.00061 22.5 1.5 35 77-124 6-40 (60)
62 1yn8_A NBP2, NAP1-binding prot 32.9 15 0.0005 22.5 0.9 34 78-124 4-37 (59)
63 3oos_A Alpha/beta hydrolase fa 32.7 37 0.0013 23.8 3.2 51 35-87 8-58 (278)
64 1tqh_A Carboxylesterase precur 32.4 88 0.003 22.9 5.3 45 44-89 10-55 (247)
65 2qpz_A Naphthalene 1,2-dioxyge 32.3 54 0.0018 22.3 3.9 41 80-121 36-79 (103)
66 2dmo_A Neutrophil cytosol fact 32.3 25 0.00084 22.5 2.0 34 78-124 10-43 (68)
67 1vry_A Glycine receptor alpha- 32.1 26 0.00089 25.0 2.3 12 165-176 38-49 (76)
68 2eyx_A V-CRK sarcoma virus CT1 31.9 20 0.0007 22.9 1.6 35 78-123 9-43 (67)
69 1uti_A GRB2-related adaptor pr 31.8 24 0.00083 21.6 1.9 33 78-123 4-36 (58)
70 2vwf_A Growth factor receptor- 31.7 25 0.00085 21.4 1.9 33 78-123 5-37 (58)
71 1tg0_A BBC1 protein, myosin ta 31.5 19 0.00064 23.0 1.3 33 78-123 10-42 (68)
72 1jo8_A ABP1P, actin binding pr 31.3 25 0.00087 21.6 1.9 33 78-123 3-35 (58)
73 3ibt_A 1H-3-hydroxy-4-oxoquino 31.3 89 0.003 22.1 5.0 50 36-87 5-56 (264)
74 1zlm_A Osteoclast stimulating 31.3 23 0.00079 21.8 1.7 34 78-124 6-39 (58)
75 3py9_A Protein kinase; pasta, 31.2 92 0.0032 25.7 5.8 53 58-115 11-66 (294)
76 4e6r_A Cytoplasmic protein NCK 31.1 21 0.00073 21.6 1.5 33 79-124 5-37 (58)
77 2nwm_A Vinexin; cell adhesion; 31.1 27 0.00092 22.5 2.1 34 78-124 4-37 (65)
78 3t30_B Nucleoplasmin-2; beta-b 31.1 31 0.0011 26.1 2.7 17 38-55 88-104 (110)
79 2ew3_A SH3-containing GRB2-lik 30.7 20 0.00069 23.3 1.4 34 78-124 6-39 (68)
80 2o9s_A Ponsin; SH3 domain, sig 30.5 22 0.00074 22.5 1.5 33 78-123 9-41 (67)
81 3g2b_A Coenzyme PQQ synthesis 30.4 14 0.0005 26.4 0.7 31 86-117 13-43 (95)
82 1uj0_A Signal transducing adap 30.1 27 0.00092 21.8 1.9 34 78-124 8-41 (62)
83 2oaw_A Spectrin alpha chain, b 30.0 27 0.00092 21.6 1.9 34 78-124 4-37 (65)
84 2i0n_A Class VII unconventiona 29.8 18 0.00062 24.0 1.1 34 78-124 13-47 (80)
85 2dl3_A Sorbin and SH3 domain-c 29.5 25 0.00085 22.2 1.7 34 78-124 10-43 (68)
86 2dl7_A KIAA0769 protein; SH3 d 29.2 29 0.00098 22.4 2.0 34 78-124 11-47 (73)
87 2yup_A Vinexin; sorbin and SH3 29.1 35 0.0012 23.0 2.5 34 78-124 20-53 (90)
88 3ulr_B SRC substrate cortactin 28.9 30 0.001 21.5 1.9 34 78-124 12-45 (65)
89 2eqi_A Phospholipase C, gamma 28.8 36 0.0012 21.6 2.4 34 78-124 10-43 (69)
90 1umu_A UMUD'; induced mutagene 28.5 27 0.00093 24.4 1.9 48 57-118 4-53 (116)
91 2vyo_A ECU11_0510, chitooligos 28.5 34 0.0012 27.3 2.6 25 60-84 34-59 (254)
92 1b07_A Protein (proto-oncogene 28.4 27 0.00094 22.4 1.7 34 78-124 6-39 (65)
93 2kgt_A Tyrosine-protein kinase 28.2 15 0.00053 23.5 0.5 32 78-123 13-44 (72)
94 2wwb_C SEC61BETA, protein tran 27.8 46 0.0016 25.0 3.0 34 110-143 54-87 (96)
95 2cc1_A Beta-lactamase, penicil 27.6 1.4E+02 0.0049 22.3 5.9 24 68-91 6-30 (262)
96 2lcs_A NAP1-binding protein 2; 27.6 22 0.00074 23.4 1.1 34 78-124 8-41 (73)
97 2dbm_A SH3-containing GRB2-lik 27.6 32 0.0011 22.2 1.9 34 78-124 10-43 (73)
98 2o2o_A SH3-domain kinase-bindi 27.6 36 0.0012 23.7 2.4 35 78-125 21-55 (92)
99 2kud_A PKNB, serine/threonine- 27.6 45 0.0016 24.1 3.0 53 58-115 13-67 (140)
100 2d8j_A FYN-related kinase; SH3 27.4 24 0.00082 22.7 1.3 34 78-124 10-43 (77)
101 3h0h_A Proto-oncogene tyrosine 27.2 28 0.00096 22.2 1.6 34 78-124 18-51 (73)
102 4glm_A Dynamin-binding protein 26.9 25 0.00087 22.2 1.3 34 78-124 16-49 (72)
103 2gnc_A SLIT-ROBO RHO GTPase-ac 26.7 21 0.00071 22.2 0.9 33 78-123 9-41 (60)
104 1g8f_A Sulfate adenylyltransfe 26.5 39 0.0013 30.6 3.0 41 49-89 155-199 (511)
105 2lj0_A Sorbin and SH3 domain-c 26.1 27 0.00093 23.0 1.4 35 77-124 8-42 (65)
106 1y0m_A 1-phosphatidylinositol- 25.9 36 0.0012 21.1 1.9 34 78-124 6-39 (61)
107 3dkr_A Esterase D; alpha beta 25.9 1.6E+02 0.0056 20.1 5.7 42 45-87 17-58 (251)
108 2hi2_A Fimbrial protein; type 25.8 39 0.0013 24.9 2.4 27 130-156 6-32 (158)
109 2ebp_A SAM and SH3 domain-cont 25.8 43 0.0015 21.9 2.4 36 78-124 12-47 (73)
110 2j6f_A CD2-associated protein; 25.7 31 0.001 21.5 1.6 33 78-123 4-37 (62)
111 4f0j_A Probable hydrolytic enz 25.7 1.8E+02 0.0063 20.7 6.4 52 35-87 27-82 (315)
112 2dlp_A KIAA1783 protein; SH3 d 25.6 45 0.0015 22.2 2.5 28 78-118 11-38 (85)
113 2xmf_A Myosin 1E SH3; motor pr 25.6 28 0.00097 21.5 1.4 33 78-123 8-40 (60)
114 1tht_A Thioesterase; 2.10A {Vi 25.5 1.8E+02 0.0062 22.8 6.3 49 38-87 16-71 (305)
115 3u23_A CD2-associated protein; 25.5 22 0.00074 22.0 0.8 34 78-124 10-43 (65)
116 1mtz_A Proline iminopeptidase; 25.1 1.1E+02 0.0036 22.4 4.6 51 35-87 10-64 (293)
117 1x2q_A Signal transducing adap 25.0 35 0.0012 22.9 1.8 34 78-124 20-53 (88)
118 1k4u_S Phagocyte NADPH oxidase 25.0 30 0.001 21.5 1.4 34 78-124 8-41 (62)
119 3qyj_A ALR0039 protein; alpha/ 24.9 1.6E+02 0.0053 22.4 5.7 51 35-87 10-60 (291)
120 3c0c_A Endophilin-A2; endocyto 24.8 29 0.00099 22.4 1.3 33 78-123 16-48 (73)
121 2e3j_A Epoxide hydrolase EPHB; 24.7 2.1E+02 0.0072 22.1 6.5 51 36-87 9-63 (356)
122 1j1i_A META cleavage compound 24.6 1.1E+02 0.0038 22.9 4.8 51 35-87 21-74 (296)
123 3thk_A Spectrin alpha chain, b 24.4 37 0.0013 21.6 1.8 34 78-124 8-41 (73)
124 1x2k_A OSTF1, osteoclast stimu 24.4 33 0.0011 21.8 1.6 34 78-124 10-43 (68)
125 3bwx_A Alpha/beta hydrolase; Y 24.2 1.7E+02 0.006 21.3 5.7 50 36-87 12-64 (285)
126 3g9x_A Haloalkane dehalogenase 24.1 1.6E+02 0.0055 20.9 5.3 52 34-87 14-67 (299)
127 1oqw_A Fimbrial protein; type 24.0 33 0.0011 25.1 1.7 27 130-156 6-32 (144)
128 3zzx_A Thioredoxin; oxidoreduc 24.0 67 0.0023 21.9 3.2 33 36-77 73-105 (105)
129 2puj_A 2-hydroxy-6-OXO-6-pheny 24.0 1E+02 0.0035 23.0 4.4 46 40-87 23-72 (286)
130 1qme_A Penicillin-binding prot 23.9 1.9E+02 0.0065 26.4 6.9 64 38-115 634-698 (702)
131 2cud_A SRC-like-adapter; SH3 d 23.9 33 0.0011 22.7 1.5 27 78-117 20-46 (79)
132 2fei_A CD2-associated protein; 23.8 42 0.0014 21.6 2.0 34 78-124 4-37 (65)
133 2dl4_A Protein STAC; SH3 domai 23.8 35 0.0012 21.7 1.6 34 78-124 10-43 (68)
134 1x6v_B Bifunctional 3'-phospho 23.5 49 0.0017 31.0 3.1 52 36-88 362-422 (630)
135 2bz8_A SH3-domain kinase bindi 23.5 41 0.0014 20.6 1.8 33 78-123 4-36 (58)
136 1neg_A Spectrin alpha chain, b 23.5 39 0.0013 23.1 1.9 35 78-125 20-54 (83)
137 2gqi_A RAS GTPase-activating p 23.4 18 0.00062 23.3 0.1 35 77-124 9-44 (71)
138 2cc0_A Acetyl-xylan esterase; 23.3 44 0.0015 25.2 2.3 26 61-86 14-39 (195)
139 2a28_A BZZ1 protein; SH3 domai 23.2 39 0.0013 20.4 1.6 33 78-123 3-36 (54)
140 2p74_A Beta-lactamase CTX-M-9A 23.1 57 0.0019 24.7 2.9 30 68-99 8-38 (263)
141 2wtm_A EST1E; hydrolase; 1.60A 23.0 2.1E+02 0.0073 20.6 5.9 39 48-87 25-65 (251)
142 1nm7_A Peroxisomal membrane pr 22.9 68 0.0023 21.3 2.9 32 76-119 8-39 (69)
143 3o74_A Fructose transport syst 22.8 32 0.0011 25.4 1.4 74 68-145 169-250 (272)
144 3ngp_A Spectrin alpha chain, b 22.7 42 0.0014 20.5 1.7 34 78-124 9-42 (62)
145 2g6f_X RHO guanine nucleotide 22.7 33 0.0011 21.1 1.3 33 78-123 7-39 (59)
146 1bb9_A Amphiphysin 2; transfer 22.6 40 0.0014 24.4 1.9 35 78-125 47-86 (115)
147 1oot_A Hypothetical 40.4 kDa p 22.6 44 0.0015 20.5 1.8 29 78-119 6-34 (60)
148 2dbk_A CRK-like protein; struc 22.4 42 0.0014 22.6 1.8 35 78-123 19-53 (88)
149 2fpf_A C-JUN-amino-terminal ki 22.3 34 0.0012 21.9 1.3 35 77-124 8-42 (71)
150 3dqz_A Alpha-hydroxynitrIle ly 22.2 1.9E+02 0.0063 20.2 5.2 38 49-87 3-40 (258)
151 3eg3_A Proto-oncogene tyrosine 22.1 44 0.0015 20.5 1.8 27 78-117 8-34 (63)
152 1gl5_A Tyrosine-protein kinase 22.0 49 0.0017 20.9 2.0 34 78-124 5-38 (67)
153 2ke9_A Caskin-2; SH3 domain, A 22.0 69 0.0024 21.6 2.9 34 78-124 21-55 (83)
154 2ydl_A SH3 domain-containing k 21.8 43 0.0015 21.8 1.7 34 78-124 5-40 (69)
155 1s1n_A Nephrocystin 1; beta ba 21.8 60 0.0021 20.4 2.4 34 78-124 13-46 (68)
156 2gks_A Bifunctional SAT/APS ki 21.8 62 0.0021 29.1 3.3 51 37-88 115-173 (546)
157 1z9q_A Neutrophil cytosol fact 21.6 19 0.00064 24.6 -0.1 34 78-124 21-54 (79)
158 1i07_A Epidermal growth factor 21.6 47 0.0016 20.4 1.8 32 78-123 4-35 (60)
159 1x2p_A Protein arginine N-meth 21.6 42 0.0014 21.2 1.6 34 78-124 10-43 (68)
160 2ak5_A RHO guanine nucleotide 21.6 45 0.0015 20.7 1.7 33 78-123 9-41 (64)
161 1zuu_A BZZ1 protein; SH3 domai 21.6 43 0.0015 20.3 1.6 33 78-123 4-37 (58)
162 2yuo_A CIP85, RUN and TBC1 dom 21.6 44 0.0015 21.8 1.7 33 78-123 10-42 (78)
163 3dqy_A Toluene 1,2-dioxygenase 21.5 1.1E+02 0.0036 20.9 3.8 53 48-121 22-77 (106)
164 2d8h_A SH3YL1 protein; SH3 dom 21.4 37 0.0013 22.2 1.3 29 78-119 20-48 (80)
165 2j05_A RAS GTPase-activating p 21.3 35 0.0012 21.4 1.2 34 78-124 8-42 (65)
166 2pqh_A Spectrin alpha chain, b 21.3 48 0.0017 21.8 1.9 34 78-124 5-38 (80)
167 1ujy_A RHO guanine nucleotide 20.9 52 0.0018 21.3 2.0 34 78-124 13-46 (76)
168 1yn9_A BVP, polynucleotide 5'- 20.8 84 0.0029 22.7 3.3 36 52-87 22-65 (169)
169 2m0y_A Dedicator of cytokinesi 20.8 47 0.0016 21.1 1.7 33 78-124 14-46 (74)
170 3llc_A Putative hydrolase; str 20.8 2.2E+02 0.0075 19.8 6.5 49 38-87 21-75 (270)
171 1w1f_A Tyrosine-protein kinase 20.8 37 0.0013 21.1 1.2 32 78-123 10-41 (65)
172 4esr_A Jouberin; AHI-1, AHI1, 20.6 40 0.0014 21.3 1.3 33 78-123 9-41 (69)
173 1j3t_A Intersectin 2; beta bar 20.3 53 0.0018 21.2 1.9 28 78-118 13-40 (74)
174 3cqt_A P59-FYN, proto-oncogene 20.3 48 0.0016 22.1 1.7 34 78-124 8-41 (79)
175 3sok_A Fimbrial protein; pilus 20.3 43 0.0015 24.9 1.7 27 130-156 6-32 (151)
176 1x6g_A Megakaryocyte-associate 20.2 44 0.0015 22.2 1.5 33 78-123 20-53 (81)
177 2dm1_A Protein VAV-2; RHO fami 20.1 60 0.0021 20.9 2.2 29 78-119 10-38 (73)
178 1v47_A ATP sulfurylase; produc 20.1 75 0.0026 27.5 3.4 51 36-87 109-164 (349)
No 1
>2kud_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=88.39 E-value=0.57 Score=34.38 Aligned_cols=91 Identities=16% Similarity=0.136 Sum_probs=58.9
Q ss_pred CCCCCCCCCCCCCccccccCCeEEEEEEE-ecCCceeEeecCcCCcccchhhHHHHHHHhCceEE-EeeeCCCcc--ccc
Q 029818 18 KPITNGSPTNQTPETVKTKVPEVEIHLYR-RGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSV-YAFSTGVGR--GVP 93 (187)
Q Consensus 18 ~~~~~~~~~s~~~~~~~~~~peVEV~Lyr-rGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKal-fAf~p~~gR--Gv~ 93 (187)
...+.|.--+|.|..-..-.+.-+|.|+. .|..++.| =++.|++.+ |.+.+|++.||+.- +.|+..... |.=
T Consensus 41 ~~~~~g~Vi~q~P~~G~~v~~g~~V~l~vS~G~~~v~v--Pd~~G~~~~--~A~~~L~~~Gl~~~~~~~~~~~~~~~G~V 116 (140)
T 2kud_A 41 STIPPDHVIGTDPAANTSVSAGDEITVNVSTGPEQREI--PDVSTLTYA--EAVKKLTAAGFGRFKQANSPSTPELVGKV 116 (140)
T ss_dssp SSCCCSBCSCCCHHHHSCEETTCEEEEEEEEEECEEEC--CTTGGGCHH--HHHHHHHHTTCCCEEEEEECCCGGGTTSE
T ss_pred CCCCCCEEEEEcCCCCCCcCCCCEEEEEEeCCCCcccC--CccCCCCHH--HHHHHHHHCCCceeeeEeCCCCCCcCCEE
Confidence 44455555555543221222456777777 45333433 378898888 68899999999864 556666566 999
Q ss_pred eeecCCCCcccccccCCcEEEe
Q 029818 94 IRFNRRNGRSMLGYKDGSVVYM 115 (187)
Q Consensus 94 irfnPrnG~SlL~Y~dgsvI~l 115 (187)
|.-+|..|-.+ ..|+.|.|
T Consensus 117 i~q~p~~G~~v---~~g~~V~l 135 (140)
T 2kud_A 117 IGTNPPANQTS---AITNVVII 135 (140)
T ss_dssp EEESSCTTSEE---ETTSCEEE
T ss_pred EEEcCCCCCCc---CCCCEEEE
Confidence 99999998765 34666543
No 2
>2kui_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=85.11 E-value=2.7 Score=34.28 Aligned_cols=92 Identities=17% Similarity=0.125 Sum_probs=59.5
Q ss_pred CCCCCCCCCCCCCccccccCCeEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCceEE-EeeeCCCcc--ccce
Q 029818 18 KPITNGSPTNQTPETVKTKVPEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSV-YAFSTGVGR--GVPI 94 (187)
Q Consensus 18 ~~~~~~~~~s~~~~~~~~~~peVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKal-fAf~p~~gR--Gv~i 94 (187)
...+.|.--+|.|..-..-.+.-+|.|+.- +||-.+-==++.|++.+ |.+.+|++.||+.. ..|+..... |.-|
T Consensus 41 ~~~~~g~Vi~q~P~~G~~v~~g~~V~l~vs-~G~~~v~vPdv~G~s~~--~A~~~L~~~Gl~~~~~~~s~~~~~~~G~Vi 117 (275)
T 2kui_A 41 STIPPDHVIGTDPAANTSVSAGDEITVNVS-TGPEQREIPDVSTLTYA--EAVKKLTAAGFGRFKQANSPSTPELVGKVI 117 (275)
T ss_dssp SSSSCSSCSCCCTTTTSEECSSCEEEEEEE-ESCCEEECCCCCTTCHH--HHHHHHHHTSCCCEEEEEECCCTTTBTSEE
T ss_pred CCCCCCEEEEecCCCCCCcCCCCEEEEEEe-cCCcccccCccCCCCHH--HHHHHHHHCCCeecceEeCCCCCCcCCEEE
Confidence 334445555554433222235667777775 45533222358898877 58899999999844 567777667 9999
Q ss_pred eecCCCCcccccccCCcEEEe
Q 029818 95 RFNRRNGRSMLGYKDGSVVYM 115 (187)
Q Consensus 95 rfnPrnG~SlL~Y~dgsvI~l 115 (187)
.-+|..|-.+ ..|+.|.|
T Consensus 118 ~q~P~~G~~v---~~g~~V~l 135 (275)
T 2kui_A 118 GTNPPANQTS---AITNVVII 135 (275)
T ss_dssp EESSCSSSEE---ETTCCEEE
T ss_pred EEcCCCCCCC---CCCCEEEE
Confidence 9999999765 34555544
No 3
>3ouv_A Serine/threonine protein kinase; protein-ligand interaction, transferase; 2.00A {Mycobacterium tuberculosis H37RA}
Probab=83.96 E-value=3.5 Score=26.98 Aligned_cols=54 Identities=19% Similarity=0.266 Sum_probs=40.6
Q ss_pred cCcCCcccchhhHHHHHHHhCceEE--EeeeCCCccccceeecCCCCcccccccCCcEEEe
Q 029818 57 SSLVGWDQDQLDVREILDKYGFKSV--YAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYM 115 (187)
Q Consensus 57 s~LgG~eqDqLev~~Il~k~gLKal--fAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~l 115 (187)
=++.|.+.+ |.+.+|++.||+.. ..|+.....|.=|.-+|..|-.+ ..|+.|.|
T Consensus 11 Pdv~G~~~~--~A~~~L~~~Gl~~~~~~~~~~~~~~G~Vi~q~P~~G~~v---~~g~~V~l 66 (71)
T 3ouv_A 11 PDVAGQTVD--VAQKNMNVYGFTKFSQASVDSPRPAGEVTGTNPPAGTTV---PVDSVIEL 66 (71)
T ss_dssp CCCTTCBHH--HHHHHHHHTTCCCEEEEEECCSSCTTBEEEEESCTTCEE---ETTSCEEE
T ss_pred CCcCCCCHH--HHHHHHHHCCCeEEEEEEeCCCCCCCEEEEeeCCCCCCc---CCCCEEEE
Confidence 367787766 47899999999753 45676667898899999999765 35666654
No 4
>2kue_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=80.31 E-value=1.3 Score=32.54 Aligned_cols=71 Identities=18% Similarity=0.217 Sum_probs=48.0
Q ss_pred eEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCceEE--EeeeCCCccccceeecCCCCcccccccCCcEEEe
Q 029818 39 EVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSV--YAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYM 115 (187)
Q Consensus 39 eVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKal--fAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~l 115 (187)
.-+|.|+.- +||-.+-==++-|++.+ |.+.+|++.||+.- +.|+.....|.-|.-+|..|-.+ ..|+.|.|
T Consensus 62 g~~V~l~vS-~G~~~v~vPd~~G~~~~--~A~~~L~~~Gl~~~~~~~~~~~~~~G~Vi~q~p~~G~~v---~~g~~V~l 134 (138)
T 2kue_A 62 TNVVIIIVG-SGPATKDIPDVAGQTVD--VAQKNLNVYGFTKFSQASVDSPRPAGEVTGTNPPAGTTV---PVDSVIEL 134 (138)
T ss_dssp TSCEEEEEE-ECCCEEECCCCTTSBHH--HHHHHHHHHSCSCEEEEEECCSSCCSBEEEESSCTTCEE---ETTSCEEE
T ss_pred CCEEEEEEE-CCccceeCCccCCCCHH--HHHHHHHHCCCeeeEEEecCCCCCCCEEEEEcCCCCCCc---CCCCEEEE
Confidence 344566642 44432222368899877 58999999999864 44666666899999999988765 34666543
No 5
>3py9_A Protein kinase; pasta, muropeptide binding, phosphorylation, membran transferase; 2.20A {Staphylococcus aureus subsp} PDB: 3m9g_A
Probab=77.77 E-value=2.8 Score=34.89 Aligned_cols=73 Identities=12% Similarity=0.200 Sum_probs=51.2
Q ss_pred CeEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCceE---EEeeeCCCccccceeecCCCCcccccccCCcEEE
Q 029818 38 PEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKS---VYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVY 114 (187)
Q Consensus 38 peVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKa---lfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~ 114 (187)
+.-.|.|+.- +||-.+-==++-|++.+ |.+.+|++.||+- -+.||...+.|.=|.-+|..|-.+-+ .|+.|.
T Consensus 60 ~g~~V~l~vS-~G~~~v~VPdv~G~s~~--eA~~~L~~~Gl~v~~~~~~~s~~~~~G~Vi~Q~P~~G~~v~~--~gs~V~ 134 (294)
T 3py9_A 60 RGDSVDVVIS-KGPEKVKMPNVIGLPKE--EALQKLKSLGLKDVTIEKVYNNQAPKGYIANQSVTANTEIAI--HDSNIK 134 (294)
T ss_dssp TTCEEEEEEE-CCSCEEECCCCTTSBHH--HHHHHHHTTTCCCEEEEEECCSSSCTTBEEEESSCC-CEEES--SSCCEE
T ss_pred CCCEEEEEEc-CCCceeECCCCCCCCHH--HHHHHHHHCCCeEEEEEEEECCCCCCCEEEEEcCCCCCEEec--CCCEEE
Confidence 5567777773 56643323478998877 5789999999983 36677777889999999999976632 356554
Q ss_pred e
Q 029818 115 M 115 (187)
Q Consensus 115 l 115 (187)
|
T Consensus 135 l 135 (294)
T 3py9_A 135 L 135 (294)
T ss_dssp E
T ss_pred E
Confidence 4
No 6
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=76.61 E-value=7.7 Score=30.95 Aligned_cols=49 Identities=20% Similarity=0.272 Sum_probs=40.2
Q ss_pred CeEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 38 PEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 38 peVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
.++.++.+..|.||.-||=-.++|....-..+-.-|.++|+. ++++|..
T Consensus 246 dg~~l~~~~~g~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~-v~~~D~~ 294 (555)
T 3i28_A 246 PRVRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYR-VLAMDMK 294 (555)
T ss_dssp TTEEEEEEEECSSSEEEEECCTTCCGGGGTTHHHHHHHTTCE-EEEECCT
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCCchhHHHHHHHHHHhCCCE-EEEecCC
Confidence 689999999999999999888887766656677778888875 7788875
No 7
>2kuf_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=69.74 E-value=6 Score=28.71 Aligned_cols=71 Identities=15% Similarity=0.179 Sum_probs=47.6
Q ss_pred CeEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCceEE--Eeee---CCCccccceeecCCCCcccccccCCcE
Q 029818 38 PEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSV--YAFS---TGVGRGVPIRFNRRNGRSMLGYKDGSV 112 (187)
Q Consensus 38 peVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKal--fAf~---p~~gRGv~irfnPrnG~SlL~Y~dgsv 112 (187)
+.-.|.|+.- +||- +-==++-|++.+ |.+.+|++.||+.- ..|+ .....|.=|.-+|..|-.+ ..|+.
T Consensus 60 ~g~~V~l~vs-~g~~-v~vPdv~G~~~~--~A~~~L~~~Gl~v~~~~~~~~~~~~~~~G~Vi~q~p~~G~~v---~~g~~ 132 (139)
T 2kuf_A 60 VDSVIELQVS-KGNQ-FVMPDLSGMFWV--DAEPRLRALGWTGMLDKGADVDAGGSQHNRVVYQNPPAGTGV---NRDGI 132 (139)
T ss_dssp TTSEEEEEEE-ECSE-EECCCCCSCCHH--HHHHHHHHHTCCSCEEEEEEESCCGGGCCCEEEESSCTTSEE---ETTCC
T ss_pred CCCEEEEEEe-CCCc-ccCCccCCCCHH--HHHHHHHHcCCceeeEEeecccCCCCCCCEEEEEcCCCCCCC---CCCCE
Confidence 3456777762 4453 222368999877 58899999999853 3443 3345788899999988765 34666
Q ss_pred EEe
Q 029818 113 VYM 115 (187)
Q Consensus 113 I~l 115 (187)
|.|
T Consensus 133 V~l 135 (139)
T 2kuf_A 133 ITL 135 (139)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 8
>2a2p_A Selenoprotein M, SELM protein; redox enzyme, oxidoreductase; NMR {Mus musculus} SCOP: c.47.1.23
Probab=68.31 E-value=5 Score=31.49 Aligned_cols=41 Identities=17% Similarity=0.303 Sum_probs=33.8
Q ss_pred cCCeEEEEEEEecCCceeEee---------cCcCCcccchhhHHHHHHHhCce
Q 029818 36 KVPEVEIHLYRRGEGPIAVFK---------SSLVGWDQDQLDVREILDKYGFK 79 (187)
Q Consensus 36 ~~peVEV~LyrrGkGPvavFK---------s~LgG~eqDqLev~~Il~k~gLK 79 (187)
..|.|+|. |.+|.=|.-|+- -++.+|+.|. |+++|+++||-
T Consensus 43 ~y~~v~Vk-yi~Ga~P~LvL~D~~G~e~E~I~Iekw~~d~--I~efL~e~GF~ 92 (129)
T 2a2p_A 43 LYHNLVMK-HLPGADPELVLLSRNYQELERIPLSQMTRDE--INALVQELGFY 92 (129)
T ss_dssp HBTTEEEE-EESSCCCEEEEECSSSCCCEEEECSSSCHHH--HHHHHHHHTCC
T ss_pred hcCceeEE-EeCCCCCEEEEecCCCCEEEEeecccCCHHH--HHHHHHHcCCc
Confidence 47888886 999999998883 4577887775 78999999984
No 9
>2kui_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=64.24 E-value=11 Score=30.57 Aligned_cols=69 Identities=20% Similarity=0.271 Sum_probs=48.3
Q ss_pred EEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCceEE--EeeeCCCccccceeecCCCCcccccccCCcEEEe
Q 029818 41 EIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSV--YAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYM 115 (187)
Q Consensus 41 EV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKal--fAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~l 115 (187)
.|.|+. .+||--+-==++-|++.| |.+.+|++.||+.- +.|+.....|.=|.-+|..|-.+ ..|+.|.|
T Consensus 132 ~V~l~v-S~G~~~v~vPdv~G~~~~--~A~~~L~~~Gl~v~~~~~~~~~~~~G~Vi~q~p~~G~~v---~~g~~V~l 202 (275)
T 2kui_A 132 VVIIIV-GSGPATKDIPDVAGQTVD--VAQKNLNVYGFTKFSQASVDSPRPAGEVTGTNPPAGTTV---PVDSVIEL 202 (275)
T ss_dssp CEEEEE-ECCCCEEECCCCCSSBHH--HHHHHHHHTTCCEEEEEEEECSSCTTBEEEESSCTTCEE---ETTSEEEE
T ss_pred EEEEEE-eCCCccccCCccCCCcHH--HHHHHHHHCCCeEeEeEecCCCCCCCEEEEecCCCCCCc---CCCCEEEE
Confidence 444553 366643333478998877 57899999999864 35666667899999999998765 34665544
No 10
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*
Probab=63.78 E-value=23 Score=26.78 Aligned_cols=52 Identities=21% Similarity=0.243 Sum_probs=37.7
Q ss_pred ccCCeEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 35 TKVPEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 35 ~~~peVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
....+++++.+..|.||.-||=-.++|....=-.+-.-|.+.|++ ++|+|..
T Consensus 16 ~~~~g~~l~y~~~G~g~~vvllHG~~~~~~~w~~~~~~L~~~g~~-via~Dl~ 67 (328)
T 2cjp_A 16 VAVNGLNMHLAELGEGPTILFIHGFPELWYSWRHQMVYLAERGYR-AVAPDLR 67 (328)
T ss_dssp EEETTEEEEEEEECSSSEEEEECCTTCCGGGGHHHHHHHHTTTCE-EEEECCT
T ss_pred ecCCCcEEEEEEcCCCCEEEEECCCCCchHHHHHHHHHHHHCCcE-EEEECCC
Confidence 445788999999999999899777776554434455566666764 6799865
No 11
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=62.22 E-value=34 Score=24.79 Aligned_cols=49 Identities=18% Similarity=0.115 Sum_probs=35.1
Q ss_pred CeEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 38 PEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 38 peVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
..++++....|.||.-||=-.+++....--.+-.-|.++|+ .+++||..
T Consensus 7 ~g~~l~y~~~g~~~~vvllHG~~~~~~~~~~~~~~L~~~g~-~vi~~D~~ 55 (273)
T 1a8s_A 7 DGTQIYYKDWGSGQPIVFSHGWPLNADSWESQMIFLAAQGY-RVIAHDRR 55 (273)
T ss_dssp TSCEEEEEEESCSSEEEEECCTTCCGGGGHHHHHHHHHTTC-EEEEECCT
T ss_pred CCcEEEEEEcCCCCEEEEECCCCCcHHHHhhHHhhHhhCCc-EEEEECCC
Confidence 45678877889999888877776655554455566777776 56788875
No 12
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=60.14 E-value=40 Score=24.83 Aligned_cols=53 Identities=13% Similarity=0.179 Sum_probs=38.4
Q ss_pred cCCeEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC-Cc
Q 029818 36 KVPEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG-VG 89 (187)
Q Consensus 36 ~~peVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~-~g 89 (187)
...+++++.+..|.||--||=-.+++....--.+-+-|.++|+ .++|||.. +|
T Consensus 9 ~~~g~~l~y~~~g~g~pvvllHG~~~~~~~~~~~~~~L~~~g~-~vi~~D~~G~G 62 (277)
T 1brt_A 9 NSTSIDLYYEDHGTGQPVVLIHGFPLSGHSWERQSAALLDAGY-RVITYDRRGFG 62 (277)
T ss_dssp TTEEEEEEEEEECSSSEEEEECCTTCCGGGGHHHHHHHHHTTC-EEEEECCTTST
T ss_pred cCCCcEEEEEEcCCCCeEEEECCCCCcHHHHHHHHHHHhhCCC-EEEEeCCCCCC
Confidence 3467889988889998878876777655554455667778787 46799976 44
No 13
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=59.67 E-value=42 Score=23.44 Aligned_cols=52 Identities=19% Similarity=0.170 Sum_probs=41.0
Q ss_pred ccCCeEEEEEEEec--CCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 35 TKVPEVEIHLYRRG--EGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 35 ~~~peVEV~LyrrG--kGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
.....++++.+..| .+|.-||=-.++|....--.+-.-|.++|+. +++||..
T Consensus 9 ~~~~g~~l~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~-v~~~d~~ 62 (286)
T 3qit_A 9 LEFGGNQICLCSWGSPEHPVVLCIHGILEQGLAWQEVALPLAAQGYR-VVAPDLF 62 (286)
T ss_dssp EEETTEEEEEEEESCTTSCEEEEECCTTCCGGGGHHHHHHHHHTTCE-EEEECCT
T ss_pred eecCCceEEEeecCCCCCCEEEEECCCCcccchHHHHHHHhhhcCeE-EEEECCC
Confidence 44677888888887 7899999998888877766777788888875 6788864
No 14
>4aay_B AROB; oxidoreductase, rieske, iron sulfur, molybdopterin; HET: MGD; 2.70A {Rhizobium species}
Probab=58.46 E-value=12 Score=29.40 Aligned_cols=60 Identities=20% Similarity=0.165 Sum_probs=43.9
Q ss_pred cCC-ceeEeec--CcCCcccchhhHHHHHHHhCceEEEeeeCC-CccccceeecCCCCcccccccCCcEEEeC--CCcC
Q 029818 48 GEG-PIAVFKS--SLVGWDQDQLDVREILDKYGFKSVYAFSTG-VGRGVPIRFNRRNGRSMLGYKDGSVVYMD--GEPQ 120 (187)
Q Consensus 48 GkG-PvavFKs--~LgG~eqDqLev~~Il~k~gLKalfAf~p~-~gRGv~irfnPrnG~SlL~Y~dgsvI~lD--GEPK 120 (187)
|.| |+.+||. ++.+|..+. ..+|||+.. .-+|.++.++..++.=.-||- |+..-+| |+..
T Consensus 72 ~~~~pv~v~R~g~~~~~~r~~~------------G~v~A~~n~CpH~G~~L~~g~~~~~i~CP~H-g~~Fd~~~tG~~~ 137 (175)
T 4aay_B 72 DEDAAGVLLKLGTRVEGGVGPD------------GDIVGFSTICPHKGFPLSYSADNKTFNCPGH-FSVFDPEKGGQQV 137 (175)
T ss_dssp STTSEEEEEECSSCCTTCBTTT------------TCEEEEECBCTTTCCBCEEETTTTEEECTTT-CCEEEGGGTTEEE
T ss_pred CCCCEEEEEEcccccccccCCC------------CEEEEEeCCCCCCCCCCccCCCCCEEEcCCC-CCEECCCCCceEe
Confidence 444 8999986 566665543 469999999 559999999965555555665 8888886 8755
No 15
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Probab=57.57 E-value=19 Score=25.85 Aligned_cols=52 Identities=12% Similarity=0.023 Sum_probs=37.4
Q ss_pred cccCCeEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 34 KTKVPEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 34 ~~~~peVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
..+...+.++.+..|.||.-||=-.++|....--.+-.-|.+. . .+++||..
T Consensus 12 ~~~~~g~~l~~~~~g~~~~vv~lHG~~~~~~~~~~~~~~l~~~-~-~vi~~D~~ 63 (297)
T 2qvb_A 12 YLEIAGKRMAYIDEGKGDAIVFQHGNPTSSYLWRNIMPHLEGL-G-RLVACDLI 63 (297)
T ss_dssp EEEETTEEEEEEEESSSSEEEEECCTTCCGGGGTTTGGGGTTS-S-EEEEECCT
T ss_pred EEEECCEEEEEEecCCCCeEEEECCCCchHHHHHHHHHHHhhc-C-eEEEEcCC
Confidence 3456789999999999999999888887554433333445444 2 78899865
No 16
>2kuf_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=57.16 E-value=31 Score=24.88 Aligned_cols=53 Identities=21% Similarity=0.266 Sum_probs=40.1
Q ss_pred CcCCcccchhhHHHHHHHhCceEE--EeeeCCCccccceeecCCCCcccccccCCcEEEe
Q 029818 58 SLVGWDQDQLDVREILDKYGFKSV--YAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYM 115 (187)
Q Consensus 58 ~LgG~eqDqLev~~Il~k~gLKal--fAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~l 115 (187)
++.|.+.+ |.+.+|++.||+.- +.|+.....|.-|.-+|..|..+- .|+.|.|
T Consensus 12 dv~G~~~~--~A~~~L~~~gl~~~~~~~~~~~~~~g~Vi~q~P~~G~~v~---~g~~V~l 66 (139)
T 2kuf_A 12 DVAGQTVD--VAQKNLNVYGFTKFSQASVDSPRPAGEVTGTNPPAGTTVP---VDSVIEL 66 (139)
T ss_dssp CCCSSBHH--HHHHHHHHHHCCEEEEEEEECSSCTTEEEEESSCTTEEEE---TTSEEEE
T ss_pred CcCCCCHH--HHHHHHHHCCCeEeeEEeeCCCCCCCEEEEEcCCCCCCcc---CCCEEEE
Confidence 56776655 68899999999853 457777778999999999998753 4666544
No 17
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=56.40 E-value=30 Score=24.77 Aligned_cols=60 Identities=10% Similarity=0.003 Sum_probs=40.6
Q ss_pred CCCCccccccCCeEEEEEEEec----CCceeEeecCcCCc--ccchhhHHHHHHHhCceEEEeeeCC
Q 029818 27 NQTPETVKTKVPEVEIHLYRRG----EGPIAVFKSSLVGW--DQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 27 s~~~~~~~~~~peVEV~LyrrG----kGPvavFKs~LgG~--eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
+|..++......+.+++.+.-+ .+|+-||=-.++|. ...--.+.+.|.++|+. ++++|..
T Consensus 19 ~~~~~~~~~~~~g~~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~-v~~~d~~ 84 (270)
T 3pfb_A 19 FQGMATITLERDGLQLVGTREEPFGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIA-SVRFDFN 84 (270)
T ss_dssp CCEEEEEEEEETTEEEEEEEEECSSSSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCE-EEEECCT
T ss_pred eccceEEEeccCCEEEEEEEEcCCCCCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcE-EEEEccc
Confidence 3444555566677788777665 47888888888876 33344666778888874 6688764
No 18
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=56.37 E-value=46 Score=24.31 Aligned_cols=51 Identities=20% Similarity=0.197 Sum_probs=35.7
Q ss_pred CeEEEEEEEec--CCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC-Cc
Q 029818 38 PEVEIHLYRRG--EGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG-VG 89 (187)
Q Consensus 38 peVEV~LyrrG--kGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~-~g 89 (187)
..++++....| .||.-||=-.+++....--.+-.-|.++|++ ++|||.. +|
T Consensus 8 ~g~~l~y~~~g~~~~~~vvllHG~~~~~~~w~~~~~~L~~~g~~-vi~~D~~G~G 61 (276)
T 1zoi_A 8 DGVQIFYKDWGPRDAPVIHFHHGWPLSADDWDAQLLFFLAHGYR-VVAHDRRGHG 61 (276)
T ss_dssp TSCEEEEEEESCTTSCEEEEECCTTCCGGGGHHHHHHHHHTTCE-EEEECCTTST
T ss_pred CCcEEEEEecCCCCCCeEEEECCCCcchhHHHHHHHHHHhCCCE-EEEecCCCCC
Confidence 45678877788 8988888777766555444555667777864 7889865 44
No 19
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=56.23 E-value=50 Score=23.89 Aligned_cols=49 Identities=20% Similarity=0.151 Sum_probs=34.8
Q ss_pred CeEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 38 PEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 38 peVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
.++.++....|.||.-||=-.+++....--.+-.-|.++|+. +++||..
T Consensus 7 ~g~~l~y~~~g~g~~vvllHG~~~~~~~w~~~~~~l~~~g~~-vi~~D~~ 55 (274)
T 1a8q_A 7 DGVEIFYKDWGQGRPVVFIHGWPLNGDAWQDQLKAVVDAGYR-GIAHDRR 55 (274)
T ss_dssp TSCEEEEEEECSSSEEEEECCTTCCGGGGHHHHHHHHHTTCE-EEEECCT
T ss_pred CCCEEEEEecCCCceEEEECCCcchHHHHHHHHHHHHhCCCe-EEEEcCC
Confidence 456778778899998888777766555444455667777774 6788865
No 20
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A
Probab=55.88 E-value=15 Score=26.63 Aligned_cols=51 Identities=10% Similarity=0.027 Sum_probs=37.7
Q ss_pred ccCCeEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 35 TKVPEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 35 ~~~peVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
....+++++.+..|.||.-||=-.++|....--.+-..|.+.+ .+++||..
T Consensus 14 ~~~~g~~l~~~~~g~~~~vv~lHG~~~~~~~~~~~~~~L~~~~--~vi~~D~~ 64 (302)
T 1mj5_A 14 IEIKGRRMAYIDEGTGDPILFQHGNPTSSYLWRNIMPHCAGLG--RLIACDLI 64 (302)
T ss_dssp EEETTEEEEEEEESCSSEEEEECCTTCCGGGGTTTGGGGTTSS--EEEEECCT
T ss_pred EEECCEEEEEEEcCCCCEEEEECCCCCchhhhHHHHHHhccCC--eEEEEcCC
Confidence 4567899999999999999998888876554434444455543 89999875
No 21
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=55.57 E-value=6.7 Score=26.92 Aligned_cols=40 Identities=18% Similarity=0.272 Sum_probs=33.1
Q ss_pred eEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCce
Q 029818 39 EVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFK 79 (187)
Q Consensus 39 eVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLK 79 (187)
.|++.+.|.|.|=...+...|.+|..|+ +-.+.+.+.||.
T Consensus 52 ~v~l~v~R~g~~~~~~~~l~l~~~~~~~-~~~~~l~~lGl~ 91 (95)
T 3id1_A 52 STTITVAPFGSDQRRDVKLDLRHWAFEP-DKEDPVSSLGIR 91 (95)
T ss_dssp EEEEEEECTTCCCCEEEEEECTTCCCCT-TTSCHHHHTTEE
T ss_pred cEEEEEEECCCCceEEEEEEccccccCC-CCCCHHHHcCcc
Confidence 6899999999876678899999998777 346888888885
No 22
>4e8j_A Lincosamide resistance protein; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: MSE LN0; 1.82A {Staphylococcus haemolyticus} PDB: 4e8i_A* 4fo1_A*
Probab=55.20 E-value=10 Score=30.33 Aligned_cols=57 Identities=19% Similarity=0.220 Sum_probs=42.7
Q ss_pred ccchhhHHHHHHHhCceEEEeeeCCCccccceeecCCCC-ccccccc---CCcEEE--eCCC----cCCCc
Q 029818 63 DQDQLDVREILDKYGFKSVYAFSTGVGRGVPIRFNRRNG-RSMLGYK---DGSVVY--MDGE----PQDSM 123 (187)
Q Consensus 63 eqDqLev~~Il~k~gLKalfAf~p~~gRGv~irfnPrnG-~SlL~Y~---dgsvI~--lDGE----PKdS~ 123 (187)
.+|+-.++..|+.+|+.....|.|.+ ---++++.+ -.+.||. ||++++ +||+ |.+++
T Consensus 53 ~~d~~~l~~~L~~~Gf~~~~~~~p~~----~~l~~~~~~~iDlh~~~~~~dG~~~~~~~~g~~~~fp~~~f 119 (161)
T 4e8j_A 53 AQHTQKVIQKLEDIGYKIEVHWMPSR----MELKHEEYGYLDIHPINLNDDGSITQANPEGGNYVFQNDWF 119 (161)
T ss_dssp GGGHHHHHHHHHHTTCEEEEEETTTE----EEEEETTTEEEEEEEEEECTTSCEEEECTTSSEEEECGGGE
T ss_pred HHhHHHHHHHHHHCCCEEeecCCcee----EEEEcCCCCEEEEEEEEEcCCCcEEecccCCceeEcCccce
Confidence 47899999999999999999998773 233477774 6777854 777663 6686 77665
No 23
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}
Probab=54.37 E-value=57 Score=23.34 Aligned_cols=52 Identities=13% Similarity=0.038 Sum_probs=37.8
Q ss_pred ccCCeEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 35 TKVPEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 35 ~~~peVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
...++..++.+..|.||.-||=-.++|....-..+-.-|-..|+ .+++||..
T Consensus 14 ~~~~g~~l~~~~~g~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~-~v~~~d~~ 65 (309)
T 3u1t_A 14 VEVEGATIAYVDEGSGQPVLFLHGNPTSSYLWRNIIPYVVAAGY-RAVAPDLI 65 (309)
T ss_dssp EEETTEEEEEEEEECSSEEEEECCTTCCGGGGTTTHHHHHHTTC-EEEEECCT
T ss_pred EEECCeEEEEEEcCCCCEEEEECCCcchhhhHHHHHHHHHhCCC-EEEEEccC
Confidence 45589999999999999999988887765554444444344465 57788865
No 24
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=52.31 E-value=63 Score=23.39 Aligned_cols=50 Identities=18% Similarity=0.121 Sum_probs=34.0
Q ss_pred CCeEEEEEEEec--CCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 37 VPEVEIHLYRRG--EGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 37 ~peVEV~LyrrG--kGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
..++.++....| .||.-||=-.+++....--.+-.-|.++|+ .+++||..
T Consensus 6 ~~g~~l~y~~~g~~~~~~vvllHG~~~~~~~w~~~~~~l~~~g~-~vi~~D~~ 57 (275)
T 1a88_A 6 SDGTNIFYKDWGPRDGLPVVFHHGWPLSADDWDNQMLFFLSHGY-RVIAHDRR 57 (275)
T ss_dssp TTSCEEEEEEESCTTSCEEEEECCTTCCGGGGHHHHHHHHHTTC-EEEEECCT
T ss_pred cCCCEEEEEEcCCCCCceEEEECCCCCchhhHHHHHHHHHHCCc-eEEEEcCC
Confidence 356678877778 898878876666655444445556677776 56788865
No 25
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=51.81 E-value=30 Score=23.63 Aligned_cols=50 Identities=14% Similarity=0.066 Sum_probs=38.5
Q ss_pred CCeEEEE---EEEecCCceeEeecCcCCcccchhh--HHHHHHHhCceEEEeeeCC
Q 029818 37 VPEVEIH---LYRRGEGPIAVFKSSLVGWDQDQLD--VREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 37 ~peVEV~---LyrrGkGPvavFKs~LgG~eqDqLe--v~~Il~k~gLKalfAf~p~ 87 (187)
....+++ .+..|++|.-+|=-.++|...+-.+ +-+-|.++|+ .++++|..
T Consensus 11 ~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~-~v~~~d~~ 65 (207)
T 3bdi_A 11 VNGTRVFQRKMVTDSNRRSIALFHGYSFTSMDWDKADLFNNYSKIGY-NVYAPDYP 65 (207)
T ss_dssp ETTEEEEEEEECCTTCCEEEEEECCTTCCGGGGGGGTHHHHHHTTTE-EEEEECCT
T ss_pred eCCcEEEEEEEeccCCCCeEEEECCCCCCccccchHHHHHHHHhCCC-eEEEEcCC
Confidence 3566677 6667889999999999888777777 8888888887 56677754
No 26
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0
Probab=51.33 E-value=45 Score=24.65 Aligned_cols=51 Identities=16% Similarity=0.131 Sum_probs=35.3
Q ss_pred cCCeEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 36 KVPEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 36 ~~peVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
...+++++....|.||--||=-.++|....=-.+-.-|.+.|++ +++||..
T Consensus 13 ~~~g~~l~y~~~G~g~~vvllHG~~~~~~~w~~~~~~l~~~g~~-vi~~D~~ 63 (281)
T 3fob_A 13 NQAPIEIYYEDHGTGKPVVLIHGWPLSGRSWEYQVPALVEAGYR-VITYDRR 63 (281)
T ss_dssp TTEEEEEEEEEESSSEEEEEECCTTCCGGGGTTTHHHHHHTTEE-EEEECCT
T ss_pred CCCceEEEEEECCCCCeEEEECCCCCcHHHHHHHHHHHHhCCCE-EEEeCCC
Confidence 45678899889999998888666665544433344556666764 7788875
No 27
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=50.67 E-value=60 Score=23.35 Aligned_cols=54 Identities=13% Similarity=0.172 Sum_probs=39.7
Q ss_pred ccccCCeEEEEEEEecCCceeEeecCcCCcccchh-hHHHHHHHhCceEEEeeeCC
Q 029818 33 VKTKVPEVEIHLYRRGEGPIAVFKSSLVGWDQDQL-DVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 33 ~~~~~peVEV~LyrrGkGPvavFKs~LgG~eqDqL-ev~~Il~k~gLKalfAf~p~ 87 (187)
...+...+.++....|.||.-||=-.++|....-. .+-..+.+.|+ .++++|..
T Consensus 26 ~~~~~~~~~l~y~~~g~~~~vv~lHG~~~~~~~~~~~~~~~l~~~g~-~vi~~D~~ 80 (293)
T 3hss_A 26 MDPEFRVINLAYDDNGTGDPVVFIAGRGGAGRTWHPHQVPAFLAAGY-RCITFDNR 80 (293)
T ss_dssp ECTTSCEEEEEEEEECSSEEEEEECCTTCCGGGGTTTTHHHHHHTTE-EEEEECCT
T ss_pred cccccccceEEEEEcCCCCEEEEECCCCCchhhcchhhhhhHhhcCC-eEEEEccC
Confidence 33467789999999999999999888887665544 34455555665 57888875
No 28
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Probab=50.20 E-value=35 Score=24.95 Aligned_cols=58 Identities=9% Similarity=-0.028 Sum_probs=40.6
Q ss_pred cccccCCeEEEEEEEecC----CceeEeecCcCCcccc----hhh--HHHHHHHhCceEEEeeeCC-Cccc
Q 029818 32 TVKTKVPEVEIHLYRRGE----GPIAVFKSSLVGWDQD----QLD--VREILDKYGFKSVYAFSTG-VGRG 91 (187)
Q Consensus 32 ~~~~~~peVEV~LyrrGk----GPvavFKs~LgG~eqD----qLe--v~~Il~k~gLKalfAf~p~-~gRG 91 (187)
+.+|+.+.+.++.+..|. ||.-||=-.++|...+ +.+ +-+.|.+ + =.+++||.. .|++
T Consensus 13 ~~~~~~~~~~l~y~~~G~~~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~~-~-~~vi~~D~~G~G~s 81 (286)
T 2qmq_A 13 THSVETPYGSVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQ-N-FVRVHVDAPGMEEG 81 (286)
T ss_dssp EEEEEETTEEEEEEEESCCCTTCCEEEEECCTTCCHHHHHHHHHTSHHHHHHHT-T-SCEEEEECTTTSTT
T ss_pred ccccccCCeEEEEEeccCCCCCCCeEEEeCCCCCCchhhhhhhhhhchhHHHhc-C-CCEEEecCCCCCCC
Confidence 456888999999999994 8998997777766543 222 4555665 3 467899976 5443
No 29
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=50.04 E-value=37 Score=24.33 Aligned_cols=48 Identities=15% Similarity=0.115 Sum_probs=36.9
Q ss_pred CeEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 38 PEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 38 peVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
.+.++. |..|.+|.-||=-.++|...+--.+-..|.++|+. ++++|..
T Consensus 29 ~g~~~~-~~~g~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~-v~~~d~~ 76 (270)
T 3rm3_A 29 SGAEPF-YAENGPVGVLLVHGFTGTPHSMRPLAEAYAKAGYT-VCLPRLK 76 (270)
T ss_dssp TTCCCE-EECCSSEEEEEECCTTCCGGGTHHHHHHHHHTTCE-EEECCCT
T ss_pred CCCccc-ccCCCCeEEEEECCCCCChhHHHHHHHHHHHCCCE-EEEeCCC
Confidence 444443 67899999999999998888777788888888874 6777754
No 30
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A
Probab=48.28 E-value=40 Score=24.32 Aligned_cols=51 Identities=20% Similarity=0.197 Sum_probs=40.2
Q ss_pred ccCCeEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 35 TKVPEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 35 ~~~peVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
.......++.+..|.||.-||=-.++|....--.+-.-|.++ -.+++||..
T Consensus 15 ~~~~g~~l~~~~~g~~~~vv~lHG~~~~~~~~~~~~~~L~~~--~~vi~~D~~ 65 (301)
T 3kda_A 15 REVDGVKLHYVKGGQGPLVMLVHGFGQTWYEWHQLMPELAKR--FTVIAPDLP 65 (301)
T ss_dssp EEETTEEEEEEEEESSSEEEEECCTTCCGGGGTTTHHHHTTT--SEEEEECCT
T ss_pred EeeCCeEEEEEEcCCCCEEEEECCCCcchhHHHHHHHHHHhc--CeEEEEcCC
Confidence 456889999999999999999888888766655556666666 568888875
No 31
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Probab=47.60 E-value=57 Score=24.29 Aligned_cols=52 Identities=17% Similarity=0.115 Sum_probs=37.0
Q ss_pred CCeEEEEEEEec--CCceeEeecCcCCcccchhh-HHHHHHHhCceEEEeeeCC-Cc
Q 029818 37 VPEVEIHLYRRG--EGPIAVFKSSLVGWDQDQLD-VREILDKYGFKSVYAFSTG-VG 89 (187)
Q Consensus 37 ~peVEV~LyrrG--kGPvavFKs~LgG~eqDqLe-v~~Il~k~gLKalfAf~p~-~g 89 (187)
..++.++.+..| .||.-||=-.+++....--. +-+.|.++|++ +++||.. +|
T Consensus 8 ~~g~~l~y~~~G~~~~~~vvllHG~~~~~~~w~~~~~~~L~~~G~~-vi~~D~rG~G 63 (298)
T 1q0r_A 8 SGDVELWSDDFGDPADPALLLVMGGNLSALGWPDEFARRLADGGLH-VIRYDHRDTG 63 (298)
T ss_dssp ETTEEEEEEEESCTTSCEEEEECCTTCCGGGSCHHHHHHHHTTTCE-EEEECCTTST
T ss_pred cCCeEEEEEeccCCCCCeEEEEcCCCCCccchHHHHHHHHHhCCCE-EEeeCCCCCC
Confidence 456788888888 89988887777765544323 44667788875 6799865 44
No 32
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Probab=46.99 E-value=68 Score=22.87 Aligned_cols=53 Identities=15% Similarity=0.053 Sum_probs=40.5
Q ss_pred ccccCCeEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 33 VKTKVPEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 33 ~~~~~peVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
.........++.+..|.||.-||=-.++|.-..--.+-..|.+ |+ .+++||..
T Consensus 16 ~~~~~~g~~l~~~~~g~~~~vv~lHG~~~~~~~~~~~~~~l~~-~~-~v~~~D~~ 68 (306)
T 3r40_A 16 EWINTSSGRIFARVGGDGPPLLLLHGFPQTHVMWHRVAPKLAE-RF-KVIVADLP 68 (306)
T ss_dssp EEECCTTCCEEEEEEECSSEEEEECCTTCCGGGGGGTHHHHHT-TS-EEEEECCT
T ss_pred EEEEeCCEEEEEEEcCCCCeEEEECCCCCCHHHHHHHHHHhcc-CC-eEEEeCCC
Confidence 3345688899999999999999988888876665566666776 65 57788865
No 33
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica}
Probab=46.12 E-value=49 Score=25.28 Aligned_cols=54 Identities=13% Similarity=0.093 Sum_probs=38.9
Q ss_pred ccCCe----EEEEEEEec--C-CceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC-Cc
Q 029818 35 TKVPE----VEIHLYRRG--E-GPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG-VG 89 (187)
Q Consensus 35 ~~~pe----VEV~LyrrG--k-GPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~-~g 89 (187)
..+.+ +.+|.+..| . ||.-||=-.++++...=-.+-+.|.++|++ ++|+|.- +|
T Consensus 24 ~~~~g~~~g~~l~y~~~G~~~~g~~vvllHG~~~~~~~w~~~~~~L~~~g~r-via~Dl~G~G 85 (297)
T 2xt0_A 24 LEGLPGFEGLRMHYVDEGPRDAEHTFLCLHGEPSWSFLYRKMLPVFTAAGGR-VVAPDLFGFG 85 (297)
T ss_dssp ECCCTTCTTCCEEEEEESCTTCSCEEEEECCTTCCGGGGTTTHHHHHHTTCE-EEEECCTTST
T ss_pred EeccCCCCceEEEEEEccCCCCCCeEEEECCCCCcceeHHHHHHHHHhCCcE-EEEeCCCCCC
Confidence 34555 899999999 6 898888777777665444455667777875 6899975 55
No 34
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni}
Probab=45.87 E-value=11 Score=26.54 Aligned_cols=49 Identities=10% Similarity=0.094 Sum_probs=31.9
Q ss_pred ccCCeEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHH----hCceEEEeeeCC
Q 029818 35 TKVPEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDK----YGFKSVYAFSTG 87 (187)
Q Consensus 35 ~~~peVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k----~gLKalfAf~p~ 87 (187)
.++.++.++.+..|+||.-||=-.++|. .-....+++. .|+ .+++||..
T Consensus 6 ~~~~g~~l~y~~~g~~~~vv~lhG~~~~---~~~~~~~~~~l~~~~g~-~v~~~d~~ 58 (272)
T 3fsg_A 6 EYLTRSNISYFSIGSGTPIIFLHGLSLD---KQSTCLFFEPLSNVGQY-QRIYLDLP 58 (272)
T ss_dssp CEECTTCCEEEEECCSSEEEEECCTTCC---HHHHHHHHTTSTTSTTS-EEEEECCT
T ss_pred EEecCCeEEEEEcCCCCeEEEEeCCCCc---HHHHHHHHHHHhccCce-EEEEecCC
Confidence 4567788999999999999995555443 3334444333 344 46677764
No 35
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A
Probab=45.42 E-value=83 Score=22.67 Aligned_cols=51 Identities=18% Similarity=0.152 Sum_probs=35.2
Q ss_pred cCCeEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 36 KVPEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 36 ~~peVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
..-++.++....|.||--||=-.+++....--.+-.-|.+.|++ +++||..
T Consensus 5 ~~~g~~l~y~~~G~g~~vvllHG~~~~~~~w~~~~~~l~~~g~~-vi~~D~~ 55 (271)
T 3ia2_A 5 AKDGTQIYFKDWGSGKPVLFSHGWLLDADMWEYQMEYLSSRGYR-TIAFDRR 55 (271)
T ss_dssp CTTSCEEEEEEESSSSEEEEECCTTCCGGGGHHHHHHHHTTTCE-EEEECCT
T ss_pred cCCCCEEEEEccCCCCeEEEECCCCCcHHHHHHHHHHHHhCCce-EEEecCC
Confidence 34567888888999998888666666554433444556666764 6788865
No 36
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=44.33 E-value=25 Score=25.07 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=32.1
Q ss_pred ccCCeEEEEEEEecCCceeEee--cCcCCcccchhhHHHHHHHhCc
Q 029818 35 TKVPEVEIHLYRRGEGPIAVFK--SSLVGWDQDQLDVREILDKYGF 78 (187)
Q Consensus 35 ~~~peVEV~LyrrGkGPvavFK--s~LgG~eqDqLev~~Il~k~gL 78 (187)
..+| .+-+|+.|+ .++-+- .++||-+.+.-+|+..|.++|.
T Consensus 72 ~~~P--T~~~fk~G~-~v~~~~G~~~~gg~~~~~~~le~~L~~~g~ 114 (118)
T 3evi_A 72 NCLP--TIFVYKNGQ-IEAKFIGIIECGGINLKLEELEWKLAEVGA 114 (118)
T ss_dssp GGCS--EEEEEETTE-EEEEEESTTTTTCSSCCHHHHHHHHHTTTS
T ss_pred CCCC--EEEEEECCE-EEEEEeChhhhCCCCCCHHHHHHHHHHcCC
Confidence 3567 578899998 666665 3567878888899999999985
No 37
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*
Probab=43.45 E-value=88 Score=22.73 Aligned_cols=50 Identities=14% Similarity=0.130 Sum_probs=35.7
Q ss_pred CCeEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 37 VPEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 37 ~peVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
...++++....|.||--||=-.+++....--.+-.-|.++|+. +++||..
T Consensus 10 ~~g~~l~y~~~g~~~pvvllHG~~~~~~~~~~~~~~L~~~g~~-vi~~D~~ 59 (279)
T 1hkh_A 10 STPIELYYEDQGSGQPVVLIHGYPLDGHSWERQTRELLAQGYR-VITYDRR 59 (279)
T ss_dssp TEEEEEEEEEESSSEEEEEECCTTCCGGGGHHHHHHHHHTTEE-EEEECCT
T ss_pred CCCeEEEEEecCCCCcEEEEcCCCchhhHHhhhHHHHHhCCcE-EEEeCCC
Confidence 4567888888899987788776766554444455667777875 6789865
No 38
>2f9z_C Protein (chemotaxis methylation protein); bacterial chemotaxis, signal transduction, receptor deamidas aspartyl phosphatase, protein complex; 2.40A {Thermotoga maritima} SCOP: d.194.1.3
Probab=42.48 E-value=20 Score=28.39 Aligned_cols=66 Identities=21% Similarity=0.411 Sum_probs=45.9
Q ss_pred CeEEEEEEEecCCceeEeecC-c-CCcccchhhHHHHHHHhCceEEEeeeCCCccccceeecCCCCcccccccC
Q 029818 38 PEVEIHLYRRGEGPIAVFKSS-L-VGWDQDQLDVREILDKYGFKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKD 109 (187)
Q Consensus 38 peVEV~LyrrGkGPvavFKs~-L-gG~eqDqLev~~Il~k~gLKalfAf~p~~gRGv~irfnPrnG~SlL~Y~d 109 (187)
-+.++.+|==+ .+|... . -| ++|--=++++|+++|++.+ |-|.....|=.|+|||.+|+-.+-.-+
T Consensus 82 ~~L~aKifGGA----~m~~~~~~~IG-~rNv~~a~~~L~~~gI~i~-aeD~GG~~gR~i~f~~~tG~v~vk~~~ 149 (159)
T 2f9z_C 82 ERLEAKIAGGA----SMFESKGMNIG-ARNVEAVKKHLKDFGIKLL-AEDTGGNRARSVEYNIETGKLLVRKVG 149 (159)
T ss_dssp GGCEEEEEECC----CCSCCCSSCHH-HHHHHHHHHHHHHTTCCEE-EEEECCSSCEEEEEETTTTEEEEECC-
T ss_pred HHEEEEEEeCc----ccCcccccChH-HHHHHHHHHHHHHCCCcEE-EEeCCCCCCcEEEEECCCCEEEEEEcC
Confidence 45666676322 345432 0 11 3566668899999999865 778887788899999999998876553
No 39
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11
Probab=42.21 E-value=80 Score=23.70 Aligned_cols=53 Identities=25% Similarity=0.340 Sum_probs=37.7
Q ss_pred ccCCeEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC-Cc
Q 029818 35 TKVPEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG-VG 89 (187)
Q Consensus 35 ~~~peVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~-~g 89 (187)
....++++|.+..|.||.-||=-.++|....=-.+-.-|.++ -.++|+|.- +|
T Consensus 14 ~~~~g~~l~y~~~G~g~~lvllHG~~~~~~~w~~~~~~L~~~--~~via~Dl~G~G 67 (294)
T 1ehy_A 14 VQLPDVKIHYVREGAGPTLLLLHGWPGFWWEWSKVIGPLAEH--YDVIVPDLRGFG 67 (294)
T ss_dssp EECSSCEEEEEEEECSSEEEEECCSSCCGGGGHHHHHHHHTT--SEEEEECCTTST
T ss_pred EEECCEEEEEEEcCCCCEEEEECCCCcchhhHHHHHHHHhhc--CEEEecCCCCCC
Confidence 345788999999999999899777777555433444555555 368899975 44
No 40
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Probab=41.11 E-value=74 Score=26.64 Aligned_cols=51 Identities=12% Similarity=0.151 Sum_probs=40.3
Q ss_pred cCCeEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 36 KVPEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 36 ~~peVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
....+.++.+..|.||.-||=-.++|....--.+-.-|.+.|+. +++||..
T Consensus 10 ~~dG~~l~y~~~G~gp~VV~lHG~~~~~~~~~~l~~~La~~Gy~-Vi~~D~r 60 (456)
T 3vdx_A 10 NSTSIDLYYEDHGTGVPVVLIHGFPLSGHSWERQSAALLDAGYR-VITYDRR 60 (456)
T ss_dssp TTEEEEEEEEEESSSEEEEEECCTTCCGGGGTTHHHHHHHHTEE-EEEECCT
T ss_pred ccCCeEEEEEEeCCCCEEEEECCCCCcHHHHHHHHHHHHHCCcE-EEEECCC
Confidence 45789999999999999999888877666655677777777875 6788865
No 41
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=41.06 E-value=90 Score=21.82 Aligned_cols=50 Identities=20% Similarity=0.262 Sum_probs=35.0
Q ss_pred cCCeEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 36 KVPEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 36 ~~peVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
...+..++.+..|.||.-||=-.++|....--.+-..|. .|+ .+++||..
T Consensus 9 ~~~g~~l~~~~~g~~~~vv~lHG~~~~~~~~~~~~~~l~-~~~-~vi~~d~~ 58 (262)
T 3r0v_A 9 SSDGTPIAFERSGSGPPVVLVGGALSTRAGGAPLAERLA-PHF-TVICYDRR 58 (262)
T ss_dssp CTTSCEEEEEEEECSSEEEEECCTTCCGGGGHHHHHHHT-TTS-EEEEECCT
T ss_pred cCCCcEEEEEEcCCCCcEEEECCCCcChHHHHHHHHHHh-cCc-EEEEEecC
Confidence 456788999999999999997776665554434444554 454 57888875
No 42
>3il0_A Aminopeptidase P; XAA-Pro aminopeptidase; structural genomics MCSG, protein structure initiative, midwest center for STRU genomics; HET: GOL; 2.20A {Streptococcus thermophilus}
Probab=40.12 E-value=20 Score=24.73 Aligned_cols=50 Identities=14% Similarity=0.160 Sum_probs=33.5
Q ss_pred chh-hHHHHHHHhCceEEEeeeCCCc---cccceeecCCCCcccccccCCcEEEeCCCc
Q 029818 65 DQL-DVREILDKYGFKSVYAFSTGVG---RGVPIRFNRRNGRSMLGYKDGSVVYMDGEP 119 (187)
Q Consensus 65 DqL-ev~~Il~k~gLKalfAf~p~~g---RGv~irfnPrnG~SlL~Y~dgsvI~lDGEP 119 (187)
+++ .+++.|+++|+.+++-.++..= =| |...+|.-+++ .++++++.|+.-
T Consensus 6 ~Rl~~lr~~m~~~~~da~li~~~~ni~YltG----f~~~~~~llv~-~~~~~l~~d~r~ 59 (131)
T 3il0_A 6 RRLERFDAKLVQSGLDALLVTGQNNIYYLTD----FWGTNATVFIT-KNRRLFLTDSRY 59 (131)
T ss_dssp GHHHHHHHHHHHHTCSEEEECSHHHHHHHHS----CCCSSEEEEEE-SSCEEEEECTTS
T ss_pred HHHHHHHHHHHHcCCCEEEEecccccEEEeC----cccCCeEEEEE-CCCCEEEECchh
Confidence 444 4899999999999999988621 11 12234555554 568888888743
No 43
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Probab=40.07 E-value=33 Score=24.74 Aligned_cols=51 Identities=25% Similarity=0.356 Sum_probs=32.4
Q ss_pred cCCeEEEEEEEecCCc-eeEeecCcCCc-ccchhhHHHHHHHhCceEEEeeeCC
Q 029818 36 KVPEVEIHLYRRGEGP-IAVFKSSLVGW-DQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 36 ~~peVEV~LyrrGkGP-vavFKs~LgG~-eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
+..+++++.+..|.|+ .-||=-.++|. ..+-..+-+-|.++|+ .+++||..
T Consensus 8 ~~~g~~l~~~~~g~~~~~vvllHG~~~~~~~~~~~~~~~l~~~g~-~vi~~D~~ 60 (254)
T 2ocg_A 8 AVNGVQLHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNKKLF-TVVAWDPR 60 (254)
T ss_dssp EETTEEEEEEEEECCSEEEEEECCTTCCHHHHCHHHHHHSCTTTE-EEEEECCT
T ss_pred EECCEEEEEEEecCCCCeEEEECCCCCCCccchHHHHHHHhhCCC-eEEEECCC
Confidence 4567889988888886 56665555554 2222233444556664 58899975
No 44
>2kue_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=39.89 E-value=45 Score=24.09 Aligned_cols=53 Identities=19% Similarity=0.136 Sum_probs=40.1
Q ss_pred CcCCcccchhhHHHHHHHhCceEE-EeeeCCCcc--ccceeecCCCCcccccccCCcEEEe
Q 029818 58 SLVGWDQDQLDVREILDKYGFKSV-YAFSTGVGR--GVPIRFNRRNGRSMLGYKDGSVVYM 115 (187)
Q Consensus 58 ~LgG~eqDqLev~~Il~k~gLKal-fAf~p~~gR--Gv~irfnPrnG~SlL~Y~dgsvI~l 115 (187)
++.|.+.+ |.+..|++.||+.- ..|+..... |.-|.-+|..|-.+- .|+.|.|
T Consensus 12 dv~G~~~~--~A~~~L~~~gl~~~~~~~~~~~~~~~g~Vi~q~P~~G~~v~---~g~~V~l 67 (138)
T 2kue_A 12 DVSTLTYA--EAVKKLTAAGFGRFKQANSPSTPELVGKVIGTNPPANQTSA---ITNVVII 67 (138)
T ss_dssp TTTTTCHH--HHHHHHHHTTCCCEEEEEEECCGGGTTSEEEESSCSSSEEE---TTSCEEE
T ss_pred CcCCCCHH--HHHHHHHHCCCccceEEeCCCCCccCCEEEEecCCCCCCcC---CCCEEEE
Confidence 57787765 68999999999875 567776667 999999999997754 3555544
No 45
>1k5j_A Nucleoplasmin core; beta-barrel, jellyroll, beta-bulge, pentamer, chaperone; 2.30A {Xenopus laevis} SCOP: b.121.3.1 PDB: 2vtx_A 2vtx_J
Probab=38.83 E-value=20 Score=27.80 Aligned_cols=17 Identities=35% Similarity=0.784 Sum_probs=12.6
Q ss_pred CeEEEEEEEecCCceeEe
Q 029818 38 PEVEIHLYRRGEGPIAVF 55 (187)
Q Consensus 38 peVEV~LyrrGkGPvavF 55 (187)
|-|..+| ++|.||||+-
T Consensus 98 pPVtF~L-~~GSGPVhis 114 (124)
T 1k5j_A 98 PPVTFRL-KAGSGPLYIS 114 (124)
T ss_dssp SCEEEEE-EECCCCEEEE
T ss_pred CCEEEEE-EEcCCCeEEE
Confidence 4555555 7899999974
No 46
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A
Probab=38.43 E-value=17 Score=22.83 Aligned_cols=33 Identities=12% Similarity=0.275 Sum_probs=23.5
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSM 123 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~ 123 (187)
.+++|.|+++... =|+++.|++|.+=.+..+.|
T Consensus 24 ~~alydy~a~~~~-------------eLsf~~Gd~i~v~~~~~~~W 56 (62)
T 1g2b_A 24 VLALYDYQEKSPR-------------EVTMKKGDILTLLNSTNKDW 56 (62)
T ss_dssp EEECSCBCCSSTT-------------BCCBCTTCEEEEEECCSSSE
T ss_pred EEEeeeECCCCCC-------------ccCCCCCCEEEEEEecCCCE
Confidence 5889999876432 37788999998866544444
No 47
>1nlq_A Nucleoplasmin-like protein; DNLP, chaperone, histone binding, X-RAY crystallography, ligand binding; 1.50A {Drosophila melanogaster} SCOP: b.121.3.1
Probab=37.81 E-value=21 Score=26.66 Aligned_cols=17 Identities=29% Similarity=0.700 Sum_probs=11.5
Q ss_pred CeEEEEEEEecCCceeEe
Q 029818 38 PEVEIHLYRRGEGPIAVF 55 (187)
Q Consensus 38 peVEV~LyrrGkGPvavF 55 (187)
|.|+.+| +.|.||||+-
T Consensus 84 ~pVtf~L-~~GsGPVhis 100 (108)
T 1nlq_A 84 SKVTFKL-IKGSGPVYIH 100 (108)
T ss_dssp SCEEEEE-EESCCCEEEE
T ss_pred CCEEEEE-EecCCCEEEE
Confidence 4444443 6899999874
No 48
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A
Probab=37.73 E-value=16 Score=22.37 Aligned_cols=34 Identities=18% Similarity=0.452 Sum_probs=23.8
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|.
T Consensus 6 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~W~ 39 (58)
T 2drm_A 6 VKALYDYDAQTG-------------DELTFKEGDTIIVHQKDPAGWW 39 (58)
T ss_dssp EEESSCBCCCST-------------TBCCBCTTCEEEEEECCTTSEE
T ss_pred EEECccCCCCCc-------------CCcCCCCCCEEEEEEecCCCEE
Confidence 467888877642 2488899999998666545553
No 49
>1xe0_A Nucleophosmin; drosophila nucleoplasmin-like protein (DNLP), nucleoplasmin (NP), histone binding, X-RAY crystallography, chaperone; 1.70A {Xenopus laevis} SCOP: b.121.3.1 PDB: 1xb9_A 2p1b_A
Probab=37.35 E-value=22 Score=27.11 Aligned_cols=17 Identities=41% Similarity=0.788 Sum_probs=12.8
Q ss_pred CeEEEEEEEecCCceeEe
Q 029818 38 PEVEIHLYRRGEGPIAVF 55 (187)
Q Consensus 38 peVEV~LyrrGkGPvavF 55 (187)
|.|+.+| +.|.||||+-
T Consensus 88 ppVtF~L-~~GsGPVhis 104 (114)
T 1xe0_A 88 PPVILRL-KSGSGPVYVS 104 (114)
T ss_dssp SCEEEEE-EESCCCEEEE
T ss_pred CCEEEEE-EEcCCCEEEE
Confidence 5566655 7899999974
No 50
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Probab=37.24 E-value=83 Score=24.23 Aligned_cols=49 Identities=14% Similarity=0.179 Sum_probs=36.2
Q ss_pred EEEEEEEec--C-CceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC-Cc
Q 029818 40 VEIHLYRRG--E-GPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG-VG 89 (187)
Q Consensus 40 VEV~LyrrG--k-GPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~-~g 89 (187)
+.+|....| . ||.-||=-.++++...=-.+-..|.++|++ ++|+|.- +|
T Consensus 34 ~~l~y~~~G~~~~g~~vvllHG~~~~~~~w~~~~~~L~~~g~r-via~Dl~G~G 86 (310)
T 1b6g_A 34 LRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGAR-VIAPDFFGFG 86 (310)
T ss_dssp CEEEEEEEECTTCSCEEEECCCTTCCGGGGTTTHHHHHHTTCE-EEEECCTTST
T ss_pred eEEEEEEeCCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCe-EEEeCCCCCC
Confidence 899999999 7 998888777777665433455667788875 6699865 44
No 51
>1rh5_C Secbeta; protein translocation, SECY, membrane protein, protein channels, protein transport; 3.20A {Methanocaldococcus jannaschii} SCOP: f.23.29.1 PDB: 1rhz_C 2yxq_C 2yxr_C 3kcr_C 3dkn_C 3bo1_C 3bo0_C
Probab=36.42 E-value=43 Score=22.46 Aligned_cols=36 Identities=22% Similarity=0.288 Sum_probs=22.1
Q ss_pred cCCcEEEeCCCcCCCccchhhHHHHHHHHHHHHHHH
Q 029818 108 KDGSVVYMDGEPQDSMIKPVTKILFGLTVITLLITL 143 (187)
Q Consensus 108 ~dgsvI~lDGEPKdS~~KPvtri~~gva~vtlmi~~ 143 (187)
+.|=+=|+|.|-..-=+.|.+.+.++++.+.+++++
T Consensus 12 saGLvryy~ee~~giKi~P~~Vl~~si~~i~~V~~L 47 (53)
T 1rh5_C 12 SAGLIRYMDETFSKIRVKPEHVIGVTVAFVIIEAIL 47 (53)
T ss_dssp ---------CCCCSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhhccCCccccCCeehhhhHHHHHHHHHHH
Confidence 356666777766666689999999999998887764
No 52
>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A
Probab=36.39 E-value=15 Score=22.71 Aligned_cols=35 Identities=14% Similarity=0.378 Sum_probs=23.9
Q ss_pred CceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 77 GFKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 77 gLKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
-.+++|.|+++.. .-|+++.|++|.+-.+..+.|.
T Consensus 8 ~~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~W~ 42 (64)
T 4f14_A 8 TYRAMYDYSAQDE-------------DEVSFRDGDYIVNVQPIDDGWM 42 (64)
T ss_dssp CEEESSCBCCCST-------------TBCCBCTTCEEEEEEECSSSEE
T ss_pred EEEECeeeCCcCC-------------CcCCCCCCCEEEEEEeCCCCeE
Confidence 3578888877632 2388899999988665545553
No 53
>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=35.04 E-value=24 Score=24.06 Aligned_cols=34 Identities=12% Similarity=0.508 Sum_probs=24.3
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCc--CCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEP--QDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEP--KdS~~ 124 (187)
.+++|.|+++.. .-|+|+.|++|.+..+. .+-|.
T Consensus 8 ~~Alydy~a~~~-------------~eLsf~~Gd~i~v~~~~~~~~gWw 43 (93)
T 1uff_A 8 YRALYPFEARNH-------------DEMSFNSGDIIQVDEKTVGEPGWL 43 (93)
T ss_dssp EEESSCBCCCSS-------------SCCCBCTTCEEEECSSCCCSSSEE
T ss_pred EEECccCCCCCC-------------CCcCCCCCCEEEEeEccCCCCCEE
Confidence 578888876532 24889999999998765 45553
No 54
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A
Probab=34.85 E-value=18 Score=22.23 Aligned_cols=34 Identities=21% Similarity=0.291 Sum_probs=23.5
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|.
T Consensus 5 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~Ww 38 (58)
T 1zx6_A 5 VEALYQFDPQQD-------------GDLGLKPGDKVQLLEKLSPEWY 38 (58)
T ss_dssp EEECSCBCCCST-------------TBCCBCTTCEEEEEEECSSSEE
T ss_pred EEECceECCCCC-------------CCccCCCCCEEEEEEecCCCEE
Confidence 467888876532 3588899999998766555553
No 55
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=34.71 E-value=20 Score=21.87 Aligned_cols=33 Identities=15% Similarity=0.479 Sum_probs=22.3
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSM 123 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~ 123 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|
T Consensus 4 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~W 36 (57)
T 1cka_A 4 VRALFDFNGNDE-------------EDLPFKKGDILRIRDKPEEQW 36 (57)
T ss_dssp EEESSCBCCSST-------------TBCCBCTTCEEEEEECSSSSE
T ss_pred EEECCcCCCCCC-------------CCCCCCCCCEEEEEEecCCCc
Confidence 467888876532 238889999998865544545
No 56
>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*
Probab=34.57 E-value=14 Score=30.90 Aligned_cols=39 Identities=21% Similarity=0.548 Sum_probs=23.1
Q ss_pred CceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCc
Q 029818 77 GFKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSM 123 (187)
Q Consensus 77 gLKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~ 123 (187)
-.||+|.|||+..-++|-. | |+|+-|++++++-.--+-|
T Consensus 7 yvRa~fdY~~~~D~~~P~~-----g---L~F~~gDiL~V~~~~d~~w 45 (292)
T 3tvt_A 7 YVRALFDYDPNRDDGLPSR-----G---LPFKHGDILHVTNASDDEW 45 (292)
T ss_dssp EEEECSCBCC--------------C---CCBCTTCEEEEEECCSSSE
T ss_pred EEEEeccCCCCCCCCCCCC-----c---CCcCCCCEEEEeecCCCCe
Confidence 4689999999977777642 6 7899999999865533333
No 57
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A
Probab=34.54 E-value=19 Score=22.00 Aligned_cols=33 Identities=15% Similarity=0.379 Sum_probs=23.5
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSM 123 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~ 123 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|
T Consensus 5 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~W 37 (58)
T 1sem_A 5 VQALFDFNPQES-------------GELAFKRGDVITLINKDDPNW 37 (58)
T ss_dssp EEESSCBCCSST-------------TBCCBCTTCEEEEEECSSSSE
T ss_pred EEECcCCCCCCC-------------CCcCCCCCCEEEEEEecCCCE
Confidence 468888877632 358889999999866654555
No 58
>2daj_A KIAA0977 protein, COBL-like 1; ubiquitin-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.99 E-value=10 Score=28.60 Aligned_cols=25 Identities=28% Similarity=0.609 Sum_probs=22.1
Q ss_pred cchhhHHHHHHHhCceEEEeeeCCC
Q 029818 64 QDQLDVREILDKYGFKSVYAFSTGV 88 (187)
Q Consensus 64 qDqLev~~Il~k~gLKalfAf~p~~ 88 (187)
+..||+-.-|.+||++-|||.|...
T Consensus 60 ~e~LdLskSLndlgirELya~d~~~ 84 (91)
T 2daj_A 60 QEPLDLTKSLNDLGLRELYAMDVNR 84 (91)
T ss_dssp CCBCCTTSCHHHHTCSEEEEEECCC
T ss_pred Ccccchhcchhhhhhhhhheecccc
Confidence 5678999999999999999999874
No 59
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=33.93 E-value=85 Score=23.19 Aligned_cols=53 Identities=11% Similarity=0.199 Sum_probs=38.1
Q ss_pred ccccCCeEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 33 VKTKVPEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 33 ~~~~~peVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
......+..++.+..|.||.-||=-.++|....--.+-+.|.+ | =.+++||..
T Consensus 51 ~~~~~~~~~~~~~~~g~~p~vv~lhG~~~~~~~~~~~~~~L~~-~-~~v~~~D~~ 103 (314)
T 3kxp_A 51 RRVDIGRITLNVREKGSGPLMLFFHGITSNSAVFEPLMIRLSD-R-FTTIAVDQR 103 (314)
T ss_dssp EEEECSSCEEEEEEECCSSEEEEECCTTCCGGGGHHHHHTTTT-T-SEEEEECCT
T ss_pred eeEEECCEEEEEEecCCCCEEEEECCCCCCHHHHHHHHHHHHc-C-CeEEEEeCC
Confidence 3445678889989999999999988877766554444455555 4 578888875
No 60
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A
Probab=33.89 E-value=26 Score=22.86 Aligned_cols=34 Identities=21% Similarity=0.429 Sum_probs=24.5
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.++||.|+++.. .-|+|+.|++|.+-.+..+.|.
T Consensus 13 ~~alydy~~~~~-------------~eLsf~~Gd~i~v~~~~~~~Ww 46 (76)
T 2ed1_A 13 VKTIYDCQADND-------------DELTFIEGEVIIVTGEEDQEWW 46 (76)
T ss_dssp EEESSCCCCSSS-------------SBCCCCSSCEEEESSCCSSSEE
T ss_pred EEECccCCCCCc-------------CCcCcCCCCEEEEEEecCCCEE
Confidence 578888877632 2488999999999766555553
No 61
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Probab=33.68 E-value=18 Score=22.53 Aligned_cols=35 Identities=14% Similarity=0.371 Sum_probs=23.9
Q ss_pred CceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 77 GFKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 77 gLKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
-.+++|.|+++.. .-|+++.|++|.+-.+..+.|.
T Consensus 6 ~~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~W~ 40 (60)
T 1w70_A 6 RAEALFDFTGNSK-------------LELNFKAGDVIFLLSRINKDWL 40 (60)
T ss_dssp EEEESSCBCCSST-------------TBCCBCTTCEEEEEEECSSSEE
T ss_pred EEEECccCCcCCC-------------CCccCCCCCEEEEEEeCCCCeE
Confidence 3578888877532 2388899999998665545553
No 62
>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}
Probab=32.90 E-value=15 Score=22.54 Aligned_cols=34 Identities=15% Similarity=0.344 Sum_probs=23.3
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|.++.. .-|+++.|++|.+-.+..+.|.
T Consensus 4 ~~al~d~~~~~~-------------~eLs~~~Gd~i~v~~~~~~gW~ 37 (59)
T 1yn8_A 4 AVALYDFEPEND-------------NELRLAEGDIVFISYKHGQGWL 37 (59)
T ss_dssp EEECSCBCCCST-------------TBCCBCTTCEEEEEEEEETTEE
T ss_pred EEECccCCCCCC-------------CCcCCCCCCEEEEEEcCCCCeE
Confidence 467888876532 2478899999998766555453
No 63
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=32.74 E-value=37 Score=23.78 Aligned_cols=51 Identities=18% Similarity=0.344 Sum_probs=35.2
Q ss_pred ccCCeEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 35 TKVPEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 35 ~~~peVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
.+.....++.+..|.||.-||=-.++|....--.+-..|.+ |+ .+++||..
T Consensus 8 ~~~~~~~~~y~~~g~~~~vv~~HG~~~~~~~~~~~~~~L~~-~~-~vi~~d~~ 58 (278)
T 3oos_A 8 IKTPRGKFEYFLKGEGPPLCVTHLYSEYNDNGNTFANPFTD-HY-SVYLVNLK 58 (278)
T ss_dssp EEETTEEEEEEEECSSSEEEECCSSEECCTTCCTTTGGGGG-TS-EEEEECCT
T ss_pred EecCCceEEEEecCCCCeEEEEcCCCcchHHHHHHHHHhhc-Cc-eEEEEcCC
Confidence 34577889999999999999977777644443333445555 54 57788865
No 64
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=32.45 E-value=88 Score=22.87 Aligned_cols=45 Identities=13% Similarity=0.173 Sum_probs=31.8
Q ss_pred EEEecCCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC-Cc
Q 029818 44 LYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG-VG 89 (187)
Q Consensus 44 LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~-~g 89 (187)
+|..|.||.-||=-.++|...+--.+-+-|.+.|+ .++|+|.. +|
T Consensus 10 ~~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~g~-~vi~~D~~GhG 55 (247)
T 1tqh_A 10 FFFEAGERAVLLLHGFTGNSADVRMLGRFLESKGY-TCHAPIYKGHG 55 (247)
T ss_dssp EEECCSSCEEEEECCTTCCTHHHHHHHHHHHHTTC-EEEECCCTTSS
T ss_pred eeeCCCCcEEEEECCCCCChHHHHHHHHHHHHCCC-EEEecccCCCC
Confidence 45557788888877788776655556677777777 56888865 44
No 65
>2qpz_A Naphthalene 1,2-dioxygenase system ferredoxin subunit; rieske ferredoxin, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport, iron; 1.85A {Pseudomonas putida}
Probab=32.33 E-value=54 Score=22.27 Aligned_cols=41 Identities=7% Similarity=-0.040 Sum_probs=28.2
Q ss_pred EEEeeeCC-CccccceeecC-CCCcccccccCCcEEEe-CCCcCC
Q 029818 80 SVYAFSTG-VGRGVPIRFNR-RNGRSMLGYKDGSVVYM-DGEPQD 121 (187)
Q Consensus 80 alfAf~p~-~gRGv~irfnP-rnG~SlL~Y~dgsvI~l-DGEPKd 121 (187)
.+|||+.. .-||.++-.+. .++.-.-|| +|+..-+ ||+...
T Consensus 36 ~~~A~~~~CpH~g~~L~~g~~~~~~i~Cp~-Hg~~Fd~~~G~~~~ 79 (103)
T 2qpz_A 36 EIYATDNLCTHGSARMSDGYLEGREIECPL-HQGRFDVCTGKALC 79 (103)
T ss_dssp EEEEEESBCSSSSCBGGGSEEETTEEECTT-TTCEEETTTCCEEE
T ss_pred EEEEECCcCCCCCCCCCCCeEeCCEEECCC-CCCEEeCCCCCEeC
Confidence 69999988 55888876554 234444555 5888888 887643
No 66
>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.27 E-value=25 Score=22.48 Aligned_cols=34 Identities=15% Similarity=0.304 Sum_probs=24.0
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.++||.|+++.. .-|+++.|++|.+-.+..+-|.
T Consensus 10 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~Ww 43 (68)
T 2dmo_A 10 HRVLFGFVPETK-------------EELQVMPGNIVFVLKKGNDNWA 43 (68)
T ss_dssp EEECSSCCCCSS-------------SSCCCCTTCEEEECEECSSSCE
T ss_pred EEECcCCCcCCc-------------CCCCCCCCCEEEEEEeCCCCEE
Confidence 578888876532 2488999999999765555554
No 67
>1vry_A Glycine receptor alpha-1 chain; second transmembrane domain, third transmembrane domain, membrane protein; NMR {Homo sapiens} SCOP: j.35.1.1
Probab=32.11 E-value=26 Score=24.96 Aligned_cols=12 Identities=33% Similarity=1.184 Sum_probs=10.3
Q ss_pred hhhhheeeeeeh
Q 029818 165 WVIACVVIVFTR 176 (187)
Q Consensus 165 Wilac~VIvf~R 176 (187)
|+++|++.||.-
T Consensus 38 w~~~C~~FVF~a 49 (76)
T 1vry_A 38 WLAVCLLFVFSA 49 (76)
T ss_dssp THHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998863
No 68
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}
Probab=31.90 E-value=20 Score=22.88 Aligned_cols=35 Identities=9% Similarity=0.151 Sum_probs=23.1
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSM 123 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~ 123 (187)
.++||.|.++. ++ -.-|+++.|++|.+-.+..+.|
T Consensus 9 ~~alydy~~~~-------~~----~~eLs~~~Gd~i~v~~~~~~gW 43 (67)
T 2eyx_A 9 ARVIQKRVPNA-------YD----KTALALEVGELVKVTKINVSGQ 43 (67)
T ss_dssp EEECCCBCCCT-------TC----SSBCCBCSSEEEEEEEECTTSE
T ss_pred EEEeEEECCCC-------CC----CCccccCCCCEEEEEEecCCCE
Confidence 57888887751 11 1268889999998865544445
No 69
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A
Probab=31.82 E-value=24 Score=21.58 Aligned_cols=33 Identities=24% Similarity=0.398 Sum_probs=22.8
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSM 123 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~ 123 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|
T Consensus 4 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~W 36 (58)
T 1uti_A 4 ARALYDFEALEE-------------DELGFRSGEVVEVLDSSNPSW 36 (58)
T ss_dssp EEESSCBCCCST-------------TBCCBCTTCEEEEEECCSSSE
T ss_pred EEECccCCCCCc-------------CCCCCCCCCEEEEEEECCCCE
Confidence 367888876532 358889999999865544445
No 70
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=31.74 E-value=25 Score=21.44 Aligned_cols=33 Identities=12% Similarity=0.393 Sum_probs=22.9
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSM 123 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~ 123 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|
T Consensus 5 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~W 37 (58)
T 2vwf_A 5 VQALFDFDPQED-------------GELGFRRGDFIHVMDNSDPNW 37 (58)
T ss_dssp EEESSCBCCCST-------------TBCCBCTTCEEEEEECCSSSE
T ss_pred EEECceECCCCc-------------CCcCCCCCCEEEEEEcCCCCE
Confidence 467788876532 258889999999866544545
No 71
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Probab=31.50 E-value=19 Score=22.98 Aligned_cols=33 Identities=3% Similarity=0.176 Sum_probs=22.8
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSM 123 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~ 123 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|
T Consensus 10 ~~Alydy~~~~~-------------~eLsf~~Gd~i~v~~~~~~~W 42 (68)
T 1tg0_A 10 VVAQFPYKSDYE-------------DDLNFEKDQEIIVTSVEDAEW 42 (68)
T ss_dssp EEESSCBCCSCT-------------TBCCBCTTCEEEEEEECSSSE
T ss_pred EEECeeECcCCc-------------CCCCCCCCCEEEEEEecCCCe
Confidence 578888877532 248889999999865544444
No 72
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Probab=31.34 E-value=25 Score=21.56 Aligned_cols=33 Identities=9% Similarity=0.118 Sum_probs=23.1
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSM 123 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~ 123 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|
T Consensus 3 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~W 35 (58)
T 1jo8_A 3 ATAEYDYDAAED-------------NELTFVENDKIINIEFVDDDW 35 (58)
T ss_dssp EEESSCBCCCST-------------TBCCBCTTCEEEEEECCSSSE
T ss_pred EEECceECCCCC-------------CCcccCCCCEEEEEEecCCCc
Confidence 467888877632 248889999999866554555
No 73
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=31.30 E-value=89 Score=22.05 Aligned_cols=50 Identities=12% Similarity=0.042 Sum_probs=37.7
Q ss_pred cCCeEEEEEEEecC--CceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 36 KVPEVEIHLYRRGE--GPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 36 ~~peVEV~LyrrGk--GPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
++.++.++.+..|. ||.-||=-.++|....--.+-.-|.+. -.+++||..
T Consensus 5 ~~~g~~l~~~~~g~~~~~~vv~lHG~~~~~~~~~~~~~~L~~~--~~v~~~D~~ 56 (264)
T 3ibt_A 5 NVNGTLMTYSESGDPHAPTLFLLSGWCQDHRLFKNLAPLLARD--FHVICPDWR 56 (264)
T ss_dssp EETTEECCEEEESCSSSCEEEEECCTTCCGGGGTTHHHHHTTT--SEEEEECCT
T ss_pred eeCCeEEEEEEeCCCCCCeEEEEcCCCCcHhHHHHHHHHHHhc--CcEEEEccc
Confidence 34677888888898 999999888887766655666666554 478899875
No 74
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}
Probab=31.27 E-value=23 Score=21.77 Aligned_cols=34 Identities=18% Similarity=0.533 Sum_probs=23.7
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|.
T Consensus 6 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~Ww 39 (58)
T 1zlm_A 6 FRALYTFEPRTP-------------DELYFEEGDIIYITDMSDTNWW 39 (58)
T ss_dssp EEESSCBCCSST-------------TBCCBCTTCEEEEEECCSSSEE
T ss_pred EEECccCCCCCC-------------CCccCCCCCEEEEEEeCCCCEE
Confidence 467888876532 3588899999998666555553
No 75
>3py9_A Protein kinase; pasta, muropeptide binding, phosphorylation, membran transferase; 2.20A {Staphylococcus aureus subsp} PDB: 3m9g_A
Probab=31.24 E-value=92 Score=25.69 Aligned_cols=53 Identities=17% Similarity=0.297 Sum_probs=41.7
Q ss_pred CcCCcccchhhHHHHHHHhCceE---EEeeeCCCccccceeecCCCCcccccccCCcEEEe
Q 029818 58 SLVGWDQDQLDVREILDKYGFKS---VYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYM 115 (187)
Q Consensus 58 ~LgG~eqDqLev~~Il~k~gLKa---lfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~l 115 (187)
++-|.+.+ |.+..|++.||+. -..||.+-..|.=|.-+|..|..+ ..|+.|.|
T Consensus 11 dv~G~t~~--eA~~~L~~~gl~~~~~~~~~s~~~~~g~Vi~q~P~aG~~v---~~g~~V~l 66 (294)
T 3py9_A 11 DVIGKSVK--EAEQIFNKNNLKLGKISRSYSDKYPENEIIKTTPNTGERV---ERGDSVDV 66 (294)
T ss_dssp CCTTCCHH--HHHHHHHHTTCEEEEEEEECCSSSCSSSEEEEESCTTCCC---CTTCEEEE
T ss_pred CcCCCCHH--HHHHHHHHCCCeEEeeEEEeCCCCCCCEEEEEcCCCCCEe---CCCCEEEE
Confidence 45666655 5789999999985 367888878899999999999876 45777765
No 76
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A
Probab=31.12 E-value=21 Score=21.60 Aligned_cols=33 Identities=18% Similarity=0.126 Sum_probs=21.2
Q ss_pred eEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 79 KSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 79 KalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
+++|.|+++.. .-|+++.|++|.+-....+.|.
T Consensus 5 ~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~W~ 37 (58)
T 4e6r_A 5 FVXFAYVAERE-------------DELSLVXGSRVTVMEXCSDGWW 37 (58)
T ss_dssp EECSCBCCCST-------------TBCCBCTTCEEEEEEECTTSEE
T ss_pred EECccCCCCCC-------------CEeeEeCCCEEEEeEcCCCCEE
Confidence 56777766532 2378899999988655444453
No 77
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Probab=31.11 E-value=27 Score=22.46 Aligned_cols=34 Identities=18% Similarity=0.371 Sum_probs=24.1
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|.
T Consensus 4 ~~alydy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~Ww 37 (65)
T 2nwm_A 4 ARLKFDFQAQSP-------------KELTLQKGDIVYIHKEVDKNWL 37 (65)
T ss_dssp EEECSCBCCCST-------------TBCCBCTTCEEEEEECCTTTCE
T ss_pred EEEeeeECCCCc-------------CccCCcCCCEEEEEEecCCCEE
Confidence 367888876532 2578899999999766556664
No 78
>3t30_B Nucleoplasmin-2; beta-barrel jelly roll topology, histone chaperone, H2A-H2B H3-H4 tetramer, oocytes and early embryos, chaperone; 1.90A {Homo sapiens} SCOP: b.121.3.0
Probab=31.05 E-value=31 Score=26.07 Aligned_cols=17 Identities=41% Similarity=0.813 Sum_probs=13.3
Q ss_pred CeEEEEEEEecCCceeEe
Q 029818 38 PEVEIHLYRRGEGPIAVF 55 (187)
Q Consensus 38 peVEV~LyrrGkGPvavF 55 (187)
|-|..+| ++|.||||+-
T Consensus 88 pPVtf~L-~~GSGPV~is 104 (110)
T 3t30_B 88 PPVTFQL-RAGSGPVFLS 104 (110)
T ss_dssp SSEEEEE-EESCCCEEEE
T ss_pred CCEEEEE-EecCCCEEee
Confidence 6677776 5999999973
No 79
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}
Probab=30.70 E-value=20 Score=23.28 Aligned_cols=34 Identities=18% Similarity=0.505 Sum_probs=23.6
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|.
T Consensus 6 ~~Alydy~~~~~-------------~eLsf~~Gd~i~v~~~~~~~Ww 39 (68)
T 2ew3_A 6 CRGLYDFEPENQ-------------GELGFKEGDIITLTNQIDENWY 39 (68)
T ss_dssp EEESSCBCCCST-------------TBCCBCTTCEEEEEEESSSSEE
T ss_pred EEEeeeECCCCC-------------CccCCCCCCEEEEEEecCCCEE
Confidence 467888876532 2488899999998665545553
No 80
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A
Probab=30.49 E-value=22 Score=22.52 Aligned_cols=33 Identities=6% Similarity=0.218 Sum_probs=22.8
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSM 123 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~ 123 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|
T Consensus 9 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~W 41 (67)
T 2o9s_A 9 AIAKFNFNGDTQ-------------VEMSFRKGERITLLRQVDENW 41 (67)
T ss_dssp EEECSCBCCSST-------------TBCCBCTTCEEEEEEECSSSE
T ss_pred EEECccCCcCCc-------------CccCCCCCCEEEEEEecCCCE
Confidence 577888876532 247889999999866544445
No 81
>3g2b_A Coenzyme PQQ synthesis protein D; helix-turn-helix, PQQ biosynthesis, biosynthetic protein; 1.66A {Xanthomonas campestris PV}
Probab=30.43 E-value=14 Score=26.43 Aligned_cols=31 Identities=23% Similarity=0.333 Sum_probs=24.3
Q ss_pred CCCccccceeecCCCCcccccccCCcEEEeCC
Q 029818 86 TGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDG 117 (187)
Q Consensus 86 p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDG 117 (187)
|...||++.+|+|..|..+|=|-.| .|.||+
T Consensus 13 p~l~~~~rl~~d~~~~~~VlL~peg-~i~Ln~ 43 (95)
T 3g2b_A 13 PALRAGVRLQHDRARDQWVLLAPER-VVELDD 43 (95)
T ss_dssp CCCCTTCEEEEEGGGTEEEEECCCC-CCCCCT
T ss_pred ceeCCCeEEEEeccCCcEEEECCCc-eeecCH
Confidence 4466999999999999999888766 455553
No 82
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=30.13 E-value=27 Score=21.80 Aligned_cols=34 Identities=15% Similarity=0.351 Sum_probs=23.5
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|.
T Consensus 8 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~Ww 41 (62)
T 1uj0_A 8 VRALYDFEAVED-------------NELTFKHGELITVLDDSDANWW 41 (62)
T ss_dssp EEESSCBCCCST-------------TBCCBCTTCEEEEEECCSSSEE
T ss_pred EEECccCCCCCc-------------CCcCCCCCCEEEEEEeCCCCEE
Confidence 467788876532 2488899999998766555553
No 83
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=30.04 E-value=27 Score=21.61 Aligned_cols=34 Identities=9% Similarity=0.202 Sum_probs=23.7
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|.
T Consensus 4 ~~alydy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~Ww 37 (65)
T 2oaw_A 4 VLALYDYQEKSP-------------REVTMKKGDILTLLNSTNKDWW 37 (65)
T ss_dssp EEECSCBCCSST-------------TBCCBCTTCEEEEEECCSSSEE
T ss_pred EEEcccCCccCC-------------CCCCCCCCCEEEEEEcCCCCEE
Confidence 468888877532 2478899999998665555553
No 84
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}
Probab=29.83 E-value=18 Score=23.99 Aligned_cols=34 Identities=12% Similarity=0.285 Sum_probs=22.9
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCC-cc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDS-MI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS-~~ 124 (187)
.++||.|+++. -.-|+|+.|++|.+-.+..+. |.
T Consensus 13 ~~alydy~~~~-------------~~eLsf~~Gd~i~v~~~~~~~gWw 47 (80)
T 2i0n_A 13 ARALKDYNVSD-------------TSLLPFKRNDIITITFKDQENKWF 47 (80)
T ss_dssp EEESSCBCCCS-------------SSSCCBCSSEEEEEEEESSSSSEE
T ss_pred EEECCCCCcCC-------------CCCcCCCCCCEEEEEEecCCCCEE
Confidence 46777777652 234888999999986554454 53
No 85
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A
Probab=29.46 E-value=25 Score=22.21 Aligned_cols=34 Identities=15% Similarity=0.291 Sum_probs=22.9
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|.
T Consensus 10 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~W~ 43 (68)
T 2dl3_A 10 ARAKFDFKAQTL-------------KELPLQKGDIVYIYKQIDQNWY 43 (68)
T ss_dssp EEESSCBCCSST-------------TBCCBCTTCEEEEEECCSTTEE
T ss_pred EEECccCCCCCc-------------CCccCCCCCEEEEeEecCCCEE
Confidence 467777776532 2488899999998665445453
No 86
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.22 E-value=29 Score=22.37 Aligned_cols=34 Identities=15% Similarity=0.436 Sum_probs=23.3
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCC---cCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGE---PQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGE---PKdS~~ 124 (187)
.+++|.|+++.. .-|+|+.|++|.+-.+ ..+.|.
T Consensus 11 ~~alydy~~~~~-------------~eLsf~~Gd~i~v~~~~~~~~~~Ww 47 (73)
T 2dl7_A 11 VKALYDYEGQTD-------------DELSFPEGAIIRILNKENQDDDGFW 47 (73)
T ss_dssp EEESSCBCCSST-------------TBCCBCTTCEEEEEECCCSSSSSCE
T ss_pred EEECccCCcCCC-------------CcCCCCCCCEEEEEECCCCCCCCcE
Confidence 577888877632 2388999999998655 245554
No 87
>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.13 E-value=35 Score=22.97 Aligned_cols=34 Identities=12% Similarity=0.290 Sum_probs=24.3
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.++||.|.++. -.-|+|+.|++|.+-.+..+-|.
T Consensus 20 ~~alydy~~~~-------------~~eLsf~~Gd~i~v~~~~~~~Ww 53 (90)
T 2yup_A 20 AVAQYTFKGDL-------------EVELSFRKGEHICLIRKVNENWY 53 (90)
T ss_dssp EEECSCCCCCS-------------SSBCCCCTTCEEEESSCCCSSEE
T ss_pred EEEeecCCcCC-------------cCcCCCCCCCEEEEEEEcCCCeE
Confidence 57888887652 22488999999998776555564
No 88
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A
Probab=28.95 E-value=30 Score=21.50 Aligned_cols=34 Identities=6% Similarity=0.121 Sum_probs=22.7
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|+++. -.-|+++.|++|.+-....+.|.
T Consensus 12 ~~al~dy~~~~-------------~~eLs~~~Gd~i~v~~~~~~~Ww 45 (65)
T 3ulr_B 12 AIALYDYQAAG-------------DDEISFDPDDIITNIEMIDDGWW 45 (65)
T ss_dssp EEECSCBCCCS-------------TTBCCBCTTCEEEEEECCSSSEE
T ss_pred EEEEeeECCCC-------------cCEeeEecCCEEEEEEecCCCEE
Confidence 46777776652 22488999999988655545554
No 89
>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=28.75 E-value=36 Score=21.56 Aligned_cols=34 Identities=12% Similarity=0.238 Sum_probs=24.2
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|.
T Consensus 10 ~~alydy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~Ww 43 (69)
T 2eqi_A 10 VKALYDYKAKRS-------------DELTFCRGALIHNVSKEPGGWW 43 (69)
T ss_dssp EEESSCBCCCSS-------------SCCCBCTTCEEESCCCCSSSCE
T ss_pred EEECeeECCCCc-------------CccCCCCCCEEEEEEcCCCCeE
Confidence 568888877632 2488899999998766555564
No 90
>1umu_A UMUD'; induced mutagenesis, SOS mutagenesis, DNA repair, beta- lactamase cleavage reaction, LEXA repressor, lambda CI; 2.50A {Escherichia coli} SCOP: b.87.1.1 PDB: 1i4v_A 1ay9_A
Probab=28.53 E-value=27 Score=24.39 Aligned_cols=48 Identities=21% Similarity=0.421 Sum_probs=29.4
Q ss_pred cCcCCcccchhhHHHHHHHhCceEEEeeeCCCccccceeecCCCCccccc--ccCCcEEEeCCC
Q 029818 57 SSLVGWDQDQLDVREILDKYGFKSVYAFSTGVGRGVPIRFNRRNGRSMLG--YKDGSVVYMDGE 118 (187)
Q Consensus 57 s~LgG~eqDqLev~~Il~k~gLKalfAf~p~~gRGv~irfnPrnG~SlL~--Y~dgsvI~lDGE 118 (187)
|+-..+..+.+++...+-.+ -+..|++. -.|-||.| +.+|+++.+|-.
T Consensus 4 ~~a~~~~~~~i~l~~~~~~~-~~~~~~~~-------------v~GdSM~p~~i~~Gd~v~vd~~ 53 (116)
T 1umu_A 4 SPAADYVEQRIDLNQLLIQH-PSATYFVK-------------ASGDSMIDGGISDGDLLIVDSA 53 (116)
T ss_dssp ----CCCCCCCCHHHHHCSC-GGGEEEEE-------------CCSSTTGGGTCCTTCEEEEETT
T ss_pred ccccccccceEeccHHhccC-CCCEEEEE-------------ECCCCcCCCCCCCCCEEEEEcC
Confidence 34445666778877665321 13344443 46899998 889999999854
No 91
>2vyo_A ECU11_0510, chitooligosaccharide deacetylase; CE4 esterase, native protein, microsporidian, chitin deacetylase, hydrolase, inactive; 1.50A {Encephalitozoon cuniculi}
Probab=28.45 E-value=34 Score=27.30 Aligned_cols=25 Identities=24% Similarity=0.396 Sum_probs=18.7
Q ss_pred CCcccchh-hHHHHHHHhCceEEEee
Q 029818 60 VGWDQDQL-DVREILDKYGFKSVYAF 84 (187)
Q Consensus 60 gG~eqDqL-ev~~Il~k~gLKalfAf 84 (187)
.||+.+.. .+-+||++||+|+-|+|
T Consensus 34 DG~~~~~t~~il~iL~~~~v~ATF~F 59 (254)
T 2vyo_A 34 DGPVRGVTDRILNTLDELGVKATFSF 59 (254)
T ss_dssp SCCCTTHHHHHHHHHHHHTCCCEEEE
T ss_pred CCCCcccHHHHHHHHHHcCCCEEEEE
Confidence 36654433 57899999999999944
No 92
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1
Probab=28.39 E-value=27 Score=22.36 Aligned_cols=34 Identities=15% Similarity=0.447 Sum_probs=23.4
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|.
T Consensus 6 ~~Alydy~~~~~-------------~eLsf~~Gd~i~v~~~~~~~Ww 39 (65)
T 1b07_A 6 VRALFDFNGNDE-------------EDLPFKKGDILRIRDKPEEQWW 39 (65)
T ss_dssp EEESSCBCCSST-------------TBCCBCTTCEEEEEECSSSSEE
T ss_pred EEECCcCCCCCC-------------CccCCcCCCEEEEEEecCCCeE
Confidence 478888877632 2478999999988655445553
No 93
>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=28.24 E-value=15 Score=23.49 Aligned_cols=32 Identities=13% Similarity=0.429 Sum_probs=22.3
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSM 123 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~ 123 (187)
.+++|.|+++.. .-|+++.|++|.+ .+..+.|
T Consensus 13 ~~alydy~~~~~-------------~eLs~~~Gd~i~v-~~~~~~W 44 (72)
T 2kgt_A 13 YVGLWDFKSRTD-------------EELSFRAGDVFHV-ARKEEQW 44 (72)
T ss_dssp EECCTTCBCSST-------------TSCBCCTTCCEEE-EEECSSC
T ss_pred EEEcccCCCCCc-------------CCcCCCCCCEEEE-eeCCCCE
Confidence 467788876532 2478899999999 5545555
No 94
>2wwb_C SEC61BETA, protein transport protein SEC61 subunit beta; ribosome, protein EXIT tunnel, cotranslational protein translocation, protein conducting channel; 6.48A {Canis lupus familiaris}
Probab=27.76 E-value=46 Score=25.02 Aligned_cols=34 Identities=18% Similarity=0.332 Sum_probs=21.7
Q ss_pred CcEEEeCCCcCCCccchhhHHHHHHHHHHHHHHH
Q 029818 110 GSVVYMDGEPQDSMIKPVTKILFGLTVITLLITL 143 (187)
Q Consensus 110 gsvI~lDGEPKdS~~KPvtri~~gva~vtlmi~~ 143 (187)
|-+=|||.|-..--+.|.+.++++++.+.+++++
T Consensus 54 GllRfY~dds~GlKV~P~~VLv~sl~Fi~~Vi~L 87 (96)
T 2wwb_C 54 GMWRFYTEDSPGLKVGPVPVLVMSLLFIASVFML 87 (96)
T ss_dssp -------CCSCCCCCSSCSHHHHHHHHHHHHHHH
T ss_pred ceeeeeecCCCceEECCEEehhhHHHHHHHHHHH
Confidence 4455677666555689999999999998887754
No 95
>2cc1_A Beta-lactamase, penicillinase; hydrolase, antibiotic resistance, broad-spectrum; 2.13A {Mycobacterium fortuitum} SCOP: e.3.1.1
Probab=27.65 E-value=1.4e+02 Score=22.33 Aligned_cols=24 Identities=21% Similarity=0.303 Sum_probs=16.3
Q ss_pred hHHHHHHHhCce-EEEeeeCCCccc
Q 029818 68 DVREILDKYGFK-SVYAFSTGVGRG 91 (187)
Q Consensus 68 ev~~Il~k~gLK-alfAf~p~~gRG 91 (187)
+++.++++++-+ +++..|+..|+-
T Consensus 6 ~l~~~~~~~~~~~~~~v~d~~tg~~ 30 (262)
T 2cc1_A 6 QLAELERRDNVLIGLYAANLQSGRR 30 (262)
T ss_dssp HHHHHHHHHTEEEEEEEEETTTCCE
T ss_pred HHHHHHHhcCCeEEEEEEECCCCCe
Confidence 578899998765 455666665543
No 96
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}
Probab=27.64 E-value=22 Score=23.44 Aligned_cols=34 Identities=15% Similarity=0.344 Sum_probs=23.3
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|.
T Consensus 8 ~~Alydy~a~~~-------------~eLs~~~Gd~i~v~~~~~~gWw 41 (73)
T 2lcs_A 8 AVALYDFEPEND-------------NELRLAEGDIVFISYKHGQGWL 41 (73)
T ss_dssp EEESSCBCCSST-------------TBCCBCTTCEEEEEEEETTTEE
T ss_pred EEECccCCCCCC-------------CccCCcCCCEEEEEEEcCCCEE
Confidence 467888876532 2478899999998666555453
No 97
>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A
Probab=27.63 E-value=32 Score=22.17 Aligned_cols=34 Identities=18% Similarity=0.514 Sum_probs=24.1
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|.
T Consensus 10 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~Ww 43 (73)
T 2dbm_A 10 CRALYDFEPENE-------------GELGFKEGDIITLTNQIDENWY 43 (73)
T ss_dssp EEESSCBCCCST-------------TCCCBCTTCEEECCBCSSSSEE
T ss_pred EEEccccCCCCC-------------CCccCCCCCEEEEEEecCCCEE
Confidence 567888876532 3588899999998776555554
No 98
>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}
Probab=27.61 E-value=36 Score=23.66 Aligned_cols=35 Identities=14% Similarity=0.277 Sum_probs=25.6
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCccc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMIK 125 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~K 125 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|.+
T Consensus 21 ~~Alydy~a~~~-------------~eLsf~~Gd~i~V~~~~~~gWw~ 55 (92)
T 2o2o_A 21 CQVAFSYLPQND-------------DELELKVGDIIEVVGEVEEGWWE 55 (92)
T ss_dssp EEECSCBCCCSS-------------SCCCBCSSCEEECCCGGGSSCBC
T ss_pred EEEccccCCCCC-------------ccccccCCCEEEEeEecCCCEEE
Confidence 577888877532 35889999999998776666654
No 99
>2kud_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=27.57 E-value=45 Score=24.06 Aligned_cols=53 Identities=17% Similarity=0.189 Sum_probs=38.8
Q ss_pred CcCCcccchhhHHHHHHHhCceE--EEeeeCCCccccceeecCCCCcccccccCCcEEEe
Q 029818 58 SLVGWDQDQLDVREILDKYGFKS--VYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYM 115 (187)
Q Consensus 58 ~LgG~eqDqLev~~Il~k~gLKa--lfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~l 115 (187)
++.|.+.+ |.+.+|++.||+. ...|+.+...|.-|.-+|..|..+- .|+.|.|
T Consensus 13 dv~G~~~~--~A~~~L~~~gl~~~~~~~~~~~~~~g~Vi~q~P~~G~~v~---~g~~V~l 67 (140)
T 2kud_A 13 DVRGQSSA--DAIATLQNRGFKIRTLQKPDSTIPPDHVIGTDPAANTSVS---AGDEITV 67 (140)
T ss_dssp CCTTSBHH--HHHHHHHHHTCEEEEEEEEESSCCCSBCSCCCHHHHSCEE---TTCEEEE
T ss_pred ccCCCCHH--HHHHHHHHCCCeEeeEEeeCCCCCCCEEEEEcCCCCCCcC---CCCEEEE
Confidence 45665554 6889999999985 4567777778988999998887653 3666544
No 100
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=27.37 E-value=24 Score=22.74 Aligned_cols=34 Identities=9% Similarity=0.320 Sum_probs=23.6
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|.
T Consensus 10 ~~alydy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~Ww 43 (77)
T 2d8j_A 10 FVALFDYQARTA-------------EDLSFRAGDKLQVLDTSHEGWW 43 (77)
T ss_dssp EEESSCBCCSSS-------------SBCCBCTTCCEEEEECCSSSEE
T ss_pred EEEccCCCCCCC-------------CccCCCCCCEEEEEECCCCCeE
Confidence 578888877632 2478889999998766555553
No 101
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*
Probab=27.23 E-value=28 Score=22.18 Aligned_cols=34 Identities=12% Similarity=0.265 Sum_probs=22.8
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|.
T Consensus 18 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~Ww 51 (73)
T 3h0h_A 18 FVALYDYEAITE-------------DDLSFHKGEKFQILNSSEGDWW 51 (73)
T ss_dssp EEESSCBCCSST-------------TBCCBCTTCEEEEEECSSSSEE
T ss_pred EEECccCCCCCC-------------CcceEeCCCEEEEEEecCCCeE
Confidence 578888877632 2578888999887554444453
No 102
>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}
Probab=26.89 E-value=25 Score=22.18 Aligned_cols=34 Identities=15% Similarity=0.218 Sum_probs=22.8
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|+++. -.-|+++.|++|.+-....+.|.
T Consensus 16 ~~al~dy~~~~-------------~~eLs~~~Gd~i~v~~~~~~~W~ 49 (72)
T 4glm_A 16 GVALYRFQALE-------------PNELDFEVGDKIRILATLEDGWL 49 (72)
T ss_dssp EEESSCBCCCS-------------TTBCCBCTTCEEEEEEECSTTEE
T ss_pred EEECccCCCCC-------------CCcCCCCCCCEEEEEEccCCCEE
Confidence 56777776652 22488899999988665445554
No 103
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}
Probab=26.67 E-value=21 Score=22.21 Aligned_cols=33 Identities=9% Similarity=0.229 Sum_probs=22.7
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSM 123 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~ 123 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|
T Consensus 9 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~W 41 (60)
T 2gnc_A 9 AIAKFDYVGRSA-------------RELSFKKGASLLLYHRASEDW 41 (60)
T ss_dssp EEESSCBCCSST-------------TBCCBCTTCEEEEEEEEETTE
T ss_pred EEECCCCCcCCc-------------CCcCCCCCCEEEEEEecCCCE
Confidence 467888876532 248889999998866544445
No 104
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=26.46 E-value=39 Score=30.65 Aligned_cols=41 Identities=17% Similarity=0.241 Sum_probs=34.5
Q ss_pred CCceeEeecC----cCCcccchhhHHHHHHHhCceEEEeeeCCCc
Q 029818 49 EGPIAVFKSS----LVGWDQDQLDVREILDKYGFKSVYAFSTGVG 89 (187)
Q Consensus 49 kGPvavFKs~----LgG~eqDqLev~~Il~k~gLKalfAf~p~~g 89 (187)
.|||.++.-+ +..|...--|+|.++++-|-+.|+||-....
T Consensus 155 ~G~v~~l~~~~~~~~~~~~~tP~e~r~~f~~~gw~~v~afqtrnP 199 (511)
T 1g8f_A 155 GGSLEAIQLPQHYDYPGLRKTPAQLRLEFQSRQWDRVVAFQTRNP 199 (511)
T ss_dssp EEEEEESCCCCCCSCTTTCCCHHHHHHHHHHTTCCCEEEEEESSC
T ss_pred EEEEEEEecCCcCCchhhcCCHHHHHHHHHHcCCCcEEEEecCCC
Confidence 4888888654 7788889999999999999999999976643
No 105
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=26.13 E-value=27 Score=23.01 Aligned_cols=35 Identities=17% Similarity=0.391 Sum_probs=24.9
Q ss_pred CceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 77 GFKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 77 gLKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
-.+|||.|+++.. .=|+++.|++|.+-....+.|.
T Consensus 8 ~~~Alydy~a~~~-------------~ELs~~~Gd~i~v~~~~~~gWw 42 (65)
T 2lj0_A 8 SYQALYSYIPQND-------------DELELRDGDIVDVMEKCDDGWF 42 (65)
T ss_dssp EEEESSCBCCSST-------------TBCCBCTTCEEEEEEECTTSEE
T ss_pred EEEEceeECCCCc-------------CCcCCCCCCEEEEeEeCCCCEE
Confidence 3589999988632 2488999999988655555553
No 106
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=25.95 E-value=36 Score=21.07 Aligned_cols=34 Identities=6% Similarity=0.196 Sum_probs=23.4
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|.
T Consensus 6 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~W~ 39 (61)
T 1y0m_A 6 VKALFDYKAQRE-------------DELTFTKSAIIQNVEKQDGGWW 39 (61)
T ss_dssp EEESSCBCCCST-------------TBCCBCTTCEEEEEECCSSSEE
T ss_pred EEECcCCCcCCC-------------CCcCCcCCCEEEEEEecCCCEE
Confidence 567888876532 2578899999998665555553
No 107
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=25.87 E-value=1.6e+02 Score=20.14 Aligned_cols=42 Identities=19% Similarity=0.180 Sum_probs=32.2
Q ss_pred EEecCCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 45 YRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 45 yrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
+..|.+|.-||=-.++|...+-..+-..|.++|+. ++++|..
T Consensus 17 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~-v~~~d~~ 58 (251)
T 3dkr_A 17 EYEGTDTGVVLLHAYTGSPNDMNFMARALQRSGYG-VYVPLFS 58 (251)
T ss_dssp EECCSSEEEEEECCTTCCGGGGHHHHHHHHHTTCE-EEECCCT
T ss_pred ccCCCCceEEEeCCCCCCHHHHHHHHHHHHHCCCE-EEecCCC
Confidence 44678888888878888777777778888888885 6777764
No 108
>2hi2_A Fimbrial protein; type IV pilin, fiber-forming protein, membrane protein, DNA protein, contractIle protein, cell adhesion; HET: MEA GLA DT6 HTO; 2.30A {Neisseria gonorrhoeae} PDB: 2hil_A* 1ay2_A* 2pil_A*
Probab=25.84 E-value=39 Score=24.87 Aligned_cols=27 Identities=4% Similarity=0.325 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHhcCChhHHHhcc
Q 029818 130 ILFGLTVITLLITLLFKDRPEWINKLN 156 (187)
Q Consensus 130 i~~gva~vtlmi~~~~k~~Pew~k~~~ 156 (187)
+++.++++++|++++++....++.+.+
T Consensus 6 l~vvi~ii~il~~~~~p~~~~~~~~~~ 32 (158)
T 2hi2_A 6 LMIVIAIVGILAAVALPAYQDYTARAQ 32 (158)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 678889999999999988777766544
No 109
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A
Probab=25.83 E-value=43 Score=21.86 Aligned_cols=36 Identities=14% Similarity=0.194 Sum_probs=23.6
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.++||.|+++ ...-.-|+++.|++|.+-.+..+.|.
T Consensus 12 ~~alydy~~~-----------~~~~~eLs~~~Gd~i~v~~~~~~gWw 47 (73)
T 2ebp_A 12 ARVHTDFTPS-----------PYDTDSLKLKKGDIIDIISKPPMGTW 47 (73)
T ss_dssp EEECSCBCCC-----------TTCCSBCCBCSSCEEEEEECCSSSCE
T ss_pred EEEeeccCCC-----------CCCCCccCCCCCCEEEEEEeCCCCeE
Confidence 4778888764 11224578899999988665555553
No 110
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A
Probab=25.75 E-value=31 Score=21.54 Aligned_cols=33 Identities=9% Similarity=0.193 Sum_probs=22.6
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCC-cCCCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGE-PQDSM 123 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGE-PKdS~ 123 (187)
.+++|.|+++.. .-|+++.|++|.+-.+ ..+-|
T Consensus 4 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~~W 37 (62)
T 2j6f_A 4 YIVEYDYDAVHD-------------DELTIRVGEIIRNVKKLQEEGW 37 (62)
T ss_dssp EEECSCBCCSST-------------TBCCBCTTCEEEEEEECSSTTE
T ss_pred EEECccCCcCCc-------------CCcCCcCCCEEEEEEecCCCCE
Confidence 578888877522 2488899999988655 44445
No 111
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=25.74 E-value=1.8e+02 Score=20.69 Aligned_cols=52 Identities=10% Similarity=0.087 Sum_probs=38.8
Q ss_pred ccCCeEEEEEEEe----cCCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 35 TKVPEVEIHLYRR----GEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 35 ~~~peVEV~Lyrr----GkGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
+..-.+.++.+.. +.+|.-||=-.++|....-..+-.-|.++|+. +++||..
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~-v~~~d~~ 82 (315)
T 4f0j_A 27 SQGQPLSMAYLDVAPKKANGRTILLMHGKNFCAGTWERTIDVLADAGYR-VIAVDQV 82 (315)
T ss_dssp ETTEEEEEEEEEECCSSCCSCEEEEECCTTCCGGGGHHHHHHHHHTTCE-EEEECCT
T ss_pred cCCCCeeEEEeecCCCCCCCCeEEEEcCCCCcchHHHHHHHHHHHCCCe-EEEeecC
Confidence 3445566776666 78899999888888777766777788888875 5688865
No 112
>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.61 E-value=45 Score=22.19 Aligned_cols=28 Identities=14% Similarity=0.262 Sum_probs=21.1
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCC
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGE 118 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGE 118 (187)
.++||.|+++.. .-|+|+.|++|.+-..
T Consensus 11 ~~al~dy~~~~~-------------~eLsf~~Gd~i~v~~~ 38 (85)
T 2dlp_A 11 VIALRSYITDNC-------------SLLSFHRGDLIKLLPV 38 (85)
T ss_dssp EEESSCBCCSSS-------------SBCCBCTTCEEEECCC
T ss_pred EEECCCCCccCc-------------CCccCcCCCEEEEEEc
Confidence 578888877532 2588999999998764
No 113
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}
Probab=25.58 E-value=28 Score=21.47 Aligned_cols=33 Identities=15% Similarity=0.302 Sum_probs=22.5
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSM 123 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~ 123 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|
T Consensus 8 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~W 40 (60)
T 2xmf_A 8 CKALYAYDAQDT-------------DELSFNANDIIDIIKEDPSGW 40 (60)
T ss_dssp EEESSCBCCSST-------------TBCCBCTTCEEEEEEECTTSE
T ss_pred EEECccCCcCCc-------------CCcCCCCCCEEEEEEecCCCE
Confidence 467788876532 348889999998865544445
No 114
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=25.47 E-value=1.8e+02 Score=22.76 Aligned_cols=49 Identities=16% Similarity=0.302 Sum_probs=36.2
Q ss_pred CeEEEEEEEec-------CCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 38 PEVEIHLYRRG-------EGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 38 peVEV~LyrrG-------kGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
-..+++.+.-| .||.-||=-.++|....-..+-+-|.++|+. +++||..
T Consensus 16 dG~~l~~~~~~p~~~~~~~~~~VvllHG~g~~~~~~~~~~~~L~~~G~~-Vi~~D~r 71 (305)
T 1tht_A 16 NGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFH-VFRYDSL 71 (305)
T ss_dssp TTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGGGHHHHHHHHTTTCC-EEEECCC
T ss_pred CCCEEEEEEecCcccCCCCCCEEEEecCCccCchHHHHHHHHHHHCCCE-EEEeeCC
Confidence 34677766654 5788899888888766666677778888875 7899875
No 115
>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A
Probab=25.47 E-value=22 Score=22.00 Aligned_cols=34 Identities=15% Similarity=0.275 Sum_probs=22.7
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|.
T Consensus 10 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~W~ 43 (65)
T 3u23_A 10 CKVLFEYIPQNE-------------DELELKVGDIIDINEEVEEGWW 43 (65)
T ss_dssp EEECSCBCCSST-------------TBCCBCTTCEEEEEEEEETTEE
T ss_pred EEEeeeeCCCCc-------------CCcCCCCCCEEEEEEecCCCEE
Confidence 578888877632 2378899999988654444443
No 116
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A
Probab=25.09 E-value=1.1e+02 Score=22.40 Aligned_cols=51 Identities=20% Similarity=0.157 Sum_probs=30.0
Q ss_pred ccCCeEEEEEEEecCC---ceeEeecCcCCcccchh-hHHHHHHHhCceEEEeeeCC
Q 029818 35 TKVPEVEIHLYRRGEG---PIAVFKSSLVGWDQDQL-DVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 35 ~~~peVEV~LyrrGkG---PvavFKs~LgG~eqDqL-ev~~Il~k~gLKalfAf~p~ 87 (187)
.++.++.++....|.| |.-||=-.+.|...+-. .+..++ ++|+ .+++||..
T Consensus 10 ~~~~g~~l~~~~~g~~~~~~~vvllHG~~~~~~~~~~~~~~l~-~~g~-~vi~~D~~ 64 (293)
T 1mtz_A 10 AKVNGIYIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSLRDMT-KEGI-TVLFYDQF 64 (293)
T ss_dssp EEETTEEEEEEEECCSSCSEEEEEECCTTTCCSGGGGGGGGGG-GGTE-EEEEECCT
T ss_pred EEECCEEEEEEEECCCCCCCeEEEEeCCCCcchhHHHHHHHHH-hcCc-EEEEecCC
Confidence 3456788888888887 56666555433322222 233443 5565 57889865
No 117
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.02 E-value=35 Score=22.92 Aligned_cols=34 Identities=15% Similarity=0.376 Sum_probs=24.1
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.++||.|+++.. .-|+|+.|++|.+-.+..+-|.
T Consensus 20 ~~Alydy~~~~~-------------~eLsf~~Gd~i~v~~~~~~~Ww 53 (88)
T 1x2q_A 20 VRALYDFEAVED-------------NELTFKHGEIIIVLDDSDANWW 53 (88)
T ss_dssp EEESSCCCCCSS-------------SCCCCCSSCEEEEEECSCSSSE
T ss_pred EEEcccCCCCCc-------------CccCCCCCCEEEEEEeCCCCEE
Confidence 578888887632 2488899999998665555554
No 118
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=25.00 E-value=30 Score=21.50 Aligned_cols=34 Identities=6% Similarity=0.373 Sum_probs=23.5
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|.
T Consensus 8 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~Ww 41 (62)
T 1k4u_S 8 VEALFSYEATQP-------------EDLEFQEGDIILVLSKVNEEWL 41 (62)
T ss_dssp EECCSCBCCCSS-------------SBCCBCSSCEEEEEEESSSSCE
T ss_pred EEECCCCCcCCC-------------CCccCCCCCEEEEEEeCCCCEE
Confidence 467788876532 2488899999998766555553
No 119
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Probab=24.92 E-value=1.6e+02 Score=22.42 Aligned_cols=51 Identities=18% Similarity=0.206 Sum_probs=37.0
Q ss_pred ccCCeEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 35 TKVPEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 35 ~~~peVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
..+.++.+|....|.||.-||=-.+++....=-.+-..|.+ ++ .++|+|.-
T Consensus 10 ~~~~~~~~~~~~~g~g~~~vllHG~~~~~~~w~~~~~~l~~-~~-~vi~~Dl~ 60 (291)
T 3qyj_A 10 VDTTEARINLVKAGHGAPLLLLHGYPQTHVMWHKIAPLLAN-NF-TVVATDLR 60 (291)
T ss_dssp EECSSCEEEEEEECCSSEEEEECCTTCCGGGGTTTHHHHTT-TS-EEEEECCT
T ss_pred EecCCeEEEEEEcCCCCeEEEECCCCCCHHHHHHHHHHHhC-CC-EEEEEcCC
Confidence 45678999999999999999977776655444445556654 44 57898875
No 120
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Probab=24.84 E-value=29 Score=22.44 Aligned_cols=33 Identities=18% Similarity=0.532 Sum_probs=23.0
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSM 123 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~ 123 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|
T Consensus 16 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~W 48 (73)
T 3c0c_A 16 CKALYDFEPEND-------------GELGFREGDLITLTNQIDENW 48 (73)
T ss_dssp EEESSCBCCSST-------------TBCCBCTTCEEEEEEECSSSE
T ss_pred EEECccCCCCCC-------------CCccCcCCCEEEEEEecCCCE
Confidence 577888876532 248889999999866544555
No 121
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A*
Probab=24.67 E-value=2.1e+02 Score=22.10 Aligned_cols=51 Identities=18% Similarity=0.191 Sum_probs=37.6
Q ss_pred cCCeEEEEEEEec----CCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 36 KVPEVEIHLYRRG----EGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 36 ~~peVEV~LyrrG----kGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
...++++|.+..| .||.-||=-.++|....-..+-.-|.++|+. ++++|..
T Consensus 9 ~~~g~~l~y~~~G~~~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~-vi~~d~~ 63 (356)
T 2e3j_A 9 NCRGTRIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYR-VVAIDQR 63 (356)
T ss_dssp EETTEEEEEEEECCTTCCSCEEEEECCTTCCGGGGTTTHHHHHHTTCE-EEEECCT
T ss_pred ccCCeEEEEEEecCCCCCCCEEEEECCCCCcHHHHHHHHHHHHHcCCE-EEEEcCC
Confidence 3568899999999 7998888777777665544555667777875 5677754
No 122
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10
Probab=24.62 E-value=1.1e+02 Score=22.90 Aligned_cols=51 Identities=18% Similarity=0.121 Sum_probs=33.5
Q ss_pred ccCCeEEEEEEEecCCceeEeecCcC---CcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 35 TKVPEVEIHLYRRGEGPIAVFKSSLV---GWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 35 ~~~peVEV~LyrrGkGPvavFKs~Lg---G~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
....+++++.+..|.||.-||=-.++ +....--.+-+.|.++ -.+++||..
T Consensus 21 ~~~~g~~l~y~~~g~g~~vvllHG~~~~~~~~~~~~~~~~~L~~~--~~vi~~Dl~ 74 (296)
T 1j1i_A 21 VNAGGVETRYLEAGKGQPVILIHGGGAGAESEGNWRNVIPILARH--YRVIAMDML 74 (296)
T ss_dssp EEETTEEEEEEEECCSSEEEEECCCSTTCCHHHHHTTTHHHHTTT--SEEEEECCT
T ss_pred EEECCEEEEEEecCCCCeEEEECCCCCCcchHHHHHHHHHHHhhc--CEEEEECCC
Confidence 34578899999999999888876665 3211112333445554 478899976
No 123
>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1
Probab=24.41 E-value=37 Score=21.59 Aligned_cols=34 Identities=9% Similarity=0.202 Sum_probs=22.5
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|.
T Consensus 8 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~Ww 41 (73)
T 3thk_A 8 VLALYDYQEKSP-------------REVTMKKGDILTLLNSTNKDWW 41 (73)
T ss_dssp EEECSCBCCCST-------------TBCCBCTTCEEEEEECCSSSEE
T ss_pred EEECcCCCcCCC-------------CccCCCCCCEEEEEECCCCCeE
Confidence 467888876522 2378888998888555445554
No 124
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.35 E-value=33 Score=21.75 Aligned_cols=34 Identities=18% Similarity=0.533 Sum_probs=23.3
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+-|.
T Consensus 10 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~Ww 43 (68)
T 1x2k_A 10 FRALYTFEPRTP-------------DELYFEEGDIIYITDMSDTNWW 43 (68)
T ss_dssp EEESSCCCCCST-------------TBCCCCSSCEEEEEECSCSSEE
T ss_pred EEECceECCCCC-------------CcccCCCCCEEEEEEcCCCCEE
Confidence 467888876532 3588899999988665545553
No 125
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans}
Probab=24.18 E-value=1.7e+02 Score=21.28 Aligned_cols=50 Identities=14% Similarity=0.114 Sum_probs=34.9
Q ss_pred cCCeEEEEEEEecC---CceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 36 KVPEVEIHLYRRGE---GPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 36 ~~peVEV~LyrrGk---GPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
....+.++....|. ||.-||=-.++|...+=-.+-..|.+ |+ .++|||..
T Consensus 12 ~~~g~~l~~~~~g~~~~~~~vvllHG~~~~~~~~~~~~~~L~~-~~-~vi~~Dl~ 64 (285)
T 3bwx_A 12 SSDGLRLHFRAYEGDISRPPVLCLPGLTRNARDFEDLATRLAG-DW-RVLCPEMR 64 (285)
T ss_dssp CTTSCEEEEEEECBCTTSCCEEEECCTTCCGGGGHHHHHHHBB-TB-CEEEECCT
T ss_pred cCCCceEEEEEcCCCCCCCcEEEECCCCcchhhHHHHHHHhhc-CC-EEEeecCC
Confidence 34667888888887 88888877777755554445555655 55 47799865
No 126
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A
Probab=24.13 E-value=1.6e+02 Score=20.90 Aligned_cols=52 Identities=12% Similarity=-0.031 Sum_probs=38.4
Q ss_pred cccCCeEEEEEEEecC--CceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 34 KTKVPEVEIHLYRRGE--GPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 34 ~~~~peVEV~LyrrGk--GPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
........++.+..|. ||.-||=-.++|....-..+-..|.+ |+ .+++||..
T Consensus 14 ~~~~~g~~l~~~~~g~~~~~~vl~lHG~~~~~~~~~~~~~~l~~-~~-~v~~~d~~ 67 (299)
T 3g9x_A 14 YVEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SH-RCIAPDLI 67 (299)
T ss_dssp EEEETTEEEEEEEESCSSSCCEEEECCTTCCGGGGTTTHHHHTT-TS-CEEEECCT
T ss_pred eeeeCCeEEEEEecCCCCCCEEEEECCCCccHHHHHHHHHHHcc-CC-EEEeeCCC
Confidence 3456889999999998 99999988888876655555566654 54 56788765
No 127
>1oqw_A Fimbrial protein; type IV pilin, fiber-forming protein, adhesion, pseudomonas aerugionosa, PAK pilin, cell adhesion; 2.00A {Pseudomonas aeruginosa} SCOP: d.24.1.1
Probab=24.03 E-value=33 Score=25.10 Aligned_cols=27 Identities=7% Similarity=0.353 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHhcCChhHHHhcc
Q 029818 130 ILFGLTVITLLITLLFKDRPEWINKLN 156 (187)
Q Consensus 130 i~~gva~vtlmi~~~~k~~Pew~k~~~ 156 (187)
+++.++++++|++++++....++.+.+
T Consensus 6 llivi~Ii~il~~ia~p~~~~~~~~~~ 32 (144)
T 1oqw_A 6 LMIVVAIIGILAAIAIPQYQNYVARSE 32 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 577888899999999888777766544
No 128
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=24.01 E-value=67 Score=21.87 Aligned_cols=33 Identities=21% Similarity=0.428 Sum_probs=23.2
Q ss_pred cCCeEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhC
Q 029818 36 KVPEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYG 77 (187)
Q Consensus 36 ~~peVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~g 77 (187)
.+| ++.+|+.|+ +++- +.|.+.+ ++.+.++||.
T Consensus 73 ~~P--T~~~~~~G~-~v~~----~~G~~~~--~l~~~i~k~K 105 (105)
T 3zzx_A 73 CMP--TFLFMKNGQ-KLDS----LSGANYD--KLLELVEKNK 105 (105)
T ss_dssp BSS--EEEEEETTE-EEEE----EESCCHH--HHHHHHHHHC
T ss_pred eec--EEEEEECCE-EEEE----EeCcCHH--HHHHHHHhcC
Confidence 468 688999887 5554 3576555 5788898873
No 129
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Probab=23.95 E-value=1e+02 Score=23.00 Aligned_cols=46 Identities=15% Similarity=0.075 Sum_probs=30.2
Q ss_pred EEEEEEEecCCceeEeecCcC---CcccchhhHH-HHHHHhCceEEEeeeCC
Q 029818 40 VEIHLYRRGEGPIAVFKSSLV---GWDQDQLDVR-EILDKYGFKSVYAFSTG 87 (187)
Q Consensus 40 VEV~LyrrGkGPvavFKs~Lg---G~eqDqLev~-~Il~k~gLKalfAf~p~ 87 (187)
+.++.+..|.||.-||=-.++ +....--.+- .-|.++ -.++|||..
T Consensus 23 ~~l~y~~~G~g~~vvllHG~~~~~~~~~~w~~~~~~~L~~~--~~vi~~D~~ 72 (286)
T 2puj_A 23 FNIHYNEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAG--YRVILKDSP 72 (286)
T ss_dssp EEEEEEEECCSSEEEEECCCSTTCCHHHHHTTTHHHHHHTT--CEEEEECCT
T ss_pred EEEEEEecCCCCcEEEECCCCCCCCcHHHHHHHHHHHHhcc--CEEEEECCC
Confidence 899999999999888877775 4222111222 344554 368999976
No 130
>1qme_A Penicillin-binding protein 2X; peptidoglycan synthesis, resistance, cell WALL, transmembrane; 2.4A {Streptococcus pneumoniae} SCOP: d.11.1.1 d.11.1.1 d.175.1.1 e.3.1.1 PDB: 1qmf_A* 1pyy_A* 1rp5_A 1pmd_A 1k25_A 2zc3_B* 2z2l_B* 2z2m_B* 2zc4_B* 2zc3_A* 2z2l_A* 2z2m_A* 2zc4_A* 2zc3_C* 2z2l_C* 2z2m_C* 2zc4_C*
Probab=23.91 E-value=1.9e+02 Score=26.37 Aligned_cols=64 Identities=14% Similarity=0.339 Sum_probs=46.1
Q ss_pred CeEEEEEEEecCCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCCCcccc-ceeecCCCCcccccccCCcEEEe
Q 029818 38 PEVEIHLYRRGEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTGVGRGV-PIRFNRRNGRSMLGYKDGSVVYM 115 (187)
Q Consensus 38 peVEV~LyrrGkGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~~gRGv-~irfnPrnG~SlL~Y~dgsvI~l 115 (187)
+.-.|.|+.-| ++.| =++-|++.+ |...+|++.||+.-+. +.|. -|.-+|..|-.+ ..|+.|.|
T Consensus 634 ~g~~V~l~vs~--~~~v--Pd~~G~~~~--~A~~~L~~~Gl~v~~~-----~~G~~V~~Qsp~~G~~v---~~g~~V~l 698 (702)
T 1qme_A 634 PNQQVLILSDK--AEEV--PDMYGWTKE--TAETLAKWLNIELEFQ-----GSGSTVQKQDVRANTAI---KDIKKITL 698 (702)
T ss_dssp TTCEEEEEESC--CCBC--CCCTTCBHH--HHHHHHHHHTCEEEEE-----SSSSEEEEESSCTTSBC---TTCCEEEE
T ss_pred CCCEEEEEEcC--CEeC--CCCCCCCHH--HHHHHHHHCCCEEEEe-----cCCCEEEEecCCCcCCC---CCCCEEEE
Confidence 34467777764 4433 368899887 5899999999996542 4688 888899988775 45777755
No 131
>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.88 E-value=33 Score=22.71 Aligned_cols=27 Identities=7% Similarity=0.027 Sum_probs=19.9
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCC
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDG 117 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDG 117 (187)
.++||.|+++.. .-|+|+.|++|.+-.
T Consensus 20 ~~Alydy~a~~~-------------~eLs~~~Gd~i~v~~ 46 (79)
T 2cud_A 20 LAVLSDYPSPDI-------------SPPIFRRGEKLRVIS 46 (79)
T ss_dssp EEESSCSSCTTT-------------SCCSSCTTCEEEEEE
T ss_pred EEEccCCCCCCC-------------CcCCCCCCCEEEEEe
Confidence 678999987632 237889999988854
No 132
>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}
Probab=23.82 E-value=42 Score=21.61 Aligned_cols=34 Identities=15% Similarity=0.275 Sum_probs=23.9
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|.++.. .-|+++.|++|.+-.+..+.|.
T Consensus 4 ~~Alydy~~~~~-------------~eLs~~~Gd~i~v~~~~~~gWw 37 (65)
T 2fei_A 4 CKVLFEYIPQNE-------------DELELKVGDIIDINEEVEEGWW 37 (65)
T ss_dssp EECSSCCCCCST-------------TBCCCCTTCEEECCCCSSSSEE
T ss_pred EEECccCCcCCc-------------CccCCCCCCEEEEEEecCCCEE
Confidence 367788876532 2578899999998776555564
No 133
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.76 E-value=35 Score=21.71 Aligned_cols=34 Identities=12% Similarity=0.326 Sum_probs=23.5
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|.
T Consensus 10 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~Ww 43 (68)
T 2dl4_A 10 YVALYKFVPQEN-------------EDLEMRPGDIITLLEDSNEDWW 43 (68)
T ss_dssp EEESSCCCCSST-------------TBCCCCTTCEEEEEECCCSSEE
T ss_pred EEEeeeECCCCc-------------CCcCCCCCCEEEEEEeCCCCEE
Confidence 467787776532 2588899999998766555553
No 134
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=23.51 E-value=49 Score=31.00 Aligned_cols=52 Identities=15% Similarity=0.342 Sum_probs=39.5
Q ss_pred cCCeEEEEEEEecC----CceeEeecC-----cCCcccchhhHHHHHHHhCceEEEeeeCCC
Q 029818 36 KVPEVEIHLYRRGE----GPIAVFKSS-----LVGWDQDQLDVREILDKYGFKSVYAFSTGV 88 (187)
Q Consensus 36 ~~peVEV~LyrrGk----GPvavFKs~-----LgG~eqDqLev~~Il~k~gLKalfAf~p~~ 88 (187)
+.|.|.- +|.+|. |||.++.-+ +..|...--|+|.+.++-|-+.|+||-...
T Consensus 362 ~HPgv~~-~~~~g~~~vgG~i~~l~~~~~~~~~~~~~~tP~e~r~~f~~~gw~~VvafqtrN 422 (630)
T 1x6v_B 362 NHPYIKM-VMEQGDWLIGGDLQVLDRVYWNDGLDQYRLTPTELKQKFKDMNADAVSAFQLRN 422 (630)
T ss_dssp TSHHHHH-HHHSCSEEEEEEEEECSCCCCCSSCGGGCCCHHHHHHHHHHTTCSEEEEEEESS
T ss_pred CCcchHH-HHhCCCEEEEeEEEEEecCcccccchhhcCCHHHHHHHHHHcCCCeEEEEecCC
Confidence 4455553 455553 788887653 667888999999999999999999997653
No 135
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Probab=23.51 E-value=41 Score=20.59 Aligned_cols=33 Identities=6% Similarity=0.039 Sum_probs=22.3
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSM 123 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~ 123 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|
T Consensus 4 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~W 36 (58)
T 2bz8_A 4 AIVEFDYQAQHD-------------DELTISVGEIITNIRKEDGGW 36 (58)
T ss_dssp EEESSCBCCCST-------------TBCCBCTTCEEEEEECCTTTE
T ss_pred EEECcccCCCCc-------------CEeeECCCCEEEEEEeCCCCE
Confidence 467777776532 257889999998865544545
No 136
>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1
Probab=23.45 E-value=39 Score=23.05 Aligned_cols=35 Identities=11% Similarity=0.227 Sum_probs=24.7
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCccc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMIK 125 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~K 125 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|..
T Consensus 20 ~~Alydy~a~~~-------------~eLsf~~Gd~i~Vl~~~~~gWw~ 54 (83)
T 1neg_A 20 VLALYDYQEKSP-------------REVTMKKGDILTLLNSTNKDWWK 54 (83)
T ss_dssp EEESSCBCCSST-------------TBCCBCTTCEEEEEECCSSSEEE
T ss_pred EEEccccCCCCC-------------CccccCCCCEEEEEEecCCCEEE
Confidence 568888887532 25788999999987665555643
No 137
>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.40 E-value=18 Score=23.33 Aligned_cols=35 Identities=9% Similarity=0.313 Sum_probs=23.3
Q ss_pred CceEEEeeeC-CCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 77 GFKSVYAFST-GVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 77 gLKalfAf~p-~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
-.+++|.|++ +.. .-|+|+.|++|.+-.+..+.|.
T Consensus 9 ~~~Alydy~~~~~~-------------~eLsf~~Gd~i~v~~~~~~~W~ 44 (71)
T 2gqi_A 9 RVRAILPYTKVPDT-------------DEISFLKGDMFIVHNELEDGWM 44 (71)
T ss_dssp CEEESSCCCCCTTS-------------SCCCCCTTCBCCCCEECSSSCE
T ss_pred EEEECcccCCCCCC-------------CCCCCCCCCEEEEEEecCCCEE
Confidence 4678888887 432 2477888998887655445553
No 138
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=23.27 E-value=44 Score=25.17 Aligned_cols=26 Identities=12% Similarity=0.129 Sum_probs=20.4
Q ss_pred CcccchhhHHHHHHHhCceEEEeeeC
Q 029818 61 GWDQDQLDVREILDKYGFKSVYAFST 86 (187)
Q Consensus 61 G~eqDqLev~~Il~k~gLKalfAf~p 86 (187)
||..+--.+-+||++||+|+-|-...
T Consensus 14 G~~~~~~~il~iL~~~~v~aTfFv~g 39 (195)
T 2cc0_A 14 GPSGSTQSLLNALRQNGLRATMFNQG 39 (195)
T ss_dssp CCSTTHHHHHHHHHHTTCCCEEEECH
T ss_pred CCchhHHHHHHHHHHcCCCEEEEecC
Confidence 66655456789999999999997654
No 139
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}
Probab=23.18 E-value=39 Score=20.39 Aligned_cols=33 Identities=9% Similarity=0.276 Sum_probs=22.4
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcC-CCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQ-DSM 123 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPK-dS~ 123 (187)
.+++|.|+++.. .-|+++.|++|.+-.+.. +.|
T Consensus 3 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~~W 36 (54)
T 2a28_A 3 MEAIYAYEAQGD-------------DEISIDPGDIITVIRGDDGSGW 36 (54)
T ss_dssp EEBCSCBCCCST-------------TBCCBCTTCEEEEEECCCSSSE
T ss_pred EEECccCCcCCC-------------CCccCCCCCEEEEEEecCCCCE
Confidence 367777776532 358899999998866553 445
No 140
>2p74_A Beta-lactamase CTX-M-9A; ultra-high resolution, acylation, ESBL, hydrolase; HET: PO4; 0.88A {Escherichia coli} PDB: 3g2y_A* 4dds_A* 4ddy_A* 4de0_A* 4de1_A* 4de2_A* 4de3_A* 1ylj_A* 1yly_A* 1ym1_A* 1yms_A* 1ymx_A* 3g2z_A* 3g30_A* 3g31_A* 3g32_A* 3g34_A* 3g35_A* 1ylt_A* 1ylz_A* ...
Probab=23.12 E-value=57 Score=24.69 Aligned_cols=30 Identities=13% Similarity=0.124 Sum_probs=21.7
Q ss_pred hHHHHHHHhCce-EEEeeeCCCccccceeecCC
Q 029818 68 DVREILDKYGFK-SVYAFSTGVGRGVPIRFNRR 99 (187)
Q Consensus 68 ev~~Il~k~gLK-alfAf~p~~gRGv~irfnPr 99 (187)
++++++++++-+ ++++.|+.+|+=+ -+||.
T Consensus 8 ~l~~~~~~~~~~~~~~v~d~~tG~~l--~~~~~ 38 (263)
T 2p74_A 8 KLAALEKSSGGRLGVALIDTADNTQV--LYRGD 38 (263)
T ss_dssp HHHHHHHHHTSEEEEEEEETTTTEEE--EESTT
T ss_pred HHHHHHHhcCCcEEEEEEECCCCCeE--eeCCC
Confidence 577889888766 5788888888755 45554
No 141
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=23.01 E-value=2.1e+02 Score=20.60 Aligned_cols=39 Identities=15% Similarity=0.321 Sum_probs=26.9
Q ss_pred cCCceeEeecCcCCc--ccchhhHHHHHHHhCceEEEeeeCC
Q 029818 48 GEGPIAVFKSSLVGW--DQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 48 GkGPvavFKs~LgG~--eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
+.+|.-||=-.++|. ...-..+-+-|.++|+. +++||..
T Consensus 25 ~~~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~-vi~~D~~ 65 (251)
T 2wtm_A 25 EKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVA-TLRADMY 65 (251)
T ss_dssp SSEEEEEEECCTTCCTTSHHHHHHHHHHHHTTCE-EEEECCT
T ss_pred CCCCEEEEEcCCCcccccccHHHHHHHHHHCCCE-EEEecCC
Confidence 356878887777776 44444566677778874 6888865
No 142
>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=22.85 E-value=68 Score=21.27 Aligned_cols=32 Identities=13% Similarity=0.165 Sum_probs=21.7
Q ss_pred hCceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCc
Q 029818 76 YGFKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEP 119 (187)
Q Consensus 76 ~gLKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEP 119 (187)
+.++++|.|.|+... -=|+|+.|++|.+=.+.
T Consensus 8 ~~~~aly~y~a~~~~------------dELsf~~Gd~i~Vl~~~ 39 (69)
T 1nm7_A 8 HFARALYDFVPENPE------------MEVALKKGDLMAILSKK 39 (69)
T ss_dssp -CEEECSCCCCSSTT------------SCCCCCTTCEEEECCSS
T ss_pred eEEEEEecccCCCCC------------CccCCCCCCEEEEEecC
Confidence 467888988876322 13678889999885544
No 143
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=22.80 E-value=32 Score=25.39 Aligned_cols=74 Identities=11% Similarity=0.053 Sum_probs=48.9
Q ss_pred hHHHHHHHhC--ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCccch-hh-----HHHHHHHHHHH
Q 029818 68 DVREILDKYG--FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMIKP-VT-----KILFGLTVITL 139 (187)
Q Consensus 68 ev~~Il~k~g--LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~KP-vt-----ri~~gva~vtl 139 (187)
.++++|++|. ..+||+.|-...-|+-.-.. +.|+ +| .|=++|-+|+.|-..+..| +| ..-+|-.++-+
T Consensus 169 ~~~~~l~~~~~~~~ai~~~~d~~a~g~~~al~-~~g~--vp-~di~vvg~d~~~~~~~~~p~lttv~~~~~~~g~~a~~~ 244 (272)
T 3o74_A 169 LMQQLIDDLGGLPDALVTTSYVLLQGVFDTLQ-ARPV--DS-RQLQLGTFGDNQLLDFLPLPVNAMAQQHGQIAATALEL 244 (272)
T ss_dssp HHHHHHHHHTSCCSEEEESSHHHHHHHHHHHH-TSCG--GG-CCCEEEEESCCGGGGTSSSCEEEEECCHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCcEEEEeCchHHHHHHHHHH-HcCC--Cc-cceEEEEeCChHHHHhcCCCceEEEeCHHHHHHHHHHH
Confidence 4678888886 89999988665555544443 4455 23 4567888998876655433 33 33567777777
Q ss_pred HHHHHh
Q 029818 140 LITLLF 145 (187)
Q Consensus 140 mi~~~~ 145 (187)
|+-.+-
T Consensus 245 l~~~i~ 250 (272)
T 3o74_A 245 ALAAIE 250 (272)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 776665
No 144
>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...
Probab=22.71 E-value=42 Score=20.50 Aligned_cols=34 Identities=12% Similarity=0.201 Sum_probs=21.8
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|+++. -.-|+++.|.+|.+-.+..+.|.
T Consensus 9 ~~al~dy~~~~-------------~~eLs~~~Gd~i~v~~~~~~~Ww 42 (62)
T 3ngp_A 9 VLVLYDYQEKS-------------PRELTVKKGDILTLLNSTNKDWW 42 (62)
T ss_dssp EEECSCBCCCS-------------TTBCCBCTTCEEEEEECCSSSEE
T ss_pred EEECcCCCCCC-------------CCCccCCCCCEEEEeEecCCCeE
Confidence 46777776652 23468888988887555444453
No 145
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Probab=22.69 E-value=33 Score=21.10 Aligned_cols=33 Identities=12% Similarity=0.300 Sum_probs=22.5
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSM 123 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~ 123 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|
T Consensus 7 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~W 39 (59)
T 2g6f_X 7 VRAKFNFQQTNE-------------DELSFSKGDVIHVTRVEEGGW 39 (59)
T ss_dssp EEESSCBCCSST-------------TBCCBCTTCEEEEEEECTTSE
T ss_pred EEECceeCCCCc-------------CCcCCCCCCEEEEEEecCCCE
Confidence 467888876532 358889999998865444445
No 146
>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B
Probab=22.63 E-value=40 Score=24.43 Aligned_cols=35 Identities=17% Similarity=0.222 Sum_probs=25.2
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCC-----CcCCCccc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDG-----EPQDSMIK 125 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDG-----EPKdS~~K 125 (187)
.++||.|+++.. .-|+|+.|++|.+-. +..+-|.+
T Consensus 47 ~~Alydy~a~~~-------------dELsf~~GDiI~Vl~~~~~~~~~~gWw~ 86 (115)
T 1bb9_A 47 VQAQHDYTATDT-------------DELQLKAGDVVLVIPFQNPEEQDEGWLM 86 (115)
T ss_dssp EEESSCBCCSST-------------TBCCBCTTCEEEEECCSCGGGCCTTEEE
T ss_pred EEECCccCCCCC-------------CccCcCCCCEEEEeeccCCcccCCCeEE
Confidence 688999987642 238899999999977 44455543
No 147
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=22.57 E-value=44 Score=20.49 Aligned_cols=29 Identities=17% Similarity=0.354 Sum_probs=20.5
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEP 119 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEP 119 (187)
.+++|.|+++. -.-|+++.|++|.+-.+.
T Consensus 6 ~~al~dy~~~~-------------~~eLs~~~Gd~i~v~~~~ 34 (60)
T 1oot_A 6 AVALYSFAGEE-------------SGDLPFRKGDVITILKKS 34 (60)
T ss_dssp EEESSCBCCCS-------------TTBCCBCTTCEEEEEECC
T ss_pred EEECccCCcCC-------------cCEeeEcCCCEEEEEEeC
Confidence 46778887653 235888999999986553
No 148
>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.38 E-value=42 Score=22.55 Aligned_cols=35 Identities=11% Similarity=0.081 Sum_probs=22.4
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSM 123 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~ 123 (187)
.+++|.|+|+.. .-.-|+|+.|++|.+-....+-|
T Consensus 19 ~~alydy~~~a~-----------~~~eLsf~~Gd~i~v~~~~~~~W 53 (88)
T 2dbk_A 19 AKAIQKRVPCAY-----------DKTALALEVGDIVKVTRMNINGQ 53 (88)
T ss_dssp EEECSCBCCCTT-----------CSSBCCBCTTCEEEEEEECTTSC
T ss_pred EEEcccccCCCC-----------CCCcccCCCCCEEEEEEecCCCE
Confidence 588898886410 11238889999998854434445
No 149
>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}
Probab=22.28 E-value=34 Score=21.87 Aligned_cols=35 Identities=9% Similarity=0.171 Sum_probs=23.4
Q ss_pred CceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 77 GFKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 77 gLKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
-.+++|.|+++.. .-|+++.|++|.+-.+..+-|.
T Consensus 8 ~~~al~~y~~~~~-------------~eLs~~~Gd~i~v~~~~~~gW~ 42 (71)
T 2fpf_A 8 THRAIFRFVPRHE-------------DELELEVDDPLLVELQAEDYWY 42 (71)
T ss_dssp CEEECSCBCCSST-------------TBCCBCTTCEEEEEEECTTSEE
T ss_pred EEEECeeECccCC-------------CcccCcCCcEEEEeEecCCCEE
Confidence 4678888887532 2478889999988544334453
No 150
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=22.20 E-value=1.9e+02 Score=20.20 Aligned_cols=38 Identities=13% Similarity=0.050 Sum_probs=30.1
Q ss_pred CCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 49 EGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 49 kGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
+||.-||=-.++|....--.+-+-|.++|+. +++||..
T Consensus 3 ~g~~vv~lHG~~~~~~~~~~~~~~l~~~g~~-vi~~D~~ 40 (258)
T 3dqz_A 3 RKHHFVLVHNAYHGAWIWYKLKPLLESAGHR-VTAVELA 40 (258)
T ss_dssp CCCEEEEECCTTCCGGGGTTHHHHHHHTTCE-EEEECCT
T ss_pred CCCcEEEECCCCCccccHHHHHHHHHhCCCE-EEEecCC
Confidence 5788888888888777766788888888875 7888865
No 151
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=22.10 E-value=44 Score=20.46 Aligned_cols=27 Identities=22% Similarity=0.413 Sum_probs=19.3
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCC
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDG 117 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDG 117 (187)
.+++|.|+++.. .-|+++.|++|.+=.
T Consensus 8 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~ 34 (63)
T 3eg3_A 8 FVALYDFVASGD-------------NTLSITKGEKLRVLG 34 (63)
T ss_dssp EEESSCBCCCSS-------------SBCCBCTTCEEEEEE
T ss_pred EEEcceECCCCC-------------CccCCCCCCEEEEEE
Confidence 578888877622 247888899988755
No 152
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=22.02 E-value=49 Score=20.86 Aligned_cols=34 Identities=12% Similarity=0.096 Sum_probs=23.5
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|.++.. .-|+++.|++|.+-.+..+.|.
T Consensus 5 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~Ww 38 (67)
T 1gl5_A 5 VVAMYDFQATEA-------------HDLRLERGQEYIILEKNDLHWW 38 (67)
T ss_dssp EEECSCBCCSSS-------------SBCCBCTTCEEEEEECSSSSEE
T ss_pred EEECccCCCCCC-------------CeecCCcCCEEEEEEccCCCcE
Confidence 578888887632 2477888999988665545553
No 153
>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}
Probab=21.99 E-value=69 Score=21.63 Aligned_cols=34 Identities=15% Similarity=0.215 Sum_probs=23.1
Q ss_pred ceEEEee-eCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAF-STGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf-~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.| +++. -.-|+++.|++|.+-.+..+.|.
T Consensus 21 ~~Alydy~~a~~-------------~~eLsf~~GDiI~V~~~~~~gWw 55 (83)
T 2ke9_A 21 VRALKDFWNLHD-------------PTALNVRAGDVITVLEQHPDGRW 55 (83)
T ss_dssp EEESSCBCCCSC-------------TTBCCBCTTCEEEESCSSCSSCE
T ss_pred EEEccccCCCCC-------------CCcccccCCCEEEEEEecCCCeE
Confidence 4778888 4442 23588899999998766555553
No 154
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=21.78 E-value=43 Score=21.78 Aligned_cols=34 Identities=15% Similarity=0.262 Sum_probs=23.5
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCc--CCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEP--QDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEP--KdS~~ 124 (187)
.+++|.|+++.. .-|+++.|++|.+-.+. .+.|.
T Consensus 5 ~~Alydy~a~~~-------------~eLs~~~Gd~i~vl~~~~~~~gWw 40 (69)
T 2ydl_A 5 CKVIFPYEAQND-------------DELTIKEGDIVTLINKDCIDVGWW 40 (69)
T ss_dssp EEESSCBCCCST-------------TBCCBCTTCEEEEEESCCSSTTEE
T ss_pred EEEcccCCCCCC-------------CccccCCCCEEEEEEcCCCCCCEE
Confidence 467888877632 35888999999987653 44453
No 155
>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}
Probab=21.78 E-value=60 Score=20.35 Aligned_cols=34 Identities=18% Similarity=0.266 Sum_probs=23.4
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|.++.. .-|+++.|++|.+=.+..+-|.
T Consensus 13 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~Ww 46 (68)
T 1s1n_A 13 YIAVGDFTAQQV-------------GDLTFKKGEILLVIEKKPDGWW 46 (68)
T ss_dssp EEECSCBCCSSS-------------SCCCBCSSEEEEECSCCSSSEE
T ss_pred EEEcccCCCCCC-------------CcCCCCCCCEEEEEEcCCCCeE
Confidence 457788876532 2578899999998666555553
No 156
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=21.76 E-value=62 Score=29.11 Aligned_cols=51 Identities=24% Similarity=0.399 Sum_probs=38.4
Q ss_pred CCeEEEEEEEec----CCceeEeec----CcCCcccchhhHHHHHHHhCceEEEeeeCCC
Q 029818 37 VPEVEIHLYRRG----EGPIAVFKS----SLVGWDQDQLDVREILDKYGFKSVYAFSTGV 88 (187)
Q Consensus 37 ~peVEV~LyrrG----kGPvavFKs----~LgG~eqDqLev~~Il~k~gLKalfAf~p~~ 88 (187)
.|.|. .+|.+| .|||.++.- .+..|...--|+|.++++-|-+.|+||-...
T Consensus 115 hp~v~-~~~~~g~~~~~G~~~~l~~~~~~~~~~~~~tp~e~r~~~~~~gw~~v~afqtrn 173 (546)
T 2gks_A 115 HPLVA-EMHTWGEYYISGELKVIQLPKYYDFPEYRKTPKQVREEIKSLGLDKIVAFQTRN 173 (546)
T ss_dssp SHHHH-HHTTSCSEEEECCEEESCCCCCCSCGGGBCCHHHHHHHHHHHTCSCEEEECCSS
T ss_pred CcchH-HHhhcCCEEEEEEEEEeecCCcCCcHhhcCCHHHHHHHHHHcCCCcEEEEecCC
Confidence 44444 234455 488888754 3667788889999999999999999997663
No 157
>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}
Probab=21.63 E-value=19 Score=24.63 Aligned_cols=34 Identities=15% Similarity=0.391 Sum_probs=23.1
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+|+|.|+++.. .-|+++.|++|.+-.+..+.|.
T Consensus 21 ~~Alydy~a~~~-------------~eLsf~~Gd~I~Vl~~~~~gWw 54 (79)
T 1z9q_A 21 AEALFDFTGNSK-------------LELNFKAGDVIFLLSRINKDWL 54 (79)
T ss_dssp EEESSCCCCSST-------------TBCCCCTTCCBCCCEESSSSEE
T ss_pred EEEcCccCCCCC-------------CcccccCCCEEEEeEecCCCEE
Confidence 567888876532 2478888999888665555553
No 158
>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A
Probab=21.62 E-value=47 Score=20.41 Aligned_cols=32 Identities=22% Similarity=0.211 Sum_probs=22.0
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSM 123 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~ 123 (187)
.+++|.|.++.. .-|+++.|++|.+-.+ .+.|
T Consensus 4 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~-~~~W 35 (60)
T 1i07_A 4 AKSKYDFVARNS-------------SELSVMKDDVLEILDD-RRQW 35 (60)
T ss_dssp EEESSCBCCSST-------------TBCCBCTTCEEEECGG-GCCE
T ss_pred EEECccCCCCCC-------------CcccCCCCCEEEEEEc-CCCe
Confidence 467888877632 2477889999998666 4444
No 159
>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.58 E-value=42 Score=21.20 Aligned_cols=34 Identities=9% Similarity=0.224 Sum_probs=22.5
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|.++. -.-|+++.|++|.+-.+..+-|.
T Consensus 10 ~~al~dy~~~~-------------~~eLs~~~Gd~i~v~~~~~~~Ww 43 (68)
T 1x2p_A 10 FVAIADYAATD-------------ETQLSFLRGEKILILRQTTADWW 43 (68)
T ss_dssp EEESSCCCCSS-------------TTBCCCCTTCEEEEEECCSSSEE
T ss_pred EEECceECCCC-------------cCCcCCCCCCEEEEEEcCCCCEE
Confidence 46777776542 22478899999998665445553
No 160
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Probab=21.58 E-value=45 Score=20.74 Aligned_cols=33 Identities=12% Similarity=0.300 Sum_probs=22.7
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSM 123 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~ 123 (187)
.+++|.|+++.. .-|+++.|++|.+-.+..+.|
T Consensus 9 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~W 41 (64)
T 2ak5_A 9 VRAKFNFQQTNE-------------DELSFSKGDVIHVTRVEEGGW 41 (64)
T ss_dssp EEESSCBCCCST-------------TBCCBCTTCEEEEEECCTTSE
T ss_pred EEEccccCCcCc-------------CcccCCCCCEEEEeEecCCCE
Confidence 467888876532 358889999998865544555
No 161
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=21.56 E-value=43 Score=20.32 Aligned_cols=33 Identities=12% Similarity=0.172 Sum_probs=22.2
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcC-CCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQ-DSM 123 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPK-dS~ 123 (187)
.+++|.|+++.. .-|+++.|++|.+-.+.. +.|
T Consensus 4 ~~alydy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~~W 37 (58)
T 1zuu_A 4 NKVLYAYVQKDD-------------DEITITPGDKISLVARDTGSGW 37 (58)
T ss_dssp CEECSCBCCCST-------------TBCCBCTTCCEEEEECCSSSSE
T ss_pred EEEeeeECCcCC-------------CcccCCCCCEEEEeEcCCCCCC
Confidence 468888887632 257888899888855443 345
No 162
>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=21.55 E-value=44 Score=21.76 Aligned_cols=33 Identities=12% Similarity=0.321 Sum_probs=22.9
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSM 123 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~ 123 (187)
.+++|.|.++.. .-|+++.|++|.+-.+..+.|
T Consensus 10 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~W 42 (78)
T 2yuo_A 10 AKALLDFERHDD-------------DELGFRKNDIITIISQKDEHC 42 (78)
T ss_dssp EEESSCBCCSST-------------TBCCBCTTCEEEEEECCSSSE
T ss_pred EEECccCCCCCC-------------CCccCCCCCEEEEEEecCCCE
Confidence 477888877632 247888999998866554555
No 163
>3dqy_A Toluene 1,2-dioxygenase system ferredoxin subunit; rieske, iron-sulfur cluster, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport; 1.20A {Pseudomonas putida} SCOP: b.33.1.0 PDB: 4emj_B*
Probab=21.51 E-value=1.1e+02 Score=20.92 Aligned_cols=53 Identities=13% Similarity=0.145 Sum_probs=32.2
Q ss_pred cCCceeEeecCcCCcccchhhHHHHHHHhCceEEEeeeCC-CccccceeecCCCCcc-cccccCCcEEEe-CCCcCC
Q 029818 48 GEGPIAVFKSSLVGWDQDQLDVREILDKYGFKSVYAFSTG-VGRGVPIRFNRRNGRS-MLGYKDGSVVYM-DGEPQD 121 (187)
Q Consensus 48 GkGPvavFKs~LgG~eqDqLev~~Il~k~gLKalfAf~p~-~gRGv~irfnPrnG~S-lL~Y~dgsvI~l-DGEPKd 121 (187)
+..|+.|||. +| .+|||+.. .-||.++...--+|.. .-|| +|+..-+ ||+...
T Consensus 22 ~g~~i~v~r~--~g------------------~~~A~~~~CpH~g~~L~~g~~~~~~i~Cp~-Hg~~Fdl~~G~~~~ 77 (106)
T 3dqy_A 22 GPEPVMVCNV--DG------------------EFFAVQDTCTHGDWALSDGYLDGDIVECTL-HFGKFCVRTGKVKA 77 (106)
T ss_dssp SSSCEEEEEE--TT------------------EEEEEESBCSSSSCBGGGSEEETTEEECTT-TCCEEETTTCCEEE
T ss_pred CCEEEEEEEE--CC------------------EEEEEeCcCCCCCCCCcCcEEeCCEEECCC-CCCEEeCCCCCEeC
Confidence 4558889884 22 58888888 5578777643222322 3333 5777775 776543
No 164
>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.37 E-value=37 Score=22.24 Aligned_cols=29 Identities=14% Similarity=0.322 Sum_probs=21.3
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEP 119 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEP 119 (187)
.+++|.|+++.. .-|+|+.|++|.+-.+.
T Consensus 20 ~~al~dy~~~~~-------------~eLsf~~Gd~i~v~~~~ 48 (80)
T 2d8h_A 20 VTALYSFEGQQP-------------GDLNFQAGDRITVISKT 48 (80)
T ss_dssp EECSSCEECSST-------------TBCEECTTCEEEEEECC
T ss_pred EEECccCCcCCC-------------CeeeEcCCCEEEEeECc
Confidence 578888887632 24788999999986554
No 165
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A
Probab=21.33 E-value=35 Score=21.44 Aligned_cols=34 Identities=9% Similarity=0.341 Sum_probs=23.0
Q ss_pred ceEEEeeeC-CCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFST-GVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p-~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|.+ +. -.-|+++.|++|.+-.+..+.|.
T Consensus 8 ~~alydy~~~~~-------------~~eLs~~~Gd~i~v~~~~~~gW~ 42 (65)
T 2j05_A 8 VRAILPYTKVPD-------------TDEISFLKGDMFIVHNELEDGWM 42 (65)
T ss_dssp EEESSCBCCCTT-------------SSBCCBCTTCEEEEEEECTTSEE
T ss_pred EEEccccCCCCC-------------CCcCcCCCCCEEEEeEecCCCEE
Confidence 578888877 43 22478899999988654444453
No 166
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural protein; 1.75A {Gallus gallus}
Probab=21.28 E-value=48 Score=21.78 Aligned_cols=34 Identities=9% Similarity=0.202 Sum_probs=23.5
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.++||.|+++.. .-|+++.|++|.+-.+..+.|.
T Consensus 5 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~~~~Ww 38 (80)
T 2pqh_A 5 VLALYDYQEKSP-------------REVTMKKGDILTLLNSTNKDWW 38 (80)
T ss_dssp EEECSCBCCCST-------------TBCCBCTTCEEEEEECCSSSEE
T ss_pred EEECccCCCCCC-------------CccCCCCCCEEEEEEecCCCEE
Confidence 468888876532 2578888999988666545553
No 167
>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=20.90 E-value=52 Score=21.29 Aligned_cols=34 Identities=15% Similarity=0.292 Sum_probs=23.8
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|+++. -.-|+++.|++|.+-.+..+-|.
T Consensus 13 ~~al~dy~~~~-------------~~eLs~~~Gd~i~v~~~~~~~Ww 46 (76)
T 1ujy_A 13 VKARFNFKQTN-------------EDELSVCKGDIIYVTRVEEGGWW 46 (76)
T ss_dssp EECCSCBCCSS-------------TTSCCBCSSCCEEESSCCSSSCE
T ss_pred EEECccCCcCC-------------CCcccCCCCCEEEEEEecCCCEE
Confidence 46777777642 23578899999999776556564
No 168
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=20.81 E-value=84 Score=22.73 Aligned_cols=36 Identities=14% Similarity=0.354 Sum_probs=26.7
Q ss_pred eeEeecCcCC----c---ccchhhHHHHHH-HhCceEEEeeeCC
Q 029818 52 IAVFKSSLVG----W---DQDQLDVREILD-KYGFKSVYAFSTG 87 (187)
Q Consensus 52 vavFKs~LgG----~---eqDqLev~~Il~-k~gLKalfAf~p~ 87 (187)
+-.||.|+.+ | ..++.|+.++++ ++|++.|+-...+
T Consensus 22 ~i~~~~P~~~~~~~~~~~~~~~~~~~~ll~~~~gi~~Vi~l~~~ 65 (169)
T 1yn9_A 22 LICFKTPLRPELFAYVTSEEDVWTAEQIVKQNPSIGAIIDLTNT 65 (169)
T ss_dssp EEEECCCCCGGGGTTBCCGGGCCCHHHHHHHCTTEEEEEECCSC
T ss_pred eEEecCcchHhHhhcCCCcccCCCHHHHHhhCCCcCEEEEcCCC
Confidence 4456666542 1 267889999999 8999999988654
No 169
>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}
Probab=20.79 E-value=47 Score=21.15 Aligned_cols=33 Identities=12% Similarity=0.093 Sum_probs=22.0
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|+++.. .-|+++.|++|.+-.+. +.|.
T Consensus 14 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~-~~W~ 46 (74)
T 2m0y_A 14 GVAFYNYDARGA-------------DELSLQIGDTVHILETY-EGWY 46 (74)
T ss_dssp EEECSEECCCSS-------------SBCCEETTEEEEEEEBS-SSCE
T ss_pred EEEceeeCCCCc-------------CcccCCCCCEEEEEEcC-CCeE
Confidence 578888876532 23788889999885543 4453
No 170
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=20.78 E-value=2.2e+02 Score=19.80 Aligned_cols=49 Identities=12% Similarity=0.192 Sum_probs=35.5
Q ss_pred CeEEEEEE-EecC---CceeEeecCcCCcccc--hhhHHHHHHHhCceEEEeeeCC
Q 029818 38 PEVEIHLY-RRGE---GPIAVFKSSLVGWDQD--QLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 38 peVEV~Ly-rrGk---GPvavFKs~LgG~eqD--qLev~~Il~k~gLKalfAf~p~ 87 (187)
..+.++.+ ..|. +|.-||=-.++|...+ ...+...+.+.|+ .++++|..
T Consensus 21 ~g~~l~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~-~v~~~d~~ 75 (270)
T 3llc_A 21 DARSIAALVRAPAQDERPTCIWLGGYRSDMTGTKALEMDDLAASLGV-GAIRFDYS 75 (270)
T ss_dssp GCEEEEEEEECCSSTTSCEEEEECCTTCCTTSHHHHHHHHHHHHHTC-EEEEECCT
T ss_pred CcceEEEEeccCCCCCCCeEEEECCCccccccchHHHHHHHHHhCCC-cEEEeccc
Confidence 56677776 5677 8999998888776333 3357888888887 56788765
No 171
>1w1f_A Tyrosine-protein kinase LYN; SH3-domain, SH3 domain, tyrosine kinase, signal transduction; NMR {Homo sapiens} PDB: 1wa7_A
Probab=20.77 E-value=37 Score=21.12 Aligned_cols=32 Identities=16% Similarity=0.207 Sum_probs=22.2
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSM 123 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~ 123 (187)
.+++|.|+++.. .-|+++.|++|.+-.+. +.|
T Consensus 10 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~~-~~W 41 (65)
T 1w1f_A 10 VVALYPYDGIHP-------------DDLSFKKGEKMKVLEEH-GEW 41 (65)
T ss_dssp EEESSCBCCCSS-------------SCCCBCTTCEEEEEEEC-SSE
T ss_pred EEEceeECCcCC-------------CcCCCCCCCEEEEEEcC-CCE
Confidence 578888877632 24788999999885554 545
No 172
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}
Probab=20.56 E-value=40 Score=21.29 Aligned_cols=33 Identities=9% Similarity=0.224 Sum_probs=21.5
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSM 123 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~ 123 (187)
.+++|.|+++. -.-|+++.|++|.+=....+.|
T Consensus 9 ~~al~dy~~~~-------------~~eLs~~~Gd~i~v~~~~~~~W 41 (69)
T 4esr_A 9 VVALYDYTANR-------------SDELTIHRGDIIRVFFKDNEDW 41 (69)
T ss_dssp EEESSCBCCCS-------------TTBCCBCTTCEEEEEEECSSSE
T ss_pred EEECccCCCCC-------------cCcCCCCCCCEEEEEEecCCCe
Confidence 57888887652 2247888898888754433444
No 173
>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=20.32 E-value=53 Score=21.18 Aligned_cols=28 Identities=4% Similarity=0.208 Sum_probs=19.7
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCC
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGE 118 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGE 118 (187)
.+++|.|+++.. .-|+++.|++|.+-.+
T Consensus 13 ~~al~dy~~~~~-------------~eLs~~~Gd~i~v~~~ 40 (74)
T 1j3t_A 13 AQALCSWTAKKD-------------NHLNFSKHDIITVLEQ 40 (74)
T ss_dssp EEESSCBCCCST-------------TBCCBCTTCEEEEEEE
T ss_pred EEECCCCCCCCC-------------CccCCCCCCEEEEEec
Confidence 567888877532 1388899999988554
No 174
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A
Probab=20.28 E-value=48 Score=22.05 Aligned_cols=34 Identities=12% Similarity=0.340 Sum_probs=23.0
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCCCcc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQDSMI 124 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKdS~~ 124 (187)
.+++|.|+++. -.-|+++.|++|.+-.+..+.|.
T Consensus 8 ~~Alydy~~~~-------------~~eLs~~~Gd~i~vl~~~~~~Ww 41 (79)
T 3cqt_A 8 FEALYDYEART-------------EDDLSFHKGEKFQILNSSEGDWW 41 (79)
T ss_dssp EEESSCBCCCS-------------TTBCCBCTTCEEEEEECTTSSEE
T ss_pred EEECccCCCCC-------------cCcCCCCCCCEEEEEEecCCCeE
Confidence 57888887653 23588899999998554444553
No 175
>3sok_A Fimbrial protein; pilus subunit, extracellular, cell adhesion; 2.30A {Dichelobacter nodosus}
Probab=20.27 E-value=43 Score=24.94 Aligned_cols=27 Identities=11% Similarity=0.351 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHhcCChhHHHhcc
Q 029818 130 ILFGLTVITLLITLLFKDRPEWINKLN 156 (187)
Q Consensus 130 i~~gva~vtlmi~~~~k~~Pew~k~~~ 156 (187)
+++.++++++|++++++..-.++.+.+
T Consensus 6 llvviaIigiLaaia~p~~~~~~~~~~ 32 (151)
T 3sok_A 6 LMIVVAIIGILAAFAIPAYNDYIARSQ 32 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578888999999999888776665544
No 176
>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.16 E-value=44 Score=22.18 Aligned_cols=33 Identities=15% Similarity=0.160 Sum_probs=22.0
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCcCC-Cc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEPQD-SM 123 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEPKd-S~ 123 (187)
.+++|.|+++.. .-|+|+.|++|.+-.+..+ .|
T Consensus 20 ~~Alydy~~~~~-------------~eLsf~~Gd~i~v~~~~~~~~W 53 (81)
T 1x6g_A 20 CITKCEHTRPKP-------------GELAFRKGDVVTILEACENKSW 53 (81)
T ss_dssp EEESSCBSSCCT-------------TCCCBCTTCEEEEEECCCSSSE
T ss_pred EEECCCCCcCCC-------------CCCCCCCCCEEEEEeccCCCCe
Confidence 568888876532 2378999999998544333 45
No 177
>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.10 E-value=60 Score=20.86 Aligned_cols=29 Identities=21% Similarity=0.269 Sum_probs=20.9
Q ss_pred ceEEEeeeCCCccccceeecCCCCcccccccCCcEEEeCCCc
Q 029818 78 FKSVYAFSTGVGRGVPIRFNRRNGRSMLGYKDGSVVYMDGEP 119 (187)
Q Consensus 78 LKalfAf~p~~gRGv~irfnPrnG~SlL~Y~dgsvI~lDGEP 119 (187)
.+++|.|.++. -.-|+++.|++|.+-.+.
T Consensus 10 ~~al~dy~~~~-------------~~eLs~~~Gd~i~v~~~~ 38 (73)
T 2dm1_A 10 AVARYNFAARD-------------MRELSLREGDVVRIYSRI 38 (73)
T ss_dssp EEESSCBCCCS-------------TTBCCBCTTCEEECCBSS
T ss_pred EEECccCCcCC-------------CCcCCCCCCCEEEEEEec
Confidence 46777777652 235889999999987664
No 178
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=20.07 E-value=75 Score=27.55 Aligned_cols=51 Identities=29% Similarity=0.543 Sum_probs=37.3
Q ss_pred cCCeEEEEEEEec----CCceeEee-cCcCCcccchhhHHHHHHHhCceEEEeeeCC
Q 029818 36 KVPEVEIHLYRRG----EGPIAVFK-SSLVGWDQDQLDVREILDKYGFKSVYAFSTG 87 (187)
Q Consensus 36 ~~peVEV~LyrrG----kGPvavFK-s~LgG~eqDqLev~~Il~k~gLKalfAf~p~ 87 (187)
+.|.|. .+|.+| .|||.++. -++..|...--|+|.++++-|-+.|.||-..
T Consensus 109 ~HPgv~-~~~~~g~~~vgG~v~~l~~~~f~~~~~tP~e~r~~f~~~gw~~VvafqTr 164 (349)
T 1v47_A 109 THPGVA-RLYGKGPYALAGRVEVLKPRPRTPLEKTPEEVRAFFRQRGWRKVVAFQTR 164 (349)
T ss_dssp TSHHHH-HHHHTCSEEEEBCEEESSCCCCCTTCCCHHHHHHHHHHTTCCSEEEEEES
T ss_pred CCcchH-HHhhcCCEEEEEEEEEEEcCCchhhcCCHHHHHHHHHhcCCCeEEEeecC
Confidence 345554 345555 38888886 2355677788899999999999999998543
Done!