Query 029822
Match_columns 187
No_of_seqs 126 out of 1351
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 04:12:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029822.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029822hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 8.9E-35 1.9E-39 268.3 11.5 181 2-187 119-300 (571)
2 PF00854 PTR2: POT family; In 99.9 3.8E-29 8.3E-34 218.3 3.3 128 31-164 30-159 (372)
3 TIGR00926 2A1704 Peptide:H+ sy 99.9 2.9E-22 6.4E-27 187.8 11.1 122 33-160 84-212 (654)
4 COG3104 PTR2 Dipeptide/tripept 99.7 2.1E-18 4.5E-23 155.9 4.0 97 32-135 115-211 (498)
5 PRK10207 dipeptide/tripeptide 99.4 2.9E-13 6.2E-18 123.2 7.7 101 35-142 106-208 (489)
6 TIGR00924 yjdL_sub1_fam amino 99.3 2.9E-12 6.2E-17 115.9 7.1 101 34-140 102-202 (475)
7 PRK15462 dipeptide/tripeptide 99.3 5.1E-12 1.1E-16 115.6 6.7 94 35-135 101-194 (493)
8 PRK09584 tppB putative tripept 99.1 7.6E-11 1.7E-15 107.4 6.9 95 34-135 112-206 (500)
9 KOG1330 Sugar transporter/spin 98.7 1.5E-08 3.2E-13 91.7 4.9 119 32-159 119-246 (493)
10 TIGR00900 2A0121 H+ Antiporter 97.9 5E-05 1.1E-09 63.8 7.8 86 33-127 91-176 (365)
11 TIGR00710 efflux_Bcr_CflA drug 97.7 0.00022 4.7E-09 60.9 9.0 86 34-128 93-178 (385)
12 PF07690 MFS_1: Major Facilita 97.7 8.6E-05 1.9E-09 62.2 5.8 83 34-125 85-167 (352)
13 PRK15403 multidrug efflux syst 97.6 0.00021 4.6E-09 63.3 8.2 84 33-125 103-186 (413)
14 PRK11102 bicyclomycin/multidru 97.6 0.00024 5.2E-09 60.9 8.2 83 34-125 79-161 (377)
15 PRK05122 major facilitator sup 97.6 0.00013 2.8E-09 63.3 6.6 96 35-139 303-398 (399)
16 TIGR00926 2A1704 Peptide:H+ sy 97.6 0.00011 2.4E-09 69.7 6.5 121 33-159 81-208 (654)
17 TIGR00805 oat sodium-independe 97.6 0.0004 8.6E-09 65.6 9.8 86 33-127 171-278 (633)
18 PRK15402 multidrug efflux syst 97.6 0.00038 8.3E-09 60.7 8.5 84 34-126 101-184 (406)
19 PRK14995 methyl viologen resis 97.5 0.00027 5.8E-09 64.1 7.1 85 33-125 93-177 (495)
20 TIGR00903 2A0129 major facilit 97.5 0.00048 1E-08 60.5 8.4 85 33-127 78-163 (368)
21 TIGR00893 2A0114 d-galactonate 97.5 0.0003 6.4E-09 59.2 6.9 84 33-125 81-164 (399)
22 PRK03545 putative arabinose tr 97.5 0.00036 7.7E-09 60.7 7.1 84 33-125 96-179 (390)
23 TIGR00880 2_A_01_02 Multidrug 97.4 0.00042 9.2E-09 49.9 6.1 84 34-126 51-134 (141)
24 TIGR00711 efflux_EmrB drug res 97.4 0.00042 9.1E-09 61.4 7.2 84 33-125 89-172 (485)
25 TIGR00895 2A0115 benzoate tran 97.4 0.00058 1.3E-08 58.0 7.4 82 33-123 104-185 (398)
26 TIGR00879 SP MFS transporter, 97.4 0.00047 1E-08 59.8 6.7 84 34-126 127-213 (481)
27 PRK10213 nepI ribonucleoside t 97.4 0.00052 1.1E-08 60.3 6.9 83 33-124 107-189 (394)
28 PRK10489 enterobactin exporter 97.3 0.00075 1.6E-08 59.2 7.5 85 34-127 110-194 (417)
29 cd06174 MFS The Major Facilita 97.3 0.00056 1.2E-08 56.8 6.3 84 33-125 86-169 (352)
30 TIGR00901 2A0125 AmpG-related 97.3 0.0014 3.1E-08 55.9 9.0 86 33-127 82-175 (356)
31 PRK10473 multidrug efflux syst 97.3 0.0015 3.1E-08 56.7 8.4 83 34-125 91-173 (392)
32 PRK11551 putative 3-hydroxyphe 97.2 0.001 2.2E-08 57.8 7.3 83 33-124 102-184 (406)
33 PRK11663 regulatory protein Uh 97.2 0.001 2.2E-08 59.1 7.2 78 34-120 111-188 (434)
34 PRK11646 multidrug resistance 97.2 0.0012 2.5E-08 58.2 7.5 83 33-125 98-180 (400)
35 TIGR00894 2A0114euk Na(+)-depe 97.2 0.0019 4E-08 57.6 8.8 81 34-123 131-212 (465)
36 PRK12382 putative transporter; 97.2 0.001 2.2E-08 57.7 6.7 85 35-128 303-387 (392)
37 PRK06814 acylglycerophosphoeth 97.1 0.0014 3E-08 64.9 8.0 83 33-124 107-189 (1140)
38 PRK10504 putative transporter; 97.1 0.0025 5.4E-08 56.7 8.8 86 34-128 98-183 (471)
39 PRK11902 ampG muropeptide tran 97.1 0.0027 5.9E-08 55.6 8.7 85 33-126 93-178 (402)
40 PRK10406 alpha-ketoglutarate t 97.1 0.0012 2.7E-08 58.4 6.2 80 34-122 124-211 (432)
41 PRK12307 putative sialic acid 97.1 0.0013 2.9E-08 57.4 6.3 80 33-121 105-184 (426)
42 PRK10054 putative transporter; 97.1 0.0017 3.6E-08 57.1 6.9 79 37-125 99-177 (395)
43 PRK11652 emrD multidrug resist 97.0 0.0029 6.2E-08 54.9 8.1 80 34-122 96-175 (394)
44 PRK10091 MFS transport protein 97.0 0.0017 3.6E-08 56.5 6.6 84 33-125 90-173 (382)
45 PRK11010 ampG muropeptide tran 97.0 0.0038 8.3E-08 56.8 9.2 84 33-125 106-190 (491)
46 PRK09874 drug efflux system pr 97.0 0.00071 1.5E-08 58.5 4.1 85 35-128 312-396 (408)
47 PRK11043 putative transporter; 96.9 0.0026 5.7E-08 55.3 7.0 83 34-125 94-176 (401)
48 TIGR00881 2A0104 phosphoglycer 96.9 0.0013 2.9E-08 55.4 4.8 83 33-124 82-165 (379)
49 PRK03893 putative sialic acid 96.9 0.0024 5.1E-08 57.1 6.4 81 33-122 107-187 (496)
50 TIGR02332 HpaX 4-hydroxyphenyl 96.9 0.0028 6E-08 56.0 6.7 79 34-121 96-180 (412)
51 TIGR00891 2A0112 putative sial 96.9 0.0032 6.9E-08 53.8 6.8 83 33-124 99-183 (405)
52 cd06174 MFS The Major Facilita 96.8 0.0047 1E-07 51.2 7.4 84 34-126 265-348 (352)
53 TIGR00899 2A0120 sugar efflux 96.8 0.0042 9.2E-08 52.8 7.2 83 36-125 89-171 (375)
54 KOG3764 Vesicular amine transp 96.8 0.0026 5.6E-08 57.4 5.9 108 33-148 158-268 (464)
55 PRK12382 putative transporter; 96.7 0.005 1.1E-07 53.4 7.1 77 33-118 111-187 (392)
56 TIGR00883 2A0106 metabolite-pr 96.7 0.0064 1.4E-07 51.4 7.5 82 35-125 97-186 (394)
57 TIGR00890 2A0111 Oxalate/Forma 96.7 0.0029 6.2E-08 53.3 5.0 79 37-124 298-376 (377)
58 PRK03699 putative transporter; 96.7 0.0076 1.6E-07 52.6 7.8 84 33-125 94-178 (394)
59 TIGR00712 glpT glycerol-3-phos 96.7 0.005 1.1E-07 54.7 6.7 81 34-123 118-199 (438)
60 PRK10642 proline/glycine betai 96.6 0.0039 8.4E-08 56.4 5.8 79 36-123 120-206 (490)
61 PRK09874 drug efflux system pr 96.6 0.0061 1.3E-07 52.7 6.8 82 34-125 107-188 (408)
62 TIGR00892 2A0113 monocarboxyla 96.6 0.0045 9.8E-08 55.5 6.0 76 42-127 116-191 (455)
63 TIGR00788 fbt folate/biopterin 96.6 0.0051 1.1E-07 55.8 6.3 80 39-125 125-204 (468)
64 TIGR00890 2A0111 Oxalate/Forma 96.6 0.0067 1.4E-07 51.0 6.7 82 33-124 90-171 (377)
65 PRK09705 cynX putative cyanate 96.6 0.0048 1E-07 54.0 6.0 82 34-125 97-179 (393)
66 TIGR00889 2A0110 nucleoside tr 96.6 0.0048 1E-07 54.9 6.0 83 34-125 308-397 (418)
67 TIGR01301 GPH_sucrose GPH fami 96.6 0.0077 1.7E-07 55.3 7.3 91 35-132 115-220 (477)
68 TIGR00893 2A0114 d-galactonate 96.6 0.0094 2E-07 50.1 7.4 77 42-127 319-396 (399)
69 COG2814 AraJ Arabinose efflux 96.5 0.0053 1.2E-07 55.1 6.1 91 32-131 99-189 (394)
70 PRK10077 xylE D-xylose transpo 96.5 0.0075 1.6E-07 53.5 7.0 84 33-125 119-210 (479)
71 PRK05122 major facilitator sup 96.5 0.011 2.3E-07 51.3 7.8 79 34-121 112-190 (399)
72 TIGR00899 2A0120 sugar efflux 96.4 0.007 1.5E-07 51.5 5.8 80 38-127 292-371 (375)
73 TIGR00892 2A0113 monocarboxyla 96.4 0.01 2.3E-07 53.2 7.2 85 35-128 334-419 (455)
74 PRK15011 sugar efflux transpor 96.3 0.011 2.4E-07 51.6 6.8 69 50-125 121-189 (393)
75 PRK03633 putative MFS family t 96.3 0.014 3E-07 50.6 7.0 76 39-123 290-365 (381)
76 TIGR00898 2A0119 cation transp 96.3 0.024 5.2E-07 50.9 8.8 81 34-126 180-260 (505)
77 TIGR00896 CynX cyanate transpo 96.3 0.011 2.3E-07 50.6 6.2 82 34-125 87-170 (355)
78 PRK10489 enterobactin exporter 96.3 0.01 2.3E-07 51.9 6.2 81 37-126 315-395 (417)
79 TIGR00887 2A0109 phosphate:H+ 96.2 0.014 3.1E-07 52.8 6.8 82 34-124 115-219 (502)
80 TIGR01272 gluP glucose/galacto 96.2 0.013 2.8E-07 50.3 6.1 83 32-123 8-107 (310)
81 TIGR00886 2A0108 nitrite extru 96.1 0.026 5.6E-07 47.9 7.6 75 33-117 90-175 (366)
82 PRK09952 shikimate transporter 96.1 0.014 3E-07 52.0 6.0 78 36-122 127-212 (438)
83 COG2271 UhpC Sugar phosphate p 96.1 0.0049 1.1E-07 55.8 3.1 79 45-132 128-209 (448)
84 PRK11128 putative 3-phenylprop 96.0 0.012 2.5E-07 51.2 5.1 81 34-125 94-174 (382)
85 PRK03545 putative arabinose tr 96.0 0.028 6E-07 48.8 7.3 87 35-131 295-381 (390)
86 PRK11195 lysophospholipid tran 95.9 0.031 6.6E-07 49.1 7.6 77 38-124 92-168 (393)
87 TIGR00902 2A0127 phenyl propri 95.9 0.013 2.9E-07 50.9 5.2 83 33-126 93-175 (382)
88 TIGR00885 fucP L-fucose:H+ sym 95.9 0.024 5.2E-07 50.4 6.8 85 33-126 93-203 (410)
89 PRK11273 glpT sn-glycerol-3-ph 95.9 0.026 5.5E-07 50.4 7.0 79 34-121 120-199 (452)
90 TIGR00879 SP MFS transporter, 95.8 0.044 9.6E-07 47.4 7.9 67 51-126 400-466 (481)
91 PRK08633 2-acyl-glycerophospho 95.7 0.037 8E-07 54.6 7.9 63 34-105 103-165 (1146)
92 PRK15075 citrate-proton sympor 95.7 0.028 6.2E-07 49.8 6.4 74 36-118 119-200 (434)
93 TIGR00792 gph sugar (Glycoside 95.6 0.061 1.3E-06 47.0 8.1 84 35-126 100-190 (437)
94 TIGR00924 yjdL_sub1_fam amino 95.5 0.026 5.6E-07 51.3 5.6 93 32-133 379-471 (475)
95 PRK09705 cynX putative cyanate 95.5 0.034 7.4E-07 48.7 6.2 78 43-128 301-379 (393)
96 TIGR00897 2A0118 polyol permea 95.5 0.1 2.3E-06 45.6 9.2 74 34-116 105-179 (402)
97 TIGR01299 synapt_SV2 synaptic 95.4 0.03 6.4E-07 54.2 5.8 85 33-126 254-351 (742)
98 PRK09528 lacY galactoside perm 95.2 0.018 3.8E-07 50.6 3.5 81 36-125 317-398 (420)
99 PRK03633 putative MFS family t 95.2 0.094 2E-06 45.4 7.9 72 33-113 93-164 (381)
100 PRK10133 L-fucose transporter; 95.1 0.094 2E-06 47.0 7.8 60 33-101 116-175 (438)
101 PRK15011 sugar efflux transpor 95.1 0.039 8.5E-07 48.2 5.1 52 77-128 338-389 (393)
102 PRK03699 putative transporter; 94.8 0.027 5.8E-07 49.1 3.3 77 38-124 298-374 (394)
103 TIGR00792 gph sugar (Glycoside 94.7 0.082 1.8E-06 46.2 6.2 72 35-109 312-384 (437)
104 KOG2533 Permease of the major 94.6 0.096 2.1E-06 48.4 6.6 84 34-126 134-224 (495)
105 PRK11663 regulatory protein Uh 94.6 0.07 1.5E-06 47.3 5.5 52 75-126 369-420 (434)
106 PRK11273 glpT sn-glycerol-3-ph 94.4 0.05 1.1E-06 48.5 4.2 51 75-125 379-430 (452)
107 PF05977 MFS_3: Transmembrane 94.4 0.11 2.3E-06 48.3 6.5 91 32-131 101-191 (524)
108 TIGR01299 synapt_SV2 synaptic 94.4 0.075 1.6E-06 51.4 5.6 72 45-126 659-730 (742)
109 TIGR02718 sider_RhtX_FptX side 94.4 0.24 5.2E-06 42.9 8.3 51 77-127 131-181 (390)
110 PRK09669 putative symporter Ya 94.3 0.09 1.9E-06 46.7 5.6 73 34-109 319-392 (444)
111 PRK03893 putative sialic acid 94.3 0.11 2.4E-06 46.4 6.1 59 52-119 384-442 (496)
112 PLN00028 nitrate transmembrane 94.2 0.097 2.1E-06 47.3 5.6 80 34-123 124-212 (476)
113 PRK09556 uhpT sugar phosphate 94.1 0.033 7.2E-07 49.9 2.3 87 33-128 121-211 (467)
114 KOG3626 Organic anion transpor 94.0 0.43 9.4E-06 46.2 9.8 93 33-134 236-347 (735)
115 TIGR00891 2A0112 putative sial 94.0 0.072 1.6E-06 45.4 4.2 73 36-117 330-403 (405)
116 PRK10077 xylE D-xylose transpo 93.8 0.5 1.1E-05 41.8 9.3 66 51-125 381-452 (479)
117 PRK10054 putative transporter; 93.7 0.12 2.6E-06 45.3 5.2 92 37-142 301-392 (395)
118 PRK09669 putative symporter Ya 93.6 0.33 7.1E-06 43.1 7.9 84 34-125 109-199 (444)
119 PRK11551 putative 3-hydroxyphe 93.6 0.18 4E-06 43.6 6.1 80 37-125 311-391 (406)
120 TIGR00897 2A0118 polyol permea 93.0 0.25 5.5E-06 43.2 6.0 79 36-125 318-396 (402)
121 PF11700 ATG22: Vacuole efflux 92.9 0.29 6.2E-06 44.9 6.4 86 34-128 380-466 (477)
122 PRK11010 ampG muropeptide tran 92.7 0.27 5.9E-06 44.7 6.0 68 53-129 335-402 (491)
123 PRK10213 nepI ribonucleoside t 92.5 0.42 9E-06 41.9 6.7 78 35-122 306-383 (394)
124 TIGR00881 2A0104 phosphoglycer 92.4 0.21 4.5E-06 41.9 4.5 56 48-112 324-379 (379)
125 KOG1237 H+/oligopeptide sympor 92.2 0.23 4.9E-06 46.8 4.9 104 34-158 59-163 (571)
126 PRK15034 nitrate/nitrite trans 92.2 0.49 1.1E-05 43.4 7.0 86 33-128 127-230 (462)
127 PF03137 OATP: Organic Anion T 91.9 0.044 9.6E-07 51.0 -0.1 92 33-133 140-253 (539)
128 PRK09952 shikimate transporter 91.8 0.52 1.1E-05 41.9 6.6 81 39-128 348-431 (438)
129 PRK09556 uhpT sugar phosphate 91.8 0.53 1.2E-05 42.1 6.7 53 75-127 381-446 (467)
130 PF06609 TRI12: Fungal trichot 91.6 0.67 1.5E-05 43.9 7.4 83 33-125 130-212 (599)
131 KOG2532 Permease of the major 91.4 0.59 1.3E-05 42.9 6.6 75 36-119 130-205 (466)
132 PF13347 MFS_2: MFS/sugar tran 91.3 0.43 9.4E-06 42.1 5.5 92 33-132 102-200 (428)
133 TIGR00882 2A0105 oligosacchari 91.3 0.88 1.9E-05 39.5 7.4 72 41-124 106-177 (396)
134 TIGR02718 sider_RhtX_FptX side 91.2 0.41 8.8E-06 41.5 5.2 70 47-124 316-385 (390)
135 PRK11646 multidrug resistance 91.1 0.26 5.6E-06 43.3 3.9 78 38-124 301-382 (400)
136 PLN00028 nitrate transmembrane 91.1 0.37 8E-06 43.5 4.9 53 77-130 381-433 (476)
137 PRK11462 putative transporter; 91.0 1.4 3.1E-05 39.7 8.6 83 37-127 112-201 (460)
138 PF03092 BT1: BT1 family; Int 90.8 1.9 4E-05 38.9 9.1 80 38-124 90-169 (433)
139 PRK09848 glucuronide transport 90.5 0.54 1.2E-05 41.7 5.4 72 34-108 319-391 (448)
140 TIGR02332 HpaX 4-hydroxyphenyl 90.5 0.46 9.9E-06 41.9 4.9 45 75-119 365-410 (412)
141 KOG0254 Predicted transporter 90.5 0.9 2E-05 41.4 6.9 77 33-118 141-218 (513)
142 COG2807 CynX Cyanate permease 90.4 0.65 1.4E-05 41.7 5.6 87 33-129 98-185 (395)
143 TIGR00883 2A0106 metabolite-pr 90.4 0.14 3.1E-06 43.2 1.5 76 35-119 313-390 (394)
144 PF13347 MFS_2: MFS/sugar tran 90.4 0.68 1.5E-05 40.9 5.9 75 32-109 313-388 (428)
145 PRK09528 lacY galactoside perm 90.1 0.43 9.3E-06 41.9 4.4 48 80-128 142-189 (420)
146 TIGR00900 2A0121 H+ Antiporter 89.9 0.51 1.1E-05 39.4 4.5 65 34-107 301-365 (365)
147 TIGR00894 2A0114euk Na(+)-depe 89.9 0.92 2E-05 40.3 6.3 54 75-128 392-448 (465)
148 TIGR00902 2A0127 phenyl propri 89.8 0.92 2E-05 39.3 6.2 82 33-125 292-374 (382)
149 TIGR00712 glpT glycerol-3-phos 89.8 0.32 6.8E-06 43.1 3.3 52 76-127 378-430 (438)
150 TIGR00887 2A0109 phosphate:H+ 88.8 2.6 5.5E-05 38.2 8.5 50 75-124 424-483 (502)
151 COG0738 FucP Fucose permease [ 88.7 1 2.2E-05 40.8 5.6 100 31-139 101-220 (422)
152 KOG0255 Synaptic vesicle trans 88.6 2 4.4E-05 38.9 7.7 81 33-125 170-250 (521)
153 TIGR01272 gluP glucose/galacto 88.0 0.56 1.2E-05 40.1 3.5 70 39-119 235-304 (310)
154 PRK10429 melibiose:sodium symp 87.9 1 2.2E-05 40.6 5.2 72 34-108 324-396 (473)
155 PRK10642 proline/glycine betai 87.8 1.5 3.2E-05 39.6 6.3 75 35-118 343-418 (490)
156 PRK10429 melibiose:sodium symp 87.7 2.7 5.8E-05 37.8 7.9 82 38-127 110-198 (473)
157 TIGR00882 2A0105 oligosacchari 87.3 0.45 9.8E-06 41.3 2.6 46 80-125 344-390 (396)
158 PF05977 MFS_3: Transmembrane 87.0 1.3 2.8E-05 41.2 5.5 54 75-128 339-392 (524)
159 PRK15402 multidrug efflux syst 86.9 2.1 4.5E-05 37.2 6.5 72 35-116 310-381 (406)
160 PRK11652 emrD multidrug resist 86.8 2.2 4.7E-05 36.9 6.5 73 35-117 300-372 (394)
161 TIGR00806 rfc RFC reduced fola 86.7 2.1 4.6E-05 39.8 6.6 82 33-125 114-198 (511)
162 TIGR00898 2A0119 cation transp 86.4 1.3 2.9E-05 39.6 5.1 68 46-124 422-489 (505)
163 PRK09584 tppB putative tripept 86.0 1.4 2.9E-05 40.4 5.1 90 32-130 380-479 (500)
164 PRK10091 MFS transport protein 85.7 2.4 5.3E-05 36.6 6.3 41 85-125 330-371 (382)
165 PRK06814 acylglycerophosphoeth 85.2 1.3 2.8E-05 44.2 4.8 76 34-118 334-410 (1140)
166 COG2223 NarK Nitrate/nitrite t 84.7 2.2 4.8E-05 38.7 5.6 85 37-132 108-195 (417)
167 PRK08633 2-acyl-glycerophospho 84.5 2.1 4.6E-05 42.3 6.0 76 34-118 322-398 (1146)
168 PF03209 PUCC: PUCC protein; 84.0 9.4 0.0002 34.6 9.3 96 31-135 86-185 (403)
169 COG2814 AraJ Arabinose efflux 83.8 4.5 9.7E-05 36.5 7.2 59 77-135 333-391 (394)
170 KOG2504 Monocarboxylate transp 83.5 1.5 3.3E-05 40.6 4.2 79 43-130 397-476 (509)
171 PRK11902 ampG muropeptide tran 83.1 2.6 5.6E-05 36.7 5.3 45 82-126 342-386 (402)
172 PRK15075 citrate-proton sympor 82.9 1.9 4.1E-05 38.1 4.4 60 41-109 338-398 (434)
173 PRK11128 putative 3-phenylprop 82.5 3.1 6.8E-05 35.9 5.6 79 34-123 293-372 (382)
174 PRK12307 putative sialic acid 82.2 3.5 7.5E-05 35.8 5.8 51 52-111 339-389 (426)
175 TIGR00895 2A0115 benzoate tran 82.0 2.2 4.8E-05 36.0 4.4 59 35-102 339-397 (398)
176 TIGR00710 efflux_Bcr_CflA drug 81.9 4 8.7E-05 34.5 6.0 71 36-117 302-373 (385)
177 PRK10504 putative transporter; 81.1 2.8 6E-05 37.2 4.8 62 38-108 357-418 (471)
178 PTZ00207 hypothetical protein; 78.7 3.7 8.1E-05 38.9 5.1 82 33-126 119-202 (591)
179 TIGR00903 2A0129 major facilit 78.5 3.8 8.2E-05 35.8 4.8 67 48-125 294-360 (368)
180 TIGR00885 fucP L-fucose:H+ sym 78.3 2.2 4.8E-05 37.8 3.3 73 38-121 325-403 (410)
181 PRK09848 glucuronide transport 78.2 8.9 0.00019 33.9 7.2 60 34-101 109-173 (448)
182 PRK11043 putative transporter; 78.0 6.8 0.00015 33.8 6.2 67 36-112 298-364 (401)
183 PRK11195 lysophospholipid tran 77.5 7.1 0.00015 34.1 6.3 79 38-125 297-375 (393)
184 PRK10133 L-fucose transporter; 76.5 2.8 6.1E-05 37.5 3.5 76 38-124 351-427 (438)
185 PRK10207 dipeptide/tripeptide 74.6 4.9 0.00011 36.7 4.6 92 33-133 378-479 (489)
186 COG2211 MelB Na+/melibiose sym 74.1 21 0.00045 33.0 8.4 84 33-124 111-201 (467)
187 PTZ00207 hypothetical protein; 73.9 5.4 0.00012 37.8 4.7 81 35-125 453-547 (591)
188 PF05631 DUF791: Protein of un 73.5 12 0.00025 33.4 6.4 121 31-155 118-241 (354)
189 PRK10406 alpha-ketoglutarate t 72.8 7 0.00015 34.5 5.0 65 53-127 355-421 (432)
190 TIGR00896 CynX cyanate transpo 71.1 6.9 0.00015 33.2 4.4 59 41-107 292-350 (355)
191 PF07690 MFS_1: Major Facilita 70.9 5.9 0.00013 32.8 3.9 55 33-96 298-352 (352)
192 PF14007 YtpI: YtpI-like prote 70.6 4 8.7E-05 29.2 2.4 51 87-138 36-86 (89)
193 PRK11462 putative transporter; 69.6 11 0.00024 34.0 5.6 69 37-108 321-390 (460)
194 KOG2504 Monocarboxylate transp 66.5 9.9 0.00022 35.2 4.7 81 34-124 134-215 (509)
195 PF00083 Sugar_tr: Sugar (and 65.8 0.34 7.4E-06 42.6 -4.8 81 33-122 101-184 (451)
196 TIGR00769 AAA ADP/ATP carrier 65.5 28 0.00061 32.1 7.4 38 57-103 152-189 (472)
197 PF03825 Nuc_H_symport: Nucleo 64.4 16 0.00035 32.6 5.6 81 40-129 307-394 (400)
198 KOG2532 Permease of the major 64.3 8 0.00017 35.5 3.6 50 79-128 393-445 (466)
199 KOG0254 Predicted transporter 64.1 42 0.00092 30.5 8.3 95 31-129 42-139 (513)
200 PF06645 SPC12: Microsomal sig 62.6 11 0.00024 25.9 3.3 54 80-136 9-62 (76)
201 COG0477 ProP Permeases of the 55.9 33 0.00072 26.4 5.5 78 34-119 94-174 (338)
202 COG2211 MelB Na+/melibiose sym 55.7 32 0.00069 31.8 5.9 71 32-105 325-396 (467)
203 KOG4686 Predicted sugar transp 55.5 26 0.00057 31.2 5.1 75 38-121 356-433 (459)
204 TIGR00711 efflux_EmrB drug res 54.8 14 0.00031 32.5 3.5 63 34-105 348-410 (485)
205 COG2270 Permeases of the major 53.5 15 0.00032 33.7 3.3 78 42-128 349-427 (438)
206 TIGR00769 AAA ADP/ATP carrier 52.4 27 0.00058 32.2 5.0 58 57-122 289-346 (472)
207 KOG3764 Vesicular amine transp 51.8 14 0.00031 33.9 3.0 92 39-133 366-457 (464)
208 TIGR00788 fbt folate/biopterin 49.8 37 0.00079 30.7 5.4 50 76-125 384-438 (468)
209 COG2271 UhpC Sugar phosphate p 49.2 18 0.00039 33.2 3.2 41 88-128 391-432 (448)
210 PRK15403 multidrug efflux syst 49.2 57 0.0012 28.7 6.4 28 37-64 315-342 (413)
211 KOG0252 Inorganic phosphate tr 49.1 24 0.00051 33.1 3.9 51 82-134 87-137 (538)
212 KOG0252 Inorganic phosphate tr 45.7 40 0.00088 31.6 4.9 68 73-146 436-508 (538)
213 KOG0253 Synaptic vesicle trans 43.2 1.8E+02 0.0039 26.9 8.5 112 37-162 169-282 (528)
214 KOG0569 Permease of the major 42.2 59 0.0013 30.2 5.5 85 33-126 115-201 (485)
215 PF11027 DUF2615: Protein of u 41.5 30 0.00064 25.5 2.8 28 109-136 53-80 (103)
216 PF03988 DUF347: Repeat of Unk 41.3 40 0.00086 21.6 3.1 33 84-118 2-35 (55)
217 PRK11102 bicyclomycin/multidru 41.1 98 0.0021 26.1 6.4 38 89-128 333-370 (377)
218 PRK14995 methyl viologen resis 40.1 45 0.00098 30.1 4.4 60 36-104 353-412 (495)
219 TIGR00886 2A0108 nitrite extru 39.7 69 0.0015 26.8 5.2 41 82-122 40-80 (366)
220 COG2807 CynX Cyanate permease 39.5 54 0.0012 29.7 4.6 84 41-135 303-391 (395)
221 PF03219 TLC: TLC ATP/ADP tran 36.6 71 0.0015 29.7 5.1 64 55-126 303-366 (491)
222 PF11700 ATG22: Vacuole efflux 36.2 1.2E+02 0.0026 27.8 6.6 79 78-156 187-276 (477)
223 PF07332 DUF1469: Protein of u 35.7 76 0.0017 23.0 4.3 27 109-135 72-99 (121)
224 TIGR00889 2A0110 nucleoside tr 34.6 67 0.0014 28.3 4.5 34 89-123 140-173 (418)
225 COG4327 Predicted membrane pro 33.1 57 0.0012 23.6 3.1 25 136-160 56-80 (101)
226 PF01306 LacY_symp: LacY proto 32.9 81 0.0018 28.6 4.8 60 56-124 334-394 (412)
227 PF10112 Halogen_Hydrol: 5-bro 32.9 87 0.0019 25.0 4.6 15 83-97 10-24 (199)
228 PF00083 Sugar_tr: Sugar (and 32.5 12 0.00026 32.8 -0.6 83 50-146 365-447 (451)
229 KOG4112 Signal peptidase subun 31.4 41 0.0009 24.4 2.1 51 82-135 26-76 (101)
230 KOG0569 Permease of the major 29.6 1.5E+02 0.0032 27.6 6.0 52 75-126 56-107 (485)
231 PF05978 UNC-93: Ion channel r 28.3 1.6E+02 0.0036 22.8 5.3 56 34-98 89-144 (156)
232 PF14045 YIEGIA: YIEGIA protei 28.0 53 0.0012 28.4 2.6 69 27-95 24-120 (285)
233 PF03209 PUCC: PUCC protein; 26.4 2.3E+02 0.005 25.8 6.5 85 33-126 300-394 (403)
234 TIGR00880 2_A_01_02 Multidrug 25.7 35 0.00076 23.6 1.0 19 92-110 11-29 (141)
235 KOG2447 Oligosaccharyltransfer 24.9 90 0.002 27.0 3.4 61 73-134 191-260 (287)
236 PF12670 DUF3792: Protein of u 24.8 2E+02 0.0043 21.1 4.9 46 80-125 38-84 (116)
237 PF06814 Lung_7-TM_R: Lung sev 24.7 2.3E+02 0.0051 23.9 6.0 25 32-56 124-148 (295)
238 KOG0637 Sucrose transporter an 24.1 95 0.0021 29.0 3.6 66 29-102 137-202 (498)
239 PRK10473 multidrug efflux syst 23.7 2.1E+02 0.0045 24.4 5.6 41 82-122 41-81 (392)
240 KOG4332 Predicted sugar transp 23.7 1.6E+02 0.0035 26.2 4.7 79 35-125 345-426 (454)
241 KOG2816 Predicted transporter 23.1 1.9E+02 0.0042 26.5 5.5 63 76-138 145-209 (463)
242 PF11151 DUF2929: Protein of u 23.0 2.2E+02 0.0048 18.4 4.5 35 84-118 7-41 (57)
243 PRK03612 spermidine synthase; 21.5 1.2E+02 0.0026 28.2 3.9 51 80-130 146-198 (521)
244 COG0738 FucP Fucose permease [ 21.0 63 0.0014 29.5 1.9 84 39-134 329-413 (422)
245 PF11833 DUF3353: Protein of u 20.6 2.8E+02 0.0061 22.5 5.4 31 75-105 137-167 (194)
246 PF13937 DUF4212: Domain of un 20.5 2.3E+02 0.0049 19.8 4.2 21 105-125 41-61 (81)
247 PF12650 DUF3784: Domain of un 20.3 1.8E+02 0.0039 20.3 3.8 23 75-97 40-62 (97)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=8.9e-35 Score=268.26 Aligned_cols=181 Identities=38% Similarity=0.633 Sum_probs=160.6
Q ss_pred eeeehhhhcCCCCCCCCCCC-CCCCCCCCCchhHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHH
Q 029822 2 VLLWLTTIFPHARPLACDHP-LRDGCESATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSY 80 (187)
Q Consensus 2 ~ll~~sa~~~~~~p~~c~~~-~~~~c~~~~~~~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~ 80 (187)
++||+++.+|.++|++|... ....|..++..|..++|.+|+++++|+||+|||+.+||+||||+.+++++ +.+.+|
T Consensus 119 ~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~---~~~~~f 195 (571)
T KOG1237|consen 119 FGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEV---KGIPSF 195 (571)
T ss_pred HHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchh---hCcccc
Confidence 57899999999999998211 14579999999999999999999999999999999999999998887666 778899
Q ss_pred HHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHHHHHhcCCceeecCCCCChhHHHHHHHHHHHHhcCCC
Q 029822 81 FSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALCFFLASPFYVKSKANTSLLSGLIQVLVASYKNRHIK 160 (187)
Q Consensus 81 F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~f~~g~~~y~~~~p~gs~l~~~~~v~~~a~~~~~~~ 160 (187)
|||||+.+|+|.+++.++.+|+|++.||.+||++++++|++++++|+.|++.|+.++|.|||+++++||++++++||+..
T Consensus 196 FnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~~k~~~~ 275 (571)
T KOG1237|consen 196 FNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAAFKRKAV 275 (571)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccccccCCCccccCCCCCCC
Q 029822 161 LSSPQAAEERYHHREGSVRLVPSENLR 187 (187)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (187)
++.++ +++++........+||++||
T Consensus 276 ~~~~~--~~~~~~~~~~~~~~~t~~f~ 300 (571)
T KOG1237|consen 276 VSLDP--EELYYDCTDSVAIEGTKPFR 300 (571)
T ss_pred CCCcc--hhccccccccccccCCcccc
Confidence 99986 45422222334456666665
No 2
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.95 E-value=3.8e-29 Score=218.29 Aligned_cols=128 Identities=38% Similarity=0.718 Sum_probs=106.0
Q ss_pred chhHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcce
Q 029822 31 GSQLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKV 110 (187)
Q Consensus 31 ~~~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~ 110 (187)
+.+.+++|+||+++++|+|++|||+++|++|||+++++ ++++++|+||||++|+|++++.++.+|+|+++||.+
T Consensus 30 ~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~------~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~ 103 (372)
T PF00854_consen 30 GIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDD------SRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFL 103 (372)
T ss_dssp ----CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTT------THHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHH
T ss_pred hHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccch------hhhhhhHHHHHHHHhhhhHhhcccchhhccccchhh
Confidence 56789999999999999999999999999999998753 589999999999999999999999999999999999
Q ss_pred ehhhhHHHHHHHHHHHHhcCCceeec-CCCCChhHH-HHHHHHHHHHhcCCCCCCC
Q 029822 111 GFGIPAAIMLLSALCFFLASPFYVKS-KANTSLLSG-LIQVLVASYKNRHIKLSSP 164 (187)
Q Consensus 111 gF~i~~v~~~val~~f~~g~~~y~~~-~p~gs~l~~-~~~v~~~a~~~~~~~~~~~ 164 (187)
+|++++++|++++++|+.++++|++. +|.|+++++ ...++.++.++++...|.+
T Consensus 104 ~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (372)
T PF00854_consen 104 GFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFIKLVLVAAFKKRKLAVPKG 159 (372)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--SHHHHHHHHHHHCCCH-HH
T ss_pred hhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhHHHHHHHHHHHhhcccccc
Confidence 99999999999999999999999998 899999999 7777778888888887644
No 3
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.87 E-value=2.9e-22 Score=187.82 Aligned_cols=122 Identities=27% Similarity=0.586 Sum_probs=111.5
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheecc------
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNL------ 106 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~------ 106 (187)
+..+++++|+++++|+|++|||+.++++|||++++. ++++++|+|||+++|+|++++.++++|+++++
T Consensus 84 ~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~------~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~ 157 (654)
T TIGR00926 84 HDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL------SLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQ 157 (654)
T ss_pred HHHHHHHHHHHHHhhccccccCchhhhHhhcCccch------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC
Confidence 456788999999999999999999999999987543 57999999999999999999999999999654
Q ss_pred -CcceehhhhHHHHHHHHHHHHhcCCceeecCCCCChhHHHHHHHHHHHHhcCCC
Q 029822 107 -GWKVGFGIPAAIMLLSALCFFLASPFYVKSKANTSLLSGLIQVLVASYKNRHIK 160 (187)
Q Consensus 107 -gw~~gF~i~~v~~~val~~f~~g~~~y~~~~p~gs~l~~~~~v~~~a~~~~~~~ 160 (187)
||+++|++++++|++++++|+.++++|++.+|.|+++.+++++++.++++|...
T Consensus 158 ~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~ 212 (654)
T TIGR00926 158 DCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFST 212 (654)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhcc
Confidence 799999999999999999999999999999999999999999999999876543
No 4
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.72 E-value=2.1e-18 Score=155.85 Aligned_cols=97 Identities=25% Similarity=0.432 Sum_probs=92.4
Q ss_pred hhHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCccee
Q 029822 32 SQLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVG 111 (187)
Q Consensus 32 ~~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~g 111 (187)
.....+|+||.+|++|+|++|||++++++|||+++|+ +||..|+.||+++|+|+++++..++++++++||+.+
T Consensus 115 ~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dp-------rrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~g 187 (498)
T COG3104 115 SGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDP-------RRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVG 187 (498)
T ss_pred ccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCc-------ccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHH
Confidence 3467899999999999999999999999999999998 489999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhcCCceee
Q 029822 112 FGIPAAIMLLSALCFFLASPFYVK 135 (187)
Q Consensus 112 F~i~~v~~~val~~f~~g~~~y~~ 135 (187)
|++++++|.+++++|+++++.+..
T Consensus 188 F~~aavGm~~gl~~f~~~~r~~~~ 211 (498)
T COG3104 188 FGLAAVGMIIGLVIFLLGRRHVKG 211 (498)
T ss_pred HHHHHHHHHHHHHHHHHccchhcC
Confidence 999999999999999999988865
No 5
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.43 E-value=2.9e-13 Score=123.15 Aligned_cols=101 Identities=19% Similarity=0.443 Sum_probs=87.5
Q ss_pred HHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhh
Q 029822 35 MLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGI 114 (187)
Q Consensus 35 ~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i 114 (187)
.++++++.++++|+|++|||..++++|||++++ +++++.|+++|+++|+|+++++++.+++++++||+++|.+
T Consensus 106 ~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~-------~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i 178 (489)
T PRK10207 106 DLIFIALGTIAVGNGLFKANPASLLSKCYPPKD-------PRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNL 178 (489)
T ss_pred hHHHHHHHHHHhccccccCCHHHHHHHhcCCCc-------hhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHH
Confidence 346789999999999999999999999998655 3567799999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCceeec--CCCCCh
Q 029822 115 PAAIMLLSALCFFLASPFYVKS--KANTSL 142 (187)
Q Consensus 115 ~~v~~~val~~f~~g~~~y~~~--~p~gs~ 142 (187)
+.+++.++++.++.+++.+++. +|.+++
T Consensus 179 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (489)
T PRK10207 179 CGAGLIIALLVYFACRGMVKDIGSEPDHKP 208 (489)
T ss_pred HHHHHHHHHHHHHHcchhhcccCCCCCccc
Confidence 9999999999998888777553 344433
No 6
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.32 E-value=2.9e-12 Score=115.95 Aligned_cols=101 Identities=23% Similarity=0.439 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFG 113 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~ 113 (187)
...+++++.++++|+|+++|+..++++|+|+++++ .+++..|+++|+++|+|+++++.+.+++++++||+.+|.
T Consensus 102 ~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~------~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~ 175 (475)
T TIGR00924 102 PDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDM------PRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFN 175 (475)
T ss_pred HhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCc------ccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHH
Confidence 45677888899999999999999999999987653 356779999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhcCCceeecCCCC
Q 029822 114 IPAAIMLLSALCFFLASPFYVKSKANT 140 (187)
Q Consensus 114 i~~v~~~val~~f~~g~~~y~~~~p~g 140 (187)
++++.+++++++++..++.|++.++++
T Consensus 176 ~~~~~~~~~~l~~~~~~~~~~~~~~~~ 202 (475)
T TIGR00924 176 LAAVGMVIGLLTFFAGRHMLRDIGSVP 202 (475)
T ss_pred HHHHHHHHHHHHHHHcccccccCCCCC
Confidence 999999999999988888876544333
No 7
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.28 E-value=5.1e-12 Score=115.57 Aligned_cols=94 Identities=24% Similarity=0.421 Sum_probs=85.1
Q ss_pred HHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhh
Q 029822 35 MLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGI 114 (187)
Q Consensus 35 ~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i 114 (187)
..+++++.++++|+|.++||.+++.+|+|+++|+ +|++.|+++|+.+|+|+++++.+.+++++++||+.+|++
T Consensus 101 ~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~-------~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~i 173 (493)
T PRK15462 101 SFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDP-------RRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGL 173 (493)
T ss_pred hHHHHHHHHHHHhcccccccHHHHHHHHCCCCCc-------cccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHH
Confidence 3467788889999999999999999999987653 678899999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCceee
Q 029822 115 PAAIMLLSALCFFLASPFYVK 135 (187)
Q Consensus 115 ~~v~~~val~~f~~g~~~y~~ 135 (187)
++++|++++++|+.+++.+.+
T Consensus 174 aaigm~l~li~~~~~~~~l~~ 194 (493)
T PRK15462 174 AAVGMIAGLVIFLCGNRHFTH 194 (493)
T ss_pred HHHHHHHHHHHHHHhhhhhcc
Confidence 999999999999998877644
No 8
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.14 E-value=7.6e-11 Score=107.39 Aligned_cols=95 Identities=20% Similarity=0.471 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFG 113 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~ 113 (187)
...+++++.++++|.|.++|+..++.+++|++++ ++++..++++|+++|+|+++++.+.+++.+++||+++|.
T Consensus 112 ~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~-------~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~ 184 (500)
T PRK09584 112 AGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDD-------PRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFA 184 (500)
T ss_pred HHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCc-------hhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHH
Confidence 3567788899999999999999999999998654 356678999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhcCCceee
Q 029822 114 IPAAIMLLSALCFFLASPFYVK 135 (187)
Q Consensus 114 i~~v~~~val~~f~~g~~~y~~ 135 (187)
++++.++++++.++..++.+++
T Consensus 185 i~~i~~~i~~i~~~~~~~~~~~ 206 (500)
T PRK09584 185 LSVVGMLITVVNFAFCQRWVKQ 206 (500)
T ss_pred HHHHHHHHHHHHHHHhHHHhcc
Confidence 9999999998888777655544
No 9
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.71 E-value=1.5e-08 Score=91.72 Aligned_cols=119 Identities=12% Similarity=0.216 Sum_probs=91.2
Q ss_pred hhHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccC-cce
Q 029822 32 SQLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLG-WKV 110 (187)
Q Consensus 32 ~~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~g-w~~ 110 (187)
.+.+.+.+...++++|.+++-|-.+++++|.|++ .+|.+.|.||||++++|+.+|.++..++.+.-+ ||+
T Consensus 119 ~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~---------~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~ 189 (493)
T KOG1330|consen 119 NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPD---------DKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRW 189 (493)
T ss_pred HHHHHHHHHHHHhccchhhhcccchhHhhhcCcc---------hhhhHHHHHhhhhcccccceeEEeeeeeccCccceEE
Confidence 4567777788899999999999999999999996 368899999999999999999999999988766 999
Q ss_pred ehhhhHHH-HHHHHHHHHhcC-Cceee-cCCC-----CChhHHHHHHHHHHHHhcCC
Q 029822 111 GFGIPAAI-MLLSALCFFLAS-PFYVK-SKAN-----TSLLSGLIQVLVASYKNRHI 159 (187)
Q Consensus 111 gF~i~~v~-~~val~~f~~g~-~~y~~-~~p~-----gs~l~~~~~v~~~a~~~~~~ 159 (187)
+|.+.++. ..+++++|++.+ +.... .+-+ ..+.+...+=++...+++..
T Consensus 190 af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~~~~~ts~~kDl~~l~~~~v~ 246 (493)
T KOG1330|consen 190 AFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKMVKPFTSVWKDLKVLAKIKVF 246 (493)
T ss_pred EEEeehHHHHHHHHHHHhhccCcccccccccccCCcCCCCccchHHHHHHHHccCce
Confidence 99999986 444666666644 43311 1222 24577777767766664433
No 10
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=97.89 E-value=5e-05 Score=63.84 Aligned_cols=86 Identities=16% Similarity=0.120 Sum_probs=73.2
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
+.+.++++..+.++|.|...|...++.+|.+++ +++.+.++++..+.++|.++++.+..++.+..||+..|
T Consensus 91 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~ 161 (365)
T TIGR00900 91 NIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPE---------EQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAI 161 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH---------HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 567788888889999999999999999999874 45788899999999999999999999998889999999
Q ss_pred hhhHHHHHHHHHHHH
Q 029822 113 GIPAAIMLLSALCFF 127 (187)
Q Consensus 113 ~i~~v~~~val~~f~ 127 (187)
.+.++..+++.+..+
T Consensus 162 ~~~~~~~~~~~~~~~ 176 (365)
T TIGR00900 162 WVDAVGFAISALLIV 176 (365)
T ss_pred HHHHHHHHHHHHHHH
Confidence 998877666655433
No 11
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=97.71 E-value=0.00022 Score=60.92 Aligned_cols=86 Identities=19% Similarity=0.161 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFG 113 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~ 113 (187)
...++++..+.++|.+..-+...++..|.+++ +++...+.+++...++|..+++.+..++.+..||+..|.
T Consensus 93 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 163 (385)
T TIGR00710 93 IETLLVLRFVQAFGASAGSVISQALVRDIYPG---------EELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFA 163 (385)
T ss_pred HHHHHHHHHHHHcchhHHHHHHHHHHHHhcCc---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 45667777888899999999999999998874 456778899999999999999999999988899999999
Q ss_pred hhHHHHHHHHHHHHh
Q 029822 114 IPAAIMLLSALCFFL 128 (187)
Q Consensus 114 i~~v~~~val~~f~~ 128 (187)
+.++..++..+..+.
T Consensus 164 ~~~~~~~~~~~~~~~ 178 (385)
T TIGR00710 164 FLSLAGILLSALIFF 178 (385)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888766555554443
No 12
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=97.67 E-value=8.6e-05 Score=62.22 Aligned_cols=83 Identities=24% Similarity=0.316 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFG 113 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~ 113 (187)
...++++..+.++|.|...+...++..|.++++ ++...++++..+.++|..+++.+..++.++.||+..|.
T Consensus 85 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~---------~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~ 155 (352)
T PF07690_consen 85 FWLLLIARFLLGIGSGFFSPASNALIADWFPPE---------ERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFL 155 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTC---------CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHH
T ss_pred HHHHhhhccccccccccccccccccccccchhh---------hhhhccccccchhhhhhhcccchhhhhhhccccccccc
Confidence 347888888999999999999999999999963 45778899999999999999999999999999999999
Q ss_pred hhHHHHHHHHHH
Q 029822 114 IPAAIMLLSALC 125 (187)
Q Consensus 114 i~~v~~~val~~ 125 (187)
+.++..+++.++
T Consensus 156 ~~~~~~~~~~il 167 (352)
T PF07690_consen 156 ISAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHHHH
T ss_pred cccchhhhhhhh
Confidence 999988777664
No 13
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.64 E-value=0.00021 Score=63.26 Aligned_cols=84 Identities=13% Similarity=0.054 Sum_probs=65.7
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
+...++++..+.++|.|..-+.......|.|++ +++.+...++..+.++|..+++.+..++.+..||+..|
T Consensus 103 ~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f 173 (413)
T PRK15403 103 SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQ---------TKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLF 173 (413)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 355677778888888876656666677788774 34566788899999999999999988888889999999
Q ss_pred hhhHHHHHHHHHH
Q 029822 113 GIPAAIMLLSALC 125 (187)
Q Consensus 113 ~i~~v~~~val~~ 125 (187)
.+.++..+++++.
T Consensus 174 ~~~~~~~~i~~~~ 186 (413)
T PRK15403 174 AIIAVMGLIAFVG 186 (413)
T ss_pred HHHHHHHHHHHHH
Confidence 9988776666554
No 14
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=97.64 E-value=0.00024 Score=60.90 Aligned_cols=83 Identities=14% Similarity=0.137 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFG 113 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~ 113 (187)
...+++...+.+++.+...+...++..|.+++ +++...+++++...++|..+++.+..++.+..||+..|.
T Consensus 79 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~ 149 (377)
T PRK11102 79 IDQLIYMRFLHGLAAAAASVVINALMRDMFPK---------EEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFW 149 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHH
Confidence 34566667778888898889999999998864 356778899999999999999999999988899999998
Q ss_pred hhHHHHHHHHHH
Q 029822 114 IPAAIMLLSALC 125 (187)
Q Consensus 114 i~~v~~~val~~ 125 (187)
+.++..++..+.
T Consensus 150 ~~~~~~~~~~~~ 161 (377)
T PRK11102 150 VLALAAILAAAL 161 (377)
T ss_pred HHHHHHHHHHHH
Confidence 887765555443
No 15
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=97.63 E-value=0.00013 Score=63.32 Aligned_cols=96 Identities=13% Similarity=0.035 Sum_probs=73.8
Q ss_pred HHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhh
Q 029822 35 MLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGI 114 (187)
Q Consensus 35 ~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i 114 (187)
..++++..+.++|.+..-|.......+.+++ +.+.+.+.+++...++|..+++.+.+++-+..||+..|.+
T Consensus 303 ~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~---------~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 373 (399)
T PRK05122 303 WMALIGAALTGFGFSLVFPALGVEAVKRVPP---------QNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLA 373 (399)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 3455666778888888777776666665542 4678889999999999998888889999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCceeecCCC
Q 029822 115 PAAIMLLSALCFFLASPFYVKSKAN 139 (187)
Q Consensus 115 ~~v~~~val~~f~~g~~~y~~~~p~ 139 (187)
.++..+++++..+.-.++.+++.|+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (399)
T PRK05122 374 AALAALLGLALTWLLYRRAPRAVPE 398 (399)
T ss_pred HHHHHHHHHHHHHHhcccccccCCC
Confidence 9888888777766655666555554
No 16
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.63 E-value=0.00011 Score=69.74 Aligned_cols=121 Identities=11% Similarity=-0.085 Sum_probs=97.3
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
+.....+.++.++++.+|.+++.+.+.++|.|..++ ++++.++++|||..+.+.+.+.+....+.....+..+|
T Consensus 81 ~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~------~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~f 154 (654)
T TIGR00926 81 HPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEE------RQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCF 154 (654)
T ss_pred cchHHHHHHHHHHHHHhhccccccCchhhhHhhcCc------cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 466677788899999999999999999999998765 77889999999999999986555444444433455433
Q ss_pred h-------hhHHHHHHHHHHHHhcCCceeecCCCCChhHHHHHHHHHHHHhcCC
Q 029822 113 G-------IPAAIMLLSALCFFLASPFYVKSKANTSLLSGLIQVLVASYKNRHI 159 (187)
Q Consensus 113 ~-------i~~v~~~val~~f~~g~~~y~~~~p~gs~l~~~~~v~~~a~~~~~~ 159 (187)
. ..++.+++.++.++.....++.-++.+..-..+.+++...+..++-
T Consensus 155 g~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~ 208 (654)
T TIGR00926 155 GCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRK 208 (654)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHH
Confidence 3 6667788888889999988888889988888889999888777754
No 17
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.60 E-value=0.0004 Score=65.56 Aligned_cols=86 Identities=16% Similarity=0.229 Sum_probs=68.4
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheecc------
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNL------ 106 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~------ 106 (187)
...+++++..+.++|.|..-+...+++.|-++++ ++..++.+++.+..+|..+|+++.+++.+.+
T Consensus 171 ~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~---------~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~ 241 (633)
T TIGR00805 171 MWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSK---------NSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSV 241 (633)
T ss_pred eehhhHHHHHHHhccCCcchhcCchhhhccCCcc---------ccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccC
Confidence 4567888999999999999999999999988753 4577889999999999999998888776432
Q ss_pred ----------------CcceehhhhHHHHHHHHHHHH
Q 029822 107 ----------------GWKVGFGIPAAIMLLSALCFF 127 (187)
Q Consensus 107 ----------------gw~~gF~i~~v~~~val~~f~ 127 (187)
+|+.+|.+.++..++..++++
T Consensus 242 ~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~ 278 (633)
T TIGR00805 242 NTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFF 278 (633)
T ss_pred CCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 388999998876555444433
No 18
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=97.55 E-value=0.00038 Score=60.73 Aligned_cols=84 Identities=17% Similarity=0.061 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFG 113 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~ 113 (187)
...+++...+.+++.+..-+...+...|.++++ ++.+..++++...++|..+++.+..++.++.||+..|.
T Consensus 101 ~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~---------~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~ 171 (406)
T PRK15402 101 IEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEA---------DAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFV 171 (406)
T ss_pred HHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChh---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHH
Confidence 345666677778888888888888888888742 34556677777788899999999899988899999999
Q ss_pred hhHHHHHHHHHHH
Q 029822 114 IPAAIMLLSALCF 126 (187)
Q Consensus 114 i~~v~~~val~~f 126 (187)
+.++..+++.+..
T Consensus 172 ~~~~~~~~~~~~~ 184 (406)
T PRK15402 172 LFAALAALSFFGL 184 (406)
T ss_pred HHHHHHHHHHHHH
Confidence 8887766655543
No 19
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=97.51 E-value=0.00027 Score=64.07 Aligned_cols=85 Identities=14% Similarity=0.094 Sum_probs=70.1
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
+...++++..+.++|.|++.|.......+.|.+. ++|..++.++....++|..+++.+..++-++.||++.|
T Consensus 93 ~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~--------~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f 164 (495)
T PRK14995 93 TASWLIATRALLAIGAAMIVPATLAGIRATFTEE--------KQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVF 164 (495)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHH
Confidence 4567778888899999999888888787877532 46788999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHH
Q 029822 113 GIPAAIMLLSALC 125 (187)
Q Consensus 113 ~i~~v~~~val~~ 125 (187)
.+.....++.+++
T Consensus 165 ~i~~~~~~~~~~l 177 (495)
T PRK14995 165 LINVPIVLVVMGL 177 (495)
T ss_pred HHHHHHHHHHHHH
Confidence 9877655554443
No 20
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=97.50 E-value=0.00048 Score=60.49 Aligned_cols=85 Identities=16% Similarity=0.028 Sum_probs=64.8
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
+...++++..+.++|.|.. ++.....++.+++ ++|....+++..+.++|..+++.+.+++.++.|||..|
T Consensus 78 ~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~---------~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f 147 (368)
T TIGR00903 78 NYEWLLACQLLAALGQPFL-LNAFAPAASQIRE---------ERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLI 147 (368)
T ss_pred cHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHH
Confidence 4567888888899999865 4444455777663 46788899999999999999999999999999999999
Q ss_pred hhhHHH-HHHHHHHHH
Q 029822 113 GIPAAI-MLLSALCFF 127 (187)
Q Consensus 113 ~i~~v~-~~val~~f~ 127 (187)
.+.++. .+..+++++
T Consensus 148 ~~~~~l~~~~~~~~~~ 163 (368)
T TIGR00903 148 IPIAAVAAAGIILVLA 163 (368)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 885554 333343333
No 21
>TIGR00893 2A0114 d-galactonate transporter.
Probab=97.50 E-value=0.0003 Score=59.22 Aligned_cols=84 Identities=13% Similarity=0.181 Sum_probs=71.0
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
+...++++..+.++|.|..-+...+...|.+++ ++|...+.++....++|.++++.+..++.++.+|++.|
T Consensus 81 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~---------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~ 151 (399)
T TIGR00893 81 AYVSLYILRVLLGAAEAPFFPGIILIVASWFPA---------SERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAF 151 (399)
T ss_pred CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCH---------HHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHH
Confidence 456777888899999999999999999998874 46788899999999999999999999988899999999
Q ss_pred hhhHHHHHHHHHH
Q 029822 113 GIPAAIMLLSALC 125 (187)
Q Consensus 113 ~i~~v~~~val~~ 125 (187)
.+.++..++..+.
T Consensus 152 ~~~~~~~~~~~~~ 164 (399)
T TIGR00893 152 IIEGVLGIIWGVL 164 (399)
T ss_pred HHHHHHHHHHHHH
Confidence 9888765554444
No 22
>PRK03545 putative arabinose transporter; Provisional
Probab=97.47 E-value=0.00036 Score=60.69 Aligned_cols=84 Identities=13% Similarity=0.131 Sum_probs=67.9
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
+...++++..+.++|.|..-|...++..|.+++ ++|...++++..+.++|..+++.+..++.+.+||++.|
T Consensus 96 ~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~---------~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f 166 (390)
T PRK03545 96 NFTVLLISRIGIAFAHAIFWSITASLAIRVAPA---------GKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTF 166 (390)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh---------hhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHH
Confidence 345666777788888888888888999999874 34677888888899999999999999988889999999
Q ss_pred hhhHHHHHHHHHH
Q 029822 113 GIPAAIMLLSALC 125 (187)
Q Consensus 113 ~i~~v~~~val~~ 125 (187)
.+.++..++..+.
T Consensus 167 ~~~~~~~~l~~~~ 179 (390)
T PRK03545 167 LAIGGGALITLLL 179 (390)
T ss_pred HHHHHHHHHHHHH
Confidence 9988765555443
No 23
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.44 E-value=0.00042 Score=49.85 Aligned_cols=84 Identities=15% Similarity=0.167 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFG 113 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~ 113 (187)
...+++...+.+++.+..-+...+...|.++++ .+....++++...++|..+++.+..++-+..||+..|.
T Consensus 51 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 121 (141)
T TIGR00880 51 ITVLIIARFLQGFGAAFALVAGAALIADIYPPE---------ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFL 121 (141)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh---------hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHH
Confidence 345566677788888888888888888888753 45678888889999999999999999999899999998
Q ss_pred hhHHHHHHHHHHH
Q 029822 114 IPAAIMLLSALCF 126 (187)
Q Consensus 114 i~~v~~~val~~f 126 (187)
+..+..+++.+..
T Consensus 122 ~~~~~~~~~~~~~ 134 (141)
T TIGR00880 122 FLAILALAAFILL 134 (141)
T ss_pred HHHHHHHHHHHHH
Confidence 8887666655543
No 24
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=97.43 E-value=0.00042 Score=61.42 Aligned_cols=84 Identities=18% Similarity=0.213 Sum_probs=70.3
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
+...++++..+.++|.|+..+...++..|.+++ ++|...+.+++.+.++|..+++.+.+++.+++||++.|
T Consensus 89 ~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~---------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f 159 (485)
T TIGR00711 89 NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPP---------EKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIF 159 (485)
T ss_pred CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCH---------HHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehh
Confidence 355677788888999999999999999999874 45677889999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHH
Q 029822 113 GIPAAIMLLSALC 125 (187)
Q Consensus 113 ~i~~v~~~val~~ 125 (187)
.+.+...+++++.
T Consensus 160 ~~~~~~~~~~~~~ 172 (485)
T TIGR00711 160 LINVPIGIIVVVV 172 (485)
T ss_pred hhhhHHHHHHHHH
Confidence 9887655444443
No 25
>TIGR00895 2A0115 benzoate transport.
Probab=97.39 E-value=0.00058 Score=58.04 Aligned_cols=82 Identities=20% Similarity=0.195 Sum_probs=67.9
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
+...++++..+.++|.|..-+...++.+|.+++ +.+...++++..+.++|..+++.+.+++.++.||+..|
T Consensus 104 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~ 174 (398)
T TIGR00895 104 NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPK---------RFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLF 174 (398)
T ss_pred chHHHHHHHHHHhcccccchhhHHHHHHHHcCH---------HhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeeh
Confidence 345677788889999999999999999999874 35677888999999999999999999999999999999
Q ss_pred hhhHHHHHHHH
Q 029822 113 GIPAAIMLLSA 123 (187)
Q Consensus 113 ~i~~v~~~val 123 (187)
.+.++..++..
T Consensus 175 ~~~~~~~~~~~ 185 (398)
T TIGR00895 175 YVGGIAPLLLL 185 (398)
T ss_pred hhhhhHHHHHH
Confidence 99865443333
No 26
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=97.38 E-value=0.00047 Score=59.76 Aligned_cols=84 Identities=20% Similarity=0.274 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhh---hhheeccCcce
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLI---VYIQDNLGWKV 110 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~---~~i~~~~gw~~ 110 (187)
.+.++++..+.++|.|+.-+...++.+|.+++ ++|.....+++++.++|.++++.+. ..+.+..||++
T Consensus 127 ~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~---------~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~ 197 (481)
T TIGR00879 127 VEMLIVGRVLLGIGVGIASALVPMYLSEIAPK---------ALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRI 197 (481)
T ss_pred hHHHHHHHHHHHhhhhHHHhHHHHHHHccCCh---------hhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHH
Confidence 35778888999999999999999999998874 3456788899999999999999988 67777889999
Q ss_pred ehhhhHHHHHHHHHHH
Q 029822 111 GFGIPAAIMLLSALCF 126 (187)
Q Consensus 111 gF~i~~v~~~val~~f 126 (187)
.|.+.++..++.++.+
T Consensus 198 ~f~~~~~~~~~~~~~~ 213 (481)
T TIGR00879 198 PLGLQLIPAGLLFLGL 213 (481)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999776655554443
No 27
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=97.37 E-value=0.00052 Score=60.35 Aligned_cols=83 Identities=19% Similarity=0.327 Sum_probs=69.6
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
+.+.+++...+.+++.|...|...++..|.+++ +++.....+++.+.|+|..+++.+..++.+..||+..|
T Consensus 107 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~---------~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f 177 (394)
T PRK10213 107 SFSLLLIGRACLGLALGGFWAMSASLTMRLVPP---------RTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVF 177 (394)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCH---------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHH
Confidence 456777788888999999999999999999864 35677888999999999999999999999999999999
Q ss_pred hhhHHHHHHHHH
Q 029822 113 GIPAAIMLLSAL 124 (187)
Q Consensus 113 ~i~~v~~~val~ 124 (187)
.+.++..++.++
T Consensus 178 ~~~~~l~~~~~l 189 (394)
T PRK10213 178 NAAAVMGVLCIF 189 (394)
T ss_pred HHHHHHHHHHHH
Confidence 988765544443
No 28
>PRK10489 enterobactin exporter EntS; Provisional
Probab=97.33 E-value=0.00075 Score=59.19 Aligned_cols=85 Identities=18% Similarity=0.111 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFG 113 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~ 113 (187)
...+++...+.+++.|...+...+...|.+++ +++.+...++++..++|..+++.+..++-+..||++.|.
T Consensus 110 ~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~ 180 (417)
T PRK10489 110 LLAIYLLGLWDGFFGSLGVTALLAATPALVGR---------ENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYG 180 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCH---------HHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHH
Confidence 34555566666777777777777777777763 345667788888999999999999999888889999999
Q ss_pred hhHHHHHHHHHHHH
Q 029822 114 IPAAIMLLSALCFF 127 (187)
Q Consensus 114 i~~v~~~val~~f~ 127 (187)
+.++..+++.+..+
T Consensus 181 ~~~~~~~~~~~~~~ 194 (417)
T PRK10489 181 LAAAGTFITLLPLL 194 (417)
T ss_pred HHHHHHHHHHHHHH
Confidence 88877666655433
No 29
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=97.33 E-value=0.00056 Score=56.80 Aligned_cols=84 Identities=26% Similarity=0.332 Sum_probs=71.6
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
+...++++..+.++|.|...+...++..|.++++ +|...+++++.+.++|..+++.+..++.+..+|+..|
T Consensus 86 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 156 (352)
T cd06174 86 SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPK---------ERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLF 156 (352)
T ss_pred cHHHHHHHHHHHHcccccccHhHHHHHHHhCCcc---------chhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 3566777888899999999999999999998852 4577889999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHH
Q 029822 113 GIPAAIMLLSALC 125 (187)
Q Consensus 113 ~i~~v~~~val~~ 125 (187)
.+.++..+++.+.
T Consensus 157 ~~~~~~~~~~~~~ 169 (352)
T cd06174 157 LILAILGLLLALL 169 (352)
T ss_pred HHHHHHHHHHHHH
Confidence 9988776665544
No 30
>TIGR00901 2A0125 AmpG-related permease.
Probab=97.32 E-value=0.0014 Score=55.91 Aligned_cols=86 Identities=20% Similarity=0.105 Sum_probs=65.5
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccC-----
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLG----- 107 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~g----- 107 (187)
+...++....+.+++.+...+...++..|.+++ ++|.....+...+.++|.++++.+..++....|
T Consensus 82 ~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~---------~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~ 152 (356)
T TIGR00901 82 DLPLLAGLAFLIAFFSATQDIALDAWRLEILSD---------EELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGL 152 (356)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH---------hhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Confidence 344444444456677777788888999999864 356678888888999999999988888877777
Q ss_pred ---cceehhhhHHHHHHHHHHHH
Q 029822 108 ---WKVGFGIPAAIMLLSALCFF 127 (187)
Q Consensus 108 ---w~~gF~i~~v~~~val~~f~ 127 (187)
|+..|.+.++..++++++.+
T Consensus 153 ~~~wr~~f~i~ai~~l~~~~~~~ 175 (356)
T TIGR00901 153 ITLWGYIFFWTALLILPGLLVTL 175 (356)
T ss_pred ccccHHHHHHHHHHHHHHHHHHH
Confidence 99999999987777665533
No 31
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=97.25 E-value=0.0015 Score=56.73 Aligned_cols=83 Identities=19% Similarity=0.127 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFG 113 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~ 113 (187)
...++++..+.++|.|..-+...++..|.+++ ++|....++++...++|..+++.+..++.+..||+..|.
T Consensus 91 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~---------~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~ 161 (392)
T PRK10473 91 SSLFLAGRFLQGIGAGCCYVVAFAILRDTLDD---------RRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFY 161 (392)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHH
Confidence 34556666778888888888888888888874 356778888999999999999988888888899999999
Q ss_pred hhHHHHHHHHHH
Q 029822 114 IPAAIMLLSALC 125 (187)
Q Consensus 114 i~~v~~~val~~ 125 (187)
+.++..++..+.
T Consensus 162 ~~~~~~~i~~~~ 173 (392)
T PRK10473 162 TMAAMGILVLLL 173 (392)
T ss_pred HHHHHHHHHHHH
Confidence 887765554443
No 32
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=97.24 E-value=0.001 Score=57.76 Aligned_cols=83 Identities=20% Similarity=0.206 Sum_probs=68.0
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
+...++++..+.++|.|...+...+...|.+++ +++....++++.+.++|.++++.+..++.+..+|+..|
T Consensus 102 ~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~---------~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 172 (406)
T PRK11551 102 DFPSLLVARLLTGVGLGGALPNLIALTSEAVGP---------RLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIF 172 (406)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHH
Confidence 345566777888899999999999999999864 35677889999999999999999888888889999999
Q ss_pred hhhHHHHHHHHH
Q 029822 113 GIPAAIMLLSAL 124 (187)
Q Consensus 113 ~i~~v~~~val~ 124 (187)
.+.++..++..+
T Consensus 173 ~~~~~~~~~~~~ 184 (406)
T PRK11551 173 YVGGVGPLLLVP 184 (406)
T ss_pred HHHHHHHHHHHH
Confidence 988765544443
No 33
>PRK11663 regulatory protein UhpC; Provisional
Probab=97.22 E-value=0.001 Score=59.10 Aligned_cols=78 Identities=13% Similarity=0.174 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFG 113 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~ 113 (187)
...+++...+.+++.|..-+...+...+.|++ +++.....+++.+.++|+.+++.+..++.+.+||++.|.
T Consensus 111 ~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~---------~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~ 181 (434)
T PRK11663 111 LWAFALLWVLNAFFQGWGWPVCAKLLTAWYSR---------TERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMM 181 (434)
T ss_pred HHHHHHHHHHHHHHHHccchHHHHHHHHhCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHH
Confidence 34444555566788888888888999999874 356778899999999999999999999988999999999
Q ss_pred hhHHHHH
Q 029822 114 IPAAIML 120 (187)
Q Consensus 114 i~~v~~~ 120 (187)
+.++..+
T Consensus 182 ~~~i~~~ 188 (434)
T PRK11663 182 IAGIIAI 188 (434)
T ss_pred HHHHHHH
Confidence 8876543
No 34
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=97.21 E-value=0.0012 Score=58.22 Aligned_cols=83 Identities=19% Similarity=0.271 Sum_probs=67.6
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
+.+.+++...+.++|.|...|...+...|.+++ +++....++++...++|..+++.+.+++. ++||+..|
T Consensus 98 ~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~---------~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f 167 (400)
T PRK11646 98 EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRP---------HQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVC 167 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHH
Confidence 345677777788888888889988888888763 35778999999999999999999999998 78999999
Q ss_pred hhhHHHHHHHHHH
Q 029822 113 GIPAAIMLLSALC 125 (187)
Q Consensus 113 ~i~~v~~~val~~ 125 (187)
.+.++..++..+.
T Consensus 168 ~~~~~~~~~~~i~ 180 (400)
T PRK11646 168 ATGAVLFVLAAAF 180 (400)
T ss_pred HHHHHHHHHHHHH
Confidence 9988765555433
No 35
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=97.21 E-value=0.0019 Score=57.60 Aligned_cols=81 Identities=7% Similarity=0.130 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheecc-Ccceeh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNL-GWKVGF 112 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~-gw~~gF 112 (187)
...+++...+.++|.|+.-|.......+.+++ +++..+..+++.+.++|..+++.+..++.+.. ||+..|
T Consensus 131 ~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~---------~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f 201 (465)
T TIGR00894 131 IALVVFCRVIQGLAQGSVSPATHKIIVKWAPP---------KERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIF 201 (465)
T ss_pred chHHHHHHHHHHHhcccchhhHHHHHHhcCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeeh
Confidence 34567777788999999999999999988874 45778889999999999999999999998884 999999
Q ss_pred hhhHHHHHHHH
Q 029822 113 GIPAAIMLLSA 123 (187)
Q Consensus 113 ~i~~v~~~val 123 (187)
.+.++..++..
T Consensus 202 ~i~~~~~~~~~ 212 (465)
T TIGR00894 202 YVFGIVGCAWS 212 (465)
T ss_pred hhhhHHHHHHH
Confidence 99887544433
No 36
>PRK12382 putative transporter; Provisional
Probab=97.18 E-value=0.001 Score=57.66 Aligned_cols=85 Identities=13% Similarity=0.031 Sum_probs=68.3
Q ss_pred HHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhh
Q 029822 35 MLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGI 114 (187)
Q Consensus 35 ~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i 114 (187)
..++++..+.++|.|..-|.......+.+++ +++.+.+.+++...++|..+++.+.+++.+++||+..|.+
T Consensus 303 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~---------~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~ 373 (392)
T PRK12382 303 WVALAGAALTGAGCSLIFPALGVEVVKRVPS---------QVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLA 373 (392)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhcCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH
Confidence 3445566667788887777777777776653 4678899999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHh
Q 029822 115 PAAIMLLSALCFFL 128 (187)
Q Consensus 115 ~~v~~~val~~f~~ 128 (187)
.++..++++++.+.
T Consensus 374 ~~~~~~~~~~~~~~ 387 (392)
T PRK12382 374 GAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHHHHh
Confidence 99888787776543
No 37
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=97.14 E-value=0.0014 Score=64.93 Aligned_cols=83 Identities=13% Similarity=0.079 Sum_probs=68.8
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
+.+.+++...+.++|.+.+.|...+++.|.++++ ++....+++.++.++|.++++.+.+++-+..||+..|
T Consensus 107 s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~---------~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~ 177 (1140)
T PRK06814 107 SVPLLFAALFLMGIHSALFGPIKYSILPDHLNKD---------ELLGANALVEAGTFIAILLGTIIGGLATISGNFVILV 177 (1140)
T ss_pred hHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCcc---------ccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHH
Confidence 4667888889999999999999999999999853 4566889999999999999999999998899999998
Q ss_pred hhhHHHHHHHHH
Q 029822 113 GIPAAIMLLSAL 124 (187)
Q Consensus 113 ~i~~v~~~val~ 124 (187)
.+.++..+++++
T Consensus 178 ~~~~~~~~~~~~ 189 (1140)
T PRK06814 178 ALLMGIAVLGWL 189 (1140)
T ss_pred HHHHHHHHHHHH
Confidence 444444433333
No 38
>PRK10504 putative transporter; Provisional
Probab=97.14 E-value=0.0025 Score=56.73 Aligned_cols=86 Identities=14% Similarity=0.166 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFG 113 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~ 113 (187)
...++++..+.++|.|...|...+...|.+++ +++...+.++....++|..+++.+..++.++.||++.|.
T Consensus 98 ~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~ 168 (471)
T PRK10504 98 LNELLLARVLQGVGGAMMVPVGRLTVMKIVPR---------EQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFL 168 (471)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCH---------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHH
Confidence 45567778889999999999888888888763 356678888999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHh
Q 029822 114 IPAAIMLLSALCFFL 128 (187)
Q Consensus 114 i~~v~~~val~~f~~ 128 (187)
+......++.+....
T Consensus 169 ~~~~~~~l~~~~~~~ 183 (471)
T PRK10504 169 INIPVGIIGAIATLM 183 (471)
T ss_pred HHHHHHHHHHHHHHH
Confidence 987665555544433
No 39
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=97.12 E-value=0.0027 Score=55.56 Aligned_cols=85 Identities=19% Similarity=0.170 Sum_probs=63.4
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheec-cCccee
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDN-LGWKVG 111 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~-~gw~~g 111 (187)
+...+++...+.++..+...|...++..|.+++ ++|.++..+..++.++|.+++..+..++-+. .||+..
T Consensus 93 ~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~---------~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~ 163 (402)
T PRK11902 93 ALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHP---------EERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNT 163 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh---------hhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHH
Confidence 444455554556777888889999999998764 2456677777788899999998888887775 599999
Q ss_pred hhhhHHHHHHHHHHH
Q 029822 112 FGIPAAIMLLSALCF 126 (187)
Q Consensus 112 F~i~~v~~~val~~f 126 (187)
|.+.++..++..+..
T Consensus 164 f~i~a~~~l~~~l~~ 178 (402)
T PRK11902 164 YLLMAGLMLAGALTT 178 (402)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999887766655543
No 40
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=97.07 E-value=0.0012 Score=58.41 Aligned_cols=80 Identities=26% Similarity=0.451 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhhe--------ec
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQ--------DN 105 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~--------~~ 105 (187)
...+.+...+.++|.|+.-|...++.+|.++++ +|..+.++.+.+.+.|.+++..+...+. ..
T Consensus 124 ~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~---------~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 194 (432)
T PRK10406 124 PALLLLARLFQGLSVGGEYGTSATYMSEVAVEG---------RKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELRE 194 (432)
T ss_pred HHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCC---------cccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhc
Confidence 346777888999999999999999999998752 3455677888888999888876655543 25
Q ss_pred cCcceehhhhHHHHHHH
Q 029822 106 LGWKVGFGIPAAIMLLS 122 (187)
Q Consensus 106 ~gw~~gF~i~~v~~~va 122 (187)
+|||..|.+.++..++.
T Consensus 195 ~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 195 WGWRIPFALGAVLAVVA 211 (432)
T ss_pred cchHHHHHHHHHHHHHH
Confidence 89999999877755444
No 41
>PRK12307 putative sialic acid transporter; Provisional
Probab=97.06 E-value=0.0013 Score=57.41 Aligned_cols=80 Identities=15% Similarity=0.287 Sum_probs=66.4
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
+...++++..+.++|.|+.-+...++..|.+++ ++|....+++..+.++|.++++.+.+++.+.+||+..|
T Consensus 105 ~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~---------~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f 175 (426)
T PRK12307 105 GVIMLTLSRFIVGMGMAGEYACASTYAVESWPK---------HLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAF 175 (426)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCH---------hHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHH
Confidence 456777888889999999999999999998874 34566788888999999999999999998999999999
Q ss_pred hhhHHHHHH
Q 029822 113 GIPAAIMLL 121 (187)
Q Consensus 113 ~i~~v~~~v 121 (187)
.+.++..++
T Consensus 176 ~i~~~~~~~ 184 (426)
T PRK12307 176 FVGLLPVLL 184 (426)
T ss_pred HHHHHHHHH
Confidence 986654433
No 42
>PRK10054 putative transporter; Provisional
Probab=97.06 E-value=0.0017 Score=57.14 Aligned_cols=79 Identities=16% Similarity=0.143 Sum_probs=59.5
Q ss_pred HHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhH
Q 029822 37 LYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPA 116 (187)
Q Consensus 37 ~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~ 116 (187)
+++...+++.+.+.+.|...+...|.+++ +++.+.++++|...|+|..+++.+..++.+ .||+..|.+.+
T Consensus 99 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---------~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~ 168 (395)
T PRK10054 99 VVLFFALINCAYSVFSTVLKAWFADNLSS---------TSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAA 168 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCH---------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHH
Confidence 33334445555566667777777777653 457789999999999999999999999875 79999999988
Q ss_pred HHHHHHHHH
Q 029822 117 AIMLLSALC 125 (187)
Q Consensus 117 v~~~val~~ 125 (187)
+..+++++.
T Consensus 169 ~~~~i~~i~ 177 (395)
T PRK10054 169 ICSAFPLVF 177 (395)
T ss_pred HHHHHHHHH
Confidence 877666543
No 43
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=97.04 E-value=0.0029 Score=54.92 Aligned_cols=80 Identities=16% Similarity=0.159 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFG 113 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~ 113 (187)
...++++..+.++|.|...+....+..|.+++ +++.....++..+..+|.++++.+..++.+..||+..|.
T Consensus 96 ~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~ 166 (394)
T PRK11652 96 LTVLIAASAIQGLGTGVGGVMARTLPRDLYEG---------TQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYL 166 (394)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHH
Confidence 45566677777888887777777777777763 245566777778889999999998888888899999999
Q ss_pred hhHHHHHHH
Q 029822 114 IPAAIMLLS 122 (187)
Q Consensus 114 i~~v~~~va 122 (187)
+.++..++.
T Consensus 167 ~~~~~~~~~ 175 (394)
T PRK11652 167 FLLLLGAGV 175 (394)
T ss_pred HHHHHHHHH
Confidence 887654443
No 44
>PRK10091 MFS transport protein AraJ; Provisional
Probab=97.04 E-value=0.0017 Score=56.48 Aligned_cols=84 Identities=8% Similarity=0.186 Sum_probs=65.4
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
+...++++..+.++|.|...+....+..+.+++ +++......+..+.++|..+++.+..++-+..||++.|
T Consensus 90 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f 160 (382)
T PRK10091 90 SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKP---------GKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTF 160 (382)
T ss_pred cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCh---------HHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHH
Confidence 456677788888899888888777777777654 24555677777889999999988888888889999999
Q ss_pred hhhHHHHHHHHHH
Q 029822 113 GIPAAIMLLSALC 125 (187)
Q Consensus 113 ~i~~v~~~val~~ 125 (187)
.+.++..++..+.
T Consensus 161 ~~~~~~~~~~~~~ 173 (382)
T PRK10091 161 LLIAVFNIAVLAS 173 (382)
T ss_pred HHHHHHHHHHHHH
Confidence 9988765554443
No 45
>PRK11010 ampG muropeptide transporter; Validated
Probab=97.04 E-value=0.0038 Score=56.82 Aligned_cols=84 Identities=15% Similarity=0.171 Sum_probs=67.2
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhhee-ccCccee
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQD-NLGWKVG 111 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~-~~gw~~g 111 (187)
+...+++...+.+++.+...+...++..|.+++ +++.....+.-++.++|.+++..+..++.+ ..||+..
T Consensus 106 ~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~---------~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~ 176 (491)
T PRK11010 106 QLRWLAALAVVIAFCSASQDIVFDAWKTDVLPA---------EERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGM 176 (491)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh---------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHH
Confidence 456666677778888888888999999999874 245667778888899999999988888888 5799999
Q ss_pred hhhhHHHHHHHHHH
Q 029822 112 FGIPAAIMLLSALC 125 (187)
Q Consensus 112 F~i~~v~~~val~~ 125 (187)
|.+.++.+++..+.
T Consensus 177 f~i~a~l~ll~~l~ 190 (491)
T PRK11010 177 YWLMAALLIPCIIA 190 (491)
T ss_pred HHHHHHHHHHHHHH
Confidence 99988776665554
No 46
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=97.02 E-value=0.00071 Score=58.48 Aligned_cols=85 Identities=14% Similarity=0.154 Sum_probs=66.2
Q ss_pred HHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhh
Q 029822 35 MLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGI 114 (187)
Q Consensus 35 ~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i 114 (187)
..+++...+.+++.|...|...+...+..++ +.+.+.+.+++...++|..+++.+..++.++.||+..|.+
T Consensus 312 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---------~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~ 382 (408)
T PRK09874 312 LQLGILRFLLGAADGALLPAVQTLLVYNSSN---------QIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLV 382 (408)
T ss_pred HHHHHHHHHHHhhhHhhHHHHHHHHHHhCCc---------ccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHH
Confidence 4455566677888888888877776555432 2456678888889999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHh
Q 029822 115 PAAIMLLSALCFFL 128 (187)
Q Consensus 115 ~~v~~~val~~f~~ 128 (187)
.++..+++.+..+.
T Consensus 383 ~~~~~l~~~~~~~~ 396 (408)
T PRK09874 383 TAGVVLFNAVYSWN 396 (408)
T ss_pred HHHHHHHHHHHHHH
Confidence 99887777665444
No 47
>PRK11043 putative transporter; Provisional
Probab=96.94 E-value=0.0026 Score=55.28 Aligned_cols=83 Identities=19% Similarity=0.159 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFG 113 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~ 113 (187)
...++++..+.++|.+..-+...++..|.+++ +++...++......++|..+++.+..++.+.+||+..|.
T Consensus 94 ~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~ 164 (401)
T PRK11043 94 AAQLLVLRFVQAVGVCSAAVIWQALVIDRYPA---------QKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFA 164 (401)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHH
Confidence 45566677777888887777777888888874 244556777777889999999999999999999999999
Q ss_pred hhHHHHHHHHHH
Q 029822 114 IPAAIMLLSALC 125 (187)
Q Consensus 114 i~~v~~~val~~ 125 (187)
+.++..++..+.
T Consensus 165 ~~~~~~~~~~~~ 176 (401)
T PRK11043 165 TLFAITLLLILP 176 (401)
T ss_pred HHHHHHHHHHHH
Confidence 887765555443
No 48
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=96.91 E-value=0.0013 Score=55.36 Aligned_cols=83 Identities=14% Similarity=0.187 Sum_probs=66.2
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHh-hhhhhheeccCccee
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAV-TLIVYIQDNLGWKVG 111 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~-~~~~~i~~~~gw~~g 111 (187)
+...++++..+.++|.|..-+...++..|.+++ +++...+.++..+.++|..+++ .+...+.+..+|+..
T Consensus 82 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---------~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 152 (379)
T TIGR00881 82 SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSR---------SERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWV 152 (379)
T ss_pred hHHHHHHHHHHHHhhccccCCchHHHHHHhcCH---------hhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhH
Confidence 456677788888999999999999999999875 2456677888889999999998 566777788899999
Q ss_pred hhhhHHHHHHHHH
Q 029822 112 FGIPAAIMLLSAL 124 (187)
Q Consensus 112 F~i~~v~~~val~ 124 (187)
|.+.++..++..+
T Consensus 153 ~~~~~~~~~~~~~ 165 (379)
T TIGR00881 153 FIVPGIIAIIVSL 165 (379)
T ss_pred HHHHHHHHHHHHH
Confidence 9988876544433
No 49
>PRK03893 putative sialic acid transporter; Provisional
Probab=96.89 E-value=0.0024 Score=57.06 Aligned_cols=81 Identities=19% Similarity=0.242 Sum_probs=67.2
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
+...++++..+.++|.|+..+...++..|.+++ +++...+.+++.+.++|.++++.+..++-+++||+..|
T Consensus 107 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~---------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f 177 (496)
T PRK03893 107 GYWTLFIARLVIGMGMAGEYGSSATYVIESWPK---------HLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALF 177 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHH
Confidence 456677788888999999999999999999874 45677788889999999999999999999999999999
Q ss_pred hhhHHHHHHH
Q 029822 113 GIPAAIMLLS 122 (187)
Q Consensus 113 ~i~~v~~~va 122 (187)
.+.++..++.
T Consensus 178 ~~~~~~~~~~ 187 (496)
T PRK03893 178 FIGILPIIFA 187 (496)
T ss_pred HHHHHHHHHH
Confidence 8865544433
No 50
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=96.87 E-value=0.0028 Score=56.05 Aligned_cols=79 Identities=15% Similarity=0.160 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhhee------ccC
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQD------NLG 107 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~------~~g 107 (187)
...++++..+.++|.|+.-|.......+-|++ ++|.....++..+.++|..+++.+..++.+ ..|
T Consensus 96 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~---------~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~g 166 (412)
T TIGR02332 96 PESLYLLRILVGIAEAGFLPGILLYLTFWFPA---------YFRARANALFMIAMPVTMALGLILSGYILALDGLMALKG 166 (412)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccc
Confidence 46677888899999999988888888888884 356778888889999999999888877753 479
Q ss_pred cceehhhhHHHHHH
Q 029822 108 WKVGFGIPAAIMLL 121 (187)
Q Consensus 108 w~~gF~i~~v~~~v 121 (187)
|+..|.+.++..++
T Consensus 167 wr~~f~~~~~~~l~ 180 (412)
T TIGR02332 167 WQWLFLLEGFPSVI 180 (412)
T ss_pred hhHHHHHHHHHHHH
Confidence 99999997765444
No 51
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=96.86 E-value=0.0032 Score=53.84 Aligned_cols=83 Identities=18% Similarity=0.255 Sum_probs=66.2
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccC--cce
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLG--WKV 110 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~g--w~~ 110 (187)
+...++++..+.++|.|+..+...++..|.+++ +++.....++..+.++|..+++.+...+.+..+ |+.
T Consensus 99 ~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~ 169 (405)
T TIGR00891 99 GYITMFIARLVIGIGMGGEYGSSAAYVIESWPK---------HLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRA 169 (405)
T ss_pred cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCCh---------hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHH
Confidence 345677788889999999999999999998874 346778889999999999999988888877666 999
Q ss_pred ehhhhHHHHHHHHH
Q 029822 111 GFGIPAAIMLLSAL 124 (187)
Q Consensus 111 gF~i~~v~~~val~ 124 (187)
.|.+.++..++.++
T Consensus 170 ~f~~~~~~~~~~~~ 183 (405)
T TIGR00891 170 LFFISILPIIFALW 183 (405)
T ss_pred HHHHHHHHHHHHHH
Confidence 99887665544443
No 52
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=96.83 E-value=0.0047 Score=51.19 Aligned_cols=84 Identities=26% Similarity=0.219 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFG 113 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~ 113 (187)
...+++...+.+++.+...+.......+.+++ +.+...+..+.+..++|..+++.+..++.++.||+..|.
T Consensus 265 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~ 335 (352)
T cd06174 265 LALLLVALLLLGFGLGFAFPALLTLASELAPP---------EARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFL 335 (352)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHhhcCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHH
Confidence 45667778888999999999999999988874 357888899999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHH
Q 029822 114 IPAAIMLLSALCF 126 (187)
Q Consensus 114 i~~v~~~val~~f 126 (187)
+.++..+++.+.+
T Consensus 336 ~~~~~~~i~~i~~ 348 (352)
T cd06174 336 ILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHHHh
Confidence 9998877776654
No 53
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=96.82 E-value=0.0042 Score=52.82 Aligned_cols=83 Identities=17% Similarity=0.181 Sum_probs=56.3
Q ss_pred HHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhh
Q 029822 36 LLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIP 115 (187)
Q Consensus 36 ~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~ 115 (187)
.+++...+++.+.+..-|...++..+..++++ +.+..+..+.+...++|..+++.+..++.+..||+..|.+.
T Consensus 89 ~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~ 161 (375)
T TIGR00899 89 LLLVLGVLLSSFASTANPQLFALAREHADRTG-------REAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTA 161 (375)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc-------hhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHH
Confidence 34444444555555666766666666554221 22223456777788999999999999998889999999998
Q ss_pred HHHHHHHHHH
Q 029822 116 AAIMLLSALC 125 (187)
Q Consensus 116 ~v~~~val~~ 125 (187)
++..++..+.
T Consensus 162 ~~~~~~~~~~ 171 (375)
T TIGR00899 162 ALAFVLCGVL 171 (375)
T ss_pred HHHHHHHHHH
Confidence 8876555444
No 54
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.81 E-value=0.0026 Score=57.42 Aligned_cols=108 Identities=17% Similarity=0.184 Sum_probs=86.0
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
..++++++..+=++|.....-+-.++.||-|.++. .|.+....---++.+|.++++...+.+=|..|+.+.|
T Consensus 158 sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~--------er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPF 229 (464)
T KOG3764|consen 158 SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDN--------ERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPF 229 (464)
T ss_pred hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccch--------hhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcH
Confidence 45688899999999999999999999999999753 3555666666679999999999999999999999999
Q ss_pred hhhHHHHHHHHHH-HHhcCCceeec--CCCCChhHHHHH
Q 029822 113 GIPAAIMLLSALC-FFLASPFYVKS--KANTSLLSGLIQ 148 (187)
Q Consensus 113 ~i~~v~~~val~~-f~~g~~~y~~~--~p~gs~l~~~~~ 148 (187)
+|.++.+++...+ |+.-++.-... .+++.++.++.+
T Consensus 230 lVL~~v~Lld~~L~l~vi~p~~~~~~~~~~~~~~~~Ll~ 268 (464)
T KOG3764|consen 230 LVLAIVLLLDGALQLLVIEPTEMDPDSTEQGTPMWSLLM 268 (464)
T ss_pred HHHHHHHHHHHHHHHheeCccccCccccccCccHHHHHh
Confidence 9999988776655 44444433332 578888888764
No 55
>PRK12382 putative transporter; Provisional
Probab=96.74 E-value=0.005 Score=53.38 Aligned_cols=77 Identities=12% Similarity=0.227 Sum_probs=60.9
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
....++++..+.++|.+..-+...+.+.|.+++ ++|....+++..+.+.|..+++.+..++.+.+||+..+
T Consensus 111 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~---------~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~ 181 (392)
T PRK12382 111 KFALLVVGRLILGFGESQLLTGALTWGLGLVGP---------KHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALA 181 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCc---------cccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHH
Confidence 456677788888999998888888888888764 24566788888899999999999999988889998776
Q ss_pred hhhHHH
Q 029822 113 GIPAAI 118 (187)
Q Consensus 113 ~i~~v~ 118 (187)
.+..+.
T Consensus 182 ~~~~~~ 187 (392)
T PRK12382 182 LTTMVL 187 (392)
T ss_pred HHHHHH
Confidence 665443
No 56
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=96.71 E-value=0.0064 Score=51.43 Aligned_cols=82 Identities=22% Similarity=0.325 Sum_probs=63.0
Q ss_pred HHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhhe--------ecc
Q 029822 35 MLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQ--------DNL 106 (187)
Q Consensus 35 ~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~--------~~~ 106 (187)
.+++++..+.++|.|+.-+...++..|.++++ +|.....++..+.++|.++++.+...+. +.+
T Consensus 97 ~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~---------~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~ 167 (394)
T TIGR00883 97 ILLLLARLIQGFSLGGEWGGAALYLAEYAPPG---------KRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEW 167 (394)
T ss_pred HHHHHHHHHHHhhccccccccHHHhhhcCCcc---------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhcc
Confidence 35677778889999999999999999888642 4566778888888899988877655543 357
Q ss_pred CcceehhhhHHHHHHHHHH
Q 029822 107 GWKVGFGIPAAIMLLSALC 125 (187)
Q Consensus 107 gw~~gF~i~~v~~~val~~ 125 (187)
+|+..|.+.++..+++++.
T Consensus 168 ~w~~~~~~~~~~~~~~~~~ 186 (394)
T TIGR00883 168 GWRIPFLVSAVLVLIGLYL 186 (394)
T ss_pred chHHHHHHHHHHHHHHHHH
Confidence 9999999888766665544
No 57
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=96.68 E-value=0.0029 Score=53.27 Aligned_cols=79 Identities=13% Similarity=0.193 Sum_probs=62.5
Q ss_pred HHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhH
Q 029822 37 LYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPA 116 (187)
Q Consensus 37 ~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~ 116 (187)
++....+.+++.|+.-+...++..|.+++ +++.+.+.+++...++|..+++.+.+++.++.||+..|.+.+
T Consensus 298 ~~~~~~~~g~~~g~~~~~~~~~~~~~~~~---------~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~ 368 (377)
T TIGR00890 298 FLATVALVFFTWGGTISLFPSLVSDIFGP---------ANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTG 368 (377)
T ss_pred HHHHHHHHHHHhccchhccHHHHHHHhhh---------hhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHH
Confidence 33445566677777777777788888764 346778889999999999999999999999999999999988
Q ss_pred HHHHHHHH
Q 029822 117 AIMLLSAL 124 (187)
Q Consensus 117 v~~~val~ 124 (187)
+..+++++
T Consensus 369 ~~~~~~~~ 376 (377)
T TIGR00890 369 AFALTSLA 376 (377)
T ss_pred HHHHHhcc
Confidence 87766653
No 58
>PRK03699 putative transporter; Provisional
Probab=96.67 E-value=0.0076 Score=52.59 Aligned_cols=84 Identities=13% Similarity=0.124 Sum_probs=62.7
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhh-eeccCccee
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYI-QDNLGWKVG 111 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i-~~~~gw~~g 111 (187)
+...++++..+.+++.|...++..+...+.+++ +++.......+...++|+.+++....++ .+..||+..
T Consensus 94 ~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~---------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~ 164 (394)
T PRK03699 94 SLALFSIAMFVLGVVSGITMSIGTFLITHVYEG---------KQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWV 164 (394)
T ss_pred hHHHHHHHHHHHHHhhHhhccchhHHhhhhccc---------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHH
Confidence 345677777888899998888888999998854 2345566666777888888888877776 456899999
Q ss_pred hhhhHHHHHHHHHH
Q 029822 112 FGIPAAIMLLSALC 125 (187)
Q Consensus 112 F~i~~v~~~val~~ 125 (187)
|.+.++..++..+.
T Consensus 165 f~~~~~~~~~~~~~ 178 (394)
T PRK03699 165 YACIGLVYVAIFIL 178 (394)
T ss_pred HHHHHHHHHHHHHH
Confidence 99877765554443
No 59
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=96.65 E-value=0.005 Score=54.65 Aligned_cols=81 Identities=11% Similarity=0.085 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhh-heeccCcceeh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVY-IQDNLGWKVGF 112 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~-i~~~~gw~~gF 112 (187)
...+++...+.+++.|...+.......|.+++ +++...+++++.+.++|+.+++.+..+ +.++.||+..|
T Consensus 118 ~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~---------~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f 188 (438)
T TIGR00712 118 IAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQ---------SERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAAL 188 (438)
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHhcCc---------ccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHH
Confidence 34556666778888888888888888888874 246778889999999999888776665 45567999999
Q ss_pred hhhHHHHHHHH
Q 029822 113 GIPAAIMLLSA 123 (187)
Q Consensus 113 ~i~~v~~~val 123 (187)
.+.++..++..
T Consensus 189 ~~~~~~~~i~~ 199 (438)
T TIGR00712 189 YFPAICAIIVA 199 (438)
T ss_pred HHHHHHHHHHH
Confidence 99887655543
No 60
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=96.62 E-value=0.0039 Score=56.39 Aligned_cols=79 Identities=22% Similarity=0.269 Sum_probs=57.3
Q ss_pred HHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhhe--------eccC
Q 029822 36 LLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQ--------DNLG 107 (187)
Q Consensus 36 ~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~--------~~~g 107 (187)
++.+...+.++|.|+.-++..++.+|.++++ +|.....++..+.++|..++..+...+. .++|
T Consensus 120 ~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~---------~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~g 190 (490)
T PRK10642 120 LLLLCKMAQGFSVGGEYTGASIFVAEYSPDR---------KRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWG 190 (490)
T ss_pred HHHHHHHHHHhHhHhhHHHHHHHHHHhCCCC---------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCcc
Confidence 4777788899999999999999999998753 2344566677777777777765543332 3689
Q ss_pred cceehhhhHHHHHHHH
Q 029822 108 WKVGFGIPAAIMLLSA 123 (187)
Q Consensus 108 w~~gF~i~~v~~~val 123 (187)
||+.|.+.++..++++
T Consensus 191 WR~~f~i~~~~~l~~~ 206 (490)
T PRK10642 191 WRIPFFIALPLGIIGL 206 (490)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999765444333
No 61
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=96.62 E-value=0.0061 Score=52.66 Aligned_cols=82 Identities=17% Similarity=0.180 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFG 113 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~ 113 (187)
...++++..+.+++.+ +-+...+...|++++ +++.....++..+.++|.++++.+..++.+..||+..|.
T Consensus 107 ~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~ 176 (408)
T PRK09874 107 IWQFLILRALLGLLGG-FVPNANALIATQVPR---------NKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFF 176 (408)
T ss_pred HHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCH---------hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 4556666666777654 446666777777653 345667788888999999999999999988899999999
Q ss_pred hhHHHHHHHHHH
Q 029822 114 IPAAIMLLSALC 125 (187)
Q Consensus 114 i~~v~~~val~~ 125 (187)
+.++..++..+.
T Consensus 177 ~~~~~~~~~~~~ 188 (408)
T PRK09874 177 ITASVLFLCFLV 188 (408)
T ss_pred HHHHHHHHHHHH
Confidence 988776655543
No 62
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=96.60 E-value=0.0045 Score=55.54 Aligned_cols=76 Identities=16% Similarity=0.130 Sum_probs=58.4
Q ss_pred HHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHH
Q 029822 42 GLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLL 121 (187)
Q Consensus 42 ~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~v 121 (187)
.+.++|.|..-+.......+-|. ++|.....+++.+.++|..+++.+.+++.+.+||++.|.+.++..++
T Consensus 116 ~l~G~~~~~~~~~~~~~~~~~~~----------~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~ 185 (455)
T TIGR00892 116 FITGLGLAFNFQPSLTMLGKYFY----------RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLH 185 (455)
T ss_pred HHHHhcchhhhhHHHHHHHHHHH----------hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 45677777654444566677663 34677888999999999999999999999999999999999987666
Q ss_pred HHHHHH
Q 029822 122 SALCFF 127 (187)
Q Consensus 122 al~~f~ 127 (187)
+.+..+
T Consensus 186 ~~v~~~ 191 (455)
T TIGR00892 186 CCVCGA 191 (455)
T ss_pred HHHHHH
Confidence 554433
No 63
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=96.58 E-value=0.0051 Score=55.75 Aligned_cols=80 Identities=20% Similarity=0.160 Sum_probs=65.8
Q ss_pred HHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHH
Q 029822 39 LAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAI 118 (187)
Q Consensus 39 ~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~ 118 (187)
+.+.+++++.+......-++..|+.+ +++ +......++.|.+.++|.+++..+.+++.+.+||+..|.+.++.
T Consensus 125 ~~~~l~~~~~a~~dv~~da~~~e~~~-~~~------~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l 197 (468)
T TIGR00788 125 AFIFLAALAKALYDVLVDSLYSERIR-ESP------SAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAAL 197 (468)
T ss_pred HHHHHHHHHHHHHHHhHHHHHhhhhh-cCC------CcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHH
Confidence 36778899999999999999999988 333 23455668899999999999999999999999999999998887
Q ss_pred HHHHHHH
Q 029822 119 MLLSALC 125 (187)
Q Consensus 119 ~~val~~ 125 (187)
.++.++.
T Consensus 198 ~ll~~~~ 204 (468)
T TIGR00788 198 LLLQLFV 204 (468)
T ss_pred HHHHHHH
Confidence 7666443
No 64
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=96.58 E-value=0.0067 Score=51.01 Aligned_cols=82 Identities=22% Similarity=0.193 Sum_probs=60.5
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
+...++++..+.++|.|...+...+...+.+++ +|.....++..+.++|.+++......+-+..||+..|
T Consensus 90 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f 159 (377)
T TIGR00890 90 SLAALYLTYGLASAGVGIAYGIALNTAVKWFPD----------KRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAF 159 (377)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCc----------ccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHH
Confidence 345666777788888888777777777766642 3456778888899999887766667777778999999
Q ss_pred hhhHHHHHHHHH
Q 029822 113 GIPAAIMLLSAL 124 (187)
Q Consensus 113 ~i~~v~~~val~ 124 (187)
.+.++..++..+
T Consensus 160 ~~~~~~~~~~~~ 171 (377)
T TIGR00890 160 IYMGIIFLLVIV 171 (377)
T ss_pred HHHHHHHHHHHH
Confidence 998876555443
No 65
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=96.58 E-value=0.0048 Score=54.03 Aligned_cols=82 Identities=10% Similarity=0.099 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheecc-Ccceeh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNL-GWKVGF 112 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~-gw~~gF 112 (187)
...++++..+.++|.|..-+.......+.|++ ++......+..+.+.|..++..+.+++.++. +|+..|
T Consensus 97 ~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~----------~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~ 166 (393)
T PRK09705 97 SALLLSSALLGGVGIGIIQAVMPSVIKRRFQQ----------RTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTL 166 (393)
T ss_pred hHHHHHHHHHHHhHHHHHhhhhhHHHHHHccc----------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 45677788899999999999988888888752 3456777888889999999999999988775 899887
Q ss_pred hhhHHHHHHHHHH
Q 029822 113 GIPAAIMLLSALC 125 (187)
Q Consensus 113 ~i~~v~~~val~~ 125 (187)
.+-++..+++++.
T Consensus 167 ~~~~~~~~~~~~~ 179 (393)
T PRK09705 167 AWWALPAVVALFA 179 (393)
T ss_pred HHHHHHHHHHHHH
Confidence 6655444444433
No 66
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=96.57 E-value=0.0048 Score=54.85 Aligned_cols=83 Identities=13% Similarity=0.130 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHH-HHhhHhHHHHhhhhhhheec------c
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYY-VSVSASSMVAVTLIVYIQDN------L 106 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y-~~invG~li~~~~~~~i~~~------~ 106 (187)
...+++...+.+++.|...++...+.+|.+++ +.+.+.+.+++ +..++|+.+++.+.+++.++ +
T Consensus 308 ~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~---------~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~ 378 (418)
T TIGR00889 308 YALLFLSMIVYGCAFDFFNISGSVFVEKEVPV---------HIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTF 378 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH---------HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCC
Confidence 34566677778888888888888888998874 46788899997 56789999999999999887 4
Q ss_pred CcceehhhhHHHHHHHHHH
Q 029822 107 GWKVGFGIPAAIMLLSALC 125 (187)
Q Consensus 107 gw~~gF~i~~v~~~val~~ 125 (187)
||+..|.+.++..+++.+.
T Consensus 379 ~~~~~f~~~~~~~~i~~~l 397 (418)
T TIGR00889 379 DWQTMWLFFAGYIAILAVL 397 (418)
T ss_pred chHHHHHHHHHHHHHHHHH
Confidence 6999998887765554443
No 67
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=96.56 E-value=0.0077 Score=55.30 Aligned_cols=91 Identities=10% Similarity=0.107 Sum_probs=67.5
Q ss_pred HHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhh--eec-------
Q 029822 35 MLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYI--QDN------- 105 (187)
Q Consensus 35 ~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i--~~~------- 105 (187)
..+.+++.+.-++.....+...++++|..++++ ++....+.|+.+..++|++++..+..+. .+.
T Consensus 115 ~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~-------~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~ 187 (477)
T TIGR01301 115 IVFVVGFWILDVANNMLQGPCRAFLADLTGGDA-------RRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTE 187 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccCchh-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccc
Confidence 455666667777888888888999999998643 3456788999999999999998876654 111
Q ss_pred ------cCcceehhhhHHHHHHHHHHHHhcCCc
Q 029822 106 ------LGWKVGFGIPAAIMLLSALCFFLASPF 132 (187)
Q Consensus 106 ------~gw~~gF~i~~v~~~val~~f~~g~~~ 132 (187)
.+.+..|.+.++.++++.++-+...+.
T Consensus 188 ~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E 220 (477)
T TIGR01301 188 ACGVSCANLKSCFLIDIILLAILTYIALSAVKE 220 (477)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHeeeeec
Confidence 166788999998888877765554333
No 68
>TIGR00893 2A0114 d-galactonate transporter.
Probab=96.56 E-value=0.0094 Score=50.06 Aligned_cols=77 Identities=16% Similarity=0.110 Sum_probs=60.8
Q ss_pred HHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccC-cceehhhhHHHHH
Q 029822 42 GLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLG-WKVGFGIPAAIML 120 (187)
Q Consensus 42 ~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~g-w~~gF~i~~v~~~ 120 (187)
.+++.+..+..+...++.+|.+++ +.+...+.++....++|..+++.+.+++.+..| |...|.+.++..+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~ 389 (399)
T TIGR00893 319 VALGFFGLGAGAIGWALISDNAPG---------NIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALAL 389 (399)
T ss_pred HHHHHhchhhhhHHHHHHHhhcCh---------hHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHH
Confidence 333444444678888888888764 356788899999999999999999999999998 9999998888777
Q ss_pred HHHHHHH
Q 029822 121 LSALCFF 127 (187)
Q Consensus 121 val~~f~ 127 (187)
++.+.++
T Consensus 390 ~~~~~~~ 396 (399)
T TIGR00893 390 IGALSYL 396 (399)
T ss_pred HHHHHHH
Confidence 7666543
No 69
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=96.55 E-value=0.0053 Score=55.12 Aligned_cols=91 Identities=22% Similarity=0.361 Sum_probs=77.1
Q ss_pred hhHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCccee
Q 029822 32 SQLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVG 111 (187)
Q Consensus 32 ~~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~g 111 (187)
.+..++.++..+.++..|.+.+-..+..++.-.++ ++.+.-..-+.+..++..+|.-+..++.|.+|||..
T Consensus 99 p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~---------~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~ 169 (394)
T COG2814 99 PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPG---------KRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRAT 169 (394)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc---------chhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHH
Confidence 35678888999999999999999999999998753 567788888889999999998888999999999999
Q ss_pred hhhhHHHHHHHHHHHHhcCC
Q 029822 112 FGIPAAIMLLSALCFFLASP 131 (187)
Q Consensus 112 F~i~~v~~~val~~f~~g~~ 131 (187)
|.+-++.-+++++..+..-|
T Consensus 170 F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 170 FLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHhCC
Confidence 99999877777776666655
No 70
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=96.54 E-value=0.0075 Score=53.51 Aligned_cols=84 Identities=17% Similarity=0.109 Sum_probs=62.9
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhh--------ee
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYI--------QD 104 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i--------~~ 104 (187)
....++++..+.++|.|+.-|...++++|.++++ +|......+-.+..+|.+++..+...+ .+
T Consensus 119 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~---------~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~ 189 (479)
T PRK10077 119 YVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAH---------IRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLN 189 (479)
T ss_pred HHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChh---------hhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccc
Confidence 3566778889999999999999999999999853 355566777777888888776543322 24
Q ss_pred ccCcceehhhhHHHHHHHHHH
Q 029822 105 NLGWKVGFGIPAAIMLLSALC 125 (187)
Q Consensus 105 ~~gw~~gF~i~~v~~~val~~ 125 (187)
.+||++.|.+.++..++.++.
T Consensus 190 ~~gWr~~f~~~~~~~~~~~~~ 210 (479)
T PRK10077 190 TDGWRYMFASEAIPALLFLML 210 (479)
T ss_pred cCChHHHHHHHHHHHHHHHHH
Confidence 579999999887765554443
No 71
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=96.53 E-value=0.011 Score=51.31 Aligned_cols=79 Identities=19% Similarity=0.167 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFG 113 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~ 113 (187)
...+++...+.++|.|..-++..+...|.++++ +|.....++..+.++|..+++.+..++-+..||+..|.
T Consensus 112 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~---------~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~ 182 (399)
T PRK05122 112 LLLLLLGRLLLGIGESLAGTGSILWGIGRVGAL---------HTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGL 182 (399)
T ss_pred HHHHHHHHHHHHhhHHhhcchHHHHHHhhcChh---------hhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHH
Confidence 445666777888999999999988888888643 34567788888889999999888888888899998888
Q ss_pred hhHHHHHH
Q 029822 114 IPAAIMLL 121 (187)
Q Consensus 114 i~~v~~~v 121 (187)
+.++..++
T Consensus 183 ~~~~~~~~ 190 (399)
T PRK05122 183 LIMLLALL 190 (399)
T ss_pred HHHHHHHH
Confidence 76665433
No 72
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=96.42 E-value=0.007 Score=51.49 Aligned_cols=80 Identities=6% Similarity=0.112 Sum_probs=59.4
Q ss_pred HHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHH
Q 029822 38 YLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAA 117 (187)
Q Consensus 38 ~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v 117 (187)
++...+.+++.|..-+.......|.+++ ++.+....+++..++|..+++.+.+++.+..||+..|.+.++
T Consensus 292 ~~~~~~~g~~~g~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~ 361 (375)
T TIGR00899 292 LMLQLLNAIFIGILAGIGMLYFQDLMPG----------RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIV 361 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcc----------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHH
Confidence 3333444566666666666666665532 234788999999999999999999999999999999999998
Q ss_pred HHHHHHHHHH
Q 029822 118 IMLLSALCFF 127 (187)
Q Consensus 118 ~~~val~~f~ 127 (187)
..+++.+..+
T Consensus 362 ~~~~~~~~~~ 371 (375)
T TIGR00899 362 MLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHh
Confidence 8777776643
No 73
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=96.41 E-value=0.01 Score=53.21 Aligned_cols=85 Identities=12% Similarity=0.106 Sum_probs=67.9
Q ss_pred HHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheecc-Ccceehh
Q 029822 35 MLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNL-GWKVGFG 113 (187)
Q Consensus 35 ~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~-gw~~gF~ 113 (187)
..+++...+.+++.|..-++..++..|.+++ +++...+.++....++|..+++.+..++.+.. +|+..|.
T Consensus 334 ~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~---------~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~ 404 (455)
T TIGR00892 334 TGLVIYCIFFGLSFGSVGALLFEVLMDLVGA---------QRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFY 404 (455)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHhhH---------HHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHH
Confidence 4455566677788888889988988888764 34567788999999999999999999999887 5999999
Q ss_pred hhHHHHHHHHHHHHh
Q 029822 114 IPAAIMLLSALCFFL 128 (187)
Q Consensus 114 i~~v~~~val~~f~~ 128 (187)
++++.++++.+..+.
T Consensus 405 ~~~~~~li~~~~~~~ 419 (455)
T TIGR00892 405 ASGSIVVSAGLFLAI 419 (455)
T ss_pred HhhHHHHHHHHHHHH
Confidence 999877776654433
No 74
>PRK15011 sugar efflux transporter B; Provisional
Probab=96.34 E-value=0.011 Score=51.63 Aligned_cols=69 Identities=13% Similarity=0.170 Sum_probs=47.5
Q ss_pred ccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHHH
Q 029822 50 GIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALC 125 (187)
Q Consensus 50 g~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~ 125 (187)
...|....+..|..++++ +....+..+...+.++|..+++.+..++.+++||+..|.+.++..++..+.
T Consensus 121 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~ 189 (393)
T PRK15011 121 TANPQMFALAREHADKTG-------REAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVM 189 (393)
T ss_pred hhHHHHHHHHHHHhhhcc-------chHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 444555566666544221 122233467888999999999999999999999999999888754444433
No 75
>PRK03633 putative MFS family transporter protein; Provisional
Probab=96.29 E-value=0.014 Score=50.65 Aligned_cols=76 Identities=14% Similarity=0.194 Sum_probs=56.6
Q ss_pred HHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHH
Q 029822 39 LAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAI 118 (187)
Q Consensus 39 ~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~ 118 (187)
.++.+.+++.++.-|...+...|+.++ +++......+..+.++|..+++.+..++-|+.||...|.+.+..
T Consensus 290 ~~~~l~g~~~~~~~p~~~~~~~~~~~~---------~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~ 360 (381)
T PRK03633 290 PALFILGAAGFTLYPVAMAWACEKVEH---------HELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASV 360 (381)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHccCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHH
Confidence 344555666666778887777776653 23345666667789999999999999999999999999988776
Q ss_pred HHHHH
Q 029822 119 MLLSA 123 (187)
Q Consensus 119 ~~val 123 (187)
.+++.
T Consensus 361 ~l~~~ 365 (381)
T PRK03633 361 SFIYL 365 (381)
T ss_pred HHHHH
Confidence 65544
No 76
>TIGR00898 2A0119 cation transport protein.
Probab=96.29 E-value=0.024 Score=50.89 Aligned_cols=81 Identities=19% Similarity=0.130 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFG 113 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~ 113 (187)
...+++...+.++|.|+.-+....+..|.++++ +|.....++.++..+|.++++.+...+.+ |+..|.
T Consensus 180 ~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~---------~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~ 247 (505)
T TIGR00898 180 YTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKK---------QRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQL 247 (505)
T ss_pred HHHHHHHHHHHHhhccchHHHHHHHhheecChh---------hhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHH
Confidence 456777778889999999999999999998752 34556667777888898888777655544 999999
Q ss_pred hhHHHHHHHHHHH
Q 029822 114 IPAAIMLLSALCF 126 (187)
Q Consensus 114 i~~v~~~val~~f 126 (187)
+.++..++..+..
T Consensus 248 ~~~i~~~~~~~~~ 260 (505)
T TIGR00898 248 AVSLPTFLFFLLS 260 (505)
T ss_pred HHHHHHHHHHHHH
Confidence 8887655554443
No 77
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=96.28 E-value=0.011 Score=50.62 Aligned_cols=82 Identities=16% Similarity=0.188 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheecc--Cccee
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNL--GWKVG 111 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~--gw~~g 111 (187)
...++++..+.++|.|...+.......|.+++ ++....+++..+.++|..+++.+..++.+.. +|+..
T Consensus 87 ~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~ 156 (355)
T TIGR00896 87 TALLFAGTALIGVGIAIINVLLPSLIKRDFPQ----------RVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQA 156 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHHhCcc----------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH
Confidence 45566777788888888888877777776642 3466788888899999999988888887654 39999
Q ss_pred hhhhHHHHHHHHHH
Q 029822 112 FGIPAAIMLLSALC 125 (187)
Q Consensus 112 F~i~~v~~~val~~ 125 (187)
|.+.++..++.++.
T Consensus 157 f~~~~~~~~~~~~~ 170 (355)
T TIGR00896 157 LAWWALPALLALLA 170 (355)
T ss_pred HHHHHHHHHHHHHH
Confidence 88776655444433
No 78
>PRK10489 enterobactin exporter EntS; Provisional
Probab=96.25 E-value=0.01 Score=51.94 Aligned_cols=81 Identities=7% Similarity=-0.019 Sum_probs=58.8
Q ss_pred HHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhH
Q 029822 37 LYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPA 116 (187)
Q Consensus 37 ~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~ 116 (187)
..+.+.+.++|.+...+...++..+.+++ +.+.+.+.+++...++|..+++.+.+++-+.+|+...|.+.+
T Consensus 315 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~---------~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~ 385 (417)
T PRK10489 315 AVLCLALFGYLSAISSLLQYTLLQTQTPD---------EMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASG 385 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCH---------HHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHH
Confidence 34445555666665555555666666653 467888999999999999999999999999999998888777
Q ss_pred HHHHHHHHHH
Q 029822 117 AIMLLSALCF 126 (187)
Q Consensus 117 v~~~val~~f 126 (187)
++..+..++.
T Consensus 386 ~~~~~~~~~~ 395 (417)
T PRK10489 386 FGLLIIGVLL 395 (417)
T ss_pred HHHHHHHHHH
Confidence 6544443333
No 79
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=96.18 E-value=0.014 Score=52.83 Aligned_cols=82 Identities=15% Similarity=0.150 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhhee---------
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQD--------- 104 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~--------- 104 (187)
...++++..+.++|.|+.-+....+.++.+++ +.|....++++++.++|.+++..+..++..
T Consensus 115 ~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~---------~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~ 185 (502)
T TIGR00887 115 MATLCFWRFWLGVGIGGDYPLSAIITSEFATK---------KWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAA 185 (502)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCh---------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 56788899999999999999999999999885 356777888888899988888766543311
Q ss_pred --------------ccCcceehhhhHHHHHHHHH
Q 029822 105 --------------NLGWKVGFGIPAAIMLLSAL 124 (187)
Q Consensus 105 --------------~~gw~~gF~i~~v~~~val~ 124 (187)
+.+||+.|.+.++..++.++
T Consensus 186 ~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~ 219 (502)
T TIGR00887 186 ADEASCTGSCVPAVDYMWRILIGFGAVPALLALY 219 (502)
T ss_pred cccccccccccchhcccHHHHHHHHHHHHHHHHH
Confidence 24899999887776555444
No 80
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=96.16 E-value=0.013 Score=50.29 Aligned_cols=83 Identities=10% Similarity=-0.069 Sum_probs=64.3
Q ss_pred hhHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhhee-------
Q 029822 32 SQLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQD------- 104 (187)
Q Consensus 32 ~~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~------- 104 (187)
.+...+.+++.+++.|.+...+...+++++.-+++ +..+..|+.=.+..+|+++++++...+-.
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~---------~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~ 78 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIE---------TAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLS 78 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcc---------hHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchh
Confidence 46889999999999999999999999999997653 34556677777788899999888876542
Q ss_pred ---------ccCcceehhhhHHH-HHHHH
Q 029822 105 ---------NLGWKVGFGIPAAI-MLLSA 123 (187)
Q Consensus 105 ---------~~gw~~gF~i~~v~-~~val 123 (187)
..+|+..|++-++. .++++
T Consensus 79 ~~~~~~~~~~~~~~~~yl~ia~~~~~~~i 107 (310)
T TIGR01272 79 MQVATANAEAAKVHTPYLLLAGALAVLAI 107 (310)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 14789999955544 44443
No 81
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=96.10 E-value=0.026 Score=47.91 Aligned_cols=75 Identities=19% Similarity=0.201 Sum_probs=50.4
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhhee--------
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQD-------- 104 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~-------- 104 (187)
+...++++..+.++|.+.+ +...++.+|.+++ ++|....+++..+.++|..++..+.+.+..
T Consensus 90 ~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~---------~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~ 159 (366)
T TIGR00886 90 SYSVLLLLRLFIGIAGGSF-ASCMPWISFFFPK---------KIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGL 159 (366)
T ss_pred hHHHHHHHHHHHHHhchhh-HhHHHHHHHhcCH---------hhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccc
Confidence 4556677777788886655 4456788888864 245667777777777777777666555432
Q ss_pred --ccCcceeh-hhhHH
Q 029822 105 --NLGWKVGF-GIPAA 117 (187)
Q Consensus 105 --~~gw~~gF-~i~~v 117 (187)
..+|++.| .+.++
T Consensus 160 ~~~~~w~~~~~~~~~~ 175 (366)
T TIGR00886 160 PAHLAWGWAFVIVPAG 175 (366)
T ss_pred cccccccchhHHHHHH
Confidence 35899999 44343
No 82
>PRK09952 shikimate transporter; Provisional
Probab=96.06 E-value=0.014 Score=52.04 Aligned_cols=78 Identities=19% Similarity=0.291 Sum_probs=58.2
Q ss_pred HHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhhe--------eccC
Q 029822 36 LLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQ--------DNLG 107 (187)
Q Consensus 36 ~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~--------~~~g 107 (187)
.+++...+.++|.|+.-|....+..+.++++ +|....+....+..+|.+++..+..++. +.+|
T Consensus 127 ~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~---------~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~g 197 (438)
T PRK09952 127 LLVTLRAIQGFAVGGEWGGAALLAVESAPKN---------KKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWG 197 (438)
T ss_pred HHHHHHHHHHhhhcccHHHHHHHHHHhCCCC---------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccC
Confidence 4667778899999999999999999887753 2344566677788888888866555543 3589
Q ss_pred cceehhhhHHHHHHH
Q 029822 108 WKVGFGIPAAIMLLS 122 (187)
Q Consensus 108 w~~gF~i~~v~~~va 122 (187)
||..|.+.++..+++
T Consensus 198 Wr~~f~~~~~~~l~~ 212 (438)
T PRK09952 198 WRIPFLFSIVLVLIA 212 (438)
T ss_pred hHHHHHHHHHHHHHH
Confidence 999999887754443
No 83
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=96.05 E-value=0.0049 Score=55.83 Aligned_cols=79 Identities=13% Similarity=0.193 Sum_probs=62.5
Q ss_pred hhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhh--hhheeccCcceehhhhHH-HHHH
Q 029822 45 SLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLI--VYIQDNLGWKVGFGIPAA-IMLL 121 (187)
Q Consensus 45 avG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~--~~i~~~~gw~~gF~i~~v-~~~v 121 (187)
++=.|.-.|...-..+.=|.+. +|.+..+.+..+.|+|+.+.+.++ .++..+.+|+.+|.+|++ ++++
T Consensus 128 g~fQg~Gwpp~~~~i~~Wfsr~---------eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiiv 198 (448)
T COG2271 128 GWFQGMGWPPCARTITHWFSRK---------ERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIV 198 (448)
T ss_pred HHHhcCCCcHHHHHHHHHcCcc---------ccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHH
Confidence 3334444577777778888753 456778888899999999999998 999999999999999997 5777
Q ss_pred HHHHHHhcCCc
Q 029822 122 SALCFFLASPF 132 (187)
Q Consensus 122 al~~f~~g~~~ 132 (187)
+++.+..++.+
T Consensus 199 al~~~~~~rd~ 209 (448)
T COG2271 199 ALILLFLLRDR 209 (448)
T ss_pred HHHHHHHhCCC
Confidence 88888777654
No 84
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=95.98 E-value=0.012 Score=51.18 Aligned_cols=81 Identities=17% Similarity=0.072 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFG 113 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~ 113 (187)
.+.+++...+.+++.+...|...+...+. .+ ++...+.+..+..++|..+++.+..++-+++||+..|.
T Consensus 94 ~~~l~i~~~l~g~~~~~~~~~~~a~~~~~-~~----------~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~ 162 (382)
T PRK11128 94 FWLLFVAIGLFNLFFSPLVPLTDALANTW-QK----------QIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILW 162 (382)
T ss_pred HHHHHHHHHHHHHHHcccccHHHHHHHHH-Hh----------hccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHH
Confidence 45566666677888888888877776664 21 12334555666778999999999999999999999998
Q ss_pred hhHHHHHHHHHH
Q 029822 114 IPAAIMLLSALC 125 (187)
Q Consensus 114 i~~v~~~val~~ 125 (187)
+.++..++..+.
T Consensus 163 ~~~~~~~~~~~~ 174 (382)
T PRK11128 163 ILTAGVASMLLG 174 (382)
T ss_pred HHHHHHHHHHHH
Confidence 887765555443
No 85
>PRK03545 putative arabinose transporter; Provisional
Probab=95.96 E-value=0.028 Score=48.82 Aligned_cols=87 Identities=11% Similarity=-0.108 Sum_probs=63.9
Q ss_pred HHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhh
Q 029822 35 MLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGI 114 (187)
Q Consensus 35 ~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i 114 (187)
..+++...+.++|.++.-+...+.+.+..+ +.+.+...++....++|..+|+.+.+++-++.|++..|.+
T Consensus 295 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~----------~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~ 364 (390)
T PRK03545 295 WHLSVLSIFWGIAIMCIGLAMQVKVLKLAP----------DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYV 364 (390)
T ss_pred HHHHHHHHHHHHHHhcchHHHHHHHHHhCC----------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHH
Confidence 344445555666776666666666555433 1345678888888899999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCC
Q 029822 115 PAAIMLLSALCFFLASP 131 (187)
Q Consensus 115 ~~v~~~val~~f~~g~~ 131 (187)
.++..+++++.++.-.+
T Consensus 365 ~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 365 GAALALAALVWSILIFR 381 (390)
T ss_pred HHHHHHHHHHHHHHHcc
Confidence 99888888877655443
No 86
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=95.95 E-value=0.031 Score=49.09 Aligned_cols=77 Identities=25% Similarity=0.307 Sum_probs=60.6
Q ss_pred HHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHH
Q 029822 38 YLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAA 117 (187)
Q Consensus 38 ~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v 117 (187)
++...+.++|.|.+.|...++..|.+++ +++.+...+.....++|..+|+.+.+++-+. .|+..|.+.++
T Consensus 92 ~~~r~l~G~~~a~~~pa~~a~i~~~~~~---------~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~ 161 (393)
T PRK11195 92 LLAYGLVGIGAAAYSPAKYGILTELLPG---------EKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCAL 161 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 3455678899999999999999999985 4678888888888999999999988888764 47777777665
Q ss_pred HHHHHHH
Q 029822 118 IMLLSAL 124 (187)
Q Consensus 118 ~~~val~ 124 (187)
..+++.+
T Consensus 162 ~~~~~~~ 168 (393)
T PRK11195 162 IYLLAAL 168 (393)
T ss_pred HHHHHHH
Confidence 5444443
No 87
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=95.93 E-value=0.013 Score=50.88 Aligned_cols=83 Identities=16% Similarity=0.086 Sum_probs=59.8
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
+.+.+++...+.+++.+..-|...++..+ +. +++...+.+.....++|..+++.+..++-+.+||+..|
T Consensus 93 ~~~~l~~~~~l~~~~~~~~~p~~~al~~~-~~----------~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f 161 (382)
T TIGR00902 93 NAWLLFIAIGLFALFFSAGMPIGDALANT-WQ----------KQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNIL 161 (382)
T ss_pred hHHHHHHHHHHHHHHHccchhHHHHHHHH-HH----------HHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHH
Confidence 35566666666777777777777776533 32 23345678888899999999999999999999999999
Q ss_pred hhhHHHHHHHHHHH
Q 029822 113 GIPAAIMLLSALCF 126 (187)
Q Consensus 113 ~i~~v~~~val~~f 126 (187)
.+..+...+.++.+
T Consensus 162 ~~~~~~~~~~~~~~ 175 (382)
T TIGR00902 162 AILTAGLAFMLIGF 175 (382)
T ss_pred HHHHHHHHHHHHHH
Confidence 88766544443333
No 88
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=95.90 E-value=0.024 Score=50.38 Aligned_cols=85 Identities=13% Similarity=0.109 Sum_probs=61.0
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhhe---------
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQ--------- 103 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~--------- 103 (187)
....++++..+.++|.|...+...++..+..++ +++.+..++.....++|+.+++.+.+.+-
T Consensus 93 ~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~ 163 (410)
T TIGR00885 93 NYTLFLVGLFILTAGLGFLETAANPYILVMGPE---------STATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQ 163 (410)
T ss_pred cHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCH---------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchh
Confidence 456778888899999999999888888876543 23445567777778888888887776652
Q ss_pred -----------------eccCcceehhhhHHHHHHHHHHH
Q 029822 104 -----------------DNLGWKVGFGIPAAIMLLSALCF 126 (187)
Q Consensus 104 -----------------~~~gw~~gF~i~~v~~~val~~f 126 (187)
+..+|+..|++.++..++..+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 164 DVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred hhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12479999987776544443333
No 89
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=95.89 E-value=0.026 Score=50.40 Aligned_cols=79 Identities=9% Similarity=0.070 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhH-HHHhhhhhhheeccCcceeh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASS-MVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~-li~~~~~~~i~~~~gw~~gF 112 (187)
...+++...+.+++.|..-|.......+.+++ +++....++++.+.++|. ++++.....+....||+..|
T Consensus 120 ~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~---------~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f 190 (452)
T PRK11273 120 IAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQ---------KERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAAL 190 (452)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHhCCh---------HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHH
Confidence 44566666778888888888888888888764 356778888888999886 44554333333345999999
Q ss_pred hhhHHHHHH
Q 029822 113 GIPAAIMLL 121 (187)
Q Consensus 113 ~i~~v~~~v 121 (187)
.+.++..++
T Consensus 191 ~i~~~~~~~ 199 (452)
T PRK11273 191 YMPAFAAIL 199 (452)
T ss_pred HHHHHHHHH
Confidence 998765444
No 90
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=95.80 E-value=0.044 Score=47.40 Aligned_cols=67 Identities=10% Similarity=-0.008 Sum_probs=52.4
Q ss_pred cccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHHHH
Q 029822 51 IRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALCF 126 (187)
Q Consensus 51 ~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~f 126 (187)
.-+....+..|.+.+ +.+......++++.++|.++++.+.+++.++.||...|.+.++..+++.++.
T Consensus 400 ~~~~~~~~~~~~~p~---------~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~ 466 (481)
T TIGR00879 400 WGPVPWVIVSEIFPL---------SLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFV 466 (481)
T ss_pred ccCeehhhhhccCCh---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHH
Confidence 346666666777763 3566788888899999999999999999999999999998887766655543
No 91
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=95.73 E-value=0.037 Score=54.61 Aligned_cols=63 Identities=10% Similarity=0.067 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheec
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDN 105 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~ 105 (187)
...+++...+.+++.|..-|...++++|.+.++ ++...++++..+.++|.++++.+.+++.+.
T Consensus 103 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---------~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 103 FWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKE---------NLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred HHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcc---------cchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 566777778889999999999999999998752 456788999999999999999988888665
No 92
>PRK15075 citrate-proton symporter; Provisional
Probab=95.69 E-value=0.028 Score=49.76 Aligned_cols=74 Identities=24% Similarity=0.290 Sum_probs=51.8
Q ss_pred HHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhh--------eeccC
Q 029822 36 LLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYI--------QDNLG 107 (187)
Q Consensus 36 ~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i--------~~~~g 107 (187)
.+.++..+.++|.|+.-++...+.+|.++++ +|.....++....++|..++..+...+ .+++|
T Consensus 119 ~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~---------~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~g 189 (434)
T PRK15075 119 LVLLGRLLQGFSAGVELGGVSVYLAEIATPG---------RKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWG 189 (434)
T ss_pred HHHHHHHHhhccccccHHHHHHHHHhhCCcc---------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccc
Confidence 4577788899999999999999999998753 345566666555555555544443333 35789
Q ss_pred cceehhhhHHH
Q 029822 108 WKVGFGIPAAI 118 (187)
Q Consensus 108 w~~gF~i~~v~ 118 (187)
|+..|.+.++.
T Consensus 190 Wr~~f~~~~~~ 200 (434)
T PRK15075 190 WRIPFLIGCLI 200 (434)
T ss_pred hHHHHHHHHHH
Confidence 99999986543
No 93
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=95.62 E-value=0.061 Score=47.03 Aligned_cols=84 Identities=12% Similarity=0.147 Sum_probs=51.9
Q ss_pred HHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhhe-------eccC
Q 029822 35 MLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQ-------DNLG 107 (187)
Q Consensus 35 ~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~-------~~~g 107 (187)
..+++...+..++.+.......++.++..++ + ++|.+...|-.++.++|.+++..+.+.+. +..|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~--~------~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g 171 (437)
T TIGR00792 100 VYAYITYILLGLFYSFVNIPYWSLVPAITLD--P------RERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFG 171 (437)
T ss_pred HHHHHHHHHHHHHHHhhcccHhhCcccccCC--H------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc
Confidence 3344444455666666666666777766542 2 34566777777788888777655433332 3568
Q ss_pred cceehhhhHHHHHHHHHHH
Q 029822 108 WKVGFGIPAAIMLLSALCF 126 (187)
Q Consensus 108 w~~gF~i~~v~~~val~~f 126 (187)
|+..|.+.++..++..++.
T Consensus 172 ~~~~~~i~~~l~~~~~~~~ 190 (437)
T TIGR00792 172 WFMFALVLALIGVVSLIIC 190 (437)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9988888877655554443
No 94
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=95.53 E-value=0.026 Score=51.25 Aligned_cols=93 Identities=15% Similarity=0.220 Sum_probs=74.5
Q ss_pred hhHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCccee
Q 029822 32 SQLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVG 111 (187)
Q Consensus 32 ~~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~g 111 (187)
.+.+.+.+...++++|+...-|...++..++-++ +.+..+...++.+..+|..++..+.....+..+|..-
T Consensus 379 ~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~---------~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~ 449 (475)
T TIGR00924 379 TSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQ---------RLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGV 449 (475)
T ss_pred cCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhH
Confidence 4566777888889999999999999998887553 4678899999999999999998887777777788888
Q ss_pred hhhhHHHHHHHHHHHHhcCCce
Q 029822 112 FGIPAAIMLLSALCFFLASPFY 133 (187)
Q Consensus 112 F~i~~v~~~val~~f~~g~~~y 133 (187)
|...++.+++..++++...+..
T Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~ 471 (475)
T TIGR00924 450 FGKIGLVTLLVGVVMALMVPWL 471 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 8888887777666666555443
No 95
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=95.52 E-value=0.034 Score=48.66 Aligned_cols=78 Identities=10% Similarity=0.038 Sum_probs=60.3
Q ss_pred HHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccC-cceehhhhHHHHHH
Q 029822 43 LMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLG-WKVGFGIPAAIMLL 121 (187)
Q Consensus 43 liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~g-w~~gF~i~~v~~~v 121 (187)
+.++|.|+.-|+......+++.+. +.+...+++.+...++++.+++.+..++.|+.| |..+|.+.+++.++
T Consensus 301 l~g~g~g~~~~~~~~~~~~~~~~~--------~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~ 372 (393)
T PRK09705 301 VCGLGLGGAFPLCLLLALDHSVQP--------AIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVG 372 (393)
T ss_pred HHHHhccchHHHHHHHHHhhcCCH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 456777888787776777776532 356778899999999999999999999999875 88999998887766
Q ss_pred HHHHHHh
Q 029822 122 SALCFFL 128 (187)
Q Consensus 122 al~~f~~ 128 (187)
.++..+.
T Consensus 373 ~~~~~~~ 379 (393)
T PRK09705 373 LMIITLR 379 (393)
T ss_pred HHHHHHH
Confidence 6655433
No 96
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=95.49 E-value=0.1 Score=45.60 Aligned_cols=74 Identities=18% Similarity=0.197 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhH-HHHhhhhhhheeccCcceeh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASS-MVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~-li~~~~~~~i~~~~gw~~gF 112 (187)
...+++...+.++|.+..-+...+...+.+++ +++.....++..+.++|. .+++.+..++.+..||...+
T Consensus 105 ~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~---------~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~ 175 (402)
T TIGR00897 105 YPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQ---------DNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTL 175 (402)
T ss_pred HHHHHHHHHHHHcchHHHHhHHHHHHHHhCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHH
Confidence 34455556666778777666666666676653 356778888889999996 57888778888888865554
Q ss_pred hhhH
Q 029822 113 GIPA 116 (187)
Q Consensus 113 ~i~~ 116 (187)
....
T Consensus 176 ~~~~ 179 (402)
T TIGR00897 176 WSAL 179 (402)
T ss_pred HHHH
Confidence 4443
No 97
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=95.40 E-value=0.03 Score=54.16 Aligned_cols=85 Identities=16% Similarity=0.144 Sum_probs=62.1
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhhee--------
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQD-------- 104 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~-------- 104 (187)
....++++..+.++|.|+.-|....+.++.+.. +.|...+.++.++..+|.+++..+..++-.
T Consensus 254 s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~---------~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~ 324 (742)
T TIGR01299 254 GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQ---------EKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQM 324 (742)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhcc
Confidence 356777888899999999999999999998874 356667778777788888877665433322
Q ss_pred -----ccCcceehhhhHHHHHHHHHHH
Q 029822 105 -----NLGWKVGFGIPAAIMLLSALCF 126 (187)
Q Consensus 105 -----~~gw~~gF~i~~v~~~val~~f 126 (187)
..+|++.|++.++..+++++.+
T Consensus 325 g~~~~~~gWR~l~~i~~lp~ll~ll~~ 351 (742)
T TIGR01299 325 GSAYQFHSWRVFVIVCAFPCVFAIGAL 351 (742)
T ss_pred ccccccccHHHHHHHHHHHHHHHHHHH
Confidence 2368888888777665555443
No 98
>PRK09528 lacY galactoside permease; Reviewed
Probab=95.24 E-value=0.018 Score=50.64 Aligned_cols=81 Identities=12% Similarity=0.099 Sum_probs=55.5
Q ss_pred HHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHH-HHHHhhHhHHHHhhhhhhheeccCcceehhh
Q 029822 36 LLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSW-YYVSVSASSMVAVTLIVYIQDNLGWKVGFGI 114 (187)
Q Consensus 36 ~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~-~Y~~invG~li~~~~~~~i~~~~gw~~gF~i 114 (187)
.+++...+.+++.+...+....++.+.++++ .+...+.. +.++.++|..+++.+..++-|..||+..|.+
T Consensus 317 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~---------~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~ 387 (420)
T PRK09528 317 EVSILKLLHAFEVPFLLVGVFKYITLNFDVR---------LSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLI 387 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc---------ceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHH
Confidence 3444455556666666666666667776532 22333334 4567889999999999999999999999998
Q ss_pred hHHHHHHHHHH
Q 029822 115 PAAIMLLSALC 125 (187)
Q Consensus 115 ~~v~~~val~~ 125 (187)
.++..++..++
T Consensus 388 ~~~~~~i~~~~ 398 (420)
T PRK09528 388 LGGIVLLFTLI 398 (420)
T ss_pred HHHHHHHHHHH
Confidence 77766554444
No 99
>PRK03633 putative MFS family transporter protein; Provisional
Probab=95.22 E-value=0.094 Score=45.41 Aligned_cols=72 Identities=7% Similarity=-0.091 Sum_probs=54.2
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
+...++++..+.++|.|...|...+...+.+.+ +++.+.++++..+.++|..+++.+..++.+...|...+
T Consensus 93 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 163 (381)
T PRK03633 93 GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTS---------RNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPW 163 (381)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHH
Confidence 356677778888899988888776666666553 35677889999999999999999999887764443333
Q ss_pred h
Q 029822 113 G 113 (187)
Q Consensus 113 ~ 113 (187)
.
T Consensus 164 ~ 164 (381)
T PRK03633 164 V 164 (381)
T ss_pred H
Confidence 3
No 100
>PRK10133 L-fucose transporter; Provisional
Probab=95.11 E-value=0.094 Score=46.97 Aligned_cols=60 Identities=12% Similarity=0.068 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhh
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVY 101 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~ 101 (187)
+...+++++.+.++|.|...+...++++|..+++ ++....+.+-....+|..+++.+.+.
T Consensus 116 ~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~---------~~~~~~s~~~~~~~~G~~~g~~~g~~ 175 (438)
T PRK10133 116 NYTLFLVGLFIIAAGLGCLETAANPFVTVLGPES---------SGHFRLNLAQTFNSFGAIIAVVFGQS 175 (438)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChh---------hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677888999999999999999999998754321 22223455555566777777665544
No 101
>PRK15011 sugar efflux transporter B; Provisional
Probab=95.05 E-value=0.039 Score=48.16 Aligned_cols=52 Identities=12% Similarity=0.209 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHHHHHh
Q 029822 77 LKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALCFFL 128 (187)
Q Consensus 77 ~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~f~~ 128 (187)
+.....++....++|..+++.+.+++.+..||+..|.+..+..+++++..+.
T Consensus 338 ~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 338 AGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 3456677777789999999999999999999999999988887777766543
No 102
>PRK03699 putative transporter; Provisional
Probab=94.77 E-value=0.027 Score=49.13 Aligned_cols=77 Identities=9% Similarity=0.155 Sum_probs=55.9
Q ss_pred HHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHH
Q 029822 38 YLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAA 117 (187)
Q Consensus 38 ~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v 117 (187)
.+...+.+++.++.-+...+.+.++.++.. ....++.+.+.++|+.+++.+.+++-+..||...|.+.++
T Consensus 298 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~----------~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~ 367 (394)
T PRK03699 298 LYAILGLGFFSSAIYTTIITLGSQQTKVAS----------PKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANG 367 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCC----------HHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHH
Confidence 334455666666666777777777665322 2235677778899999999999999999999999988777
Q ss_pred HHHHHHH
Q 029822 118 IMLLSAL 124 (187)
Q Consensus 118 ~~~val~ 124 (187)
...++++
T Consensus 368 ~~~~~~~ 374 (394)
T PRK03699 368 LYAVVFV 374 (394)
T ss_pred HHHHHHH
Confidence 6666544
No 103
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=94.70 E-value=0.082 Score=46.18 Aligned_cols=72 Identities=17% Similarity=0.116 Sum_probs=54.7
Q ss_pred HHHHHHHHHHhhcccccccchhhhhhhccCCCCC-cccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcc
Q 029822 35 MLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDG-IKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWK 109 (187)
Q Consensus 35 ~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~-~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~ 109 (187)
..+++...+.++|.|..-+...++.+|..|.++- ..+ +....++..+.++.++|..++..+.+++-+..||.
T Consensus 312 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 312 PLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGV---RAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCc---cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 4455566677788888888899999998765431 111 35677888898999999999999999988877774
No 104
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=94.61 E-value=0.096 Score=48.41 Aligned_cols=84 Identities=19% Similarity=0.153 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhhe------eccC
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQ------DNLG 107 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~------~~~g 107 (187)
.+.+.+-..++++=+++.-|+.....+.-|+++ ++...+.+||-+.++|+.+|.++...++ ...|
T Consensus 134 ~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~---------e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~g 204 (495)
T KOG2533|consen 134 FPGLIALRFLLGLFESGGWPGVVAILGNWYGKS---------ERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAG 204 (495)
T ss_pred hHHHHHHHHHHHHHhcccchHHHHHHHhhcChh---------hhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCC
Confidence 344555567788899999999999999999974 3566778899999999999988777753 3479
Q ss_pred cceehhhhHHHHHH-HHHHH
Q 029822 108 WKVGFGIPAAIMLL-SALCF 126 (187)
Q Consensus 108 w~~gF~i~~v~~~v-al~~f 126 (187)
|++.|++.++.+++ ++++|
T Consensus 205 W~~~FiI~G~i~~~~gi~~f 224 (495)
T KOG2533|consen 205 WRWLFIIEGVITLVLGIVVF 224 (495)
T ss_pred ceeehhHHHHHHHHHHheEE
Confidence 99999999986544 44443
No 105
>PRK11663 regulatory protein UhpC; Provisional
Probab=94.57 E-value=0.07 Score=47.32 Aligned_cols=52 Identities=12% Similarity=0.031 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHHHH
Q 029822 75 SALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALCF 126 (187)
Q Consensus 75 ~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~f 126 (187)
+.+.....+.++..++|..+++.+.+++.+..||...|.+.+++.+++.++.
T Consensus 369 ~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~ 420 (434)
T PRK11663 369 EAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLL 420 (434)
T ss_pred hhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 4567788888999999999999999999999999999999888766655443
No 106
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=94.42 E-value=0.05 Score=48.55 Aligned_cols=51 Identities=20% Similarity=0.240 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHhhHhHHH-HhhhhhhheeccCcceehhhhHHHHHHHHHH
Q 029822 75 SALKSYFSWYYVSVSASSMV-AVTLIVYIQDNLGWKVGFGIPAAIMLLSALC 125 (187)
Q Consensus 75 ~~~~~~F~~~Y~~invG~li-~~~~~~~i~~~~gw~~gF~i~~v~~~val~~ 125 (187)
+.+.+.+.++.+..++|+.+ ++.+.+++.|..||+.+|.+..+..+++++.
T Consensus 379 ~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~ 430 (452)
T PRK11273 379 KAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVIL 430 (452)
T ss_pred hhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 35677888888888998654 7889999999999999999888766665543
No 107
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=94.41 E-value=0.11 Score=48.34 Aligned_cols=91 Identities=20% Similarity=0.161 Sum_probs=74.2
Q ss_pred hhHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCccee
Q 029822 32 SQLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVG 111 (187)
Q Consensus 32 ~~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~g 111 (187)
.+.+.+++...++++|.+...|.-.+.+.+..+++ ++...-++.-...|+.-++|+.+.+.+-...|-...
T Consensus 101 ~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~---------~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~ 171 (524)
T PF05977_consen 101 LSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKE---------DLPAANALNSISFNIARIIGPALGGILVAFFGAAAA 171 (524)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHh---------hHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 45677777778899999999999999999998853 456677888888999999999998888888898999
Q ss_pred hhhhHHHHHHHHHHHHhcCC
Q 029822 112 FGIPAAIMLLSALCFFLASP 131 (187)
Q Consensus 112 F~i~~v~~~val~~f~~g~~ 131 (187)
|++-+++.+++++.+..-++
T Consensus 172 f~inalsfl~~i~~l~~~~~ 191 (524)
T PF05977_consen 172 FLINALSFLISILALLRWKP 191 (524)
T ss_pred HHHHHHHHHHHHHHHHHccc
Confidence 99999988777665544443
No 108
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=94.38 E-value=0.075 Score=51.42 Aligned_cols=72 Identities=7% Similarity=-0.045 Sum_probs=53.6
Q ss_pred hhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHH
Q 029822 45 SLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSAL 124 (187)
Q Consensus 45 avG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~ 124 (187)
++..++..+.+.++.++.|.. +.|...+.|.+...++|+++++.+.+++.+. +....|.+.+++++++.+
T Consensus 659 g~~~~~~~~~~~a~~aEl~Pt---------~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~l 728 (742)
T TIGR01299 659 GGLSIAAWNALDVLTVELYPS---------DKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGL 728 (742)
T ss_pred HHHHHHHHHHHHHHHHHHcCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHH
Confidence 344445556677778888874 4678999999999999999999998877653 456678888777666555
Q ss_pred HH
Q 029822 125 CF 126 (187)
Q Consensus 125 ~f 126 (187)
+.
T Consensus 729 l~ 730 (742)
T TIGR01299 729 LA 730 (742)
T ss_pred HH
Confidence 43
No 109
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=94.35 E-value=0.24 Score=42.93 Aligned_cols=51 Identities=16% Similarity=0.124 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHHHHH
Q 029822 77 LKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALCFF 127 (187)
Q Consensus 77 ~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~f~ 127 (187)
+..+-.++.++..+|.+++..+..++.+++||+..|.+.++..++..+..+
T Consensus 131 ~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~ 181 (390)
T TIGR02718 131 LAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVL 181 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 344455556677999999998888999999999999999987766555433
No 110
>PRK09669 putative symporter YagG; Provisional
Probab=94.29 E-value=0.09 Score=46.72 Aligned_cols=73 Identities=7% Similarity=0.018 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCC-cccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcc
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDG-IKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWK 109 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~-~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~ 109 (187)
...+++...+.++|.|+..+...++.+|..|.++. .++ ++...+|+.+.++.++|..+++.+..++-+..||.
T Consensus 319 ~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~---r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy~ 392 (444)
T PRK09669 319 VWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGR---RLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDYV 392 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCc---CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 45567777788999999999999999999875442 122 34566788889999999999998888887766664
No 111
>PRK03893 putative sialic acid transporter; Provisional
Probab=94.29 E-value=0.11 Score=46.37 Aligned_cols=59 Identities=8% Similarity=0.008 Sum_probs=45.5
Q ss_pred ccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHH
Q 029822 52 RSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIM 119 (187)
Q Consensus 52 kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~ 119 (187)
.+...++..+.+++ +++.+.+.+++...++|+.+++.+.+++.++.||+..|.+.++++
T Consensus 384 ~~~~~~~~~~~~~~---------~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~ 442 (496)
T PRK03893 384 SGLLPKLIGGYFDT---------EQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSL 442 (496)
T ss_pred chhhHHHHHhhCCH---------HHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHH
Confidence 34555566666653 457888999999999999999999999999999988876555443
No 112
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=94.16 E-value=0.097 Score=47.30 Aligned_cols=80 Identities=9% Similarity=0.046 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhhe----e-----
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQ----D----- 104 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~----~----- 104 (187)
...+++...+.++|.++.-+ .....++.|++ ++|......++...|+|+.++..+.+.+. +
T Consensus 124 ~~~l~~~r~l~G~~~~~~~~-~~~~i~~~~~~---------~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 193 (476)
T PLN00028 124 ATGFIAVRFFIGFSLATFVS-CQYWMSTMFNG---------KIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPS 193 (476)
T ss_pred HHHHHHHHHHHHHHHHhhHH-HHHHHHHhcCh---------hheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 34556666677787776543 34456777764 24556667777777778777766555442 2
Q ss_pred ccCcceehhhhHHHHHHHH
Q 029822 105 NLGWKVGFGIPAAIMLLSA 123 (187)
Q Consensus 105 ~~gw~~gF~i~~v~~~val 123 (187)
..||+..|.+.++..++..
T Consensus 194 ~~gWr~~f~i~g~l~l~~~ 212 (476)
T PLN00028 194 FTAWRIAFFVPGLLHIIMG 212 (476)
T ss_pred hhhhHHHHHHHHHHHHHHH
Confidence 2589999999887654433
No 113
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=94.06 E-value=0.033 Score=49.87 Aligned_cols=87 Identities=10% Similarity=0.057 Sum_probs=63.8
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheecc---Ccc
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNL---GWK 109 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~---gw~ 109 (187)
+...+++...+.++|.|..-|......++-|+++ +|...+.++-.+.++|..++..+..++.+.. +|+
T Consensus 121 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---------~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~ 191 (467)
T PRK09556 121 SLGLMIALWALSGFFQSTGGPCSYSTITRWTPRR---------KRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVI 191 (467)
T ss_pred hHHHHHHHHHHHHHHHhccchHHHHHHHHHcCcc---------ceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcch
Confidence 4566677777888999998899999999999863 3455678888889999999988877765543 688
Q ss_pred eehhhhHHHH-HHHHHHHHh
Q 029822 110 VGFGIPAAIM-LLSALCFFL 128 (187)
Q Consensus 110 ~gF~i~~v~~-~val~~f~~ 128 (187)
..|.+.++.. .++++.++.
T Consensus 192 ~~f~~~g~~~~~~~i~~~~~ 211 (467)
T PRK09556 192 GMFIFPSIIALIIGFIGLRY 211 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHh
Confidence 8888866543 344444444
No 114
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.02 E-value=0.43 Score=46.15 Aligned_cols=93 Identities=19% Similarity=0.305 Sum_probs=64.9
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhhee--------
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQD-------- 104 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~-------- 104 (187)
-..+|++|+.+.++|.-.+.+ +|--..|+...+ +....++...|..--+|-.+|.++.++.-.
T Consensus 236 ~~llff~~q~l~GIG~Tpi~t----lGisYiDDnvk~-----~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~ 306 (735)
T KOG3626|consen 236 PFLLFFLGQLLLGIGATPIFT----LGISYIDDNVKK-----KNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLS 306 (735)
T ss_pred hHHHHHHHHHHhhcCCCCCcc----CCCccccccccc-----cCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccC
Confidence 456889999999999866554 444444544322 345668888888888888888777766421
Q ss_pred c-----------cCcceehhhhHHHHHHHHHHHHhcCCcee
Q 029822 105 N-----------LGWKVGFGIPAAIMLLSALCFFLASPFYV 134 (187)
Q Consensus 105 ~-----------~gw~~gF~i~~v~~~val~~f~~g~~~y~ 134 (187)
. -.||+||++++..++++.+.|+.--+.+.
T Consensus 307 ~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 307 PIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred CCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCc
Confidence 1 24999999999998888777766554443
No 115
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=94.00 E-value=0.072 Score=45.43 Aligned_cols=73 Identities=11% Similarity=0.044 Sum_probs=52.6
Q ss_pred HHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccC-cceehhh
Q 029822 36 LLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLG-WKVGFGI 114 (187)
Q Consensus 36 ~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~g-w~~gF~i 114 (187)
.+.+++.+.++..++.-+...++..|.+++ +.+.+.+.+++...++|..+++.+.+++.++.| |..+|..
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 330 VLGLGLFFQQMLVQGIWGILPKHLGEYFPT---------DQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHHHccchhhHHHHHhhhCCc---------chhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 333444444455555566667777777653 356778889999999999999999999999988 8777665
Q ss_pred hHH
Q 029822 115 PAA 117 (187)
Q Consensus 115 ~~v 117 (187)
..+
T Consensus 401 ~~~ 403 (405)
T TIGR00891 401 LSF 403 (405)
T ss_pred hcc
Confidence 443
No 116
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=93.78 E-value=0.5 Score=41.84 Aligned_cols=66 Identities=8% Similarity=0.002 Sum_probs=46.0
Q ss_pred cccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhh------hheeccCcceehhhhHHHHHHHHH
Q 029822 51 IRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIV------YIQDNLGWKVGFGIPAAIMLLSAL 124 (187)
Q Consensus 51 ~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~------~i~~~~gw~~gF~i~~v~~~val~ 124 (187)
.-|+......+.|.. +.|.....+.+...++|..++..+.+ ++.++++|+..|.+-++..+++.+
T Consensus 381 ~~~~~~~~~~e~~p~---------~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (479)
T PRK10077 381 WGPVCWVLLSEIFPN---------AIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAAL 451 (479)
T ss_pred ccchhHHHhHhhCCh---------hHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHH
Confidence 346777777887753 45778888888888888887755555 445678999888887665444444
Q ss_pred H
Q 029822 125 C 125 (187)
Q Consensus 125 ~ 125 (187)
.
T Consensus 452 ~ 452 (479)
T PRK10077 452 F 452 (479)
T ss_pred H
Confidence 3
No 117
>PRK10054 putative transporter; Provisional
Probab=93.70 E-value=0.12 Score=45.32 Aligned_cols=92 Identities=13% Similarity=-0.020 Sum_probs=58.5
Q ss_pred HHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhH
Q 029822 37 LYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPA 116 (187)
Q Consensus 37 ~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~ 116 (187)
+.++..+.++|.+..-|+..++..+.-+++ .+..+|+.+ ...++|..+++.+.+++.|..|....|.+-+
T Consensus 301 ~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~---------~~~~~~~~~-~~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~ 370 (395)
T PRK10054 301 WGMSAAVFTVGEIIYAPGEYMLIDHIAPPG---------MKASYFSAQ-SLGWLGAAINPLVSGVILTTLPPWSLFVILA 370 (395)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhCCcc---------cceehHhHH-HHHHHHHHHHHHHHHHHHHHcChhhHHHHHH
Confidence 344555666677666676666666654421 234455543 3566899999999999999999999998866
Q ss_pred HHHHHHHHHHHhcCCceeecCCCCCh
Q 029822 117 AIMLLSALCFFLASPFYVKSKANTSL 142 (187)
Q Consensus 117 v~~~val~~f~~g~~~y~~~~p~gs~ 142 (187)
+.+.++.+.-+ ++- +.+|.|.|
T Consensus 371 ~~~~~~~~~~~---~~~-~~~~~~~~ 392 (395)
T PRK10054 371 LAIVAAWLLML---KGM-RARPWGQP 392 (395)
T ss_pred HHHHHHHHHHH---hcc-ccCcccCC
Confidence 65555444333 222 23577765
No 118
>PRK09669 putative symporter YagG; Provisional
Probab=93.65 E-value=0.33 Score=43.10 Aligned_cols=84 Identities=12% Similarity=0.196 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhh----he---ecc
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVY----IQ---DNL 106 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~----i~---~~~ 106 (187)
...+++...+..++...+...-.+++++..++. ++|.+..+|.....++|..++..+... +. ...
T Consensus 109 ~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~--------~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~ 180 (444)
T PRK09669 109 IIYACVTYILLSLVYTAINVPYCAMPGAITNDP--------RERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQK 180 (444)
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhh
Confidence 334444444445444456666677888876533 345677788888888888877654322 22 135
Q ss_pred CcceehhhhHHHHHHHHHH
Q 029822 107 GWKVGFGIPAAIMLLSALC 125 (187)
Q Consensus 107 gw~~gF~i~~v~~~val~~ 125 (187)
||+..+.+.++..++..++
T Consensus 181 g~~~~~~i~~ii~~v~~~~ 199 (444)
T PRK09669 181 GYFYAMMVMGLLGVVLFFC 199 (444)
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 7777777666655444433
No 119
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=93.63 E-value=0.18 Score=43.60 Aligned_cols=80 Identities=16% Similarity=-0.060 Sum_probs=55.9
Q ss_pred HHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheecc-Ccceehhhh
Q 029822 37 LYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNL-GWKVGFGIP 115 (187)
Q Consensus 37 ~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~-gw~~gF~i~ 115 (187)
+++...+.+++.++..+...++..+.+++ +.+.+...+++...++|..+++.+.+++-++. +|...|.+.
T Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~---------~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~ 381 (406)
T PRK11551 311 MLLAGFAAGLFVVGGQSVLYALAPLFYPT---------QVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGAS 381 (406)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHcch---------hhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHH
Confidence 34444555666666677777888887764 34677888999999999999999999987764 455556666
Q ss_pred HHHHHHHHHH
Q 029822 116 AAIMLLSALC 125 (187)
Q Consensus 116 ~v~~~val~~ 125 (187)
....+++.+.
T Consensus 382 ~~~~~~~~~~ 391 (406)
T PRK11551 382 IPVILVAALA 391 (406)
T ss_pred HHHHHHHHHH
Confidence 5555554444
No 120
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=92.99 E-value=0.25 Score=43.19 Aligned_cols=79 Identities=16% Similarity=0.015 Sum_probs=55.1
Q ss_pred HHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhh
Q 029822 36 LLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIP 115 (187)
Q Consensus 36 ~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~ 115 (187)
.+++...+.+++.++.-+. .+...+. . + +++...+.+++.+.++|..+++.+..++-+..||...|.+.
T Consensus 318 ~~~~~~~~~G~~~~~~~~~-~~~~~~~-~---~------~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~ 386 (402)
T TIGR00897 318 VALIIAIALGIFLAGYVPL-AAVFPTL-A---P------KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIF 386 (402)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHhh-C---c------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Confidence 3344444555665555332 3333332 2 2 34678889999999999999999999999989999999988
Q ss_pred HHHHHHHHHH
Q 029822 116 AAIMLLSALC 125 (187)
Q Consensus 116 ~v~~~val~~ 125 (187)
+++.+++.++
T Consensus 387 a~~~~i~~~~ 396 (402)
T TIGR00897 387 AALYVVSAFL 396 (402)
T ss_pred HHHHHHHHHH
Confidence 8776665544
No 121
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=92.88 E-value=0.29 Score=44.93 Aligned_cols=86 Identities=24% Similarity=0.347 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccC-cceeh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLG-WKVGF 112 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~g-w~~gF 112 (187)
.+-||+-=.++++..|+..+..-++.++.-.++ +...||..|.+..-..+++++++.+.+.+..| -|.||
T Consensus 380 ~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g---------~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~ 450 (477)
T PF11700_consen 380 PWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPG---------REAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGF 450 (477)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCc---------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHH
Confidence 344666666788999999999999999887753 34779999999999999999999999988775 88999
Q ss_pred hhhHHHHHHHHHHHHh
Q 029822 113 GIPAAIMLLSALCFFL 128 (187)
Q Consensus 113 ~i~~v~~~val~~f~~ 128 (187)
+.-.+.+++++++++.
T Consensus 451 ~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 451 LFLLVLFLIGLILLFF 466 (477)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9888888888877643
No 122
>PRK11010 ampG muropeptide transporter; Validated
Probab=92.67 E-value=0.27 Score=44.71 Aligned_cols=68 Identities=10% Similarity=0.116 Sum_probs=49.6
Q ss_pred cchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHHHHHhc
Q 029822 53 SSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALCFFLA 129 (187)
Q Consensus 53 p~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~f~~g 129 (187)
+...++..+..++.- ....+.+++...++|..++..+.+++.|..||...|.+.+++.+++++....-
T Consensus 335 ~~~~a~~~~l~~~~~---------~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 335 AAFVALLMTLCNKSF---------SATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHcCCCC---------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555555332 23456777788899998888889999999999999999998887877765443
No 123
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=92.48 E-value=0.42 Score=41.93 Aligned_cols=78 Identities=13% Similarity=0.068 Sum_probs=55.4
Q ss_pred HHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhh
Q 029822 35 MLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGI 114 (187)
Q Consensus 35 ~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i 114 (187)
+.++++..+.++|.+...+....+..+..++. ..+..+.++...++|..+|+.+.+++-|.+|+...|..
T Consensus 306 ~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~ 375 (394)
T PRK10213 306 IVATGVAIIWGLTFALVPVGWSTWITRSLADQ----------AEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLML 375 (394)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHCccc----------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHH
Confidence 44555666677788888887777777665421 22344566667788988999999999999999888888
Q ss_pred hHHHHHHH
Q 029822 115 PAAIMLLS 122 (187)
Q Consensus 115 ~~v~~~va 122 (187)
+++...+.
T Consensus 376 ~~~~~~~~ 383 (394)
T PRK10213 376 SGTLMLLT 383 (394)
T ss_pred HHHHHHHH
Confidence 77654433
No 124
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=92.38 E-value=0.21 Score=41.93 Aligned_cols=56 Identities=18% Similarity=0.165 Sum_probs=42.3
Q ss_pred ccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 48 GGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 48 ~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
.++.-+.......+.+++ +.+...+.++....++|..+++.+.+++.+++||+..|
T Consensus 324 ~~~~~~~~~~~~~~~~~~---------~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 324 VYGPQMLIGVIASELAPK---------KAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HhhhhHHHHHHHHHhcCc---------chhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 333334444555666553 35677889999999999999999999999999998775
No 125
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=92.21 E-value=0.23 Score=46.77 Aligned_cols=104 Identities=21% Similarity=0.222 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFG 113 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~ 113 (187)
..+.|+...+..-+ ++.++|+..+.+++|...... .-+.-+|...|+.|++++++..+. .|+
T Consensus 59 nlv~ylt~~~~~~~-~~aa~~v~~f~G~~~~~~l~g-----~~laD~f~gry~tI~~~s~i~~~G------------~~~ 120 (571)
T KOG1237|consen 59 NLVTYLTLELHASG-GGAANNVNAFGGTQFLLPLLG-----AFLADSFLGRYFTINIGSLISLLG------------LFG 120 (571)
T ss_pred HHHHHHHHHhccch-HHHHHHHHHHhhHHHHHHHHH-----HHHHHHHhHHHHHHHHHHHHHHHH------------HHH
Confidence 34455555555555 899999999999999864321 467888999999999999988776 566
Q ss_pred hhHHHHHHHHHHHHhcCCceee-cCCCCChhHHHHHHHHHHHHhcC
Q 029822 114 IPAAIMLLSALCFFLASPFYVK-SKANTSLLSGLIQVLVASYKNRH 158 (187)
Q Consensus 114 i~~v~~~val~~f~~g~~~y~~-~~p~gs~l~~~~~v~~~a~~~~~ 158 (187)
++...++.++..+-+ .+.. ....+++-+.+..++..++....
T Consensus 121 lt~~a~~~~l~p~~~---~~~~~~~~c~~~s~~q~~~~~~~l~lia 163 (571)
T KOG1237|consen 121 LTLSAMIPALLPFMC---KFKPGGNVCESPSKLQLAVLYGALYLIA 163 (571)
T ss_pred HHHHHHhhhcCCccc---cCCCCCCcccCcchHHHHHHHHHHHHhe
Confidence 666666666654443 1111 12344566667777777776543
No 126
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=92.18 E-value=0.49 Score=43.38 Aligned_cols=86 Identities=9% Similarity=-0.039 Sum_probs=54.2
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhhe-----e---
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQ-----D--- 104 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~-----~--- 104 (187)
+...+++.-.++++| |+.-+.....+.+.|++ +++.....++-...|+|..++..+.+.+- .
T Consensus 127 s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~---------~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G 196 (462)
T PRK15034 127 PFGIFIVIALLCGFA-GANFASSMGNISFFFPK---------AKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLG 196 (462)
T ss_pred CHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCH---------hHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 456777777788887 55667788888899985 34566677776667777766655554422 1
Q ss_pred ----------ccCcceehhhhHHHHHHHHHHHHh
Q 029822 105 ----------NLGWKVGFGIPAAIMLLSALCFFL 128 (187)
Q Consensus 105 ----------~~gw~~gF~i~~v~~~val~~f~~ 128 (187)
..+|+.++.+-.+..+++.+.+++
T Consensus 197 ~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~ 230 (462)
T PRK15034 197 VNGVPQADGSVMSLANAAWIWVPLLAIATIAAWS 230 (462)
T ss_pred cccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 234555555555555455544444
No 127
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=91.92 E-value=0.044 Score=51.02 Aligned_cols=92 Identities=15% Similarity=0.257 Sum_probs=2.7
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhhee--------
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQD-------- 104 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~-------- 104 (187)
-..+|++|.++.++|...+-+--.+ ..||.-++ ++-.-+...+|..-.+|..+|.++.++.-.
T Consensus 140 ~~~~f~~gq~l~GiG~~pl~tLG~t----YiDDnv~~-----~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~ 210 (539)
T PF03137_consen 140 YFYVFILGQLLIGIGATPLYTLGIT----YIDDNVSK-----KNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKV 210 (539)
T ss_dssp ------------SSS-----------------------------------------------------------------
T ss_pred HHHHHHHHHHHHhccccCCccceee----eecccccc-----ccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccc
Confidence 3577888999999998776654444 44443321 344567788888888888888766654321
Q ss_pred c-------------c-CcceehhhhHHHHHHHHHHHHhcCCce
Q 029822 105 N-------------L-GWKVGFGIPAAIMLLSALCFFLASPFY 133 (187)
Q Consensus 105 ~-------------~-gw~~gF~i~~v~~~val~~f~~g~~~y 133 (187)
. + .||+||++.++..++..+.++.-.+..
T Consensus 211 ~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~l 253 (539)
T PF03137_consen 211 PPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKL 253 (539)
T ss_dssp -------------------------------------------
T ss_pred cccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccC
Confidence 0 2 399999999988777666655544443
No 128
>PRK09952 shikimate transporter; Provisional
Probab=91.78 E-value=0.52 Score=41.92 Aligned_cols=81 Identities=14% Similarity=0.009 Sum_probs=55.3
Q ss_pred HHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHH-hhHhHHHHhhhhhhheecc--Ccceehhhh
Q 029822 39 LAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVS-VSASSMVAVTLIVYIQDNL--GWKVGFGIP 115 (187)
Q Consensus 39 ~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~-invG~li~~~~~~~i~~~~--gw~~gF~i~ 115 (187)
+.+.+.+++.|...+...++.+|.|+. +.|.+...+-|.. ..+|+.+++.+..++.+.. +|...|...
T Consensus 348 ~~~~l~~~~~~~~~~~~~~~~~e~~p~---------~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~ 418 (438)
T PRK09952 348 FSIMLANIAHDMVVCVQQPMFTEMFGA---------SYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYL 418 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCc---------chhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHH
Confidence 344445667777777778888898875 2455566665554 4588888999998887643 577778777
Q ss_pred HHHHHHHHHHHHh
Q 029822 116 AAIMLLSALCFFL 128 (187)
Q Consensus 116 ~v~~~val~~f~~ 128 (187)
+++.+++.+..+.
T Consensus 419 ~~~~~i~~v~~~~ 431 (438)
T PRK09952 419 LAGCLISAMTALL 431 (438)
T ss_pred HHHHHHHHHHHHH
Confidence 7776666655443
No 129
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=91.78 E-value=0.53 Score=42.11 Aligned_cols=53 Identities=13% Similarity=-0.024 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHhhH-hHHHHhhhhhhhee------------ccCcceehhhhHHHHHHHHHHHH
Q 029822 75 SALKSYFSWYYVSVSA-SSMVAVTLIVYIQD------------NLGWKVGFGIPAAIMLLSALCFF 127 (187)
Q Consensus 75 ~~~~~~F~~~Y~~inv-G~li~~~~~~~i~~------------~~gw~~gF~i~~v~~~val~~f~ 127 (187)
+.+...........++ |..+++.+++++.| ..||..+|.+..++++++++.++
T Consensus 381 ~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 381 KAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred hhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 3566777778788886 77889999999988 67899999998888888766544
No 130
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=91.63 E-value=0.67 Score=43.94 Aligned_cols=83 Identities=10% Similarity=0.045 Sum_probs=46.5
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
....+..|..+.++|.|... ......+|.... |.|...+.+..+..-+...+++.+.-.+-.+.+||+.|
T Consensus 130 ~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~---------k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~ 199 (599)
T PF06609_consen 130 NMNTFIAGMVLYGVGAGVQE-LAALAISELVPN---------KWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIF 199 (599)
T ss_pred cHHHHHHHHHHHHHhhHHHH-HHHHHHHHhccc---------chhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHH
Confidence 44567788889899987765 345556777642 12222222222211111112223322333456999999
Q ss_pred hhhHHHHHHHHHH
Q 029822 113 GIPAAIMLLSALC 125 (187)
Q Consensus 113 ~i~~v~~~val~~ 125 (187)
.+..+...++++.
T Consensus 200 ~~~~i~~~i~~vl 212 (599)
T PF06609_consen 200 YIFIIWSGIALVL 212 (599)
T ss_pred HHHHHHHHHHHHH
Confidence 9999876666654
No 131
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=91.37 E-value=0.59 Score=42.87 Aligned_cols=75 Identities=15% Similarity=0.183 Sum_probs=60.3
Q ss_pred HHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheec-cCcceehhh
Q 029822 36 LLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDN-LGWKVGFGI 114 (187)
Q Consensus 36 ~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~-~gw~~gF~i 114 (187)
.+.+..++.++|.|..-|++..+.++=... +.+..+....+-+..+|.+++.-+.+++-+. .||+..|.+
T Consensus 130 ~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~---------~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~ 200 (466)
T KOG2532|consen 130 LLLVLRFLQGLGQGVLFPAIGSILAKWAPP---------NERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYV 200 (466)
T ss_pred hhHHHHHHhHHHHhHHHhhhhceeeeECCH---------HHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHH
Confidence 445566677788888888888777766654 3567888999989999999999888998887 999999998
Q ss_pred hHHHH
Q 029822 115 PAAIM 119 (187)
Q Consensus 115 ~~v~~ 119 (187)
-++.-
T Consensus 201 ~g~~g 205 (466)
T KOG2532|consen 201 FGIVG 205 (466)
T ss_pred HHHHH
Confidence 88743
No 132
>PF13347 MFS_2: MFS/sugar transport protein
Probab=91.30 E-value=0.43 Score=42.12 Aligned_cols=92 Identities=17% Similarity=0.129 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhh----eec---
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYI----QDN--- 105 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i----~~~--- 105 (187)
+...+++...+..++...+.-+-.+++.|..++.+ +|....+|-.++.++|.++...+.+.+ .+.
T Consensus 102 ~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~--------~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~ 173 (428)
T PF13347_consen 102 KLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPD--------ERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTS 173 (428)
T ss_pred HHHHHHHHHHHHHHhhhhccCchhhcCccccccHh--------hhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccc
Confidence 44445666666788888888888899999877543 344555555556666665444444433 322
Q ss_pred cCcceehhhhHHHHHHHHHHHHhcCCc
Q 029822 106 LGWKVGFGIPAAIMLLSALCFFLASPF 132 (187)
Q Consensus 106 ~gw~~gF~i~~v~~~val~~f~~g~~~ 132 (187)
.+|+....+.++..++..++.+...|.
T Consensus 174 ~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 174 NGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred hHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 168888777777666666655554444
No 133
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=91.27 E-value=0.88 Score=39.46 Aligned_cols=72 Identities=6% Similarity=-0.083 Sum_probs=48.0
Q ss_pred HHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHH
Q 029822 41 FGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIML 120 (187)
Q Consensus 41 L~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~ 120 (187)
..+.+++.+...|....+..|. . +++...|++.....++|..+++.+...+.+ .||+..|.+.++..+
T Consensus 106 ~~~~g~~~~~~~~~~~~~~~~~-~----------~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~ 173 (396)
T TIGR00882 106 GLYLGFVFSAGAGAIEAYIEKV-S----------RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFAL 173 (396)
T ss_pred HHHHHHHhccchhhHHHHHHHh-h----------hhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHH
Confidence 3445566666666665554432 1 111235677778899999999999888865 599999998877655
Q ss_pred HHHH
Q 029822 121 LSAL 124 (187)
Q Consensus 121 val~ 124 (187)
+..+
T Consensus 174 ~~~~ 177 (396)
T TIGR00882 174 ILML 177 (396)
T ss_pred HHHH
Confidence 5443
No 134
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=91.21 E-value=0.41 Score=41.49 Aligned_cols=70 Identities=14% Similarity=0.147 Sum_probs=51.0
Q ss_pred cccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHH
Q 029822 47 GGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSAL 124 (187)
Q Consensus 47 G~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~ 124 (187)
+.|..-+...+...+..+++ +.+.+.+.++....++|..+++.+..++.|..||...|.+.++..+++++
T Consensus 316 ~~g~~~~~~~~~~~~~~~~~--------~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 316 ITGITSVAIYTAFMRFAGDG--------DQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHhCcc--------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 34444455555555554431 24566778888888999999999999999999999999988876666554
No 135
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=91.13 E-value=0.26 Score=43.35 Aligned_cols=78 Identities=13% Similarity=0.100 Sum_probs=52.5
Q ss_pred HHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheecc---C-cceehh
Q 029822 38 YLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNL---G-WKVGFG 113 (187)
Q Consensus 38 ~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~---g-w~~gF~ 113 (187)
.+...+.++|.+...|...+...+..+++ ++.+.+.++.++.++|..+++.+.+++-|+. + ....|.
T Consensus 301 ~~~~~l~~~g~~~~~p~~~~~~~~~~p~~---------~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~ 371 (400)
T PRK11646 301 FTLICLFYIGSIIAEPARETLSASLADAR---------ARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWM 371 (400)
T ss_pred HHHHHHHHHHHHHHHccHHHHHHhcCCcc---------cchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHH
Confidence 33344556777778888888888877643 4566778888889999999999999987763 2 234454
Q ss_pred hhHHHHHHHHH
Q 029822 114 IPAAIMLLSAL 124 (187)
Q Consensus 114 i~~v~~~val~ 124 (187)
+..+..++..+
T Consensus 372 ~~~~~~~~~~~ 382 (400)
T PRK11646 372 MLGIIGLITLL 382 (400)
T ss_pred HHHHHHHHHHH
Confidence 44443333333
No 136
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=91.08 E-value=0.37 Score=43.53 Aligned_cols=53 Identities=8% Similarity=0.078 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHHHHHhcC
Q 029822 77 LKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALCFFLAS 130 (187)
Q Consensus 77 ~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~f~~g~ 130 (187)
+.....+...+.++|+.+++.+.. .++..+|..+|.+.++.++++.+++++.+
T Consensus 381 ~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 381 LGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred chhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 445556666677888877766543 34456799999999988888877766654
No 137
>PRK11462 putative transporter; Provisional
Probab=90.98 E-value=1.4 Score=39.70 Aligned_cols=83 Identities=18% Similarity=0.301 Sum_probs=46.9
Q ss_pred HHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheec-------cCcc
Q 029822 37 LYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDN-------LGWK 109 (187)
Q Consensus 37 ~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~-------~gw~ 109 (187)
+++...+..++.-.+.-.-.+++++.-++. ++|.+..+|..++.++|.+++....+.+... .||.
T Consensus 112 ~~~~~~~~~~~~t~~~ipy~al~~~lt~d~--------~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~ 183 (460)
T PRK11462 112 AAITYTLLTLLYTVVNIPYCALGGVITNDP--------TQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQ 183 (460)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHhcCCH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHH
Confidence 333333445555555556666777765542 4567788888888888887775554332221 3566
Q ss_pred eehhhhHHHHHHHHHHHH
Q 029822 110 VGFGIPAAIMLLSALCFF 127 (187)
Q Consensus 110 ~gF~i~~v~~~val~~f~ 127 (187)
....+.++..++..++.+
T Consensus 184 ~~~~i~~ii~~i~~~i~~ 201 (460)
T PRK11462 184 GGIAVLSVVAFMMLAFCF 201 (460)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 655555554444443333
No 138
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=90.78 E-value=1.9 Score=38.89 Aligned_cols=80 Identities=24% Similarity=0.130 Sum_probs=55.0
Q ss_pred HHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHH
Q 029822 38 YLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAA 117 (187)
Q Consensus 38 ~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v 117 (187)
.+.+.+..+|.....-..-++..+.-+++.. . +...=++.|.+.++|++++....+++-++.+++..|.++++
T Consensus 90 ~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~------~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~ 162 (433)
T PF03092_consen 90 VVLLFLASFGYAFADVAADALVVELARREPE------S-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAA 162 (433)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHhhcCCc------h-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHH
Confidence 3444455566666555555555555433221 2 44455788889999999998888899999999999999987
Q ss_pred HHHHHHH
Q 029822 118 IMLLSAL 124 (187)
Q Consensus 118 ~~~val~ 124 (187)
...+..+
T Consensus 163 ~~~l~~~ 169 (433)
T PF03092_consen 163 LPLLMLI 169 (433)
T ss_pred HHHHHHH
Confidence 6555543
No 139
>PRK09848 glucuronide transporter; Provisional
Probab=90.54 E-value=0.54 Score=41.72 Aligned_cols=72 Identities=17% Similarity=0.242 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCC-cccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCc
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDG-IKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGW 108 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~-~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw 108 (187)
.+.+++++.+.++|.|...+...++.+|.-|.++- ..+ ++...+++.+.++..+|..++..+.+++-+..||
T Consensus 319 ~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~---r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 319 LPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGV---RIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCc---cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 45566777888999999999999999888765431 111 3456677888888999999988877766544444
No 140
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=90.53 E-value=0.46 Score=41.93 Aligned_cols=45 Identities=20% Similarity=0.211 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHhhHhHHHHhhhhhhheeccC-cceehhhhHHHH
Q 029822 75 SALKSYFSWYYVSVSASSMVAVTLIVYIQDNLG-WKVGFGIPAAIM 119 (187)
Q Consensus 75 ~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~g-w~~gF~i~~v~~ 119 (187)
+.+...+.+.+...++|..+++.+.+.+.+..| |..+|.+.++..
T Consensus 365 ~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 365 QARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 567888999999999999999999999999874 999998777643
No 141
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=90.48 E-value=0.9 Score=41.43 Aligned_cols=77 Identities=16% Similarity=0.216 Sum_probs=56.2
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheec-cCccee
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDN-LGWKVG 111 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~-~gw~~g 111 (187)
....+++|.++.++|.|+....++.+++|-=.+ +.|...-+.+...+++|.+++..+....++. ++||..
T Consensus 141 ~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~---------~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~ 211 (513)
T KOG0254|consen 141 SWYQLIVGRILTGLGVGGASVLAPVYISEIAPA---------HIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIP 211 (513)
T ss_pred hHHHHHHHHHHhccchhhhhhcchhhHhhcCCh---------hhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHH
Confidence 567889999999999999997777766665332 3556666667778889999995554444443 599988
Q ss_pred hhhhHHH
Q 029822 112 FGIPAAI 118 (187)
Q Consensus 112 F~i~~v~ 118 (187)
+++..+.
T Consensus 212 ~~~~~i~ 218 (513)
T KOG0254|consen 212 LGLALIP 218 (513)
T ss_pred HHHHHHH
Confidence 7776664
No 142
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=90.38 E-value=0.65 Score=41.69 Aligned_cols=87 Identities=24% Similarity=0.295 Sum_probs=69.3
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheecc-Cccee
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNL-GWKVG 111 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~-gw~~g 111 (187)
....+|.+-.++++|.+....-+++++-+.|.+ +.......|-.+.++|+.++....+.+.++. ||+.+
T Consensus 98 ~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk----------~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~a 167 (395)
T COG2807 98 GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPK----------RVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGA 167 (395)
T ss_pred cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhccc----------chhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHH
Confidence 456677777788888888888888888888873 5566778888999999999999888887776 79999
Q ss_pred hhhhHHHHHHHHHHHHhc
Q 029822 112 FGIPAAIMLLSALCFFLA 129 (187)
Q Consensus 112 F~i~~v~~~val~~f~~g 129 (187)
.++=++.-++++++.+-.
T Consensus 168 L~~WAl~allAl~~WlPq 185 (395)
T COG2807 168 LGFWALLALLALLIWLPQ 185 (395)
T ss_pred HHHHHHHHHHHHHHHhhh
Confidence 888887777777765554
No 143
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=90.38 E-value=0.14 Score=43.16 Aligned_cols=76 Identities=17% Similarity=0.050 Sum_probs=52.7
Q ss_pred HHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHH-HHhhHhHHHHhhhhhhheeccC-cceeh
Q 029822 35 MLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYY-VSVSASSMVAVTLIVYIQDNLG-WKVGF 112 (187)
Q Consensus 35 ~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y-~~invG~li~~~~~~~i~~~~g-w~~gF 112 (187)
..++..+.+.+++.|...+...++..|.++++. +.+.+...| ++..+|..+++.+..++-++.| |+..+
T Consensus 313 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~---------~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~ 383 (394)
T TIGR00883 313 TLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV---------RYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIG 383 (394)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc---------eeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHH
Confidence 445555666777788888888999999887532 233445433 4566788889999999988888 77665
Q ss_pred hhhHHHH
Q 029822 113 GIPAAIM 119 (187)
Q Consensus 113 ~i~~v~~ 119 (187)
...++..
T Consensus 384 ~~~~~~~ 390 (394)
T TIGR00883 384 YYLAALA 390 (394)
T ss_pred HHHHHHH
Confidence 5555443
No 144
>PF13347 MFS_2: MFS/sugar transport protein
Probab=90.37 E-value=0.68 Score=40.87 Aligned_cols=75 Identities=16% Similarity=0.166 Sum_probs=58.7
Q ss_pred hhHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCc-ccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcc
Q 029822 32 SQLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGI-KSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWK 109 (187)
Q Consensus 32 ~~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~-~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~ 109 (187)
.+.+.+++...+.++|.|+......++.+|.-|.++-+ ++ ++...+++.+-+...+|..++..+...+-+..||.
T Consensus 313 ~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~---r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 313 GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGR---RREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCC---CchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 35677888888999999999999999999998865421 12 45677888888899999999988888776655554
No 145
>PRK09528 lacY galactoside permease; Reviewed
Probab=90.14 E-value=0.43 Score=41.85 Aligned_cols=48 Identities=8% Similarity=0.082 Sum_probs=36.4
Q ss_pred HHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHHHHHh
Q 029822 80 YFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALCFFL 128 (187)
Q Consensus 80 ~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~f~~ 128 (187)
.+.......++|..+++.+.+++.+ .+|+..|.+.++..+++++.++.
T Consensus 142 ~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~ 189 (420)
T PRK09528 142 EYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFF 189 (420)
T ss_pred cchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhc
Confidence 4566667789999999998888876 58999999888766665555444
No 146
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=89.93 E-value=0.51 Score=39.40 Aligned_cols=65 Identities=17% Similarity=0.190 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccC
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLG 107 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~g 107 (187)
...+++...+.++|.|...+...++..|.+++ +.+.+.+..++...++|..+++.+.+++.|++|
T Consensus 301 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---------~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 301 FPLFLVLWFAIGVGYGPINVPQGTLLQRRVPA---------ELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 45667777888899998888888888888763 467889999999999999999999988877653
No 147
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=89.89 E-value=0.92 Score=40.32 Aligned_cols=54 Identities=19% Similarity=0.144 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHhhHhHHHHhhhhhhheecc---CcceehhhhHHHHHHHHHHHHh
Q 029822 75 SALKSYFSWYYVSVSASSMVAVTLIVYIQDNL---GWKVGFGIPAAIMLLSALCFFL 128 (187)
Q Consensus 75 ~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~---gw~~gF~i~~v~~~val~~f~~ 128 (187)
+..........+..++|+++++.+++++.+.. +|..+|.+.++..+++.+.+..
T Consensus 392 ~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 392 RFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 35666777778889999999999999887653 4888999988888887766544
No 148
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=89.84 E-value=0.92 Score=39.35 Aligned_cols=82 Identities=16% Similarity=0.104 Sum_probs=59.1
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHH-HHhhHhHHHHhhhhhhheeccCccee
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYY-VSVSASSMVAVTLIVYIQDNLGWKVG 111 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y-~~invG~li~~~~~~~i~~~~gw~~g 111 (187)
....+++...+-++..|.+-+....+..++ ++ +.+..+...|. .+..+|..+++.+.+++.|++|+ ..
T Consensus 292 ~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~---------~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~ 360 (382)
T TIGR00902 292 AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PG---------SEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GT 360 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CH---------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HH
Confidence 345566677788888888888888777765 32 23344555554 36779999999999999999987 66
Q ss_pred hhhhHHHHHHHHHH
Q 029822 112 FGIPAAIMLLSALC 125 (187)
Q Consensus 112 F~i~~v~~~val~~ 125 (187)
|.+.++..++++++
T Consensus 361 ~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 361 FVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777766666554
No 149
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=89.80 E-value=0.32 Score=43.13 Aligned_cols=52 Identities=17% Similarity=0.252 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHhhHhH-HHHhhhhhhheeccCcceehhhhHHHHHHHHHHHH
Q 029822 76 ALKSYFSWYYVSVSASS-MVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALCFF 127 (187)
Q Consensus 76 ~~~~~F~~~Y~~invG~-li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~f~ 127 (187)
.+.....+++...++|+ ++++.+.+++-++.||..+|.+.++..+++++..+
T Consensus 378 ~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 430 (438)
T TIGR00712 378 AAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 430 (438)
T ss_pred heeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 45667788877788875 67899999999999999999888776666665544
No 150
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=88.79 E-value=2.6 Score=38.15 Aligned_cols=50 Identities=16% Similarity=0.098 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHhhHhHHHHhhhhhhheec----------cCcceehhhhHHHHHHHHH
Q 029822 75 SALKSYFSWYYVSVSASSMVAVTLIVYIQDN----------LGWKVGFGIPAAIMLLSAL 124 (187)
Q Consensus 75 ~~~~~~F~~~Y~~invG~li~~~~~~~i~~~----------~gw~~gF~i~~v~~~val~ 124 (187)
+.|.....+.+...++|+++++.+.+++.+. .++...|.+-++..+++.+
T Consensus 424 ~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i 483 (502)
T TIGR00887 424 RYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGIL 483 (502)
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHH
Confidence 5678899999999999999999999998773 3444556666655555443
No 151
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=88.66 E-value=1 Score=40.84 Aligned_cols=100 Identities=10% Similarity=0.058 Sum_probs=63.3
Q ss_pred chhHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhhee------
Q 029822 31 GSQLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQD------ 104 (187)
Q Consensus 31 ~~~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~------ 104 (187)
.....+|.++|.+++.|.|..+....+++.+..+++.. ..|-..-.-| ..+|+.+++.+..++-.
T Consensus 101 ~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a------~~rlnl~q~f---n~lGa~~gp~~g~~lils~~~~~ 171 (422)
T COG0738 101 SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESA------AFRLNLAQAF---NGLGAILGPLLGSSLILSGVALT 171 (422)
T ss_pred hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhH------HHHHHHHHHh---hhhHHHHHHHHHHHHHHhhhhhc
Confidence 34567888899999999999999999999999886532 2222222222 45677777666666543
Q ss_pred -------------ccCcceehhhhHHH-HHHHHHHHHhcCCceeecCCC
Q 029822 105 -------------NLGWKVGFGIPAAI-MLLSALCFFLASPFYVKSKAN 139 (187)
Q Consensus 105 -------------~~gw~~gF~i~~v~-~~val~~f~~g~~~y~~~~p~ 139 (187)
-..|+..|.+-+.. .+++++++..+.+.-....|+
T Consensus 172 ~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~ 220 (422)
T COG0738 172 MSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPS 220 (422)
T ss_pred cCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCccccc
Confidence 12477777766653 444555444444544433333
No 152
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=88.55 E-value=2 Score=38.91 Aligned_cols=81 Identities=15% Similarity=0.057 Sum_probs=61.9
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
....+.+...+.+++.++.-.+...+.+|.+.+ +.|...-++ +.....|+.+++...+|+-. +||+-+
T Consensus 170 ~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~---------~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~ 237 (521)
T KOG0255|consen 170 NYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSP---------KQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLF 237 (521)
T ss_pred cHHHHHHHHHHHHhhccchhHHhHhhheeecCc---------chhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHH
Confidence 456677777788899999999999999999885 345556566 66777777778888888877 899999
Q ss_pred hhhHHHHHHHHHH
Q 029822 113 GIPAAIMLLSALC 125 (187)
Q Consensus 113 ~i~~v~~~val~~ 125 (187)
++..+.-++.++.
T Consensus 238 ~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 238 WIISIPSGLFLLL 250 (521)
T ss_pred HHHHHHHHHHHHH
Confidence 9988765555444
No 153
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=88.03 E-value=0.56 Score=40.11 Aligned_cols=70 Identities=13% Similarity=0.121 Sum_probs=54.3
Q ss_pred HHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHH
Q 029822 39 LAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAI 118 (187)
Q Consensus 39 ~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~ 118 (187)
.++.++++|.+.+.|+..+...+.+.++. ...+.. .....+|+.+.+.+..++.|..|.+.+|.++.++
T Consensus 235 ~~~~l~g~~~s~i~P~~~s~a~~~~~~~~--------~~asai---~~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 235 WFVLALGLFNSIMFPTIFSLALNALGRHT--------SQGSGI---LCLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhh--------hhhHHH---HHHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 35667889999999999999999887532 223333 2456789999999999999999999999877765
Q ss_pred H
Q 029822 119 M 119 (187)
Q Consensus 119 ~ 119 (187)
.
T Consensus 304 ~ 304 (310)
T TIGR01272 304 Y 304 (310)
T ss_pred H
Confidence 4
No 154
>PRK10429 melibiose:sodium symporter; Provisional
Probab=87.90 E-value=1 Score=40.57 Aligned_cols=72 Identities=17% Similarity=0.194 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCC-CcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCc
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGD-GIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGW 108 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~-~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw 108 (187)
..++++...+.++|.|..-+...++.+|.-|.++ ..++ ++...+|+++-++..+|..++..+.+++-+..||
T Consensus 324 ~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~---R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 324 ALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGI---RCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCc---cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3455666677888899888888999999977543 1122 3456688888889999999998888887665555
No 155
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=87.81 E-value=1.5 Score=39.64 Aligned_cols=75 Identities=5% Similarity=-0.049 Sum_probs=43.9
Q ss_pred HHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheecc-Ccceehh
Q 029822 35 MLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNL-GWKVGFG 113 (187)
Q Consensus 35 ~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~-gw~~gF~ 113 (187)
..++++..+.+++.|+.-+...+...+.|.+ +.|.....+.|...++++.+++.+..++.+.. +|+..+.
T Consensus 343 ~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~---------~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~ 413 (490)
T PRK10642 343 GLIFAGLLMLAVILNCFTGVMASTLPAMFPT---------HIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAY 413 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHH
Confidence 3444555555555555455556666676653 24556677766656666677888888887654 4555444
Q ss_pred hhHHH
Q 029822 114 IPAAI 118 (187)
Q Consensus 114 i~~v~ 118 (187)
+..+.
T Consensus 414 ~~~~~ 418 (490)
T PRK10642 414 YLMVV 418 (490)
T ss_pred HHHHH
Confidence 33333
No 156
>PRK10429 melibiose:sodium symporter; Provisional
Probab=87.72 E-value=2.7 Score=37.81 Aligned_cols=82 Identities=7% Similarity=0.084 Sum_probs=43.8
Q ss_pred HHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhh-hh---e---eccCcce
Q 029822 38 YLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIV-YI---Q---DNLGWKV 110 (187)
Q Consensus 38 ~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~-~i---~---~~~gw~~ 110 (187)
++...+..++...+...-.+++++.-++. ++|.+.++|-.+..|+|+++...+.. .+ . +..||+.
T Consensus 110 ~~~~~l~~~~~t~~~ip~~al~~~lt~~~--------~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~ 181 (473)
T PRK10429 110 CVTYILWGMTYTIMDIPFWSLVPTLTLDK--------REREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQM 181 (473)
T ss_pred HHHHHHHHHHHHHHcchHHhhhHHhCCCH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHH
Confidence 33333445566666666777777765432 34556666656667777665544332 22 1 1235665
Q ss_pred ehhhhHHHHHHHHHHHH
Q 029822 111 GFGIPAAIMLLSALCFF 127 (187)
Q Consensus 111 gF~i~~v~~~val~~f~ 127 (187)
...+.++.+++..++-+
T Consensus 182 ~~~i~~~~~~~~~~~~~ 198 (473)
T PRK10429 182 FTLVLIAFFIVSTIITL 198 (473)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 55555555544444333
No 157
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=87.33 E-value=0.45 Score=41.29 Aligned_cols=46 Identities=17% Similarity=0.280 Sum_probs=37.2
Q ss_pred HHHH-HHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHHH
Q 029822 80 YFSW-YYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALC 125 (187)
Q Consensus 80 ~F~~-~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~ 125 (187)
.+.. +.++.++|+.+++.+.+++-+..||...|.+.++..++..++
T Consensus 344 ~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 344 IYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred eehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 3444 446899999999999999999999999999988876665544
No 158
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=87.00 E-value=1.3 Score=41.20 Aligned_cols=54 Identities=24% Similarity=0.262 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHHHHHh
Q 029822 75 SALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALCFFL 128 (187)
Q Consensus 75 ~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~f~~ 128 (187)
..+.+.++.|.+..+.+..+|..+.+++.+.+|-...+.+++++++++.++.+.
T Consensus 339 ~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~ 392 (524)
T PF05977_consen 339 WVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALR 392 (524)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 578899999999999888899999999999999999999999888777776544
No 159
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=86.85 E-value=2.1 Score=37.19 Aligned_cols=72 Identities=10% Similarity=-0.112 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhh
Q 029822 35 MLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGI 114 (187)
Q Consensus 35 ~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i 114 (187)
..+++++.+.++|.|..-+.......+..+ +.+.+.+..+++..++|..++..+..++-+..++....+.
T Consensus 310 ~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~----------~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~ 379 (406)
T PRK15402 310 LWLTAGLSLYAFGIGLANAGLYRLTLFSSD----------VSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLF 379 (406)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHhhhcc----------ccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHH
Confidence 445667777888888877766554433222 1345677777777888888888888888777776554444
Q ss_pred hH
Q 029822 115 PA 116 (187)
Q Consensus 115 ~~ 116 (187)
++
T Consensus 380 ~~ 381 (406)
T PRK15402 380 NL 381 (406)
T ss_pred HH
Confidence 43
No 160
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=86.78 E-value=2.2 Score=36.85 Aligned_cols=73 Identities=12% Similarity=0.033 Sum_probs=50.9
Q ss_pred HHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhh
Q 029822 35 MLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGI 114 (187)
Q Consensus 35 ~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i 114 (187)
..+..+..+.++|.|..-|...+...+.+++ .+......+....++|..++..+..++.++..+..+..+
T Consensus 300 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~ 369 (394)
T PRK11652 300 WTLLVPAALFFFGAGMLFPLATSGAMEPFPY----------LAGTAGALLGGLQNIGSGLAALLSAMLPQTGQFSLGLLM 369 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccc----------cchHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHH
Confidence 4456666777888888888888888777653 223345666667789999999888888777655554444
Q ss_pred hHH
Q 029822 115 PAA 117 (187)
Q Consensus 115 ~~v 117 (187)
..+
T Consensus 370 ~~~ 372 (394)
T PRK11652 370 TLM 372 (394)
T ss_pred HHH
Confidence 433
No 161
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=86.67 E-value=2.1 Score=39.83 Aligned_cols=82 Identities=13% Similarity=0.066 Sum_probs=65.1
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCccee-
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVG- 111 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~g- 111 (187)
....+.+..++.++|+|+.- .....++.-|++ +.|.+..+++..+.++|.+++..+..++. ++||+.=
T Consensus 114 Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~---------kER~ratsi~~sg~~vG~~Ia~~L~qll~-s~gWr~y~ 182 (511)
T TIGR00806 114 SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPP---------SRYQRAAAYSRAAVLLGVFLSSVLGQLLV-TLGWISYS 182 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCchhHH
Confidence 46677788889999999988 888888888885 45677888899999999999999998854 5788765
Q ss_pred --hhhhHHHHHHHHHH
Q 029822 112 --FGIPAAIMLLSALC 125 (187)
Q Consensus 112 --F~i~~v~~~val~~ 125 (187)
+.|+...+.+++++
T Consensus 183 ~Ln~Isl~s~~~a~~~ 198 (511)
T TIGR00806 183 TLNIISLVFMTFSVFL 198 (511)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 34566667777765
No 162
>TIGR00898 2A0119 cation transport protein.
Probab=86.37 E-value=1.3 Score=39.63 Aligned_cols=68 Identities=10% Similarity=0.037 Sum_probs=45.9
Q ss_pred hcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHH
Q 029822 46 LGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSAL 124 (187)
Q Consensus 46 vG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~ 124 (187)
++.++.-+....+.+|.|.. +.|.....+......+|+++++.+.. +. ..++...|.+.++..+++.+
T Consensus 422 ~~~~~~~~~~~~~~~e~~p~---------~~r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~~~~~~~~~~~~ 489 (505)
T TIGR00898 422 FGITSAFQMVYLYTAELYPT---------VVRNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLVLFGGLALLAGI 489 (505)
T ss_pred HHHHHHHHHHHHHhcccccH---------HHHhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHHHHHHHHHHHHH
Confidence 44444446666677777763 45677889999999999999988877 43 34566666666665544443
No 163
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=86.04 E-value=1.4 Score=40.36 Aligned_cols=90 Identities=14% Similarity=0.151 Sum_probs=61.5
Q ss_pred hhHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhhee-------
Q 029822 32 SQLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQD------- 104 (187)
Q Consensus 32 ~~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~------- 104 (187)
.+...+..+..++++|++.+.|...++..+.-++ +.+......|+++.-+|++++..+......
T Consensus 380 vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~---------~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~ 450 (500)
T PRK09584 380 VSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQ---------RLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDP 450 (500)
T ss_pred cCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 4455677778889999999999999998887443 567888888888888888887666543321
Q ss_pred ---ccCcceehhhhHHHHHHHHHHHHhcC
Q 029822 105 ---NLGWKVGFGIPAAIMLLSALCFFLAS 130 (187)
Q Consensus 105 ---~~gw~~gF~i~~v~~~val~~f~~g~ 130 (187)
..++...|..-++..++..+++++-.
T Consensus 451 ~~~~~~~~~~f~~~~~~~~~~a~~~~~~~ 479 (500)
T PRK09584 451 LMSLEVYGRVFLQIGIATAVIAVLMLLTA 479 (500)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12366777776665444343444333
No 164
>PRK10091 MFS transport protein AraJ; Provisional
Probab=85.70 E-value=2.4 Score=36.61 Aligned_cols=41 Identities=7% Similarity=-0.033 Sum_probs=31.9
Q ss_pred HHHhhHhHHHHhhhhhhhee-ccCcceehhhhHHHHHHHHHH
Q 029822 85 YVSVSASSMVAVTLIVYIQD-NLGWKVGFGIPAAIMLLSALC 125 (187)
Q Consensus 85 Y~~invG~li~~~~~~~i~~-~~gw~~gF~i~~v~~~val~~ 125 (187)
....++|..+++.+.+++-| +.||+..|.+.++...+++..
T Consensus 330 ~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 371 (382)
T PRK10091 330 QIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSS 371 (382)
T ss_pred HHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHH
Confidence 45678999999999988877 478999999988765555444
No 165
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=85.25 E-value=1.3 Score=44.22 Aligned_cols=76 Identities=9% Similarity=-0.079 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhhee-ccCcceeh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQD-NLGWKVGF 112 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~-~~gw~~gF 112 (187)
.+.+++++.++++|.|..-+...++..+..+++ .+.+.+..+.+..++|..++..+...+.+ ..++...|
T Consensus 334 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~---------~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~ 404 (1140)
T PRK06814 334 GWRILIDLFGLAAAGGLYIVPLFAALQAWANPA---------HRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWII 404 (1140)
T ss_pred cHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcc---------cceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHH
Confidence 355667778888999988888888888877653 34556677777788888888877777763 45666666
Q ss_pred hhhHHH
Q 029822 113 GIPAAI 118 (187)
Q Consensus 113 ~i~~v~ 118 (187)
.+.++.
T Consensus 405 ~~~~~~ 410 (1140)
T PRK06814 405 LFIALA 410 (1140)
T ss_pred HHHHHH
Confidence 655544
No 166
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=84.70 E-value=2.2 Score=38.74 Aligned_cols=85 Identities=15% Similarity=0.121 Sum_probs=60.4
Q ss_pred HHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccC---cceehh
Q 029822 37 LYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLG---WKVGFG 113 (187)
Q Consensus 37 ~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~g---w~~gF~ 113 (187)
+++.=.++++|.|.+-.. .+....-|.++ ++.....++= ..|+|..+...+.|.+....| |+..-.
T Consensus 108 ll~~gll~G~~GasFav~-m~~~s~~fP~~---------~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~ 176 (417)
T COG2223 108 LLVIGLLLGLAGASFAVG-MPNASFFFPKE---------KQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAG 176 (417)
T ss_pred HHHHHHHHhcccceehcc-cccccccCChh---------hhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 333333455555555433 34556667653 3455555655 899999999999999999999 999999
Q ss_pred hhHHHHHHHHHHHHhcCCc
Q 029822 114 IPAAIMLLSALCFFLASPF 132 (187)
Q Consensus 114 i~~v~~~val~~f~~g~~~ 132 (187)
+..+.++++.+.+++..+-
T Consensus 177 i~~~~l~v~~v~~~~~~~d 195 (417)
T COG2223 177 IYVVALAIAAVLAWLGMND 195 (417)
T ss_pred HHHHHHHHHHHHHHHHhCC
Confidence 9999999988887776544
No 167
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=84.51 E-value=2.1 Score=42.33 Aligned_cols=76 Identities=13% Similarity=0.046 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhhee-ccCcceeh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQD-NLGWKVGF 112 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~-~~gw~~gF 112 (187)
...+.+.+.+++++.|..-+...++..+..++ +.+.+.+.++++..++|.+++..+...+.. .+++...|
T Consensus 322 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~---------~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~ 392 (1146)
T PRK08633 322 LASVLVLFFLFGFSAGLFIVPLNALIQFRAPE---------KELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLF 392 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCc---------cchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHH
Confidence 34455666777888888888888887777654 245677888888888888766655544432 23444455
Q ss_pred hhhHHH
Q 029822 113 GIPAAI 118 (187)
Q Consensus 113 ~i~~v~ 118 (187)
.+.++.
T Consensus 393 ~~~~~~ 398 (1146)
T PRK08633 393 YLIALV 398 (1146)
T ss_pred HHHHHH
Confidence 554443
No 168
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=83.98 E-value=9.4 Score=34.59 Aligned_cols=96 Identities=21% Similarity=0.187 Sum_probs=62.6
Q ss_pred chhHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccC---
Q 029822 31 GSQLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLG--- 107 (187)
Q Consensus 31 ~~~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~g--- 107 (187)
........++..++++|.+.-.....++.+|.-+++ +|.+.-..-|...-+|..++.++...+-+.++
T Consensus 86 ~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~---------~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~r 156 (403)
T PF03209_consen 86 WLGLALAALAFLLYGLGVHASGTSFLALLADLAPEE---------RRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPER 156 (403)
T ss_pred HHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHh---------hhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHH
Confidence 344556666667777888878888888999987753 44555566666667888888887777666554
Q ss_pred -cceehhhhHHHHHHHHHHHHhcCCceee
Q 029822 108 -WKVGFGIPAAIMLLSALCFFLASPFYVK 135 (187)
Q Consensus 108 -w~~gF~i~~v~~~val~~f~~g~~~y~~ 135 (187)
++..-.++.+.+.+.++..+-.++++..
T Consensus 157 L~~v~~~~a~i~~~l~~ia~wg~E~r~~~ 185 (403)
T PF03209_consen 157 LIQVIQGVALIALLLNLIALWGQEPRRSR 185 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCcc
Confidence 2333444445555666655656666544
No 169
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=83.77 E-value=4.5 Score=36.51 Aligned_cols=59 Identities=19% Similarity=0.108 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHHHHHhcCCceee
Q 029822 77 LKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALCFFLASPFYVK 135 (187)
Q Consensus 77 ~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~f~~g~~~y~~ 135 (187)
.+..-+++--+.|+|..+|..+...+-|++||.....++++.++++++..+...+.+++
T Consensus 333 ~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~~~~ 391 (394)
T COG2814 333 ADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSARKDRR 391 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 34555666567777777777777777788999999999999999998887776665544
No 170
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=83.48 E-value=1.5 Score=40.60 Aligned_cols=79 Identities=15% Similarity=0.199 Sum_probs=61.9
Q ss_pred HHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccC-cceehhhhHHHHHH
Q 029822 43 LMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLG-WKVGFGIPAAIMLL 121 (187)
Q Consensus 43 liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~g-w~~gF~i~~v~~~v 121 (187)
+.++..|.+-...+....|.... ++..+.|.+..+...++.++++-+..++.|..| |...|..+.+.+++
T Consensus 397 ~fG~~~g~~~~l~~~i~~~~~g~---------~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~ 467 (509)
T KOG2504|consen 397 LFGFCVGSFSSLTPVILVDLVGL---------EKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLL 467 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCh---------hhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHH
Confidence 34455566666666666677664 467888999999999999999999999998877 99999999999988
Q ss_pred HHHHHHhcC
Q 029822 122 SALCFFLAS 130 (187)
Q Consensus 122 al~~f~~g~ 130 (187)
+...++.-.
T Consensus 468 s~~~~~~~~ 476 (509)
T KOG2504|consen 468 SAVLLLILR 476 (509)
T ss_pred HHHHHHHhH
Confidence 886654443
No 171
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=83.09 E-value=2.6 Score=36.71 Aligned_cols=45 Identities=13% Similarity=0.152 Sum_probs=33.9
Q ss_pred HHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHHHH
Q 029822 82 SWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALCF 126 (187)
Q Consensus 82 ~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~f 126 (187)
.++....++|..++..+.+++.|..||+..|.+.++..++++++.
T Consensus 342 ~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 342 ALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 444444567777666678899999999999999988777766654
No 172
>PRK15075 citrate-proton symporter; Provisional
Probab=82.93 E-value=1.9 Score=38.15 Aligned_cols=60 Identities=15% Similarity=0.039 Sum_probs=38.9
Q ss_pred HHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhH-hHHHHhhhhhhheeccCcc
Q 029822 41 FGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSA-SSMVAVTLIVYIQDNLGWK 109 (187)
Q Consensus 41 L~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~inv-G~li~~~~~~~i~~~~gw~ 109 (187)
+++++++.|...+...+...|.++++ .+...+.+.|...+. ++.+++.+.+++.++.|+.
T Consensus 338 ~~~~~~~~g~~~~~~~~~~~e~~p~~---------~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 338 ELWLSFLYGSYNGAMVVALTEVMPAE---------VRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCC---------ccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 34445566666666667777777643 345566666554443 4667888889998888753
No 173
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=82.47 E-value=3.1 Score=35.92 Aligned_cols=79 Identities=18% Similarity=0.128 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHH-HHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYY-VSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y-~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
.+.+++...+.+++.|..-+.......++ + + .++.....++. +..++|..+++.+.+++.|.+|+. .|
T Consensus 293 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~---~------~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~~-~~ 361 (382)
T PRK11128 293 LPWLIVIQILHCGTFTVCHLAAMRYIAAR-P---G------SEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGAG-VF 361 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-C---H------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HH
Confidence 44556666677777777666655554443 2 1 22345566664 456778788999999999998874 55
Q ss_pred hhhHHHHHHHH
Q 029822 113 GIPAAIMLLSA 123 (187)
Q Consensus 113 ~i~~v~~~val 123 (187)
.+.++..++++
T Consensus 362 ~~~~~~~~~~~ 372 (382)
T PRK11128 362 WVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHH
Confidence 55554444443
No 174
>PRK12307 putative sialic acid transporter; Provisional
Probab=82.16 E-value=3.5 Score=35.83 Aligned_cols=51 Identities=8% Similarity=-0.021 Sum_probs=38.8
Q ss_pred ccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCccee
Q 029822 52 RSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVG 111 (187)
Q Consensus 52 kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~g 111 (187)
-+....+..|.+++ +.+.+.....+...++|+.+++.+.+++.+..|+..+
T Consensus 339 ~~~~~~~~~~~~p~---------~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~ 389 (426)
T PRK12307 339 GGLVPKFLYDYFPL---------EVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAA 389 (426)
T ss_pred hHHHHHHHHHhCcH---------HHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHH
Confidence 34455566666653 3567788888899999999999999999998886554
No 175
>TIGR00895 2A0115 benzoate transport.
Probab=82.04 E-value=2.2 Score=35.99 Aligned_cols=59 Identities=17% Similarity=0.095 Sum_probs=46.8
Q ss_pred HHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhh
Q 029822 35 MLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYI 102 (187)
Q Consensus 35 ~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i 102 (187)
..+++...+.+++.|+..+...+...|.+++ +.+...+.+++...++|..+++.+.+++
T Consensus 339 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---------~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 339 TLLLLLGAIAGFFVNGGQSGLYALMALFYPT---------AIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCH---------HHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 4455666677888888888888888888763 4567889999999999999998887654
No 176
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=81.94 E-value=4 Score=34.49 Aligned_cols=71 Identities=13% Similarity=0.237 Sum_probs=39.8
Q ss_pred HHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhH-hHHHHhhhhhhheeccCcceehhh
Q 029822 36 LLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSA-SSMVAVTLIVYIQDNLGWKVGFGI 114 (187)
Q Consensus 36 ~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~inv-G~li~~~~~~~i~~~~gw~~gF~i 114 (187)
.++....+.++|.+..-+.......|.+++ ++.+....+....+. |++.++. .+.+.++.+|...|..
T Consensus 302 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----------~~g~~~~~~~~~~~~~g~i~~~~-~~~~~~~~~~~~~~~~ 370 (385)
T TIGR00710 302 MIIGPMMFVGIGNSMISSIAMAYALEDFPH----------VAGTASALFGTLRLVLGAIVGYL-VSLIHGNTAWPMSLSC 370 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCcc----------cchHHHHHHHHHHHHHHHHHHHH-HHhccccChHHHHHHH
Confidence 444455567788888888777766665532 234455555554443 4544444 4566666566555544
Q ss_pred hHH
Q 029822 115 PAA 117 (187)
Q Consensus 115 ~~v 117 (187)
...
T Consensus 371 ~~~ 373 (385)
T TIGR00710 371 LVL 373 (385)
T ss_pred HHH
Confidence 433
No 177
>PRK10504 putative transporter; Provisional
Probab=81.11 E-value=2.8 Score=37.19 Aligned_cols=62 Identities=16% Similarity=0.028 Sum_probs=43.3
Q ss_pred HHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCc
Q 029822 38 YLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGW 108 (187)
Q Consensus 38 ~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw 108 (187)
.+.+.+.++|.|..-+....+..+..++ +.+...+.++.+..++|..+++.+...+-+..|+
T Consensus 357 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~---------~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 357 PFVLFLQGMVNSTRFSSMNTLTLKDLPD---------NLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCH---------HhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3445556677777777777777776653 3456678888889999988888887776555444
No 178
>PTZ00207 hypothetical protein; Provisional
Probab=78.72 E-value=3.7 Score=38.89 Aligned_cols=82 Identities=13% Similarity=0.114 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHH-HhhhhhhheeccCccee
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMV-AVTLIVYIQDNLGWKVG 111 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li-~~~~~~~i~~~~gw~~g 111 (187)
..+.+++...+.++|.|.+-+.......+.|. ++|.....+...+.++|+.+ +++...++.+ +|+..
T Consensus 119 s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp----------~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~--~~~~~ 186 (591)
T PTZ00207 119 SVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP----------SNRGAVVAIMKTFTGLGSAILGSIQLAFFSD--NTSAY 186 (591)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh----------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hHHHH
Confidence 46677778888899998888877888888886 24567888888899999964 6666666664 45555
Q ss_pred hhhhHHH-HHHHHHHH
Q 029822 112 FGIPAAI-MLLSALCF 126 (187)
Q Consensus 112 F~i~~v~-~~val~~f 126 (187)
|.+.++. .+++++.+
T Consensus 187 fl~l~vl~~vv~ll~~ 202 (591)
T PTZ00207 187 FFFLMSFALVVGILAI 202 (591)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5555543 44444443
No 179
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=78.51 E-value=3.8 Score=35.84 Aligned_cols=67 Identities=7% Similarity=-0.099 Sum_probs=46.8
Q ss_pred ccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHHH
Q 029822 48 GGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALC 125 (187)
Q Consensus 48 ~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~ 125 (187)
.++.-+...++.+|.|++ +.+.+...+.+...++|+.+++.+.+.+.. |....|.+-++..+++.+.
T Consensus 294 ~~~~~~~~~~~~~~~~p~---------~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~ 360 (368)
T TIGR00903 294 MLPAYAIIMDWIGKFCDK---------ELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAI 360 (368)
T ss_pred hhhhHHHHHHHHHHhcch---------hhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHH
Confidence 334445566778888864 356788999999999999889888877663 5555666666555554444
No 180
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=78.30 E-value=2.2 Score=37.80 Aligned_cols=73 Identities=12% Similarity=0.048 Sum_probs=53.4
Q ss_pred HHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheecc------Cccee
Q 029822 38 YLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNL------GWKVG 111 (187)
Q Consensus 38 ~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~------gw~~g 111 (187)
...+.++++..+++-|.+.+++.+.+.++. ...-...-+++ +|+.+.+.+..++.|+. |.+.+
T Consensus 325 ~~~l~~~glf~s~~fp~i~sl~~~~~g~~~----------~~~s~~l~~~~-~Gga~~p~l~G~~~d~~~~~~~~~~~~~ 393 (410)
T TIGR00885 325 LYCLTLCSAFMSLMFPTIYGIALKGLGQDT----------KYGAAGLVMAI-IGGGIVPPLQGFIIDMKEIAAAPAVNTS 393 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhh----------hhhHHHHHHHH-hccchHHHHHHHHHHHhcccccCccchH
Confidence 345556667777777999999999987432 22223344455 99999999999999964 58899
Q ss_pred hhhhHHHHHH
Q 029822 112 FGIPAAIMLL 121 (187)
Q Consensus 112 F~i~~v~~~v 121 (187)
|.++.++...
T Consensus 394 ~~~~~~~~~~ 403 (410)
T TIGR00885 394 FILPLLCFAV 403 (410)
T ss_pred HHHHHHHHHH
Confidence 9999988644
No 181
>PRK09848 glucuronide transporter; Provisional
Probab=78.21 E-value=8.9 Score=33.91 Aligned_cols=60 Identities=7% Similarity=-0.011 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHH-----HhhHhHHHHhhhhhh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYV-----SVSASSMVAVTLIVY 101 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~-----~invG~li~~~~~~~ 101 (187)
...+++...+..++.+.+.+...++..+.-++.+ +|..+..+-.+ ..++|..+++.+.+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~--------~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~ 173 (448)
T PRK09848 109 VVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQ--------SRARLGAARGIAASLTFVCLAFLIGPSIKNS 173 (448)
T ss_pred HHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444555566777888888777777666555322 23344444333 345555555555443
No 182
>PRK11043 putative transporter; Provisional
Probab=78.01 E-value=6.8 Score=33.81 Aligned_cols=67 Identities=15% Similarity=0.098 Sum_probs=41.7
Q ss_pred HHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 36 LLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 36 ~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
.+.+++.+++++.|..-|.......+++++ .+.+...++....+.++.++..+.+.+-+......++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 364 (401)
T PRK11043 298 PLLIPFCVMAAANGAIYPIVVAQALRPFPQ----------ATGKAAALQNTLQLGLCFLASLLVSALISTPLLTTGS 364 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhCcc----------cChHHHHHHHHHHHHHHHHHHHHHHHccCCChhHHHH
Confidence 344556667788888888877776666542 2345666666655666667777777665543333333
No 183
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=77.52 E-value=7.1 Score=34.10 Aligned_cols=79 Identities=14% Similarity=0.007 Sum_probs=52.3
Q ss_pred HHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHH
Q 029822 38 YLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAA 117 (187)
Q Consensus 38 ~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v 117 (187)
.+.+.+.++|.|.+.+...+...+. .+++ ..+.+.+...++..|+|..++..+...+ +..|=+..+.+.++
T Consensus 297 ~~~~~~~G~~~g~~~~~~~~~~q~~-~~~~-------~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 367 (393)
T PRK11195 297 YPLLILIGALGGFFVVPMNALLQHR-GHVL-------VGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGF 367 (393)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHHhh-Cccc-------ccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHH
Confidence 3445566778788777777765432 1111 1256677788889999999888777655 56777777777777
Q ss_pred HHHHHHHH
Q 029822 118 IMLLSALC 125 (187)
Q Consensus 118 ~~~val~~ 125 (187)
+.++.+.+
T Consensus 368 ~~~~~~~~ 375 (393)
T PRK11195 368 GLLVALAM 375 (393)
T ss_pred HHHHHHHH
Confidence 65555544
No 184
>PRK10133 L-fucose transporter; Provisional
Probab=76.49 E-value=2.8 Score=37.48 Aligned_cols=76 Identities=14% Similarity=0.172 Sum_probs=52.8
Q ss_pred HHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccC-cceehhhhH
Q 029822 38 YLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLG-WKVGFGIPA 116 (187)
Q Consensus 38 ~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~g-w~~gF~i~~ 116 (187)
+.++.++++|.|.+-|+..+...+.+.++.. .-..... +.. +|+.+++.+..++.|.+| -+.+|+++.
T Consensus 351 ~~~~~l~glg~~~i~P~~~s~a~~~~~~~~~-------~as~l~~---~~~-~g~~~~~~i~G~l~~~~g~~~~~~~v~~ 419 (438)
T PRK10133 351 LIALTLCSAFMSIQYPTIFSLGIKNLGQDTK-------YGSSFIV---MTI-IGGGIVTPVMGFVSDAAGNIPTAELIPA 419 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccchhhc-------cchhHHh---HHh-ccchHHHHHHHHHHHhccchHHHHHHHH
Confidence 3466778999999999999999999875321 1122222 222 366667777888888887 788998888
Q ss_pred HHHHHHHH
Q 029822 117 AIMLLSAL 124 (187)
Q Consensus 117 v~~~val~ 124 (187)
++.++.++
T Consensus 420 ~~~~~~~~ 427 (438)
T PRK10133 420 LCFAVIFI 427 (438)
T ss_pred HHHHHHHH
Confidence 76544443
No 185
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=74.59 E-value=4.9 Score=36.73 Aligned_cols=92 Identities=16% Similarity=0.179 Sum_probs=60.1
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhhee--------
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQD-------- 104 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~-------- 104 (187)
..+.+.....+.++|++...|...++..+.-++ +.+......+++..++|+.++..+..+...
T Consensus 378 s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~---------~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~ 448 (489)
T PRK10207 378 SPWFIVLVYLFQSLGELFISALGLAMIAALVPQ---------HLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPL 448 (489)
T ss_pred CHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccch
Confidence 445566777889999999999988888777553 355667777888889999988776644421
Q ss_pred --ccCcceehhhhHHHHHHHHHHHHhcCCce
Q 029822 105 --NLGWKVGFGIPAAIMLLSALCFFLASPFY 133 (187)
Q Consensus 105 --~~gw~~gF~i~~v~~~val~~f~~g~~~y 133 (187)
.-.+..-|..-++.+++..+++++..+++
T Consensus 449 ~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~ 479 (489)
T PRK10207 449 ETLPVYTNVFGKIGLVTLGVAVVMALMVPWL 479 (489)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11245556666655555444444433433
No 186
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=74.09 E-value=21 Score=33.03 Aligned_cols=84 Identities=21% Similarity=0.258 Sum_probs=49.2
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhhee-------c
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQD-------N 105 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~-------~ 105 (187)
+....++--++..++.-.+.-.-.++++..-+ |+ ++|.+-.+|-.+..++|.++..++.+.+.. .
T Consensus 111 k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~--d~------~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~ 182 (467)
T COG2211 111 KLIYALVTYMLLGLGYTLVNIPYGALGPEITQ--DP------QERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKA 182 (467)
T ss_pred chHHHHHHHHHHHHHHHheeCchhhcchhhcC--CH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcch
Confidence 33444444445556666665555566666655 33 456778889888999998888777655533 2
Q ss_pred cCcceehhhhHHHHHHHHH
Q 029822 106 LGWKVGFGIPAAIMLLSAL 124 (187)
Q Consensus 106 ~gw~~gF~i~~v~~~val~ 124 (187)
.||+..-.+-++...++++
T Consensus 183 ~g~~~~~~~~~vi~~i~~l 201 (467)
T COG2211 183 LGYQGTALVLGVIGVILLL 201 (467)
T ss_pred hhHHHHHHHHHHHHHHHHH
Confidence 3555544444443333333
No 187
>PTZ00207 hypothetical protein; Provisional
Probab=73.88 E-value=5.4 Score=37.84 Aligned_cols=81 Identities=9% Similarity=0.093 Sum_probs=62.4
Q ss_pred HHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHH-hhhhhhhee---------
Q 029822 35 MLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVA-VTLIVYIQD--------- 104 (187)
Q Consensus 35 ~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~-~~~~~~i~~--------- 104 (187)
..+|++-+++++++|...+...+...+.|. .+. ...||.-+.+.-+|+++= ..+.+++=|
T Consensus 453 ~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~---------g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~ 522 (591)
T PTZ00207 453 AALPLPYFIAAFANGFMAATIALVTRTIFA-KDP---------AKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQD 522 (591)
T ss_pred cHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cch---------HHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 578899999999999999999999999999 443 447888888999998874 344444411
Q ss_pred ----ccCcceehhhhHHHHHHHHHH
Q 029822 105 ----NLGWKVGFGIPAAIMLLSALC 125 (187)
Q Consensus 105 ----~~gw~~gF~i~~v~~~val~~ 125 (187)
..+++..|++.++..+++.+.
T Consensus 523 ~C~G~~C~~~~~~v~~~~~~~g~~~ 547 (591)
T PTZ00207 523 VCTERVCVVMPLAFLLGLSFLAFIT 547 (591)
T ss_pred eeCCceeeHhHHHHHHHHHHHHHHH
Confidence 147999998887766666655
No 188
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=73.46 E-value=12 Score=33.44 Aligned_cols=121 Identities=16% Similarity=0.087 Sum_probs=69.5
Q ss_pred chhHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhh-HhHHHHhhhhhhheeccCc-
Q 029822 31 GSQLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVS-ASSMVAVTLIVYIQDNLGW- 108 (187)
Q Consensus 31 ~~~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~in-vG~li~~~~~~~i~~~~gw- 108 (187)
......+++|-++-++++...-.+--+-..-+.++.+-.+ +.+...|..--+..| +-+.++..+.-++.+..|.
T Consensus 118 ~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~----~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g 193 (354)
T PF05631_consen 118 SSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQ----EWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFG 193 (354)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh----HHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCC
Confidence 3457888889899888888877655544444444443211 345555555443334 4455566666666676655
Q ss_pred -ceehhhhHHHHHHHHHHHHhcCCceeecCCCCChhHHHHHHHHHHHH
Q 029822 109 -KVGFGIPAAIMLLSALCFFLASPFYVKSKANTSLLSGLIQVLVASYK 155 (187)
Q Consensus 109 -~~gF~i~~v~~~val~~f~~g~~~y~~~~p~gs~l~~~~~v~~~a~~ 155 (187)
...|..+.++..++.++.....+.-...+.+.+++.+.++--..+++
T Consensus 194 ~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~~~a~~~i~ 241 (354)
T PF05631_consen 194 PVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGSFREAWRAIL 241 (354)
T ss_pred CcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHHHHHHHHHHH
Confidence 67799999888777766544433322222334444444443344443
No 189
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=72.80 E-value=7 Score=34.46 Aligned_cols=65 Identities=14% Similarity=-0.020 Sum_probs=39.1
Q ss_pred cchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhH--hHHHHhhhhhhheeccCcceehhhhHHHHHHHHHHHH
Q 029822 53 SSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSA--SSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALCFF 127 (187)
Q Consensus 53 p~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~inv--G~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~f~ 127 (187)
+...+..+|.|.. +.|.....+.|...|+ |. +++.+..++...-.|...|.+.++..+++++..+
T Consensus 355 ~~~~~~~~e~fp~---------~~r~t~~g~~~~~g~~~~g~-~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~ 421 (432)
T PRK10406 355 SISGILKAEMFPA---------QVRALGVGLSYAVANALFGG-SAEYVALSLKSIGMETAFFWYVTLMAVVAFLVSL 421 (432)
T ss_pred HHHHHHHHHHCCC---------CccchhhhHHHHHHHHHHHh-HHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHH
Confidence 3455667888874 3467788888876564 44 3666666665433355566666555555555433
No 190
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=71.08 E-value=6.9 Score=33.17 Aligned_cols=59 Identities=12% Similarity=0.066 Sum_probs=42.4
Q ss_pred HHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccC
Q 029822 41 FGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLG 107 (187)
Q Consensus 41 L~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~g 107 (187)
..+.++|.|..-|...+...+...+. ++....+...+...++|..+++.+.+++.|+.|
T Consensus 292 ~~l~g~~~g~~~~~~~~~~~~~~~~~--------~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 292 ALVLGLGQGGAFPLALTLIGLRSRQA--------AQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHhhhhHhHHHHHHHHHhccCH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45678888888888777666654431 234556666677788888899999999988765
No 191
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=70.90 E-value=5.9 Score=32.79 Aligned_cols=55 Identities=15% Similarity=0.126 Sum_probs=45.2
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHh
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAV 96 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~ 96 (187)
+....++.+.++++|.|...+...++..+.+++ +.+.+.+..+....++|..+++
T Consensus 298 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---------~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 298 SPVWLIIALFLIGFGFGIVFPILFSLIQELVPP---------EYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHT---------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH---------HHHHHHHHHHHHHHHHHHHHCC
Confidence 345666678889999999999999999998864 3567888999999999998875
No 192
>PF14007 YtpI: YtpI-like protein
Probab=70.58 E-value=4 Score=29.20 Aligned_cols=51 Identities=14% Similarity=0.162 Sum_probs=37.3
Q ss_pred HhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHHHHHhcCCceeecCC
Q 029822 87 SVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALCFFLASPFYVKSKA 138 (187)
Q Consensus 87 ~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~f~~g~~~y~~~~p 138 (187)
.+.+|.++....+-..-- .+=...+.++++.+++++...+.|.+.|++-.|
T Consensus 36 ~ialG~fl~~fgiNQ~~~-~~st~~~iV~~ifl~lG~~n~~~G~r~y~hy~p 86 (89)
T PF14007_consen 36 NIALGIFLILFGINQMFL-FGSTVRLIVGAIFLVLGLFNLFAGIRAYRHYRP 86 (89)
T ss_pred HHHHHHHHHHHHHHHHHH-cccHHHHHHHHHHHHHhHHHHHHHHHHHHhhhh
Confidence 577888877665544333 333478889999999999999999888766444
No 193
>PRK11462 putative transporter; Provisional
Probab=69.58 E-value=11 Score=33.97 Aligned_cols=69 Identities=7% Similarity=0.057 Sum_probs=40.4
Q ss_pred HHHHHHHHhhcccccccchhhhhhhccCCCCCc-ccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCc
Q 029822 37 LYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGI-KSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGW 108 (187)
Q Consensus 37 ~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~-~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw 108 (187)
+++...+.++|.++.-+...++.+|--|.++-+ ++ ++...+|+-+-++.++|..++..+.+++-+..||
T Consensus 321 ~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~---r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 321 MFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGK---RLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCC---CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 344445556666666666677888877644311 11 2334446666667778877777666665444444
No 194
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=66.46 E-value=9.9 Score=35.24 Aligned_cols=81 Identities=25% Similarity=0.301 Sum_probs=55.0
Q ss_pred HHHHHHHHHH-HhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceeh
Q 029822 34 LMLLYLAFGL-MSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGF 112 (187)
Q Consensus 34 ~~~~~~aL~l-iavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF 112 (187)
.+.+|+...+ .++|.|.+.......++..|++ +|...-..--.+-.+|.++=+.+.-++-+++||+.++
T Consensus 134 i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~k----------kR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~ 203 (509)
T KOG2504|consen 134 LWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEK----------KRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGAL 203 (509)
T ss_pred HHHHHHHHHHHhhccchhhhcchhhhhhhHhHH----------HHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHH
Confidence 4445555443 5688998888878888877773 3333333333467777777777778888899999998
Q ss_pred hhhHHHHHHHHH
Q 029822 113 GIPAAIMLLSAL 124 (187)
Q Consensus 113 ~i~~v~~~val~ 124 (187)
++-...++-..+
T Consensus 204 l~~~~~~l~~~~ 215 (509)
T KOG2504|consen 204 LIFGGISLNVLV 215 (509)
T ss_pred HHHHHHHHHHHH
Confidence 887776543333
No 195
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=65.82 E-value=0.34 Score=42.60 Aligned_cols=81 Identities=20% Similarity=0.205 Sum_probs=58.4
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhhe---eccCcc
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQ---DNLGWK 109 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~---~~~gw~ 109 (187)
....+.++..+.++|.|+.-+....+..+.-.+ +.|..+..++..+.++|.+++......+. ++.+|+
T Consensus 101 ~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~---------~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr 171 (451)
T PF00083_consen 101 NFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPP---------KHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWR 171 (451)
T ss_pred ccccccccccccccccccccccccccccccccc---------cccccccccccccccccccccccccccccccccccccc
Confidence 567888889999999999999988877766542 34455666666777888887766544443 345699
Q ss_pred eehhhhHHHHHHH
Q 029822 110 VGFGIPAAIMLLS 122 (187)
Q Consensus 110 ~gF~i~~v~~~va 122 (187)
..+.++++..++.
T Consensus 172 ~~~~~~~~~~l~~ 184 (451)
T PF00083_consen 172 ILLIFGAIPSLLV 184 (451)
T ss_pred ccccccccccccc
Confidence 9999888755433
No 196
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=65.54 E-value=28 Score=32.11 Aligned_cols=38 Identities=11% Similarity=0.269 Sum_probs=30.3
Q ss_pred hhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhhe
Q 029822 57 AFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQ 103 (187)
Q Consensus 57 ~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~ 103 (187)
+|..|.++. ++-.++|..+..+.|+|.++|..++.++.
T Consensus 152 ~fandi~t~---------~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 152 GFANQITTI---------DEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHhcCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666664 35577999999999999999998888864
No 197
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=64.42 E-value=16 Score=32.60 Aligned_cols=81 Identities=16% Similarity=0.180 Sum_probs=50.9
Q ss_pred HHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHH-HhhHhHHHHhhhhhhheeccC------cceeh
Q 029822 40 AFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYV-SVSASSMVAVTLIVYIQDNLG------WKVGF 112 (187)
Q Consensus 40 aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~-~invG~li~~~~~~~i~~~~g------w~~gF 112 (187)
+..+=++..|.+-.....++.+..+++ .+.+.=.+|.. ..-+|..++..+.+++-|++| |...|
T Consensus 307 ~q~lhG~tf~~~~~a~~~yi~~~~p~~---------~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~ 377 (400)
T PF03825_consen 307 GQLLHGLTFGLFHAASVRYIDRIAPPE---------LRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVF 377 (400)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHhCCcc---------chHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHH
Confidence 333445556666666666666666543 23344455544 356888888888889888765 44566
Q ss_pred hhhHHHHHHHHHHHHhc
Q 029822 113 GIPAAIMLLSALCFFLA 129 (187)
Q Consensus 113 ~i~~v~~~val~~f~~g 129 (187)
.++++..++..++|++.
T Consensus 378 ~v~a~~~~~~~~~f~~~ 394 (400)
T PF03825_consen 378 LVFAVMALVILVLFVIL 394 (400)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 77777666666666654
No 198
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=64.34 E-value=8 Score=35.49 Aligned_cols=50 Identities=18% Similarity=0.337 Sum_probs=39.8
Q ss_pred HHHHHHHHHhhHhHHHHhhhhhhheec---cCcceehhhhHHHHHHHHHHHHh
Q 029822 79 SYFSWYYVSVSASSMVAVTLIVYIQDN---LGWKVGFGIPAAIMLLSALCFFL 128 (187)
Q Consensus 79 ~~F~~~Y~~invG~li~~~~~~~i~~~---~gw~~gF~i~~v~~~val~~f~~ 128 (187)
.....--+..++..++++.++.++-.+ -.|+..|++.++.++++-++|.+
T Consensus 393 ~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~ 445 (466)
T KOG2532|consen 393 FVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLF 445 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeE
Confidence 344555667888888998888888743 38999999999999998888765
No 199
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=64.09 E-value=42 Score=30.50 Aligned_cols=95 Identities=20% Similarity=0.150 Sum_probs=63.6
Q ss_pred chhHHHHHHHHHHHhhccc---ccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccC
Q 029822 31 GSQLMLLYLAFGLMSLGGG---GIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLG 107 (187)
Q Consensus 31 ~~~~~~~~~aL~liavG~G---g~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~g 107 (187)
......+..++....+|.. +.-.++..+.-+.....+.+.. ...+-.+|+--..++|++++....+.+.|.+|
T Consensus 42 ~~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~----~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~G 117 (513)
T KOG0254|consen 42 FVILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTG----EYSVRQGLLTSILNLGALVGSLLAGRLGDRIG 117 (513)
T ss_pred ehHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccc----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3445556666666777773 4444444444444443332111 11145578888899999999999999999999
Q ss_pred cceehhhhHHHHHHHHHHHHhc
Q 029822 108 WKVGFGIPAAIMLLSALCFFLA 129 (187)
Q Consensus 108 w~~gF~i~~v~~~val~~f~~g 129 (187)
.+..+.++.+...++.++....
T Consensus 118 Rk~~l~~~~~~~~iG~ii~~~a 139 (513)
T KOG0254|consen 118 RKKTLLLAVVLFLIGAIIIALA 139 (513)
T ss_pred hHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999998877776665443
No 200
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=62.62 E-value=11 Score=25.93 Aligned_cols=54 Identities=20% Similarity=0.261 Sum_probs=35.5
Q ss_pred HHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHHHHHhcCCceeec
Q 029822 80 YFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALCFFLASPFYVKS 136 (187)
Q Consensus 80 ~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~f~~g~~~y~~~ 136 (187)
...++...+-+++++|.+ .+|+.+++ +..+.+-+++.++++++.+=-.+.|++.
T Consensus 9 ae~l~~~il~~~~iisfi-~Gy~~q~~--~~~~~~~~~g~~~~~lv~vP~Wp~y~r~ 62 (76)
T PF06645_consen 9 AEKLMQYILIISAIISFI-VGYITQSF--SYTFYIYGAGVVLTLLVVVPPWPFYNRH 62 (76)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHH--HHHHHHHHHHHHHHHhheeCCcHhhcCC
Confidence 345556678888887754 57776654 5666777777777777666566666553
No 201
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=55.93 E-value=33 Score=26.43 Aligned_cols=78 Identities=21% Similarity=0.229 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHH-HhhHhHHHHhhhhhhhe--eccCcce
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYV-SVSASSMVAVTLIVYIQ--DNLGWKV 110 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~-~invG~li~~~~~~~i~--~~~gw~~ 110 (187)
...+.+...+.+++.|...+...++..+.+++ . ..+...+.++.. ...+|..+++.....+. ...+|+.
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPE-A-------TERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRA 165 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc-h-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH
Confidence 34444455557788888889999999999886 2 134445555555 46666666654443333 3468888
Q ss_pred ehhhhHHHH
Q 029822 111 GFGIPAAIM 119 (187)
Q Consensus 111 gF~i~~v~~ 119 (187)
.|.+.....
T Consensus 166 ~~~~~~~~~ 174 (338)
T COG0477 166 AFLLAALLG 174 (338)
T ss_pred HHHHHHHHH
Confidence 666665543
No 202
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=55.72 E-value=32 Score=31.82 Aligned_cols=71 Identities=14% Similarity=0.091 Sum_probs=50.5
Q ss_pred hhHHHHHHHHHHHhhcccccccchhhhhhhccCCCCC-cccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheec
Q 029822 32 SQLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDG-IKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDN 105 (187)
Q Consensus 32 ~~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~-~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~ 105 (187)
.+.+++++..++..+|.+..-+-..++.+|--|-++- .++ ++-...|+.+-+..=+|..++..+.+++-..
T Consensus 325 ~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~---R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~ 396 (467)
T COG2211 325 GSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGV---RREGIVYSGMTFFRKLGLALAGFIPGWILGA 396 (467)
T ss_pred cchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCC---CchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567788888888899999999999999988775431 112 3455667777777777777777666665443
No 203
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=55.49 E-value=26 Score=31.21 Aligned_cols=75 Identities=15% Similarity=0.134 Sum_probs=48.6
Q ss_pred HHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccC---cceehhh
Q 029822 38 YLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLG---WKVGFGI 114 (187)
Q Consensus 38 ~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~g---w~~gF~i 114 (187)
|+++.++++.....--..-|.++-...| .++...|...|-.-|+|-.+.+++.+.+.|+.| |--.|.+
T Consensus 356 y~~m~~lGLsysllAcslWP~va~~vpE---------~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl 426 (459)
T KOG4686|consen 356 YTSMTFLGLSYSLLACSLWPCVASLVPE---------EQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFL 426 (459)
T ss_pred HHHHHHHhhhHHHHHHHHhhhhhhhCCH---------HHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHH
Confidence 4455555554433322233444433332 578889999999999999999999999998755 4445665
Q ss_pred hHHHHHH
Q 029822 115 PAAIMLL 121 (187)
Q Consensus 115 ~~v~~~v 121 (187)
..+.|.+
T Consensus 427 ~~~~~aL 433 (459)
T KOG4686|consen 427 IIGLMAL 433 (459)
T ss_pred HHHHHHH
Confidence 5555443
No 204
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=54.85 E-value=14 Score=32.49 Aligned_cols=63 Identities=14% Similarity=0.086 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheec
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDN 105 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~ 105 (187)
...++..+.+.++|.|..-+.......+.+++ +.+......+.+..++|+.++..+...+-++
T Consensus 348 ~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~---------~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 348 FLAIALPQFIRGFGMGCFFMPLTTIALSGLPP---------HKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH---------HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455567778888888776666666555542 4567788888888899999988877776554
No 205
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=53.46 E-value=15 Score=33.71 Aligned_cols=78 Identities=22% Similarity=0.273 Sum_probs=60.2
Q ss_pred HHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheec-cCcceehhhhHHHHH
Q 029822 42 GLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDN-LGWKVGFGIPAAIML 120 (187)
Q Consensus 42 ~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~-~gw~~gF~i~~v~~~ 120 (187)
.++++..|+..+..-+..++...+++ -.+||..|-+..-.++++++...+.+.+. -+-|.|+..-.+.+.
T Consensus 349 ll~g~s~G~~qA~SRSy~~~lvp~~k---------~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~ 419 (438)
T COG2270 349 LLVGTSLGGAQASSRSYLARLVPKGK---------EGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLL 419 (438)
T ss_pred HHHHHhcchHHHHHHHHHHHhCCCcc---------ccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 46778889999999899888887643 36699999999999999998887776553 456777777777777
Q ss_pred HHHHHHHh
Q 029822 121 LSALCFFL 128 (187)
Q Consensus 121 val~~f~~ 128 (187)
+++++++.
T Consensus 420 iGl~~L~~ 427 (438)
T COG2270 420 IGLLLLLR 427 (438)
T ss_pred hhHhhEEe
Confidence 77765443
No 206
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=52.41 E-value=27 Score=32.23 Aligned_cols=58 Identities=16% Similarity=0.190 Sum_probs=44.2
Q ss_pred hhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHH
Q 029822 57 AFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLS 122 (187)
Q Consensus 57 ~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~va 122 (187)
....++|. |+ .++..|+..+...+|+.+++.....+.+-+..||..+-.+.-+.+++.
T Consensus 289 ~~v~~~~p--~~------~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~lit 346 (472)
T TIGR00769 289 SKLKAQYP--SP------NEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLLT 346 (472)
T ss_pred HHHHHHCC--CH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 44566664 22 467899999999999999878777789999999998876666655553
No 207
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=51.80 E-value=14 Score=33.86 Aligned_cols=92 Identities=13% Similarity=0.052 Sum_probs=55.0
Q ss_pred HHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHH
Q 029822 39 LAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAI 118 (187)
Q Consensus 39 ~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~ 118 (187)
+-...+++|.|..-..+.+..+...|....++- +.-.+-+.++=.+.++|..+|++....+.+++||.|--.+-+..
T Consensus 366 vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~---~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~ 442 (464)
T KOG3764|consen 366 VPNFGLGFGIGLADASLIPTLGYLVDPRHVSGF---NVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGIL 442 (464)
T ss_pred hhhHHHHHHHHHHHHHHhhhhHHhcchhhcccc---ceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHH
Confidence 333345566666666666666666664332111 12233344444578999999999999999999998875555554
Q ss_pred HHHHHHHHHhcCCce
Q 029822 119 MLLSALCFFLASPFY 133 (187)
Q Consensus 119 ~~val~~f~~g~~~y 133 (187)
.++..-++.+.+..|
T Consensus 443 n~iyapvl~ll~~v~ 457 (464)
T KOG3764|consen 443 NLIYAPVLLLLRIVY 457 (464)
T ss_pred HHHHHHHHHHHHHhh
Confidence 444333344444443
No 208
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=49.82 E-value=37 Score=30.72 Aligned_cols=50 Identities=18% Similarity=0.056 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHhhHhHHHHhhhhhhheeccC-----cceehhhhHHHHHHHHHH
Q 029822 76 ALKSYFSWYYVSVSASSMVAVTLIVYIQDNLG-----WKVGFGIPAAIMLLSALC 125 (187)
Q Consensus 76 ~~~~~F~~~Y~~invG~li~~~~~~~i~~~~g-----w~~gF~i~~v~~~val~~ 125 (187)
.....|..+....|+|..++.....++.+..| ++.-+....++....++.
T Consensus 384 ~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~ 438 (468)
T TIGR00788 384 CESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLP 438 (468)
T ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHH
Confidence 34678888888889999999999999988877 776666655554444443
No 209
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=49.23 E-value=18 Score=33.22 Aligned_cols=41 Identities=27% Similarity=0.407 Sum_probs=32.1
Q ss_pred hhH-hHHHHhhhhhhheeccCcceehhhhHHHHHHHHHHHHh
Q 029822 88 VSA-SSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALCFFL 128 (187)
Q Consensus 88 inv-G~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~f~~ 128 (187)
..+ |+.++....+++.|++||.-+|.+-.++.+++.+.++.
T Consensus 391 ~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~ 432 (448)
T COG2271 391 AYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLP 432 (448)
T ss_pred HHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHH
Confidence 444 88888889999999999999998887776666665433
No 210
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=49.18 E-value=57 Score=28.66 Aligned_cols=28 Identities=21% Similarity=0.140 Sum_probs=20.4
Q ss_pred HHHHHHHHhhcccccccchhhhhhhccC
Q 029822 37 LYLAFGLMSLGGGGIRSSSLAFGAEQLE 64 (187)
Q Consensus 37 ~~~aL~liavG~Gg~kp~~~~~~adqf~ 64 (187)
+++++.+.++|.|..-|++....-.|..
T Consensus 315 ~~~~~~l~~~G~~~~~p~~~~~al~~~~ 342 (413)
T PRK15403 315 SVLGTSLYAFGIGLIFPTLFRFTLFSNN 342 (413)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHhccCC
Confidence 5667778889999998988864444444
No 211
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=49.05 E-value=24 Score=33.07 Aligned_cols=51 Identities=12% Similarity=0.208 Sum_probs=43.0
Q ss_pred HHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHHHHHhcCCcee
Q 029822 82 SWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALCFFLASPFYV 134 (187)
Q Consensus 82 ~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~f~~g~~~y~ 134 (187)
.--+.+-|+|.++|++...|+.|.+|-.-.|+...+.|+++.+ ..+-+...
T Consensus 87 ~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~--~~~~s~~~ 137 (538)
T KOG0252|consen 87 ALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSA--LSGLSVGT 137 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHH--HhccCCCC
Confidence 3456789999999999999999999999999999999999887 55555543
No 212
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=45.70 E-value=40 Score=31.56 Aligned_cols=68 Identities=22% Similarity=0.233 Sum_probs=53.9
Q ss_pred hhHHHHHHHHHHHHHhhHhHHHHhhhhhhhee-----ccCcceehhhhHHHHHHHHHHHHhcCCceeecCCCCChhHHH
Q 029822 73 SESALKSYFSWYYVSVSASSMVAVTLIVYIQD-----NLGWKVGFGIPAAIMLLSALCFFLASPFYVKSKANTSLLSGL 146 (187)
Q Consensus 73 ~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~-----~~gw~~gF~i~~v~~~val~~f~~g~~~y~~~~p~gs~l~~~ 146 (187)
|.+-|..+..+.=.+.-+|+.++.+..-++++ +.|.+..|.+.+.+|+++++. .|-.++..|+-+.++
T Consensus 436 ParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~------T~l~pEtk~~~leei 508 (538)
T KOG0252|consen 436 PARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILF------TLLIPETKGKSLEEI 508 (538)
T ss_pred hHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHhe------eEEeecccccCHHHh
Confidence 44667777777777899999999999999999 889999999999999988876 333446666666554
No 213
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=43.20 E-value=1.8e+02 Score=26.95 Aligned_cols=112 Identities=18% Similarity=0.243 Sum_probs=56.4
Q ss_pred HHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCccee-hhhh
Q 029822 37 LYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVG-FGIP 115 (187)
Q Consensus 37 ~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~g-F~i~ 115 (187)
+.+=-+++++|.|| -|-..++=++-...... -...-.+.||-.+--...+++-.+. .+.||++- |.+.
T Consensus 169 L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r------~~~~V~~~~waig~v~ea~law~vm----~~~gwr~~l~~~~ 237 (528)
T KOG0253|consen 169 LCVFRALWGFGVGG-LPVDSAIYLEFLPSSHR------WLLTVMSFFWAIGQVFEALLAWGVM----SNFGWRYLLFTSS 237 (528)
T ss_pred hhHHHHHHhccCCC-ccHhHHHHHHhccCcCC------CcchhHHHHHHHHHHHHHHHHHHHH----HhhhHHHHHHHHH
Confidence 33334568888888 66666655554443221 1222223333222333333333333 45688887 4555
Q ss_pred HHHHHHHHHHHHhc-CCceeecCCCCChhHHHHHHHHHHHHhcCCCCC
Q 029822 116 AAIMLLSALCFFLA-SPFYVKSKANTSLLSGLIQVLVASYKNRHIKLS 162 (187)
Q Consensus 116 ~v~~~val~~f~~g-~~~y~~~~p~gs~l~~~~~v~~~a~~~~~~~~~ 162 (187)
.-.|+.+.+.+|.- .++|.. .+|++-.- ...+....|.-+.++|
T Consensus 238 ~pl~~~a~f~~w~~ESpRf~~--~~G~~~kA-letL~kiArmNg~qlp 282 (528)
T KOG0253|consen 238 TPLMFAARFLVWVYESPRFYL--AKGDDYKA-LETLHKIARMNGKQLP 282 (528)
T ss_pred hHHHHHHHHHhhcccCcchhh--hcCChHHH-HHHHHHHHHhcCCCCC
Confidence 55677777777774 455543 45554333 3444444443344444
No 214
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=42.18 E-value=59 Score=30.19 Aligned_cols=85 Identities=13% Similarity=0.054 Sum_probs=57.6
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHH-hhhhhhhe-eccCcce
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVA-VTLIVYIQ-DNLGWKV 110 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~-~~~~~~i~-~~~gw~~ 110 (187)
...++.+|..++++..|......+-+..+ ..|+ +.|...-...=+++++|.+++ .+..+.+- ....|++
T Consensus 115 ~~e~li~GR~i~Gl~~gl~~~~~pmyl~E----~sP~-----~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~ 185 (485)
T KOG0569|consen 115 SFEMLILGRLIVGLACGLSTGLVPMYLTE----ISPK-----NLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPY 185 (485)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHHHHHHhh----cChh-----hhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHH
Confidence 34667788888888888888887777663 3332 223333333345899999998 55566654 5567999
Q ss_pred ehhhhHHHHHHHHHHH
Q 029822 111 GFGIPAAIMLLSALCF 126 (187)
Q Consensus 111 gF~i~~v~~~val~~f 126 (187)
.++++.+..++.++.+
T Consensus 186 l~~~~~i~~~~~l~~l 201 (485)
T KOG0569|consen 186 LLAFPLIPALLQLALL 201 (485)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999998766655553
No 215
>PF11027 DUF2615: Protein of unknown function (DUF2615); InterPro: IPR020309 This entry represents a group of uncharacterised protein from the Metazoa, including CD034 (or C4orf34) and YQF4 (or C34C12.4).
Probab=41.54 E-value=30 Score=25.45 Aligned_cols=28 Identities=14% Similarity=0.126 Sum_probs=22.0
Q ss_pred ceehhhhHHHHHHHHHHHHhcCCceeec
Q 029822 109 KVGFGIPAAIMLLSALCFFLASPFYVKS 136 (187)
Q Consensus 109 ~~gF~i~~v~~~val~~f~~g~~~y~~~ 136 (187)
.-.|.+..+.|++|+++|+++-...+..
T Consensus 53 ~~~~~~~~~w~~~A~~ly~~RP~s~R~~ 80 (103)
T PF11027_consen 53 NSMFMMMMLWMVLAMALYLLRPSSLRSR 80 (103)
T ss_pred ccHHHHHHHHHHHHHHHHHcCchhhcCC
Confidence 3457777888999999999988777665
No 216
>PF03988 DUF347: Repeat of Unknown Function (DUF347) ; InterPro: IPR007136 This repeat is found as four tandem repeats in a family of bacterial membrane proteins. Each repeat contains two transmembrane regions and a conserved tryptophan.
Probab=41.32 E-value=40 Score=21.61 Aligned_cols=33 Identities=18% Similarity=0.397 Sum_probs=19.2
Q ss_pred HHH-HhhHhHHHHhhhhhhheeccCcceehhhhHHH
Q 029822 84 YYV-SVSASSMVAVTLIVYIQDNLGWKVGFGIPAAI 118 (187)
Q Consensus 84 ~Y~-~invG~li~~~~~~~i~~~~gw~~gF~i~~v~ 118 (187)
+|| ++-+...+|.+..-++-++.| +|+...++.
T Consensus 2 ~fW~a~ilt~~lGt~~~D~l~~~lg--lg~~~~~~~ 35 (55)
T PF03988_consen 2 FFWIAKILTTTLGTTAGDFLSKTLG--LGYLISTLI 35 (55)
T ss_pred HHHHHHHHHHHhHHHHHHHHHhccC--ccHHHHHHH
Confidence 344 555556667777777777544 444555443
No 217
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=41.08 E-value=98 Score=26.07 Aligned_cols=38 Identities=18% Similarity=0.167 Sum_probs=16.3
Q ss_pred hHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHHHHHh
Q 029822 89 SASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALCFFL 128 (187)
Q Consensus 89 nvG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~f~~ 128 (187)
.+|++++..+. .......| ..+.+.+++.+++++.++.
T Consensus 333 ~~g~~~g~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 370 (377)
T PRK11102 333 GIGAIVGALLS-LAPFTSAW-PMVWSMAFCSILSILFYLY 370 (377)
T ss_pred HHHHHHHHHHH-hccCCChH-HHHHHHHHHHHHHHHHHHH
Confidence 35666665543 22222222 2233334444454444443
No 218
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=40.06 E-value=45 Score=30.07 Aligned_cols=60 Identities=3% Similarity=-0.052 Sum_probs=41.8
Q ss_pred HHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhhee
Q 029822 36 LLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQD 104 (187)
Q Consensus 36 ~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~ 104 (187)
..+..+.+.++|.|..-+.......+..++ +++......+.+..++|..+|..+...+-+
T Consensus 353 ~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~---------~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 353 QAWGLMALLGFSAASALLASTSAIMAAAPP---------EKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhcCCH---------HhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345567778888888877776666665443 344556778888888888888777666643
No 219
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=39.72 E-value=69 Score=26.77 Aligned_cols=41 Identities=7% Similarity=0.121 Sum_probs=24.1
Q ss_pred HHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHH
Q 029822 82 SWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLS 122 (187)
Q Consensus 82 ~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~va 122 (187)
+|.+....++..++....+++.|++|.+..+.+..+.+.++
T Consensus 40 ~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~ 80 (366)
T TIGR00886 40 GNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIP 80 (366)
T ss_pred hHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH
Confidence 45555566666666666677777766665555544443333
No 220
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=39.47 E-value=54 Score=29.67 Aligned_cols=84 Identities=17% Similarity=0.232 Sum_probs=51.9
Q ss_pred HHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHH---Hhhhhhhheecc-CcceehhhhH
Q 029822 41 FGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMV---AVTLIVYIQDNL-GWKVGFGIPA 116 (187)
Q Consensus 41 L~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li---~~~~~~~i~~~~-gw~~gF~i~~ 116 (187)
..++++|.|+.-|-...+..+..++.+. . .++. . |+-.+|.++ ++....++.|.. ||......-+
T Consensus 303 ~~llG~G~G~~F~laL~li~~rs~~a~~--A---a~LS-g-----maQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~ 371 (395)
T COG2807 303 ALLLGLGQGGAFPLALTLILLRSSDAAI--A---AALS-G-----MAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLA 371 (395)
T ss_pred HHHHhCccchHHHHHHHHHHhhcCChHH--H---HHHH-H-----HhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHH
Confidence 4788999999999999999988775432 1 2232 2 244555444 567777887754 6766644433
Q ss_pred HH-HHHHHHHHHhcCCceee
Q 029822 117 AI-MLLSALCFFLASPFYVK 135 (187)
Q Consensus 117 v~-~~val~~f~~g~~~y~~ 135 (187)
++ .++.+.-+..++.+|.+
T Consensus 372 ~~~i~m~i~Gl~a~r~~~i~ 391 (395)
T COG2807 372 LATLLMLIFGLRAGRNRYIR 391 (395)
T ss_pred HHHHHHHHHHhhcchhHHhH
Confidence 32 33344446667776654
No 221
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=36.60 E-value=71 Score=29.66 Aligned_cols=64 Identities=13% Similarity=0.232 Sum_probs=44.9
Q ss_pred hhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHHHH
Q 029822 55 SLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALCF 126 (187)
Q Consensus 55 ~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~f 126 (187)
-.....++|++. .....|++.+....++-+++-.++.+.+-++.||..+-.+.=+.+++..+.|
T Consensus 303 wK~~lk~~~~~~--------~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit~~~F 366 (491)
T PF03219_consen 303 WKSQLKQLYPDP--------NDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILITGLLF 366 (491)
T ss_pred HHHHHHHHCCCc--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHHH
Confidence 334455666533 3578899999888888888888888888899999998777544444444333
No 222
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=36.19 E-value=1.2e+02 Score=27.79 Aligned_cols=79 Identities=16% Similarity=0.085 Sum_probs=44.1
Q ss_pred HHHHHHHHHHhhHhHHHHhhhhhhhe-e-------ccCcceehhhhHHHHHH-HHHHHHhcCCcee-ecCCCC-ChhHHH
Q 029822 78 KSYFSWYYVSVSASSMVAVTLIVYIQ-D-------NLGWKVGFGIPAAIMLL-SALCFFLASPFYV-KSKANT-SLLSGL 146 (187)
Q Consensus 78 ~~~F~~~Y~~invG~li~~~~~~~i~-~-------~~gw~~gF~i~~v~~~v-al~~f~~g~~~y~-~~~p~g-s~l~~~ 146 (187)
++.-++-|...++|+++..++.-.+- . ..+.++++.++++-.++ ++..|+.-+++-+ +..|.+ +.++.-
T Consensus 187 ~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g 266 (477)
T PF11700_consen 187 GRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFG 266 (477)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHH
Confidence 56666667788888888766544431 1 23457777777775433 4444555444433 223333 445555
Q ss_pred HHHHHHHHHh
Q 029822 147 IQVLVASYKN 156 (187)
Q Consensus 147 ~~v~~~a~~~ 156 (187)
++-++..+|+
T Consensus 267 ~~~l~~t~k~ 276 (477)
T PF11700_consen 267 FKRLWRTFKE 276 (477)
T ss_pred HHHHHHHHHH
Confidence 5555555654
No 223
>PF07332 DUF1469: Protein of unknown function (DUF1469); InterPro: IPR009937 This entry represents proteins found in hypothetical bacterial proteins where is is annotated as ycf49 or ycf49-like. The function is not known.
Probab=35.68 E-value=76 Score=23.01 Aligned_cols=27 Identities=19% Similarity=0.267 Sum_probs=17.6
Q ss_pred ceehhhhHH-HHHHHHHHHHhcCCceee
Q 029822 109 KVGFGIPAA-IMLLSALCFFLASPFYVK 135 (187)
Q Consensus 109 ~~gF~i~~v-~~~val~~f~~g~~~y~~ 135 (187)
++++++.++ ..+++.+.++.++++.+.
T Consensus 72 ~~a~liv~~~~l~la~i~~~~~~~~l~~ 99 (121)
T PF07332_consen 72 WLAFLIVAGLYLLLALILLLIGRRRLRR 99 (121)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 466655554 466677777778877764
No 224
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=34.58 E-value=67 Score=28.34 Aligned_cols=34 Identities=15% Similarity=0.091 Sum_probs=19.7
Q ss_pred hHhHHHHhhhhhhheeccCcceehhhhHHHHHHHH
Q 029822 89 SASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSA 123 (187)
Q Consensus 89 nvG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val 123 (187)
++|..+++.+.+++.....| ..|.+.++..++..
T Consensus 140 ~lG~~ig~~l~g~l~~~~~~-~~f~~~~~~~~~~~ 173 (418)
T TIGR00889 140 TIGFIAAMWAVSLLDIELSN-IQLYITAGSSALLG 173 (418)
T ss_pred hHHHHHHHHHHHHhcccchh-HHHHHHHHHHHHHH
Confidence 46778888877777443334 34555555444433
No 225
>COG4327 Predicted membrane protein [Function unknown]
Probab=33.12 E-value=57 Score=23.63 Aligned_cols=25 Identities=8% Similarity=0.284 Sum_probs=19.9
Q ss_pred cCCCCChhHHHHHHHHHHHHhcCCC
Q 029822 136 SKANTSLLSGLIQVLVASYKNRHIK 160 (187)
Q Consensus 136 ~~p~gs~l~~~~~v~~~a~~~~~~~ 160 (187)
.-.+||++|=+.=.++.+++.-+++
T Consensus 56 ma~QGsiitfVvlifvya~r~nkld 80 (101)
T COG4327 56 MAQQGSIITFVVLIFVYAWRMNKLD 80 (101)
T ss_pred hhcCCCeeehHHHHHHHHHHHhHHH
Confidence 3578999998888999998866554
No 226
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=32.90 E-value=81 Score=28.64 Aligned_cols=60 Identities=15% Similarity=0.268 Sum_probs=41.0
Q ss_pred hhhhhhccCCCCCcccchhHHHHHHHHHHH-HHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHH
Q 029822 56 LAFGAEQLEKGDGIKSKSESALKSYFSWYY-VSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSAL 124 (187)
Q Consensus 56 ~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y-~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~ 124 (187)
.=+++++||+ +.....+...+ ++..+|..+-....+++.|++|++..|++-+..+++..+
T Consensus 334 fkYI~~~fd~---------rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~l 394 (412)
T PF01306_consen 334 FKYITAHFDK---------RLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTL 394 (412)
T ss_dssp HHHHHHHS-G---------GGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCH---------hHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHH
Confidence 3455666663 23345556643 578899998899999999999999998776655444333
No 227
>PF10112 Halogen_Hydrol: 5-bromo-4-chloroindolyl phosphate hydrolysis protein; InterPro: IPR018770 This entry consists of prokaryotic proteins that mediate the hydrolysis of 5-bromo-4-chloroindolyl phosphate bonds.
Probab=32.87 E-value=87 Score=25.01 Aligned_cols=15 Identities=7% Similarity=0.195 Sum_probs=7.9
Q ss_pred HHHHHhhHhHHHHhh
Q 029822 83 WYYVSVSASSMVAVT 97 (187)
Q Consensus 83 ~~Y~~invG~li~~~ 97 (187)
|+.+++.++.++..+
T Consensus 10 ~~~~~~~~~~~~~~~ 24 (199)
T PF10112_consen 10 RWILGVLIAAITFLV 24 (199)
T ss_pred HHHHHHHHHHHHHHH
Confidence 444566666654433
No 228
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=32.54 E-value=12 Score=32.80 Aligned_cols=83 Identities=17% Similarity=0.221 Sum_probs=54.0
Q ss_pred ccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHHHHHhc
Q 029822 50 GIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALCFFLA 129 (187)
Q Consensus 50 g~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~f~~g 129 (187)
+.-+....+.++.|+. +.|.......+...++++++++.+.+++.++.+-...|.+-++.++++.++.
T Consensus 365 g~~~~~~~~~~ElfPt---------~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~--- 432 (451)
T PF00083_consen 365 GWGPLPWIYTAELFPT---------KVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFV--- 432 (451)
T ss_pred cccccccccccccccc---------cccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhhe---
Confidence 4446665677888874 3466777888888889999999999999888774455555555444444321
Q ss_pred CCceeecCCCCChhHHH
Q 029822 130 SPFYVKSKANTSLLSGL 146 (187)
Q Consensus 130 ~~~y~~~~p~gs~l~~~ 146 (187)
....+|..|.++.++
T Consensus 433 --~~~lpET~g~~l~ei 447 (451)
T PF00083_consen 433 --YFFLPETKGKTLEEI 447 (451)
T ss_pred --eEEEeeCCCCCHHHH
Confidence 222345666666554
No 229
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=31.39 E-value=41 Score=24.39 Aligned_cols=51 Identities=14% Similarity=0.268 Sum_probs=28.4
Q ss_pred HHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHHHHHhcCCceee
Q 029822 82 SWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALCFFLASPFYVK 135 (187)
Q Consensus 82 ~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~f~~g~~~y~~ 135 (187)
.|+-+.+.+|+++|.+. ++.++..+|. .|.+-+.+. +..++-+=-.+.|++
T Consensus 26 r~~q~ilti~aiVg~i~-Gf~~Qqls~t-vy~vg~~~v-~t~li~LPpwP~y~r 76 (101)
T KOG4112|consen 26 RFQQLILTIGAIVGFIY-GFAQQQLSVT-VYIVGAGFV-FTLLITLPPWPWYRR 76 (101)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHH-HHHHHHHHH-HHHHhcCCCchhhhc
Confidence 45667899999988665 6666667763 333333333 233222334455554
No 230
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=29.57 E-value=1.5e+02 Score=27.64 Aligned_cols=52 Identities=19% Similarity=0.203 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHHHH
Q 029822 75 SALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALCF 126 (187)
Q Consensus 75 ~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~f 126 (187)
.+.+...+..--+.-+|+++|....+++.+.+|-+.+++++.+...++.+.+
T Consensus 56 ~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~ 107 (485)
T KOG0569|consen 56 STLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLM 107 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHH
Confidence 4556555555557889999999999999999999988877776655555443
No 231
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=28.34 E-value=1.6e+02 Score=22.79 Aligned_cols=56 Identities=11% Similarity=0.153 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhh
Q 029822 34 LMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTL 98 (187)
Q Consensus 34 ~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~ 98 (187)
...+|.+=.+.++|.+.+...........-++ +++.+.+++|+-..+.+.++|.+.
T Consensus 89 ~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~---------~~~~~~~~ifw~i~~~s~i~G~~~ 144 (156)
T PF05978_consen 89 SYTLYPASALLGFGAALLWTAQGTYLTSYSTE---------ETIGRNTGIFWAIFQSSLIFGNLF 144 (156)
T ss_pred HHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCH---------HHHhhHHHHHHHHHHHHHHHHHHH
Confidence 45666677788888888887776665543332 355666777766677777666544
No 232
>PF14045 YIEGIA: YIEGIA protein
Probab=27.97 E-value=53 Score=28.36 Aligned_cols=69 Identities=16% Similarity=0.274 Sum_probs=42.8
Q ss_pred CCCCchhHHHHHHHHHHHhhcccccc-c----------chhhhhhhccCCCCCccc---------c--------hhHHHH
Q 029822 27 ESATGSQLMLLYLAFGLMSLGGGGIR-S----------SSLAFGAEQLEKGDGIKS---------K--------SESALK 78 (187)
Q Consensus 27 ~~~~~~~~~~~~~aL~liavG~Gg~k-p----------~~~~~~adqf~~~~~~~~---------~--------~~~~~~ 78 (187)
+.|+..|.-+..++|.++|-+-|.+- | .-.++.+.||++-...|+ | .|---.
T Consensus 24 QYPtYPhG~iiHi~LG~IAa~LGavaiPAL~~keytAvTFLaLAaqQFRdVR~mER~tL~~le~~ELV~RG~~YIEgIA~ 103 (285)
T PF14045_consen 24 QYPTYPHGYIIHISLGFIAAALGAVAIPALLEKEYTAVTFLALAAQQFRDVRNMERETLTNLEETELVPRGAAYIEGIAK 103 (285)
T ss_pred cCCCCCccchhHHHHHHHHHHhhhhhhHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccchHHHHHHHH
Confidence 45666777778888888888877764 2 335678899986544333 1 223334
Q ss_pred HHHHHHHHHhhHhHHHH
Q 029822 79 SYFSWYYVSVSASSMVA 95 (187)
Q Consensus 79 ~~F~~~Y~~invG~li~ 95 (187)
.|-+.-|+++-..-+.+
T Consensus 104 ~FEaRNYl~m~ts~~Ts 120 (285)
T PF14045_consen 104 TFEARNYLVMFTSFLTS 120 (285)
T ss_pred HHHhhhHHHHHHHHHHH
Confidence 45566677765554433
No 233
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=26.42 E-value=2.3e+02 Score=25.79 Aligned_cols=85 Identities=15% Similarity=0.246 Sum_probs=54.8
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHH----HHHhhHhHHHHhhhhhhh----e-
Q 029822 33 QLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWY----YVSVSASSMVAVTLIVYI----Q- 103 (187)
Q Consensus 33 ~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~----Y~~invG~li~~~~~~~i----~- 103 (187)
+.++|..++.++++|+|.+-....+...|.-.++.. .-+..-| -.+.-+|.+++..+.... .
T Consensus 300 ~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~a---------G~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~ 370 (403)
T PF03209_consen 300 SPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRA---------GLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGN 370 (403)
T ss_pred cchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcch---------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 468899999999999999987777777777654321 1222222 223445555554443332 2
Q ss_pred -eccCcceehhhhHHHHHHHHHHH
Q 029822 104 -DNLGWKVGFGIPAAIMLLSALCF 126 (187)
Q Consensus 104 -~~~gw~~gF~i~~v~~~val~~f 126 (187)
...+|...|.+-++.+++++++.
T Consensus 371 ~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 371 SPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHH
Confidence 23578888999988888887754
No 234
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=25.69 E-value=35 Score=23.56 Aligned_cols=19 Identities=21% Similarity=0.319 Sum_probs=7.0
Q ss_pred HHHHhhhhhhheeccCcce
Q 029822 92 SMVAVTLIVYIQDNLGWKV 110 (187)
Q Consensus 92 ~li~~~~~~~i~~~~gw~~ 110 (187)
.+++.....++.|++|.+.
T Consensus 11 ~~~~~~~~g~~~d~~g~~~ 29 (141)
T TIGR00880 11 QLIYSPLSGLLTDRFGRKP 29 (141)
T ss_pred HHHHHhhHHHHHhhcchhH
Confidence 3333333333333333333
No 235
>KOG2447 consensus Oligosaccharyltransferase, delta subunit (ribophorin II) [Posttranslational modification, protein turnover, chaperones]
Probab=24.90 E-value=90 Score=26.98 Aligned_cols=61 Identities=13% Similarity=0.250 Sum_probs=45.7
Q ss_pred hhHHHHHHHHHHHHHhhHhHHHHhhhhhhhee---------ccCcceehhhhHHHHHHHHHHHHhcCCcee
Q 029822 73 SESALKSYFSWYYVSVSASSMVAVTLIVYIQD---------NLGWKVGFGIPAAIMLLSALCFFLASPFYV 134 (187)
Q Consensus 73 ~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~---------~~gw~~gF~i~~v~~~val~~f~~g~~~y~ 134 (187)
||++-...-+.-+..+.+-.+++.+ ..|.+- ..+|+.+|-...+++.+-..+||++-..+.
T Consensus 191 PeKRp~~~lS~iFt~iiv~pll~Ll-v~W~klg~Nv~n~pss~~s~~~Fh~gi~g~~vL~f~yWlqlsmFq 260 (287)
T KOG2447|consen 191 PEKRPAKPLSDIFTGIIVSPLLGLL-VLWLKLGANVSNFPSSPTSTLGFHAGIAGILVLFFVYWLQLSMFQ 260 (287)
T ss_pred CCcCccchhHHHHHHHHHHHHHHHH-HHHHHhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 5566666777777788888888855 456542 235999999999999999999998876653
No 236
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=24.84 E-value=2e+02 Score=21.06 Aligned_cols=46 Identities=17% Similarity=0.228 Sum_probs=34.0
Q ss_pred HHHHHHH-HhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHHH
Q 029822 80 YFSWYYV-SVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALC 125 (187)
Q Consensus 80 ~F~~~Y~-~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~ 125 (187)
..+|... ...++.+++....+.-.++-||-+|..+...-.++-+++
T Consensus 38 ~~~~~~~~i~~ls~~~GG~~a~~~~~~kG~l~G~~~Gl~y~~il~li 84 (116)
T PF12670_consen 38 ILPWLVVIIYILSVFIGGFYAGRKAGSKGWLHGLLVGLLYFLILLLI 84 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHH
Confidence 5566544 566777788888888888899999999888765555444
No 237
>PF06814 Lung_7-TM_R: Lung seven transmembrane receptor; InterPro: IPR009637 This family represents a conserved region with eukaryotic lung seven transmembrane receptors and related proteins.; GO: 0016021 integral to membrane
Probab=24.65 E-value=2.3e+02 Score=23.91 Aligned_cols=25 Identities=28% Similarity=0.285 Sum_probs=20.2
Q ss_pred hhHHHHHHHHHHHhhcccccccchh
Q 029822 32 SQLMLLYLAFGLMSLGGGGIRSSSL 56 (187)
Q Consensus 32 ~~~~~~~~aL~liavG~Gg~kp~~~ 56 (187)
.+..+++.-+.+++.|-|..||.+.
T Consensus 124 ~k~~~~~~llllis~Gygivkp~L~ 148 (295)
T PF06814_consen 124 LKRTLSFFLLLLISLGYGIVKPSLG 148 (295)
T ss_pred HHHHHHHHHHHHHhcchheeccccC
Confidence 3456677788899999999999853
No 238
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=24.07 E-value=95 Score=28.98 Aligned_cols=66 Identities=14% Similarity=0.218 Sum_probs=51.1
Q ss_pred CCchhHHHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhh
Q 029822 29 ATGSQLMLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYI 102 (187)
Q Consensus 29 ~~~~~~~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i 102 (187)
.......++.++..++=+.+-..+...-++.+|....++. ++ + ..+||-+.+-+|..++....+|.
T Consensus 137 ~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~------~~-~-Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 137 VKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAK------KT-R-ANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred cchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhh------hh-c-cchhHHHHHHhcceeeeeccccc
Confidence 3445678888899998898888888888999999886543 22 2 77788778888988888777765
No 239
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=23.70 E-value=2.1e+02 Score=24.39 Aligned_cols=41 Identities=20% Similarity=0.081 Sum_probs=22.9
Q ss_pred HHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHH
Q 029822 82 SWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLS 122 (187)
Q Consensus 82 ~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~va 122 (187)
+|......+|..++....+++.|++|.+..+.+..+.+.++
T Consensus 41 ~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~ 81 (392)
T PRK10473 41 HIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIA 81 (392)
T ss_pred HHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHH
Confidence 34444445555556666677777777665555554444333
No 240
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=23.68 E-value=1.6e+02 Score=26.19 Aligned_cols=79 Identities=14% Similarity=0.151 Sum_probs=49.5
Q ss_pred HHHHHHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheec---cCccee
Q 029822 35 MLLYLAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDN---LGWKVG 111 (187)
Q Consensus 35 ~~~~~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~---~gw~~g 111 (187)
..-++|.+++-.-.|.+.|.+. +...||-++ +.+....|||-.-.|+=. . +++-.+++. .+=+..
T Consensus 345 ~~s~i~F~~~E~cvGlfwPSim-kmRsqyIPE--------earstimNfFRvPLnifv--C-lvLynlh~~~~p~~tr~m 412 (454)
T KOG4332|consen 345 SESLIGFCLFEACVGLFWPSIM-KMRSQYIPE--------EARSTIMNFFRVPLNIFV--C-LVLYNLHVDAFPTTTRNM 412 (454)
T ss_pred hHHHHHHHHHHHHHhhcchHHH-HHHHhhCCH--------HHHhhhhhheechhhHhh--h-hhheecccccCccccchh
Confidence 3336677777677788888875 455666533 467888899976555432 2 222222221 345577
Q ss_pred hhhhHHHHHHHHHH
Q 029822 112 FGIPAAIMLLSALC 125 (187)
Q Consensus 112 F~i~~v~~~val~~ 125 (187)
|.+|.+.++++.+.
T Consensus 413 f~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 413 FGICSAFLFVASIL 426 (454)
T ss_pred hhhhHHHHHHHHHH
Confidence 99999999888653
No 241
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=23.08 E-value=1.9e+02 Score=26.52 Aligned_cols=63 Identities=25% Similarity=0.251 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehhhhHHHHHHHHHH--HHhcCCceeecCC
Q 029822 76 ALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAIMLLSALC--FFLASPFYVKSKA 138 (187)
Q Consensus 76 ~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~~~val~~--f~~g~~~y~~~~p 138 (187)
.|...+..-.-++-.+..+++....++.+..|+...|.++++..+++++- +.+......++.+
T Consensus 145 ~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~ 209 (463)
T KOG2816|consen 145 ERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERS 209 (463)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccc
Confidence 45555555555667788888888889989999999999999877666653 3334444544444
No 242
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=23.00 E-value=2.2e+02 Score=18.37 Aligned_cols=35 Identities=9% Similarity=0.026 Sum_probs=26.1
Q ss_pred HHHHhhHhHHHHhhhhhhheeccCcceehhhhHHH
Q 029822 84 YYVSVSASSMVAVTLIVYIQDNLGWKVGFGIPAAI 118 (187)
Q Consensus 84 ~Y~~invG~li~~~~~~~i~~~~gw~~gF~i~~v~ 118 (187)
+.|+.-+|-.++.++.+..+..+++..+-.++.+.
T Consensus 7 ~fWs~il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~ 41 (57)
T PF11151_consen 7 FFWSFILGEVVGYIGSSLTGVTYNFTTAAIIAVIF 41 (57)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHH
Confidence 56788888888888888878888877666655553
No 243
>PRK03612 spermidine synthase; Provisional
Probab=21.45 E-value=1.2e+02 Score=28.16 Aligned_cols=51 Identities=10% Similarity=0.064 Sum_probs=30.5
Q ss_pred HHHHHHHHhhHhHHHHhhhhhhhee-ccCc-ceehhhhHHHHHHHHHHHHhcC
Q 029822 80 YFSWYYVSVSASSMVAVTLIVYIQD-NLGW-KVGFGIPAAIMLLSALCFFLAS 130 (187)
Q Consensus 80 ~F~~~Y~~invG~li~~~~~~~i~~-~~gw-~~gF~i~~v~~~val~~f~~g~ 130 (187)
-...-|..-.+|+++|.++.+++-- ..|- ...++++.+.++++++.++..+
T Consensus 146 ~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~~~~~~ 198 (521)
T PRK03612 146 NVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVFLWLFR 198 (521)
T ss_pred hhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566677788888888777666533 3443 3445555555666655544433
No 244
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=20.98 E-value=63 Score=29.52 Aligned_cols=84 Identities=19% Similarity=0.162 Sum_probs=54.9
Q ss_pred HHHHHHhhcccccccchhhhhhhccCCCCCcccchhHHHHHHHHHHHHHhhHhHHHHhhhhhhheeccCcceehh-hhHH
Q 029822 39 LAFGLMSLGGGGIRSSSLAFGAEQLEKGDGIKSKSESALKSYFSWYYVSVSASSMVAVTLIVYIQDNLGWKVGFG-IPAA 117 (187)
Q Consensus 39 ~aL~liavG~Gg~kp~~~~~~adqf~~~~~~~~~~~~~~~~~F~~~Y~~invG~li~~~~~~~i~~~~gw~~gF~-i~~v 117 (187)
.++.++++=++.+-|++.++.-+-.++++.. .+ -.-..-.+|+.+-+.+.+++.|.+|-...+. ++..
T Consensus 329 ~~l~~ig~F~simfPTIfslal~~l~~~ts~--------~s---~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pll 397 (422)
T COG0738 329 YALFLIGLFNSIMFPTIFSLALKNLGEHTSV--------GS---GLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLL 397 (422)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhccCccccc--------cc---eeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 3556677778889999999999998855431 11 1222355677778888899999998888766 5555
Q ss_pred HHHHHHHHHHhcCCcee
Q 029822 118 IMLLSALCFFLASPFYV 134 (187)
Q Consensus 118 ~~~val~~f~~g~~~y~ 134 (187)
|. +.++.|....+.++
T Consensus 398 c~-lyV~~~~~~~~~~k 413 (422)
T COG0738 398 CY-LYVLFFALIGKKSK 413 (422)
T ss_pred HH-HHHHHHHHHhcccc
Confidence 43 33344444444343
No 245
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=20.57 E-value=2.8e+02 Score=22.45 Aligned_cols=31 Identities=13% Similarity=0.261 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHhhHhHHHHhhhhhhheec
Q 029822 75 SALKSYFSWYYVSVSASSMVAVTLIVYIQDN 105 (187)
Q Consensus 75 ~~~~~~F~~~Y~~invG~li~~~~~~~i~~~ 105 (187)
++..+.+.|-..+.-+|.++|..+.++++..
T Consensus 137 ~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~~ 167 (194)
T PF11833_consen 137 RKLGRAFLWTLGGLVVGLILGSLLASWLPVD 167 (194)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 4677788888888888999998888888664
No 246
>PF13937 DUF4212: Domain of unknown function (DUF4212)
Probab=20.52 E-value=2.3e+02 Score=19.80 Aligned_cols=21 Identities=19% Similarity=0.226 Sum_probs=14.9
Q ss_pred ccCcceehhhhHHHHHHHHHH
Q 029822 105 NLGWKVGFGIPAAIMLLSALC 125 (187)
Q Consensus 105 ~~gw~~gF~i~~v~~~val~~ 125 (187)
-.||.++|.+++=+..+..++
T Consensus 41 ~~GfPlgfw~aaQGsi~~fvi 61 (81)
T PF13937_consen 41 FGGFPLGFWFAAQGSIIVFVI 61 (81)
T ss_pred eCCCChHHHHHHHhHHHHHHH
Confidence 369999999998664444443
No 247
>PF12650 DUF3784: Domain of unknown function (DUF3784); InterPro: IPR017259 This group represents an uncharacterised conserved protein.
Probab=20.34 E-value=1.8e+02 Score=20.31 Aligned_cols=23 Identities=4% Similarity=0.144 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHhhHhHHHHhh
Q 029822 75 SALKSYFSWYYVSVSASSMVAVT 97 (187)
Q Consensus 75 ~~~~~~F~~~Y~~invG~li~~~ 97 (187)
++..+....+...+.+..+++.+
T Consensus 40 ~~l~r~~g~~~~~~~i~~li~~l 62 (97)
T PF12650_consen 40 KKLCRFMGKFMLIIGIILLIGGL 62 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666777766666665555544
Done!