BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029824
(187 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0IH40|DNLZ_XENLA DNL-type zinc finger protein OS=Xenopus laevis GN=dnlz PE=2 SV=1
Length = 188
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 51/68 (75%), Gaps = 3/68 (4%)
Query: 102 MIFTCKVCETRSVKTACRESYEKGVVVARCGGCNNLHLIADHLGWFGE---PGSIEDFLA 158
+I+TCKVC TRS KT + +Y KGVV+ RC GC N H+IAD+LGWF + +IE+ LA
Sbjct: 84 LIYTCKVCATRSSKTISKVAYHKGVVIVRCPGCENHHIIADNLGWFSDLEGRRNIEEILA 143
Query: 159 ARGEEVKK 166
A+GE+V++
Sbjct: 144 AKGEQVQR 151
>sp|Q9D113|DNLZ_MOUSE DNL-type zinc finger protein OS=Mus musculus GN=Dnlz PE=2 SV=1
Length = 177
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 54/80 (67%), Gaps = 4/80 (5%)
Query: 102 MIFTCKVCETRSVKTACRESYEKGVVVARCGGCNNLHLIADHLGWFGE---PGSIEDFLA 158
+++TCKVC TRS K + +Y +GVV+ C GC N H+IAD+L WF + +IE+ LA
Sbjct: 75 LVYTCKVCGTRSSKRISKLAYHQGVVIVTCPGCQNHHIIADNLSWFSDLKGKRNIEEILA 134
Query: 159 ARGEEVKKGSVD-TLNLTLE 177
ARGEEV++ S D L L LE
Sbjct: 135 ARGEEVRRVSGDGALELILE 154
>sp|A1L1P7|DNLZ_DANRE DNL-type zinc finger protein OS=Danio rerio GN=dnlz PE=2 SV=1
Length = 183
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 54/82 (65%), Gaps = 6/82 (7%)
Query: 88 ATSNLKTSARHDLAMIFTCKVCETRSVKTACRESYEKGVVVARCGGCNNLHLIADHLGWF 147
A L+++ H +++TCKVC TRS+K + +Y KGVV+ C GC N H+IAD+L WF
Sbjct: 72 AIGQLQSTHYH---LVYTCKVCSTRSMKKISKLAYHKGVVIVTCPGCKNHHVIADNLKWF 128
Query: 148 GE---PGSIEDFLAARGEEVKK 166
+ +IE+ LAA+GE V++
Sbjct: 129 SDLEGKRNIEEILAAKGESVRR 150
>sp|Q5SXM8|DNLZ_HUMAN DNL-type zinc finger protein OS=Homo sapiens GN=DNLZ PE=2 SV=1
Length = 178
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Query: 102 MIFTCKVCETRSVKTACRESYEKGVVVARCGGCNNLHLIADHLGWFGE---PGSIEDFLA 158
+++TCKVC TRS K + +Y +GVV+ C GC N H+IAD+LGWF + +IE+ L
Sbjct: 71 LVYTCKVCGTRSSKRISKLAYHQGVVIVTCPGCQNHHIIADNLGWFSDLNGKRNIEEILT 130
Query: 159 ARGEEVKK-GSVDTLNLTLE 177
ARGE+V + L L LE
Sbjct: 131 ARGEQVHRVAGEGALELVLE 150
>sp|Q09759|YA72_SCHPO Uncharacterized protein C24H6.02c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC24H6.02c PE=4 SV=1
Length = 175
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 13/115 (11%)
Query: 60 VTDADQEQHEAGNSMPSKSNDSSAVKLSATSNLKTSARHDLAMIFTCKVCETRSVKTACR 119
T +D + +G +PS +D+ ++ T N+ FTC VC TRS +
Sbjct: 48 FTQSDAKDLASG--VPSVKSDADQLQPKPTYNVS----------FTCTVCNTRSNHNFSK 95
Query: 120 ESYEKGVVVARCGGCNNLHLIADHLGWFGEPG-SIEDFLAARGEEVKKGSVDTLN 173
++Y G V+ +C C N HL+ADHL F E +IED LA +GE KKG +N
Sbjct: 96 QAYHNGTVLVQCPKCKNRHLMADHLKIFSEERVTIEDILAKKGETFKKGYGQVIN 150
>sp|P42844|ZIM17_YEAST Mitochondrial protein import protein ZIM17 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ZIM17 PE=1
SV=2
Length = 174
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 100 LAMIFTCKVCETRSVKTACRESYEKGVVVARCGGCNNLHLIADHLGWFGEPG-SIEDFLA 158
+ + FTCK C TRS T +++YEKG V+ C C HLIADHL F + ++E +
Sbjct: 69 MMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHLIADHLKIFHDHHVTVEQLMK 128
Query: 159 ARGEEVKKGSVDTLNLTLEDLAGREVLKD 187
A GE+V S D +L ED+ + LKD
Sbjct: 129 ANGEQV---SQDVGDLEFEDIP--DSLKD 152
>sp|A6ZSH0|ZIM17_YEAS7 Mitochondrial protein import protein ZIM17 OS=Saccharomyces
cerevisiae (strain YJM789) GN=ZIM17 PE=3 SV=2
Length = 174
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 100 LAMIFTCKVCETRSVKTACRESYEKGVVVARCGGCNNLHLIADHLGWFGEPG-SIEDFLA 158
+ + FTCK C TRS T +++YEKG V+ C C HLIADHL F + ++E +
Sbjct: 69 MMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHLIADHLKIFHDHHVTVEQLMK 128
Query: 159 ARGEEVKKGSVDTLNLTLEDLAGREVLKD 187
A GE+V S D +L ED+ + LKD
Sbjct: 129 ANGEQV---SQDVGDLEFEDIP--DSLKD 152
>sp|B5VQB0|ZIM17_YEAS6 Mitochondrial protein import protein ZIM17 OS=Saccharomyces
cerevisiae (strain AWRI1631) GN=ZIM17 PE=3 SV=2
Length = 174
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 100 LAMIFTCKVCETRSVKTACRESYEKGVVVARCGGCNNLHLIADHLGWFGEPG-SIEDFLA 158
+ + FTCK C TRS T +++YEKG V+ C C HLIADHL F + ++E +
Sbjct: 69 MMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHLIADHLKIFHDHHVTVEQLMK 128
Query: 159 ARGEEVKKGSVDTLNLTLEDLAGREVLKD 187
A GE+V S D +L ED+ + LKD
Sbjct: 129 ANGEQV---SQDVGDLEFEDIP--DSLKD 152
>sp|B3LPE4|ZIM17_YEAS1 Mitochondrial protein import protein ZIM17 OS=Saccharomyces
cerevisiae (strain RM11-1a) GN=ZIM17 PE=3 SV=2
Length = 174
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 100 LAMIFTCKVCETRSVKTACRESYEKGVVVARCGGCNNLHLIADHLGWFGEPG-SIEDFLA 158
+ + FTCK C TRS T +++YEKG V+ C C HLIADHL F + ++E +
Sbjct: 69 MMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHLIADHLKIFHDHHVTVEQLMK 128
Query: 159 ARGEEVKKGSVDTLNLTLEDLAGREVLKD 187
A GE+V S D +L ED+ + LKD
Sbjct: 129 ANGEQV---SQDVGDLEFEDIP--DSLKD 152
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.128 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,335,611
Number of Sequences: 539616
Number of extensions: 2227284
Number of successful extensions: 6395
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 6381
Number of HSP's gapped (non-prelim): 19
length of query: 187
length of database: 191,569,459
effective HSP length: 111
effective length of query: 76
effective length of database: 131,672,083
effective search space: 10007078308
effective search space used: 10007078308
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)