BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029825
(187 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224099821|ref|XP_002311634.1| predicted protein [Populus trichocarpa]
gi|222851454|gb|EEE89001.1| predicted protein [Populus trichocarpa]
Length = 175
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 116/171 (67%), Positives = 139/171 (81%), Gaps = 3/171 (1%)
Query: 1 MKRPMPWGDQVDVISSDDSASDGDA---DNGLDGRQSSNDMTIDQPTKELTSEGSLFRRA 57
MKR +PW D VDVISSD+S+S ++GLDG++ SN +TIDQP KE TSEG L RRA
Sbjct: 1 MKRTIPWTDPVDVISSDESSSSDSDIELNDGLDGQRLSNYVTIDQPIKETTSEGVLIRRA 60
Query: 58 EMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNIHLKQWDQLRFGTED 117
EMYQ+YM+ +PIP QR S IPF+SW GLG SIKQLY+QPLHYLTNI L +WDQ R G+ED
Sbjct: 61 EMYQDYMRHIPIPVQRGSAIPFSSWAGLGKSIKQLYQQPLHYLTNILLNKWDQQRIGSED 120
Query: 118 EHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVFIDSI 168
EH PLD ++HPCKAEAT+WL+EEVHR TS HHH+AK+W SDPMH+ F+DSI
Sbjct: 121 EHTPLDIMIHPCKAEATIWLVEEVHRRTSSHHHVAKIWQSDPMHHAFVDSI 171
>gi|255552097|ref|XP_002517093.1| conserved hypothetical protein [Ricinus communis]
gi|223543728|gb|EEF45256.1| conserved hypothetical protein [Ricinus communis]
Length = 175
Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 115/171 (67%), Positives = 135/171 (78%), Gaps = 3/171 (1%)
Query: 1 MKRPMPWGDQVDVISSDDS-ASDGD--ADNGLDGRQSSNDMTIDQPTKELTSEGSLFRRA 57
MKR MPW +Q+DVISSD+S +SDGD D LDG + S +TI Q KE+TSE L RRA
Sbjct: 1 MKRTMPWNEQIDVISSDESTSSDGDMETDVVLDGHKPSPRITISQSLKEITSEDVLIRRA 60
Query: 58 EMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNIHLKQWDQLRFGTED 117
EMYQ+YM+QLPIP S+IPF+SWVGLG SIKQLY QPLHYLTNI LKQWDQLRF D
Sbjct: 61 EMYQDYMRQLPIPVHHGSVIPFSSWVGLGKSIKQLYGQPLHYLTNILLKQWDQLRFDNGD 120
Query: 118 EHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVFIDSI 168
E K LD ++HPCKAEA+VWL+EE+HR TS H++AKLWL DPMH+ F+DSI
Sbjct: 121 EQKSLDIVIHPCKAEASVWLVEEIHRCTSSPHYVAKLWLLDPMHHAFVDSI 171
>gi|449432680|ref|XP_004134127.1| PREDICTED: protein RDM1-like isoform 1 [Cucumis sativus]
gi|449432682|ref|XP_004134128.1| PREDICTED: protein RDM1-like isoform 2 [Cucumis sativus]
gi|449504162|ref|XP_004162269.1| PREDICTED: protein RDM1-like isoform 1 [Cucumis sativus]
gi|449504166|ref|XP_004162270.1| PREDICTED: protein RDM1-like isoform 2 [Cucumis sativus]
Length = 174
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 113/172 (65%), Positives = 138/172 (80%), Gaps = 6/172 (3%)
Query: 1 MKRPMPWGDQVDVISSDDSASD----GDADNGLDGRQSSNDMTIDQPTKELTSEGSLFRR 56
MKRPMPW +QVD+ISS +S+S ++G + + S +D I P KE+TSEG L +R
Sbjct: 1 MKRPMPWNEQVDIISSGESSSSDSEAAIQNDGYEFKPSLDDFKI--PAKEMTSEGMLMKR 58
Query: 57 AEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNIHLKQWDQLRFGTE 116
AEMYQEYMKQ+ IP QR S+IPFT+W+GLG SIKQLY QPLHYLTNI LKQWDQLR G+
Sbjct: 59 AEMYQEYMKQIQIPAQRGSVIPFTTWMGLGKSIKQLYGQPLHYLTNILLKQWDQLRLGSA 118
Query: 117 DEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVFIDSI 168
DE+KPLD+++HP KAEATVWL+EE+HR TS HHH+AKLWLSDPMH ++DSI
Sbjct: 119 DEYKPLDTVIHPSKAEATVWLVEEIHRRTSSHHHVAKLWLSDPMHQAYVDSI 170
>gi|297737087|emb|CBI26288.3| unnamed protein product [Vitis vinifera]
Length = 174
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/171 (63%), Positives = 136/171 (79%), Gaps = 4/171 (2%)
Query: 1 MKRPMPWGDQVDVISSDDSASDG---DADNGLDGRQSSNDMTIDQPTKELTSEGSLFRRA 57
MKR PW +QVDVISSD+S+S + DNG ++S D+TIDQP ++ E + RRA
Sbjct: 1 MKRAFPWNEQVDVISSDESSSSNPGVEVDNGSVDKKSM-DITIDQPARQEPFEDVVIRRA 59
Query: 58 EMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNIHLKQWDQLRFGTED 117
EMYQEYMKQ+PIP +R S+IPF +W+GL SIKQLY QPLHYLTNI +KQWDQLR G++D
Sbjct: 60 EMYQEYMKQIPIPARRGSLIPFDTWMGLAKSIKQLYGQPLHYLTNILVKQWDQLRIGSKD 119
Query: 118 EHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVFIDSI 168
E++ LDS++HP KAEA++WLIEEVHR T+ HH+AKLWLSDPMHY F+DSI
Sbjct: 120 ENRSLDSIIHPSKAEASIWLIEEVHRQTTSPHHMAKLWLSDPMHYAFVDSI 170
>gi|359477543|ref|XP_002279112.2| PREDICTED: protein RDM1 [Vitis vinifera]
Length = 137
Score = 202 bits (513), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 90/132 (68%), Positives = 111/132 (84%)
Query: 37 DMTIDQPTKELTSEGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQP 96
D+TIDQP ++ E + RRAEMYQEYMKQ+PIP +R S+IPF +W+GL SIKQLY QP
Sbjct: 2 DITIDQPARQEPFEDVVIRRAEMYQEYMKQIPIPARRGSLIPFDTWMGLAKSIKQLYGQP 61
Query: 97 LHYLTNIHLKQWDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWL 156
LHYLTNI +KQWDQLR G++DE++ LDS++HP KAEA++WLIEEVHR T+ HH+AKLWL
Sbjct: 62 LHYLTNILVKQWDQLRIGSKDENRSLDSIIHPSKAEASIWLIEEVHRQTTSPHHMAKLWL 121
Query: 157 SDPMHYVFIDSI 168
SDPMHY F+DSI
Sbjct: 122 SDPMHYAFVDSI 133
>gi|351722067|ref|NP_001237231.1| uncharacterized protein LOC100500129 [Glycine max]
gi|255629410|gb|ACU15051.1| unknown [Glycine max]
Length = 165
Score = 198 bits (503), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 120/168 (71%), Gaps = 11/168 (6%)
Query: 1 MKRPMPWGDQVDVISSDDSASDGDADNGLDGRQSSNDMTIDQPTKELTSEGSLFRRAEMY 60
MKR PW +Q+DV SS S N +TI + S+ +L RRAEMY
Sbjct: 1 MKRSFPWENQIDVSSSSSPNS-----------LRPNPLTIPNSPIDTKSQDALIRRAEMY 49
Query: 61 QEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNIHLKQWDQLRFGTEDEHK 120
Q+YMKQ+PIP R ++IPFTSW+GLG S+KQ+Y QPLHYLTNI LKQWDQLR G+EDE+K
Sbjct: 50 QDYMKQIPIPNHRGTMIPFTSWMGLGRSMKQIYGQPLHYLTNILLKQWDQLRIGSEDEYK 109
Query: 121 PLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVFIDSI 168
PLD++VHP KAEAT+WLIEE+HR TS H HLA LW DPM+ F+DSI
Sbjct: 110 PLDNIVHPHKAEATIWLIEEIHRQTSSHFHLASLWKVDPMYNGFVDSI 157
>gi|297830986|ref|XP_002883375.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297329215|gb|EFH59634.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 167
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/150 (60%), Positives = 113/150 (75%), Gaps = 2/150 (1%)
Query: 19 SASDGDADNGLDGRQSSNDMTIDQPTKELTSEGSLFRRAEMYQEYMKQLPIPTQRSSIIP 78
SA G +D +D S +D +++ EGSL RRAEMYQEYMKQ+PIPT R S+IP
Sbjct: 12 SADSGSSD--VDAEISDGFSPLDNSHRDVADEGSLLRRAEMYQEYMKQVPIPTNRGSLIP 69
Query: 79 FTSWVGLGNSIKQLYEQPLHYLTNIHLKQWDQLRFGTEDEHKPLDSLVHPCKAEATVWLI 138
FTSWVGL S+KQLY QPLHYLTN+ L++WDQ RFGT+ E + LDS+ HP KAEAT+WL+
Sbjct: 70 FTSWVGLSISMKQLYGQPLHYLTNVLLQRWDQSRFGTDSEEQSLDSIFHPSKAEATIWLV 129
Query: 139 EEVHRLTSCHHHLAKLWLSDPMHYVFIDSI 168
EE+HR+TS H H+A LW SDPM++ FID I
Sbjct: 130 EEIHRITSSHLHIASLWGSDPMYHSFIDPI 159
>gi|357480933|ref|XP_003610752.1| hypothetical protein MTR_5g006610 [Medicago truncatula]
gi|355512087|gb|AES93710.1| hypothetical protein MTR_5g006610 [Medicago truncatula]
gi|388497794|gb|AFK36963.1| unknown [Medicago truncatula]
Length = 179
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/171 (56%), Positives = 121/171 (70%), Gaps = 3/171 (1%)
Query: 1 MKRPMPWG-DQVDVISSDDSASDGDADNGLDGRQSSNDMTID--QPTKELTSEGSLFRRA 57
MKRP PW D++DV S S + + S + I P+ ++ S +L RRA
Sbjct: 1 MKRPFPWDEDEIDVSDSSSSDDSPNETPNVATVLPSIHIHIPLPNPSSDVNSLDALTRRA 60
Query: 58 EMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNIHLKQWDQLRFGTED 117
MYQ+YMK +PIP+ R S+IPFTSW+GLG SIKQLY QPLHYLTNI LKQWDQLR G+ED
Sbjct: 61 AMYQDYMKHIPIPSSRGSLIPFTSWMGLGRSIKQLYGQPLHYLTNILLKQWDQLRIGSED 120
Query: 118 EHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVFIDSI 168
E+ PLD ++HP KAE+T+WL+EE+HR TS H H+A LW DPM++ FIDSI
Sbjct: 121 EYTPLDDIIHPRKAESTIWLMEEIHRQTSSHFHIADLWKKDPMYHGFIDSI 171
>gi|51535316|dbj|BAD38576.1| unknown protein [Oryza sativa Japonica Group]
gi|51535714|dbj|BAD37732.1| unknown protein [Oryza sativa Japonica Group]
gi|215701196|dbj|BAG92620.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 173
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 120/168 (71%), Gaps = 2/168 (1%)
Query: 1 MKRPMPWGDQVDVISSDDSASDGDADNGLDGRQSSNDMTIDQPTKELTSEGSLFRRAEMY 60
MKR PW + ++V S D +SD D + G + N + TK +G+L R+AEMY
Sbjct: 1 MKRAAPWEEPLEVSSDDSLSSDSDDEAGKG--KGDNAFGLPNSTKAAAPDGALIRKAEMY 58
Query: 61 QEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNIHLKQWDQLRFGTEDEHK 120
QEYMK +P+P R S+IP T+W+GLG S+KQLY+QPLHYLTN+ LKQWDQ R G++DEH+
Sbjct: 59 QEYMKHIPVPAHRGSVIPCTTWLGLGRSVKQLYKQPLHYLTNVLLKQWDQQRVGSDDEHR 118
Query: 121 PLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVFIDSI 168
PLD+++HP KAEA +W+ EEVHRLT+ HLA LW S PM++ +ID +
Sbjct: 119 PLDAIIHPVKAEALIWITEEVHRLTTSSQHLASLWASAPMYHAYIDPV 166
>gi|30686741|ref|NP_188907.2| RNA-directed DNA methylation 1 protein [Arabidopsis thaliana]
gi|73921107|sp|Q9LUJ3.1|RDM1_ARATH RecName: Full=Protein RDM1; AltName: Full=Protein RNA-directed DNA
methylation 1
gi|9279686|dbj|BAB01243.1| unnamed protein product [Arabidopsis thaliana]
gi|332643143|gb|AEE76664.1| RNA-directed DNA methylation 1 protein [Arabidopsis thaliana]
Length = 163
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 92/154 (59%), Positives = 115/154 (74%), Gaps = 6/154 (3%)
Query: 15 SSDDSASDGDADNGLDGRQSSNDMTIDQPTKELTSEGSLFRRAEMYQEYMKQLPIPTQRS 74
S D +SD DA+ DG +D +++ EGSL RRAEMYQ+YMKQ+PIPT R
Sbjct: 12 SGDSGSSDVDAEIS-DGFSP-----LDTSHRDVADEGSLLRRAEMYQDYMKQVPIPTNRG 65
Query: 75 SIIPFTSWVGLGNSIKQLYEQPLHYLTNIHLKQWDQLRFGTEDEHKPLDSLVHPCKAEAT 134
S+IPFTSWVGL S+KQLY QPLHYLTN+ L++WDQ RFGT+ E + LDS++HP KAEAT
Sbjct: 66 SLIPFTSWVGLSISMKQLYGQPLHYLTNVLLQRWDQSRFGTDSEEQRLDSIIHPTKAEAT 125
Query: 135 VWLIEEVHRLTSCHHHLAKLWLSDPMHYVFIDSI 168
+WL+EE+HRLT H H+A LW SDPM++ FID I
Sbjct: 126 IWLVEEIHRLTPSHLHMALLWRSDPMYHSFIDPI 159
>gi|49259563|pdb|1VK5|A Chain A, X-Ray Structure Of Gene Product From Arabidopsis Thaliana
At3g22680
gi|150261463|pdb|2Q3T|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
Gene Product From Arabidopsis Thaliana At3g22680
Length = 157
Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 91/154 (59%), Positives = 114/154 (74%), Gaps = 6/154 (3%)
Query: 15 SSDDSASDGDADNGLDGRQSSNDMTIDQPTKELTSEGSLFRRAEMYQEYMKQLPIPTQRS 74
S D +SD DA+ S +D +++ EGSL RRAEMYQ+YMKQ+PIPT R
Sbjct: 6 SGDSGSSDVDAEI------SDGFSPLDTSHRDVADEGSLLRRAEMYQDYMKQVPIPTNRG 59
Query: 75 SIIPFTSWVGLGNSIKQLYEQPLHYLTNIHLKQWDQLRFGTEDEHKPLDSLVHPCKAEAT 134
S+IPFTSWVGL S+KQLY QPLHYLTN+ L++WDQ RFGT+ E + LDS++HP KAEAT
Sbjct: 60 SLIPFTSWVGLSISMKQLYGQPLHYLTNVLLQRWDQSRFGTDSEEQRLDSIIHPTKAEAT 119
Query: 135 VWLIEEVHRLTSCHHHLAKLWLSDPMHYVFIDSI 168
+WL+EE+HRLT H H+A LW SDPM++ FID I
Sbjct: 120 IWLVEEIHRLTPSHLHMALLWRSDPMYHSFIDPI 153
>gi|357480931|ref|XP_003610751.1| hypothetical protein MTR_5g006600 [Medicago truncatula]
gi|355512086|gb|AES93709.1| hypothetical protein MTR_5g006600 [Medicago truncatula]
Length = 369
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 82/129 (63%), Positives = 103/129 (79%)
Query: 40 IDQPTKELTSEGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHY 99
I P+ ++ S L RRA MYQ+YM+Q+PIP+ R S+IPFTSW+GLG SIK+LY QPLHY
Sbjct: 233 ISIPSIDINSSDVLIRRAAMYQDYMEQIPIPSSRGSVIPFTSWMGLGQSIKKLYGQPLHY 292
Query: 100 LTNIHLKQWDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDP 159
LTNI LKQWDQ+R G+EDE++ LD ++HPCKAEAT+WL+E+VHR S H HLA LW DP
Sbjct: 293 LTNIILKQWDQMRIGSEDEYRRLDDIIHPCKAEATIWLMEQVHRQASSHFHLANLWKKDP 352
Query: 160 MHYVFIDSI 168
M+ F+DSI
Sbjct: 353 MYNGFLDSI 361
>gi|293332853|ref|NP_001170520.1| uncharacterized protein LOC100384531 [Zea mays]
gi|238005816|gb|ACR33943.1| unknown [Zea mays]
gi|413943611|gb|AFW76260.1| hypothetical protein ZEAMMB73_028478 [Zea mays]
Length = 218
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 75/121 (61%), Positives = 98/121 (80%)
Query: 48 TSEGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNIHLKQ 107
T+EG+L RRAEMYQ+YMK++P+P R S+IPFTSW+GL S+KQLYEQPLHYLTN+ LK+
Sbjct: 91 TAEGALIRRAEMYQQYMKRIPVPAYRDSVIPFTSWLGLAGSLKQLYEQPLHYLTNVLLKK 150
Query: 108 WDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVFIDS 167
WDQ R G++DEH+ LD+++HP +AE VW EEVHRLT+ HLA LW SDPM++ +D
Sbjct: 151 WDQQRIGSDDEHRRLDAIIHPARAETLVWATEEVHRLTTSGQHLASLWASDPMYHAHVDP 210
Query: 168 I 168
+
Sbjct: 211 V 211
>gi|224510943|pdb|3GAN|A Chain A, Crystal Structure Of Gene Product From Arabidopsis
Thaliana At3g22680 With Bound Suramin
Length = 157
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/154 (57%), Positives = 109/154 (70%), Gaps = 6/154 (3%)
Query: 15 SSDDSASDGDADNGLDGRQSSNDMTIDQPTKELTSEGSLFRRAEMYQEYMKQLPIPTQRS 74
S D +SD DA+ S +D +++ EGSL RRAE YQ+Y KQ+PIPT R
Sbjct: 6 SGDSGSSDVDAEI------SDGFSPLDTSHRDVADEGSLLRRAEXYQDYXKQVPIPTNRG 59
Query: 75 SIIPFTSWVGLGNSIKQLYEQPLHYLTNIHLKQWDQLRFGTEDEHKPLDSLVHPCKAEAT 134
S+IPFTSWVGL S KQLY QPLHYLTN+ L++WDQ RFGT+ E + LDS++HP KAEAT
Sbjct: 60 SLIPFTSWVGLSISXKQLYGQPLHYLTNVLLQRWDQSRFGTDSEEQRLDSIIHPTKAEAT 119
Query: 135 VWLIEEVHRLTSCHHHLAKLWLSDPMHYVFIDSI 168
+WL+EE+HRLT H H A LW SDP ++ FID I
Sbjct: 120 IWLVEEIHRLTPSHLHXALLWRSDPXYHSFIDPI 153
>gi|388497526|gb|AFK36829.1| unknown [Lotus japonicus]
gi|388503924|gb|AFK40028.1| unknown [Lotus japonicus]
Length = 165
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/135 (59%), Positives = 101/135 (74%), Gaps = 1/135 (0%)
Query: 35 SNDMTIDQPTK-ELTSEGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLY 93
+N + + P+ ++ S L +RA MYQ+YMKQ+PIP+ R S+IPFTSW+GLG S+KQLY
Sbjct: 23 TNGIPLPIPSNSDIMSHDVLIKRAGMYQDYMKQIPIPSHRGSVIPFTSWMGLGRSLKQLY 82
Query: 94 EQPLHYLTNIHLKQWDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAK 153
QPLHYLTN+ LKQWDQ R G+ DE PLD ++HPCKAEA VWL EEVHR TS H +A
Sbjct: 83 GQPLHYLTNVLLKQWDQRRIGSADELTPLDDIIHPCKAEAMVWLAEEVHRKTSSHFQIAD 142
Query: 154 LWLSDPMHYVFIDSI 168
LW+ DP + F+DSI
Sbjct: 143 LWMLDPKYNAFLDSI 157
>gi|326516968|dbj|BAJ96476.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 174
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 123/169 (72%), Gaps = 3/169 (1%)
Query: 1 MKRPMPWGDQVDVISSDDSASDGDADNGLDGRQSSNDMTIDQPTKELT-SEGSLFRRAEM 59
MKR P + V++ S DD++SD D + G +G+ N + +K ++G+L RRAEM
Sbjct: 1 MKRAAPSEEPVELSSGDDASSDSDDEAG-NGK-GENSFRLPMSSKSTAPAKGALIRRAEM 58
Query: 60 YQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNIHLKQWDQLRFGTEDEH 119
YQEYMK +PIP SS+IP TSW+GLG S+KQLYEQPLHYLTNI L+QWDQ R G+++EH
Sbjct: 59 YQEYMKHIPIPDHCSSLIPSTSWLGLGRSVKQLYEQPLHYLTNILLRQWDQQRVGSDNEH 118
Query: 120 KPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVFIDSI 168
+PLD+++HP KA+A +W EE+HRLT+ +L KLW DPM++ +ID +
Sbjct: 119 QPLDAIIHPMKAQALIWATEEIHRLTTSSDYLGKLWAKDPMYHAYIDPV 167
>gi|224098766|ref|XP_002311260.1| predicted protein [Populus trichocarpa]
gi|222851080|gb|EEE88627.1| predicted protein [Populus trichocarpa]
Length = 194
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 97/147 (65%), Gaps = 3/147 (2%)
Query: 22 DGDADNGLDGRQSSNDMTIDQPTKELTSEGS-LFRRAEMYQEYMKQLPIPTQRSSI-IPF 79
DG +N + + D + K L E + R+AE+YQEYMKQ+PIP+ + I +
Sbjct: 44 DG-KENCMYEKNKKRDTVNEDHMKSLMDESDIMMRKAEIYQEYMKQIPIPSSTCGLPISY 102
Query: 80 TSWVGLGNSIKQLYEQPLHYLTNIHLKQWDQLRFGTEDEHKPLDSLVHPCKAEATVWLIE 139
+W L +IKQ+Y QPLHYLTN LKQWDQLR GT+DE KPLD+++ P +A AT+W +E
Sbjct: 103 MTWQELARTIKQVYGQPLHYLTNKLLKQWDQLRIGTKDESKPLDNIIDPNRAVATIWGME 162
Query: 140 EVHRLTSCHHHLAKLWLSDPMHYVFID 166
E HR S H HLA+LWLSDP+ + +D
Sbjct: 163 EFHRQCSSHQHLARLWLSDPLQHDSLD 189
>gi|225449533|ref|XP_002278910.1| PREDICTED: protein RDM1-like [Vitis vinifera]
Length = 141
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 88/120 (73%), Gaps = 2/120 (1%)
Query: 51 GSLFR-RAEMYQEYMKQLPIPTQRSSI-IPFTSWVGLGNSIKQLYEQPLHYLTNIHLKQW 108
G++ R A YQ+YMKQLPIP++R IP +W LGNS+KQLY QPLHYLTN+ L++W
Sbjct: 2 GAVLRPYANAYQQYMKQLPIPSKRCETHIPNITWRELGNSMKQLYGQPLHYLTNLMLQRW 61
Query: 109 DQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVFIDSI 168
D R G+E+EH+P+ S++ P AE+T+W++EE HR ++ H+A LW++DP + FID I
Sbjct: 62 DDSRIGSENEHRPMHSIIEPSVAESTIWVVEEFHRRSTSAQHVATLWINDPKYSAFIDPI 121
>gi|147800414|emb|CAN62046.1| hypothetical protein VITISV_026043 [Vitis vinifera]
Length = 156
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 87/121 (71%), Gaps = 2/121 (1%)
Query: 50 EGSLFR-RAEMYQEYMKQLPIPTQRSSI-IPFTSWVGLGNSIKQLYEQPLHYLTNIHLKQ 107
E ++ R A YQ+YMKQLPIP++ IP +W LGNS+KQLY QPLHYLTN+ L++
Sbjct: 16 ESAVLRPYANAYQQYMKQLPIPSKHCETHIPNITWRELGNSMKQLYGQPLHYLTNLMLQR 75
Query: 108 WDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVFIDS 167
WD R G+E+EHKP+ S++ P AE+T+W++EE HR ++ H+A LW++DP + FID
Sbjct: 76 WDDSRIGSENEHKPMHSIIEPSVAESTIWVVEEFHRRSTSTQHVATLWINDPKYSAFIDP 135
Query: 168 I 168
I
Sbjct: 136 I 136
>gi|255547486|ref|XP_002514800.1| conserved hypothetical protein [Ricinus communis]
gi|223545851|gb|EEF47354.1| conserved hypothetical protein [Ricinus communis]
Length = 194
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 88/141 (62%), Gaps = 5/141 (3%)
Query: 26 DNGLDGRQSSNDMTIDQPTKELTSEGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGL 85
+N DG+ D E SE + + AE YQ+ MK +PIP +S I F +W GL
Sbjct: 51 ENVADGKNGQ-----DMKALEEESEMKIRKAAEKYQQGMKLIPIPPSHASPILFITWQGL 105
Query: 86 GNSIKQLYEQPLHYLTNIHLKQWDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLT 145
SIKQ YEQPLHYLT LK+WDQ R G+ +E KPL+ ++ P KAEAT+W++E HR
Sbjct: 106 ARSIKQKYEQPLHYLTMKLLKEWDQSRLGSVEERKPLEDIIDPVKAEATIWVVEHFHRQC 165
Query: 146 SCHHHLAKLWLSDPMHYVFID 166
S HL+KLWLSDP + FID
Sbjct: 166 SSPGHLSKLWLSDPTYQDFID 186
>gi|30102560|gb|AAP21198.1| At3g22680 [Arabidopsis thaliana]
Length = 121
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/115 (56%), Positives = 82/115 (71%), Gaps = 6/115 (5%)
Query: 15 SSDDSASDGDADNGLDGRQSSNDMTIDQPTKELTSEGSLFRRAEMYQEYMKQLPIPTQRS 74
S D +SD DA+ S +D +++ EGSL RRAEMYQ+YMKQ+PIPT R
Sbjct: 12 SGDSGSSDVDAEI------SDGFSPLDTSHRDVADEGSLLRRAEMYQDYMKQVPIPTNRG 65
Query: 75 SIIPFTSWVGLGNSIKQLYEQPLHYLTNIHLKQWDQLRFGTEDEHKPLDSLVHPC 129
S+IPFTSWVGL S+KQLY QPLHYLTN+ L++WDQ RFGT+ E + LDS++HP
Sbjct: 66 SLIPFTSWVGLSISMKQLYGQPLHYLTNVLLQRWDQSRFGTDSEEQRLDSIIHPT 120
>gi|357480927|ref|XP_003610749.1| DNA polymerase delta subunit [Medicago truncatula]
gi|355512084|gb|AES93707.1| DNA polymerase delta subunit [Medicago truncatula]
Length = 171
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 68/123 (55%), Gaps = 30/123 (24%)
Query: 47 LTSEGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNIHLK 106
L ++ + RRA MYQ YM+Q+PI T R S+IP T W+GLG SIK+LY QPLHYLTNI LK
Sbjct: 70 LYADVLIIRRAAMYQNYMEQIPILTSRGSVIPSTLWMGLGKSIKKLYTQPLHYLTNIILK 129
Query: 107 QWDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMH-YVFI 165
+ D + +HR S H HLA LW DP++ F+
Sbjct: 130 RLDNI-----------------------------IHRQASSHFHLANLWKMDPLYNNGFV 160
Query: 166 DSI 168
DSI
Sbjct: 161 DSI 163
>gi|414584784|tpg|DAA35355.1| TPA: hypothetical protein ZEAMMB73_651746 [Zea mays]
Length = 297
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 21/91 (23%)
Query: 67 LPIPTQRSSIIPFTSWVGLGNSIKQLY-------------------EQPLHYLTNIHLKQ 107
+P+P S+ PFT W+GL S+KQ E+P HYLTN+ LK
Sbjct: 92 IPVPAYCDSVTPFTLWLGLAGSLKQYLTNVLLKTSTSLRGHLGPKSEEPSHYLTNVLLKC 151
Query: 108 WDQ--LRFGTEDEHKPLDSLVHPCKAEATVW 136
LR G++ EH+ L+ ++HP +AE +W
Sbjct: 152 GTNKGLRLGSDVEHRHLNDIIHPSRAETLIW 182
>gi|413924999|gb|AFW64931.1| hypothetical protein ZEAMMB73_750051 [Zea mays]
Length = 174
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 94 EQPLHYLTNIHLKQWDQ--LRFGTEDEHKPLDSLVHPCKAEATVW 136
E+P HYLTN+ LK LR G++ EH+ LD+++HP + E +W
Sbjct: 122 EEPSHYLTNVLLKCGTNKGLRLGSDVEHRHLDAIIHPSRVETLIW 166
>gi|303236539|ref|ZP_07323124.1| putative cystathionine beta-lyase PatB [Prevotella disiens
FB035-09AN]
gi|302483287|gb|EFL46297.1| putative cystathionine beta-lyase PatB [Prevotella disiens
FB035-09AN]
Length = 389
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 9/108 (8%)
Query: 85 LGNSIKQLYEQPLHYLTNIHLKQWDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRL 144
+ N Q+ E PL N + W+ DE L L +P VW EE+ R+
Sbjct: 125 IRNQGTQVLENPLKREGNTFVVDWEDFEAKCADEKTTLFLLCNPHNPAGRVWTKEELARM 184
Query: 145 TS-CHHHLAKLWLSDPMH-------YVFIDSITLNSPKSPDSTKSSSP 184
C H K+ +SD +H Y F T+N +S +SP
Sbjct: 185 NEICMRHDVKV-ISDEIHCELIMPDYTFTPFATVNEDCKRNSVIFNSP 231
>gi|440789318|ref|YP_007349028.1| proximal tail sheath stabilization [Serratia phage phiMAM1]
gi|425702357|gb|AFX93517.1| proximal tail sheath stabilization [Serratia phage phiMAM1]
Length = 241
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 38 MTIDQPTKELTSEGSLFRRAEMYQEYMKQLPIPTQRSSI-IPFTSWVGLGNSIKQLYEQP 96
MT+ P ++ GS+FR E++ M +L I T+R + +P T+ VG N + + QP
Sbjct: 1 MTMAAPFEKYVYRGSIFRYLELFSVVMSRLKIDTERGLMQVPITAAVGRRNDLNR--NQP 58
Query: 97 LHYL 100
++ L
Sbjct: 59 VNAL 62
>gi|223890058|dbj|BAH22850.1| L-cysteine desulfhydrase [Prevotella intermedia ATCC 25611]
Length = 390
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 9/102 (8%)
Query: 91 QLYEQPLHYLTNIHLKQWDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTS-CHH 149
++ E PL N ++ WD D+ L L +P VW +E+ R+ C
Sbjct: 131 RVLESPLKREGNTYVVDWDDFEAKCADKKTTLFLLCNPHNPAGRVWSKDELARMNEICMR 190
Query: 150 HLAKLWLSDPMH-------YVFIDSITLNSPKSPDSTKSSSP 184
H K+ +SD +H YVF T+N+ +S +SP
Sbjct: 191 HDVKV-ISDEIHCELIMPGYVFTPFATVNADCQRNSVVFNSP 231
>gi|327307204|ref|XP_003238293.1| hypothetical protein TERG_00282 [Trichophyton rubrum CBS 118892]
gi|326458549|gb|EGD84002.1| hypothetical protein TERG_00282 [Trichophyton rubrum CBS 118892]
Length = 995
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 44 TKELTSEGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNI 103
T L + + E+Y +K+L P +R ++I +W +G + + LHYL +I
Sbjct: 665 TDSLIRLATATKNRELYSNTIKRLERPLRRQTLIALLNW-RIGECDSKGAVELLHYLRDI 723
Query: 104 HLKQWD 109
L QWD
Sbjct: 724 RLSQWD 729
>gi|302663681|ref|XP_003023479.1| conserved hypothetical protein [Trichophyton verrucosum HKI 0517]
gi|291187480|gb|EFE42861.1| conserved hypothetical protein [Trichophyton verrucosum HKI 0517]
Length = 984
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 44 TKELTSEGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNI 103
T L + + E+Y +K+L P +R ++I +W +G + + LHYL +I
Sbjct: 663 TDSLIRLATATKNRELYSNTIKRLERPLRRQTLIALLNW-RIGECDSKGAIELLHYLRDI 721
Query: 104 HLKQWD 109
L QWD
Sbjct: 722 RLSQWD 727
>gi|302508199|ref|XP_003016060.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371]
gi|291179629|gb|EFE35415.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371]
Length = 965
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 44 TKELTSEGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNI 103
T L + + E+Y +K+L P +R ++I +W +G + + LHYL +I
Sbjct: 663 TDSLIRLATATKNRELYSNTIKRLERPLRRQTLIALLNW-RIGECDSKGAIELLHYLRDI 721
Query: 104 HLKQWD 109
L QWD
Sbjct: 722 RLSQWD 727
>gi|340353358|ref|ZP_08676178.1| cystathione beta-lyase [Prevotella pallens ATCC 700821]
gi|339610374|gb|EGQ15227.1| cystathione beta-lyase [Prevotella pallens ATCC 700821]
Length = 389
Score = 36.2 bits (82), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 12/132 (9%)
Query: 64 MKQLPIPTQRSSI---IPFTSWVGLGNSIKQLYEQPLHYLTNIHLKQWDQLRFGTEDEHK 120
+K L +P + I + + + N Q+ E PL N ++ W DE
Sbjct: 101 IKALAMPGENVLIQTPVYNCFYSCIRNQGMQILENPLKREGNTYVVDWHDFEKKCSDEKT 160
Query: 121 PLDSLVHPCKAEATVWLIEEVHRLTS-CHHHLAKLWLSDPMH-------YVFIDSITLNS 172
L L +P VW +E+ ++ C H K+ +SD +H Y F T+NS
Sbjct: 161 TLFLLCNPHNPAGRVWTKDELAQMNDICMRHNVKV-ISDEIHCELIMPGYTFTPFATVNS 219
Query: 173 PKSPDSTKSSSP 184
+S +SP
Sbjct: 220 DCLANSVVCNSP 231
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.131 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,171,002,697
Number of Sequences: 23463169
Number of extensions: 126226738
Number of successful extensions: 394055
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 394013
Number of HSP's gapped (non-prelim): 34
length of query: 187
length of database: 8,064,228,071
effective HSP length: 134
effective length of query: 53
effective length of database: 9,215,130,721
effective search space: 488401928213
effective search space used: 488401928213
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 72 (32.3 bits)