BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029829
(187 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q42553|IDI2_ARATH Isopentenyl-diphosphate Delta-isomerase II, chloroplastic
OS=Arabidopsis thaliana GN=IPP2 PE=2 SV=1
Length = 284
Score = 317 bits (813), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 152/178 (85%), Positives = 162/178 (91%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FS+ F S + QQRS TKVTFPLVWTNTCCSHPLYRESELI++NALGVRNAAQRKLL
Sbjct: 107 FSVFLFNSKYELLLQQRSNTKVTFPLVWTNTCCSHPLYRESELIQDNALGVRNAAQRKLL 166
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKY 128
DELGI AEDVPVDEFTPLGR+LYKAPSDGKWGEHELDYLLFIVRDV V PNPDEVAE KY
Sbjct: 167 DELGIVAEDVPVDEFTPLGRMLYKAPSDGKWGEHELDYLLFIVRDVKVQPNPDEVAEIKY 226
Query: 129 VNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 186
V+RE+LKEL++KADAGEEGLKLSPWFRLVVDNFL KWWDH+EKGTL E IDMKTIHKL
Sbjct: 227 VSREELKELVKKADAGEEGLKLSPWFRLVVDNFLMKWWDHVEKGTLVEAIDMKTIHKL 284
>sp|Q39471|IDI2_CLABR Isopentenyl-diphosphate Delta-isomerase II OS=Clarkia breweri
GN=IPI2 PE=3 SV=2
Length = 286
Score = 317 bits (811), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 152/178 (85%), Positives = 163/178 (91%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FS+ F S + QQRS TKVTFPLVWTNTCCSHPLYRESELI+EN LGVRNAAQRKLL
Sbjct: 109 FSVFLFNSKFELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIDENNLGVRNAAQRKLL 168
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKY 128
DELGI AEDVPVDEFTPL R+LYKAPSDGKWGEHELDYLLFIVRDV+V+PNPDEVAE KY
Sbjct: 169 DELGIPAEDVPVDEFTPLSRMLYKAPSDGKWGEHELDYLLFIVRDVAVHPNPDEVAEIKY 228
Query: 129 VNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 186
VNREQLKELL+KADAGEEGLKLSPWFRLVVDNFL KWWDH+EKGTL+E +DMK+IHKL
Sbjct: 229 VNREQLKELLKKADAGEEGLKLSPWFRLVVDNFLPKWWDHVEKGTLSEAVDMKSIHKL 286
>sp|O48964|IDI1_CAMAC Isopentenyl-diphosphate Delta-isomerase I OS=Camptotheca acuminata
GN=IPI1 PE=2 SV=1
Length = 235
Score = 317 bits (811), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 151/178 (84%), Positives = 162/178 (91%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FS+ F S + QQRS TKVTFPLVWTNTCCSHPLYRESELI+ENALG RNAAQRKLL
Sbjct: 57 FSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIKENALGARNAAQRKLL 116
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKY 128
DELGI AEDVPVD+F PLGRILYKAPSDGKWGEHELDYLLFIVRDV+VNPNPDEVA+ KY
Sbjct: 117 DELGIPAEDVPVDQFIPLGRILYKAPSDGKWGEHELDYLLFIVRDVNVNPNPDEVADIKY 176
Query: 129 VNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 186
V R+QLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDH+EKGT++E DMK+IHKL
Sbjct: 177 VTRDQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTMHEAADMKSIHKL 234
>sp|O48965|IDI2_CAMAC Isopentenyl-diphosphate Delta-isomerase II OS=Camptotheca acuminata
GN=IPI2 PE=2 SV=1
Length = 309
Score = 313 bits (801), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 162/179 (90%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FS+ F S + QQRS TKVTFPLVWTNTCCSHP YRESEL++ENALGVRNAAQRKLL
Sbjct: 131 FSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPRYRESELVDENALGVRNAAQRKLL 190
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKY 128
DELGI AEDVPVD+F PLGR+LYKAPSDGKWGEHELDYLLFI+RDV+V+PNPDEVA+ KY
Sbjct: 191 DELGIPAEDVPVDQFIPLGRMLYKAPSDGKWGEHELDYLLFIIRDVNVHPNPDEVADVKY 250
Query: 129 VNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKLT 187
VN++QLK+LLRK DAGEEGLKLSPWFRLVV+NFLFKWWDH+EKGTL + DMKTIHKLT
Sbjct: 251 VNQDQLKDLLRKVDAGEEGLKLSPWFRLVVENFLFKWWDHVEKGTLQDATDMKTIHKLT 309
>sp|Q39664|IDI2_CLAXA Isopentenyl-diphosphate Delta-isomerase II OS=Clarkia xantiana
GN=IPI2 PE=3 SV=1
Length = 290
Score = 311 bits (798), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 149/178 (83%), Positives = 161/178 (90%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
F++ F S + QQRS TKVTFPLVWTNTCCSHPLYRESELI+EN LGVRNAAQRKLL
Sbjct: 113 FTVFLFNSKFELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIDENNLGVRNAAQRKLL 172
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKY 128
DELGI AEDVPVDEFTP+ R+LYKAPSDGKWGEHELDYLLFIVRDV ++PNPDEVA+ KY
Sbjct: 173 DELGIPAEDVPVDEFTPVSRMLYKAPSDGKWGEHELDYLLFIVRDVGIHPNPDEVADIKY 232
Query: 129 VNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 186
VNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL KWWDH+EKGTL+E +DMKTIH L
Sbjct: 233 VNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLPKWWDHVEKGTLSEAVDMKTIHNL 290
>sp|Q38929|IDI1_ARATH Isopentenyl-diphosphate Delta-isomerase I, chloroplastic
OS=Arabidopsis thaliana GN=IPP1 PE=2 SV=3
Length = 291
Score = 308 bits (789), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 145/178 (81%), Positives = 158/178 (88%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FS+ F S + QQRS TKVTFPLVWTNTCCSHPLYRESELIEEN LGVRNAAQRKL
Sbjct: 114 FSVFLFNSKYELLLQQRSKTKVTFPLVWTNTCCSHPLYRESELIEENVLGVRNAAQRKLF 173
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKY 128
DELGI AEDVPVDEFTPLGR+LYKAPSDGKWGEHE+DYLLFIVRDV + PNPDEVAE KY
Sbjct: 174 DELGIVAEDVPVDEFTPLGRMLYKAPSDGKWGEHEVDYLLFIVRDVKLQPNPDEVAEIKY 233
Query: 129 VNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 186
V+RE+LKEL++KADAG+E +KLSPWFRLVVDNFL KWWDH+EKGT+ E DMKTIHKL
Sbjct: 234 VSREELKELVKKADAGDEAVKLSPWFRLVVDNFLMKWWDHVEKGTITEAADMKTIHKL 291
>sp|Q39472|IDI1_CLABR Isopentenyl-diphosphate Delta-isomerase I OS=Clarkia breweri
GN=IPI1 PE=2 SV=2
Length = 287
Score = 306 bits (784), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 159/178 (89%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FS+ F S + QQRS TKVTFPLVWTNTCCSHPLYRESELI+EN LGVRNAAQRKLL
Sbjct: 110 FSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIDENCLGVRNAAQRKLL 169
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKY 128
DELGI AED+PVD+F PL RILYKAPSDGKWGEHELDYLLFI+RDV+++PNPDEVAE KY
Sbjct: 170 DELGIPAEDLPVDQFIPLSRILYKAPSDGKWGEHELDYLLFIIRDVNLDPNPDEVAEVKY 229
Query: 129 VNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 186
+NR+ LKELLRKADA EEG+KLSPWFRLVVDNFLFKWWDH+EKG+L + DMKTIHKL
Sbjct: 230 MNRDDLKELLRKADAEEEGVKLSPWFRLVVDNFLFKWWDHVEKGSLKDAADMKTIHKL 287
>sp|O35586|IDI1_MESAU Isopentenyl-diphosphate Delta-isomerase 1 OS=Mesocricetus auratus
GN=IDI1 PE=2 SV=1
Length = 227
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 132/178 (74%), Gaps = 4/178 (2%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FS+ F + + + QQRS K+TFP +TN+CCSHPL EL E +A+GV+ AAQR+L
Sbjct: 54 FSVFLFNTENKLLLQQRSDAKITFPGCFTNSCCSHPLSNPGELEENDAIGVKRAAQRRLK 113
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKY 128
ELGI E+V +E L RI YKA SDG WGEHE+DY+LF+ ++V++NP+P+E+ Y Y
Sbjct: 114 AELGIPLEEVDPNEMHYLTRIYYKAQSDGIWGEHEIDYILFLKKNVTLNPDPNEIKSYCY 173
Query: 129 VNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 186
V++E+LKEL++KA +GE +KL+PWF+++VD FLFKWWD+L L++ +D + IH++
Sbjct: 174 VSKEELKELVKKAASGE--VKLTPWFKIIVDTFLFKWWDNL--NHLSQFVDHEKIHRM 227
>sp|Q1LZ95|IDI1_BOVIN Isopentenyl-diphosphate Delta-isomerase 1 OS=Bos taurus GN=IDI1
PE=2 SV=2
Length = 227
Score = 189 bits (481), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 128/178 (71%), Gaps = 4/178 (2%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FS+ F + + + QQRS K+TFP +TNTCCSHPL SEL E +A+GVR AAQR+L
Sbjct: 54 FSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPSELEENDAIGVRRAAQRRLK 113
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKY 128
ELGI E+VP +E L RI YKA SD WGEHE+DY+L + ++V++NP+P+E+ Y Y
Sbjct: 114 AELGIPMEEVPPEEINYLTRIHYKAQSDSIWGEHEIDYILLVKKNVTLNPDPNEIKSYCY 173
Query: 129 VNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 186
V +E+L+EL+ KA GE +K++PWF+++ D FLFKWWD+L + LN +D + IH++
Sbjct: 174 VTKEELEELIGKAAHGE--IKITPWFQIIADTFLFKWWDNLNR--LNLFVDHEKIHRM 227
>sp|P58044|IDI1_MOUSE Isopentenyl-diphosphate Delta-isomerase 1 OS=Mus musculus GN=Idi1
PE=2 SV=1
Length = 227
Score = 189 bits (479), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 131/178 (73%), Gaps = 4/178 (2%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FS+ F + + + QQRS K+TFP +TN+CCSHPL EL E NA+GV+ AA+R+L
Sbjct: 54 FSVFLFNTENKLLLQQRSDAKITFPGCFTNSCCSHPLSNPGELEENNAIGVKRAAKRRLK 113
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKY 128
ELGI E+V ++E L RI YKA SDG WGEHE+DY+LF+ ++V++NP+P+E+ Y Y
Sbjct: 114 AELGIPLEEVDLNEMDYLTRIYYKAQSDGIWGEHEVDYILFLRKNVTLNPDPNEIKSYCY 173
Query: 129 VNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 186
V++E+++E+L+KA +GE +KL+PWF+++ D FLFKWWD+L L+ +D + IH+L
Sbjct: 174 VSKEEVREILKKAASGE--IKLTPWFKIIADTFLFKWWDNL--NHLSPFVDHEKIHRL 227
>sp|O35760|IDI1_RAT Isopentenyl-diphosphate Delta-isomerase 1 OS=Rattus norvegicus
GN=Idi1 PE=2 SV=2
Length = 227
Score = 187 bits (476), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 129/178 (72%), Gaps = 4/178 (2%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FS+ F + + + QQRS K+TFP +TN+CCSHPL EL E +A+GV+ AAQR+L
Sbjct: 54 FSVFLFNTENKLLLQQRSDAKITFPGCFTNSCCSHPLNNPGELEENDAMGVKRAAQRRLK 113
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKY 128
ELGI E+V ++E L RI YKA SDG WGEHE+DY+LF+ ++V++NP+P+E+ Y Y
Sbjct: 114 AELGIPLEEVDLNEMNYLTRIYYKAQSDGIWGEHEIDYILFLRKNVTLNPDPNEIKSYCY 173
Query: 129 VNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 186
V++E+LKE+L+K GE +KL+PWF+++ D FLFKWWD+L L+ +D + IH++
Sbjct: 174 VSKEELKEILKKEARGE--IKLTPWFKIIADAFLFKWWDNL--NHLSPFVDHEKIHRM 227
>sp|Q4R4W5|IDI1_MACFA Isopentenyl-diphosphate Delta-isomerase 1 OS=Macaca fascicularis
GN=IDI1 PE=2 SV=2
Length = 227
Score = 177 bits (449), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 131/178 (73%), Gaps = 4/178 (2%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FS+ F + + + QQRS K+TFP +TNTCCSHPL EL E +ALGVR AAQR+L
Sbjct: 54 FSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPGELEENDALGVRRAAQRRLK 113
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKY 128
ELGI E+VP +E L RI YKA SDG WGEHE+DY+LF+ ++V++NP+P+E+ + Y
Sbjct: 114 AELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILFVRKNVTLNPDPNEIKSFCY 173
Query: 129 VNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 186
V++E+LKELL+KA GE +K++PWF+++ + FLFKWWD+L LN+ +D + IH++
Sbjct: 174 VSKEELKELLKKAANGE--IKITPWFQIIAETFLFKWWDNL--NHLNQFVDHEKIHRM 227
>sp|Q13907|IDI1_HUMAN Isopentenyl-diphosphate Delta-isomerase 1 OS=Homo sapiens GN=IDI1
PE=1 SV=2
Length = 227
Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 131/178 (73%), Gaps = 4/178 (2%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FS+ F + + + QQRS K+TFP +TNTCCSHPL +EL E +ALGVR AAQR+L
Sbjct: 54 FSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLK 113
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKY 128
ELGI E+VP +E L RI YKA SDG WGEHE+DY+L + ++V++NP+P+E+ Y Y
Sbjct: 114 AELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRKNVTLNPDPNEIKSYCY 173
Query: 129 VNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 186
V++E+LKELL+KA +GE +K++PWF+++ FLFKWWD+L LN+ +D + I+++
Sbjct: 174 VSKEELKELLKKAASGE--IKITPWFKIIAATFLFKWWDNL--NHLNQFVDHEKIYRM 227
>sp|Q5R8R6|IDI1_PONAB Isopentenyl-diphosphate Delta-isomerase 1 OS=Pongo abelii GN=IDI1
PE=2 SV=2
Length = 227
Score = 173 bits (438), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 130/178 (73%), Gaps = 4/178 (2%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FS+ F + + + QQRS K+T P +TNTCCSHPL EL E +ALGVR AAQR+L
Sbjct: 54 FSVFLFNTENKLLLQQRSDAKITLPGCFTNTCCSHPLSNPGELEENDALGVRRAAQRRLK 113
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKY 128
ELGI E+VP +E L RI YKA SDG WGEHE+DY+L + ++V++NP+P+E+ Y Y
Sbjct: 114 AELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRKNVTLNPDPNEIKSYCY 173
Query: 129 VNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 186
V++E+LKELL+KA +GE +K++PWF+++ + FLFKWWD+L LN+ +D + I+++
Sbjct: 174 VSKEELKELLKKAASGE--IKITPWFKIIAETFLFKWWDNL--NHLNQFVDHEKIYRI 227
>sp|Q10132|IDI1_SCHPO Isopentenyl-diphosphate Delta-isomerase OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=idi1 PE=2 SV=2
Length = 229
Score = 159 bits (403), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 106/169 (62%), Gaps = 11/169 (6%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESE---LIEENALGVRNAAQR 65
FS+ F + + QQR+ K+TFP +WTNTCCSHPL E + E GV+NAAQR
Sbjct: 57 FSMFIFDEQNRLLLQQRAEEKITFPSLWTNTCCSHPLDVAGERGNTLPEAVEGVKNAAQR 116
Query: 66 KLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAE 125
KL ELGI A+ +P D+F L RI Y APS G WGEHE+DY+LF V ++ NP+EV
Sbjct: 117 KLFHELGIQAKYIPKDKFQFLTRIHYLAPSTGAWGEHEIDYILFFKGKVELDINPNEVQA 176
Query: 126 YKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWW---DHLEK 171
YKYV E+LKE+ G +PWF+L+ ++F+FKWW DH K
Sbjct: 177 YKYVTMEELKEMFSDPQYG-----FTPWFKLICEHFMFKWWQDVDHASK 220
>sp|O42641|IDI1_PHARH Isopentenyl-diphosphate Delta-isomerase OS=Phaffia rhodozyma GN=IDI
PE=3 SV=1
Length = 251
Score = 156 bits (395), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 111/185 (60%), Gaps = 15/185 (8%)
Query: 9 FSILGF-VSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKL 67
FS+ F S + Q+R+ K+TFP +WTNTCCSHPL + E+ EEN +GVR AA RKL
Sbjct: 69 FSVFLFRPSDGALLLQRRADEKITFPGMWTNTCCSHPLSIKGEVKEENQIGVRRAASRKL 128
Query: 68 LDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYK 127
ELG+ P D FT L RI Y APSDG WGEHE+DY+LF NP+EV++ +
Sbjct: 129 EHELGVPTSSTPPDSFTYLTRIHYLAPSDGLWGEHEIDYILFSTTPTEHTGNPNEVSDTR 188
Query: 128 YVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHL-----EKGTLNEVIDMKT 182
YV + +L+ + +E +PWF+L+ +FLF WWD L EKG +D K+
Sbjct: 189 YVTKPELQAMFE-----DESNSFTPWFKLIARDFLFGWWDQLLARRNEKGE----VDAKS 239
Query: 183 IHKLT 187
+ L+
Sbjct: 240 LEDLS 244
>sp|Q9NH02|IDI_DICDI Isopentenyl-diphosphate Delta-isomerase OS=Dictyostelium discoideum
GN=ipi PE=2 SV=1
Length = 239
Score = 151 bits (382), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 115/165 (69%), Gaps = 6/165 (3%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLY-RESELIEENALGVRNAAQRKL 67
FSI F + QQR+ K+TFP WTNT CSHPL+ SEL+EENA GV+ AA+RKL
Sbjct: 61 FSIFLFNGEGKLLLQQRALEKITFPGYWTNTVCSHPLWIVGSELVEENAQGVKIAAKRKL 120
Query: 68 LDELGICAEDVPVDEFTPLGRILYKAPS--DGKWGEHELDYLLFIVRD-VSVNPNPDEVA 124
ELG+ + V +D+FT + +I YK+ S D +WGEHE+D++L + +D +++N P+EV
Sbjct: 121 NHELGVPLDQVNIDDFTFMTKIHYKSESKEDPQWGEHEIDHILIMQKDGITINAEPNEVM 180
Query: 125 EYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHL 169
+YKYV++E+L +L + D G+ +K++PWFRL+ N L WW++L
Sbjct: 181 DYKYVSQEELDQLFKDEDEGK--VKVTPWFRLIALNHLKPWWNNL 223
>sp|Q8BFZ6|IDI2_MOUSE Isopentenyl-diphosphate Delta-isomerase 2 OS=Mus musculus GN=Idi2
PE=2 SV=1
Length = 227
Score = 144 bits (362), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FS++ F + + QQR+ K TFP +T++C SHPLY EL E++ALGVR AA R+L
Sbjct: 54 FSVVLFNMKNELLVQQRADAKYTFPGHFTDSCSSHPLYVPEELEEKDALGVRRAALRRLQ 113
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKY 128
ELGI + + + + + R +K SD WGEHE+ YLL + +D+ +NP+ EV Y
Sbjct: 114 AELGISQDQISIKDIIFMTRKYHKCQSDAIWGEHEIGYLLLVRKDLMLNPDTREVRRCCY 173
Query: 129 VNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLE 170
++++ ++ELL + GEE K++PWFR +V++FLF WW HLE
Sbjct: 174 MSQKDVQELLDREARGEE--KITPWFRSMVEDFLFSWWPHLE 213
>sp|Q9BXS1|IDI2_HUMAN Isopentenyl-diphosphate Delta-isomerase 2 OS=Homo sapiens GN=IDI2
PE=1 SV=1
Length = 227
Score = 140 bits (352), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 118/178 (66%), Gaps = 4/178 (2%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FS++ F + + + QQRS TKVTFP +T++C SHPLY +EL E++A+GVR AAQR+L
Sbjct: 54 FSVVLFNTKNRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQ 113
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKY 128
ELGI E + ++ + +KA SD WGEHE+ YLL + ++V++NP+P E Y
Sbjct: 114 AELGIPGEQISPEDIVFMTIYHHKAKSDRIWGEHEICYLLLVRKNVTLNPDPSETKSILY 173
Query: 129 VNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 186
+++E+L ELL + GE +K++PW R + + FL++WW HL+ T +++ IH++
Sbjct: 174 LSQEELWELLEREARGE--VKVTPWLRTIAERFLYRWWPHLDDVT--PFVELHKIHRV 227
>sp|P15496|IDI1_YEAST Isopentenyl-diphosphate Delta-isomerase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=IDI1 PE=1 SV=2
Length = 288
Score = 134 bits (336), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 112/188 (59%), Gaps = 17/188 (9%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESEL-----IEENALGVRNAA 63
FS+ F + QQR+ K+TFP +WTNTCCSHPL + EL +++ G AA
Sbjct: 107 FSVFIFNEQGELLLQQRATEKITFPDLWTNTCCSHPLCIDDELGLKGKLDDKIKGAITAA 166
Query: 64 QRKLLDELGICAEDVPV-DEFTPLGRILYKAPSDGKWGEHELDYLLF----IVRDVSVNP 118
RKL ELGI ++ +F L RI Y APS+ WGEHE+DY+LF +++VNP
Sbjct: 167 VRKLDHELGIPEDETKTRGKFHFLNRIHYMAPSNEPWGEHEIDYILFYKINAKENLTVNP 226
Query: 119 NPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVI 178
N +EV ++K+V+ LK + + K +PWF+++ +N+LF WW+ L+ L+EV
Sbjct: 227 NVNEVRDFKWVSPNDLKTMF-----ADPSYKFTPWFKIICENYLFNWWEQLDD--LSEVE 279
Query: 179 DMKTIHKL 186
+ + IH++
Sbjct: 280 NDRQIHRM 287
>sp|Q5YYB6|IDI_NOCFA Isopentenyl-diphosphate Delta-isomerase OS=Nocardia farcinica
(strain IFM 10152) GN=idi PE=3 SV=1
Length = 175
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 75/153 (49%), Gaps = 23/153 (15%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FS+L F + + QQR+ K FPL+W NTCC HP ES V AA +L
Sbjct: 32 FSVLLFDTAGRVLLQQRAAVKTRFPLLWANTCCGHPAPGES---------VEAAAATRLA 82
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWG--EHELDYLLFIVRDVSVNPNPDEVAEY 126
+ELG+ A T +G Y+A +D G EHE D++L D + +P+P EVA
Sbjct: 83 EELGVAA------GLTEVGVFRYRA-ADTATGRVEHEWDHVLIGTLDTTPHPDPAEVANL 135
Query: 127 KYVNREQLKELLRKADAGEEGLKLSPWFRLVVD 159
++V +++ L E +PW V++
Sbjct: 136 RWVRPAEVRAKL-----AAEPAAYTPWLAEVLE 163
>sp|A8GDW2|IDI_SERP5 Isopentenyl-diphosphate Delta-isomerase OS=Serratia proteamaculans
(strain 568) GN=idi PE=3 SV=1
Length = 179
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FSI F S + QQR+ +K +WTN+CC HP + ES L AAQR+L
Sbjct: 33 FSIFIFDSQGRLLLQQRAFSKYHSAGLWTNSCCGHPRWGESTLA---------AAQRRLQ 83
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKY 128
+E+G AE V FT Y+A G EHE D++ + D P+E + +
Sbjct: 84 EEMGFSAELQQVSSFT------YQAAVPGDLIEHEFDHIYVGLFDGKPQGAPEEAHSWSW 137
Query: 129 VNREQLK-ELLRKADAGEEGLKLSPWFRLVVDNF 161
+ +QL E R + K + WF ++ +
Sbjct: 138 TDIQQLTDETTRNPE------KFTVWFLTIMKDL 165
>sp|Q6D3F5|IDI_ERWCT Isopentenyl-diphosphate Delta-isomerase OS=Erwinia carotovora
subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672)
GN=idi PE=3 SV=1
Length = 179
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 26/158 (16%)
Query: 1 MHKCVPNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVR 60
+H+ + ++ F S + QQR+ K +W+NTCCSHP E L
Sbjct: 30 LHRAI----TVYIFNSRQQLLLQQRAEEKYHSGGLWSNTCCSHPAPGEETL--------- 76
Query: 61 NAAQRKLLDELGI-CAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPN 119
AA R+L +E+G+ CA TP+ + Y+ D EHEL ++ F V D N
Sbjct: 77 QAAHRRLYEEMGLRCA-------LTPMFTLTYRLQLDNGLIEHELGHVYFGVTDDVPQIN 129
Query: 120 PDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLV 157
PDEV+ Y+Y + + E+ ++ E + + WF+L
Sbjct: 130 PDEVSSYEY---QSIDEITQRMMMTPE--QFTAWFQLT 162
>sp|Q6LUX5|IDI_PHOPR Isopentenyl-diphosphate Delta-isomerase OS=Photobacterium profundum
GN=idi PE=3 SV=1
Length = 180
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 19/133 (14%)
Query: 23 QQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDE 82
QQR+ K +WTNTCCSHP R+ E +E+ L R+L +E+GI V ++
Sbjct: 52 QQRALGKYHSGGLWTNTCCSHP--RQGETLEQAGL-------RRLTEEMGI----VGLES 98
Query: 83 FTPLGRILYKAPSDGKWGEHELDYLLFI-VRDVSVNPNPDEVAEYKYVNREQLKELLRKA 141
+ +Y+A D + EHE D++L ++++ PN +EV Y++ ++ L+ L A
Sbjct: 99 LDDIASFVYRAELDNQLIEHEWDHVLIANGTELAIIPNSEEVKSYRWWSKADLE--LGLA 156
Query: 142 DAGEEGLKLSPWF 154
D E + WF
Sbjct: 157 DTPE---LFTAWF 166
>sp|B5F9P6|IDI_VIBFM Isopentenyl-diphosphate Delta-isomerase OS=Vibrio fischeri (strain
MJ11) GN=idi PE=3 SV=1
Length = 181
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 67/142 (47%), Gaps = 19/142 (13%)
Query: 23 QQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDE 82
Q+R+ K W+NTCCSHP E+ V A R+L +E+GI V ++
Sbjct: 50 QKRAECKYHSKNKWSNTCCSHPRVNEN---------VEAAGTRRLNEEIGITG--VLPEQ 98
Query: 83 FTPLGRILYKAPSDGKWGEHELDYLLFI-VRDVSVNPNPDEVAEYKYVNREQL-KELLRK 140
F LG +Y+A + EHE DY+L DVS NP+EV++ ++ + + KEL
Sbjct: 99 FVNLGWFIYQAELENGLSEHEQDYILIANTPDVSFILNPEEVSDIQWWSEADIEKELKAN 158
Query: 141 ADAGEEGLKLSPWFRLVVDNFL 162
D S WF V L
Sbjct: 159 PDT------FSVWFPTVYKKVL 174
>sp|A9AST0|IDI_BURM1 Isopentenyl-diphosphate Delta-isomerase OS=Burkholderia multivorans
(strain ATCC 17616 / 249) GN=idi PE=3 SV=1
Length = 176
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 20/152 (13%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FSI F S + QQR+ K +W+NTCC HP RE+ + +A +R+L
Sbjct: 33 FSIFVFDSAGRLLLQQRALNKYHSGGLWSNTCCGHPRPREA---------LPDAVRRRLG 83
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKY 128
+E+G E PVD ++Y+A + EHE ++ D +V P+ EVA +++
Sbjct: 84 EEMGFACELRPVDA------LVYRARFENDLIEHEFVHIHVGRFDGTVAPDFAEVAAWRW 137
Query: 129 VNREQLKELLRKADAGEEGLKLSPWFRLVVDN 160
++ L E + +E + WF +++
Sbjct: 138 IDVPTLLEWM-----ADEPSAFTVWFHCMIER 164
>sp|A8LQ20|IDI_DINSH Isopentenyl-diphosphate Delta-isomerase OS=Dinoroseobacter shibae
(strain DFL 12) GN=idi PE=3 SV=1
Length = 176
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 73/150 (48%), Gaps = 28/150 (18%)
Query: 15 VSYSVMSG-----QQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLD 69
VS VM G Q+R+ K P +W NTCC+HPL+ ES + A R+L +
Sbjct: 31 VSVFVMRGPETLIQRRALDKYHTPGLWANTCCTHPLWDESPA---------DCAVRRLRE 81
Query: 70 ELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVR---DVSVNPNPDEVAEY 126
ELGI P RI Y+A EHE+ LFI ++ V PNP+EVAE
Sbjct: 82 ELGITGL-YPAHR----DRIEYRADVGNGLIEHEV-VDLFIAEAPANLKVAPNPEEVAEV 135
Query: 127 KYVNREQLKELLRKADAGEEGLKLSPWFRL 156
K+V+ +L +++ + +PW R+
Sbjct: 136 KWVDLYELNAQVKRRPE-----RYTPWLRI 160
>sp|Q9Z5D3|IDI_RHOS4 Isopentenyl-diphosphate Delta-isomerase OS=Rhodobacter sphaeroides
(strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=idi
PE=3 SV=1
Length = 177
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 74/150 (49%), Gaps = 28/150 (18%)
Query: 15 VSYSVMSG-----QQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLD 69
+S VM+G Q+R+ K P +W NTCC+HP + E + A R+L +
Sbjct: 31 ISVFVMAGEAVLIQRRAAGKYHTPGLWANTCCTHPRWGEE---------AADCAVRRLRE 81
Query: 70 ELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVR---DVSVNPNPDEVAEY 126
ELGI V F R+ Y+A EHE+ +F+ D+ VNP+P+EV E
Sbjct: 82 ELGITG---LVTVFA--DRVEYRADVGNGLTEHEV-VDIFVAEAPSDLPVNPDPEEVWET 135
Query: 127 KYVNREQLKELLRKADAGEEGLKLSPWFRL 156
++V+ L +L R+ E + +PW R+
Sbjct: 136 RWVD---LTDLAREVKEHPE--RFTPWLRI 160
>sp|A3PL07|IDI_RHOS1 Isopentenyl-diphosphate Delta-isomerase OS=Rhodobacter sphaeroides
(strain ATCC 17029 / ATH 2.4.9) GN=idi PE=3 SV=2
Length = 177
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 74/150 (49%), Gaps = 28/150 (18%)
Query: 15 VSYSVMSG-----QQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLD 69
+S VM+G Q+R+ K P +W NTCC+HP + E + A R+L +
Sbjct: 31 ISVFVMAGEAVLIQRRAAGKYHTPGLWANTCCTHPRWGEE---------AADCAVRRLRE 81
Query: 70 ELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVR---DVSVNPNPDEVAEY 126
ELGI V F R+ Y+A EHE+ +F+ D+ VNP+P+EV E
Sbjct: 82 ELGITG---LVTVFA--DRVEYRADVGNGLTEHEV-VDIFVAEAPSDLPVNPDPEEVWET 135
Query: 127 KYVNREQLKELLRKADAGEEGLKLSPWFRL 156
++V+ L +L R+ E + +PW R+
Sbjct: 136 RWVD---LTDLAREVKEHPE--RFTPWLRI 160
>sp|Q5E7U8|IDI_VIBF1 Isopentenyl-diphosphate Delta-isomerase OS=Vibrio fischeri (strain
ATCC 700601 / ES114) GN=idi PE=3 SV=1
Length = 181
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 67/142 (47%), Gaps = 19/142 (13%)
Query: 23 QQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDE 82
Q+R+ K W+NTCCSHP E+ V A R+L +E+GI V ++
Sbjct: 50 QKRAECKYHSKNKWSNTCCSHPRVNEN---------VEVAGTRRLNEEIGITG--VLPEQ 98
Query: 83 FTPLGRILYKAPSDGKWGEHELDYLLFI-VRDVSVNPNPDEVAEYKYVNREQL-KELLRK 140
F LG +Y+A + EHE DY+L DVS NP+EV++ ++ + + KE+
Sbjct: 99 FVNLGWFIYQAELENGLSEHEQDYILIANTPDVSFILNPEEVSDIQWWSEADIEKEMKAN 158
Query: 141 ADAGEEGLKLSPWFRLVVDNFL 162
D S WF V L
Sbjct: 159 PDT------FSVWFPTVYKKVL 174
>sp|Q5NWG5|IDI2_AROAE Isopentenyl-diphosphate Delta-isomerase 2 OS=Aromatoleum aromaticum
(strain EbN1) GN=idi2 PE=3 SV=1
Length = 189
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 15/131 (11%)
Query: 10 SILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLD 69
SI F S+S + Q+R+ K +W+NTCCSHP EE+A +AA+R+L +
Sbjct: 34 SIFVFDSHSRLMLQRRAAGKYHSGGLWSNTCCSHPRPN-----EESA----DAARRRLRE 84
Query: 70 ELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYV 129
E+G+ E F +Y+ EHE D++ F D NPDE ++K+V
Sbjct: 85 EMGVDCELKKAFSF------VYRTKFGSGLIEHEFDHVFFGNHDGRPVLNPDEADDWKWV 138
Query: 130 NREQLKELLRK 140
+ +L +RK
Sbjct: 139 DLTELTVDVRK 149
>sp|Q7N0A6|IDI2_PHOLL Isopentenyl-diphosphate Delta-isomerase 2 OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=idi2 PE=3
SV=1
Length = 177
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 20/156 (12%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FSI F + + Q+R+ TK +WTN+CC HP R E +E AA R+L
Sbjct: 33 FSIFVFDNKGNLLLQKRAATKYHSAGLWTNSCCGHP--RVGEALEA-------AAHRRLG 83
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKY 128
+E+G D P+ + + +Y A E+E D++ D N DEV++YK+
Sbjct: 84 EEMGF---DCPLKKVSSF---IYHAILPNNLIEYEYDHVFIGRFDKEPIINLDEVSDYKW 137
Query: 129 VNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFK 164
VN +L+ L+ A + WF+ +++ ++
Sbjct: 138 VNLLKLRALINNAPD-----VYTVWFKKIINGLSYQ 168
>sp|B9KK15|IDI_RHOSK Isopentenyl-diphosphate Delta-isomerase OS=Rhodobacter sphaeroides
(strain KD131 / KCTC 12085) GN=idi PE=3 SV=1
Length = 177
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 74/150 (49%), Gaps = 28/150 (18%)
Query: 15 VSYSVMSG-----QQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLD 69
+S VM+G Q+R+ K P +W NTCC+HP + E + A R+L +
Sbjct: 31 ISVFVMAGEAVLIQRRAAGKYHTPGLWANTCCTHPRWGEE---------AADCAVRRLRE 81
Query: 70 ELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVR---DVSVNPNPDEVAEY 126
ELGI V F R+ Y+A EHE+ +F+ D+ VNP+P+EV E
Sbjct: 82 ELGITG---LVTVFA--DRVEYRADVGNGLIEHEV-VDIFVAEAPSDLPVNPDPEEVWET 135
Query: 127 KYVNREQLKELLRKADAGEEGLKLSPWFRL 156
++V+ L +L R+ E + +PW R+
Sbjct: 136 RWVD---LTDLAREVKEHPE--RFTPWLRI 160
>sp|A1WXH5|IDI_HALHL Isopentenyl-diphosphate Delta-isomerase OS=Halorhodospira halophila
(strain DSM 244 / SL1) GN=idi PE=3 SV=1
Length = 175
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 24/155 (15%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
F + F + Q+R+ +K F +W+NTCC HP R E GV AA+R+L
Sbjct: 33 FCVFVFNPRGELLLQRRADSKYHFSGLWSNTCCGHP--RPGE-------GVTEAAERRLG 83
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYL-LFIVRDVSVNPNPD--EVAE 125
+E G PV +FT Y A D G E +Y + I R + P PD E+
Sbjct: 84 EEFGFVTRLHPVAQFT------YHA-EDHHTGLAEYEYAHVLIGRAPTDQPAPDPLEIGA 136
Query: 126 YKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDN 160
+++ L +AD + L+ +PWFR ++
Sbjct: 137 WEWA-----APLRIQADTQQYPLRYTPWFRRLIQE 166
>sp|B1VTW2|IDI_STRGG Isopentenyl-diphosphate Delta-isomerase OS=Streptomyces griseus
subsp. griseus (strain JCM 4626 / NBRC 13350) GN=idi
PE=3 SV=1
Length = 197
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 64/153 (41%), Gaps = 24/153 (15%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FS+ F + Q+R+ K P VW+NTCC HP E+ AA R+
Sbjct: 51 FSVFLFDEQGRLLLQRRALGKYHSPGVWSNTCCGHPYPGEAPFA---------AAARRTH 101
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWG--EHELDYLLFIVRDVSVNPNPDEVAEY 126
+ELG+ G + Y P D G E E ++L + + P+P+EV E
Sbjct: 102 EELGLSP-----SLLAEAGTVRYNHP-DPASGLVEQEFNHLFVGLAQTAPKPDPEEVGET 155
Query: 127 KYVNREQLKELLRKADAGEEGLKLSPWFRLVVD 159
+V +L E KA S WF V+D
Sbjct: 156 AFVTAAELAERHAKA-------PFSAWFMTVLD 181
>sp|A4WRA6|IDI_RHOS5 Isopentenyl-diphosphate Delta-isomerase OS=Rhodobacter sphaeroides
(strain ATCC 17025 / ATH 2.4.3) GN=idi PE=3 SV=2
Length = 177
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 33/164 (20%)
Query: 15 VSYSVMSG-----QQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLD 69
+S VM+G Q+R+ K P +W NTCC+HP + E+ + A R+L +
Sbjct: 31 ISVFVMAGESVLIQRRAAGKYHTPGLWANTCCTHPRWGEA---------AADCAVRRLRE 81
Query: 70 ELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHEL--DYLLFIVRDVSVNPNPDEVAEYK 127
ELGI V F ++ Y+A EHE+ ++ +D+ V P+P+EV E +
Sbjct: 82 ELGITGL---VTVFA--DQVEYRADVGSGLIEHEVVDIFVAEAPQDLPVAPDPEEVWETR 136
Query: 128 YVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEK 171
+V+ L +L R+ + E + +PW R+ + DH+E+
Sbjct: 137 WVD---LHDLAREVEEHPE--RFTPWLRIYLA-------DHMER 168
>sp|C1AP18|IDI_MYCBT Isopentenyl-diphosphate Delta-isomerase OS=Mycobacterium bovis
(strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=idi
PE=3 SV=1
Length = 176
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 65/132 (49%), Gaps = 17/132 (12%)
Query: 24 QRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEF 83
+R+ TK T+P VWTN+CC HPL ES + A +R+L ELG+ + VD
Sbjct: 58 RRAATKRTWPAVWTNSCCGHPLPGES---------LPGAIRRRLAAELGLTPDR--VDLI 106
Query: 84 TPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADA 143
P R Y+A E+E+ + + D PN DEV ++++ EQ +R A
Sbjct: 107 LPGFR--YRAAMADGTVENEICPVYRVQVDQQPRPNSDEVDAIRWLSWEQ---FVRDVTA 161
Query: 144 GEEGLKLSPWFR 155
G +SPW R
Sbjct: 162 GVIA-PVSPWCR 172
>sp|A1KJG2|IDI_MYCBP Isopentenyl-diphosphate Delta-isomerase OS=Mycobacterium bovis
(strain BCG / Pasteur 1173P2) GN=idi PE=3 SV=1
Length = 176
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 65/132 (49%), Gaps = 17/132 (12%)
Query: 24 QRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEF 83
+R+ TK T+P VWTN+CC HPL ES + A +R+L ELG+ + VD
Sbjct: 58 RRAATKRTWPAVWTNSCCGHPLPGES---------LPGAIRRRLAAELGLTPDR--VDLI 106
Query: 84 TPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADA 143
P R Y+A E+E+ + + D PN DEV ++++ EQ +R A
Sbjct: 107 LPGFR--YRAAMADGTVENEICPVYRVQVDQQPRPNSDEVDAIRWLSWEQ---FVRDVTA 161
Query: 144 GEEGLKLSPWFR 155
G +SPW R
Sbjct: 162 GVIA-PVSPWCR 172
>sp|Q7VEU0|IDI_MYCBO Isopentenyl-diphosphate Delta-isomerase OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=idi PE=3 SV=1
Length = 176
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 22/149 (14%)
Query: 12 LGFVSY-SVMSGQ----QRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRK 66
L F SY S + Q +R+ TK T+P VWTN+CC HPL ES + A +R+
Sbjct: 41 LAFSSYVSDLHDQLLITRRAATKRTWPAVWTNSCCGHPLPGES---------LPGAIRRR 91
Query: 67 LLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEY 126
L ELG+ + VD P R Y+A E+E+ + + D PN DEV
Sbjct: 92 LAAELGLTPDR--VDLILPGFR--YRAAMADGTVENEICPVYRVQVDQQPRPNSDEVDAI 147
Query: 127 KYVNREQLKELLRKADAGEEGLKLSPWFR 155
++++ EQ +R AG +SPW R
Sbjct: 148 RWLSWEQ---FVRDVTAGVIA-PVSPWCR 172
>sp|P72002|IDI_MYCTU Isopentenyl-diphosphate Delta-isomerase OS=Mycobacterium
tuberculosis GN=idi PE=3 SV=1
Length = 203
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FS F + + +R+ TK T+P VWTN+CC HPL ES + A +R+L
Sbjct: 43 FSSYVFDLHDQLLITRRAATKRTWPAVWTNSCCGHPLPGES---------LPGAIRRRLA 93
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKY 128
ELG+ + VD P R Y+A E+E+ + + D PN DEV ++
Sbjct: 94 AELGLTPDR--VDLILPGFR--YRAAMADGTVENEICPVYRVQVDQQPRPNSDEVDAIRW 149
Query: 129 VNREQLKELLRKADAGEEGLKLSPWFR 155
++ EQ +R AG +SPW R
Sbjct: 150 LSWEQ---FVRDVTAGVIA-PVSPWCR 172
>sp|A5U3A5|IDI_MYCTA Isopentenyl-diphosphate Delta-isomerase OS=Mycobacterium
tuberculosis (strain ATCC 25177 / H37Ra) GN=idi PE=3
SV=1
Length = 203
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FS F + + +R+ TK T+P VWTN+CC HPL ES + A +R+L
Sbjct: 43 FSSYVFDLHDQLLITRRAATKRTWPAVWTNSCCGHPLPGES---------LPGAIRRRLA 93
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKY 128
ELG+ + VD P R Y+A E+E+ + + D PN DEV ++
Sbjct: 94 AELGLTPDR--VDLILPGFR--YRAAMADGTVENEICPVYRVQVDQQPRPNSDEVDAIRW 149
Query: 129 VNREQLKELLRKADAGEEGLKLSPWFR 155
++ EQ +R AG +SPW R
Sbjct: 150 LSWEQ---FVRDVTAGVIA-PVSPWCR 172
>sp|Q9X7Q6|IDI_STRCO Isopentenyl-diphosphate Delta-isomerase OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=idi PE=3 SV=1
Length = 197
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 65/153 (42%), Gaps = 24/153 (15%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FS+ F + QQR+ K P VW+NTCC HP E+ AA R+
Sbjct: 51 FSVFLFDERGRLLIQQRALGKYHSPGVWSNTCCGHPYPGEAPFA---------AAARRTF 101
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWG--EHELDYLLFIVRDVSVNPNPDEVAEY 126
+ELG+ G + Y P D G E E ++L + + P+P+EVA
Sbjct: 102 EELGVSP-----SLLAEAGTVRYNHP-DPASGLVEQEYNHLFVGLVQAELRPDPEEVAGT 155
Query: 127 KYVNREQLKELLRKADAGEEGLKLSPWFRLVVD 159
+V+ +L E R A S WF V+D
Sbjct: 156 AFVSPAELTE--RHAQD-----TFSAWFMTVLD 181
>sp|Q6A5Z1|IDI_PROAC Isopentenyl-diphosphate Delta-isomerase OS=Propionibacterium acnes
(strain KPA171202 / DSM 16379) GN=idi PE=3 SV=1
Length = 199
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 62/135 (45%), Gaps = 21/135 (15%)
Query: 24 QRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEF 83
+R+ TKV +P VWTNTCC HP E+ + +AA R+ ELG+ + P
Sbjct: 65 RRALTKVAWPGVWTNTCCGHPRVGET---------IIDAAVRRTHQELGLDLD--PRRMR 113
Query: 84 TPLGRILYKAPSDGKWGEHE-----LDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELL 138
L Y+A G E E + L V +NP+PDEV E +V + + +L
Sbjct: 114 VVLPDFSYRATDSGGIVEDEFCPVVVARLSLPEELVELNPDPDEVEEVAWVGWQDMYDLA 173
Query: 139 RKADAGEEGLKLSPW 153
R A LSPW
Sbjct: 174 RSMPA-----LLSPW 183
>sp|Q7N1V4|IDI1_PHOLL Isopentenyl-diphosphate Delta-isomerase 1 OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=idi1 PE=3
SV=1
Length = 176
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FS S + + QQR+ +K+ +P W+N+ CSHP E + +A R+
Sbjct: 33 FSCFIINSKNEVYIQQRAQSKLLWPGYWSNSYCSHPRPDEE---------ISHAVMRRAE 83
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKY 128
+ELGI + P L + YK EHEL ++ + D NP EV+ +
Sbjct: 84 EELGIVINEEP----KFLYKFQYKEKYKDVGYEHELCHVFVVFTDTPPTENPKEVSAGFF 139
Query: 129 VNREQLKELLRKADAGEEGLKLSPWFR 155
+N + ++E + + +PWF+
Sbjct: 140 INIKDVQEYIHNNEEF-----CTPWFK 161
>sp|A5CV36|IDI_CLAM3 Isopentenyl-diphosphate Delta-isomerase OS=Clavibacter
michiganensis subsp. michiganensis (strain NCPPB 382)
GN=idi PE=3 SV=1
Length = 194
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 65/148 (43%), Gaps = 18/148 (12%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FS F + + +R+ K+T+P VWTN+ C HP E +R A R+
Sbjct: 37 FSCHVFDAQGRILVTRRAIGKLTWPGVWTNSFCGHPAPDED---------MREAVHRRAE 87
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKY 128
ELG+ E V + L Y+A E+E+ + V V+P P+EV EY++
Sbjct: 88 QELGLELESVELV----LPDFRYRATDAAGVVENEICPVFRAVAASPVDPRPEEVGEYQW 143
Query: 129 VNREQLKELLRKADAGEEGLKLSPWFRL 156
V+ EQL + SPW L
Sbjct: 144 VDPEQLIPAV-----AHTPWAFSPWLTL 166
>sp|B0RIB7|IDI_CLAMS Isopentenyl-diphosphate Delta-isomerase OS=Clavibacter
michiganensis subsp. sepedonicus (strain ATCC 33113 /
JCM 9667) GN=idi PE=3 SV=1
Length = 190
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 18/148 (12%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FS F + + +R+ K+T+P VWTN+ C HP E L A R+
Sbjct: 37 FSCHVFDAEGRILVTRRAIGKLTWPGVWTNSFCGHPAPDEDML---------EAVHRRAE 87
Query: 69 DELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKY 128
ELG+ E V + L Y+A E+E+ + V V+P P+EV EY++
Sbjct: 88 QELGLTLESVELV----LPDFRYRATDAAGVVENEICPVFRAVAATPVDPRPEEVGEYQW 143
Query: 129 VNREQLKELLRKADAGEEGLKLSPWFRL 156
V+ EQL + SPW L
Sbjct: 144 VDPEQLIPAV-----AHTPWAFSPWLTL 166
>sp|A1T5G2|IDI_MYCVP Isopentenyl-diphosphate Delta-isomerase OS=Mycobacterium
vanbaalenii (strain DSM 7251 / PYR-1) GN=idi PE=3 SV=1
Length = 181
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 21/131 (16%)
Query: 24 QRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEF 83
+R+ K TFP +WTNTCC HP E+ +++A R++ +ELG+ D+
Sbjct: 54 RRAVHKRTFPGIWTNTCCGHPAPGEA---------LQDAVTRRVREELGVGITDL----R 100
Query: 84 TPLGRILYKAPSDGKWGEHELDYLLFIVRDVS-VNPNPDEVAEYKYVNREQLKELLRKAD 142
L Y+A + E+E+ +F R V V+P+ DEVA++ +V + ++
Sbjct: 101 CVLPDFRYRAVAADGVVENEV-CPVFCGRAVGQVHPDRDEVADHVWVPWQHMRA------ 153
Query: 143 AGEEGLKLSPW 153
A E G +SPW
Sbjct: 154 AAEFGWAISPW 164
>sp|Q16DR2|IDI_ROSDO Isopentenyl-diphosphate Delta-isomerase OS=Roseobacter
denitrificans (strain ATCC 33942 / OCh 114) GN=idi PE=3
SV=1
Length = 176
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 69/151 (45%), Gaps = 30/151 (19%)
Query: 15 VSYSVMSG-----QQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLD 69
VS V+ G QQR+ K P +WTNTCC+HP + E+ + A R+L +
Sbjct: 31 VSVFVLKGDAVLMQQRAMCKYHTPGLWTNTCCTHPEWDEAPEV---------CAIRRLDE 81
Query: 70 ELGICAEDVPVDEFTPLGR--ILYKAPSDGKWGEHELDYLLFIVRD--VSVNPNPDEVAE 125
ELG V P R + Y+A G EHE+ + D + V PNPDEV
Sbjct: 82 ELG-------VRGLIPQHRHHLEYRADVGGGLIEHEVVDVFVAEADETLVVLPNPDEVMA 134
Query: 126 YKYVNREQLKELLRKADAGEEGLKLSPWFRL 156
++V+ + L + + + +PW R+
Sbjct: 135 VEWVHFDDLVD-----QVAQHPDRYTPWLRI 160
>sp|Q82MJ7|IDI_STRAW Isopentenyl-diphosphate Delta-isomerase OS=Streptomyces avermitilis
(strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804
/ NRRL 8165 / MA-4680) GN=idi PE=3 SV=1
Length = 197
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 61/152 (40%), Gaps = 22/152 (14%)
Query: 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLL 68
FS+ F + QQR+ K P VW+NTCC HP E+ AA R+
Sbjct: 51 FSVFLFDEQGRLLLQQRALGKYHSPGVWSNTCCGHPYPGEAPFA---------AAARRTH 101
Query: 69 DELGICAEDVPVDEFTPLGRILYKAP-SDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYK 127
+ELG+ G + Y P D E E ++L + + P+ +E+ +
Sbjct: 102 EELGVSP-----SLLAEAGTVRYNHPDPDSGLVEQEFNHLFVGLVQSPLRPDAEEIGDTA 156
Query: 128 YVNREQLKELLRKADAGEEGLKLSPWFRLVVD 159
+V +L E K S WF V+D
Sbjct: 157 FVTAAELAERHAKD-------PFSSWFMTVLD 181
>sp|P26173|IDI_RHOCB Isopentenyl-diphosphate Delta-isomerase OS=Rhodobacter capsulatus
(strain ATCC BAA-309 / NBRC 16581 / SB1003) GN=idi PE=1
SV=1
Length = 176
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 21/140 (15%)
Query: 23 QQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDE 82
QQR+ +K P +W NTCC+HP + E A R+L ELGI +
Sbjct: 45 QQRALSKYHTPGLWANTCCTHPYWGED---------APTCAARRLGQELGIVG-----LK 90
Query: 83 FTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPD--EVAEYKYVNREQLKELLRK 140
+G++ Y+A + EHE+ + + P PD EVA+ ++V + L+ +
Sbjct: 91 LRHMGQLEYRADVNNGMIEHEVVEVFTAEAPEGIEPQPDPEEVADTEWVRIDALRSEIH- 149
Query: 141 ADAGEEGLKLSPWFRLVVDN 160
A E + +PW ++ ++
Sbjct: 150 --ANPE--RFTPWLKIYIEQ 165
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,197,115
Number of Sequences: 539616
Number of extensions: 3166358
Number of successful extensions: 7083
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 6948
Number of HSP's gapped (non-prelim): 131
length of query: 187
length of database: 191,569,459
effective HSP length: 111
effective length of query: 76
effective length of database: 131,672,083
effective search space: 10007078308
effective search space used: 10007078308
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)