Query 029829
Match_columns 187
No_of_seqs 141 out of 1597
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 06:24:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029829.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029829hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pny_A Isopentenyl-diphosphate 100.0 2.6E-39 9E-44 267.6 20.7 175 2-186 66-246 (246)
2 2dho_A Isopentenyl-diphosphate 100.0 7.7E-39 2.6E-43 263.0 20.8 181 2-186 55-235 (235)
3 3dup_A MUTT/nudix family prote 100.0 1.4E-28 4.8E-33 208.5 17.5 146 2-165 114-264 (300)
4 1hzt_A Isopentenyl diphosphate 100.0 3.7E-27 1.3E-31 185.8 16.1 145 2-164 28-172 (190)
5 2fkb_A Putative nudix hydrolas 99.9 1.6E-23 5.5E-28 162.9 16.6 135 2-164 33-167 (180)
6 3grn_A MUTT related protein; s 99.9 5.8E-22 2E-26 150.2 16.5 143 2-175 4-147 (153)
7 1sjy_A MUTT/nudix family prote 99.9 1.2E-20 4.1E-25 143.1 17.2 121 2-141 9-134 (159)
8 1q27_A Putative nudix hydrolas 99.9 3E-21 1E-25 148.9 14.0 118 6-141 34-152 (171)
9 3oga_A Nucleoside triphosphata 99.9 8E-21 2.7E-25 145.6 12.9 136 2-160 23-161 (165)
10 3i7u_A AP4A hydrolase; nudix p 99.8 1E-20 3.5E-25 141.8 12.1 122 6-162 4-126 (134)
11 3gwy_A Putative CTP pyrophosph 99.8 5.7E-20 2E-24 137.3 12.7 124 6-162 6-130 (140)
12 1ktg_A Diadenosine tetraphosph 99.8 3.1E-19 1E-23 132.3 16.0 113 5-138 2-119 (138)
13 3r03_A Nudix hydrolase; struct 99.8 8.9E-20 3E-24 136.1 12.9 128 4-162 6-133 (144)
14 2o1c_A DATP pyrophosphohydrola 99.8 3.8E-19 1.3E-23 132.9 16.4 131 6-162 9-146 (150)
15 1rya_A GDP-mannose mannosyl hy 99.8 2.4E-19 8.1E-24 136.0 15.1 129 6-159 18-150 (160)
16 2pbt_A AP4A hydrolase; nudix p 99.8 1.5E-19 5.1E-24 133.2 13.0 123 6-163 4-127 (134)
17 2rrk_A ORF135, CTP pyrophospho 99.8 2.2E-19 7.7E-24 133.1 13.0 128 3-163 5-132 (140)
18 3shd_A Phosphatase NUDJ; nudix 99.8 4.5E-19 1.5E-23 133.9 14.7 126 6-163 5-132 (153)
19 3hhj_A Mutator MUTT protein; n 99.8 3E-19 1E-23 135.9 13.6 128 4-162 27-154 (158)
20 1vcd_A NDX1; nudix protein, di 99.8 7.2E-19 2.5E-23 128.3 14.7 118 7-162 3-121 (126)
21 3exq_A Nudix family hydrolase; 99.8 1.5E-19 5.2E-24 138.6 11.6 127 4-163 8-136 (161)
22 2b0v_A Nudix hydrolase; struct 99.8 6.8E-19 2.3E-23 132.5 13.8 126 8-162 10-137 (153)
23 4dyw_A MUTT/nudix family prote 99.8 5E-19 1.7E-23 135.1 12.6 125 4-161 27-153 (157)
24 3son_A Hypothetical nudix hydr 99.8 6.6E-19 2.3E-23 132.6 12.8 126 3-162 1-138 (149)
25 2azw_A MUTT/nudix family prote 99.8 8.6E-19 2.9E-23 131.1 12.9 126 5-162 17-144 (148)
26 3ees_A Probable pyrophosphohyd 99.8 5.5E-19 1.9E-23 132.7 11.7 124 6-162 21-144 (153)
27 3f6a_A Hydrolase, nudix family 99.8 9E-19 3.1E-23 133.5 12.9 131 1-161 1-147 (159)
28 3eds_A MUTT/nudix family prote 99.8 1.3E-19 4.3E-24 137.8 8.0 115 3-140 18-138 (153)
29 3fcm_A Hydrolase, nudix family 99.8 1.3E-18 4.4E-23 137.8 14.1 132 3-164 42-183 (197)
30 1f3y_A Diadenosine 5',5'''-P1, 99.8 1.1E-18 3.6E-23 132.7 12.5 118 2-139 10-147 (165)
31 3u53_A BIS(5'-nucleosyl)-tetra 99.8 2.8E-18 9.6E-23 130.6 14.7 113 6-139 3-127 (155)
32 1v8y_A ADP-ribose pyrophosphat 99.8 2E-18 6.8E-23 133.3 13.5 114 5-141 32-148 (170)
33 2w4e_A MUTT/nudix family prote 99.8 4.8E-18 1.6E-22 128.1 13.6 115 6-141 5-121 (145)
34 2yvp_A NDX2, MUTT/nudix family 99.8 4.2E-18 1.4E-22 132.6 13.4 114 7-141 42-158 (182)
35 3q93_A 7,8-dihydro-8-oxoguanin 99.8 2.7E-18 9.3E-23 133.8 11.8 125 5-162 23-148 (176)
36 3e57_A Uncharacterized protein 99.8 2.4E-19 8.1E-24 144.9 5.8 137 2-159 63-201 (211)
37 3i9x_A MUTT/nudix family prote 99.8 1.3E-18 4.3E-23 136.6 8.8 137 4-169 25-176 (187)
38 2b06_A MUTT/nudix family prote 99.8 3.6E-18 1.2E-22 129.2 10.7 124 4-162 6-133 (155)
39 3gg6_A Nudix motif 18, nucleos 99.8 3.8E-19 1.3E-23 134.9 5.0 110 4-138 18-131 (156)
40 3id9_A MUTT/nudix family prote 99.8 3.1E-18 1.1E-22 131.8 9.9 123 3-161 20-148 (171)
41 2jvb_A Protein PSU1, mRNA-deca 99.8 1.7E-17 6E-22 124.2 13.2 110 6-141 4-118 (146)
42 1nqz_A COA pyrophosphatase (MU 99.7 2.3E-18 7.9E-23 135.6 8.5 111 8-138 36-152 (194)
43 2kdv_A RNA pyrophosphohydrolas 99.7 2E-17 6.7E-22 127.6 13.6 115 3-137 5-135 (164)
44 1mut_A MUTT, nucleoside tripho 99.7 4.3E-19 1.5E-23 129.7 4.0 118 11-161 9-126 (129)
45 3h95_A Nucleoside diphosphate- 99.7 2.3E-17 7.9E-22 130.8 14.3 127 7-162 27-155 (199)
46 2yyh_A MUTT domain, 8-OXO-DGTP 99.7 1.3E-17 4.4E-22 124.1 11.4 124 6-163 9-136 (139)
47 1k2e_A Nudix homolog; nudix/MU 99.7 3.5E-18 1.2E-22 130.1 7.2 126 7-167 2-138 (156)
48 2pqv_A MUTT/nudix family prote 99.7 2.8E-18 9.7E-23 129.8 6.5 110 4-137 17-129 (154)
49 3fk9_A Mutator MUTT protein; s 99.7 1.9E-17 6.4E-22 130.6 11.1 124 6-162 4-128 (188)
50 1g0s_A Hypothetical 23.7 kDa p 99.7 1.2E-16 4.1E-21 128.1 15.3 116 6-141 57-183 (209)
51 3q1p_A Phosphohydrolase (MUTT/ 99.7 5.8E-18 2E-22 135.2 7.3 123 6-161 68-191 (205)
52 3cng_A Nudix hydrolase; struct 99.7 7.7E-17 2.6E-21 126.8 11.9 121 8-164 42-163 (189)
53 3o8s_A Nudix hydrolase, ADP-ri 99.7 1.3E-17 4.5E-22 133.2 7.2 123 6-162 70-193 (206)
54 3gz5_A MUTT/nudix family prote 99.7 4.1E-17 1.4E-21 133.7 9.9 137 6-173 22-164 (240)
55 3f13_A Putative nudix hydrolas 99.7 8.1E-17 2.8E-21 124.5 10.6 113 8-163 17-129 (163)
56 1mk1_A ADPR pyrophosphatase; n 99.7 1.3E-16 4.4E-21 127.4 12.0 114 7-141 44-162 (207)
57 2qjo_A Bifunctional NMN adenyl 99.7 1.5E-16 5.1E-21 134.8 12.9 134 5-162 202-338 (341)
58 2fvv_A Diphosphoinositol polyp 99.7 3.8E-17 1.3E-21 129.8 8.6 111 4-140 39-153 (194)
59 2fb1_A Conserved hypothetical 99.7 3.9E-17 1.3E-21 132.7 8.6 111 6-136 13-127 (226)
60 2qjt_B Nicotinamide-nucleotide 99.7 2.2E-16 7.6E-21 134.5 13.6 135 5-163 207-346 (352)
61 1vk6_A NADH pyrophosphatase; 1 99.7 1.5E-16 5.1E-21 132.7 11.5 103 9-136 142-245 (269)
62 1x51_A A/G-specific adenine DN 99.7 2.9E-16 9.9E-21 119.0 11.7 121 10-163 23-148 (155)
63 1vhz_A ADP compounds hydrolase 99.7 1.9E-16 6.5E-21 125.9 10.6 113 7-141 50-164 (198)
64 3q91_A Uridine diphosphate glu 99.7 2.8E-16 9.7E-21 127.3 11.7 119 5-141 35-192 (218)
65 3o6z_A GDP-mannose pyrophospha 99.7 6.6E-16 2.3E-20 121.9 13.0 115 5-141 44-170 (191)
66 3qsj_A Nudix hydrolase; struct 99.6 8.2E-15 2.8E-19 119.9 15.7 148 3-161 6-207 (232)
67 2fml_A MUTT/nudix family prote 99.6 1.6E-15 5.4E-20 126.5 11.3 151 6-174 39-206 (273)
68 3fjy_A Probable MUTT1 protein; 99.6 2.3E-15 7.8E-20 129.7 12.1 121 18-173 38-179 (364)
69 2a6t_A SPAC19A8.12; alpha/beta 99.6 9.5E-16 3.2E-20 127.9 8.8 109 7-140 102-215 (271)
70 2dsc_A ADP-sugar pyrophosphata 99.6 2.7E-15 9.1E-20 120.2 9.8 114 6-140 61-186 (212)
71 3fsp_A A/G-specific adenine gl 99.6 8.3E-15 2.8E-19 126.9 11.0 118 7-161 241-358 (369)
72 1u20_A U8 snoRNA-binding prote 99.6 1.2E-15 4.1E-20 122.6 3.5 101 14-136 52-164 (212)
73 1q33_A Pyrophosphatase, ADP-ri 99.3 9E-12 3.1E-16 104.8 10.6 118 19-164 140-276 (292)
74 2xsq_A U8 snoRNA-decapping enz 99.3 2.7E-12 9.1E-17 103.7 5.4 94 19-135 66-171 (217)
75 3rh7_A Hypothetical oxidoreduc 98.8 9.5E-09 3.3E-13 87.5 9.1 108 7-163 184-292 (321)
76 3kvh_A Protein syndesmos; NUDT 98.7 1.2E-08 4E-13 81.1 6.1 100 5-131 20-143 (214)
77 3bho_A Cleavage and polyadenyl 98.6 2E-07 6.8E-12 74.5 10.4 118 2-136 55-184 (208)
78 3brc_A Conserved protein of un 21.2 2.5E+02 0.0087 20.7 6.4 41 8-71 109-149 (156)
79 3t3l_A Frataxin, mitochondrial 21.1 2.3E+02 0.0079 20.2 6.3 54 11-78 61-120 (129)
80 1ew4_A CYAY protein; friedreic 20.5 1.9E+02 0.0066 19.8 5.1 44 18-76 58-104 (106)
No 1
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=100.00 E-value=2.6e-39 Score=267.58 Aligned_cols=175 Identities=39% Similarity=0.758 Sum_probs=152.4
Q ss_pred CCCCceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCC------CChhhhhhhhcHHHHHHHHHHHHhCCCc
Q 029829 2 HKCVPNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYR------ESELIEENALGVRNAAQRKLLDELGICA 75 (187)
Q Consensus 2 ~g~~h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~g------Es~~~~~~~~~~~~Aa~REl~EE~Gl~~ 75 (187)
+|++|++|+|+|+|.+|+||||||+..|.+|||+|++|+|||+++| |++ .|+.+||+||+.|||||.+
T Consensus 66 ~g~~h~av~v~v~~~~g~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~------~~~~eAA~REl~EElGi~~ 139 (246)
T 2pny_A 66 KGLLHRAFSVVLFNTKNRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDA------IGVRRAAQRRLQAELGIPG 139 (246)
T ss_dssp TTCCEEEEEEEEECTTCCEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGG------HHHHHHHHHHHHHHHCCCT
T ss_pred CCcEEEEEEEEEEeCCCEEEEEEecCCCCCCCCceEeccCceeccCCcccccccc------hhHHHHHHHHHHHHHCCCc
Confidence 5899999999999999999999999999999999999999999999 551 1238999999999999998
Q ss_pred cCCCCCCeeeeeEEEEEccCCCCcceeEEEEEEEEecCCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHH
Q 029829 76 EDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFR 155 (187)
Q Consensus 76 ~~~~~~~l~~~~~~~y~~~~~~~~~e~e~~~vf~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~ 155 (187)
..+.+.++.+++.+.|..+....+.+++++++|++..+.++.++++|+.+++|++++++.+++...+ ..+..|+||++
T Consensus 140 ~~v~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~~~~~~~~~~Ev~~~~wv~~eel~~~l~~~~--~~~~~ftp~~~ 217 (246)
T 2pny_A 140 EQISPEDIVFMTIYHHKAKSDRIWGEHEICYLLLVRKNVTLNPDPSETKSILYLSQEELWELLEREA--RGEVKVTPWLR 217 (246)
T ss_dssp TTCCGGGSEEEEEEEEEEESSSSBEEEEEEEEEEEECCCCCCCCTTTEEEEEEECHHHHHHHHHHHH--HTSSCBCHHHH
T ss_pred cccCccccEEEEEEEEEecCCCceeeeEEEEEEEEEECCCCCCChHHeeEEEEEeHHHHHHHHHhcc--CCCceECHhHH
Confidence 7554445688999888877665667788999999887777788889999999999999999998731 01358999999
Q ss_pred HHHHHHHHHHHhHhcccccccccCCCceeec
Q 029829 156 LVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 186 (187)
Q Consensus 156 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 186 (187)
.++++||..||+++++ |.++.|+++||++
T Consensus 218 ~i~~~~l~~ww~~~~~--~~~~~~~~~~~~~ 246 (246)
T 2pny_A 218 TIAERFLYRWWPHLDD--VTPFVELHKIHRV 246 (246)
T ss_dssp HHHHHTHHHHGGGTTC--CGGGCCSSCCEEC
T ss_pred HHHHHHHHHHHHhhhh--hhhccCccceeeC
Confidence 9999999999999998 9999999999986
No 2
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=100.00 E-value=7.7e-39 Score=263.05 Aligned_cols=181 Identities=50% Similarity=0.904 Sum_probs=152.6
Q ss_pred CCCCceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCC
Q 029829 2 HKCVPNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVD 81 (187)
Q Consensus 2 ~g~~h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~ 81 (187)
+|++|++|+|+|+|.+|+||||||+..|..|||+|++|+|||+++||+...++...|+.+||+||+.|||||.+..+.+.
T Consensus 55 ~g~~h~av~v~v~~~~g~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~~~~v~~~ 134 (235)
T 2dho_A 55 KGLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVPPE 134 (235)
T ss_dssp TTCCEEEEEEEEECTTCCEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCGGGSCGG
T ss_pred CCceEEEEEEEEEcCCCEEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCCccccChh
Confidence 58999999999999999999999999999999999999999999994310001112258999999999999998754444
Q ss_pred CeeeeeEEEEEccCCCCcceeEEEEEEEEecCCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHH
Q 029829 82 EFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNF 161 (187)
Q Consensus 82 ~l~~~~~~~y~~~~~~~~~e~e~~~vf~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~ 161 (187)
++.+++.+.|..+..+.+.+++++++|++..+..+.++++|+.+++|++++++.+++...+ ..+..|+||++.++++|
T Consensus 135 ~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~~~~~~~~~~Ev~~~~wv~~~el~~~l~~~~--~~~~~ftp~~~~i~~~~ 212 (235)
T 2dho_A 135 EINYLTRIHYKAQSDGIWGEHEIDYILLVRMNVTLNPDPNEIKSYCYVSKEELKELLKKAA--SGEIKITPWFKIIAATF 212 (235)
T ss_dssp GSEEEEEEEEEEECSSSBEEEEEEEEEEEECCCCCCCCTTTEEEEEEECHHHHHHHHHHHH--TTSSCBCHHHHHHHHHT
T ss_pred hcEEEEEEEEeccCCCccceeEEEEEEEEEECCCCcCChHHEEEEEEEcHHHHHHHHhhcc--CCCcEECHhHHHHHHHH
Confidence 5678999988877655667788999999887777788889999999999999999998731 01358999999999999
Q ss_pred HHHHHhHhcccccccccCCCceeec
Q 029829 162 LFKWWDHLEKGTLNEVIDMKTIHKL 186 (187)
Q Consensus 162 l~~~~~~~~~~~~~~~~~~~~~~~~ 186 (187)
|..||+++++ |.++.++++||++
T Consensus 213 L~~ww~~~~~--~~~~~~~~~~~~~ 235 (235)
T 2dho_A 213 LFKWWDNLNH--LNQFVDHEKIYRM 235 (235)
T ss_dssp HHHHHTTTTC--CGGGCCSSCEEEC
T ss_pred HHHHHhhcch--hhhccCccceeeC
Confidence 9999999997 9999999999986
No 3
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.96 E-value=1.4e-28 Score=208.46 Aligned_cols=146 Identities=16% Similarity=0.118 Sum_probs=126.1
Q ss_pred CCCCceEEEEEEEeCCC---eEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCC
Q 029829 2 HKCVPNIFSILGFVSYS---VMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDV 78 (187)
Q Consensus 2 ~g~~h~av~v~i~~~~g---~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~ 78 (187)
.|++|++|++.+++.+| ++||||||.+|.+|||+|++++|||+++||+ +.+||+||+.||+||++..+
T Consensus 114 ~G~~~~~vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs---------~~eaA~REl~EElGI~~~~~ 184 (300)
T 3dup_A 114 FGVRAYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLS---------LRQNLIKECAEEADLPEALA 184 (300)
T ss_dssp GTCCEEEEEEEEEESCGGGCEEEEEEECTTCSSSTTCEEESEEEECCTTSC---------HHHHHHHHHHHHHCCCHHHH
T ss_pred cceEEEEEEEEEEEecCCeeEEEEEeCCCcccCCCCccccccccCCCCCCC---------HHHHHHHHHHHHhCCChhhh
Confidence 58999999999999887 9999999999999999999999999999999 89999999999999988654
Q ss_pred CCCCeeeeeEEEEEccCCCCcceeEEEEEEEEecC--CcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHH
Q 029829 79 PVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRD--VSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRL 156 (187)
Q Consensus 79 ~~~~l~~~~~~~y~~~~~~~~~e~e~~~vf~~~~~--~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~ 156 (187)
. .+.+.+.+.|.+....+ .+++++|+|.+..+ ..+.+|++||++++|++++++.+++.+ + ..|+||+..
T Consensus 185 ~--~l~~~g~i~y~~~~~~G-~~~E~~~vy~~~l~~~~~p~~~~~EV~~~~~v~~~El~~~l~~-p-----g~F~p~~~l 255 (300)
T 3dup_A 185 R--QAIPVGAITYCMESPAG-IKPDTLFLYDLALPEDFRPHNTDGEMADFMLWPAAKVVEAVRT-T-----EAFKFNVNL 255 (300)
T ss_dssp T--TCEEEEEEEEEEEETTE-EEEEEEEEEEEECCTTCCCCCTTSSEEEEEEEEHHHHHHHHHH-C-----CCBCTTHHH
T ss_pred h--hccccceEEEEEecCCC-eEEEEEEEEEEEecCCCcCCCCchHhheEEEECHHHHHHHHhc-C-----CCcCccHHH
Confidence 3 35678888887765444 35788899887753 445778999999999999999999997 1 489999999
Q ss_pred HHHHHHHHH
Q 029829 157 VVDNFLFKW 165 (187)
Q Consensus 157 ~~~~~l~~~ 165 (187)
++-+||.+.
T Consensus 256 V~ldfl~Rh 264 (300)
T 3dup_A 256 TVIDFAIRH 264 (300)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999998765
No 4
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.95 E-value=3.7e-27 Score=185.78 Aligned_cols=145 Identities=23% Similarity=0.311 Sum_probs=117.0
Q ss_pred CCCCceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCC
Q 029829 2 HKCVPNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVD 81 (187)
Q Consensus 2 ~g~~h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~ 81 (187)
+|++|++|++++++.+|+|||++|+..+..+||.|++|+||++++||+ +.+||+||++||||+.+..+.
T Consensus 28 ~~~~~~~v~~~i~~~~g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt---------~~~aa~REl~EEtGl~~~~~~-- 96 (190)
T 1hzt_A 28 DTRLHLAFSSWLFNAKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGES---------NEDAVIRRCRYELGVEITPPE-- 96 (190)
T ss_dssp ---CEECEEEEEECTTCCEEEEEECTTCSSSTTCEEESEEECCCTTCC---------HHHHHHHHHHHHHCCCBSCCE--
T ss_pred CCceEEEEEEEEEcCCCEEEEEEeCCCCCCCCCcccCcccccCCCCCC---------HHHHHHHHHHHHHCCCchhhh--
Confidence 578899999999998999999999988888999999977899999999 899999999999999987530
Q ss_pred CeeeeeEEEEEccCCCCcceeEEEEEEEEecCCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHH
Q 029829 82 EFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNF 161 (187)
Q Consensus 82 ~l~~~~~~~y~~~~~~~~~e~e~~~vf~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~ 161 (187)
.+++.+.|.....++...+.++++|.+..+..+.++++|+.+++|++++++.+++..+ +..++||++.++++|
T Consensus 97 --~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~-----~~~~~p~~~~~~~~~ 169 (190)
T 1hzt_A 97 --SIYPDFRYRATDPSGIVENEVCPVFAARTTSALQINDDEVMDYQWCDLADVLHGIDAT-----PWAFSPWMVMQATNR 169 (190)
T ss_dssp --EEETTCEEEEECTTSCEEEEECCEEEEEBCSCCCCCTTTEEEEEEECHHHHHHHHHHC-----GGGBCHHHHHHHHSH
T ss_pred --eeeeeEEEEeeCCCCCcceEEEEEEEEecCCCCcCCccceeeEEEecHHHHHHHHHcC-----hhhcCchHHHHHHHH
Confidence 3456565654433333335566788887666666778899999999999999999875 468999999999998
Q ss_pred HHH
Q 029829 162 LFK 164 (187)
Q Consensus 162 l~~ 164 (187)
+..
T Consensus 170 ~~~ 172 (190)
T 1hzt_A 170 EAR 172 (190)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 5
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.91 E-value=1.6e-23 Score=162.89 Aligned_cols=135 Identities=17% Similarity=0.146 Sum_probs=109.2
Q ss_pred CCCCceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCC
Q 029829 2 HKCVPNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVD 81 (187)
Q Consensus 2 ~g~~h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~ 81 (187)
.+..|+++++++++.+|+|||++|+..+..+||+|++|+||++++||+ +.+||+||+.||||+.+..+
T Consensus 33 ~~~~~~~~~v~i~~~~~~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~---------~~~aa~REl~EEtGl~~~~~--- 100 (180)
T 2fkb_A 33 QCLRHRATYIVVHDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQ---------LLESARREAEEELGIAGVPF--- 100 (180)
T ss_dssp HTCCEEEEEEEEECSSSCEEEEEECSSCSSSTTCEESSBCCBCBTTCC---------HHHHHHHHHHHHHCCBSCCC---
T ss_pred cCceeeEEEEEEECCCCEEEEEECCCCCccCCCcEEeecCCCCCCCCC---------HHHHHHHHHHHHHCCCccce---
Confidence 478899999999999999999999887777899999977899999999 89999999999999987643
Q ss_pred CeeeeeEEEEEccCCCCcceeEEEEEEEEecCCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHH
Q 029829 82 EFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNF 161 (187)
Q Consensus 82 ~l~~~~~~~y~~~~~~~~~e~e~~~vf~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~ 161 (187)
.+++.+.+.... .+...++|.+.....+.++++|+.+++|++++++.+++. .++|..+.++..|
T Consensus 101 --~~l~~~~~~~~~-----~~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~---------~~~~~~~~~l~~~ 164 (180)
T 2fkb_A 101 --AEHGQFYFEDKN-----CRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITARCD---------EFTPDSLKALALW 164 (180)
T ss_dssp --EEEEEEEEEETT-----EEEEEEEEEEECCCCCCCCTTTEEEEEEECHHHHHTTGG---------GBCHHHHHHHHHH
T ss_pred --EEEEEEEecCCC-----ceEEEEEEEEecCCCcCCChhHhheEEEecHHHHHHHHH---------HhCCcHHHHHHHH
Confidence 456666554321 144667787776556667788999999999999997643 3778888888877
Q ss_pred HHH
Q 029829 162 LFK 164 (187)
Q Consensus 162 l~~ 164 (187)
+..
T Consensus 165 ~~~ 167 (180)
T 2fkb_A 165 MKR 167 (180)
T ss_dssp HHH
T ss_pred HHh
Confidence 543
No 6
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.89 E-value=5.8e-22 Score=150.25 Aligned_cols=143 Identities=16% Similarity=0.064 Sum_probs=105.7
Q ss_pred CCCCceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCC
Q 029829 2 HKCVPNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVD 81 (187)
Q Consensus 2 ~g~~h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~ 81 (187)
....|.+|++++++.+|+|||+||+..+..++|.|++| ||++++||+ +.+||+||+.||||+.+....
T Consensus 4 ~~~~~~~v~~vi~~~~~~vLL~~r~~~~~~~~g~w~~P-gG~ve~gE~---------~~~aa~REl~EE~Gl~~~~~~-- 71 (153)
T 3grn_A 4 EKPYIISVYALIRNEKGEFLLLRRSENSRTNAGKWDLP-GGKVNPDES---------LKEGVAREVWEETGITMVPGD-- 71 (153)
T ss_dssp SSCEEEEEEEEEECTTCCEEEEEECTTCSSSTTCEECS-EEECCTTCC---------HHHHHHHHHHHHHCCCCCCCS--
T ss_pred CCceEEEEEEEEEcCCCcEEEEEEcCCCCCCCCeEECc-eeecCCCCC---------HHHHHHhhhhhhhCcEeecce--
Confidence 34568899999999999999999998766799999998 799999999 899999999999999987543
Q ss_pred CeeeeeEEEEEccCCCCcceeEEEEEEEEec-CCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHH
Q 029829 82 EFTPLGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDN 160 (187)
Q Consensus 82 ~l~~~~~~~y~~~~~~~~~e~e~~~vf~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~ 160 (187)
+++.+.+..+. .+...++|.+.. +..+.++ +|+.+++|++++++.++ ..+.|+.+.+++.
T Consensus 72 ---~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~e~~~~~W~~~~el~~~----------~~~~~~~~~~l~~ 132 (153)
T 3grn_A 72 ---IAGQVNFELTE-----KKVIAIVFDGGYVVADVKLS-YEHIEYSWVSLEKILGM----------ETLPAYFRDFFER 132 (153)
T ss_dssp ---EEEEEEEECSS-----CEEEEEEEEEEECCCCCCCC-TTEEEEEEECHHHHTTC----------SSSCHHHHHHHHH
T ss_pred ---EEEEEEEecCC-----ceEEEEEEEEEecCCcEecC-CCcceEEEEEHHHhhhc----------ccchHHHHHHHHH
Confidence 46665554432 134556676654 3444443 79999999999999753 1288999999999
Q ss_pred HHHHHHhHhcccccc
Q 029829 161 FLFKWWDHLEKGTLN 175 (187)
Q Consensus 161 ~l~~~~~~~~~~~~~ 175 (187)
++..-..-..++++.
T Consensus 133 l~~~~~~e~~~~~~~ 147 (153)
T 3grn_A 133 FDRENKKPSKLFIEG 147 (153)
T ss_dssp HHHHHTC--------
T ss_pred HhccccCCCCccccc
Confidence 877766555555543
No 7
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.87 E-value=1.2e-20 Score=143.09 Aligned_cols=121 Identities=20% Similarity=0.181 Sum_probs=94.9
Q ss_pred CCCCceEEEEEEEeCCCeEEEEEecCC--CCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCC
Q 029829 2 HKCVPNIFSILGFVSYSVMSGQQRSGT--KVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVP 79 (187)
Q Consensus 2 ~g~~h~av~v~i~~~~g~vLL~rRs~~--k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~ 79 (187)
+...|+++++++++.+|++||+||+.. +..++|.|++| ||++++||+ +.+||+||+.||||+.+...
T Consensus 9 ~~~~~~~~~~vi~~~~~~vLl~~r~~~~~~~~~~~~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~~- 77 (159)
T 1sjy_A 9 VPVELRAAGVVLLNERGDILLVQEKGIPGHPEKAGLWHIP-SGAVEDGEN---------PQDAAVREACEETGLRVRPV- 77 (159)
T ss_dssp CCCCEEEEEEEEBCTTCCEEEEEESCC----CCCCCEECS-EEECCTTSC---------HHHHHHHHHHHHHSCCEEEE-
T ss_pred CCeEEEeEEEEEEeCCCCEEEEEecccCcCCCCCCeEECC-ccccCCCCC---------HHHHHHHHHHHHHCccceee-
Confidence 356789999999998899999999852 44689999997 799999999 89999999999999998643
Q ss_pred CCCeeeeeEEEEEccCCCCcceeEEEEEEEEec-CCc-CCC-CccccceEEEecHHHHHHHHHhc
Q 029829 80 VDEFTPLGRILYKAPSDGKWGEHELDYLLFIVR-DVS-VNP-NPDEVAEYKYVNREQLKELLRKA 141 (187)
Q Consensus 80 ~~~l~~~~~~~y~~~~~~~~~e~e~~~vf~~~~-~~~-~~~-~~~Ev~~~~Wv~~~el~~~l~~~ 141 (187)
.+++.+.+..+. + .+...++|.+.. +.. +.+ +++|+.+++|++++++.+++..+
T Consensus 78 ----~~l~~~~~~~~~--~--~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 134 (159)
T 1sjy_A 78 ----KFLGAYLGRFPD--G--VLILRHVWLAEPEPGQTLAPAFTDEIAEASFVSREDFAQLYAAG 134 (159)
T ss_dssp ----EEEEEEEEECTT--S--CEEEEEEEEEEECSSCCCCCCCCSSEEEEEEECHHHHHHHHHTT
T ss_pred ----EEEEEEecccCC--C--ceEEEEEEEEEccCCCccccCCCCceeEEEEecHHHHHHhhhcc
Confidence 456665544322 2 245667777765 333 555 67899999999999999998865
No 8
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.87 E-value=3e-21 Score=148.86 Aligned_cols=118 Identities=15% Similarity=0.183 Sum_probs=94.2
Q ss_pred ceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCeee
Q 029829 6 PNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 85 (187)
Q Consensus 6 h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~ 85 (187)
|+++++++++.+|++||+||+..+..+||.|++.+||++++||+ +.+||+||+.||||+.+.... +.+
T Consensus 34 ~~~v~v~i~~~~~~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs---------~~~aa~REl~EEtGl~~~~~~---l~~ 101 (171)
T 1q27_A 34 VRVVNAFLRNSQGQLWIPRRSPSKSLFPNALDVSVGGAVQSGET---------YEEAFRREAREELNVEIDALS---WRP 101 (171)
T ss_dssp CEEEEEEEEETTTEEEECCSCCSSSCCCCSCCCSEEEECSSSSC---------HHHHHHHHHHHHHSCTTSSSC---EEE
T ss_pred ceEEEEEEECCCCeEEEEEecCCCCCCCCccccccCccccCCCC---------HHHHHHHHHHHHHCCcccccc---eEE
Confidence 88999999999999999999887777899999445899999999 899999999999999987542 455
Q ss_pred eeEEE-EEccCCCCcceeEEEEEEEEecCCcCCCCccccceEEEecHHHHHHHHHhc
Q 029829 86 LGRIL-YKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKA 141 (187)
Q Consensus 86 ~~~~~-y~~~~~~~~~e~e~~~vf~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~ 141 (187)
++.+. |..+ . +...++|.+..+..+.++++|+.+++|++++++.+++...
T Consensus 102 ~~~~~~~~~~--~----~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 152 (171)
T 1q27_A 102 LASFSPFQTT--L----SSFMCVYELRSDATPIFNPNDISGGEWLTPEHLLARIAAG 152 (171)
T ss_dssp EEEECSSSSC--C----SSEEEEEEEECCCCCCSCTTTCSCCEEECHHHHHHHHHHH
T ss_pred EEEEeccCCC--C----ccEEEEEEEEECCccccCchhhheEEEecHHHHHHHHhcC
Confidence 65543 2221 1 1266777777655566777899999999999999887754
No 9
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.85 E-value=8e-21 Score=145.63 Aligned_cols=136 Identities=17% Similarity=0.141 Sum_probs=88.1
Q ss_pred CCCCceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCC
Q 029829 2 HKCVPNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVD 81 (187)
Q Consensus 2 ~g~~h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~ 81 (187)
.++.|+++.+++++.+|+|||+||+..+..+||.|++| ||++++||+ +.+||+||+.||||+.+....+.
T Consensus 23 ~~~~~~~~~~~ii~~~~~vLL~~r~~~~~~~~g~w~lP-gG~ve~gE~---------~~~aa~REl~EEtGl~~~~~~~~ 92 (165)
T 3oga_A 23 NAMRQRTIVCPLIQNDGCYLLCKMADNRGVFPGQWALS-GGGVEPGER---------IEEALRREIREELGEQLILSDIT 92 (165)
T ss_dssp -CCEEEEEEEEEEEETTEEEEEEECC------CCEECC-CEECCTTCC---------HHHHHHHHHHHHHCSSCCEEEEE
T ss_pred CCcceEEEEEEEEeCCCEEEEEEecCCCCCCCCeEECC-ccccCCCCC---------HHHHHHHHHHHHhCCCcccccee
Confidence 45789999999999899999999997777899999998 699999999 89999999999999998653321
Q ss_pred CeeeeeEE-EEEccCCCCcce-eEEEEEEEEec-CCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHH
Q 029829 82 EFTPLGRI-LYKAPSDGKWGE-HELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVV 158 (187)
Q Consensus 82 ~l~~~~~~-~y~~~~~~~~~e-~e~~~vf~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~ 158 (187)
.+.+...+ .+.++. ..... +.+.++|.+.. +..+..+ +|+.+++|++++++.++ .+.|..+.++
T Consensus 93 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~E~~~~~W~~~~el~~~-----------~~~~~~~~~l 159 (165)
T 3oga_A 93 PWTFRDDIRIKTYAD-GRQEEIYMIYLIFDCVSANRDICIN-DEFQDYAWVKPEELALY-----------DLNVATRHTL 159 (165)
T ss_dssp EEEEEEEEEEEEC---CCEEEEEEEEEEEEEEESCCCCCCC-TTEEEEEEECGGGGGGS-----------CBCHHHHHHH
T ss_pred eeeeecceeeEecCC-CCceeEEEEEEEEEeeccCCCccCC-chheeeEEccHHHHhhC-----------CCCHHHHHHH
Confidence 11111111 122222 11111 11224444443 3334443 79999999999999863 5777777666
Q ss_pred HH
Q 029829 159 DN 160 (187)
Q Consensus 159 ~~ 160 (187)
+.
T Consensus 160 ~~ 161 (165)
T 3oga_A 160 AL 161 (165)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 10
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.85 E-value=1e-20 Score=141.81 Aligned_cols=122 Identities=17% Similarity=0.111 Sum_probs=88.8
Q ss_pred ceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCeee
Q 029829 6 PNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 85 (187)
Q Consensus 6 h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~ 85 (187)
|.+++++|++ +|+|||+||.. |.|++| ||++++||+ +.+||+||++||||+.+... .+
T Consensus 4 ~~aag~vv~~-~~~vLL~~r~~------g~W~~P-gG~ve~gEt---------~~~aa~RE~~EEtGl~~~~~-----~~ 61 (134)
T 3i7u_A 4 EFSAGGVLFK-DGEVLLIKTPS------NVWSFP-KGNIEPGEK---------PEETAVREVWEETGVKGEIL-----DY 61 (134)
T ss_dssp EEEEEEEEEE-TTEEEEEECTT------SCEECC-EEECCTTCC---------HHHHHHHHHHHHHSEEEEEE-----EE
T ss_pred EEEEEEEEEE-CCEEEEEEeCC------CcEECC-eeEecCCCC---------HHHHHHHHHHHhcCceEEEe-----ee
Confidence 5577777776 58999998853 678887 699999999 89999999999999998643 45
Q ss_pred eeEEEEEccCCCCcceeEEEEEEEEec-CCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHHH
Q 029829 86 LGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL 162 (187)
Q Consensus 86 ~~~~~y~~~~~~~~~e~e~~~vf~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~l 162 (187)
++.+.|.++..+... +..+++|.+.. +..+.++ +|+.+++|++++++.+++ .-|..+.+++.++
T Consensus 62 l~~~~~~~~~~~~~~-~~~~~~f~~~~~~~~~~~~-~E~~~~~W~~~~e~~~~l-----------~~~~~r~il~~a~ 126 (134)
T 3i7u_A 62 IGEIHYWYTLKGERI-FKTVKYYLMKYKEGEPRPS-WEVKDAKFFPIKEAKKLL-----------KYKGDKEIFEKAL 126 (134)
T ss_dssp EEEEEEEEEETTEEE-EEEEEEEEEEEEEECCCCC-TTSSEEEEEEHHHHHHHB-----------CSHHHHHHHHHHH
T ss_pred eeeeeEEecCCCceE-EEEEEEEEEEEcCCcCcCC-hhheEEEEEEHHHHhhhc-----------CChHHHHHHHHHH
Confidence 676666554433222 33445566654 3455555 799999999999998763 2355677777664
No 11
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.83 E-value=5.7e-20 Score=137.26 Aligned_cols=124 Identities=13% Similarity=0.027 Sum_probs=87.9
Q ss_pred ceEEEEEEEeCCCeEEEEEecCCCCC-CCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCee
Q 029829 6 PNIFSILGFVSYSVMSGQQRSGTKVT-FPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 84 (187)
Q Consensus 6 h~av~v~i~~~~g~vLL~rRs~~k~~-~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~ 84 (187)
..++++++++ +|+|||+||+..+.. ++|.|++| ||++++||+ +.+||+||+.||||+.+... .
T Consensus 6 ~~~v~~vi~~-~~~vLL~~r~~~~~~~~~g~w~lP-gG~ve~gE~---------~~~aa~REl~EE~Gl~~~~~-----~ 69 (140)
T 3gwy_A 6 IEVVAAVIRL-GEKYLCVQRGQTKFSYTSFRYEFP-GGKVEEGES---------LQEALQREIMEEMDYVIEVG-----E 69 (140)
T ss_dssp EEEEEEEEEE-TTEEEEEEC---------CCEECS-EEECCTTCC---------HHHHHHHHHHHHHCCCEEEE-----E
T ss_pred EEEEEEEEEe-CCEEEEEEecCCCCCCCCCeEECC-CccCCCCCC---------HHHHHHHHHHHhhCcEEEec-----e
Confidence 3456666666 799999999876532 89999998 699999999 89999999999999988653 4
Q ss_pred eeeEEEEEccCCCCcceeEEEEEEEEecCCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHHH
Q 029829 85 PLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL 162 (187)
Q Consensus 85 ~~~~~~y~~~~~~~~~e~e~~~vf~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~l 162 (187)
+++.+.+..+. .+...++|.+..... .++.+|+.+++|++++++.++ .+.|..+.+++.+.
T Consensus 70 ~~~~~~~~~~~-----~~~~~~~f~~~~~~~-~~~~~E~~~~~W~~~~el~~~-----------~~~~~~~~il~~~~ 130 (140)
T 3gwy_A 70 KLLTVHHTYPD-----FEITMHAFLCHPVGQ-RYVLKEHIAAQWLSTREMAIL-----------DWAEADKPIVRKIS 130 (140)
T ss_dssp EEEEEECCCSS-----CCEEEEEEEEEECCS-CCCCCSSCEEEEECHHHHTTS-----------CBCGGGHHHHHHHH
T ss_pred EEEEEEEEeCC-----ceEEEEEEEEEecCC-cccccccceeEeccHHHHhhC-----------CCCcccHHHHHHHH
Confidence 46655443321 134567777765322 344579999999999998853 67888888888774
No 12
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.83 E-value=3.1e-19 Score=132.27 Aligned_cols=113 Identities=18% Similarity=0.125 Sum_probs=84.1
Q ss_pred CceEEEEEEEeC---CCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCC
Q 029829 5 VPNIFSILGFVS---YSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVD 81 (187)
Q Consensus 5 ~h~av~v~i~~~---~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~ 81 (187)
.++++++++++. +++|||+||+. .+|.|++| ||++++||+ +.+||+||+.||||+.+..+.+
T Consensus 2 ~~~~~~~vi~~~~~~~~~vLl~~r~~----~~~~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~~~~- 66 (138)
T 1ktg_A 2 VVKAAGLVIYRKLAGKIEFLLLQASY----PPHHWTPP-KGHVDPGED---------EWQAAIRETKEEANITKEQLTI- 66 (138)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEESS----TTCCEESS-EEECCTTCC---------HHHHHHHHHHHHHCCCGGGEEE-
T ss_pred ceEEEEEEEEEecCCCcEEEEEEccC----CCCcEeCC-ccccCCCCC---------HHHHHHHHHHHHHCCCccceEE-
Confidence 578899999876 46899999873 36899997 799999999 8999999999999997765432
Q ss_pred Ce-eeeeEEEEEccCCCCcceeEEEEEEEEecCC-cCCCCccccceEEEecHHHHHHHH
Q 029829 82 EF-TPLGRILYKAPSDGKWGEHELDYLLFIVRDV-SVNPNPDEVAEYKYVNREQLKELL 138 (187)
Q Consensus 82 ~l-~~~~~~~y~~~~~~~~~e~e~~~vf~~~~~~-~~~~~~~Ev~~~~Wv~~~el~~~l 138 (187)
+ .+++.+.|..+ ..+...++|.+.... ....+++|+.+++|++++++.+++
T Consensus 67 -~~~~~~~~~~~~~-----~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~ 119 (138)
T 1ktg_A 67 -HEDCHETLFYEAK-----GKPKSVKYWLAKLNNPDDVQLSHEHQNWKWCELEDAIKIA 119 (138)
T ss_dssp -EEEEEEEEEEEET-----TEEEEEEEEEEEECSCCCCCCCTTEEEEEEECHHHHHHHH
T ss_pred -eccccceEEEEeC-----CCceEEEEEEEEecCCcccCCCchhcEeEeccHHHHHHhh
Confidence 1 23444445433 114456677776533 344567899999999999999864
No 13
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.83 E-value=8.9e-20 Score=136.12 Aligned_cols=128 Identities=17% Similarity=0.084 Sum_probs=96.6
Q ss_pred CCceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCe
Q 029829 4 CVPNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEF 83 (187)
Q Consensus 4 ~~h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l 83 (187)
..++++++++++.+|+|||+||+..+ .++|.|++| ||++++||+ +.+||+||+.||||+.+.... +
T Consensus 6 ~~~~~~~~vi~~~~~~vLl~~r~~~~-~~~g~w~lP-gG~ve~gE~---------~~~aa~RE~~EE~Gl~~~~~~---~ 71 (144)
T 3r03_A 6 PILLVTAAALIDPDGRVLLAQRPPGK-SLAGLWEFP-GGKLEPGET---------PEAALVRELAEELGVDTRASC---L 71 (144)
T ss_dssp CEEEEEEEEEBCTTSCEEEEECCTTS-SSTTCEECS-EEECCTTCC---------HHHHHHHHHHHHHCCBCCGGG---C
T ss_pred ceeEEEEEEEEcCCCEEEEEEeCCCC-CCCCcEECC-CcEecCCCC---------HHHHHHHHHHHHhCceeeccc---e
Confidence 45778888999989999999998665 489999997 799999999 899999999999999987643 2
Q ss_pred eeeeEEEEEccCCCCcceeEEEEEEEEecCCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHHH
Q 029829 84 TPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL 162 (187)
Q Consensus 84 ~~~~~~~y~~~~~~~~~e~e~~~vf~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~l 162 (187)
..++.+.+.... .+...++|.+..... .++..|+.+++|++++++.++ .+.|..+.+++.+.
T Consensus 72 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~-----------~~~~~~~~~l~~~~ 133 (144)
T 3r03_A 72 APLAFASHSYDT-----FHLLMPLYACRSWRG-RATAREGQTLAWVRAERLREY-----------PMPPADLPLIPILQ 133 (144)
T ss_dssp EEEEEEEEECSS-----SEEEEEEEEECCCBS-CCCCCSSCEEEEECGGGGGGS-----------CCCTTTTTHHHHHH
T ss_pred EEEEeeeccCCC-----eEEEEEEEEEEecCC-ccCCCCcceEEEEeHHHhccC-----------CCCcchHHHHHHHh
Confidence 334444443321 134557777765322 344678999999999998763 57777788777763
No 14
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.83 E-value=3.8e-19 Score=132.92 Aligned_cols=131 Identities=14% Similarity=0.111 Sum_probs=91.1
Q ss_pred ceEEEEEEEeCC-CeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCee
Q 029829 6 PNIFSILGFVSY-SVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 84 (187)
Q Consensus 6 h~av~v~i~~~~-g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~ 84 (187)
+.++++++++.+ |++||+||+.. ||.|++| ||++++||+ +.+||+||+.||||+.+....+.-+.
T Consensus 9 ~~~v~~~i~~~~~~~vLl~~r~~~----~g~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~~~~~~~~ 74 (150)
T 2o1c_A 9 PVSILVVIYAQDTKRVLMLQRRDD----PDFWQSV-TGSVEEGET---------APQAAMREVKEEVTIDVVAEQLTLID 74 (150)
T ss_dssp SEEEEEEEEETTTCEEEEEECSSS----TTCEESE-EEECCTTCC---------HHHHHHHHHHHHHCCCHHHHTCCEEE
T ss_pred ceEEEEEEEeCCCCEEEEEEecCC----CCceECC-ccccCCCCC---------HHHHHHHHHHHHhCCCccccceeEEe
Confidence 468899999875 89999998754 7999997 799999999 89999999999999998753221111
Q ss_pred eeeEEEEEc------cCCCCcceeEEEEEEEEecCCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHH
Q 029829 85 PLGRILYKA------PSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVV 158 (187)
Q Consensus 85 ~~~~~~y~~------~~~~~~~e~e~~~vf~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~ 158 (187)
......|.. ...++. .+...++|.+........+.+|+.+++|++++++.++ .+.|..+.++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~el~~~-----------~~~~~~~~~l 142 (150)
T 2o1c_A 75 CQRTVEFEIFSHLRHRYAPGV-TRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAAL-----------TKSWSNRQAI 142 (150)
T ss_dssp EEEEEEEECCGGGGGGBCTTC-CEEEEEEEEEEESSCCCCCCSSSSCEEEEEHHHHHHH-----------CSCHHHHHHH
T ss_pred eeceeeeeeecccccccCCCC-cceEEEEEEEEcCCCCCcChhHhhccEeecHHHHHhh-----------hcCHHHHHHH
Confidence 122222311 111111 1456677777654332334489999999999999975 4666677777
Q ss_pred HHHH
Q 029829 159 DNFL 162 (187)
Q Consensus 159 ~~~l 162 (187)
+.++
T Consensus 143 ~~~~ 146 (150)
T 2o1c_A 143 EQFV 146 (150)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 7663
No 15
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.82 E-value=2.4e-19 Score=136.01 Aligned_cols=129 Identities=11% Similarity=-0.001 Sum_probs=94.8
Q ss_pred ceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCeee
Q 029829 6 PNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 85 (187)
Q Consensus 6 h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~ 85 (187)
..+|++++++.+|+|||+||+.. .++|.|++| ||++++||+ +.+||+||+.||||+.+... .+.+
T Consensus 18 ~~~v~~vi~~~~~~vLl~~r~~~--~~~g~w~~P-gG~ve~gE~---------~~~aa~REl~EEtGl~~~~~---~~~~ 82 (160)
T 1rya_A 18 LVSLDFIVENSRGEFLLGKRTNR--PAQGYWFVP-GGRVQKDET---------LEAAFERLTMAELGLRLPIT---AGQF 82 (160)
T ss_dssp EEEEEEEEECTTSCEEEEEECSS--SSTTSEECC-EEECCTTCC---------HHHHHHHHHHHHHSSCCCGG---GSEE
T ss_pred EEEEEEEEEcCCCEEEEEeccCC--CCCCEEECC-ccccCCCCC---------HHHHHHHHHHHHHCCCCCcc---cceE
Confidence 45888999998899999999863 369999998 799999999 89999999999999986421 2355
Q ss_pred eeEEEEEccCC---CCcceeEEEEEEEEecC-CcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHH
Q 029829 86 LGRILYKAPSD---GKWGEHELDYLLFIVRD-VSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVD 159 (187)
Q Consensus 86 ~~~~~y~~~~~---~~~~e~e~~~vf~~~~~-~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~ 159 (187)
++.+.+..+.. .....+.+.++|.+... ..+.++.+|+.+++|++++++.++ ..+.|+.+.++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~----------~~~~~~~~~~l~ 150 (160)
T 1rya_A 83 YGVWQHFYDDNFSGTDFTTHYVVLGFRFRVSEEELLLPDEQHDDYRWLTSDALLAS----------DNVHANSRAYFL 150 (160)
T ss_dssp EEEEEEEESSBTTBSSSCEEEEEEEEEEECCGGGCCCCSSSEEEEEEECHHHHHHC----------TTBCHHHHGGGC
T ss_pred EEEEeEEEcccccCCCcCcEEEEEEEEEEcCccccccCCCccceEEEecHHHHhhc----------cccCHHHHHHHH
Confidence 66665544321 11122456677777653 445566789999999999999873 346676665544
No 16
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.82 E-value=1.5e-19 Score=133.15 Aligned_cols=123 Identities=16% Similarity=0.077 Sum_probs=90.3
Q ss_pred ceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCeee
Q 029829 6 PNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 85 (187)
Q Consensus 6 h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~ 85 (187)
+.++++++++ +|+|||+||+. |.|.+| ||++++||+ +.+||+||+.||||+.+... .+
T Consensus 4 ~~~~~~vi~~-~~~vLl~~r~~------~~w~~P-gG~ve~gE~---------~~~aa~RE~~EE~Gl~~~~~-----~~ 61 (134)
T 2pbt_A 4 EFSAGGVLFK-DGEVLLIKTPS------NVWSFP-KGNIEPGEK---------PEETAVREVWEETGVKGEIL-----DY 61 (134)
T ss_dssp EEEEEEEEEE-TTEEEEEECTT------SCEECC-EEECCTTCC---------HHHHHHHHHHHHHSEEEEEE-----EE
T ss_pred ceEEEEEEEE-CCEEEEEEeCC------CcEECC-ccccCCCCC---------HHHHHHHHHHHHHCCccEEe-----ee
Confidence 3577888888 68999999864 899987 699999999 89999999999999998753 45
Q ss_pred eeEEEEEccCCCCcceeEEEEEEEEec-CCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHHHH
Q 029829 86 LGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLF 163 (187)
Q Consensus 86 ~~~~~y~~~~~~~~~e~e~~~vf~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~l~ 163 (187)
++.+.+..+..+ ...+...++|.+.. +..+.++. |+.+++|++++++.++ ...|..+.++..++.
T Consensus 62 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-e~~~~~W~~~~el~~~-----------~~~~~~~~~l~~~~~ 127 (134)
T 2pbt_A 62 IGEIHYWYTLKG-ERIFKTVKYYLMKYKEGEPRPSW-EVKDAKFFPIKEAKKL-----------LKYKGDKEIFEKALK 127 (134)
T ss_dssp EEEEEEEEEETT-EEEEEEEEEEEEEEEEECCCCCT-TSSEEEEEEHHHHHHH-----------CCSHHHHHHHHHHHH
T ss_pred eeEEEEEeeCCC-cEEEEEEEEEEEEecCCCcCCCc-ceeEEEEEcHHHHHhh-----------hcchhHHHHHHHHHH
Confidence 666555544322 12244557777764 33444443 9999999999999975 355666777776643
No 17
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.82 E-value=2.2e-19 Score=133.12 Aligned_cols=128 Identities=15% Similarity=0.017 Sum_probs=95.1
Q ss_pred CCCceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCC
Q 029829 3 KCVPNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDE 82 (187)
Q Consensus 3 g~~h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~ 82 (187)
.+.|+.++++|++.+|+|||+||+..+ .++|.|++| ||++++||+ +.+||+||+.||||+.+...
T Consensus 5 ~~~~~~~~~~ii~~~~~vLl~~r~~~~-~~~g~w~lP-gG~ve~gE~---------~~~aa~RE~~EE~Gl~~~~~---- 69 (140)
T 2rrk_A 5 SMKMIEVVAAIIERDGKILLAQRPAQS-DQAGLWEFA-GGKVEPDES---------QRQALVRELREELGIEATVG---- 69 (140)
T ss_dssp TSCEEEEEEEEEEETTEEEEEECCSSC-SCCCCEECC-EEECCTTSC---------HHHHHHHHHHHHSCEEEECC----
T ss_pred CCccceEEEEEEEcCCEEEEEEcCCCC-CCCCEEECC-ceecCCCCC---------HHHHHHHHHHHHHCCeeecc----
Confidence 456777777777888999999997654 489999997 799999999 89999999999999998643
Q ss_pred eeeeeEEEEEccCCCCcceeEEEEEEEEecCCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHHH
Q 029829 83 FTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL 162 (187)
Q Consensus 83 l~~~~~~~y~~~~~~~~~e~e~~~vf~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~l 162 (187)
.+++.+.+..+. .+...++|.+..... .++.+|+.+++|++++++.++ .+.|..+.+++.++
T Consensus 70 -~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~-----------~~~~~~~~~l~~~~ 131 (140)
T 2rrk_A 70 -EYVASHQREVSG-----RIIHLHAWHVPDFHG-TLQAHEHQALVWCSPEEALQY-----------PLAPADIPLLEAFM 131 (140)
T ss_dssp -EEEEEEEEEETT-----EEEEEEEEEESEEEE-CCCCSSCSCEEEECHHHHTTS-----------CCCTTHHHHHHHHH
T ss_pred -cEEEEEEEecCC-----cEEEEEEEEEEeeCC-CcCCCccceeEEeCHHHHhhC-----------CCChhHHHHHHHHH
Confidence 446665554431 133456666653211 234578999999999998753 56777788887775
Q ss_pred H
Q 029829 163 F 163 (187)
Q Consensus 163 ~ 163 (187)
.
T Consensus 132 ~ 132 (140)
T 2rrk_A 132 A 132 (140)
T ss_dssp H
T ss_pred H
Confidence 4
No 18
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.81 E-value=4.5e-19 Score=133.92 Aligned_cols=126 Identities=17% Similarity=0.208 Sum_probs=92.9
Q ss_pred ceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCeee
Q 029829 6 PNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 85 (187)
Q Consensus 6 h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~ 85 (187)
|.+|++++ +.+|++||+||+. ..+|.|++| ||++++||+ +.+||+||+.||||+.+... .+
T Consensus 5 ~~~v~~ii-~~~~~vLl~~r~~---~~~~~w~~P-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~-----~~ 65 (153)
T 3shd_A 5 HVTVACVV-HAEGKFLVVEETI---NGKALWNQP-AGHLEADET---------LVEAAARELWEETGISAQPQ-----HF 65 (153)
T ss_dssp EEEEEEEE-EETTEEEEEEEEE---TTEEEEECS-EEECCTTCC---------HHHHHHHHHHHHHCCCCCCC-----EE
T ss_pred ceEEEEEE-EeCCEEEEEEecC---CCCCCEECC-eEEeCCCCC---------HHHHHHHHHHHHHCcccccC-----cE
Confidence 34444444 4578999999972 357899997 799999999 89999999999999998753 44
Q ss_pred eeEEEEEccCCCCcceeEEEEEEEEecC--CcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHHHH
Q 029829 86 LGRILYKAPSDGKWGEHELDYLLFIVRD--VSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLF 163 (187)
Q Consensus 86 ~~~~~y~~~~~~~~~e~e~~~vf~~~~~--~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~l~ 163 (187)
++.+.|..+. . .+...++|.+... ....++.+|+.+++|++++++. . .+....|..+..+.+|+.
T Consensus 66 ~~~~~~~~~~--~--~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~----~-----~~~~~~~~~~~~l~~~~~ 132 (153)
T 3shd_A 66 IRMHQWIAPD--K--TPFLRFLFAIELEQICPTQPHDSDIDCCRWVSAEEIL----Q-----ASNLRSPLVAESIRCYQS 132 (153)
T ss_dssp EEEEEECCTT--S--CCEEEEEEEEECSSCCCCCCCSTTCCEEEEECHHHHH----T-----CSCBSSTHHHHHHHHHHH
T ss_pred EEEEEEecCC--C--ceEEEEEEEEEccccCcCCCCcccceeeEEecHHHhh----c-----cccccCchHHHHHHHHHh
Confidence 6665555542 1 1445577777653 2356677899999999999992 1 135678888888888854
No 19
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.81 E-value=3e-19 Score=135.92 Aligned_cols=128 Identities=16% Similarity=0.090 Sum_probs=96.0
Q ss_pred CCceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCe
Q 029829 4 CVPNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEF 83 (187)
Q Consensus 4 ~~h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l 83 (187)
..++++++++++.+|+|||+||+..+ .++|.|++| ||++++||+ +.+||+||+.||||+.+.... +
T Consensus 27 ~~~~~~~~~i~~~~~~vLL~~r~~~~-~~~g~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~~~---~ 92 (158)
T 3hhj_A 27 SLLIVVACALLDQDNRVLLTQRPEGK-SLAGLWEFP-GGKVEQGET---------PEASLIRELEEELGVHVQADN---L 92 (158)
T ss_dssp CEEEEEEEEEBCTTSEEEEEECCCTT-SCCCCCBCC-EEECCTTCC---------HHHHHHHHHHHHHCCBCCGGG---C
T ss_pred ceEEEEEEEEEeCCCEEEEEEeCCCC-CCCCEEECC-ceeecCCCC---------HHHHHHHHHHHHhCcEeecce---E
Confidence 34678888899989999999998664 489999997 799999999 899999999999999987643 2
Q ss_pred eeeeEEEEEccCCCCcceeEEEEEEEEecCCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHHH
Q 029829 84 TPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL 162 (187)
Q Consensus 84 ~~~~~~~y~~~~~~~~~e~e~~~vf~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~l 162 (187)
..++.+.+..+. .+...++|.+..... .++..|..+++|++++++.++ .+.|..+.+++.++
T Consensus 93 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~-----------~~~~~~~~il~~~~ 154 (158)
T 3hhj_A 93 FPLTFASHGYET-----FHLLMPLYFCSHYKG-VAQGREGQNLKWIFINDLDKY-----------PMPEADKPLVQVLK 154 (158)
T ss_dssp EEEEEEEEECSS-----CEEEEEEEEESCCBS-CCCCTTSCEEEEEEGGGGGGS-----------CCCTTTHHHHHHHH
T ss_pred EEEEEEeeccCC-----cEEEEEEEEEEECCC-ccCCccccceEEEcHHHHhhC-----------CCCcchHHHHHHHH
Confidence 334444443321 134556777754322 345679999999999998753 56777788777764
No 20
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.81 E-value=7.2e-19 Score=128.34 Aligned_cols=118 Identities=21% Similarity=0.163 Sum_probs=87.7
Q ss_pred eEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCeeee
Q 029829 7 NIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPL 86 (187)
Q Consensus 7 ~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~~ 86 (187)
.++++++++.+|++||+||+. |.|++| ||++++||+ +.+||+||+.||||+.+... .++
T Consensus 3 ~~~~~vi~~~~~~vLl~~r~~------g~w~~P-gG~ve~gE~---------~~~aa~RE~~EE~Gl~~~~~-----~~~ 61 (126)
T 1vcd_A 3 LGAGGVVFNAKREVLLLRDRM------GFWVFP-KGHPEPGES---------LEEAAVREVWEETGVRAEVL-----LPL 61 (126)
T ss_dssp EEEEEEEECTTSCEEEEECTT------SCEECC-EECCCTTCC---------HHHHHHHHHHHHHCCEEEEE-----EEE
T ss_pred eEEEEEEEcCCCEEEEEEECC------CCccCC-cCcCCCCCC---------HHHHHHHHHHHhhCcEeeec-----cEE
Confidence 478889999889999999864 789997 799999999 89999999999999998643 456
Q ss_pred eEEEEEccCCCCcceeEEEEEEEEec-CCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHHH
Q 029829 87 GRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL 162 (187)
Q Consensus 87 ~~~~y~~~~~~~~~e~e~~~vf~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~l 162 (187)
+.+.|..+ .. +...++|.+.. +.. ..+.+|+.+++|++++++.++ ...|..+.+++.++
T Consensus 62 ~~~~~~~~---~~--~~~~~~~~~~~~~~~-~~~~~e~~~~~w~~~~el~~~-----------~~~~~~~~~l~~~~ 121 (126)
T 1vcd_A 62 YPTRYVNP---KG--VEREVHWFLMRGEGA-PRLEEGMTGAGWFSPEEARAL-----------LAFPEDLGLLEVAL 121 (126)
T ss_dssp EEEEEECT---TS--CEEEEEEEEEEEESC-CCCCTTCCEEEEECHHHHHHH-----------BCSHHHHHHHHHHH
T ss_pred eEEEEecC---Cc--eEEEEEEEEEEcCCC-CCCCcceeeeEEcCHHHHHHh-----------hcChhHHHHHHHHH
Confidence 66656542 12 23345555543 223 334579999999999999875 34555666666664
No 21
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.81 E-value=1.5e-19 Score=138.56 Aligned_cols=127 Identities=13% Similarity=0.059 Sum_probs=96.7
Q ss_pred CCceEEEEEEEeCC-CeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCC
Q 029829 4 CVPNIFSILGFVSY-SVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDE 82 (187)
Q Consensus 4 ~~h~av~v~i~~~~-g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~ 82 (187)
..|.++.++|++.+ |+|||+||+. ..|+|.|.+| ||++++||+ +.+||+||+.||||+.+...
T Consensus 8 ~~~~~v~~vi~~~~~~~vLL~~r~~--~~~~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~---- 71 (161)
T 3exq_A 8 PVELVTMVMVTDPETQRVLVEDKVN--VPWKAGHSFP-GGHVEVGEP---------CATAAIREVFEETGLRLSGV---- 71 (161)
T ss_dssp CEEEEEEEEEBCTTTCCEEEECCCC--CTTTCSBBCC-CCBCCTTSC---------HHHHHHHHHHHHHCCEESCC----
T ss_pred CceEEEEEEEEeCCCCEEEEEEccC--CCCCCCEEcc-ceecCCCCC---------HHHHHHHHHHHhhCcEecCC----
Confidence 45678888888877 7999999983 3588899887 799999999 89999999999999998753
Q ss_pred eeeeeEEEEEccCCCCcceeEEEEEEEEec-CCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHH
Q 029829 83 FTPLGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNF 161 (187)
Q Consensus 83 l~~~~~~~y~~~~~~~~~e~e~~~vf~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~ 161 (187)
.+++.+.+..+... .+...++|.+.. ... ++.+|..+++|++++++.++ .+.|..+.++..|
T Consensus 72 -~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~~~e~~~~~W~~~~el~~~-----------~~~~~~~~~l~~~ 134 (161)
T 3exq_A 72 -TFCGTCEWFDDDRQ---HRKLGLLYRASNFTGT--LKASAEGQLSWLPITALTRE-----------NSAASLPEFLQVF 134 (161)
T ss_dssp -EEEEEEEEECSSCS---SEEEEEEEEECCEESC--CCGGGTTTEEEECGGGCCTT-----------TBCTTHHHHHHHH
T ss_pred -cEEEEEecccCCCC---eEEEEEEEEEeccCCc--cCCCccceEEEeeHHHhhhC-----------ccChHHHHHHHHH
Confidence 45666655543221 144556776654 222 45678899999999998653 5778888888887
Q ss_pred HH
Q 029829 162 LF 163 (187)
Q Consensus 162 l~ 163 (187)
+.
T Consensus 135 ~~ 136 (161)
T 3exq_A 135 TG 136 (161)
T ss_dssp TT
T ss_pred hh
Confidence 54
No 22
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.80 E-value=6.8e-19 Score=132.54 Aligned_cols=126 Identities=10% Similarity=0.090 Sum_probs=91.5
Q ss_pred EEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCeeeee
Q 029829 8 IFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLG 87 (187)
Q Consensus 8 av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~~~ 87 (187)
++.++ ++.+|++||+||+.... +|.|++| ||++++||+ +.+||+||+.||||+.+... .+++
T Consensus 10 ~v~~i-i~~~~~vLl~~r~~~~~--~~~w~lP-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~~-----~~~~ 71 (153)
T 2b0v_A 10 TVAAV-IEQDDKYLLVEEIPRGT--AIKLNQP-AGHLEPGES---------IIQACSREVLEETGHSFLPE-----VLTG 71 (153)
T ss_dssp EEEEE-CEETTEEEEEEECSSSS--CCEEECS-EEECCTTSC---------HHHHHHHHHHHHHSEEEEEE-----EEEE
T ss_pred EEEEE-EeeCCEEEEEEEcCCCC--CCeEECC-CcCcCCCCC---------HHHHHHHHHHHhhCcEeccc-----eEEE
Confidence 34444 45578999999986543 8999998 799999999 89999999999999998743 4566
Q ss_pred EEEEEccCCCCcceeEEEEEEEEecC--CcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHHH
Q 029829 88 RILYKAPSDGKWGEHELDYLLFIVRD--VSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL 162 (187)
Q Consensus 88 ~~~y~~~~~~~~~e~e~~~vf~~~~~--~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~l 162 (187)
.+.|..+.. ..+.+.++|.+... .....+++|+.+++|++++++.++.. ....|..+.++..|+
T Consensus 72 ~~~~~~~~~---~~~~~~~~f~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~--------~~~~~~~~~~l~~~~ 137 (153)
T 2b0v_A 72 IYHWTCASN---GTTYLRFTFSGQVVSFDPDRKLDTGIVRAAWFSIDEIRAKQA--------MHRTPLVMQCIEDYH 137 (153)
T ss_dssp EEEEEETTT---TEEEEEEEEEEEEEEECTTSCCCTTEEEEEEEEHHHHHHTGG--------GBSSTHHHHHHHHHH
T ss_pred EEEEeCCCC---CcEEEEEEEEEEeCCCCCCCCCCCCeeeEEEecHHHHhhhhc--------ccCcHHHHHHHHHHH
Confidence 665555431 11335566766542 22245568999999999999998722 357788888777774
No 23
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.80 E-value=5e-19 Score=135.15 Aligned_cols=125 Identities=17% Similarity=0.114 Sum_probs=93.8
Q ss_pred CCceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCe
Q 029829 4 CVPNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEF 83 (187)
Q Consensus 4 ~~h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l 83 (187)
..|.+|+++|++ +|+|||+||+... ++|.|++| ||++++||+ +.+||+||+.|||||.+...
T Consensus 27 ~~~~~v~~vi~~-~~~vLL~~r~~~~--~~~~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~----- 88 (157)
T 4dyw_A 27 QPRVGCGAAIVR-DGRILLIKRKRAP--EAGCWGLP-GGKVDWLEP---------VERAVCREIEEELGIALERA----- 88 (157)
T ss_dssp CCEEEEEEEEEE-TTEEEEEEECSSS--STTCEECC-EEECCTTCC---------HHHHHHHHHHHHHSCEEESC-----
T ss_pred CceeEEEEEEEE-CCEEEEEEecCCC--CCCEEECC-cccCCCCCC---------HHHHHHHHHHHHHCcccccC-----
Confidence 456788888888 6999999998643 79999998 799999999 89999999999999998754
Q ss_pred eeeeEEEEEccCCCCcceeEEEEEEEEec-CCcC-CCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHH
Q 029829 84 TPLGRILYKAPSDGKWGEHELDYLLFIVR-DVSV-NPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNF 161 (187)
Q Consensus 84 ~~~~~~~y~~~~~~~~~e~e~~~vf~~~~-~~~~-~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~ 161 (187)
.+++.+.+..... ..+...++|.+.. +..+ ..+++|+.+++|++++++.+ .++|..+.+++.|
T Consensus 89 ~~~~~~~~~~~~~---~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~------------~l~~~~~~~l~~l 153 (157)
T 4dyw_A 89 TLLCVVDHIDAAN---GEHWVAPVYLAHAFSGEPRVVEPDRHEALGWFALDDLPQ------------PLTHATRIALEQV 153 (157)
T ss_dssp EEEEEEEEEETTT---TEEEEEEEEEESEEESCCCCSCTTTEEEEEEEETTSCCS------------SBCHHHHHHHHHH
T ss_pred cEEEEEEeeccCC---CcEEEEEEEEEEEcCCCcccCCCCcEeEEEEECHHHccc------------ccCHHHHHHHHHH
Confidence 3466554444321 1244556777654 2222 34568999999999999863 4778788877766
No 24
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.80 E-value=6.6e-19 Score=132.58 Aligned_cols=126 Identities=15% Similarity=0.097 Sum_probs=85.7
Q ss_pred CCCce-EEEEEEE---eCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCC
Q 029829 3 KCVPN-IFSILGF---VSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDV 78 (187)
Q Consensus 3 g~~h~-av~v~i~---~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~ 78 (187)
|+.+. +|.|+++ +.+|+|||+||+. +|.|.+| ||++++||+ +.+||+||+.||||+.+...
T Consensus 1 gm~~~~~v~vvi~~~~~~~~~vLl~~r~~-----~g~w~~P-gG~ve~gE~---------~~~aa~REl~EEtGl~~~~~ 65 (149)
T 3son_A 1 GMRQPFQVLVIPFIKTEANYQFGVLHRTD-----ADVWQFV-AGGGEDEEA---------ISETAKRESIEELNLDVDVK 65 (149)
T ss_dssp ---CCCEEEEEEEEECSSSEEEEEEEESS-----SSCEECE-EEECCTTCC---------HHHHHHHHHHHHHTCCSCCC
T ss_pred CCCCceEEEEEEEEecCCCeEEEEEEEcC-----CCCEeCC-ccccCCCCC---------HHHHHHHHHHHHhCCCcccc
Confidence 34443 5666665 4567999999975 3999987 799999999 89999999999999998752
Q ss_pred CCCCeeeeeEEEEEcc-----CCCCcceeEEEEEEEEecC---CcCCCCccccceEEEecHHHHHHHHHhccCCCCCccc
Q 029829 79 PVDEFTPLGRILYKAP-----SDGKWGEHELDYLLFIVRD---VSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKL 150 (187)
Q Consensus 79 ~~~~l~~~~~~~y~~~-----~~~~~~e~e~~~vf~~~~~---~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~ 150 (187)
. ..+..+ +..+ ..+. .+...++|.+... ..+.+ ++|+.+++|++++++.++ ..
T Consensus 66 ~----~~~~~~-~~~~~~~~~~~~~--~~~~~~~f~~~~~~~~~~~~~-~~E~~~~~W~~~~el~~~-----------~~ 126 (149)
T 3son_A 66 M----YSLDSH-ASIPNFHFSFNKP--YVVPEYCFAIDLTSCSYQVTL-SLEHSELRWVSYESAIQL-----------LE 126 (149)
T ss_dssp E----EEEEEE-EEEEGGGTCSSSC--SEEEEEEEEEECTTTGGGCCC-CTTEEEEEEECHHHHHHH-----------CC
T ss_pred e----EEEEee-ecccceeeccCCc--eEeEEEEEEEEcCCCCCcccC-CCceeeEEEeCHHHHHHH-----------hc
Confidence 1 112111 2111 1111 1344567777653 34555 489999999999999976 45
Q ss_pred ChhHHHHHHHHH
Q 029829 151 SPWFRLVVDNFL 162 (187)
Q Consensus 151 ~p~~~~~~~~~l 162 (187)
.|..+.++..+.
T Consensus 127 ~~~~~~~l~~~~ 138 (149)
T 3son_A 127 WDSNKTALYELN 138 (149)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 577777777663
No 25
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.80 E-value=8.6e-19 Score=131.11 Aligned_cols=126 Identities=17% Similarity=0.091 Sum_probs=87.0
Q ss_pred CceEEEEEEEeC-CCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCe
Q 029829 5 VPNIFSILGFVS-YSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEF 83 (187)
Q Consensus 5 ~h~av~v~i~~~-~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l 83 (187)
.|.+++++|++. +|+|||+||+ +|.|++| ||++++||+ +.+||+||+.||||+.+...
T Consensus 17 ~~~~~~~vi~~~~~~~vLl~~r~------~g~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~~----- 75 (148)
T 2azw_A 17 TRYAAYIIVSKPENNTMVLVQAP------NGAYFLP-GGEIEGTET---------KEEAIHREVLEELGISVEIG----- 75 (148)
T ss_dssp ECCEEEEECEEGGGTEEEEEECT------TSCEECS-EEECCTTCC---------HHHHHHHHHHHHHSEEEEEE-----
T ss_pred eeeEEEEEEECCCCCeEEEEEcC------CCCEeCC-CcccCCCCC---------HHHHHHHHHHHHhCCeeEee-----
Confidence 355788888886 6899999984 3899987 699999999 89999999999999998643
Q ss_pred eeeeEEE-EEccCCCCcceeEEEEEEEEecCCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHHH
Q 029829 84 TPLGRIL-YKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL 162 (187)
Q Consensus 84 ~~~~~~~-y~~~~~~~~~e~e~~~vf~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~l 162 (187)
..++.+. +..+.......+...++|.+........+.+|+.+++|++++++.++ .+.+..+.++..++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~-----------~~~~~~~~~l~~~~ 144 (148)
T 2azw_A 76 CYLGEADEYFYSNHRQTAYYNPGYFYVANTWRQLSEPLERTNTLHWVAPEEAVRL-----------LKRGSHRWAVEKWL 144 (148)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEECSSCC-CCSEEEEECHHHHHHH-----------BSCHHHHHHHHHHH
T ss_pred eEEEEEEEEEcCCCCCcceEEEEEEEEEEcCcCCcCCCCceeeEEEeeHHHHHhh-----------hcchhHHHHHHHHH
Confidence 3355432 22222211112445677777653222234478899999999999876 34455666666664
No 26
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.80 E-value=5.5e-19 Score=132.69 Aligned_cols=124 Identities=16% Similarity=0.036 Sum_probs=92.7
Q ss_pred ceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCeee
Q 029829 6 PNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 85 (187)
Q Consensus 6 h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~ 85 (187)
+..+++++++.+|+|||+||+..+ .++|.|++| ||++++||+ +.+||.||+.||||+.+.... .
T Consensus 21 ~~~~~~~i~~~~~~vLl~~r~~~~-~~~g~w~~P-gG~ve~gE~---------~~~aa~RE~~EE~Gl~~~~~~-----~ 84 (153)
T 3ees_A 21 WIPVVAGFLRKDGKILVGQRPENN-SLAGQWEFP-GGKIENGET---------PEEALARELNEELGIEAEVGE-----L 84 (153)
T ss_dssp EEEEEEEEEEETTEEEEEECCTTS-TTTTCEECS-EEECCTTCC---------HHHHHHHHHHHHHSCEEECCC-----E
T ss_pred eEEEEEEEEEECCEEEEEEeCCCC-CCCCeEECC-ceeeCCCCC---------HHHHHHHHHHHHHCCccccCc-----e
Confidence 667777788888999999998764 589999997 699999999 899999999999999987643 3
Q ss_pred eeEEEEEccCCCCcceeEEEEEEEEecCCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHHH
Q 029829 86 LGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL 162 (187)
Q Consensus 86 ~~~~~y~~~~~~~~~e~e~~~vf~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~l 162 (187)
++.+.+..+. .+...++|.+..... .++.+|+.+++|++++++.++ .+.|..+.+++.++
T Consensus 85 ~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~-----------~~~~~~~~~l~~~~ 144 (153)
T 3ees_A 85 KLACTHSYGD-----VGILILFYEILYWKG-EPRAKHHMMLEWIHPEELKHR-----------NIPEANRKILHKIY 144 (153)
T ss_dssp EEEEEEEETT-----EEEEEEEEEECEEES-CCCCSSSSEEEEECGGGGGGS-----------CCCHHHHTTHHHHH
T ss_pred EEEEEEecCC-----CeEEEEEEEEEECCC-CcCCCccceEEEecHHHhhhC-----------CCCcchHHHHHHHH
Confidence 5554444432 123446666654211 245679999999999998753 56677777777664
No 27
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.79 E-value=9e-19 Score=133.53 Aligned_cols=131 Identities=13% Similarity=0.086 Sum_probs=90.6
Q ss_pred CCCCCceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCC
Q 029829 1 MHKCVPNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPV 80 (187)
Q Consensus 1 ~~g~~h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~ 80 (187)
|.-..|.+++++|++ +|+|||+||+. +|.|.+| ||++++||+ +.+||+||++|||||.+.....
T Consensus 1 M~~~~~~~v~~vi~~-~~~vLL~~r~~-----~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~~~ 64 (159)
T 3f6a_A 1 MSLNRHFTVSVFIVC-KDKVLLHLHKK-----AKKMLPL-GGHIEVNEL---------PEEACIREAKEEAGLNVTLYNP 64 (159)
T ss_dssp --CCSCEEEEEEEEE-TTEEEEEECSS-----SCCEECE-EEECCTTCC---------HHHHHHHHHHHHHCCCCEECCC
T ss_pred CCCcceEEEEEEEEE-CCEEEEEEcCC-----CCeEECC-ccCccCCCC---------HHHHHHHHHHHHhCCCceeccc
Confidence 566789999999999 68999999863 6899887 799999999 8999999999999999876543
Q ss_pred CCee-----------e----eeEEEEEccCCCCcceeEEEEEEEEec-CCcCCCCccccceEEEecHHHHHHHHHhccCC
Q 029829 81 DEFT-----------P----LGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAG 144 (187)
Q Consensus 81 ~~l~-----------~----~~~~~y~~~~~~~~~e~e~~~vf~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~ 144 (187)
..+. . .....+..+ ...+.+.++|.+.. +..+.++++|+.+++|++++++.++
T Consensus 65 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~----~~~~~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~~------- 133 (159)
T 3f6a_A 65 IDINLKKSCDLSGEKLLINPIHTILGDVS----PNHSHIDFVYYATTTSFETSPEIGESKILKWYSKEDLKNA------- 133 (159)
T ss_dssp CCHHHHHHHHHTTCEEECCCSEEEEECSS----SSSCEEEEEEEEECSCSCCCCCTTSCCCEEEECSSSSTTC-------
T ss_pred ccccccccccccccccccCccccccccCC----CCceEEEEEEEEEeCCCCcCCCCCcccceEEeeHHHHhhC-------
Confidence 1000 0 000011111 11134556777765 4556667789999999999998854
Q ss_pred CCCcccChhHHHHHHHH
Q 029829 145 EEGLKLSPWFRLVVDNF 161 (187)
Q Consensus 145 ~~~~~~~p~~~~~~~~~ 161 (187)
..+.+..+.++..+
T Consensus 134 ---~~~~~~~~~l~~~~ 147 (159)
T 3f6a_A 134 ---HNIQENILVMATEA 147 (159)
T ss_dssp ---SSSCHHHHHHHHHH
T ss_pred ---cCCChhHHHHHHHH
Confidence 22455555655555
No 28
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.79 E-value=1.3e-19 Score=137.79 Aligned_cols=115 Identities=10% Similarity=-0.000 Sum_probs=79.3
Q ss_pred CCCceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCC
Q 029829 3 KCVPNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDE 82 (187)
Q Consensus 3 g~~h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~ 82 (187)
...|.++++++++.+|+|||++|+ +|.|++| ||++++||+ +.+||+||+.|||||.+...
T Consensus 18 ~~~~~~v~~ii~~~~~~vLL~~r~------~~~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~---- 77 (153)
T 3eds_A 18 LIFXPSVAAVIKNEQGEILFQYPG------GEYWSLP-AGAIELGET---------PEEAVVREVWEETGLKVQVK---- 77 (153)
T ss_dssp CEEEEEEEEEEBCTTCCEEEECC---------CBBCS-EEECCTTSC---------HHHHHHHHHHHHHCEEEEEE----
T ss_pred cEEeeeEEEEEEcCCCeEEEEEcC------CCcEECC-ccccCCCCC---------HHHHHHHHHHHHHCccceee----
Confidence 457889999999999999999987 7899987 699999999 89999999999999998753
Q ss_pred eeeeeEE-----EEEccCCCCcceeEEEEEEEEec-CCcCCCCccccceEEEecHHHHHHHHHh
Q 029829 83 FTPLGRI-----LYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRK 140 (187)
Q Consensus 83 l~~~~~~-----~y~~~~~~~~~e~e~~~vf~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~l~~ 140 (187)
..++.+ .+.++. +...+...++|.+.. ...+.++++|+.+++|++++++.++...
T Consensus 78 -~~~~~~~~~~~~~~~~~--~~~~~~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~l~~~ 138 (153)
T 3eds_A 78 -KQKGVFGGKEYRYTYSN--GDEVEYIVVVFECEVTSGELRSIDGESLKLQYFSLSEKPPLALP 138 (153)
T ss_dssp -EEEEEECSGGGEEECTT--SCEEEEEEEEEEEEEEEECCC-------CEEEECGGGCCCBSSC
T ss_pred -eEEEEecccceeeecCC--CCeEEEEEEEEEEEecCCccccCCCcEEEEEEECHHHCchhccc
Confidence 335443 233332 222234556777764 3455667789999999999999876543
No 29
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.79 E-value=1.3e-18 Score=137.77 Aligned_cols=132 Identities=11% Similarity=0.060 Sum_probs=85.2
Q ss_pred CCCceEEEEEEEeCCC-eEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCC-ccCCCC
Q 029829 3 KCVPNIFSILGFVSYS-VMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGIC-AEDVPV 80 (187)
Q Consensus 3 g~~h~av~v~i~~~~g-~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~-~~~~~~ 80 (187)
...|.+++++|++.+| +|||++|. .+|.|++| ||++++||+ +.+||+||+.||||+. +.....
T Consensus 42 ~~~h~~~~~vv~~~~~~~vLL~~r~-----~~g~w~lP-gG~ve~gEs---------~~eaa~REl~EEtGl~~~~~~~~ 106 (197)
T 3fcm_A 42 TIAHLTSSAFAVNKERNKFLMIHHN-----IYNSWAWT-GGHSDNEKD---------QLKVAIKELKEETGVKNPTPLLD 106 (197)
T ss_dssp SSEEEEEEEEEECTTSCEEEEEEET-----TTTEEECE-EEECTTCCB---------HHHHHHHHHHHHHCCSSCEESCS
T ss_pred CCccEEEEEEEEECCCCEEEEEEec-----CCCCEECC-ccccCCCCC---------HHHHHHHHHHHHHCCCcccccCC
Confidence 4679999999999886 99999986 46899998 799999999 8999999999999998 432211
Q ss_pred CCeeeeeEEEEEccCC---CCc---ceeEEEEEEEEec--CCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccCh
Q 029829 81 DEFTPLGRILYKAPSD---GKW---GEHELDYLLFIVR--DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSP 152 (187)
Q Consensus 81 ~~l~~~~~~~y~~~~~---~~~---~e~e~~~vf~~~~--~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p 152 (187)
. ...+.|..... .+. ....+..+|++.. ...+.++++|+.+++|++++++.+++ ..|
T Consensus 107 -~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~-----------~~~ 171 (197)
T 3fcm_A 107 -K---AFALDVLTVNGHIKRGKYVSSHLHLNLTYLIECSEDETLMLKEDENSGVMWIPFNEISKYC-----------SEP 171 (197)
T ss_dssp -S---CSEEEEEEECCEEETTEEECCEEEEEEEEEEECCTTSCCCCCC----CEEEEEGGGHHHHC-----------CCG
T ss_pred -C---ceEEEEeeecCccccCcccCCceeEEEEEEEEeCCCcccCCCcccccceEEccHHHHHhhc-----------CCH
Confidence 0 11111211111 000 0011224444443 33456778999999999999999874 345
Q ss_pred hHHHHHHHHHHH
Q 029829 153 WFRLVVDNFLFK 164 (187)
Q Consensus 153 ~~~~~~~~~l~~ 164 (187)
+.+.++..++..
T Consensus 172 ~~~~il~~~~~~ 183 (197)
T 3fcm_A 172 HMIPIYEKLINK 183 (197)
T ss_dssp GGHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555666666443
No 30
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.79 E-value=1.1e-18 Score=132.67 Aligned_cols=118 Identities=21% Similarity=0.257 Sum_probs=81.2
Q ss_pred CCCCceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCC
Q 029829 2 HKCVPNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVD 81 (187)
Q Consensus 2 ~g~~h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~ 81 (187)
.|.+|++|++++++.+|+|||+||+. +||.|++| ||++++||+ +.+||+||+.|||||.+..+
T Consensus 10 ~~~~~~~v~~~i~~~~~~vLl~~r~~----~~g~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~~--- 72 (165)
T 1f3y_A 10 PEGYRRNVGICLMNNDKKIFAASRLD----IPDAWQMP-QGGIDEGED---------PRNAAIRELREETGVTSAEV--- 72 (165)
T ss_dssp CSSCCCEEEEEEECTTSCEEEEEETT----EEEEEECC-EEECCTTCC---------HHHHHHHHHHHHHCCCSEEE---
T ss_pred ccceeeeEEEEEECCCCcEEEEecCC----CCCcEECC-eeccCCCCC---------HHHHHHHHHHHhhCCChhhh---
Confidence 46789999999999999999999973 57999998 699999999 89999999999999987521
Q ss_pred CeeeeeE--EEEEccCC----------CCcceeEEEEEEEEecC---CcCCC-----CccccceEEEecHHHHHHHHH
Q 029829 82 EFTPLGR--ILYKAPSD----------GKWGEHELDYLLFIVRD---VSVNP-----NPDEVAEYKYVNREQLKELLR 139 (187)
Q Consensus 82 ~l~~~~~--~~y~~~~~----------~~~~e~e~~~vf~~~~~---~~~~~-----~~~Ev~~~~Wv~~~el~~~l~ 139 (187)
..... +.|..+.. ..+. ....++|++... ..+.+ +++|+.+++|++++++.+++.
T Consensus 73 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 147 (165)
T 1f3y_A 73 --IAEVPYWLTYDFPPKVREKLNIQWGSDWK-GQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWSWVTPEQLIDLTV 147 (165)
T ss_dssp --EEECSSCCBCCCCHHHHHHHGGGSCSSCC-SCBEEEEEEEECSCGGGCCCCCCSSSCCSEEEEEEECHHHHHHHBC
T ss_pred --hcccccceeeecCcccccccccccccccc-CceEEEEEEEecCCcccccccCCCCCCChhheeEEecHHHHHHHhh
Confidence 11100 11211100 0000 112344444431 23333 357999999999999998753
No 31
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.79 E-value=2.8e-18 Score=130.55 Aligned_cols=113 Identities=17% Similarity=0.103 Sum_probs=76.3
Q ss_pred ceEEEEEEEe---------CCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcc
Q 029829 6 PNIFSILGFV---------SYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAE 76 (187)
Q Consensus 6 h~av~v~i~~---------~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~ 76 (187)
-||++++++. +++++||.||+.+ +|.|++| ||++++||+ +.+||+||+.||||+.+.
T Consensus 3 ~ra~G~iifr~~~~~~~~n~~~e~LL~~r~~~----~~~W~lP-gG~ve~gEt---------~~~aa~REl~EEtGl~~~ 68 (155)
T 3u53_A 3 LRACGLIIFRRCLIPKVDNNAIEFLLLQASDG----IHHWTPP-KGHVEPGED---------DLETALRETQEEAGIEAG 68 (155)
T ss_dssp -CEEEEEEEEECCCSSSSSCSEEEEEEEESSS----SCCEECS-EEECCSSCC---------HHHHHHHHHHHHHCCCGG
T ss_pred ceEeEEEEEccccccceeCCCcEEEEEEecCC----CCCEECC-eeeccCCCC---------HHHHHHHHHHHHHCCccc
Confidence 4688888873 4458999999753 5889997 799999999 899999999999999987
Q ss_pred CCCCCCeeeeeEEEEEccCCCCcceeEEEEEEEEec-C--CcCCCCccccceEEEecHHHHHHHHH
Q 029829 77 DVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVR-D--VSVNPNPDEVAEYKYVNREQLKELLR 139 (187)
Q Consensus 77 ~~~~~~l~~~~~~~y~~~~~~~~~e~e~~~vf~~~~-~--~~~~~~~~Ev~~~~Wv~~~el~~~l~ 139 (187)
... .++.+.+......... .....+|++.. + ..+.+ .+|+.+++|++++|+.+++.
T Consensus 69 ~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~E~~~~~W~~~~ea~~~~~ 127 (155)
T 3u53_A 69 QLT-----IIEGFKRELNYVARNK-PKTVIYWLAEVKDYDVEIRL-SHEHQAYRWLGLEEACQLAQ 127 (155)
T ss_dssp GEE-----EEEEEEEEEEEEETTE-EEEEEEEEEEESCTTCCCCC-CTTEEEEEEECHHHHHHHHC
T ss_pred cce-----eeeeEeeeeecCCCcc-eeEEEEEEEEEeccCCccCC-CcceeEEEEeEHHHHHHHcC
Confidence 532 2333322221111111 22333344432 2 23333 46999999999999988754
No 32
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.78 E-value=2e-18 Score=133.26 Aligned_cols=114 Identities=17% Similarity=0.161 Sum_probs=80.0
Q ss_pred Cce-EEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCe
Q 029829 5 VPN-IFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEF 83 (187)
Q Consensus 5 ~h~-av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l 83 (187)
.|+ +|++++++ +|++||.+|.... .++|.|++| ||++++||+ +.+||+||+.||||+ +.. +
T Consensus 32 ~~~~~v~vii~~-~~~vLL~~~~r~~-~~~~~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl-~~~-----~ 93 (170)
T 1v8y_A 32 EHKPAVAVIALR-EGRMLFVRQMRPA-VGLAPLEIP-AGLIEPGED---------PLEAARRELAEQTGL-SGD-----L 93 (170)
T ss_dssp EECCEEEEEEEE-TTEEEEEECCBTT-TTBCCBBCS-EEECCTTCC---------HHHHHHHHHHHHHSE-EEE-----E
T ss_pred ecCCeEEEEEEE-CCEEEEEEEEeCC-CCCCEEECC-ccccCCCCC---------HHHHHHHHHHHHHCC-CcC-----c
Confidence 344 88899999 8999998876443 578999997 799999999 899999999999999 653 3
Q ss_pred eeeeEEEEEccCCCCcceeEEEEEEEEec--CCcCCCCccccceEEEecHHHHHHHHHhc
Q 029829 84 TPLGRILYKAPSDGKWGEHELDYLLFIVR--DVSVNPNPDEVAEYKYVNREQLKELLRKA 141 (187)
Q Consensus 84 ~~~~~~~y~~~~~~~~~e~e~~~vf~~~~--~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~ 141 (187)
.+++.+. ..+ +.. +...++|.+.. .....++++|+.+++|++++++.+++..+
T Consensus 94 ~~l~~~~-~~~---~~~-~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 148 (170)
T 1v8y_A 94 TYLFSYF-VSP---GFT-DEKTHVFLAENLKEVEAHPDEDEAIEVVWMRPEEALERHQRG 148 (170)
T ss_dssp EEEEEEE-SCT---TTB-CCEEEEEEEEEEEECC--------CEEEEECHHHHHHHHHTT
T ss_pred eeeEEEe-cCC---Ccc-ccEEEEEEEEeccccCCCCCCCceEEEEEEEHHHHHHHHHCC
Confidence 4566542 211 111 33556666653 23445567899999999999999999875
No 33
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.77 E-value=4.8e-18 Score=128.06 Aligned_cols=115 Identities=18% Similarity=0.159 Sum_probs=77.0
Q ss_pred ceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCeee
Q 029829 6 PNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 85 (187)
Q Consensus 6 h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~ 85 (187)
..+|++++++.+|++||.+|.... ..++.|++| ||++++||+ +.+||+||++||||+.+.. +.+
T Consensus 5 ~~~v~vi~~~~~~~vLLv~~~r~~-~~~~~w~~P-gG~ve~gEt---------~~~aa~REl~EEtGl~~~~-----~~~ 68 (145)
T 2w4e_A 5 PRAVFILPVTAQGEAVLIRQFRYP-LRATITEIV-AGGVEKGED---------LGAAAARELLEEVGGAASE-----WVP 68 (145)
T ss_dssp CEEEEEEEEETTSEEEEEEEEETT-TTEEEEECE-EEECCTTCC---------HHHHHHHHHHHHHCEECSE-----EEE
T ss_pred CCEEEEEEEcCCCEEEEEEEEecC-CCCCEEEeC-CccCCCCCC---------HHHHHHHHHHHhhCCccCe-----EEE
Confidence 358889999999998775533221 245799997 699999999 8999999999999998864 234
Q ss_pred eeEEEEEccCCCCcceeEEEEEEEEec--CCcCCCCccccceEEEecHHHHHHHHHhc
Q 029829 86 LGRILYKAPSDGKWGEHELDYLLFIVR--DVSVNPNPDEVAEYKYVNREQLKELLRKA 141 (187)
Q Consensus 86 ~~~~~y~~~~~~~~~e~e~~~vf~~~~--~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~ 141 (187)
++.+ |..+ +.. ....++|++.. .....++++|+.+++|++++++.+++..+
T Consensus 69 l~~~-~~~~---~~~-~~~~~~f~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~ 121 (145)
T 2w4e_A 69 LPGF-YPQP---SIS-GVVFYPLLALGVTLGAAQLEDTETIERVVLPLAEVYRMLEAG 121 (145)
T ss_dssp CCCB-BSCT---TTC-CCEEEEEEEEEEEEC--------CEEEEEEEHHHHHHHHHHT
T ss_pred EecC-cCCC---Ccc-CceEEEEEEEecccCCCCCCCCCeEEEEEEeHHHHHHHHHcC
Confidence 5442 2111 111 23456666542 23445677899999999999999999875
No 34
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.77 E-value=4.2e-18 Score=132.62 Aligned_cols=114 Identities=16% Similarity=0.070 Sum_probs=87.5
Q ss_pred eEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCeeee
Q 029829 7 NIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPL 86 (187)
Q Consensus 7 ~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~~ 86 (187)
.+|++++++.+|++||++|... ..++|.|++| ||++++||+ +.+||+||+.||||+.+... .++
T Consensus 42 ~~v~v~i~~~~~~vLL~~r~~~-~~~~~~w~~P-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~-----~~l 105 (182)
T 2yvp_A 42 AASFVLPVTERGTALLVRQYRH-PTGKFLLEVP-AGKVDEGET---------PEAAARRELREEVGAEAETL-----IPL 105 (182)
T ss_dssp EEEEEEEBCTTSEEEEEEEEEG-GGTEEEEECC-EEECCTTCC---------HHHHHHHHHHHHHCEECSCE-----EEC
T ss_pred CEEEEEEEcCCCEEEEEEeccC-CCCCcEEEec-cccCCCCcC---------HHHHHHHHHHHHhCCCcccE-----EEE
Confidence 4888889999999999998754 3578999997 699999999 89999999999999988642 445
Q ss_pred eEEEEEccCCCCcceeEEEEEEEEec---CCcCCCCccccceEEEecHHHHHHHHHhc
Q 029829 87 GRILYKAPSDGKWGEHELDYLLFIVR---DVSVNPNPDEVAEYKYVNREQLKELLRKA 141 (187)
Q Consensus 87 ~~~~y~~~~~~~~~e~e~~~vf~~~~---~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~ 141 (187)
+.+.. . .+.. +..+++|++.. ...+..+++|+.+++|++++++.+++..+
T Consensus 106 ~~~~~--~--~~~~-~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 158 (182)
T 2yvp_A 106 PSFHP--Q--PSFT-AVVFHPFLALKARVVTPPTLEEGELLESLELPLTEVYALLAKG 158 (182)
T ss_dssp CCBCS--C--TTTB-CCEEEEEEECSCEECSCCCCCTTCCEEEEEEEHHHHHHHHHTT
T ss_pred EEEeC--C--CCcc-ccEEEEEEEeccccCCCCCCCCCceEEEEEEEHHHHHHHHHcC
Confidence 54311 1 1112 34667777753 23445677899999999999999999875
No 35
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.77 E-value=2.7e-18 Score=133.85 Aligned_cols=125 Identities=11% Similarity=0.117 Sum_probs=93.2
Q ss_pred CceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCee
Q 029829 5 VPNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 84 (187)
Q Consensus 5 ~h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~ 84 (187)
.|+++++++++.+|+|||+||... .++|.|.+| ||++++||+ +.+||+||+.||||+.+... .
T Consensus 23 ~~~~~~~~vi~~~~~vLL~~r~~~--~~~g~W~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~-----~ 85 (176)
T 3q93_A 23 ASRLYTLVLVLQPQRVLLGMKKRG--FGAGRWNGF-GGKVQEGET---------IEDGARRELQEESGLTVDAL-----H 85 (176)
T ss_dssp CEEEEEEEEEECSSEEEEEEECSS--TTTTSEECE-EEECCTTSC---------HHHHHHHHHHHHHSCEESCC-----E
T ss_pred CCcEEEEEEEEeCCEEEEEEEcCC--CCCCeEECc-eecCCCCCC---------HHHHHHHHHHHHHCCcceee-----E
Confidence 367777888888899999998643 479999997 799999999 89999999999999998743 5
Q ss_pred eeeEEEEEccCCCCcceeEEEEEEEEec-CCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHHH
Q 029829 85 PLGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL 162 (187)
Q Consensus 85 ~~~~~~y~~~~~~~~~e~e~~~vf~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~l 162 (187)
+++.+.+..+... .+...++|.+.. +.. +...|..+++|++++++.++ .+.|..+.++..++
T Consensus 86 ~l~~~~~~~~~~~---~~~~~~~f~~~~~~~~--~~~~e~~~~~W~~~~el~~~-----------~~~~~~~~~l~~~~ 148 (176)
T 3q93_A 86 KVGQIVFEFVGEP---ELMDVHVFCTDSIQGT--PVESDEMRPCWFQLDQIPFK-----------DMWPDDSYWFPLLL 148 (176)
T ss_dssp EEEEEEEEETTCS---CEEEEEEEEESCEESC--CCCCSSEEEEEEETTCCCGG-----------GBCTTHHHHHHHHH
T ss_pred EEEEEEEEcCCCC---cEEEEEEEEEECCCCC--cCCCcceeeEEeeHHHcccc-----------ccCcchHHHHHHHH
Confidence 6777766654322 134557777753 233 33457788899999998753 56676777777664
No 36
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.77 E-value=2.4e-19 Score=144.93 Aligned_cols=137 Identities=9% Similarity=0.145 Sum_probs=86.6
Q ss_pred CCCCceEEEEEEEeCCCeEEEEEecCCCC--CCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCC
Q 029829 2 HKCVPNIFSILGFVSYSVMSGQQRSGTKV--TFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVP 79 (187)
Q Consensus 2 ~g~~h~av~v~i~~~~g~vLL~rRs~~k~--~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~ 79 (187)
++.+|..+..+|+..+|++|++||+..+. .++|.|++.+|||+++||+. ++.+.+++||+||++|||||.+..
T Consensus 63 d~~~~q~i~~~II~~~grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~---~p~EtleeAa~REl~EEtGl~v~~-- 137 (211)
T 3e57_A 63 DETTKQVIPYVVIMDGDRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGA---TPREAFLKGLEREVNEEVDVSLRE-- 137 (211)
T ss_dssp CTTEEEEEEEEEEEETTEEEEEEC------------CBSSEECCCBGGGCS---SHHHHHHHHHHHHHHHHEEEEEEE--
T ss_pred CCcccceEEEEEEEECCEEEEEEECCCCCcccccCCcccccceEEeCCCCC---CchhhHHHHHHHHHHHHhCCeeec--
Confidence 34566666666666689999999986542 47899999669999999971 111236999999999999997754
Q ss_pred CCCeeeeeEEEEEccCCCCcceeEEEEEEEEecCCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHH
Q 029829 80 VDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVD 159 (187)
Q Consensus 80 ~~~l~~~~~~~y~~~~~~~~~e~e~~~vf~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~ 159 (187)
+.++|.+.+.... .+...+.++|.+... ...++..|+.+++|++++++.++.. .+-+|.+.+++
T Consensus 138 ---~~~ig~~~~~~~~---~~~~~l~~~f~~~~~-~g~~~~~E~~~~~W~~~~eL~~~~~---------~le~wS~lvl~ 201 (211)
T 3e57_A 138 ---LEFLGLINSSTTE---VSRVHLGALFLGRGK-FFSVKEKDLFEWELIKLEELEKFSG---------VMEGWSKISAA 201 (211)
T ss_dssp ---EEEEEEEECCSSH---HHHTEEEEEEEEEEE-EEEESCTTTCEEEEEEHHHHHHHGG---------GCCHHHHHHHH
T ss_pred ---cEEEEEEeccCCC---CCeEEEEEEEEEEeC-CceeCCCCeEEEEEEEHHHHHHhHh---------hccchhHHHHH
Confidence 3557665442211 111224456666542 2344567889999999999998744 35566666554
No 37
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.76 E-value=1.3e-18 Score=136.59 Aligned_cols=137 Identities=15% Similarity=0.075 Sum_probs=93.6
Q ss_pred CCceEEEEEEEe---C----CCeEEEEEecC-----CCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHh
Q 029829 4 CVPNIFSILGFV---S----YSVMSGQQRSG-----TKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDEL 71 (187)
Q Consensus 4 ~~h~av~v~i~~---~----~g~vLL~rRs~-----~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~ 71 (187)
..|.+|.++|+. . +++|||+||+. .+..++|.|.+| ||++++||+ +.+||+||++|||
T Consensus 25 p~~~~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lP-GG~ve~gEs---------~~~aa~REl~EEt 94 (187)
T 3i9x_A 25 PDGYTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVP-GGFVDENES---------AEQAAERELEEET 94 (187)
T ss_dssp CSEEEEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEECS-EEECCTTSC---------HHHHHHHHHHHHH
T ss_pred cccceEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEECC-ceeCCCCCC---------HHHHHHHHHHHHH
Confidence 345677777755 2 36899999975 344689999998 799999999 8999999999999
Q ss_pred CCCccCCCCCCeeeeeEEEEEccCCCCcceeEEEEEEEEecC---CcCCCCccccceEEEecHHHHHHHHHhccCCCCCc
Q 029829 72 GICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRD---VSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGL 148 (187)
Q Consensus 72 Gl~~~~~~~~~l~~~~~~~y~~~~~~~~~e~e~~~vf~~~~~---~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~ 148 (187)
||.+... ..++. |..+...... +.+..+|++... .....+.+|+.+++|++++++..+
T Consensus 95 Gl~~~~~-----~~l~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~----------- 155 (187)
T 3i9x_A 95 SLTDIPL-----IPFGV--FDKPGRDPRG-WIISRAFYAIVPPEALEKRAAGDDAAEIGLFPMTEALEL----------- 155 (187)
T ss_dssp CCCSCCC-----EEEEE--ECCTTSSTTS-SEEEEEEEEECCHHHHHHHHHSTTTTTEEEEEHHHHTTS-----------
T ss_pred CCCCcce-----EEEEE--EcCCccCCCC-CEEEEEEEEEEcCcccCCcCCCCceeEEEEEeHHHcccC-----------
Confidence 9987643 44655 3332211111 233344444332 111234579999999999998842
Q ss_pred ccChhHHHHHHHHHHHHHhHh
Q 029829 149 KLSPWFRLVVDNFLFKWWDHL 169 (187)
Q Consensus 149 ~~~p~~~~~~~~~l~~~~~~~ 169 (187)
.+.|..+.++..++......+
T Consensus 156 ~l~~~~~~il~~a~~~l~~~~ 176 (187)
T 3i9x_A 156 PLAFDHLDMLKKAFSAITEEF 176 (187)
T ss_dssp CBSTTHHHHHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHHhhh
Confidence 577778888888766554443
No 38
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.76 E-value=3.6e-18 Score=129.18 Aligned_cols=124 Identities=11% Similarity=0.066 Sum_probs=85.8
Q ss_pred CCceEEEEEEEeCCCe----EEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCC
Q 029829 4 CVPNIFSILGFVSYSV----MSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVP 79 (187)
Q Consensus 4 ~~h~av~v~i~~~~g~----vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~ 79 (187)
..|.++++++++ +|+ +|+++|+... |+| |.+| ||++++||+ +.+||+||+.||||+.+...
T Consensus 6 ~~~~~~~~ii~~-~~~~~~~vLl~~r~~~~--~~g-w~lP-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~~- 70 (155)
T 2b06_A 6 LTILTNICLIED-LETQRVVMQYRAPENNR--WSG-YAFP-GGHVENDEA---------FAESVIREIYEETGLTIQNP- 70 (155)
T ss_dssp CEEEEEEEEEEE-TTTTEEEEEEEC-------CCE-EECC-CCBCCTTSC---------HHHHHHHHHHHHHSEEEESC-
T ss_pred CcEEEEEEEEEE-CCCCeEEEEEEECCCCC--CCC-Eecc-ceecCCCCC---------HHHHHHHHHHHHhCccccCC-
Confidence 356778888877 455 9999998764 788 9986 799999999 89999999999999998753
Q ss_pred CCCeeeeeEEEEEccCCCCcceeEEEEEEEEecCCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHH
Q 029829 80 VDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVD 159 (187)
Q Consensus 80 ~~~l~~~~~~~y~~~~~~~~~e~e~~~vf~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~ 159 (187)
..++.+.+..+. . .+...++|.+..... .++..|+.+++|++++++.++ .+.+..+.+++
T Consensus 71 ----~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~-----------~~~~~~~~~l~ 130 (155)
T 2b06_A 71 ----QLVGIKNWPLDT--G--GRYIVICYKATEFSG-TLQSSEEGEVSWVQKDQIPNL-----------NLAYDMLPLME 130 (155)
T ss_dssp ----EEEEEEEEECTT--S--CEEEEEEEEECEEEE-CCCCBTTBEEEEEEGGGGGGS-----------CBCTTHHHHHH
T ss_pred ----cEEEEEeeccCC--C--ceEEEEEEEEEecCC-CCCCCcceeeEEeeHHHhhhC-----------CCChhHHHHHH
Confidence 345655444321 1 134556676653211 234478999999999998863 45677777777
Q ss_pred HHH
Q 029829 160 NFL 162 (187)
Q Consensus 160 ~~l 162 (187)
.++
T Consensus 131 ~~~ 133 (155)
T 2b06_A 131 MME 133 (155)
T ss_dssp HHH
T ss_pred HHh
Confidence 664
No 39
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.76 E-value=3.8e-19 Score=134.90 Aligned_cols=110 Identities=15% Similarity=0.074 Sum_probs=81.5
Q ss_pred CCceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCe
Q 029829 4 CVPNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEF 83 (187)
Q Consensus 4 ~~h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l 83 (187)
..++++++++++.+|+|||+||+.. .++|.|++| ||++++||+ +.+||+||+.||||+.+...
T Consensus 18 ~~~~~v~~~i~~~~~~vLl~~r~~~--~~~~~w~~P-gG~ve~gE~---------~~~aa~REl~EEtGl~~~~~----- 80 (156)
T 3gg6_A 18 NVCYVVLAVFLSEQDEVLLIQEAKR--ECRGSWYLP-AGRMEPGET---------IVEALQREVKEEAGLHCEPE----- 80 (156)
T ss_dssp TCEEEEEEECBCTTSEEEEEECCCT--TSTTCEECS-EEECCTTCC---------HHHHHHHHHHHHHCEEEEEE-----
T ss_pred ceEEEEEEEEEeCCCEEEEEEecCC--CCCCEEECC-eeeccCCCC---------HHHHHHHHHHHhhCceeEee-----
Confidence 3456788888999999999999853 379999997 799999999 89999999999999988743
Q ss_pred eeeeEEEEEccCCCCcceeEEEEEEEEec-CCcC---CCCccccceEEEecHHHHHHHH
Q 029829 84 TPLGRILYKAPSDGKWGEHELDYLLFIVR-DVSV---NPNPDEVAEYKYVNREQLKELL 138 (187)
Q Consensus 84 ~~~~~~~y~~~~~~~~~e~e~~~vf~~~~-~~~~---~~~~~Ev~~~~Wv~~~el~~~l 138 (187)
..++.+ ... . +.+.++|.+.. +..+ ..+++|+.+++|++++++.+++
T Consensus 81 ~~~~~~--~~~--~----~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 131 (156)
T 3gg6_A 81 TLLSVE--ERG--P----SWVRFVFLARPTGGILKTSKEADAESLQAAWYPRTSLPTPL 131 (156)
T ss_dssp EEEEEE--ESS--T----TEEEEEEEEEEEEECCCCGGGCSSSCSEEEEEETTSCCSSB
T ss_pred eEEEEE--cCC--C----CEEEEEEEEEeeCCeeccCCCCCcceeeeEEEcHHHCcccc
Confidence 335442 211 1 22445666653 2222 2345799999999999987643
No 40
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.75 E-value=3.1e-18 Score=131.80 Aligned_cols=123 Identities=11% Similarity=0.053 Sum_probs=82.8
Q ss_pred CCCceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCC
Q 029829 3 KCVPNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDE 82 (187)
Q Consensus 3 g~~h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~ 82 (187)
...+.+|++++++ +|+|||+||... +|.|++| ||++++||+ +.+||+||++||||+.+...
T Consensus 20 ~~~~~~v~~ii~~-~~~vLL~~r~~~----~~~w~~P-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~---- 80 (171)
T 3id9_A 20 NIMQVRVTGILIE-DEKVLLVKQKVA----NRDWSLP-GGRVENGET---------LEEAMIREMREETGLEVKIK---- 80 (171)
T ss_dssp --CEEEEEEEEEE-TTEEEEEECSST----TCCEECC-EEECCTTCC---------HHHHHHHHHHHHHCCCEEEE----
T ss_pred CceEEEEEEEEEE-CCEEEEEEEECC----CCeEECC-CccCCCCCC---------HHHHHHHHHHHHHCCccccc----
Confidence 4566778888877 589999998753 7999997 799999999 89999999999999998643
Q ss_pred eeeeeEEEEEccCCCCcceeEEEEEEEEec-CCcC-----CCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHH
Q 029829 83 FTPLGRILYKAPSDGKWGEHELDYLLFIVR-DVSV-----NPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRL 156 (187)
Q Consensus 83 l~~~~~~~y~~~~~~~~~e~e~~~vf~~~~-~~~~-----~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~ 156 (187)
..++.+.+ +... . ....++|.+.. ...+ .++.+|+.+++|++++++.++ .+.|..+.
T Consensus 81 -~~~~~~~~--~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~-----------~~~~~~~~ 143 (171)
T 3id9_A 81 -KLLYVCDK--PDAS--P-SLLHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSYY-----------GFSETFIN 143 (171)
T ss_dssp -EEEEEEEE--TTSS--S-CEEEEEEEEEEC-------------CCCCCEEEEETGGGGGG-----------TCCTTCSH
T ss_pred -eEEEEEcc--cCCC--C-cEEEEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhhC-----------CCCHHHHH
Confidence 33444333 2211 1 22334444443 2222 236689999999999999864 46666666
Q ss_pred HHHHH
Q 029829 157 VVDNF 161 (187)
Q Consensus 157 ~~~~~ 161 (187)
++.++
T Consensus 144 ~l~~~ 148 (171)
T 3id9_A 144 LISGG 148 (171)
T ss_dssp HHHHG
T ss_pred HHHHh
Confidence 66655
No 41
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.75 E-value=1.7e-17 Score=124.18 Aligned_cols=110 Identities=13% Similarity=0.144 Sum_probs=77.1
Q ss_pred ceEEEEEEEeCC-CeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCee
Q 029829 6 PNIFSILGFVSY-SVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 84 (187)
Q Consensus 6 h~av~v~i~~~~-g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~ 84 (187)
.++++++|++.+ |+|||+||+. +|.|++| ||++++||+ +.+||+||+.||||+.+....
T Consensus 4 i~~~~~~i~~~~~~~vLl~~r~~-----~g~w~~P-gG~ve~gEs---------~~~aa~RE~~EEtGl~~~~~~----- 63 (146)
T 2jvb_A 4 IPVRGAAIFNENLSKILLVQGTE-----SDSWSFP-RGKISKDEN---------DIDCCIREVKEEIGFDLTDYI----- 63 (146)
T ss_dssp SCCEEEEEBCTTSSEEEEECCSS-----SSCCBCC-EECCCSSSC---------HHHHHHHHHHHHTSCCCSSSS-----
T ss_pred eEEEEEEEEeCCCCEEEEEEEcC-----CCcEECC-cccCCCCCC---------HHHHHHHHHHHHHCCCchHhc-----
Confidence 356788888876 8999998763 5899997 799999999 899999999999999887531
Q ss_pred eeeEEEEEccCCCCcceeEEEEEEEEec---CCcCCC-CccccceEEEecHHHHHHHHHhc
Q 029829 85 PLGRILYKAPSDGKWGEHELDYLLFIVR---DVSVNP-NPDEVAEYKYVNREQLKELLRKA 141 (187)
Q Consensus 85 ~~~~~~y~~~~~~~~~e~e~~~vf~~~~---~~~~~~-~~~Ev~~~~Wv~~~el~~~l~~~ 141 (187)
.++.+.... .. . ...++|++.. .....+ +.+|+.+++|++++++.+++...
T Consensus 64 ~~~~~~~~~-~~---~--~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 118 (146)
T 2jvb_A 64 DDNQFIERN-IQ---G--KNYKIFLISGVSEVFNFKPQVRNEIDKIEWFDFKKISKTMYKS 118 (146)
T ss_dssp CSSCEEEEE-ET---T--EEEEEEEECCCCSSSCCCCCCSSSCCCEEEEEHHHHHTGGGCS
T ss_pred ccccccccc-cC---C--ceEEEEEEEeccccccCCcCCcchhheeEEeEHHHHHhhhccc
Confidence 122222211 11 1 1234444432 122233 36899999999999999977654
No 42
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.75 E-value=2.3e-18 Score=135.55 Aligned_cols=111 Identities=15% Similarity=-0.062 Sum_probs=78.0
Q ss_pred EEEEEEEeCCC--eEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCeee
Q 029829 8 IFSILGFVSYS--VMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 85 (187)
Q Consensus 8 av~v~i~~~~g--~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~ 85 (187)
++.+++++.+| +|||+||+..+..++|.|++| ||++++||+ +.+||+||+.||||+.+... .+
T Consensus 36 ~~~~v~i~~~~~~~vLL~~r~~~~~~~~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~-----~~ 100 (194)
T 1nqz_A 36 AAVLVALTREADPRVLLTVRSSELPTHKGQIAFP-GGSLDAGET---------PTQAALREAQEEVALDPAAV-----TL 100 (194)
T ss_dssp EEEEEEEESSSSCBBCEEEEC------CCCEECS-EEECCTTCC---------HHHHHHHHHHHHHCCCGGGC-----EE
T ss_pred EEEEEEEecCCCeEEEEEEecCCCCCCCCeEECC-cccCCCCCC---------HHHHHHHHHHHHHCCCccce-----EE
Confidence 44444457778 999999987766789999997 799999998 89999999999999988753 44
Q ss_pred eeEEEEEccCCCCcceeEEEEEEEEecC--Cc-CCCCccccceEEEecHHHH-HHHH
Q 029829 86 LGRILYKAPSDGKWGEHELDYLLFIVRD--VS-VNPNPDEVAEYKYVNREQL-KELL 138 (187)
Q Consensus 86 ~~~~~y~~~~~~~~~e~e~~~vf~~~~~--~~-~~~~~~Ev~~~~Wv~~~el-~~~l 138 (187)
++.+.+..... +...++|++... .. ..++++|+.+++|++++++ .+..
T Consensus 101 l~~~~~~~~~~-----~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 152 (194)
T 1nqz_A 101 LGELDDVFTPV-----GFHVTPVLGRIAPEALDTLRVTPEVAQIITPTLAELRAVPL 152 (194)
T ss_dssp EEECCCEEETT-----TEEEEEEEEEECGGGGGGCCCCTTEEEEECCBHHHHHHSCC
T ss_pred EEEccCccCCC-----CeEEEEEEEEecCCccccCCCccceeEEEEEEHHHhccCCC
Confidence 65543332211 234566666543 33 4567789999999999999 6543
No 43
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.75 E-value=2e-17 Score=127.59 Aligned_cols=115 Identities=17% Similarity=0.131 Sum_probs=82.6
Q ss_pred CCCceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCC
Q 029829 3 KCVPNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDE 82 (187)
Q Consensus 3 g~~h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~ 82 (187)
..+|.+|++++++.+|+|||++|+. +|.|++| ||++++||+ +.+||+||+.||||+.+...
T Consensus 5 ~~~~~~v~~~i~~~~~~vLl~~r~~-----~~~w~~p-~G~~e~gE~---------~~~aa~RE~~EE~G~~~~~~---- 65 (164)
T 2kdv_A 5 DGYRPNVGIVICNRQGQVMWARRFG-----QHSWQFP-QGGINPGES---------AEQAMYRELFEEVGLSRKDV---- 65 (164)
T ss_dssp SSEEEEEEEEEECTTSEEEEEEETT-----CCCEECC-EEECCTTCC---------HHHHHHHHHHHHHCCCGGGE----
T ss_pred CCCCcEEEEEEEccCCEEEEEEEcC-----CCeEECC-eeecCCCCC---------HHHHHHHHHHHHHCCCccce----
Confidence 3578899999999999999999874 6899997 699999999 89999999999999998743
Q ss_pred eeeeeEE----EEEccCCC------CcceeEEEEEEEEecC---CcCCCC---ccccceEEEecHHHHHHH
Q 029829 83 FTPLGRI----LYKAPSDG------KWGEHELDYLLFIVRD---VSVNPN---PDEVAEYKYVNREQLKEL 137 (187)
Q Consensus 83 l~~~~~~----~y~~~~~~------~~~e~e~~~vf~~~~~---~~~~~~---~~Ev~~~~Wv~~~el~~~ 137 (187)
.+++.+ .|..+... ........++|++... ..+.++ .+|+.+++|++++++.+.
T Consensus 66 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~E~~~~~W~~~~e~~~~ 135 (164)
T 2kdv_A 66 -RILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQ 135 (164)
T ss_dssp -EEEEECSSCEEEECCTTTCCTTSSSCCCEEEEEEEEEEESSCGGGCCSCSSSSCSEEEEEEEETTTGGGG
T ss_pred -EEEEEecceeEEecCcceeeeccCcccccceeEEEEEEecCCccccccCCCCCchhceEEEecHHHhhhh
Confidence 345443 34443211 0111234456666532 233443 359999999999987643
No 44
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.75 E-value=4.3e-19 Score=129.69 Aligned_cols=118 Identities=14% Similarity=0.133 Sum_probs=83.4
Q ss_pred EEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCeeeeeEEE
Q 029829 11 ILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRIL 90 (187)
Q Consensus 11 v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~~~~~~ 90 (187)
+++++.+|++||+||+..+ .++|.|++| ||++++||+ +.+||.||+.||||+.+.... +++.+.
T Consensus 9 ~ii~~~~~~vLl~~r~~~~-~~~g~w~~P-gG~~e~gE~---------~~~aa~RE~~EE~G~~~~~~~-----~~~~~~ 72 (129)
T 1mut_A 9 GIIRNENNEIFITRRAADA-HMANKLEFP-GGKIEMGET---------PEQAVVRELQEEVGITPQHFS-----LFEKLE 72 (129)
T ss_dssp EECEETTTEEEEEECSSCC-SSSCCEECC-CCCSSSCSS---------TTHHHHHHHHTTTCCSSCEEC-----CCCCCB
T ss_pred EEEEecCCEEEEEEeCCCC-CCCCeEECC-ccCcCCCCC---------HHHHHHHHHHHHhCCccccce-----EEEEEE
Confidence 3456778999999998765 689999997 799999999 799999999999999986533 244332
Q ss_pred EEccCCCCcceeEEEEEEEEecCCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHH
Q 029829 91 YKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNF 161 (187)
Q Consensus 91 y~~~~~~~~~e~e~~~vf~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~ 161 (187)
+..+ .. +...++|.+..... .++.+|+.+++|++++++.++ .+.|..+.+++.+
T Consensus 73 ~~~~--~~---~~~~~~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~-----------~~~~~~~~~l~~l 126 (129)
T 1mut_A 73 YEFP--DR---HITLWFWLVERWEG-EPWGKEGQPGEWMSLVGLNAD-----------DFPPANEPVIAKL 126 (129)
T ss_dssp CCCS--SC---EEECCCEEEEECSS-CCCCCSSCCCEEEESSSCCTT-----------TSCTTCHHHHHHH
T ss_pred EecC--Cc---eEEEEEEEEEccCC-ccCCcccceeEEeCHHHcccc-----------cCCchhHHHHHHH
Confidence 2221 11 22345666654221 234578999999999998753 4666667666654
No 45
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.75 E-value=2.3e-17 Score=130.81 Aligned_cols=127 Identities=15% Similarity=0.157 Sum_probs=82.3
Q ss_pred eEEEEEEEeC-CCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCeee
Q 029829 7 NIFSILGFVS-YSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 85 (187)
Q Consensus 7 ~av~v~i~~~-~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~ 85 (187)
.+|.+++++. +++|||+||.. .++|.|++| ||++++||+ +.+||+||+.||||+.+.... .
T Consensus 27 v~v~~~v~~~~~~~vLL~~r~~---~~~g~w~lP-GG~ve~gEs---------~~~aA~REl~EEtGl~~~~~~-----l 88 (199)
T 3h95_A 27 VGVAGAVFDESTRKILVVQDRN---KLKNMWKFP-GGLSEPEED---------IGDTAVREVFEETGIKSEFRS-----V 88 (199)
T ss_dssp CEEEEEEEETTTTEEEEEEESS---SSTTSBBCC-EEECCTTCC---------HHHHHHHHHHHHHCCCEEEEE-----E
T ss_pred ceEEEEEEeCCCCEEEEEEEcC---CCCCCEECC-ccccCCCCC---------HHHHHHHHHHHHhCCccccce-----E
Confidence 4677777775 47999999864 368999998 799999999 899999999999999986432 2
Q ss_pred eeEEEEEccCCCCcceeEEEEEEEEec-CCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHHH
Q 029829 86 LGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL 162 (187)
Q Consensus 86 ~~~~~y~~~~~~~~~e~e~~~vf~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~l 162 (187)
++. .......+......+.+++.+.. +..+.++++|+.+++|++++++.++. ...|..+.++..++
T Consensus 89 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~----------~~~~~~~~~~~~~~ 155 (199)
T 3h95_A 89 LSI-RQQHTNPGAFGKSDMYIICRLKPYSFTINFCQEECLRCEWMDLNDLAKTE----------NTTPITSRVARLLL 155 (199)
T ss_dssp EEE-EECC---------CEEEEEEEEESCCCCCCCTTTEEEEEEEEHHHHHHCS----------SBCHHHHHHHHHHH
T ss_pred EEE-EeeecCCCCceeEEEEEEEEEcCCCcccCCCccceeeeEEEeHHHHhhhh----------hcChHHHHHHHHHH
Confidence 331 11111111111011222222222 34556778999999999999999763 33454555555443
No 46
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.74 E-value=1.3e-17 Score=124.07 Aligned_cols=124 Identities=15% Similarity=0.093 Sum_probs=85.8
Q ss_pred ceEEEEEEEe--CCCe--EEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCC
Q 029829 6 PNIFSILGFV--SYSV--MSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVD 81 (187)
Q Consensus 6 h~av~v~i~~--~~g~--vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~ 81 (187)
+.++++++++ .+|+ +||+||+.. |+.|++| ||++++||+ +.+||+||+.||||+.+...
T Consensus 9 ~~~v~~vi~~~~~~~~~~vLl~~r~~~----~~~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~~--- 71 (139)
T 2yyh_A 9 LLATDVIIRLWDGENFKGIVLIERKYP----PVGLALP-GGFVEVGER---------VEEAAAREMREETGLEVRLH--- 71 (139)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEECSS----SCSEECC-EEECCTTCC---------HHHHHHHHHHHHHCCCCEEE---
T ss_pred eEEEEEEEEEEcCCCcEEEEEEEecCC----CCcEECc-cccCCCCCC---------HHHHHHHHHHHHHCCCcccc---
Confidence 4577777776 6788 999999753 4569997 799999999 89999999999999988643
Q ss_pred CeeeeeEEEEEccCCCCcceeEEEEEEEEecCCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHH
Q 029829 82 EFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNF 161 (187)
Q Consensus 82 ~l~~~~~~~y~~~~~~~~~e~e~~~vf~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~ 161 (187)
.+++. |..+..+.. .+...++|.+.....+. +.+|+.+++|++++++.. ..+.+..+.++..+
T Consensus 72 --~~~~~--~~~~~~~~~-~~~~~~~f~~~~~~~~~-~~~e~~~~~W~~~~el~~-----------~~l~~~~~~~l~~~ 134 (139)
T 2yyh_A 72 --KLMGV--YSDPERDPR-AHVVSVVWIGDAQGEPK-AGSDAKKVKVYRLEEIPL-----------DKLVFDHKKIILDF 134 (139)
T ss_dssp --EEEEE--ECCTTSCTT-SCEEEEEEEEEEESCCC-CCTTEEEEEEECTTSCCG-----------GGBCTTHHHHHHHH
T ss_pred --eEEEE--ECCCCcCCC-ceEEEEEEEEecCCccC-CCCCcceEEEEEHHHCCH-----------hhcCCCHHHHHHHH
Confidence 33443 333222111 14566777776544343 457999999999999872 02344456667766
Q ss_pred HH
Q 029829 162 LF 163 (187)
Q Consensus 162 l~ 163 (187)
+.
T Consensus 135 l~ 136 (139)
T 2yyh_A 135 LK 136 (139)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 47
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.73 E-value=3.5e-18 Score=130.12 Aligned_cols=126 Identities=13% Similarity=0.087 Sum_probs=85.0
Q ss_pred eEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCC-eee
Q 029829 7 NIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDE-FTP 85 (187)
Q Consensus 7 ~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~-l~~ 85 (187)
.+++++|++ +|+|||+||+. +|.|++| ||++++||+ +.+||+||+.||||+.+....... +..
T Consensus 2 ~~~~~vi~~-~~~vLL~~r~~-----~g~W~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~~~~~~~~~ 65 (156)
T 1k2e_A 2 IVTSGVLVE-NGKVLLVKHKR-----LGVYIYP-GGHVEHNET---------PIEAVKREFEEETGIVVEPIGFTYGIID 65 (156)
T ss_dssp EEEEEECEE-TTEEEEEECTT-----TCSEECS-EEECCTTCC---------HHHHHHHHHHHHHSEEEEECCCCCCCBS
T ss_pred eEEEEEEEE-CCEEEEEEEcC-----CCcEECC-eeecCCCCC---------HHHHHHHHHHHHHCCcceeccceeeecc
Confidence 467778888 88999999863 6899997 799999999 899999999999999987543210 000
Q ss_pred ----------eeEEEEEccCCCCcceeEEEEEEEEecCCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHH
Q 029829 86 ----------LGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFR 155 (187)
Q Consensus 86 ----------~~~~~y~~~~~~~~~e~e~~~vf~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~ 155 (187)
.....+. ...+. ....+..+|.+.. ..+|+.+++|++++++.+ ..+.|..+
T Consensus 66 ~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~f~~~~------~~~e~~~~~W~~~~el~~-----------~~~~~~~~ 126 (156)
T 1k2e_A 66 ENAVERPMPLVILEEVV-KYPEE-THIHFDLIYLVKR------VGGDLKNGEWIDVREIDR-----------IETFPNVR 126 (156)
T ss_dssp SSEEECCCCSEEEEEEE-ECSSC-EEEEEEEEEEEEE------EEECCCSCEEEEGGGGGG-----------SCBSTTHH
T ss_pred cccccccccceeeeeee-cCCCC-ceEEEEEEEEEEe------cCCcEeeeEEeCHHHHhc-----------CCCChHHH
Confidence 0000011 11111 1122444555542 235789999999999874 25778888
Q ss_pred HHHHHHHHHHHh
Q 029829 156 LVVDNFLFKWWD 167 (187)
Q Consensus 156 ~~~~~~l~~~~~ 167 (187)
.+++.++.....
T Consensus 127 ~~l~~~~~~l~~ 138 (156)
T 1k2e_A 127 KVVSLALSTLYR 138 (156)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 888888665443
No 48
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.73 E-value=2.8e-18 Score=129.77 Aligned_cols=110 Identities=11% Similarity=0.062 Sum_probs=78.7
Q ss_pred CCceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCe
Q 029829 4 CVPNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEF 83 (187)
Q Consensus 4 ~~h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l 83 (187)
.+|.+++++|++ +|+|||+|| +|.|.+| ||++++||+ +.+||+||+.||||+.+...
T Consensus 17 ~~~~~~~~ii~~-~~~vLl~~r-------~~~w~lP-gG~ve~gE~---------~~~aa~REl~EEtGl~~~~~----- 73 (154)
T 2pqv_A 17 VFGVRATALIVQ-NHKLLVTKD-------KGKYYTI-GGAIQVNES---------TEDAVVREVKEELGVKAQAG----- 73 (154)
T ss_dssp EEEEEEEECCEE-TTEEEEEEE-------TTEEECE-EEECBTTCC---------HHHHHHHHHHHHHCCCEEEE-----
T ss_pred eEeEEEEEEEEE-CCEEEEEec-------CCeEECc-ccCcCCCCC---------HHHHHHHHHHHHhCCeeeec-----
Confidence 456677888876 689999998 6899986 799999999 89999999999999998743
Q ss_pred eeeeEEEEEccCCCCcceeEEEEEEEEecC-CcCC--CCccccceEEEecHHHHHHH
Q 029829 84 TPLGRILYKAPSDGKWGEHELDYLLFIVRD-VSVN--PNPDEVAEYKYVNREQLKEL 137 (187)
Q Consensus 84 ~~~~~~~y~~~~~~~~~e~e~~~vf~~~~~-~~~~--~~~~Ev~~~~Wv~~~el~~~ 137 (187)
.+++.+.+..+.. +...+.+.++|.+... .... ..++|+.+++|++++++.++
T Consensus 74 ~~~~~~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~ 129 (154)
T 2pqv_A 74 QLAFVVENRFEVD-GVSYHNIEFHYLVDLLEDAPLTMQEDEKRQPCEWIDLDKLQNI 129 (154)
T ss_dssp EEEEEEEEEEEET-TEEEEEEEEEEEEEESSCCCSEEEETTEEEEEEEEEGGGGGGS
T ss_pred eEEEEEeeeecCC-CCcceEEEEEEEEEecCCCCcccCCCCceeeEEEeEHHHHhhc
Confidence 3344444333322 2222445567777643 2221 23567999999999999864
No 49
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.73 E-value=1.9e-17 Score=130.57 Aligned_cols=124 Identities=11% Similarity=0.107 Sum_probs=87.6
Q ss_pred ceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCeee
Q 029829 6 PNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 85 (187)
Q Consensus 6 h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~ 85 (187)
.+++.+++++ +|+|||+||. .+|.|.+| ||++++||+ +.+||+||+.||||+.+... .+
T Consensus 4 ~~v~~~vi~~-~~~vLL~~r~-----~~g~W~lP-GG~ve~gEs---------~~~aa~REl~EEtGl~~~~~-----~~ 62 (188)
T 3fk9_A 4 QRVTNCIVVD-HDQVLLLQKP-----RRGWWVAP-GGKMEAGES---------ILETVKREYWEETGITVKNP-----EL 62 (188)
T ss_dssp CEEEEEEEEE-TTEEEEEECT-----TTCCEECC-EEECCTTCC---------HHHHHHHHHHHHHSCEESSC-----EE
T ss_pred eEEEEEEEEE-CCEEEEEEeC-----CCCeEECC-eecccCCCC---------HHHHHHHHHHHHHCCCCCCc-----eE
Confidence 4566777766 6899999984 37999998 799999999 89999999999999998753 34
Q ss_pred eeEEEEEccCCCCcceeEEEEEEEEec-CCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHHH
Q 029829 86 LGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL 162 (187)
Q Consensus 86 ~~~~~y~~~~~~~~~e~e~~~vf~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~l 162 (187)
++.+.+..........+...++|.+.. ...+.++ .|..+++|++++++.++ .+.|..+.++..++
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~f~a~~~~~~~~~~-~e~~~~~W~~~~el~~~-----------~l~~~~~~~l~~~l 128 (188)
T 3fk9_A 63 KGIFSMVIFDEGKIVSEWMLFTFKATEHEGEMLKQ-SPEGKLEWKKKDEVLEL-----------PMAAGDKWIFKHVL 128 (188)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEESCEESCCCSE-ETTEEEEEEEGGGGGGS-----------CCCHHHHHHHHHHT
T ss_pred EEEEEEEecCCCcceEEEEEEEEEEECCCCCCcCC-CCCEeEEEEEHHHhhhC-----------CCCHHHHHHHHHHH
Confidence 566555543322221122557777754 3333333 45579999999998643 56677777777664
No 50
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.72 E-value=1.2e-16 Score=128.07 Aligned_cols=116 Identities=17% Similarity=0.142 Sum_probs=81.9
Q ss_pred ceEEEEEEEe-CCCeEEEEE--ecCCCC--CCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCC
Q 029829 6 PNIFSILGFV-SYSVMSGQQ--RSGTKV--TFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPV 80 (187)
Q Consensus 6 h~av~v~i~~-~~g~vLL~r--Rs~~k~--~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~ 80 (187)
+.+|+|++++ .+|+|||.+ |..... ..++.|++| ||++++||+ +.+||+||+.||||+.+..
T Consensus 57 ~~av~vl~~~~~~~~vLLvrq~R~~~~~~~~~~~~welP-gG~ve~gE~---------~~~aA~REl~EEtGl~~~~--- 123 (209)
T 1g0s_A 57 GHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMV-AGMIEEGES---------VEDVARREAIEEAGLIVKR--- 123 (209)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECGGGGGGSSCSEEEECE-EEECCTTCC---------HHHHHHHHHHHHHCCCCCC---
T ss_pred CCEEEEEEEECCCCEEEEEEeecccCCCCCCCCeEEEeC-cccCCCCcC---------HHHHHHHHHHHHcCcccCc---
Confidence 3589999999 568998854 543221 136889987 799999999 8999999999999998863
Q ss_pred CCeeeeeEEEEEccCCCCcceeEEEEEEEEecCC----c--CCCCccccceEEEecHHHHHHHHHhc
Q 029829 81 DEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDV----S--VNPNPDEVAEYKYVNREQLKELLRKA 141 (187)
Q Consensus 81 ~~l~~~~~~~y~~~~~~~~~e~e~~~vf~~~~~~----~--~~~~~~Ev~~~~Wv~~~el~~~l~~~ 141 (187)
+.+++.+ |..+ +.. .+.+++|++..+. . ...+++|+.++.|++++++.+++..+
T Consensus 124 --~~~l~~~-~~~~---g~~-~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~i~~g 183 (209)
T 1g0s_A 124 --TKPVLSF-LASP---GGT-SERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEEG 183 (209)
T ss_dssp --EEEEEEE-ESCT---TTB-CCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHHHHTT
T ss_pred --EEEeEEE-ecCC---Ccc-CcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHHHHcC
Confidence 4567664 3322 222 3466777776421 1 23567889999999999999999976
No 51
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.72 E-value=5.8e-18 Score=135.19 Aligned_cols=123 Identities=9% Similarity=0.034 Sum_probs=84.5
Q ss_pred ceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCeee
Q 029829 6 PNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 85 (187)
Q Consensus 6 h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~ 85 (187)
+.+|.++|++ +|+|||+||+. +|.|++| ||++++||+ +.+||+||+.||||+.+... ..
T Consensus 68 ~~~v~~vv~~-~~~vLLv~r~~-----~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~v~~~-----~~ 126 (205)
T 3q1p_A 68 KVDIRAVVFQ-NEKLLFVKEKS-----DGKWALP-GGWADVGYT---------PTEVAAKEVFEETGYEVDHF-----KL 126 (205)
T ss_dssp EEEEEEEEEE-TTEEEEEEC--------CCEECS-EEECCTTCC---------HHHHHHHHHHHHHSEEEEEE-----EE
T ss_pred cceEEEEEEE-CCEEEEEEEcC-----CCcEECC-cCccCCCCC---------HHHHHHHHHHHHHCCccccc-----eE
Confidence 3467778887 78999999862 6899997 799999999 89999999999999998743 34
Q ss_pred eeEEEEEccCCCCcceeEEEEEEEEec-CCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHH
Q 029829 86 LGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNF 161 (187)
Q Consensus 86 ~~~~~y~~~~~~~~~e~e~~~vf~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~ 161 (187)
++.+.+..........+.+.++|.+.. +..+.++ +|+.+++|++++++.++ .+.|..+.++..+
T Consensus 127 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~E~~~~~w~~~~el~~l-----------~~~~~~~~~i~~~ 191 (205)
T 3q1p_A 127 LAIFDKEKHQPSPSATHVYKIFIGCEIIGGEKKTS-IETEEVEFFGENELPNL-----------SIARNTEDQIKEM 191 (205)
T ss_dssp EEEEEHHHHSCCCCSSCEEEEEEEEEEEEECCCCC-TTSCCEEEECTTSCCCB-----------CTTTCCHHHHHHH
T ss_pred EEEEeccccCCCCCCceEEEEEEEEEecCCccCCC-CcceEEEEEeHHHhhhc-----------CCCccHHHHHHHH
Confidence 554332221111122244556666654 3445555 89999999999998753 4555556655555
No 52
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.71 E-value=7.7e-17 Score=126.79 Aligned_cols=121 Identities=12% Similarity=0.012 Sum_probs=86.2
Q ss_pred EEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCeeeee
Q 029829 8 IFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLG 87 (187)
Q Consensus 8 av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~~~ 87 (187)
++++++++ +|+|||+||.... .+|.|++| ||++++||+ +.+||+||+.||||+.+... ..++
T Consensus 42 ~v~~ii~~-~~~vLL~~r~~~~--~~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~-----~~~~ 103 (189)
T 3cng_A 42 IVGCIPEW-ENKVLLCKRAIAP--YRGKWTLP-AGFMENNET---------LVQGAARETLEEANARVEIR-----ELYA 103 (189)
T ss_dssp EEEEEEEE-TTEEEEEEESSSS--STTCEECS-EEECCTTCC---------HHHHHHHHHHHHHCCCEEEE-----EEEE
T ss_pred EEEEEEEe-CCEEEEEEccCCC--CCCeEECc-eeeccCCCC---------HHHHHHHHHHHHHCCccccc-----eeEE
Confidence 67777777 7899999998653 48999997 799999999 89999999999999987643 2333
Q ss_pred EEEEEccCCCCcceeEEEEEEEEecC-CcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHHHHH
Q 029829 88 RILYKAPSDGKWGEHELDYLLFIVRD-VSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFK 164 (187)
Q Consensus 88 ~~~y~~~~~~~~~e~e~~~vf~~~~~-~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~l~~ 164 (187)
. |..+.. +...++|.+... ..+. ..+|+.+++|++++++... ....|..+.++..|+..
T Consensus 104 ~--~~~~~~-----~~~~~~f~~~~~~~~~~-~~~E~~~~~W~~~~el~~~----------~l~~~~~~~~l~~~l~~ 163 (189)
T 3cng_A 104 V--YSLPHI-----SQVYMLFRAKLLDLDFF-PGIESLEVRLFGEQEIPWN----------DIAFRVIHDPLKRYMEE 163 (189)
T ss_dssp E--EEEGGG-----TEEEEEEEEEECCSCCC-CCTTEEEEEEECTTTCCGG----------GBSCHHHHHHHHHHHHH
T ss_pred E--EecCCC-----cEEEEEEEEEeCCCccC-CCccceeEEEECHHHcCcc----------cccChHHHHHHHHHHHh
Confidence 3 332221 345677777653 3333 3579999999999998621 13356666777766543
No 53
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.71 E-value=1.3e-17 Score=133.21 Aligned_cols=123 Identities=13% Similarity=0.067 Sum_probs=85.3
Q ss_pred ceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCeee
Q 029829 6 PNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 85 (187)
Q Consensus 6 h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~ 85 (187)
+.+|.++|+++ |+|||+||+ +|.|++| ||++++||+ +.+||+||+.||||+.+... ..
T Consensus 70 ~~~v~~vv~~~-~~vLLvrr~------~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~-----~~ 127 (206)
T 3o8s_A 70 KLDTRAAIFQE-DKILLVQEN------DGLWSLP-GGWCDVDQS---------VKDNVVKEVKEEAGLDVEAQ-----RV 127 (206)
T ss_dssp EEEEEEEEEET-TEEEEEECT------TSCEECS-EEECCTTSC---------HHHHHHHHHHHHHCEEEEEE-----EE
T ss_pred CccEEEEEEEC-CEEEEEEec------CCeEECC-eeccCCCCC---------HHHHHHHHHHHHHCCcceee-----eE
Confidence 35677778774 899999987 6899987 699999999 89999999999999988643 34
Q ss_pred eeEEEEEccCCCCcceeEEEEEEEEec-CCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHHH
Q 029829 86 LGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL 162 (187)
Q Consensus 86 ~~~~~y~~~~~~~~~e~e~~~vf~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~l 162 (187)
++.+.+..........+.+.++|.+.. ...+.++ +|+.+++|++++++.++ .+.|.++.++..++
T Consensus 128 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~E~~~~~w~~~~el~~l-----------~~~~~~~~~l~~~~ 193 (206)
T 3o8s_A 128 VAILDKHKNNPAKSAHRVTKVFILCRLLGGEFQPN-SETVASGFFSLDDLPPL-----------YLGKNTAEQLALCL 193 (206)
T ss_dssp EEEEEHHHHCC-----CEEEEEEEEEEEEECCCCC-SSCSEEEEECTTSCCCB-----------CTTTCCHHHHHHHH
T ss_pred EEEEeccccCCCCCCceEEEEEEEEEecCCeecCC-CCceEEEEEeHHHhhhc-----------cCCCchHHHHHHHH
Confidence 554432211111112233445566654 3444555 89999999999998753 45666677666663
No 54
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.70 E-value=4.1e-17 Score=133.71 Aligned_cols=137 Identities=11% Similarity=0.009 Sum_probs=95.3
Q ss_pred ceEEEEEEE---eCCCeEEEEEecCCCCCCCCceeeccccCCCC--CCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCC
Q 029829 6 PNIFSILGF---VSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLY--RESELIEENALGVRNAAQRKLLDELGICAEDVPV 80 (187)
Q Consensus 6 h~av~v~i~---~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~--gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~ 80 (187)
+.+|.++|+ +.+++|||++|+. ..++|.|.+| ||++++ ||+ +.+||+||+.||||+.+..
T Consensus 22 ~v~v~~vi~~~~~~~~~vLLv~R~~--~~~~g~W~lP-GG~ve~~~gEs---------~~~AA~REl~EEtGl~~~~--- 86 (240)
T 3gz5_A 22 LLTVDAVLFTYHDQQLKVLLVQRSN--HPFLGLWGLP-GGFIDETCDES---------LEQTVLRKLAEKTAVVPPY--- 86 (240)
T ss_dssp EEEEEEEEEEEETTEEEEEEEECCS--SSSTTCEECS-EEECCTTTCSB---------HHHHHHHHHHHHHSSCCSE---
T ss_pred ccEEEEEEEEEeCCCcEEEEEECcC--CCCCCCEECC-ccccCCCCCcC---------HHHHHHHHHHHHHCCCCCc---
Confidence 457777777 3446999999984 3578999997 799999 999 8999999999999998864
Q ss_pred CCeeeeeEEEEEccCCCCcceeEEEEEEEEecC-CcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHH
Q 029829 81 DEFTPLGRILYKAPSDGKWGEHELDYLLFIVRD-VSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVD 159 (187)
Q Consensus 81 ~~l~~~~~~~y~~~~~~~~~e~e~~~vf~~~~~-~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~ 159 (187)
+..++.+.+......+ +.+..+|++... .....+.+|+.+++|++++++.. ..+....+.++.
T Consensus 87 --~~~l~~~~~~~r~~~~---~~~~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el~~-----------~~l~~dh~~il~ 150 (240)
T 3gz5_A 87 --IEQLCTVGNNSRDARG---WSVTVCYTALMSYQACQIQIASVSDVKWWPLADVLQ-----------MPLAFDHLQLIE 150 (240)
T ss_dssp --EEEEEEEEESSSSTTS---CEEEEEEEEECCHHHHHHHHTTCTTEEEEEHHHHTT-----------SCCSTTHHHHHH
T ss_pred --eeeEEEeCCCccCCCc---eEEEEEEEEEecccccCCCCCcccceEEecHHHccc-----------CCcchhHHHHHH
Confidence 3446654443222222 345566666543 22233567999999999999852 245555677777
Q ss_pred HHHHHHHhHhcccc
Q 029829 160 NFLFKWWDHLEKGT 173 (187)
Q Consensus 160 ~~l~~~~~~~~~~~ 173 (187)
..+.....+++-..
T Consensus 151 ~a~~rlr~kl~y~~ 164 (240)
T 3gz5_A 151 QARERLTQKALYSL 164 (240)
T ss_dssp HHHHHHHHHHHHCS
T ss_pred HHHHHHHHhcccCc
Confidence 77766666665544
No 55
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.70 E-value=8.1e-17 Score=124.51 Aligned_cols=113 Identities=11% Similarity=0.010 Sum_probs=78.6
Q ss_pred EEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCeeeee
Q 029829 8 IFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLG 87 (187)
Q Consensus 8 av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~~~ 87 (187)
.+++++++.+|++||.+|+ +|.|++| ||++++||+ +.+||+||+.||||+.+... ..++
T Consensus 17 ~~~~~ii~~~~~vLL~~r~------~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~-----~~l~ 75 (163)
T 3f13_A 17 RRATAIIEMPDGVLVTASR------GGRYNLP-GGKANRGEL---------RSQALIREIREETGLRINSM-----LYLF 75 (163)
T ss_dssp EEEEEECEETTEEEEEECC---------BBCS-EEECCTTCC---------HHHHHHHHHHHHHCCCCCEE-----EEEE
T ss_pred EEEEEEEEeCCEEEEEEEC------CCeEECC-ceeCCCCCC---------HHHHHHHHHHHHHCccccee-----EEEE
Confidence 3344444456889998885 5889987 799999999 89999999999999998643 3454
Q ss_pred EEEEEccCCCCcceeEEEEEEEEecCCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHHHH
Q 029829 88 RILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLF 163 (187)
Q Consensus 88 ~~~y~~~~~~~~~e~e~~~vf~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~l~ 163 (187)
. |..+. ...++|++..++.+.++ +|+.+++|++.+. . +..+.|..+.++..|+.
T Consensus 76 ~--~~~~~-------~~~~~f~~~~~~~~~~~-~E~~~~~W~~~~~-~-----------~~~l~~~~~~il~~~~~ 129 (163)
T 3f13_A 76 D--HITPF-------NAHKVYLCIAQGQPKPQ-NEIERIALVSSPD-T-----------DMDLFVEGRAILRRYAR 129 (163)
T ss_dssp E--EECSS-------EEEEEEEEEC-CCCCCC-TTCCEEEEESSTT-C-----------SSCBCHHHHHHHHHHHH
T ss_pred E--EecCC-------eEEEEEEEEECCcCccC-CCceEEEEECccc-c-----------cCCCCHHHHHHHHHHHH
Confidence 3 33221 35567777666666666 4999999999332 1 24788888888887754
No 56
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.70 E-value=1.3e-16 Score=127.43 Aligned_cols=114 Identities=11% Similarity=0.054 Sum_probs=79.4
Q ss_pred eEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCC-CCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCeee
Q 029829 7 NIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPL-YRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 85 (187)
Q Consensus 7 ~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve-~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~ 85 (187)
.+|++++++.+|++||+||.... .++|.|++| ||+++ +||+ +.+||+||+.||||+.+... .+
T Consensus 44 ~av~v~i~~~~~~vLLvrr~r~~-~~~~~w~lP-gG~ve~~gEs---------~~~aa~REl~EEtGl~~~~~-----~~ 107 (207)
T 1mk1_A 44 GAVAIVAMDDNGNIPMVYQYRHT-YGRRLWELP-AGLLDVAGEP---------PHLTAARELREEVGLQASTW-----QV 107 (207)
T ss_dssp CEEEEEECCTTSEEEEEEEEETT-TTEEEEECC-EEECCSTTCC---------HHHHHHHHHHHHHCEEEEEE-----EE
T ss_pred CEEEEEEEcCCCEEEEEEeecCC-CCCcEEEeC-CccccCCCCC---------HHHHHHHHHHHHHCCccccc-----EE
Confidence 48888899989999998876443 468999997 79999 9999 89999999999999988643 44
Q ss_pred eeEEEEEccCCCCcceeEEEEEEEEec-CCcC---CCCccccceEEEecHHHHHHHHHhc
Q 029829 86 LGRILYKAPSDGKWGEHELDYLLFIVR-DVSV---NPNPDEVAEYKYVNREQLKELLRKA 141 (187)
Q Consensus 86 ~~~~~y~~~~~~~~~e~e~~~vf~~~~-~~~~---~~~~~Ev~~~~Wv~~~el~~~l~~~ 141 (187)
++.+ |..+ +.. .+.+++|++.. .... ..+++|+.++.|++++++.+++..+
T Consensus 108 l~~~-~~~~---~~~-~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~ 162 (207)
T 1mk1_A 108 LVDL-DTAP---GFS-DESVRVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARRVLRG 162 (207)
T ss_dssp EEEE-CSCT---TTB-CCCEEEEEEEEEEECCC----------CEEEEEHHHHHHHHHTT
T ss_pred EEEE-EcCC---Ccc-ccEEEEEEEEccccCCCCCCCCCCceEEEEEEEHHHHHHHHHcC
Confidence 6554 3222 222 23456666653 2111 2557899999999999999999875
No 57
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.70 E-value=1.5e-16 Score=134.80 Aligned_cols=134 Identities=10% Similarity=0.013 Sum_probs=87.0
Q ss_pred CceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCee
Q 029829 5 VPNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 84 (187)
Q Consensus 5 ~h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~ 84 (187)
.+.+|++++++ +|+|||+||+.. ..+|.|++| ||++++||+ +.+||+||+.||||+.+....+.. .
T Consensus 202 ~~~~v~~vi~~-~~~vLL~~r~~~--~~~g~w~lP-gG~ve~gE~---------~~~aa~REl~EEtGl~~~~~~~~~-~ 267 (341)
T 2qjo_A 202 TFITTDAVVVQ-AGHVLMVRRQAK--PGLGLIALP-GGFIKQNET---------LVEGMLRELKEETRLKVPLPVLRG-S 267 (341)
T ss_dssp CEEEEEEEEEE-TTEEEEEECCSS--SSTTCEECS-EEECCTTSC---------HHHHHHHHHHHHHCCSSCHHHHHH-T
T ss_pred CceEEEEEEEe-CCEEEEEEecCC--CCCCeEECC-CCcCCCCCC---------HHHHHHHHHhhhhCCccccccccc-c
Confidence 35677888875 689999999754 358999997 799999999 899999999999999987432100 0
Q ss_pred eeeEEEEEccCCCCcceeEEEEEEEEecC-Cc--CCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHH
Q 029829 85 PLGRILYKAPSDGKWGEHELDYLLFIVRD-VS--VNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNF 161 (187)
Q Consensus 85 ~~~~~~y~~~~~~~~~e~e~~~vf~~~~~-~~--~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~ 161 (187)
......|..+...... +.+.++|.+... .. ...+++|+.+++|++++++.++ +..+.|..+.++..+
T Consensus 268 ~~~~~~~~~~~~~~~~-~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~---------~~~~~~~~~~il~~~ 337 (341)
T 2qjo_A 268 IVDSHVFDAPGRSLRG-RTITHAYFIQLPGGELPAVKGGDDAQKAWWMSLADLYAQ---------EEQIYEDHFQIIQHF 337 (341)
T ss_dssp EEEEEEECCTTSCTTS-CEEEEEEEEECCSSSCCCCC------CEEEEEHHHHHHT---------GGGBCTTHHHHHHHH
T ss_pred ccceEEEeCCCCCCCC-cEEEEEEEEEecCCCcCccCCCCceeeEEEeeHHHHhhh---------hhhhchHHHHHHHHH
Confidence 0112234433221111 345566666542 22 1245689999999999999874 135788888888877
Q ss_pred H
Q 029829 162 L 162 (187)
Q Consensus 162 l 162 (187)
+
T Consensus 338 ~ 338 (341)
T 2qjo_A 338 V 338 (341)
T ss_dssp C
T ss_pred H
Confidence 4
No 58
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.70 E-value=3.8e-17 Score=129.77 Aligned_cols=111 Identities=13% Similarity=0.046 Sum_probs=75.9
Q ss_pred CCceEEEEEEE-eCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCC
Q 029829 4 CVPNIFSILGF-VSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDE 82 (187)
Q Consensus 4 ~~h~av~v~i~-~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~ 82 (187)
..++++++++. +.+|+|||+||.. .||.|++| ||++++||+ +++||+||++||||+.+...
T Consensus 39 ~~~~~~~vi~~~~~~~~vLLv~r~~----~~g~W~lP-gG~ve~gEt---------~~eaa~REl~EEtGl~~~~~---- 100 (194)
T 2fvv_A 39 YKKRAACLCFRSESEEEVLLVSSSR----HPDRWIVP-GGGMEPEEE---------PSVAAVREVCEEAGVKGTLG---- 100 (194)
T ss_dssp CEEEEEEEEESSTTCCEEEEEECSS----CTTSEECS-EEECCTTCC---------HHHHHHHHHHHHHCEEEEEE----
T ss_pred ccccEEEEEEEECCCCEEEEEEEeC----CCCcEECC-CCcCCCCcC---------HHHHHHHHHHHHhCCccccc----
Confidence 34455555552 4568999999864 37999997 799999999 89999999999999988643
Q ss_pred eeeeeEEEEEccCCCCcceeEEEEEEEEecCCcC---CCCccccceEEEecHHHHHHHHHh
Q 029829 83 FTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSV---NPNPDEVAEYKYVNREQLKELLRK 140 (187)
Q Consensus 83 l~~~~~~~y~~~~~~~~~e~e~~~vf~~~~~~~~---~~~~~Ev~~~~Wv~~~el~~~l~~ 140 (187)
.+++.+.+ .. . ....++|.+...... ..+.++..+++|++++++.+++..
T Consensus 101 -~~l~~~~~--~~--~---~~~~~~f~~~~~~~~~~~~~~~e~~~~~~W~~~~el~~~l~~ 153 (194)
T 2fvv_A 101 -RLVGIFEN--QE--R---KHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQY 153 (194)
T ss_dssp -EEEEEEEE--TT--T---TEEEEEEEEEEEEECSSCHHHHHHCCCEEEEEHHHHHHHHTT
T ss_pred -eEEEEEEc--CC--C---ceEEEEEEEEEccccCCCCCcccccceEEEEEHHHHHHHHhc
Confidence 44665442 11 1 123455555432211 111234578999999999998764
No 59
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.69 E-value=3.9e-17 Score=132.65 Aligned_cols=111 Identities=16% Similarity=0.079 Sum_probs=79.2
Q ss_pred ceEEEEEEE---eCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCC
Q 029829 6 PNIFSILGF---VSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDE 82 (187)
Q Consensus 6 h~av~v~i~---~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~ 82 (187)
+.+|+++|+ +.+++|||++|+.. .++|.|++| ||++++||+ +.+||+||+.||||+.+...
T Consensus 13 ~v~v~~vi~~~~~~~~~vLLv~r~~~--~~~g~w~lP-GG~ve~gEs---------~~~Aa~REl~EEtGl~~~~~---- 76 (226)
T 2fb1_A 13 YLGIDCIIFGFNEGEISLLLLKRNFE--PAMGEWSLM-GGFVQKDES---------VDDAAKRVLAELTGLENVYM---- 76 (226)
T ss_dssp EEEEEEEEEEEETTEEEEEEEECSSS--SSTTCEECE-EEECCTTSC---------HHHHHHHHHHHHHCCCSCEE----
T ss_pred eEEEEEEEEEEeCCCCEEEEEECcCC--CCCCCEECC-eeccCCCCC---------HHHHHHHHHHHHHCCCCCce----
Confidence 467888887 45679999999763 568999997 799999999 89999999999999988642
Q ss_pred eeeeeEEEEEccCCCCcceeEEEEEEEEecC-CcCCCCccccceEEEecHHHHHH
Q 029829 83 FTPLGRILYKAPSDGKWGEHELDYLLFIVRD-VSVNPNPDEVAEYKYVNREQLKE 136 (187)
Q Consensus 83 l~~~~~~~y~~~~~~~~~e~e~~~vf~~~~~-~~~~~~~~Ev~~~~Wv~~~el~~ 136 (187)
..++.+ ..+... ...+.+..+|.+... .....+.+|+.+++|++++++.+
T Consensus 77 -~~l~~~--~~~~r~-~~~~~v~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el~~ 127 (226)
T 2fb1_A 77 -EQVGAF--GAIDRD-PGERVVSIAYYALININEYDRELVQKHNAYWVNINELPA 127 (226)
T ss_dssp -EEEEEE--CCTTSS-SSSCEEEEEEEEECCTTSSCHHHHHHTTEEEEETTSCCC
T ss_pred -EEEEEe--CCCCcC-CCceEEEEEEEEEecCcccccCCccccceEEEEHHHhhh
Confidence 345543 222211 111345556666543 22333457999999999998763
No 60
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.69 E-value=2.2e-16 Score=134.54 Aligned_cols=135 Identities=13% Similarity=0.117 Sum_probs=93.3
Q ss_pred CceEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCee
Q 029829 5 VPNIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 84 (187)
Q Consensus 5 ~h~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~ 84 (187)
.|.+++++|+ .+|+|||+||.... .+|.|++| ||++++||+ +++||+||+.||||+.+....+. ..
T Consensus 207 ~~~~v~~vv~-~~~~vLL~~r~~~~--~~g~w~lP-gG~ve~gEt---------~~~aa~REl~EEtGl~v~~~~~~-~~ 272 (352)
T 2qjt_B 207 NFVTVDALVI-VNDHILMVQRKAHP--GKDLWALP-GGFLECDET---------IAQAIIRELFEETNINLTHEQLA-IA 272 (352)
T ss_dssp EEEEEEEEEE-ETTEEEEEEESSSS--STTCEECS-EEECCTTSC---------HHHHHHHHHHHHHCCSCCHHHHH-HH
T ss_pred CceEEEEEEE-ECCEEEEEEEcCCC--CCCeEECC-CCcCCCCCC---------HHHHHHHHHHHhhCCCcccchhc-ce
Confidence 3567788887 46899999997643 58999997 799999999 89999999999999998643210 01
Q ss_pred eeeEEEEEccCCCCcceeEEEEEEEEec-CCc--CC-CCccccceEEEecH-HHHHHHHHhccCCCCCcccChhHHHHHH
Q 029829 85 PLGRILYKAPSDGKWGEHELDYLLFIVR-DVS--VN-PNPDEVAEYKYVNR-EQLKELLRKADAGEEGLKLSPWFRLVVD 159 (187)
Q Consensus 85 ~~~~~~y~~~~~~~~~e~e~~~vf~~~~-~~~--~~-~~~~Ev~~~~Wv~~-~el~~~l~~~~~~~~~~~~~p~~~~~~~ 159 (187)
+.+...|..+...... +...++|++.. ... +. .+.+|+.+++|+++ +++.++ +..+.|..+.++.
T Consensus 273 ~~~~~~~~~~~~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~~el~~~---------~~~~~~~~~~il~ 342 (352)
T 2qjt_B 273 KRCEKVFDYPDRSVRG-RTISHVGLFVFDQWPSLPEINAADDAKDVKWISLGSNIKNI---------CDRMLEDHYQIIT 342 (352)
T ss_dssp EEEEEEECCTTSCTTS-EEEEEEEEEEECSCSSCCCCCCCTTEEEEEEEESSHHHHHT---------TTSBSTTHHHHHH
T ss_pred eeeeEEecCCCCCCCc-cEEEEEEEEEEeCCCCCCccCCCccceEEEEecHHHHHHhh---------hhhhChhHHHHHH
Confidence 1222334443322111 33455555543 222 22 34689999999999 999875 2368888999888
Q ss_pred HHHH
Q 029829 160 NFLF 163 (187)
Q Consensus 160 ~~l~ 163 (187)
.++.
T Consensus 343 ~~~~ 346 (352)
T 2qjt_B 343 ILLE 346 (352)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8854
No 61
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.69 E-value=1.5e-16 Score=132.74 Aligned_cols=103 Identities=16% Similarity=0.159 Sum_probs=78.3
Q ss_pred EEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCeeeeeE
Q 029829 9 FSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGR 88 (187)
Q Consensus 9 v~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~~~~ 88 (187)
+.+++++.+|+|||+||+... +|+|++| ||++++||+ +++||+||+.||||+.+.. +.+++.
T Consensus 142 ~viv~v~~~~~vLL~rr~~~~---~g~w~lP-gG~vE~GEt---------~eeAa~REv~EEtGl~v~~-----~~~~~~ 203 (269)
T 1vk6_A 142 CIIVAIRRDDSILLAQHTRHR---NGVHTVL-AGFVEVGET---------LEQAVAREVMEESGIKVKN-----LRYVTS 203 (269)
T ss_dssp EEEEEEEETTEEEEEEETTTC---SSCCBCE-EEECCTTCC---------HHHHHHHHHHHHHCCEEEE-----EEEEEE
T ss_pred EEEEEEEeCCEEEEEEecCCC---CCcEECC-cCcCCCCCC---------HHHHHHHHHHHHhCceeee-----EEEEEE
Confidence 334445567899999997543 6999996 799999999 8999999999999999874 356766
Q ss_pred EEEEccCCCCcceeEEEEEEEEec-CCcCCCCccccceEEEecHHHHHH
Q 029829 89 ILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKE 136 (187)
Q Consensus 89 ~~y~~~~~~~~~e~e~~~vf~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~ 136 (187)
+.+..+ +...++|.+.. +..+.++.+|+.+++|++++++..
T Consensus 204 ~~~~~~-------~~~~~~f~a~~~~~~~~~~~~E~~~~~W~~~~el~~ 245 (269)
T 1vk6_A 204 QPWPFP-------QSLMTAFMAEYDSGDIVIDPKELLEANWYRYDDLPL 245 (269)
T ss_dssp EEEETT-------EEEEEEEEEEEEECCCCCCTTTEEEEEEEETTSCCS
T ss_pred EecCCC-------CEEEEEEEEEECCCCcCCCCcceEEEEEEEHHHhhh
Confidence 554432 23556666654 345667778999999999999864
No 62
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.68 E-value=2.9e-16 Score=119.04 Aligned_cols=121 Identities=12% Similarity=0.057 Sum_probs=82.7
Q ss_pred EEEEEeC---CCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHH-HHHHHHHHHHhC-CCccCCCCCCee
Q 029829 10 SILGFVS---YSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVR-NAAQRKLLDELG-ICAEDVPVDEFT 84 (187)
Q Consensus 10 ~v~i~~~---~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~-~Aa~REl~EE~G-l~~~~~~~~~l~ 84 (187)
.++|.+. +|+|||+||+.. ..++|+|++| ||++++||+ +. +||+||+.|||| +.+... .
T Consensus 23 ~~vi~~~~~~~~~vLl~~R~~~-~~~~g~w~~P-gG~~e~gE~---------~~~~a~~REl~EE~g~l~~~~~-----~ 86 (155)
T 1x51_A 23 TCVLEQPGALGAQILLVQRPNS-GLLAGLWEFP-SVTWEPSEQ---------LQRKALLQELQRWAGPLPATHL-----R 86 (155)
T ss_dssp EEEEEEECSSSEEEEEEECCCC-STTCSCEECC-EEECCSSHH---------HHHHHHHHHHHHHSCCCCSTTC-----E
T ss_pred EEEEEecCCCCCEEEEEECCCC-CCCCceecCC-ccccCCCCC---------HHHHHHHHHHHHHhCCcceeee-----e
Confidence 3444454 589999999865 3689999998 689999998 75 999999999999 776532 3
Q ss_pred eeeEEEEEccCCCCcceeEEEEEEEEecCCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHHHH
Q 029829 85 PLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLF 163 (187)
Q Consensus 85 ~~~~~~y~~~~~~~~~e~e~~~vf~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~l~ 163 (187)
+++.+.+..+. . +...++|.+..... .++..|..+++|++++++.++ .+.+..+.+++.++.
T Consensus 87 ~l~~~~~~~~~--~---~~~~~~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~-----------~~~~~~~~~l~~~~~ 148 (155)
T 1x51_A 87 HLGEVVHTFSH--I---KLTYQVYGLALEGQ-TPVTTVPPGARWLTQEEFHTA-----------AVSTAMKKVFRVYQG 148 (155)
T ss_dssp ECCCBCCBCSS--C---EEEEEEEEEECSSC-CCCCCCCTTEEEEEHHHHHHS-----------CCCHHHHHHHHHHHH
T ss_pred ecceEEEecCC--c---cEEEEEEEEEEcCC-CCCCCCCCccEEccHHHhhhc-----------CCCHHHHHHHHHHHh
Confidence 34443332211 1 22346676664321 133457889999999999863 467777777776643
No 63
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.68 E-value=1.9e-16 Score=125.93 Aligned_cols=113 Identities=19% Similarity=0.094 Sum_probs=84.1
Q ss_pred eEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCeeee
Q 029829 7 NIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPL 86 (187)
Q Consensus 7 ~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~~ 86 (187)
.+|+|++++.+ +|||++|... ...+|.|++| ||++++||+ +.+||+||+.||||+.+.. +.++
T Consensus 50 ~av~vl~~~~~-~vLLvrq~r~-~~~~~~welP-gG~ve~gEs---------~~~aA~REl~EEtGl~~~~-----~~~l 112 (198)
T 1vhz_A 50 EAVMIVPIVDD-HLILIREYAV-GTESYELGFS-KGLIDPGES---------VYEAANRELKEEVGFGAND-----LTFL 112 (198)
T ss_dssp CEEEEEEEETT-EEEEEEEEET-TTTEEEEECE-EEECCTTCC---------HHHHHHHHHHHHHSEEEEE-----EEEE
T ss_pred CEEEEEEEECC-EEEEEEcccC-CCCCcEEEeC-cccCCCCcC---------HHHHHHHHHHHHHCCCcCc-----eEEE
Confidence 47888888876 9999876543 2468899997 799999999 8999999999999998864 3456
Q ss_pred eEEEEEccCCCCcceeEEEEEEEEec--CCcCCCCccccceEEEecHHHHHHHHHhc
Q 029829 87 GRILYKAPSDGKWGEHELDYLLFIVR--DVSVNPNPDEVAEYKYVNREQLKELLRKA 141 (187)
Q Consensus 87 ~~~~y~~~~~~~~~e~e~~~vf~~~~--~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~ 141 (187)
+.+.+. + +.. .+.+++|++.. ......+++|+.++.|++++++.+++..+
T Consensus 113 ~~~~~~-~---~~~-~~~~~~f~a~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~ 164 (198)
T 1vhz_A 113 KKLSMA-P---SYF-SSKMNIVVAQDLYPESLEGDEPEPLPQVRWPLAHMMDLLEDP 164 (198)
T ss_dssp EEEECC-T---TTC-CCEEEEEEEEEEEECCCCCCCSSCCCEEEEEGGGGGGGGGCT
T ss_pred EEEeCC-C---Ccc-CcEEEEEEEEeCCcccCCCCCCceEEEEEEEHHHHHHHHHcC
Confidence 654322 1 111 33556676653 23345677899999999999999998865
No 64
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.68 E-value=2.8e-16 Score=127.31 Aligned_cols=119 Identities=9% Similarity=-0.012 Sum_probs=80.5
Q ss_pred CceEEEEEEEeC-CCeEEEEE--ecCCC----------------------------CCCCCceeeccccCCCC-CCChhh
Q 029829 5 VPNIFSILGFVS-YSVMSGQQ--RSGTK----------------------------VTFPLVWTNTCCSHPLY-RESELI 52 (187)
Q Consensus 5 ~h~av~v~i~~~-~g~vLL~r--Rs~~k----------------------------~~~pG~W~~~~gGhve~-gEs~~~ 52 (187)
.|.+|+|++++. ++++||.| |.... ...++.|++| ||++++ ||+
T Consensus 35 ~~~aV~vl~~~~~~~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~welP-gG~ve~~gEs--- 110 (218)
T 3q91_A 35 THDSVTVLLFNSSRRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPGSAGVTVELC-AGLVDQPGLS--- 110 (218)
T ss_dssp CCCEEEEEEEEGGGTEEEEEEEECHHHHHHHTC-------------------------CCEEEECE-EEECCSSSCC---
T ss_pred cCCeEEEEEEECCCCEEEEEEccccccccccccccccccccccccccccccccccccCCCeEEECC-cceeCCCCCC---
Confidence 367999999994 57888865 42210 1127899997 799999 999
Q ss_pred hhhhhcHHHHHHHHHHHHhCCCccCCCCCCeeeeeEEEEEccCCCCcceeEEEEEEEEecC-------CcCCCCccccce
Q 029829 53 EENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRD-------VSVNPNPDEVAE 125 (187)
Q Consensus 53 ~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~~~~~~y~~~~~~~~~e~e~~~vf~~~~~-------~~~~~~~~Ev~~ 125 (187)
+.+||+||+.||||+.+... .+.+++.+.. .+ +.. .+.+++|++... ....++++|+.+
T Consensus 111 ------~~eaA~REl~EEtGl~~~~~---~l~~l~~~~~-~~---g~~-~~~~~~f~a~~~~~~~~~~~~~~~d~~E~~e 176 (218)
T 3q91_A 111 ------LEEVACKEAWEECGYHLAPS---DLRRVATYWS-GV---GLT-GSRQTMFYTEVTDAQRSGPGGGLVEEGELIE 176 (218)
T ss_dssp ------HHHHHHHHHHHHHCBCCCGG---GCEEEEEEEE-C------C-CEEEEEEEEEECGGGBCC---------CCEE
T ss_pred ------HHHHHHHHHHHHhCCccccC---ceEEEEEEec-CC---Ccc-ceEEEEEEEEECCcccccCCCCCCCCCcEEE
Confidence 89999999999999998321 2456766422 21 122 345677777642 124567789999
Q ss_pred EEEecHHHHHHHHHhc
Q 029829 126 YKYVNREQLKELLRKA 141 (187)
Q Consensus 126 ~~Wv~~~el~~~l~~~ 141 (187)
+.|++++++.+++..+
T Consensus 177 v~wv~l~el~~~i~~g 192 (218)
T 3q91_A 177 VVHLPLEGAQAFADDP 192 (218)
T ss_dssp EEEEEGGGHHHHHHCT
T ss_pred EEEEEHHHHHHHHHcC
Confidence 9999999999999986
No 65
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.67 E-value=6.6e-16 Score=121.95 Aligned_cols=115 Identities=13% Similarity=0.039 Sum_probs=81.3
Q ss_pred CceEEEEEEEeC-CCeEEEEEecCCC----CC-CCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCC
Q 029829 5 VPNIFSILGFVS-YSVMSGQQRSGTK----VT-FPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDV 78 (187)
Q Consensus 5 ~h~av~v~i~~~-~g~vLL~rRs~~k----~~-~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~ 78 (187)
.|.+|++++++. +|++||.++.... .. .++.|++| ||+++ ||+ +.+||+||+.||||+.+..
T Consensus 44 ~~~av~v~~~~~~~~~vlLv~~~r~~~~~~~~~~~~~w~lP-gG~ve-gE~---------~~~aa~REl~EEtG~~~~~- 111 (191)
T 3o6z_A 44 RGNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESC-AGLLD-NDE---------PEVCIRKEAIEETGYEVGE- 111 (191)
T ss_dssp CCCEEEEEEEETTTTEEEEEEEECHHHHTTTCTTCEEEECE-EEECC-SSC---------HHHHHHHHHHHHC-CCCSC-
T ss_pred cCCEEEEEEEECCCCEEEEEEcCCccccccCCCCCeEEEec-ceEeC-CCC---------HHHHHHHHHHHHhCCccCc-
Confidence 456899999985 5899987754311 11 57899997 69999 999 8999999999999999864
Q ss_pred CCCCeeeeeEEEEEccCCCCcceeEEEEEEEEecCCc------CCCCccccceEEEecHHHHHHHHHhc
Q 029829 79 PVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVS------VNPNPDEVAEYKYVNREQLKELLRKA 141 (187)
Q Consensus 79 ~~~~l~~~~~~~y~~~~~~~~~e~e~~~vf~~~~~~~------~~~~~~Ev~~~~Wv~~~el~~~l~~~ 141 (187)
+.+++.+ |..+ +.. .+..++|++..... ..+ ++|+.+++|++++++.+++..+
T Consensus 112 ----~~~l~~~-~~~~---~~~-~~~~~~f~~~~~~~~~~~~~~~~-~~E~~~~~w~~~~el~~~~~~g 170 (191)
T 3o6z_A 112 ----VRKLFEL-YMSP---GGV-TELIHFFIAEYSDNQRANAGGGV-EDEAIEVLELPFSQALEMIKTG 170 (191)
T ss_dssp ----EEEEEEE-ESCT---TTB-CCEEEEEEEECCTTCC---------CCSSEEEEEEHHHHHHHHHHS
T ss_pred ----EEEEEEE-EeCC---Ccc-CcEEEEEEEEEcccccccCCCCC-CCcEEEEEEEEHHHHHHHHHcC
Confidence 3556653 2222 222 34567777764211 122 6899999999999999999986
No 66
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.63 E-value=8.2e-15 Score=119.86 Aligned_cols=148 Identities=11% Similarity=0.054 Sum_probs=100.0
Q ss_pred CCCceEEEEEEEeC-CC--eEEEEEecCCCCCCCCceeeccccCCCCCCChh-----------hhhhhhcHHHHHHHHHH
Q 029829 3 KCVPNIFSILGFVS-YS--VMSGQQRSGTKVTFPLVWTNTCCSHPLYRESEL-----------IEENALGVRNAAQRKLL 68 (187)
Q Consensus 3 g~~h~av~v~i~~~-~g--~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~-----------~~~~~~~~~~Aa~REl~ 68 (187)
..++.|+.|++.+. +| +|||+||+.+...+||.|.+| ||+++++|++. ..+.+..+..||+||+.
T Consensus 6 ~~r~aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fP-GG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~ 84 (232)
T 3qsj_A 6 DIRKAATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFP-GGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETA 84 (232)
T ss_dssp CEEEEEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECS-EEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHH
T ss_pred CCcceEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECC-ceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHH
Confidence 34455555556554 34 899999998877789999998 79999988620 11222346899999999
Q ss_pred HHhCCCccCCC-------------------------------------CCCeeeeeEEEEEccCCCCcceeEEE-EEEEE
Q 029829 69 DELGICAEDVP-------------------------------------VDEFTPLGRILYKAPSDGKWGEHELD-YLLFI 110 (187)
Q Consensus 69 EE~Gl~~~~~~-------------------------------------~~~l~~~~~~~y~~~~~~~~~e~e~~-~vf~~ 110 (187)
|||||.+.... ++.|.+..+ +..|.. .. +.++ ++|++
T Consensus 85 EE~Gl~l~~~~~~~~~~~~~~~~~~r~~l~~~~~~f~~~~~~~~l~~~~~~L~~~ar--WiTP~~--~~-rRfdT~FFla 159 (232)
T 3qsj_A 85 EEIGWLLAVRDGEGTKMDTPLAPDEQADLCKGGDALSAWLSARGLAFDLGLLRRIGR--FVTPPT--QP-VRFDTRFFLC 159 (232)
T ss_dssp HHHSCCCSEECTTCCBCCSCCCHHHHHHHTTCTTHHHHHHHTTTCEEBGGGCEEEEE--EECCTT--SS-SEEEEEEEEE
T ss_pred HHhCceeccccccCcccChhhHHHHHHHHHcCchhHHHHHHHCCCccChhhceeeEE--EcCCcC--Cc-eeEEEEEEEE
Confidence 99999764311 112333333 333332 12 3344 44555
Q ss_pred ecCCc--CCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHH
Q 029829 111 VRDVS--VNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNF 161 (187)
Q Consensus 111 ~~~~~--~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~ 161 (187)
..+.. +..+.+|+.++.|++++++.+...++ .-.+.|....++..+
T Consensus 160 ~lpq~~~v~~d~~E~~~~~W~~p~eal~~~~~G-----~i~L~pPT~~~L~~L 207 (232)
T 3qsj_A 160 VGQHLGEPRLHGAELDAALWTPARDMLTRIQSG-----ELPAVRPTIAVLKAL 207 (232)
T ss_dssp ECSSCCCCCCCSSSEEEEEEEEHHHHHHHHHTT-----SSCCCHHHHHHHHHH
T ss_pred ECCCCCCCCCCCCceEEEEEEcHHHHHHHHHcC-----CceechhHHHHHHHH
Confidence 44432 25678999999999999999999886 357888888887765
No 67
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.63 E-value=1.6e-15 Score=126.46 Aligned_cols=151 Identities=13% Similarity=0.088 Sum_probs=99.6
Q ss_pred ceEEEEEEEe--C---CCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCC
Q 029829 6 PNIFSILGFV--S---YSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPV 80 (187)
Q Consensus 6 h~av~v~i~~--~---~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~ 80 (187)
+.+|.++|+. . +++|||++|+.. .++|.|++| ||++++||+ +.+||+||+.||||+.+....
T Consensus 39 ~v~v~~vv~~~~~~~~~~~VLLv~R~~~--p~~g~W~lP-GG~ve~gEs---------~~~AA~REl~EEtGl~v~~~~- 105 (273)
T 2fml_A 39 SLTVDMVLLCYNKEADQLKVLLIQRKGH--PFRNSWALP-GGFVNRNES---------TEDSVLRETKEETGVVISQEN- 105 (273)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEECSS--SSTTCEECC-EEECCTTSC---------HHHHHHHHHHHHHCCCCCGGG-
T ss_pred ceEEEEEEEEEcCCCCCcEEEEEEccCC--CCCCcEECC-ccCCCCCcC---------HHHHHHHHHHHHHCCCCCcCc-
Confidence 3467777764 2 348999999865 478999998 799999999 899999999999998765432
Q ss_pred CCeeeeeEEEEEccCCCCcceeEEEEEEEEecCCcCCCCccccceEEEecHHHHHHHHHhccC------------CCCCc
Q 029829 81 DEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADA------------GEEGL 148 (187)
Q Consensus 81 ~~l~~~~~~~y~~~~~~~~~e~e~~~vf~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~------------~~~~~ 148 (187)
+..++. |..+..+. ..+.+.++|.+..........+|+.+++|++++++.+.+..+.. .-...
T Consensus 106 --l~~l~~--~~~~~r~~-~~~~~~~~y~a~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~e~~~l~~~~~~~~~~~~~ 180 (273)
T 2fml_A 106 --IEQLHS--FSRPDRDP-RGWVVTVSYLAFIGEEPLIAGDDAKEVHWFNLERHGQHITLSHEDVEITLDLKTAASLGKD 180 (273)
T ss_dssp --EEEEEE--ECCTTSST-TSSEEEEEEEEECCCCCCCCCTTEEEEEEEEEEEETTEEEEEETTEEEEEETTTCCBCSSS
T ss_pred --EEEEEE--EcCCCCCC-CceEEEEEEEEEeCCCCCCCCcceeeEEEEEhhHhhhhhccccchhhhccccccccccCCC
Confidence 334444 33332111 11445666766653322345679999999999987655421100 00012
Q ss_pred ccChhHHHHHHHHHHHHHhHhccccc
Q 029829 149 KLSPWFRLVVDNFLFKWWDHLEKGTL 174 (187)
Q Consensus 149 ~~~p~~~~~~~~~l~~~~~~~~~~~~ 174 (187)
.+......++..++.+-..+++-+.+
T Consensus 181 ~LafdH~~Il~~al~rlr~kl~y~~i 206 (273)
T 2fml_A 181 TLAFDHSEIIIKAFNRVVDKMEHEPQ 206 (273)
T ss_dssp CCSTTHHHHHHHHHHHHHHHTTTCCG
T ss_pred cccccHHHHHHHHHHHHHHHhcCCcH
Confidence 45555677888888877777776654
No 68
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.62 E-value=2.3e-15 Score=129.72 Aligned_cols=121 Identities=16% Similarity=0.142 Sum_probs=79.1
Q ss_pred CeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCeeeeeEEEEEccCCC
Q 029829 18 SVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDG 97 (187)
Q Consensus 18 g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~~~~~~y~~~~~~ 97 (187)
.+|||++|.. .|.|++| ||++++||+ +.+||+||++||||+.+... .+++.+.|..+..+
T Consensus 38 ~~vLLv~r~~-----~g~W~lP-gG~ve~gEs---------~~~AA~REl~EEtGl~~~~~-----~~l~~~~~~~~~~g 97 (364)
T 3fjy_A 38 IEVCIVHRPK-----YDDWSWP-KGKLEQNET---------HRHAAVREIGEETGSPVKLG-----PYLCEVEYPLSEEG 97 (364)
T ss_dssp EEEEEEEETT-----TTEEECC-EEECCTTCC---------HHHHHHHHHHHHHSCCEEEE-----EEEEEEC-------
T ss_pred eEEEEEEcCC-----CCCEECC-cCCCCCCCC---------HHHHHHHHHHHHhCCeeeec-----cccceEEEeccCCC
Confidence 4899999843 3899997 699999999 89999999999999988643 34665555544321
Q ss_pred Ccc--------eeEEEEEEEEecC-C------------cCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHH
Q 029829 98 KWG--------EHELDYLLFIVRD-V------------SVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRL 156 (187)
Q Consensus 98 ~~~--------e~e~~~vf~~~~~-~------------~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~ 156 (187)
... .+...++|.+... . ...++++|+.+++|++++++.+++ ..|..+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~-----------~~~~~r~ 166 (364)
T 3fjy_A 98 KKTRHSHDCTADTKHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKIL-----------SHSTDKD 166 (364)
T ss_dssp --------------CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHC-----------SCHHHHH
T ss_pred cccccccccccCceEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHh-----------cchhhHH
Confidence 110 1234455555532 1 123566899999999999999763 3456677
Q ss_pred HHHHHHHHHHhHhcccc
Q 029829 157 VVDNFLFKWWDHLEKGT 173 (187)
Q Consensus 157 ~~~~~l~~~~~~~~~~~ 173 (187)
+++.+ .+.++.|.
T Consensus 167 il~~~----~~~l~~g~ 179 (364)
T 3fjy_A 167 TLAVF----VDRVQEGA 179 (364)
T ss_dssp HHHHH----HHHHHTTG
T ss_pred HHHHH----HHHhccCC
Confidence 77777 44444443
No 69
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.62 E-value=9.5e-16 Score=127.87 Aligned_cols=109 Identities=12% Similarity=0.027 Sum_probs=73.1
Q ss_pred eEEEEEEEeC-CCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCeee
Q 029829 7 NIFSILGFVS-YSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 85 (187)
Q Consensus 7 ~av~v~i~~~-~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~ 85 (187)
.++++++++. +|+|||+||.. .||.|++| ||++++||+ +.+||+||+.||||+.+..+..
T Consensus 102 ~~v~avv~~~~~~~vLLv~r~~----~~g~W~lP-gG~ve~gEs---------~~eAA~REl~EEtGl~~~~l~~----- 162 (271)
T 2a6t_A 102 PVRGAIMLDMSMQQCVLVKGWK----ASSGWGFP-KGKIDKDES---------DVDCAIREVYEETGFDCSSRIN----- 162 (271)
T ss_dssp CEEEEEEBCSSSSEEEEEEESS----TTCCCBCS-EEECCTTCC---------HHHHHHHHHHHHHCCCCTTTCC-----
T ss_pred CeEEEEEEECCCCEEEEEEEeC----CCCeEECC-cccCCCCcC---------HHHHHHHHHHHHhCCCceeeee-----
Confidence 4678888886 48999999864 36999987 799999999 8999999999999999876321
Q ss_pred eeEEEEEccCCCCcceeEEEEEEEEec---CCcCCC-CccccceEEEecHHHHHHHHHh
Q 029829 86 LGRILYKAPSDGKWGEHELDYLLFIVR---DVSVNP-NPDEVAEYKYVNREQLKELLRK 140 (187)
Q Consensus 86 ~~~~~y~~~~~~~~~e~e~~~vf~~~~---~~~~~~-~~~Ev~~~~Wv~~~el~~~l~~ 140 (187)
+. .|..+. .. ...+++|++.. +....+ +.+|+.+++|++++++.++...
T Consensus 163 ~~--~~~~~~---~~-~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 215 (271)
T 2a6t_A 163 PN--EFIDMT---IR-GQNVRLYIIPGISLDTRFESRTRKEISKIEWHNLMDLPTFKKN 215 (271)
T ss_dssp TT--CEEEEE---ET-TEEEEEEEECCCCTTCCCC------EEEEEEEEGGGSTTCC--
T ss_pred ee--eeccCC---cC-CceEEEEEEEEecCcccCCCCCccceeEEEEEEHHHHHHHHhc
Confidence 21 122211 01 12445565543 122233 5689999999999999876443
No 70
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.60 E-value=2.7e-15 Score=120.16 Aligned_cols=114 Identities=12% Similarity=0.041 Sum_probs=77.5
Q ss_pred ceEEEEEEEeCC----CeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCC
Q 029829 6 PNIFSILGFVSY----SVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVD 81 (187)
Q Consensus 6 h~av~v~i~~~~----g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~ 81 (187)
+.+|+|+.+..+ ++|||.++.... ..++.|++| ||++++||+ +.+||+||+.||||+.+...
T Consensus 61 ~~av~v~~v~~~~~~~~~vlLv~q~R~~-~~~~~welP-gG~ve~gEs---------~~~aA~REl~EEtGl~~~~~--- 126 (212)
T 2dsc_A 61 ADGVAVIPVLQRTLHYECIVLVKQFRPP-MGGYCIEFP-AGLIDDGET---------PEAAALRELEEETGYKGDIA--- 126 (212)
T ss_dssp CSEEEEEEEEECTTSCCEEEEEEEEEGG-GTEEEEECC-EEECCTTCC---------HHHHHHHHHHHHHCCCCEEE---
T ss_pred CCEEEEEEEEeCCCCCcEEEEEEeecCC-CCCcEEECC-ccccCCCCC---------HHHHHHHHHHHHhCCCccce---
Confidence 457777655322 478886632211 246789997 699999999 89999999999999987643
Q ss_pred CeeeeeEEEEEccCCCCcceeEEEEEEEEec--C-C-----cCCCCccccceEEEecHHHHHHHHHh
Q 029829 82 EFTPLGRILYKAPSDGKWGEHELDYLLFIVR--D-V-----SVNPNPDEVAEYKYVNREQLKELLRK 140 (187)
Q Consensus 82 ~l~~~~~~~y~~~~~~~~~e~e~~~vf~~~~--~-~-----~~~~~~~Ev~~~~Wv~~~el~~~l~~ 140 (187)
..++.+ |..+ +.. ++.+++|++.. . . ...++++|+.++.|++++++.+++..
T Consensus 127 --~~l~~~-~~~~---~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~ 186 (212)
T 2dsc_A 127 --ECSPAV-CMDP---GLS-NCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRLDA 186 (212)
T ss_dssp --EECCCE-ESCT---TTB-CCEEEEEEEEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHHHHHH
T ss_pred --EEeccE-EcCC---Ccc-CceEEEEEEEEeCccccccCCCCCCCCCceEEEEEEEHHHHHHHHHh
Confidence 234433 3222 222 33455665542 1 1 34567789999999999999999873
No 71
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.58 E-value=8.3e-15 Score=126.92 Aligned_cols=118 Identities=8% Similarity=-0.026 Sum_probs=87.3
Q ss_pred eEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCeeee
Q 029829 7 NIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPL 86 (187)
Q Consensus 7 ~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~~ 86 (187)
..+.++|+|.+|+|||+||+... .|+|+|++| ||++++| + +++|+.||+.||+|+.+.... .+
T Consensus 241 ~~~~~vi~~~~g~vLL~rR~~~g-~~~GlWefP-GG~ve~g-t---------~~~al~REl~EE~Gl~v~~~~-----~l 303 (369)
T 3fsp_A 241 PLAVAVLADDEGRVLIRKRDSTG-LLANLWEFP-SCETDGA-D---------GKEKLEQMVGEQYGLQVELTE-----PI 303 (369)
T ss_dssp EEEEEEEECSSSEEEEEECCSSS-TTTTCEECC-EEECSSS-C---------THHHHHHHHTTSSSCCEEECC-----CC
T ss_pred EEEEEEEEeCCCEEEEEECCCCC-CcCCcccCC-CcccCCC-C---------cHHHHHHHHHHHhCCceeeec-----cc
Confidence 35566677788999999998654 599999998 6999999 7 799999999999999987643 35
Q ss_pred eEEEEEccCCCCcceeEEEEEEEEecCCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHH
Q 029829 87 GRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNF 161 (187)
Q Consensus 87 ~~~~y~~~~~~~~~e~e~~~vf~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~ 161 (187)
+.+.+.++. . +...++|.+..... ..|..+++|++++++.++ .+.+..+.+++.+
T Consensus 304 ~~~~h~~~h----~-~~~~~~~~~~~~~~----~~e~~~~~Wv~~~el~~~-----------~l~~~~~~il~~l 358 (369)
T 3fsp_A 304 VSFEHAFSH----L-VWQLTVFPGRLVHG----GPVEEPYRLAPEDELKAY-----------AFPVSHQRVWREY 358 (369)
T ss_dssp CEEEEECSS----E-EEEEEEEEEEECCS----SCCCTTEEEEEGGGGGGS-----------CCCHHHHHHHHHH
T ss_pred ccEEEEcce----E-EEEEEEEEEEEcCC----CCCccccEEeeHHHhhhC-----------CCCHHHHHHHHHH
Confidence 555555432 1 22345666654332 468899999999998753 5677777777765
No 72
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.55 E-value=1.2e-15 Score=122.57 Aligned_cols=101 Identities=18% Similarity=0.088 Sum_probs=73.1
Q ss_pred EeCCCeEEEEEecCCCCCCCCceeeccccCCCCCC-ChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCeeeeeEEEEE
Q 029829 14 FVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRE-SELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYK 92 (187)
Q Consensus 14 ~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gE-s~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~~~~~~y~ 92 (187)
++.+++|||+|| ++|.|++| ||++++|| + +.+||+||+.||||+.+....+..+.+++.+.+.
T Consensus 52 ~~~~~~vLl~~r------~~g~w~~P-GG~ve~gE~t---------~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~ 115 (212)
T 1u20_A 52 VPIRRVLLMMMR------FDGRLGFP-GGFVDTRDIS---------LEEGLKRELEEELGPALATVEVTEDDYRSSQVRE 115 (212)
T ss_dssp EECCEEEEEEEE------TTSCEECS-EEEECTTTSC---------HHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEEEC
T ss_pred EecCCEEEEEEe------CCCeEECC-CcccCCCCCC---------HHHHHHHHHHHHHCCCccccceeeeeEEEecccc
Confidence 355678999998 47999998 69999999 8 8999999999999999876543222355555444
Q ss_pred ccCCCCcceeEEEEEEEEecC-CcC----------CCCccccceEEEecHHHHHH
Q 029829 93 APSDGKWGEHELDYLLFIVRD-VSV----------NPNPDEVAEYKYVNREQLKE 136 (187)
Q Consensus 93 ~~~~~~~~e~e~~~vf~~~~~-~~~----------~~~~~Ev~~~~Wv~~~el~~ 136 (187)
++ .+...++|.+... ..+ ..+.+|+.++.|++++++.+
T Consensus 116 ~~------~~~~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~ 164 (212)
T 1u20_A 116 HP------QKCVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRD 164 (212)
T ss_dssp TT------SCEEEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTT
T ss_pred CC------CcEEEEEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHhhh
Confidence 33 1345677777642 111 23457899999999998854
No 73
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.31 E-value=9e-12 Score=104.77 Aligned_cols=118 Identities=12% Similarity=0.033 Sum_probs=71.5
Q ss_pred eEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCC---------CCCCeeee-eE
Q 029829 19 VMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDV---------PVDEFTPL-GR 88 (187)
Q Consensus 19 ~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~---------~~~~l~~~-~~ 88 (187)
+|||++|.. .|.|++| ||++++||+ +.+||+||+.||||+.+... .+..+... +.
T Consensus 140 ~vLl~~r~~-----~g~W~lP-GG~Ve~GEs---------~~eAA~REl~EETGl~~~~~~~~~~~l~~~l~~l~~~~g~ 204 (292)
T 1q33_A 140 QFVAIKRKD-----CGEWAIP-GGMVDPGEK---------ISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQDHL 204 (292)
T ss_dssp EEEEEECTT-----TCSEECC-CEECCTTCC---------HHHHHHHHHHHHHSCGGGSCSSHHHHHHHHHHHHTTTSEE
T ss_pred EEEEEEecC-----CCcEeCC-CcccCCCCC---------HHHHHHHHHHHHhCCccccccccchhhHHHHHHHhhcccc
Confidence 699999864 3899997 799999999 89999999999999984210 11111100 22
Q ss_pred EEEEccCC-CCcc--eeEEEEEEEEec-CCc-----CCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHH
Q 029829 89 ILYKAPSD-GKWG--EHELDYLLFIVR-DVS-----VNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVD 159 (187)
Q Consensus 89 ~~y~~~~~-~~~~--e~e~~~vf~~~~-~~~-----~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~ 159 (187)
..|..... .... .+....+|.+.. +.. .....+|+.+++|++++++. .+.+..+.++.
T Consensus 205 ~vy~~~~~dpr~~d~~~~~~~~f~~~~~~g~~~~~~~~~~~~E~~~~~W~~~del~-------------~L~~~h~~il~ 271 (292)
T 1q33_A 205 VIYKGYVDDPRNTDNAWMETEAVNYHDETGEIMDNLMLEAGDDAGKVKWVDINDKL-------------KLYASHSQFIK 271 (292)
T ss_dssp EEEEEECCCTTCCSSEEEEEEEEEEEESSSTTTTTCCCCCCTTCSEEEEEECCTTC-------------CCSTTHHHHHH
T ss_pred eeecccccCCCCCcccEEEEEEEEEEeCCCccccccccCCCCccceEEEEEcccCc-------------ccCHhHHHHHH
Confidence 22332111 1110 122333444322 111 12345799999999999975 24566777777
Q ss_pred HHHHH
Q 029829 160 NFLFK 164 (187)
Q Consensus 160 ~~l~~ 164 (187)
.++..
T Consensus 272 ~~~~~ 276 (292)
T 1q33_A 272 LVAEK 276 (292)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77543
No 74
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.28 E-value=2.7e-12 Score=103.70 Aligned_cols=94 Identities=15% Similarity=-0.001 Sum_probs=63.6
Q ss_pred eEEEEEecCCCCCCCCceeeccccCCCCCC-ChhhhhhhhcHHHHHHHHHHHHhCCCccCCCCCCeeeeeEEEEEccCCC
Q 029829 19 VMSGQQRSGTKVTFPLVWTNTCCSHPLYRE-SELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDG 97 (187)
Q Consensus 19 ~vLL~rRs~~k~~~pG~W~~~~gGhve~gE-s~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~~~~~l~~~~~~~y~~~~~~ 97 (187)
++|+++|. +|.|++| ||++++|| + +.+||+||++||||+.+....+..+.++. ..+..
T Consensus 66 ~~ll~~r~------~g~w~lP-GG~ve~gE~t---------~~eaa~REl~EEtGl~~~~~~l~~l~~~~----~~~~~- 124 (217)
T 2xsq_A 66 AILMQMRF------DGRLGFP-GGFVDTQDRS---------LEDGLNRELREELGEAAAAFRVERTDYRS----SHVGS- 124 (217)
T ss_dssp EEEEEEET------TSCEECS-EEECCTTCSS---------HHHHHHHHHHHHHCGGGGGCCCCGGGEEE----EEECS-
T ss_pred cEEEEEcc------CCeEECC-ceecCCCCCC---------HHHHHHHHHHHHHCCCCccceeEEEEEEe----ecCCC-
Confidence 57777764 6899997 79999999 8 89999999999999998743222222221 21111
Q ss_pred CcceeEEEEEEEEecC-CcC----------CCCccccceEEEecHHHHH
Q 029829 98 KWGEHELDYLLFIVRD-VSV----------NPNPDEVAEYKYVNREQLK 135 (187)
Q Consensus 98 ~~~e~e~~~vf~~~~~-~~~----------~~~~~Ev~~~~Wv~~~el~ 135 (187)
.. +.+.++|.+... ..+ ..+..|+.++.|++++++.
T Consensus 125 -~~-~~~~~~f~~~l~~~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~ 171 (217)
T 2xsq_A 125 -GP-RVVAHFYAKRLTLEELLAVEAGATRAKDHGLEVLGLVRVPLYTLR 171 (217)
T ss_dssp -SS-SEEEEEEEEECCHHHHHHHHHHGGGSTTBTTTEEEEEECCCSBCT
T ss_pred -CC-eEEEEEEEEEeccccceecccccccccccCCceeeEEEEEHHHhh
Confidence 11 345566666542 111 3345799999999999875
No 75
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=98.84 E-value=9.5e-09 Score=87.51 Aligned_cols=108 Identities=8% Similarity=-0.017 Sum_probs=71.1
Q ss_pred eEEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHh-CCCccCCCCCCeee
Q 029829 7 NIFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDEL-GICAEDVPVDEFTP 85 (187)
Q Consensus 7 ~av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~-Gl~~~~~~~~~l~~ 85 (187)
..|++++.+ +|+|||+ . -.| |.+| ||.++.++ .++|+||+.||+ |+.+.... .
T Consensus 184 ~~vgaii~~-~g~vLL~--~-----~~G-W~LP-G~~~~~~~-----------~~~a~RE~~EEttGl~v~~~~-----L 237 (321)
T 3rh7_A 184 IRLGAVLEQ-QGAVFLA--G-----NET-LSLP-NCTVEGGD-----------PARTLAAYLEQLTGLNVTIGF-----L 237 (321)
T ss_dssp EEEEEEEES-SSCEEEB--C-----SSE-EBCC-EEEESSSC-----------HHHHHHHHHHHHHSSCEEEEE-----E
T ss_pred ceEEEEEEE-CCEEEEe--e-----CCC-ccCC-cccCCCCh-----------hHHHHHHHHHHhcCCEEeece-----E
Confidence 356666655 6999999 1 137 9998 57765554 369999999997 99997532 2
Q ss_pred eeEEEEEccCCCCcceeEEEEEEEEecCCcCCCCccccceEEEecHHHHHHHHHhccCCCCCcccChhHHHHHHHHHH
Q 029829 86 LGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLF 163 (187)
Q Consensus 86 ~~~~~y~~~~~~~~~e~e~~~vf~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~l~~~~~~~~~~~~~p~~~~~~~~~l~ 163 (187)
++. |..+.. +.+..+|.+.... .+..+++|+++++|... ....|-.+.++++|+.
T Consensus 238 ~~v--~~~~~~-----~~~~i~f~~~~~~------g~~~e~~~f~~~elp~~----------~~~~~~~~~~L~~y~~ 292 (321)
T 3rh7_A 238 YSV--YEDKSD-----GRQNIVYHALASD------GAPRQGRFLRPAELAAA----------KFSSSATADIINRFVL 292 (321)
T ss_dssp EEE--EECTTT-----CCEEEEEEEEECS------SCCSSSEEECHHHHTTC----------EESSHHHHHHHHHHHH
T ss_pred EEE--EEcCCC-----ceEEEEEEEEeCC------CCeeeeEEECHHHCCCc----------ccCCHHHHHHHHHHHH
Confidence 332 444321 2233455565421 11388999999999852 2346889999999943
No 76
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=98.75 E-value=1.2e-08 Score=81.09 Aligned_cols=100 Identities=17% Similarity=0.031 Sum_probs=63.3
Q ss_pred CceEEEEEEEeCC-----C------eEEEEEecCCCCCCCCceeeccccCCCCCC-ChhhhhhhhcHHHHHHHHHHHHhC
Q 029829 5 VPNIFSILGFVSY-----S------VMSGQQRSGTKVTFPLVWTNTCCSHPLYRE-SELIEENALGVRNAAQRKLLDELG 72 (187)
Q Consensus 5 ~h~av~v~i~~~~-----g------~vLL~rRs~~k~~~pG~W~~~~gGhve~gE-s~~~~~~~~~~~~Aa~REl~EE~G 72 (187)
+..+.+++++.++ | .||+|.| +.|.|++| ||+|++|| + +++|+.||+.||+|
T Consensus 20 ~~hach~mlya~~~~~lfg~~p~r~~iLmQ~R------~~G~weFP-GGkVe~gE~t---------~e~aL~REl~EElg 83 (214)
T 3kvh_A 20 WSHSCHAMLYAANPGQLFGRIPMRFSVLMQMR------FDGLLGFP-GGFVDRRFWS---------LEDGLNRVLGLGLG 83 (214)
T ss_dssp CEEEEEEEEEEEEEEEETTTEEEEEEEEEEEE------TTSCEECS-EEEECTTTCC---------HHHHHHHSCCSCC-
T ss_pred ccEeeEEEEEcCCccccccccchhheEEEeee------eCCEEeCC-CccCCCCCCC---------HHHHHHHHHHHhhC
Confidence 4567788887644 2 3788887 56889997 69999999 7 89999999999999
Q ss_pred C-CccCCCCCCeeeeeEEEEEccCCCCcceeEEEEEEEEecC-Cc--------C-CCC-ccccceEEEecH
Q 029829 73 I-CAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRD-VS--------V-NPN-PDEVAEYKYVNR 131 (187)
Q Consensus 73 l-~~~~~~~~~l~~~~~~~y~~~~~~~~~e~e~~~vf~~~~~-~~--------~-~~~-~~Ev~~~~Wv~~ 131 (187)
+ .+... .++..+.+.++ . +...++|.+... +. + ..+ ..||....-||+
T Consensus 84 ~~~V~~~-----~y~~s~~~~yp---~---~V~LHfY~crl~~Ge~~~lE~~A~~A~d~G~EvlGlvRVPl 143 (214)
T 3kvh_A 84 CLRLTEA-----DYLSSHLTEGP---H---RVVAHLYARQLTLEQLHAVEISAVHSRDHGLEVLGLVRVPL 143 (214)
T ss_dssp --CCCGG-----GEEEEEEC----------CEEEEEEEEECCHHHHHHHHHHHHTSTTBTTTEEEEEEECC
T ss_pred Ceeeeee-----eeEEEEeccCC---C---EEEEEEEEEEeeCCccchhhhcccCCcccCceecceEEeee
Confidence 7 34432 34444433332 1 234577777641 11 1 112 357888888886
No 77
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=98.64 E-value=2e-07 Score=74.45 Aligned_cols=118 Identities=8% Similarity=-0.115 Sum_probs=71.6
Q ss_pred CCCCceEEEEEEEeCCC--eEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccC-C
Q 029829 2 HKCVPNIFSILGFVSYS--VMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED-V 78 (187)
Q Consensus 2 ~g~~h~av~v~i~~~~g--~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~-~ 78 (187)
.|++..+.+|++++..+ +|||.|+.. +.|.+| ||.+++||+ .++|++|||.||+|+.... .
T Consensus 55 ~g~R~sV~avil~~~~~~phVLLlq~~~------~~f~LP-GGkle~gE~---------~~eaL~REL~EELg~~~~~~~ 118 (208)
T 3bho_A 55 IGMRRTVEGVLIVHEHRLPHVLLLQLGT------TFFKLP-GGELNPGED---------EVEGLKRLMTEILGRQDGVLQ 118 (208)
T ss_dssp HCSEEEEEEEEEEEETTEEEEEEEEEET------TEEECS-EEECCTTCC---------HHHHHHHHHHHHHCCCC----
T ss_pred hCCceEEEEEEEEcCCCCcEEEEEEcCC------CcEECC-CcccCCCCC---------HHHHHHHHHHHHhCCCcCCCc
Confidence 46778888888888766 798888754 367665 599999999 7999999999999973211 0
Q ss_pred CCCCeeeeeEEEEEccCC---------CCcceeEEEEEEEEecCCcCCCCccccceEEEecHHHHHH
Q 029829 79 PVDEFTPLGRILYKAPSD---------GKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKE 136 (187)
Q Consensus 79 ~~~~l~~~~~~~y~~~~~---------~~~~e~e~~~vf~~~~~~~~~~~~~Ev~~~~Wv~~~el~~ 136 (187)
..+--.++|.+ |+...+ ..+.-.|...+|++.......+.--.--...-+++=|+.+
T Consensus 119 ~~eIge~lg~w-wRp~fet~~YPYlP~Hit~pKE~~kly~V~Lp~~~~f~vPkn~kL~AvPLfely~ 184 (208)
T 3bho_A 119 DWVIDDCIGNW-WRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYD 184 (208)
T ss_dssp -CEEEEEEEEE-EECSSSSCCBSSCCTTCCSCSEEEEEEEEECCSSEEEEEETTCEEEEEEHHHHTT
T ss_pred cEEEhheEEEE-ecCCCCCcCCCCCCcccCchhhheeeeeEecCccceEecCCCCeEEeecHHhhhc
Confidence 11112456663 333221 1122245667777775322111111224456677777643
No 78
>3brc_A Conserved protein of unknown function; methanobacterium thermoautotrophicum, STR genomics, MCSG, PSI-2; 1.60A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=21.15 E-value=2.5e+02 Score=20.68 Aligned_cols=41 Identities=17% Similarity=0.091 Sum_probs=29.2
Q ss_pred EEEEEEEeCCCeEEEEEecCCCCCCCCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHh
Q 029829 8 IFSILGFVSYSVMSGQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDEL 71 (187)
Q Consensus 8 av~v~i~~~~g~vLL~rRs~~k~~~pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~ 71 (187)
...+++.|.+||+|=.--|+ .|+--.++ +++++..|+.|-+
T Consensus 109 GSmLvimD~kGRiLtas~SP--------------s~~iHk~~---------ie~~v~~E~~~AL 149 (156)
T 3brc_A 109 GSLLVIMDSRGRLLSAAMSP--------------PHVIHSME---------VREAVRSEMTHAL 149 (156)
T ss_dssp CEEEEEEETTSCEEEEEEEC--------------CTTTSCCC---------HHHHHHHHHHHHH
T ss_pred ccEEEEEcCCCcEEeeccCc--------------hhhhhccc---------HHHHHHHHHHHHH
Confidence 45567889999999764442 34555666 8999999987653
No 79
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=21.08 E-value=2.3e+02 Score=20.17 Aligned_cols=54 Identities=9% Similarity=-0.020 Sum_probs=35.3
Q ss_pred EEEEeC---CCeEEEEEecCCCCCC---CCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccCC
Q 029829 11 ILGFVS---YSVMSGQQRSGTKVTF---PLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDV 78 (187)
Q Consensus 11 v~i~~~---~g~vLL~rRs~~k~~~---pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~~~ 78 (187)
-+|+|. .-+|||.-+.++..+| .|.|-..- .|++ +.+...||+.+-+|-++...
T Consensus 61 ~~VINkQ~P~~QIWLASp~SGp~hfd~~~~~Wi~~r-----dg~~---------L~~~L~~el~~~~g~~v~~~ 120 (129)
T 3t3l_A 61 TYVINKQTPNKAIWLSSPSSGPKRYDWTGKNWVYSH-----DGVS---------LHELLAAELTKALKTKLDLS 120 (129)
T ss_dssp EEEEEEETTTTEEEEECSSSCCEEEEECSSSEEETT-----TCCB---------HHHHHHHHHHHHHTSCCCCT
T ss_pred EEEEeCCchhhHhheeCCCCCCeeeEecCCEEEECC-----CCch---------HHHHHHHHHHHHhCCceeee
Confidence 345553 2468887663232222 57886542 4555 89999999999999988754
No 80
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=20.51 E-value=1.9e+02 Score=19.76 Aligned_cols=44 Identities=11% Similarity=0.108 Sum_probs=31.0
Q ss_pred CeEEEEEecCCCCCC---CCceeeccccCCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcc
Q 029829 18 SVMSGQQRSGTKVTF---PLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAE 76 (187)
Q Consensus 18 g~vLL~rRs~~k~~~---pG~W~~~~gGhve~gEs~~~~~~~~~~~~Aa~REl~EE~Gl~~~ 76 (187)
-+|+|.-++.+ .+| .|.|-.. ..|++ +.+...+|+.+-+|.++.
T Consensus 58 ~QIWlaSp~sG-~hfd~~~~~Wi~~-----r~g~~---------L~~~L~~e~~~~~g~~v~ 104 (106)
T 1ew4_A 58 HQVWLATKQGG-YHFDLKGDEWICD-----RSGET---------FWDLLEQAATQQAGETVS 104 (106)
T ss_dssp TEEEEECSSCE-EEEEEETTEEEET-----TTCCB---------HHHHHHHHHHHHHTSCCC
T ss_pred hhheEecCCCc-eeeeecCCEEEEC-----CCCch---------HHHHHHHHHHHHhCCCcc
Confidence 36777766655 233 5888544 24455 899999999999998764
Done!