BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029831
(187 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297836915|ref|XP_002886339.1| ribosomal protein S6 family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332180|gb|EFH62598.1| ribosomal protein S6 family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 211
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/128 (59%), Positives = 89/128 (69%), Gaps = 6/128 (4%)
Query: 23 LSQLPSSPLFSFARSLKTFRTNAKSL---LLHKKNSNSVSLTVKAQTLDFSGSFFEGGGF 79
L + S PL SF+ SL+ F + +K + L ++ + VK+Q LDFSG+FFEGG F
Sbjct: 16 LPNVSSQPLLSFSHSLRPFISKSKPICASLQQQQKRDGSQFVVKSQALDFSGTFFEGG-F 74
Query: 80 GSDDDPTSVPPGSVGTATAIEDKEEPQCPPGLRQYETMMVLRPDMSEDERLALTQNCLLL 139
GSDDDPTS PPGS G +TA+EDK EPQCPPGLRQYETM VLRPDMSEDERL LTQ L
Sbjct: 75 GSDDDPTS-PPGS-GVSTALEDKPEPQCPPGLRQYETMAVLRPDMSEDERLGLTQKYEEL 132
Query: 140 GVACMWRY 147
VA Y
Sbjct: 133 LVAGGGMY 140
>gi|15217660|ref|NP_176632.1| 30S ribosomal protein S6 alpha [Arabidopsis thaliana]
gi|75161441|sp|Q8VY91.1|RR6_ARATH RecName: Full=30S ribosomal protein S6 alpha, chloroplastic; Flags:
Precursor
gi|18252237|gb|AAL61951.1| plastid ribosomal protein S6, putative [Arabidopsis thaliana]
gi|21386993|gb|AAM47900.1| plastid ribosomal protein S6, putative [Arabidopsis thaliana]
gi|21553658|gb|AAM62751.1| plastid ribosomal protein S6, putative [Arabidopsis thaliana]
gi|332196127|gb|AEE34248.1| 30S ribosomal protein S6 alpha [Arabidopsis thaliana]
Length = 207
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/120 (60%), Positives = 85/120 (70%), Gaps = 3/120 (2%)
Query: 23 LSQLPSSPLFSFARSLKTFRTNAKSLLLHKKNSNSVSLTVKAQTLDFSGSFFEGGGFGSD 82
L + S PL SF+ SL+ F + +K + + + VK+Q LDFSG+FFEGG FGSD
Sbjct: 15 LPNVSSQPLLSFSHSLRPFISKSKPMCASIQKRDGSQFVVKSQALDFSGTFFEGG-FGSD 73
Query: 83 DDPTSVPPGSVGTATAIEDKEEPQCPPGLRQYETMMVLRPDMSEDERLALTQNCLLLGVA 142
DDPTS P GS G +TA+EDK EPQCPPGLRQYETM VLRPDMSEDERL LTQ L VA
Sbjct: 74 DDPTS-PSGS-GVSTALEDKPEPQCPPGLRQYETMAVLRPDMSEDERLGLTQKYEELLVA 131
>gi|6633831|gb|AAF19690.1|AC009519_24 F1N19.8 [Arabidopsis thaliana]
Length = 231
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/120 (60%), Positives = 85/120 (70%), Gaps = 3/120 (2%)
Query: 23 LSQLPSSPLFSFARSLKTFRTNAKSLLLHKKNSNSVSLTVKAQTLDFSGSFFEGGGFGSD 82
L + S PL SF+ SL+ F + +K + + + VK+Q LDFSG+FFEGG FGSD
Sbjct: 39 LPNVSSQPLLSFSHSLRPFISKSKPMCASIQKRDGSQFVVKSQALDFSGTFFEGG-FGSD 97
Query: 83 DDPTSVPPGSVGTATAIEDKEEPQCPPGLRQYETMMVLRPDMSEDERLALTQNCLLLGVA 142
DDPTS P GS G +TA+EDK EPQCPPGLRQYETM VLRPDMSEDERL LTQ L VA
Sbjct: 98 DDPTS-PSGS-GVSTALEDKPEPQCPPGLRQYETMAVLRPDMSEDERLGLTQKYEELLVA 155
>gi|351720783|ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycine max]
gi|255628961|gb|ACU14825.1| unknown [Glycine max]
Length = 214
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/151 (55%), Positives = 99/151 (65%), Gaps = 11/151 (7%)
Query: 1 MASSSLTSALTSQSKSPFYPQQLSQ----LPSSPLFSFARSLKTFRTNAKSLLLHKKNSN 56
MASSSLTS S S S P S+ SSP+ +F+R+ KT ++ H K N
Sbjct: 1 MASSSLTSVPLSSS-SLNIPHSSSKASASFVSSPIGAFSRTPKTLFAESR-FHFHPKR-N 57
Query: 57 SVSLTVKAQTLDFSGSFFEGGGFGSDDDPTSVPPGSVGTATAIEDKEEPQCPPGLRQYET 116
+++AQTLDFS SFFEGG FGS+D P+S PG G TA+E+KEEPQCPPGLRQYET
Sbjct: 58 DYGFSIRAQTLDFSDSFFEGG-FGSEDVPSS--PGGPG-FTAVEEKEEPQCPPGLRQYET 113
Query: 117 MMVLRPDMSEDERLALTQNCLLLGVACMWRY 147
MMVLRPDMSEDERLALTQ + VA Y
Sbjct: 114 MMVLRPDMSEDERLALTQKYEEVLVAGGGMY 144
>gi|255555639|ref|XP_002518855.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223541842|gb|EEF43388.1| structural constituent of ribosome, putative [Ricinus communis]
Length = 205
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 85/133 (63%), Gaps = 18/133 (13%)
Query: 11 TSQSKSPFYPQQLSQLPSSPLFSFARSLKTFRTNAKSLLLHKKNSNSVSLTVKAQTLDFS 70
T + SP P+ S+ P P SFA ++K K + SLT+K+Q LDFS
Sbjct: 15 TVINSSPLCPKLFSKFPCFPSLSFAHTIK-------------KRHSVRSLTIKSQALDFS 61
Query: 71 GSFFEGGGFGSDDDPTSVPPGSVGTA-TAIEDKEEPQCPPGLRQYETMMVLRPDMSEDER 129
GSF+EG GFGS++DP P G+ TA+EDKE PQCPPGLRQYETM VLRPDMSEDER
Sbjct: 62 GSFYEGSGFGSEEDP----PTLTGSGMTAVEDKEPPQCPPGLRQYETMAVLRPDMSEDER 117
Query: 130 LALTQNCLLLGVA 142
LALTQ L VA
Sbjct: 118 LALTQKYEELLVA 130
>gi|351727673|ref|NP_001236145.1| uncharacterized protein LOC100305490 [Glycine max]
gi|255625673|gb|ACU13181.1| unknown [Glycine max]
Length = 214
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/115 (60%), Positives = 83/115 (72%), Gaps = 6/115 (5%)
Query: 33 SFARSLKTFRTNAKSLLLHKKNSNSVSLTVKAQTLDFSGSFFEGGGFGSDDDPTSVPPGS 92
+F+R+ KT +KS K+N + S ++AQTLDFS SFFEGG FGS+DDP+S PG
Sbjct: 36 AFSRTPKTLFAESKSHFYPKRNDHGFS--IRAQTLDFSDSFFEGG-FGSEDDPSS--PGG 90
Query: 93 VGTATAIEDKEEPQCPPGLRQYETMMVLRPDMSEDERLALTQNCLLLGVACMWRY 147
G T +E+KEEPQCPPGLRQYETMMVLRPDMSEDERLALTQ + VA Y
Sbjct: 91 PG-FTGVEEKEEPQCPPGLRQYETMMVLRPDMSEDERLALTQKYEEVLVAGGGMY 144
>gi|224053759|ref|XP_002297965.1| predicted protein [Populus trichocarpa]
gi|222845223|gb|EEE82770.1| predicted protein [Populus trichocarpa]
Length = 184
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/120 (60%), Positives = 88/120 (73%), Gaps = 6/120 (5%)
Query: 28 SSPLFSFARSLKTFRTNAKSLLLHKKNSNSVSLTVKAQTLDFSGSFFEGGGFGSDDDPTS 87
S PL SF+++LK F +K L+++ +SN + VKAQT+DF+GSF+EGG GSDD+P S
Sbjct: 1 SLPLLSFSQTLKPFPNTSK--LVYRAHSNPTT-AVKAQTVDFAGSFYEGG-IGSDDEPGS 56
Query: 88 VPPGSVGTATAIEDKEEPQCPPGLRQYETMMVLRPDMSEDERLALTQNCLLLGVACMWRY 147
P GS GT TA+E+KE P CPPGLRQYETM VLRPDMSEDERLALTQ L VA Y
Sbjct: 57 -PIGS-GTMTAVEEKETPPCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMY 114
>gi|225426247|ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic [Vitis
vinifera]
Length = 199
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/120 (59%), Positives = 82/120 (68%), Gaps = 11/120 (9%)
Query: 28 SSPLFSFARSLKTFRTNAKSLLLHKKNSNSVSLTVKAQTLDFSGSFFEGGGFGSDDDPTS 87
S P+ SF T + + + H + + L+++A TLDFSGSFFEGG FGSDDDP S
Sbjct: 21 SPPITSF-----TVFSGKQRFIYHPRRAPG--LSIRALTLDFSGSFFEGG-FGSDDDPNS 72
Query: 88 VPPGSVGTATAIEDKEEPQCPPGLRQYETMMVLRPDMSEDERLALTQNCLLLGVACMWRY 147
PPG G A A+EDK+EPQCPPGLRQYETM VLRPDMSEDERLALTQ L VA Y
Sbjct: 73 -PPGP-GIA-AVEDKDEPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMY 129
>gi|388511881|gb|AFK44002.1| unknown [Lotus japonicus]
Length = 209
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/143 (58%), Positives = 93/143 (65%), Gaps = 10/143 (6%)
Query: 1 MASSSLTSA-LTSQSKSPFYPQQLSQLPSSPLFSFARSLKTFRTNAKSLLLHKKNSNSVS 59
MAS+SL S LTS S + P S PS+ S R+ K +KS KKN +SV
Sbjct: 1 MASTSLNSIPLTSSSLN--IPHCYSIPPSTFFSSPIRAFKPLFAESKSHCYQKKN-DSV- 56
Query: 60 LTVKAQTLDFSGSFFEGGGFGSDDDPTSVPPGSVGTATAIEDKEEPQCPPGLRQYETMMV 119
L+VKAQTLDF+ SFFEGG GS+DD S G TA E+KEEPQCPPGLRQYETM V
Sbjct: 57 LSVKAQTLDFTDSFFEGG-LGSEDDLNSSGTG----LTATEEKEEPQCPPGLRQYETMAV 111
Query: 120 LRPDMSEDERLALTQNCLLLGVA 142
LRPDMSEDERLALTQ L VA
Sbjct: 112 LRPDMSEDERLALTQKYEELLVA 134
>gi|449518755|ref|XP_004166401.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Cucumis sativus]
Length = 222
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 86/123 (69%), Gaps = 7/123 (5%)
Query: 58 VSLTVKAQTLDFSGSFFEGGGFGSDDDPTSVPPGSVGTATAIEDKEEPQCPPGLRQYETM 117
+ L+VKAQTL+FSGSFFEGG GS D+P + PPG+ G ATA+E+KEEPQCPPGLR+YE+M
Sbjct: 54 LGLSVKAQTLEFSGSFFEGG-LGSQDEPPA-PPGT-GFATALEEKEEPQCPPGLRKYESM 110
Query: 118 MVLRPDMSEDERLALTQN---CLLLGVACMWRYSIEGLFHWPTASGRETKLGSPTLTWMV 174
+VLRPDMSEDERLA T+ L+ G A +GL + ++ K G T T++
Sbjct: 111 VVLRPDMSEDERLAFTEKYEELLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGE-TNTYLD 169
Query: 175 SIS 177
I+
Sbjct: 170 GIN 172
>gi|449452224|ref|XP_004143860.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Cucumis sativus]
Length = 222
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 86/123 (69%), Gaps = 7/123 (5%)
Query: 58 VSLTVKAQTLDFSGSFFEGGGFGSDDDPTSVPPGSVGTATAIEDKEEPQCPPGLRQYETM 117
+ L+VKAQTL+FSGSFFEGG GS D+P + PPG+ G ATA+E+KEEPQCPPGLR+YE+M
Sbjct: 54 LGLSVKAQTLEFSGSFFEGG-LGSQDEPPA-PPGT-GFATALEEKEEPQCPPGLRKYESM 110
Query: 118 MVLRPDMSEDERLALTQN---CLLLGVACMWRYSIEGLFHWPTASGRETKLGSPTLTWMV 174
+VLRPDMSEDERLA T+ L+ G A +GL + ++ K G T T++
Sbjct: 111 VVLRPDMSEDERLAFTEKYEELLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGE-TNTYLD 169
Query: 175 SIS 177
I+
Sbjct: 170 GIN 172
>gi|75276132|sp|P82403.2|RR6_SPIOL RecName: Full=30S ribosomal protein S6 alpha, chloroplastic;
Contains: RecName: Full=30S ribosomal protein S6 beta,
chloroplastic; Contains: RecName: Full=30S ribosomal
protein S6 gamma, chloroplastic; Contains: RecName:
Full=30S ribosomal protein S6 delta, chloroplastic;
Contains: RecName: Full=30S ribosomal protein S6
epsilon, chloroplastic; Flags: Precursor
gi|188036207|pdb|3BBN|F Chain F, Homology Model For The Spinach Chloroplast 30s Subunit
Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome.
gi|7582401|gb|AAF64311.1|AF250383_1 plastid ribosomal protein S6 precursor, partial [Spinacia oleracea]
Length = 168
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 62/86 (72%), Gaps = 6/86 (6%)
Query: 62 VKAQTLDFSGSFFEGGGFGSDDDPTSVPPGSVGTATAIEDKEEPQCPPGLRQYETMMVLR 121
VKA LDFSGSFFEGG G D+DP S PP + A+E+K EPQCPPGLRQYETM VLR
Sbjct: 17 VKAIALDFSGSFFEGGFGGLDEDPPSTPPAGL----AVEEKPEPQCPPGLRQYETMAVLR 72
Query: 122 PDMSEDERLALTQNC--LLLGVACMW 145
PDM+EDERL LTQ LL+ M+
Sbjct: 73 PDMTEDERLTLTQKYEELLVAGGAMY 98
>gi|116782057|gb|ABK22352.1| unknown [Picea sitchensis]
gi|116793661|gb|ABK26832.1| unknown [Picea sitchensis]
Length = 206
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 8/69 (11%)
Query: 66 TLDFSGSFFEGGGFGSDDDPTSVPPGSVGTATAIEDKEEPQCPPGLRQYETMMVLRPDMS 125
+LDF G+FFEGGG ++ S P +G +++ +CPPGLR YETM VLRPD+S
Sbjct: 63 SLDFKGAFFEGGG--DNNGLGSGPLEELG------EEKSRKCPPGLRDYETMAVLRPDIS 114
Query: 126 EDERLALTQ 134
E+ERLALTQ
Sbjct: 115 EEERLALTQ 123
>gi|326531910|dbj|BAK01331.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 205
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 95 TATAIEDKEEPQCPPGLRQYETMMVLRPDMSEDERLALTQNC--LLLGVACMW 145
A A+E++E P CPPGLRQYETM+VLRPDMSE+ERLAL Q LL+ M+
Sbjct: 81 AAMALEEREMPPCPPGLRQYETMVVLRPDMSEEERLALIQRYEELLVAGGAMY 133
>gi|116780928|gb|ABK21884.1| unknown [Picea sitchensis]
Length = 206
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 47/69 (68%), Gaps = 8/69 (11%)
Query: 66 TLDFSGSFFEGGGFGSDDDPTSVPPGSVGTATAIEDKEEPQCPPGLRQYETMMVLRPDMS 125
+LDF G FFEGGG ++ S P +G +++ +CPPGLR YETM VLRPD+S
Sbjct: 63 SLDFKGVFFEGGG--DNNGLGSGPLEELG------EEKSRKCPPGLRDYETMAVLRPDIS 114
Query: 126 EDERLALTQ 134
E+ERLALTQ
Sbjct: 115 EEERLALTQ 123
>gi|326524554|dbj|BAK00660.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 205
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 95 TATAIEDKEEPQCPPGLRQYETMMVLRPDMSEDERLALTQNC--LLLGVACMW 145
A A+E++E P CPPGLRQYETM+VLRPDMSE+ERLAL Q LL+ M+
Sbjct: 81 AAMALEEREMPPCPPGLRQYETMVVLRPDMSEEERLALIQRYEELLVAGGAMY 133
>gi|357121647|ref|XP_003562529.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Brachypodium distachyon]
Length = 210
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 40/52 (76%), Gaps = 2/52 (3%)
Query: 96 ATAIEDKEEPQCPPGLRQYETMMVLRPDMSEDERLALTQNC--LLLGVACMW 145
A A+E++E P CPPGLRQYETM+VLRPDMSE+ERLAL Q LL+ M+
Sbjct: 87 ALALEEREMPPCPPGLRQYETMVVLRPDMSEEERLALIQRYEELLVSGGAMY 138
>gi|125588601|gb|EAZ29265.1| hypothetical protein OsJ_13329 [Oryza sativa Japonica Group]
Length = 215
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Query: 102 KEEPQCPPGLRQYETMMVLRPDMSEDERLALTQNC--LLLGVACMW 145
+E P CPPGLRQYETM+VLRPDMSE+ERLAL Q LL+ M+
Sbjct: 98 REMPPCPPGLRQYETMVVLRPDMSEEERLALIQRYEELLVAGGAMY 143
>gi|125546402|gb|EAY92541.1| hypothetical protein OsI_14280 [Oryza sativa Indica Group]
Length = 215
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Query: 102 KEEPQCPPGLRQYETMMVLRPDMSEDERLALTQNC--LLLGVACMW 145
+E P CPPGLRQYETM+VLRPDMSE+ERLAL Q LL+ M+
Sbjct: 98 REMPPCPPGLRQYETMVVLRPDMSEEERLALIQRYEELLVAGGAMY 143
>gi|115456525|ref|NP_001051863.1| Os03g0843400 [Oryza sativa Japonica Group]
gi|41469637|gb|AAS07360.1| putative plastid ribosomal protein S6 precursor [Oryza sativa
Japonica Group]
gi|108712038|gb|ABF99833.1| ribosomal protein S6 family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113550334|dbj|BAF13777.1| Os03g0843400 [Oryza sativa Japonica Group]
gi|215692368|dbj|BAG87788.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704476|dbj|BAG93910.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 219
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Query: 102 KEEPQCPPGLRQYETMMVLRPDMSEDERLALTQNC--LLLGVACMW 145
+E P CPPGLRQYETM+VLRPDMSE+ERLAL Q LL+ M+
Sbjct: 102 REMPPCPPGLRQYETMVVLRPDMSEEERLALIQRYEELLVAGGAMY 147
>gi|242037445|ref|XP_002466117.1| hypothetical protein SORBIDRAFT_01g001650 [Sorghum bicolor]
gi|241919971|gb|EER93115.1| hypothetical protein SORBIDRAFT_01g001650 [Sorghum bicolor]
Length = 215
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 102 KEEPQCPPGLRQYETMMVLRPDMSEDERLALTQNC--LLLGVACMW 145
+E P CPPGLRQYETM+VLRPDMSE+ERLA Q LL+ M+
Sbjct: 98 REMPPCPPGLRQYETMVVLRPDMSEEERLAFIQRYEELLVAGGAMY 143
>gi|293331817|ref|NP_001168663.1| uncharacterized protein LOC100382451 [Zea mays]
gi|223950019|gb|ACN29093.1| unknown [Zea mays]
gi|414873867|tpg|DAA52424.1| TPA: hypothetical protein ZEAMMB73_242752 [Zea mays]
Length = 222
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 102 KEEPQCPPGLRQYETMMVLRPDMSEDERLALTQNC--LLLGVACMW 145
+E P CPPGLRQYETM+VLRPDMSE+ERLA Q LL+ M+
Sbjct: 105 REMPPCPPGLRQYETMVVLRPDMSEEERLAFIQRYEELLVAGGAMY 150
>gi|168062700|ref|XP_001783316.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665168|gb|EDQ51861.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 29/33 (87%)
Query: 102 KEEPQCPPGLRQYETMMVLRPDMSEDERLALTQ 134
+E Q PPGL++YETM VLRPD++ED+RLALTQ
Sbjct: 6 REIRQYPPGLQRYETMTVLRPDITEDQRLALTQ 38
>gi|168008110|ref|XP_001756750.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691988|gb|EDQ78347.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 29/33 (87%)
Query: 102 KEEPQCPPGLRQYETMMVLRPDMSEDERLALTQ 134
+E Q PPGL++YETM VLRPD++E++RLALTQ
Sbjct: 6 REIRQYPPGLQRYETMTVLRPDITEEQRLALTQ 38
>gi|302786646|ref|XP_002975094.1| hypothetical protein SELMODRAFT_58368 [Selaginella moellendorffii]
gi|302814601|ref|XP_002988984.1| hypothetical protein SELMODRAFT_48625 [Selaginella moellendorffii]
gi|300143321|gb|EFJ10013.1| hypothetical protein SELMODRAFT_48625 [Selaginella moellendorffii]
gi|300157253|gb|EFJ23879.1| hypothetical protein SELMODRAFT_58368 [Selaginella moellendorffii]
Length = 112
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 23/28 (82%)
Query: 108 PPGLRQYETMMVLRPDMSEDERLALTQN 135
P G +YETM VLRPD++E++RLAL+Q
Sbjct: 7 PKGFTRYETMAVLRPDITEEQRLALSQR 34
>gi|297742384|emb|CBI34533.3| unnamed protein product [Vitis vinifera]
Length = 101
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/26 (76%), Positives = 20/26 (76%)
Query: 117 MMVLRPDMSEDERLALTQNCLLLGVA 142
M VLRPDMSEDERLALTQ L VA
Sbjct: 1 MAVLRPDMSEDERLALTQKYEELLVA 26
>gi|384250774|gb|EIE24253.1| hypothetical protein COCSUDRAFT_53277 [Coccomyxa subellipsoidea
C-169]
Length = 177
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/22 (68%), Positives = 18/22 (81%)
Query: 108 PPGLRQYETMMVLRPDMSEDER 129
P G YETM+VLRPD+SE+ER
Sbjct: 77 PEGYVWYETMLVLRPDLSEEER 98
>gi|168334062|ref|ZP_02692278.1| hypothetical protein Epulo_03964 [Epulopiscium sp. 'N.t. morphotype
B']
Length = 200
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 69 FSGSFFEGGGFGSDDDPTSVPPGSVGTATAIEDKEEPQCPPGLRQYETMMVLRPDMSEDE 128
FS +FF FG D D +P + TA +E ++E P +++ + +VL ++ E
Sbjct: 16 FSATFFSVNKFGYDKDTVPIPNLNAETAAPVEIEQEIVMGPPVKEIKDPVVLPT--TKVE 73
Query: 129 RLALTQNCLLLGVACMWRYSIEGL 152
++A+ QN ++ + YS+ GL
Sbjct: 74 QIAVDQNGEVVSTNELNAYSVMGL 97
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.126 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,882,913,255
Number of Sequences: 23463169
Number of extensions: 116457128
Number of successful extensions: 232474
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 232416
Number of HSP's gapped (non-prelim): 36
length of query: 187
length of database: 8,064,228,071
effective HSP length: 134
effective length of query: 53
effective length of database: 9,215,130,721
effective search space: 488401928213
effective search space used: 488401928213
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 72 (32.3 bits)