BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 029833
         (187 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9D099|ACER3_MOUSE Alkaline ceramidase 3 OS=Mus musculus GN=Acer3 PE=2 SV=1
          Length = 267

 Score = 56.6 bits (135), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 82/200 (41%), Gaps = 22/200 (11%)

Query: 2   ILAIGSMLYHATLQHMQQQGDETPMVWEMLLYIYILY-------SPDWHYKSTMPTFLFL 54
           ++ +GS  +H TL++  Q  DE PM++   +++Y ++       S ++H   T    LFL
Sbjct: 72  VVGMGSWCFHMTLKYEMQLLDELPMIYSCCIFVYCMFECFKTKSSINYHLLFT----LFL 127

Query: 55  YGAAFAVAHALFRFGIGFKVHYAVLCLLCIPRMYKYYIHTTDVPAKR-LAKLYLATITVG 113
           Y       +   +  I  +V Y +L    + R    YI T   P  R L    L    +G
Sbjct: 128 YSLTVTTIYLKVKEPIFHQVMYGMLVFTLVLR--SIYIVTWVYPWLRGLGYTSLTVFLLG 185

Query: 114 SLCWLCDRLFCEKIS--------LWYFNPQGHALWHTFMGFNSYFANTFLMFCRAQQRGW 165
            L W  D +FC+ +         +     Q HA WH   G  SY    F ++ R     +
Sbjct: 186 FLLWNIDNIFCDSLRNFRKRVPPVLGVTTQFHAWWHILTGLGSYLHILFSLYTRTLYLRY 245

Query: 166 NPKVVHAMGWLPYVKIDKPK 185
            PKV    G  P V  +  +
Sbjct: 246 RPKVKFLFGIWPAVMFEPQR 265


>sp|Q9VIP7|ACASE_DROME Alkaline ceramidase OS=Drosophila melanogaster GN=bwa PE=2 SV=2
          Length = 283

 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 15/158 (9%)

Query: 1   MILAIGSMLYHATLQHMQQQGDETPMVWEMLLYIYILYSPDWHY----KSTMPTF--LFL 54
           +++ + SM +HATL  + Q  DE  ++W + +  + L+ P  +Y    K+   TF  L L
Sbjct: 82  IVVGLSSMYFHATLSLIGQLLDELAILW-VFMAAFSLFYPKRYYPKFVKNDRKTFSWLML 140

Query: 55  YGAAFAVAHALFRFGIGFKVHYAVLCLLCIPRMYKYYIHTTDVPAKRLAKLYLATIT--- 111
             A  A   + ++      V+  VL  + +P M   Y     V  +R+ +L + + T   
Sbjct: 141 LSAIAATGLSWWK----PIVNAFVLMFMSVPTMVMLYTELQRVSDQRVYRLGIRSTTVWA 196

Query: 112 VGSLCWLCDRLFCEKISLWYFNPQGHALWHTFMGFNSY 149
           V   CW+ DR+FCE  S   F P  H  WH F+   +Y
Sbjct: 197 VAVFCWINDRIFCEAWSSINF-PYLHGFWHIFIFIAAY 233


>sp|Q6TMJ1|DCD3A_DICDI Putative alkaline ceramidase dcd3A OS=Dictyostelium discoideum
           GN=dcd3A PE=2 SV=1
          Length = 288

 Score = 55.1 bits (131), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 80/200 (40%), Gaps = 24/200 (12%)

Query: 1   MILAIGSMLYHATLQHMQQQGDETPMVWEMLLYIYILYSPDWHYKSTMPTFLFLYGAAFA 60
           +++ +GS  YHATL +  Q  DE PM++  L+ +YI+ +              L  +   
Sbjct: 86  IVVGVGSAFYHATLLYQNQLFDELPMIYTALIMLYIMVTVGEEKTKKGFKGGVLGNSLLR 145

Query: 61  VAHALFRFGIGFKVHYAVLCLLCIPRMYK---------------YYIHTT------DVPA 99
                     G  V   +L +   P++ +               Y I+          P 
Sbjct: 146 HLLPYLLIAYGLFVTITILVIQDQPKILQVSFGALVFYVVFHSIYLINKKKPDGMPSNPD 205

Query: 100 KRLAKLYLATITVGSLCWLCDRLFCEKISLWYFNPQGHALWHTFMGFNSYFANTFLMFCR 159
             L K    ++ VG  CW+ +R FC+    + F  Q HA WH F G ++Y    FL+   
Sbjct: 206 SYLYKYAFVSMLVGFTCWVVERYFCKNGKTFGF--QLHAFWHFFTGMSTYVWTQFLICKL 263

Query: 160 AQQRGWNPKVVHAMGWLPYV 179
            + + +   + H +G LP +
Sbjct: 264 LEAKHYCVGIKHTLG-LPRI 282


>sp|Q9NUN7|ACER3_HUMAN Alkaline ceramidase 3 OS=Homo sapiens GN=ACER3 PE=1 SV=3
          Length = 267

 Score = 53.5 bits (127), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 81/198 (40%), Gaps = 24/198 (12%)

Query: 2   ILAIGSMLYHATLQHMQQQGDETPMVWEMLLYIYILY-------SPDWHYKSTMPTF-LF 53
           ++ +GS  +H TL++  Q  DE PM++   +++Y ++       S ++H   T+  F L 
Sbjct: 72  VVGMGSWCFHMTLKYEMQLLDELPMIYSCCIFVYCMFECFKIKNSVNYHLLFTLVLFSLI 131

Query: 54  LYGAAFAVAHALFRFGIGFKVHYAVLCLLCIPRMYKYYIHTTDVPAKR-LAKLYLATITV 112
           +      V   +F      +V Y +L    + R    YI T   P  R L    L    +
Sbjct: 132 VTTVYLKVKEPIFH-----QVMYGMLVFTLVLR--SIYIVTWVYPWLRGLGYTSLGIFLL 184

Query: 113 GSLCWLCDRLFCEKIS--------LWYFNPQGHALWHTFMGFNSYFANTFLMFCRAQQRG 164
           G L W  D +FCE +         +     Q HA WH   G  SY    F ++ R     
Sbjct: 185 GFLFWNIDNIFCESLRNFRKKVPPIIGITTQFHAWWHILTGLGSYLHILFSLYTRTLYLR 244

Query: 165 WNPKVVHAMGWLPYVKID 182
           + PKV    G  P +  +
Sbjct: 245 YRPKVKFLFGIWPVILFE 262


>sp|Q55DQ0|DCD3B_DICDI Putative alkaline ceramidase dcd3B OS=Dictyostelium discoideum
           GN=dcd3B PE=3 SV=1
          Length = 285

 Score = 46.2 bits (108), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 77/187 (41%), Gaps = 22/187 (11%)

Query: 2   ILAIGSMLYHATLQHMQQQGDETPMVWEMLLYIYILYSPD--------WHYK---STMPT 50
           I+ +GS  YHATL +  Q  DE PM+    +++Y + + D          YK     +P 
Sbjct: 86  IVGVGSAFYHATLLYKNQLFDEFPMMLTASMFVYCILTIDPVDEKNDTATYKLMRRFLPY 145

Query: 51  FLFLYGAAFAVAHALFRFG-IGFKVHYAVLCLLCIPRMYKYYIHTTDVPA-----KRLAK 104
            L LY    A+   + R   I  +  + +L    +   Y Y       P      K+   
Sbjct: 146 ILSLYVIVVAITITIIRDSPIILQSSFGLLIFSNVFLSYMYTSRCLKTPVMESNPKKFLY 205

Query: 105 LYLATITVGSLCWLCDRLFCEKISLWYFNP--QGHALWHTFMGFNSYFANTFLMFCRAQQ 162
           L +A++ +  + WL +R  C      Y  P  Q HA+WH   G   ++   F +    ++
Sbjct: 206 LCIASMGIAYISWLTERKLCNN---GYVIPGVQLHAVWHALTGLAGFYYIQFFITSCLEK 262

Query: 163 RGWNPKV 169
            G+  K+
Sbjct: 263 HGYKTKL 269


>sp|Q568I2|ACER1_DANRE Alkaline ceramidase 1 OS=Danio rerio GN=acer1 PE=2 SV=1
          Length = 266

 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 14/169 (8%)

Query: 3   LAIGSMLYHATLQHMQQQGDETPMVWEMLLYIYILYSPDWHYKSTMP--TFLFLYGAAFA 60
           + I SM +H TL  M Q  DE  ++W +L   Y L+ P  H+ S +   T          
Sbjct: 69  VGIFSMYFHMTLSFMGQMLDELSILW-VLAIGYSLWFPRKHFPSFVKDRTSFARLVLTIT 127

Query: 61  VAHALFRFGIGFKVHYAVLCLLCIPRMYKYYIHTTDVPAKRLAKLYLATITVGSL---CW 117
           +   L  F       YA+ C   I  +Y  ++       +R+ +L  A+I +  L   CW
Sbjct: 128 IISTLSSFVKPTANAYALNC-FAIHILYSLFVELKSCTDERVLRLAWASIGLWVLAISCW 186

Query: 118 LCDRLFC---EKISLWYFNPQGHALWHTFMGFNSYFANTFLMFCRAQQR 163
           + DR  C   +K+   Y     H +WH  +   + +A+T + +  A Q 
Sbjct: 187 ISDRFGCSFWQKLDFCYL----HGIWHILIVMATAYASTLIAYLDASQE 231


>sp|Q5QJU3|ACER2_HUMAN Alkaline ceramidase 2 OS=Homo sapiens GN=ACER2 PE=1 SV=2
          Length = 275

 Score = 44.3 bits (103), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 43/174 (24%)

Query: 1   MILAIGSMLYHATLQHMQQQGDETPMVWEMLLYIYILYSPDWHYKSTMPTFLFLYGAAFA 60
           +++ IGS+ +HATL  + Q  DE  ++W ++  + +     W  +  +P           
Sbjct: 72  VVVGIGSVYFHATLSFLGQMLDELAVLWVLMCALAM-----WFPRRYLPK---------- 116

Query: 61  VAHALFRFGIG-FKVHYAVL-----CLLCI-PRMYKYYIHTTDVPAK------------- 100
               +FR   G FKV  +VL     CL  + P +    + T  VP               
Sbjct: 117 ----IFRNDRGRFKVVVSVLSAVTTCLAFVKPAINNISLMTLGVPCTALLIAELKRCDNM 172

Query: 101 RLAKLYLATI---TVGSLCWLCDRLFCEKISLWYFNPQGHALWHTFMGFNSYFA 151
           R+ KL L +    T+   CW+ DR FCE +S + F P  H +WH  +   +Y  
Sbjct: 173 RVFKLGLFSGLWWTLALFCWISDRAFCELLSSFNF-PYLHCMWHILICLAAYLG 225


>sp|Q8VD53|ACER2_MOUSE Alkaline ceramidase 2 OS=Mus musculus GN=Acer2 PE=2 SV=1
          Length = 275

 Score = 44.3 bits (103), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 66/161 (40%), Gaps = 17/161 (10%)

Query: 1   MILAIGSMLYHATLQHMQQQGDETPMVWEMLLYIYILYSPDWHYKSTMPTF--------- 51
           +++ IGS+ +HATL  + Q  DE  ++W ++  + +     W  +  +P           
Sbjct: 72  VVVGIGSVYFHATLSFLGQMLDELAILWVLMCALAM-----WFPRRYLPKIFRNDRGRFK 126

Query: 52  -LFLYGAAFAVAHALFRFGIGFKVHYAVLCLLCIPRMYKYYIHTTDVPAKRLAKLYLATI 110
            +    +A     A  +  I   +   +L L C   +        +V   +L        
Sbjct: 127 AVVCVLSAITTCLAFIKPAIN-NISLMILGLPCTALLVAELKRCDNVRVFKLGLFSGLWW 185

Query: 111 TVGSLCWLCDRLFCEKISLWYFNPQGHALWHTFMGFNSYFA 151
           T+   CW+ D+ FCE +S ++F P  H +WH  +   SY  
Sbjct: 186 TLALFCWISDQAFCELLSSFHF-PYLHCVWHILICLASYLG 225


>sp|Q02896|YDC1_YEAST Alkaline ceramidase YDC1 OS=Saccharomyces cerevisiae (strain ATCC
           204508 / S288c) GN=YDC1 PE=1 SV=1
          Length = 317

 Score = 37.4 bits (85), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 80/201 (39%), Gaps = 40/201 (19%)

Query: 2   ILAIGSMLYHATLQHMQQQGDETPMVWEMLLYIYILYSP-------------DWHYKSTM 48
           ++ IGS L+H TLQ+  Q  DE PM++  ++  + +++              +  ++  M
Sbjct: 77  LVGIGSWLFHMTLQYRYQLLDELPMLYATIIPSWSIFAETQEILIKDEKKRKESSFRIQM 136

Query: 49  PTFLFLYGAAFAVA--HALFRFGIGFKVHYAVLCLLCIP-RMYKYYIHTTDVPAKRLAKL 105
                + G    +   + + +    F+V Y +L LL +    +  Y H  D  AK+   L
Sbjct: 137 VISFIMCGIVTILTWIYVVVQKPAIFQVLYGILTLLVVVLSGWLTYYHVHDSFAKK--NL 194

Query: 106 YLATI------TVGSLCWLCDRLFCEKISLWYFN-------PQG-----HALWHTFMGFN 147
           ++  +       +G +CW  D   C   S W +        P G     HA WH   G  
Sbjct: 195 FITMVMGMIPFVIGFICWQLDIHLC---SFWIYIRRTYLALPLGVLLELHAWWHLLTGTG 251

Query: 148 SYFANTFLMFCRAQQRGWNPK 168
            Y    +L + R    G NP 
Sbjct: 252 VYIFVVYLQYLRILTHG-NPN 271


>sp|O45145|ACASE_CAEEL Alkaline ceramidase OS=Caenorhabditis elegans GN=W02F12.2 PE=3 SV=2
          Length = 272

 Score = 35.0 bits (79), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 73/184 (39%), Gaps = 16/184 (8%)

Query: 4   AIGSMLYHATLQHMQQQGDETPMVWEMLLYIYILYSP--DWHYKSTMPTFLFLYGAAFAV 61
            + S  YHATL    Q  DE  +VW + +++ ++Y P   W +       L L      +
Sbjct: 76  GLASTYYHATLNLFGQLVDELSLVWIITVFL-VVYIPVMKW-FPEKFSKRLTLVRWVVLI 133

Query: 62  AHALFRFGIGF---KVHYAVLCLLCIPR--MYKYYIHTTDVPA-KRLAKLYLATITVGSL 115
             AL   G+ F    ++   L L  IP   +  Y    + +P  +      LA   V   
Sbjct: 134 VTALVS-GLCFLEPNLNAIALMLFSIPAAVVINYEGKQSGIPDIESFPSRILALWGVAFS 192

Query: 116 CWLCDRLFCEKISLWYFNPQGHALWHTFMGFNSYFANTFLMFC--RAQQRGWNPKVVHAM 173
            W  DRL C+   L+   P  HAL+H   G   Y    F+MF     + R    K   A+
Sbjct: 193 FWFADRLLCD-FWLYLGTPYLHALFHLLAGLAGY--TIFIMFSMIDIESRTKTHKYTAAV 249

Query: 174 GWLP 177
            + P
Sbjct: 250 RYFP 253


>sp|Q60WT2|ACASE_CAEBR Alkaline ceramidase OS=Caenorhabditis briggsae GN=CBG18997 PE=3
           SV=2
          Length = 272

 Score = 35.0 bits (79), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 16/184 (8%)

Query: 4   AIGSMLYHATLQHMQQQGDETPMVWEMLLYIYILYSP--DW---HYKSTMPTFLFLYGAA 58
            + S  YHATL    Q  DE  +VW + +++ ++Y P   W    +   +    ++    
Sbjct: 76  GLASTYYHATLNLFGQLVDELSLVWIITVFL-VVYIPVMKWFPERFSKRLTVVRWVVLIV 134

Query: 59  FAVAHALFRFGIGFKVHYAVLCLLCIPR--MYKYYIHTTDVPA-KRLAKLYLATITVGSL 115
            AV  AL    +   ++   L L  IP   + +Y    + +P  +      LA   V   
Sbjct: 135 TAVVSAL--CFLEPNLNAIALMLFSIPAAVVIRYEGKQSGIPDIENFPSRILALWGVAFS 192

Query: 116 CWLCDRLFCEKISLWYFNPQGHALWHTFMGFNSYFANTFLMFC--RAQQRGWNPKVVHAM 173
            W  DRL C+   L+   P  HAL+H   G   Y    F+MF     + R    +   A+
Sbjct: 193 FWFADRLLCD-FWLYLGTPYLHALFHLLAGLAGY--TIFIMFSMIDIESRSKTHRYTAAV 249

Query: 174 GWLP 177
            + P
Sbjct: 250 RYFP 253


>sp|Q8TDN7|ACER1_HUMAN Alkaline ceramidase 1 OS=Homo sapiens GN=ACER1 PE=2 SV=1
          Length = 264

 Score = 33.5 bits (75), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 31/162 (19%)

Query: 1   MILAIGSMLYHATLQHMQQQGDETPMVWEMLLYIYILYSPDWHYKSTMPTFLFLYGAAF- 59
           MI+ + SM +H TL  + Q  DE  ++W +L   Y ++ P  ++    P+FL    + F 
Sbjct: 67  MIIGLFSMYFHMTLSFLGQLLDEIAILW-LLGSGYSIWMPRCYF----PSFLGGNRSQFI 121

Query: 60  ------AVAHALFRFGIGFKVHYA-------VLCLLCIPRMYKYYIHTTDVPAKRLAKLY 106
                  V   L  F       YA       +L ++C     + Y  T++   + L ++ 
Sbjct: 122 RLVFITTVVSTLLSFLRPTVNAYALNSIALHILYIVC-----QEYRKTSNKELRHLIEVS 176

Query: 107 LATITVGSLCWLCDRLFC---EKISLWYFNPQGHALWHTFMG 145
           +    V    W+ DRL C   ++I  +Y     H++WH  + 
Sbjct: 177 VVLWAVALTSWISDRLLCSFWQRIHFFYL----HSIWHVLIS 214


>sp|P38298|YPC1_YEAST Alkaline ceramidase YPC1 OS=Saccharomyces cerevisiae (strain ATCC
           204508 / S288c) GN=YPC1 PE=1 SV=1
          Length = 316

 Score = 33.5 bits (75), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 71/183 (38%), Gaps = 40/183 (21%)

Query: 2   ILAIGSMLYHATLQHMQQQGDETPMVWEMLLYIY--------ILYSPDWHYKSTMPTFLF 53
           ++ +GS L+H TL++  Q  DE PM++ M +  +         L + D H K  +   +F
Sbjct: 78  LVGVGSWLFHMTLKYRFQLLDELPMIYAMCIPTWSLVCEAKEALLNGDNHKKVPLFEQIF 137

Query: 54  ---LYGAAFAVAHALFRF-------GIGFKVHYAVLCLLCIPRMYKYYIHTTDVPAKRLA 103
              + G A   A  L+          I F V   V+        Y+ Y+H  D  AKR  
Sbjct: 138 IGVIIGLAVTTASILYVIYKNVDIHQILFGVQIVVVAATAGSLTYR-YVH--DPLAKRNL 194

Query: 104 KLYLATITV----GSLCWLCDRLFCEKISLWYFN-------PQG-----HALWHTFMGFN 147
           K  +A   +    G + WL D  +C   S W          P G     H  WH   G  
Sbjct: 195 KASMALGAILFLSGYISWLLDIHYC---SFWVHVRRSILALPLGVLLEPHGWWHILTGMG 251

Query: 148 SYF 150
            YF
Sbjct: 252 IYF 254


>sp|A3MXT8|AUBA_PYRCJ RNA-binding protein AU-1 OS=Pyrobaculum calidifontis (strain JCM
           11548 / VA1) GN=aubA PE=3 SV=1
          Length = 448

 Score = 33.1 bits (74), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 18/39 (46%)

Query: 69  GIGFKVHYAVLCLLCIPRMYKYYIHTTDVPAKRLAKLYL 107
           GIG K+      L C+PR   Y +HT   P  R    Y+
Sbjct: 335 GIGVKIERGFYALTCVPRRGNYVVHTYYTPEGRAVGTYI 373


>sp|Q54PA5|FSLK_DICDI Frizzled and smoothened-like protein K OS=Dictyostelium discoideum
           GN=fslK PE=2 SV=1
          Length = 580

 Score = 30.4 bits (67), Expect = 6.3,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 2/88 (2%)

Query: 65  LFRFGIGFKVHYAVLCLLCIPRMYKYYIHTTDVPAKRLAKLYLATITVGSLCWLCDRLFC 124
           ++ FG  F +H ++         +K  I +TD    R+     ++I +   C     ++C
Sbjct: 446 VYLFGYNFYIHNSLNGFYGSSEEFKNCIISTDGKDCRIQGPPYSSILMFVFCLRIYGVYC 505

Query: 125 EKISLWYFNPQGHALWHTFMGFNSYFAN 152
             I+L+ F+P+  ++W   + FN+  AN
Sbjct: 506 --IALYGFSPKTRSIWSNSIVFNNSMAN 531


>sp|Q8R4X1|ACER1_MOUSE Alkaline ceramidase 1 OS=Mus musculus GN=Acer1 PE=1 SV=1
          Length = 273

 Score = 30.4 bits (67), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 31/153 (20%), Positives = 59/153 (38%), Gaps = 13/153 (8%)

Query: 1   MILAIGSMLYHATLQHMQQQGDETPMVWEMLLYIYILYSPDWHYKSTMPTFLFLYGAAFA 60
           M++ + SM +H TL  + Q  DE  ++W +L   Y ++ P  ++   +    F +     
Sbjct: 76  MLIGLFSMYFHMTLSFLGQLLDEISILW-LLASGYSVWLPRCYFPKFVKGNRFYFSCLVT 134

Query: 61  VAHALFRFGIGFKVHYAVLCLLCIPRMYKYYIHTT-----DVPAKRLAKLYLATITVGSL 115
           +   +  F    K       L  I     Y + T      D   + L  + +        
Sbjct: 135 ITTIISTFLTFVKPTVNAYALNSIAIHILYIVRTEYKKIRDDDLRHLIAVSVVLWAAALT 194

Query: 116 CWLCDRLFC---EKISLWYFNPQGHALWHTFMG 145
            W+ DR+ C   ++I  +Y     H++WH  + 
Sbjct: 195 SWISDRVLCSFWQRIHFYYL----HSIWHVLIS 223


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.332    0.142    0.500 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,444,312
Number of Sequences: 539616
Number of extensions: 2802297
Number of successful extensions: 6298
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 6276
Number of HSP's gapped (non-prelim): 20
length of query: 187
length of database: 191,569,459
effective HSP length: 111
effective length of query: 76
effective length of database: 131,672,083
effective search space: 10007078308
effective search space used: 10007078308
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 58 (26.9 bits)