BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>029834
MINESARLARAFCDRRLPVMAFLDTHHPNKPEDPYPTHCIAGTHESNLVPALQWIEKEPN
VTIRRKDCFDGYFGSIEDDGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNR
GFLRPLEEVVVYSAACATFDIPTHVATHTKGALAHPQEFMHHVGLYMAKERGAKIANQLS
FSEQTKA

High Scoring Gene Products

Symbol, full name Information P value
NIC1
AT2G22570 		protein from Arabidopsis thaliana 4.0e-67

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029834
        (187 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2041298 - symbol:NIC1 "nicotinamidase 1" speci...   682  4.0e-67   1


>TAIR|locus:2041298 [details] [associations]
            symbol:NIC1 "nicotinamidase 1" species:3702 "Arabidopsis
            thaliana" [GO:0003824 "catalytic activity" evidence=IEA;ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
            evidence=ISM] [GO:0008152 "metabolic process" evidence=IEA;ISS]
            [GO:0008936 "nicotinamidase activity" evidence=IMP;IDA] [GO:0009737
            "response to abscisic acid stimulus" evidence=IMP] [GO:0019365
            "pyridine nucleotide salvage" evidence=IMP] InterPro:IPR000868
            Pfam:PF00857 GO:GO:0009737 EMBL:CP002685 EMBL:AC006592
            Gene3D:3.40.50.850 SUPFAM:SSF52499 GO:GO:0008936 EMBL:BT002359
            IPI:IPI00540491 RefSeq:NP_565539.1 UniGene:At.39419
            ProteinModelPortal:Q8S8F9 SMR:Q8S8F9 PRIDE:Q8S8F9
            EnsemblPlants:AT2G22570.1 GeneID:816789 KEGG:ath:AT2G22570
            TAIR:At2g22570 InParanoid:Q8S8F9 OMA:CATFDLP PhylomeDB:Q8S8F9
            ProtClustDB:PLN02743 Genevestigator:Q8S8F9 GO:GO:0019365
            Uniprot:Q8S8F9
        Length = 244

 Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
 Identities = 120/181 (66%), Positives = 146/181 (80%)

Query:     1 MINESARLARAFCDRRLPVMAFLDTHHPNKPEDPYPTHCIAGTHESNLVPALQWIEKEPN 60
             M+ ESA+LAR FCDR+ PV+AF+D+HHP+ PE PYP HCI GT ES LVPAL+W+E E  
Sbjct:    62 MVEESAKLAREFCDRKWPVLAFIDSHHPDIPERPYPPHCIIGTEESELVPALKWLESEDC 121

Query:    61 VTIRRKDCFDGYFGSIEDDGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNR 120
              T+RRKDC +G+ GS+E DGSNVFVDWVK  QI+ +VVVG+CTDICV DFV + +SARN 
Sbjct:   122 ATLRRKDCINGFVGSMESDGSNVFVDWVKEKQIKVIVVVGICTDICVFDFVATALSARNH 181

Query:   121 GFLRPLEEVVVYSAACATFDIPTHVATHTKGALAHPQEFMHHVGLYMAKERGAKIANQLS 180
             G L P+E+VVVYS  CATFD+P HVA   KGA AHPQE MHHVGLYMAK RGA++ +++S
Sbjct:   182 GVLSPVEDVVVYSRGCATFDLPLHVAKDIKGAQAHPQELMHHVGLYMAKGRGAQVVSKIS 241

Query:   181 F 181
             F
Sbjct:   242 F 242


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.136   0.430    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      187       187   0.00085  110 3  11 22  0.39    32
                                                     31  0.41    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  604 (64 KB)
  Total size of DFA:  182 KB (2105 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.09u 0.12s 16.21t   Elapsed:  00:00:00
  Total cpu time:  16.09u 0.12s 16.21t   Elapsed:  00:00:00
  Start:  Thu May  9 20:11:41 2013   End:  Thu May  9 20:11:41 2013

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