Query 029834
Match_columns 187
No_of_seqs 101 out of 1219
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 06:32:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029834.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029834hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hb7_A Isochorismatase hydrola 100.0 8.1E-35 2.8E-39 235.3 12.7 148 1-184 34-185 (204)
2 3lqy_A Putative isochorismatas 100.0 1.1E-34 3.9E-39 231.9 11.6 153 1-183 36-188 (190)
3 3eef_A N-carbamoylsarcosine am 100.0 1.3E-34 4.5E-39 229.9 11.0 145 1-183 27-173 (182)
4 3irv_A Cysteine hydrolase; str 100.0 6.3E-34 2.2E-38 234.6 14.7 160 1-184 49-216 (233)
5 3o94_A Nicotinamidase; hydrola 100.0 1.6E-33 5.5E-38 229.4 13.9 148 1-180 50-206 (211)
6 3hu5_A Isochorismatase family 100.0 4.3E-33 1.5E-37 225.1 13.1 149 1-184 35-192 (204)
7 4h17_A Hydrolase, isochorismat 100.0 7E-33 2.4E-37 223.1 12.7 149 1-181 48-196 (197)
8 3gbc_A Pyrazinamidase/nicotina 100.0 1.1E-33 3.7E-38 225.8 7.8 147 1-178 27-185 (186)
9 1nf9_A Phenazine biosynthesis 100.0 1.1E-33 3.9E-38 228.5 6.5 147 1-182 55-206 (207)
10 1im5_A 180AA long hypothetical 100.0 2.4E-32 8.2E-37 216.2 13.9 140 1-177 29-179 (180)
11 3v8e_A Nicotinamidase; hydrola 100.0 7.8E-33 2.7E-37 225.8 10.9 153 1-177 28-215 (216)
12 3r2j_A Alpha/beta-hydrolase-li 100.0 1.3E-32 4.4E-37 226.2 12.3 152 1-184 61-223 (227)
13 3ot4_A Putative isochorismatas 100.0 8.8E-33 3E-37 228.4 10.3 149 1-184 70-225 (236)
14 3oqp_A Putative isochorismatas 100.0 2.4E-32 8.2E-37 222.3 11.8 153 1-184 33-185 (211)
15 3mcw_A Putative hydrolase; iso 100.0 2.1E-32 7.3E-37 220.2 11.3 154 1-184 37-190 (198)
16 3kl2_A Putative isochorismatas 100.0 7.1E-33 2.4E-37 227.3 8.5 149 1-184 57-217 (226)
17 2a67_A Isochorismatase family 100.0 8.3E-32 2.8E-36 211.2 13.8 139 1-178 29-167 (167)
18 1j2r_A Hypothetical isochorism 100.0 5.1E-32 1.8E-36 217.3 12.7 147 1-183 44-197 (199)
19 3tg2_A Vibriobactin-specific i 100.0 2.2E-32 7.4E-37 224.3 8.3 149 1-184 54-204 (223)
20 2wt9_A Nicotinamidase; hydrola 100.0 1.1E-31 3.9E-36 221.1 11.6 150 1-183 56-233 (235)
21 1nba_A N-carbamoylsarcosine am 100.0 2.6E-31 9.1E-36 222.8 12.0 148 1-183 71-229 (264)
22 2fq1_A Isochorismatase; ENTB, 100.0 1.2E-31 4.3E-36 226.4 8.8 149 1-184 58-211 (287)
23 3txy_A Isochorismatase family 100.0 2.8E-31 9.6E-36 213.8 10.0 148 1-184 38-192 (199)
24 1yac_A Ycacgp, YCAC gene produ 99.9 7.4E-27 2.5E-31 189.2 11.6 134 1-183 36-170 (208)
25 2b34_A F35G2.2, MAR1 ribonucle 99.9 2.2E-26 7.6E-31 185.3 6.7 131 1-183 36-166 (199)
26 1x9g_A Putative MAR1; structur 99.9 2.5E-25 8.7E-30 179.4 9.8 128 1-183 42-174 (200)
27 1yzv_A Hypothetical protein; s 99.9 1.1E-25 3.8E-30 182.1 7.2 129 1-181 42-176 (204)
28 1f2d_A 1-aminocyclopropane-1-c 56.6 13 0.00045 30.8 4.7 68 62-138 33-104 (341)
29 3tbh_A O-acetyl serine sulfhyd 54.9 14 0.00046 30.8 4.5 65 62-135 36-104 (334)
30 4d9b_A D-cysteine desulfhydras 51.7 17 0.00059 30.2 4.7 43 87-138 75-118 (342)
31 1j0a_A 1-aminocyclopropane-1-c 51.0 28 0.00096 28.5 5.9 41 88-137 65-106 (325)
32 1vp8_A Hypothetical protein AF 46.5 44 0.0015 26.2 5.9 66 86-178 37-104 (201)
33 4h27_A L-serine dehydratase/L- 45.3 21 0.00073 30.0 4.3 64 62-136 62-126 (364)
34 1tzj_A ACC deaminase, 1-aminoc 45.2 17 0.00059 29.8 3.7 44 86-138 60-104 (338)
35 3vc3_A Beta-cyanoalnine syntha 41.1 43 0.0015 27.8 5.5 85 61-178 50-139 (344)
36 2v03_A Cysteine synthase B; py 40.3 48 0.0016 26.8 5.6 64 62-136 26-94 (303)
37 1y7l_A O-acetylserine sulfhydr 39.5 31 0.0011 28.1 4.3 54 73-136 38-95 (316)
38 3nvt_A 3-deoxy-D-arabino-heptu 38.6 17 0.00059 31.2 2.7 19 84-102 268-288 (385)
39 2rkb_A Serine dehydratase-like 37.7 43 0.0015 27.2 4.9 54 73-136 34-87 (318)
40 3dwg_A Cysteine synthase B; su 37.4 45 0.0016 27.3 5.0 65 62-136 38-106 (325)
41 1v77_A PH1877P, hypothetical p 37.3 20 0.00069 27.7 2.7 29 2-30 146-174 (212)
42 1p5j_A L-serine dehydratase; l 37.3 49 0.0017 27.8 5.3 63 63-136 63-126 (372)
43 4aec_A Cysteine synthase, mito 36.1 56 0.0019 28.4 5.6 66 62-136 139-208 (430)
44 2zsj_A Threonine synthase; PLP 33.4 53 0.0018 27.1 4.9 63 63-136 49-112 (352)
45 1o58_A O-acetylserine sulfhydr 33.2 45 0.0015 27.0 4.3 54 73-136 43-98 (303)
46 1z7w_A Cysteine synthase; tran 32.8 50 0.0017 26.9 4.5 65 62-136 31-100 (322)
47 3pc3_A CG1753, isoform A; CBS, 32.6 41 0.0014 29.6 4.2 65 62-135 78-145 (527)
48 2o2e_A Tryptophan synthase bet 31.3 37 0.0013 29.2 3.6 38 89-135 125-162 (422)
49 2d1f_A Threonine synthase; ami 31.1 70 0.0024 26.6 5.3 64 62-136 54-118 (360)
50 3aey_A Threonine synthase; PLP 31.1 59 0.002 26.9 4.8 63 62-135 46-109 (351)
51 2egu_A Cysteine synthase; O-ac 30.5 70 0.0024 25.8 5.1 65 62-136 30-98 (308)
52 3h7i_A Ribonuclease H, RNAse H 30.4 20 0.00069 30.0 1.7 42 84-133 112-153 (305)
53 1ve1_A O-acetylserine sulfhydr 29.0 86 0.0029 25.2 5.3 65 62-136 25-95 (304)
54 1v8z_A Tryptophan synthase bet 28.8 41 0.0014 28.1 3.4 38 89-135 94-131 (388)
55 3sz8_A 2-dehydro-3-deoxyphosph 27.5 75 0.0026 26.1 4.7 86 3-99 78-168 (285)
56 1qop_B Tryptophan synthase bet 27.0 41 0.0014 28.4 3.1 39 88-135 97-135 (396)
57 2q3b_A Cysteine synthase A; py 26.6 75 0.0026 25.6 4.6 64 63-136 33-100 (313)
58 2pqm_A Cysteine synthase; OASS 25.8 64 0.0022 26.6 4.0 65 62-136 43-111 (343)
59 1t57_A Conserved protein MTH16 24.9 1.6E+02 0.0056 23.0 5.9 67 86-178 45-111 (206)
60 2f9i_B Acetyl-coenzyme A carbo 24.4 66 0.0023 26.3 3.8 23 3-25 143-165 (285)
61 3l6b_A Serine racemase; pyrido 24.0 46 0.0016 27.6 2.8 34 92-135 75-108 (346)
62 1ve5_A Threonine deaminase; ri 24.0 38 0.0013 27.4 2.3 35 92-136 64-98 (311)
63 1x1q_A Tryptophan synthase bet 23.2 38 0.0013 29.0 2.2 38 89-135 121-158 (418)
64 3fs2_A 2-dehydro-3-deoxyphosph 22.9 38 0.0013 28.2 2.0 88 3-99 99-189 (298)
65 1wkv_A Cysteine synthase; homo 22.6 62 0.0021 27.5 3.4 50 95-176 146-195 (389)
66 1jbq_A B, cystathionine beta-s 22.1 84 0.0029 27.2 4.2 66 62-136 126-194 (435)
67 3ss7_X D-serine dehydratase; t 21.2 1E+02 0.0035 26.5 4.5 32 95-135 161-192 (442)
68 2nwq_A Probable short-chain de 20.4 62 0.0021 25.5 2.8 17 83-100 36-52 (272)
69 2xbl_A Phosphoheptose isomeras 20.4 1.1E+02 0.0038 22.3 4.2 20 3-22 130-149 (198)
No 1
>3hb7_A Isochorismatase hydrolase; PS structural genomics, midwest center for structural genomics structure initiative; 2.30A {Alkaliphilus metalliredigens}
Probab=100.00 E-value=8.1e-35 Score=235.33 Aligned_cols=148 Identities=20% Similarity=0.309 Sum_probs=135.9
Q ss_pred ChHHHHHHHHHHh---hCCCcEEEEeeeCCCCCCC-CCCCCCccCCCCCCccccccccccCCCceEEEeCCccccccccc
Q 029834 1 MINESARLARAFC---DRRLPVMAFLDTHHPNKPE-DPYPTHCIAGTHESNLVPALQWIEKEPNVTIRRKDCFDGYFGSI 76 (187)
Q Consensus 1 ~i~~i~~li~~~r---~~g~pVv~t~d~h~~~~~~-~~~p~hc~~gt~G~~l~~~L~~~~~~~~~~vi~K~~~saf~~~~ 76 (187)
++++|++|+++|| ++|+||||+++.|.+.+++ ..||+||++|++|++++++|.+.+ .+.+|.|++||+|+++
T Consensus 34 ii~~i~~Ll~~ar~~~~~g~pVi~t~~~~~~~~~~~~~~~~~~~~gt~g~~i~~~l~~~~---~~~vi~K~~~saF~~t- 109 (204)
T 3hb7_A 34 IIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRPLHAVKGTWGSDFIPELYPQE---DEYIVQKRRHSGFAHT- 109 (204)
T ss_dssp GHHHHHHHHHHHHHSSSSSEEEEEEEECBCCCSCCSSSSCSSCBTTSTTTSBCGGGCCCT---TCEEEEESSSSTTTTS-
T ss_pred HHHHHHHHHHHHHhhhhcCCEEEEEEccCCCCChhhhhcchhccCCCchhhcCHhhCCCC---CCEEEeCCccCCccCc-
Confidence 4789999999999 9999999999999876665 479999999999999999999875 3578999999999985
Q ss_pred cCCCcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhhcccccCCc
Q 029834 77 EDDGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATHTKGALAHP 156 (187)
Q Consensus 77 ~~~~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~~~~~~~~~ 156 (187)
+|.++|+++|+++|+|||++||+||. +|+++|+++|| +|+|++|||++++++.
T Consensus 110 ------~L~~~L~~~gi~~lvi~G~~T~~CV~---~Ta~dA~~~Gy-----~V~vv~Da~as~~~~~------------- 162 (204)
T 3hb7_A 110 ------DLDLYLKEEGIDTVVLTGVWTNVCVR---STATDALANAY-----KVITLSDGTASKTEEM------------- 162 (204)
T ss_dssp ------SHHHHHHHTTCCEEEEEEECTTTHHH---HHHHHHHHTTC-----EEEEEEEEEECSSHHH-------------
T ss_pred ------cHHHHHHHCCCCEEEEEeecccHHHH---HHHHHHHHCCC-----EEEEechhccCCCHHH-------------
Confidence 99999999999999999999999999 99999999999 9999999999998653
Q ss_pred HHHHHHHHHHHHHHcCcEeecccchhhh
Q 029834 157 QEFMHHVGLYMAKERGAKIANQLSFSEQ 184 (187)
Q Consensus 157 ~~~~h~~~l~~~~~~~~~v~~~~~~~~~ 184 (187)
|+.+|..|+ .|+.|+++++++..
T Consensus 163 ----h~~al~~l~-~~a~v~tt~~vl~~ 185 (204)
T 3hb7_A 163 ----HEYGLNDLS-IFTKVMTVDQYIQA 185 (204)
T ss_dssp ----HHHHHHHHH-HHSEEECHHHHHHH
T ss_pred ----HHHHHHHHH-hCCEEeeHHHHHHH
Confidence 788999999 99999999888754
No 2
>3lqy_A Putative isochorismatase hydrolase; structural genomics, PSI-2, PROT structure initiative, midwest center for structural genomic; 1.75A {Oleispira antarctica} SCOP: c.33.1.0
Probab=100.00 E-value=1.1e-34 Score=231.88 Aligned_cols=153 Identities=20% Similarity=0.293 Sum_probs=136.6
Q ss_pred ChHHHHHHHHHHhhCCCcEEEEeeeCCCCCCCCCCCCCccCCCCCCccccccccccCCCceEEEeCCccccccccccCCC
Q 029834 1 MINESARLARAFCDRRLPVMAFLDTHHPNKPEDPYPTHCIAGTHESNLVPALQWIEKEPNVTIRRKDCFDGYFGSIEDDG 80 (187)
Q Consensus 1 ~i~~i~~li~~~r~~g~pVv~t~d~h~~~~~~~~~p~hc~~gt~G~~l~~~L~~~~~~~~~~vi~K~~~saf~~~~~~~~ 80 (187)
+++++++|+++||++|+||||+++.|.. .+++||.+|++|++++++|.+.+. +.+|.|++||+|+++
T Consensus 36 ~i~~i~~l~~~ar~~g~pVi~t~~~~~~-----~~~~~~~~gt~g~~i~~~l~~~~~---~~vi~K~~~saF~~t----- 102 (190)
T 3lqy_A 36 AAEQGAKLLAKFRQQGLPVVHVRHEFPT-----DEAPFFLPGSDGAKIHPSVAAQEG---EAVVLKHQINSFRDT----- 102 (190)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECC-C-----TTCSSSCTTCGGGSBCGGGCCCTT---SCEEEESSSSTTTTS-----
T ss_pred HHHHHHHHHHHHHHCCCeEEEEEEecCC-----CCCCcccCCCCccccCcccCCCCC---CEEEECCCCCccccc-----
Confidence 3689999999999999999999776643 256799999999999999998753 468999999999985
Q ss_pred cchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhhcccccCCcHHHH
Q 029834 81 SNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATHTKGALAHPQEFM 160 (187)
Q Consensus 81 ~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~~~~~~~~~~~~~ 160 (187)
+|.++|+++|+++|+|+|++|++||. +|+++|+++|| +|+|++|||++++.+. ++..+++++.
T Consensus 103 --~L~~~L~~~gi~~lii~G~~T~~CV~---~Ta~da~~~Gy-----~v~vv~Da~~s~~~~~-------~~~~~~a~~~ 165 (190)
T 3lqy_A 103 --DLKKVLDDAGIKKLVIVGAMTHMAID---AVTRAAEDLGY-----ECAVAHDACATLDLEF-------NGITVPAAQV 165 (190)
T ss_dssp --SHHHHHHHC-CCEEEEEEECTTTHHH---HHHHHHHHHTC-----EEEEEEEEEEBCCEEE-------TTEEECHHHH
T ss_pred --hHHHHHHhCCCCEEEEEecCcChHHH---HHHHHHHHCCC-----EEEEechhhccCCccc-------cCccCCHHHH
Confidence 99999999999999999999999999 99999999999 9999999999999753 1345789999
Q ss_pred HHHHHHHHHHcCcEeecccchhh
Q 029834 161 HHVGLYMAKERGAKIANQLSFSE 183 (187)
Q Consensus 161 h~~~l~~~~~~~~~v~~~~~~~~ 183 (187)
|+.+|..|+.+|+.|++++++++
T Consensus 166 h~~~L~~l~~~~a~V~tt~~~l~ 188 (190)
T 3lqy_A 166 HAAFMSALSFAYANVASADELIA 188 (190)
T ss_dssp HHHHHHHHBTTTBEEECHHHHHT
T ss_pred HHHHHHHHhhCcEEEEEHHHHHh
Confidence 99999999999999999999875
No 3
>3eef_A N-carbamoylsarcosine amidase related protein; structural genomics, protein structure initiative, midwest center for structural genomics; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=1.3e-34 Score=229.92 Aligned_cols=145 Identities=20% Similarity=0.367 Sum_probs=131.0
Q ss_pred ChHHHHHHHHHHhhCCCcEEEEeeeCCCCCCC-CCCCCCccCCCCCCccccccccccCCCceEEEeCCccccccccccCC
Q 029834 1 MINESARLARAFCDRRLPVMAFLDTHHPNKPE-DPYPTHCIAGTHESNLVPALQWIEKEPNVTIRRKDCFDGYFGSIEDD 79 (187)
Q Consensus 1 ~i~~i~~li~~~r~~g~pVv~t~d~h~~~~~~-~~~p~hc~~gt~G~~l~~~L~~~~~~~~~~vi~K~~~saf~~~~~~~ 79 (187)
+++++++|+++||++|+||||++++|.+++++ ..||+||+.|++|++++|+|.|.+ .+.+|.|.+||+|+++
T Consensus 27 ~i~~i~~l~~~ar~~g~pVi~t~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~l~~~~---~~~vi~K~~~saF~~t---- 99 (182)
T 3eef_A 27 TVGPARKVIETFRRSGLPVVYVNDSHYPDDPEIRIWGRHSMKGDDGSEVIDEIRPSA---GDYVLEKHAYSGFYGT---- 99 (182)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECBCTTSTTHHHHCSCSBTTSGGGSBCGGGCCCT---TCEEEEESSSSTTTTS----
T ss_pred HHHHHHHHHHHHHHcCCeEEEEecccCCCChhhhhcchhhcCCCchhhhhhhhCCCC---CcEEEeecccCCCCCC----
Confidence 36899999999999999999999999887766 369999999999999999999865 3578999999999985
Q ss_pred CcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhhcccccCCcHHH
Q 029834 80 GSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATHTKGALAHPQEF 159 (187)
Q Consensus 80 ~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~~~~~~~~~~~~ 159 (187)
+|.++|+++|+++|+|||++||+||. +|+++|+++|| +|+|++|||++ ++.
T Consensus 100 ---~L~~~L~~~gi~~lii~G~~T~~CV~---~Ta~da~~~Gy-----~V~vv~Da~as--~~~---------------- 150 (182)
T 3eef_A 100 ---NLDMILRANGIDTVVLIGLDADICVR---HTAADALYRNY-----RIIVVEDAVAA--RID---------------- 150 (182)
T ss_dssp ---SHHHHHHHTTCCEEEEEEECTTTHHH---HHHHHHHHTTC-----EEEEEEEEEEC--SSC----------------
T ss_pred ---CHHHHHHhcCCCeEEEEEeccCHHHH---HHHHHHHHCCC-----EEEEehhhcCC--HHH----------------
Confidence 99999999999999999999999999 99999999999 99999999999 433
Q ss_pred HHHHHHHHHHH-cCcEeecccchhh
Q 029834 160 MHHVGLYMAKE-RGAKIANQLSFSE 183 (187)
Q Consensus 160 ~h~~~l~~~~~-~~~~v~~~~~~~~ 183 (187)
|+.+ ..|+. .|+.|+++++++.
T Consensus 151 -~~~a-~~m~~~~ga~v~~~~~vl~ 173 (182)
T 3eef_A 151 -PNWK-DYFTRVYGATVKRSDEIEG 173 (182)
T ss_dssp -TTHH-HHHHHHHCCEEECTTCCCC
T ss_pred -HHHH-HHHHHhcCcEEeEHHHHHH
Confidence 4566 78888 6999999988765
No 4
>3irv_A Cysteine hydrolase; structural genomics, PSI-2, protein structure initiative, CY hydrolase; 1.60A {Pseudomonas syringae PV}
Probab=100.00 E-value=6.3e-34 Score=234.56 Aligned_cols=160 Identities=15% Similarity=0.235 Sum_probs=142.5
Q ss_pred ChHHHHHHHHHHhhCCCcEEEEeeeCCCCCCCC-----CCCC---CccCCCCCCccccccccccCCCceEEEeCCccccc
Q 029834 1 MINESARLARAFCDRRLPVMAFLDTHHPNKPED-----PYPT---HCIAGTHESNLVPALQWIEKEPNVTIRRKDCFDGY 72 (187)
Q Consensus 1 ~i~~i~~li~~~r~~g~pVv~t~d~h~~~~~~~-----~~p~---hc~~gt~G~~l~~~L~~~~~~~~~~vi~K~~~saf 72 (187)
++++|++|+++||++|+||||+++.|.+++.+. .||+ ||.+|++|++++++|.+.+ .+.+|.|++||+|
T Consensus 49 vv~~i~~Ll~~ar~~g~pVi~t~~~~~~~~~~~~~~~~~~p~~~~~~~~gt~g~ei~~~l~p~~---~d~vi~K~~~saF 125 (233)
T 3irv_A 49 IVQPIQKLLQAARAAQVMVIYLRHIVRGDGSDTGRMRDLYPNVDQILARHDPDVEVIEALAPQS---DDVIVDKLFYSGF 125 (233)
T ss_dssp GHHHHHHHHHHHHHTTCEEEEEEECBCSSSTTCSHHHHHSTTHHHHSBTTCGGGSBCGGGCCCT---TSEEEEESSSCSS
T ss_pred HHHHHHHHHHHHHHcCCeEEEEEeecCCCccchhhhhhhcCcccccccCCCCccccchhhCCCC---CCEEEECCccCCC
Confidence 478999999999999999999999987765542 3776 8999999999999999865 3578999999999
Q ss_pred cccccCCCcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhhcccc
Q 029834 73 FGSIEDDGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATHTKGA 152 (187)
Q Consensus 73 ~~~~~~~~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~~~~~ 152 (187)
+++ +|.++|+++|+++|||||++|++||. +|+++|+++|| +|+|++|||++++.+.. +.
T Consensus 126 ~~t-------~L~~~L~~~gi~~lvi~G~~T~~CV~---~Ta~dA~~~Gy-----~V~vv~Da~as~d~~~~------~~ 184 (233)
T 3irv_A 126 HNT-------DLDTVLRARDVDTIIVCGTVTNVCCE---TTIRDGVHREY-----KVIALSDANAAMDYPDV------GF 184 (233)
T ss_dssp TTS-------THHHHHHHTTCCEEEEEEECTTTHHH---HHHHHHHHTTC-----EEEEEEEEEECCCBCCS------SS
T ss_pred cCC-------cHHHHHHhCCCCeEEEEeecccHHHH---HHHHHHHHCCC-----EEEEechhhccCccccc------cc
Confidence 985 99999999999999999999999999 99999999999 99999999999986543 22
Q ss_pred cCCcHHHHHHHHHHHHHHcCcEeecccchhhh
Q 029834 153 LAHPQEFMHHVGLYMAKERGAKIANQLSFSEQ 184 (187)
Q Consensus 153 ~~~~~~~~h~~~l~~~~~~~~~v~~~~~~~~~ 184 (187)
..++.++.|+.+|..|+.+|+.|+++++++..
T Consensus 185 ~~~~~~~~h~~aL~~l~~~~a~V~tt~evl~~ 216 (233)
T 3irv_A 185 GAVSAADVQRISLTTIAYEFGEVTTTAEVIRR 216 (233)
T ss_dssp CCBCHHHHHHHHHHHHHHHTSEEECHHHHHHH
T ss_pred ccCChHHHHHHHHHHHHhcCcEEeEHHHHHHH
Confidence 34578889999999999999999999988764
No 5
>3o94_A Nicotinamidase; hydrolase; 1.60A {Streptococcus pneumoniae} PDB: 3o90_A 3o91_A* 3o92_A* 3o93_A* 3s2s_A
Probab=100.00 E-value=1.6e-33 Score=229.40 Aligned_cols=148 Identities=22% Similarity=0.329 Sum_probs=131.7
Q ss_pred ChHHHHHHHHHHhhCCCcEEEEeeeCCCCCCC----CCCCCCccCCCCCCcccccccccc----CCCceEEEeCCccccc
Q 029834 1 MINESARLARAFCDRRLPVMAFLDTHHPNKPE----DPYPTHCIAGTHESNLVPALQWIE----KEPNVTIRRKDCFDGY 72 (187)
Q Consensus 1 ~i~~i~~li~~~r~~g~pVv~t~d~h~~~~~~----~~~p~hc~~gt~G~~l~~~L~~~~----~~~~~~vi~K~~~saf 72 (187)
++++|++|+++||++|+||||++++|.++++. ..||+||++||+|++++++|.+.. ..+.+.++.|.+||+|
T Consensus 50 ii~~i~~Li~~aR~~g~pVi~t~d~h~~~~~~~~~~~~~p~hcv~gt~G~el~~~L~~~~~~~~p~~~d~vi~K~~~saF 129 (211)
T 3o94_A 50 ISDAISKVTRLAFERGDYIFFTIDAHEENDCFHPESKLFPPHNLIGTSGRNLYGDLGIFYQEHGSDSRVFWMDKRHYSAF 129 (211)
T ss_dssp THHHHHHHHHHHHHTTCEEEEEEECBCTTCTTCGGGGTSCSCSBTTSGGGSBCTHHHHHHHHHTTSTTEEEEEESSSSSS
T ss_pred HHHHHHHHHHHHHHcCCeEEEEEeecCCCCccCcccccccccccCCChhHhhcHHHHHhhhhcCCCCCcEEEEecccCcC
Confidence 47899999999999999999999999876542 369999999999999999997521 1125789999999999
Q ss_pred cccccCCCcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhhcccc
Q 029834 73 FGSIEDDGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATHTKGA 152 (187)
Q Consensus 73 ~~~~~~~~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~~~~~ 152 (187)
++| +|.++|+++|+++|+|||++|++||. +|+++|+++|| +|+|++|||++++++.
T Consensus 130 ~~t-------~L~~~L~~~gi~~lvi~G~~T~~CV~---~Ta~~a~~~Gy-----~v~vv~Da~~~~~~~~--------- 185 (211)
T 3o94_A 130 SGT-------DLDIRLRERRVSTVILTGVLTDISVL---HTAIDAYNLGY-----DIEIVKPAVASIWPEN--------- 185 (211)
T ss_dssp TTS-------SHHHHHHHTTCCEEEEEEECTTTHHH---HHHHHHHHTTC-----EEEEEEEEEECSCHHH---------
T ss_pred CCc-------hHHHHHHhCCCCeEEEEeeccChHHH---HHHHHHHHCCC-----EEEEechhhcCCCHHH---------
Confidence 985 99999999999999999999999999 99999999999 9999999999998754
Q ss_pred cCCcHHHHHHHHHHHHHH-cCcEeecccc
Q 029834 153 LAHPQEFMHHVGLYMAKE-RGAKIANQLS 180 (187)
Q Consensus 153 ~~~~~~~~h~~~l~~~~~-~~~~v~~~~~ 180 (187)
|+.+|..|+. .|+.|+++.-
T Consensus 186 --------h~~aL~~m~~~~G~~i~ts~~ 206 (211)
T 3o94_A 186 --------HQFALGHFKNTLGAKLVDENL 206 (211)
T ss_dssp --------HHHHHHHHHHTSCCEEECTTS
T ss_pred --------HHHHHHHHHHHCCcEEechhh
Confidence 6899999999 8999888743
No 6
>3hu5_A Isochorismatase family protein; structural genomics, protein structure INI NEW YORK structural genomix research consortium, nysgxrc; 1.50A {Desulfovibrio vulgaris}
Probab=100.00 E-value=4.3e-33 Score=225.11 Aligned_cols=149 Identities=17% Similarity=0.256 Sum_probs=132.0
Q ss_pred ChHHHHHHHHHHhhCCCcEEEEeeeCCCCCCC------CCCCC---CccCCCCCCccccccccccCCCceEEEeCCcccc
Q 029834 1 MINESARLARAFCDRRLPVMAFLDTHHPNKPE------DPYPT---HCIAGTHESNLVPALQWIEKEPNVTIRRKDCFDG 71 (187)
Q Consensus 1 ~i~~i~~li~~~r~~g~pVv~t~d~h~~~~~~------~~~p~---hc~~gt~G~~l~~~L~~~~~~~~~~vi~K~~~sa 71 (187)
++++|++|+++||++|+||||+...|.+++.+ ..||+ +|++||+|++++|+|.+.+ .+.+|.|++||+
T Consensus 35 iv~~i~~L~~~ar~~g~pVi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~g~ei~~~l~~~~---~~~vi~K~~~sa 111 (204)
T 3hu5_A 35 TVPVIAGLLAKARAEGWMVLHVVRAHRADGSDAEKSREHLFLEGGGLCVAGTPGAEIVAGLEPAS---GETVLVKTRFSA 111 (204)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEEECCBCTTSTTSCGGGGGGGSSSCCSSBTTSGGGSBCTTCCCCT---TCEEEECSSSST
T ss_pred HHHHHHHHHHHHHHCCCeEEEEEcccCCCcccccccccccCCcccccccCCCcccccccccCCCC---CCEEEECCccCC
Confidence 37899999999999999999976556555433 13553 5999999999999999875 357899999999
Q ss_pred ccccccCCCcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhhccc
Q 029834 72 YFGSIEDDGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATHTKG 151 (187)
Q Consensus 72 f~~~~~~~~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~~~~ 151 (187)
|+++ +|.++|+++|+++|+|||++|++||. +|+++|+++|| +|+|++|||++++++.
T Consensus 112 F~~t-------~L~~~L~~~gi~~lvi~G~~T~~CV~---~Ta~da~~~Gy-----~V~vv~Da~as~~~~~-------- 168 (204)
T 3hu5_A 112 FMGT-------ECDMLLRRRGVDTLLVSGTQYPNCIR---GTAVDAFALDY-----DVVVVTDACSARTPGV-------- 168 (204)
T ss_dssp TTTS-------SHHHHHHHTTCCEEEEEEECTTTHHH---HHHHHHHHTTC-----EEEEEEEEEECSSHHH--------
T ss_pred CCCc-------CHHHHHHhCCCCeEEEeeeccchHHH---HHHHHHHHCCC-----EEEEehhhhCCCCHHH--------
Confidence 9985 99999999999999999999999999 99999999999 9999999999988653
Q ss_pred ccCCcHHHHHHHHHHHHHHcCcEeecccchhhh
Q 029834 152 ALAHPQEFMHHVGLYMAKERGAKIANQLSFSEQ 184 (187)
Q Consensus 152 ~~~~~~~~~h~~~l~~~~~~~~~v~~~~~~~~~ 184 (187)
|+.+|..|+..|+.|+++++++..
T Consensus 169 ---------h~~al~~m~~~g~~v~tt~e~l~~ 192 (204)
T 3hu5_A 169 ---------AESNINDMRAMGITCVPLTALDDV 192 (204)
T ss_dssp ---------HHHHHHHHHHHTCEEECGGGHHHH
T ss_pred ---------HHHHHHHHHHhCCEEEEHHHHHHH
Confidence 688999999999999999999865
No 7
>4h17_A Hydrolase, isochorismatase family; rossmann-like fold, structural genomics, joint center for ST genomics, JCSG; 1.60A {Pseudomonas putida KT2440}
Probab=100.00 E-value=7e-33 Score=223.07 Aligned_cols=149 Identities=17% Similarity=0.203 Sum_probs=135.5
Q ss_pred ChHHHHHHHHHHhhCCCcEEEEeeeCCCCCCCCCCCCCccCCCCCCccccccccccCCCceEEEeCCccccccccccCCC
Q 029834 1 MINESARLARAFCDRRLPVMAFLDTHHPNKPEDPYPTHCIAGTHESNLVPALQWIEKEPNVTIRRKDCFDGYFGSIEDDG 80 (187)
Q Consensus 1 ~i~~i~~li~~~r~~g~pVv~t~d~h~~~~~~~~~p~hc~~gt~G~~l~~~L~~~~~~~~~~vi~K~~~saf~~~~~~~~ 80 (187)
++++|++|+++||++|+||||+++.|.++. ++|..|++| +++|+|.+.+ .+.+|.|++||+|+++
T Consensus 48 ~i~~i~~l~~~ar~~g~pVi~t~~~~~~~~------~~~~~g~~g-~~~~~l~~~~---~~~vi~K~~~saF~~t----- 112 (197)
T 4h17_A 48 AVANIARLLDAARKSGRPIIHVRHLGTVGG------RFDPQGPAG-QFIPGLEPLE---GEIVIEKRMPNAFKNT----- 112 (197)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECCCTTS------TTCTTSGGG-SBCTTCCCCT---TCEEEEESSSSTTTTT-----
T ss_pred HHHHHHHHHHHHHHCCCeEEEEEEecCCCC------ccccCCCCc-cCCHhhCCCC---CCEEEeCCcCCCcccc-----
Confidence 378999999999999999999988876532 479999999 9999999875 3579999999999985
Q ss_pred cchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhhcccccCCcHHHH
Q 029834 81 SNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATHTKGALAHPQEFM 160 (187)
Q Consensus 81 ~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~~~~~~~~~~~~~ 160 (187)
+|.++|+++|+++|+|||++|++||. +|+++|+++|| +|+|++|||++++.+.+. + .++++++
T Consensus 113 --~L~~~L~~~gi~~lvi~G~~T~~CV~---~Ta~da~~~Gy-----~V~vv~Da~as~~~~~~~------~-~~~a~~~ 175 (197)
T 4h17_A 113 --KLHETLQELGHLDLIVCGFMSHSSVS---TTVRRAKDYGY-----RCTLVEDASATRDLAFKD------G-VIPAAQI 175 (197)
T ss_dssp --CHHHHHHHHTCSEEEEEEECTTTHHH---HHHHHHHHTTC-----EEEEEEEEEECCCEEETT------E-EECHHHH
T ss_pred --hHHHHHHhcCCCEEEEEeeCcCHHHH---HHHHHHHHCCC-----EEEEeCccccccCccccc------C-CCCHHHH
Confidence 99999999999999999999999999 99999999999 999999999999987652 2 5789999
Q ss_pred HHHHHHHHHHcCcEeecccch
Q 029834 161 HHVGLYMAKERGAKIANQLSF 181 (187)
Q Consensus 161 h~~~l~~~~~~~~~v~~~~~~ 181 (187)
|+.+|..|+.+|++|++++++
T Consensus 176 h~~aL~~l~~~~a~V~tt~e~ 196 (197)
T 4h17_A 176 HQCEMAVMADNFACVAPTASL 196 (197)
T ss_dssp HHHHHHHHHHHTCEEECGGGT
T ss_pred HHHHHHHHHhcceEEeEHHHc
Confidence 999999999999999999886
No 8
>3gbc_A Pyrazinamidase/nicotinamidas PNCA; nicotinamidase - pyrazinamidase, resistance to pyrazinamide, hydrolase; 2.20A {Mycobacterium tuberculosis} PDB: 3pl1_A
Probab=100.00 E-value=1.1e-33 Score=225.82 Aligned_cols=147 Identities=22% Similarity=0.384 Sum_probs=127.3
Q ss_pred ChHHHHHHHHHHhhCCCcEEEEeeeCC-CCC-----CC--CCCCCCccCCCCCCccccccccccCCCceEEEeCCc----
Q 029834 1 MINESARLARAFCDRRLPVMAFLDTHH-PNK-----PE--DPYPTHCIAGTHESNLVPALQWIEKEPNVTIRRKDC---- 68 (187)
Q Consensus 1 ~i~~i~~li~~~r~~g~pVv~t~d~h~-~~~-----~~--~~~p~hc~~gt~G~~l~~~L~~~~~~~~~~vi~K~~---- 68 (187)
++++|++|++++|+ +.|||||+|+|. ++. ++ ..||+||++||+|++++|+|.+.+ .+.+|.|++
T Consensus 27 vv~~i~~li~~~r~-~~~Vi~t~d~h~~p~~~~~~~~~~~~~wp~hc~~gt~g~~~~~~l~~~~---~d~vi~K~~~~~~ 102 (186)
T 3gbc_A 27 LARAISDYLAEAAD-YHHVVATKDFHIDPGDHFSGTPDYSSSWPPHCVSGTPGADFHPSLDTSA---IEAVFYKGAYTGA 102 (186)
T ss_dssp HHHHHTTSSSSCCC-CSEEEEEEECBSCCGGGBCSSCCSSSCBCCCSBTTSGGGSBCSSSCCTT---CCEEEEECSSSCC
T ss_pred HHHHHHHHHHHhcc-CCEEEEEEEEcCCCCcccccCccccccCcccccCCCCcccCChhhhccC---CcEEEECCCCCcc
Confidence 36899999999999 999999999995 221 22 369999999999999999999875 357899988
Q ss_pred cccccccccCCCcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhh
Q 029834 69 FDGYFGSIEDDGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATH 148 (187)
Q Consensus 69 ~saf~~~~~~~~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~ 148 (187)
||+|+++.. ..|+|.++|+++|+++|+|||++||+||. +|+++|+++|| +|+|++|||++++++.
T Consensus 103 ysaF~~~~~--~~t~L~~~L~~~gi~~lvv~G~~t~~CV~---~Ta~da~~~G~-----~v~v~~Da~~~~~~~~----- 167 (186)
T 3gbc_A 103 YSGFEGVDE--NGTPLLNWLRQRGVDEVDVVGIATDHCVR---QTAEDAVRNGL-----ATRVLVDLTAGVSADT----- 167 (186)
T ss_dssp CCGGGCBCS--SSCBHHHHHHHTTCCEEEEEEECTTTHHH---HHHHHHHHTTC-----EEEEEEEEEECSCHHH-----
T ss_pred ccccccCCC--CCCcHHHHHHhcCCCEEEEEEecccHHHH---HHHHHHHHCCC-----eEEEEhhhcCCCCHHH-----
Confidence 599983211 01599999999999999999999999999 99999999999 9999999999998653
Q ss_pred cccccCCcHHHHHHHHHHHHHHcCcEeecc
Q 029834 149 TKGALAHPQEFMHHVGLYMAKERGAKIANQ 178 (187)
Q Consensus 149 ~~~~~~~~~~~~h~~~l~~~~~~~~~v~~~ 178 (187)
|+.+|..|+..|+.|++|
T Consensus 168 ------------~~~al~~m~~~G~~i~~s 185 (186)
T 3gbc_A 168 ------------TVAALEEMRTASVELVCS 185 (186)
T ss_dssp ------------HHHHHHHHHHTTCEEECC
T ss_pred ------------HHHHHHHHHHcCCEEeec
Confidence 688999999999999886
No 9
>1nf9_A Phenazine biosynthesis protein PHZD; isochorismatase, enzyme, phenazine pathway, hydrolase; HET: BOG; 1.50A {Pseudomonas aeruginosa} SCOP: c.33.1.3 PDB: 1nf8_A* 3r77_A*
Probab=100.00 E-value=1.1e-33 Score=228.53 Aligned_cols=147 Identities=19% Similarity=0.218 Sum_probs=131.5
Q ss_pred ChHHHHHHHHHHhhCCCcEEEEeeeCCCCCCC-----CCCCCCccCCCCCCccccccccccCCCceEEEeCCcccccccc
Q 029834 1 MINESARLARAFCDRRLPVMAFLDTHHPNKPE-----DPYPTHCIAGTHESNLVPALQWIEKEPNVTIRRKDCFDGYFGS 75 (187)
Q Consensus 1 ~i~~i~~li~~~r~~g~pVv~t~d~h~~~~~~-----~~~p~hc~~gt~G~~l~~~L~~~~~~~~~~vi~K~~~saf~~~ 75 (187)
++++|++|+++||++|+||||+++.|.++..+ ..||+||..|++|+++.++|.+.+ .+.+|.|.+||+|+++
T Consensus 55 ~i~~i~~l~~~ar~~g~pVi~t~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~i~~~l~p~~---~~~vi~K~~~saF~~t 131 (207)
T 1nf9_A 55 LVANAARLRRWCVEQGVQIAYTAQPGSMTEEQRGLLKDFWGPGMRASPADREVVEELAPGP---DDWLLTKWRYSAFFHS 131 (207)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEEECCSSCCHHHHTTHHHHHTTCCCSSHHHHSBCGGGCCCT---TSEEEECCSSSTTTTS
T ss_pred HHHHHHHHHHHHHHcCCeEEEEeecCCCChhhhhhhhhhcCCCCCCCCchhhhchhhCCCC---CCEEEecCCCCCcCCC
Confidence 37899999999999999999998877543211 258899999999999999998865 3578999999999985
Q ss_pred ccCCCcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhhcccccCC
Q 029834 76 IEDDGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATHTKGALAH 155 (187)
Q Consensus 76 ~~~~~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~~~~~~~~ 155 (187)
+|.++|+++|+++|+|||++||+||. +|+++|+++|| +|+|++|||++++++.
T Consensus 132 -------~L~~~L~~~gi~~lvi~G~~T~~CV~---~Ta~dA~~~Gy-----~V~vv~Da~as~~~~~------------ 184 (207)
T 1nf9_A 132 -------DLLQRMRAAGRDQLVLCGVYAHVGVL---ISTVDAYSNDI-----QPFLVADAIADFSEAH------------ 184 (207)
T ss_dssp -------SHHHHHHHTTCCEEEEEEECTTTHHH---HHHHHHHHTTC-----EEEEEEEEEECSSHHH------------
T ss_pred -------cHHHHHHHcCCCEEEEEeeecChHHH---HHHHHHHHCCC-----EEEEeCcccCCCCHHH------------
Confidence 99999999999999999999999999 99999999999 9999999999998653
Q ss_pred cHHHHHHHHHHHHHHcCcEeecccchh
Q 029834 156 PQEFMHHVGLYMAKERGAKIANQLSFS 182 (187)
Q Consensus 156 ~~~~~h~~~l~~~~~~~~~v~~~~~~~ 182 (187)
|+.+|..|+..|+.|+++++++
T Consensus 185 -----h~~al~~~~~~~~~v~~t~~~l 206 (207)
T 1nf9_A 185 -----HRMALEYAASRCAMVVTTDEVL 206 (207)
T ss_dssp -----HHHHHHHHHHHTCEEECHHHHH
T ss_pred -----HHHHHHHHHHhCcEEccHHHHh
Confidence 7889999999999999998875
No 10
>1im5_A 180AA long hypothetical pyrazinamidase/nicotinamidase; pyrazinamide, tuberculosis, PZA resistance, drug resistance, metal ION catalysis; 1.65A {Pyrococcus horikoshii} SCOP: c.33.1.3 PDB: 1ilw_A
Probab=99.98 E-value=2.4e-32 Score=216.24 Aligned_cols=140 Identities=25% Similarity=0.462 Sum_probs=126.4
Q ss_pred ChHHHHHHHHHHhhCCCcEEEEeeeCCCCCCC-----CCCCCCccCCCCCCccccccccccCCCceEEEeCCc------c
Q 029834 1 MINESARLARAFCDRRLPVMAFLDTHHPNKPE-----DPYPTHCIAGTHESNLVPALQWIEKEPNVTIRRKDC------F 69 (187)
Q Consensus 1 ~i~~i~~li~~~r~~g~pVv~t~d~h~~~~~~-----~~~p~hc~~gt~G~~l~~~L~~~~~~~~~~vi~K~~------~ 69 (187)
+++++++|+++||++|+||||++++|.+++.+ ..||+||++|++|+++. |.+.. .+.++.|++ |
T Consensus 29 ~v~~i~~l~~~ar~~g~pVi~t~~~~~~~~~~f~~~~~~~p~~~~~gt~g~~i~--l~~~~---~~~vi~K~~~~~~~~~ 103 (180)
T 1im5_A 29 IIPKVNEYIRKFKEKGALIVATRDWHPENHISFRERGGPWPRHCVQNTPGAEFV--VDLPE---DAVIISKATEPDKEAY 103 (180)
T ss_dssp GHHHHHHHHHHHHHTTCEEEEEEECBCTTCTTBGGGTCSBCSCSBTTSGGGSBC--SCCCT---TCEEEEECCSTTCCCC
T ss_pred HHHHHHHHHHHHHHcCCEEEEEecccCCCCcChhhcCCCCchhhcCCCCCeEEE--EecCC---CcEEEECCCCCCCccc
Confidence 47899999999999999999999999876543 36999999999999999 76432 257899999 9
Q ss_pred ccccccccCCCcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhhc
Q 029834 70 DGYFGSIEDDGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATHT 149 (187)
Q Consensus 70 saf~~~~~~~~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~~ 149 (187)
|+|+++ +|.++|+++|+++|+|+|++||+||. +|+++|+++|| +|+|++|||++++++.
T Consensus 104 saF~~t-------~L~~~L~~~gi~~lvi~G~~t~~CV~---~Ta~da~~~Gy-----~v~vv~Da~~~~~~~~------ 162 (180)
T 1im5_A 104 SGFEGT-------DLAKILRGNGVKRVYICGVATEYCVR---ATALDALKHGF-----EVYLLRDAVKGIKPED------ 162 (180)
T ss_dssp STTTTS-------SHHHHHHHTTCCEEEEEEECTTTHHH---HHHHHHHHTTC-----EEEEEEEEEECSCHHH------
T ss_pred cCccCC-------CHHHHHHhCCCCEEEEEEeecCHHHH---HHHHHHHHCCC-----EEEEehhhccCCCHHH------
Confidence 999985 99999999999999999999999999 99999999999 9999999999998653
Q ss_pred ccccCCcHHHHHHHHHHHHHHcCcEeec
Q 029834 150 KGALAHPQEFMHHVGLYMAKERGAKIAN 177 (187)
Q Consensus 150 ~~~~~~~~~~~h~~~l~~~~~~~~~v~~ 177 (187)
|+.+|..|+..|+.|++
T Consensus 163 -----------h~~al~~m~~~g~~v~~ 179 (180)
T 1im5_A 163 -----------EERALEEMKSRGIKIVQ 179 (180)
T ss_dssp -----------HHHHHHHHHHTTCEEEC
T ss_pred -----------HHHHHHHHHHcCCEEEe
Confidence 78999999999999875
No 11
>3v8e_A Nicotinamidase; hydrolase; HET: JJJ; 2.71A {Saccharomyces cerevisiae} PDB: 2h0r_A
Probab=99.98 E-value=7.8e-33 Score=225.76 Aligned_cols=153 Identities=16% Similarity=0.209 Sum_probs=129.1
Q ss_pred ChHHHHHHHHHHhhCCCcEEEEeeeCCCCCCC-----------------------------CCCCCCccCCCCCCccccc
Q 029834 1 MINESARLARAFCDRRLPVMAFLDTHHPNKPE-----------------------------DPYPTHCIAGTHESNLVPA 51 (187)
Q Consensus 1 ~i~~i~~li~~~r~~g~pVv~t~d~h~~~~~~-----------------------------~~~p~hc~~gt~G~~l~~~ 51 (187)
++++|++|++.+|++++|||||+|+|++++.+ ..||+||++||+|++++|+
T Consensus 28 iv~~i~~ll~~~r~~~~~Vi~t~d~H~~~h~sf~~~~~g~~~f~~~~~~~p~~~~~~~~~~~~wp~hcv~gt~G~ei~~~ 107 (216)
T 3v8e_A 28 LINPISDLMQDADRDWHRIVVTRDWHPSRHISFAKNHKDKEPYSTYTYHSPRPGDDSTQEGILWPVHCVKNTWGSQLVDQ 107 (216)
T ss_dssp GHHHHHHHHHCGGGCEEEEEEEEECBCTTCTTBGGGSTTCCTTCEEEEECSSTTCCCEEEEECBCSCCBTTSGGGSBCHH
T ss_pred HHHHHHHHHHHHhhcCCEEEEecccCCCcCcchHhcCCCCCCcceeeccccccccccccccccCchhhcCCCCccccCHh
Confidence 47899999999999999999999999876521 1599999999999999999
Q ss_pred cccccCCCceEEEeC------CccccccccccCCCcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCC
Q 029834 52 LQWIEKEPNVTIRRK------DCFDGYFGSIEDDGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRP 125 (187)
Q Consensus 52 L~~~~~~~~~~vi~K------~~~saf~~~~~~~~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~ 125 (187)
|.+....+.+.+|.| .+||+|++... ...|+|.++|+++|+++|+|||++|++||. +|+++|+++||
T Consensus 108 l~~~~~~~~~~vi~K~~~~~~~~ySaF~~~~~-~~~t~L~~~L~~~gi~~l~i~G~~t~~CV~---~Ta~~a~~~g~--- 180 (216)
T 3v8e_A 108 IMDQVVTKHIKIVDKGFLTDREYYSAFHDIWN-FHKTDMNKYLEKHHTDEVYIVGVALEYXVK---ATAISAAELGY--- 180 (216)
T ss_dssp HHHHHHHHTCEEEEECCSTTSCCCSSSBCTTS-CSBCSHHHHHHHTTCCEEEEEEECTTTHHH---HHHHHHHHTTC---
T ss_pred HHhhhccCccEEEECCccCCCccccccccCCc-CCCchHHHHHHhCCCCEEEEEEeccccHHH---HHHHHHHHCCC---
Confidence 998410013578899 46899962110 012699999999999999999999999999 99999999999
Q ss_pred cceEEEeCCccccCCccchhhhhcccccCCcHHHHHHHHHHHHHHcCcEeec
Q 029834 126 LEEVVVYSAACATFDIPTHVATHTKGALAHPQEFMHHVGLYMAKERGAKIAN 177 (187)
Q Consensus 126 ~~~V~Vv~Da~~s~~~~~~~a~~~~~~~~~~~~~~h~~~l~~~~~~~~~v~~ 177 (187)
+|+|++|||++++.+.+ .|+.+|..|+..|+.+++
T Consensus 181 --~v~v~~Da~~~~~~~~~---------------~~~~al~~m~~~Gv~i~~ 215 (216)
T 3v8e_A 181 --KTTVLLDYTRPISDDPE---------------VINKVKEELKAHNINVVD 215 (216)
T ss_dssp --EEEEEEEEEECSSCCHH---------------HHHHHHHHHHHTTCEEEC
T ss_pred --EEEEeccccCCCCcccH---------------HHHHHHHHHHHcCCEEeC
Confidence 99999999999998621 278999999999999876
No 12
>3r2j_A Alpha/beta-hydrolase-like protein; nicotinamidase, cytoplasmic; 2.68A {Leishmania infantum}
Probab=99.98 E-value=1.3e-32 Score=226.24 Aligned_cols=152 Identities=21% Similarity=0.333 Sum_probs=133.0
Q ss_pred ChHHHHHHHHHHhhCCCcEEEEeeeCCCCCCC-----CCCCCCccCCCCCCccccccccccCCCceEEEeCC------cc
Q 029834 1 MINESARLARAFCDRRLPVMAFLDTHHPNKPE-----DPYPTHCIAGTHESNLVPALQWIEKEPNVTIRRKD------CF 69 (187)
Q Consensus 1 ~i~~i~~li~~~r~~g~pVv~t~d~h~~~~~~-----~~~p~hc~~gt~G~~l~~~L~~~~~~~~~~vi~K~------~~ 69 (187)
++++|++|++++|. .|||||+++|++++.+ +.||+||++|++|++++++|.+.+ .+.+|.|+ +|
T Consensus 61 iv~~i~~Li~~ar~--~pVi~t~d~h~~~~~~f~~~~g~wp~h~~~gt~G~ei~~~L~~~~---~d~vi~K~~~~~~~~~ 135 (227)
T 3r2j_A 61 LLDGINAVSSQLPF--RYQVATQDWHPENHCSFVTHGGPWPPHCVQGSAGAQLHAGLHTQR---INAVIRKGVTQQADSY 135 (227)
T ss_dssp GHHHHHHHHHHSCC--SEEEEEEECBCTTCTTBGGGTSSBCSCSBTTSGGGSBCTTSCCTT---CCEEEEESCSTTCCCS
T ss_pred HHHHHHHHHHHcCC--CeEEEEEeeCCCCccchhhhcCcCcccccCCCchhHHhHhhcccC---CCEEEECCCccccccc
Confidence 47899999999986 5999999999776543 469999999999999999999875 35789999 99
Q ss_pred ccccccccCCCcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhhc
Q 029834 70 DGYFGSIEDDGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATHT 149 (187)
Q Consensus 70 saf~~~~~~~~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~~ 149 (187)
|+|++... ..|+|.++|+++|+++|+|||++|++||. +|+++|+++|| +|+|++|||++++++.
T Consensus 136 SaF~~~~~--~~t~L~~~L~~~gi~~lvv~G~~T~~CV~---~Ta~dA~~~Gy-----~V~Vv~Da~as~~~~~------ 199 (227)
T 3r2j_A 136 SAFVEDNG--VSTGLAGLLHSIGARRVFVCGVAYDFCVF---FTAMDARKNGF-----SVVLLEDLTAAVDDAA------ 199 (227)
T ss_dssp SSSBCTTS--CBCSHHHHHHHHTCCEEEEEESCTTTHHH---HHHHHHHHTTC-----EEEEEEEEECCSCGGG------
T ss_pred chhccCCC--CCCcHHHHHHHcCCCEEEEEEeccchHHH---HHHHHHHHCCC-----EEEEEhHhhCCCCHHH------
Confidence 99942100 11599999999999999999999999999 99999999999 9999999999999864
Q ss_pred ccccCCcHHHHHHHHHHHHHHcCcEeecccchhhh
Q 029834 150 KGALAHPQEFMHHVGLYMAKERGAKIANQLSFSEQ 184 (187)
Q Consensus 150 ~~~~~~~~~~~h~~~l~~~~~~~~~v~~~~~~~~~ 184 (187)
|+.+|..|+..|+.|+++++++..
T Consensus 200 -----------h~~aL~~m~~~g~~v~~s~~vl~~ 223 (227)
T 3r2j_A 200 -----------WSARTAELKDAGVVLLKSSALVAE 223 (227)
T ss_dssp -----------HHHHHHHHHTTTCEEECGGGEECC
T ss_pred -----------HHHHHHHHHHcCCEEEEHHHHHHH
Confidence 688999999999999999988764
No 13
>3ot4_A Putative isochorismatase; NICF, maleamate hydrolase, hydrol; 2.40A {Bordetella bronchiseptica} PDB: 3uao_A
Probab=99.98 E-value=8.8e-33 Score=228.43 Aligned_cols=149 Identities=19% Similarity=0.292 Sum_probs=133.5
Q ss_pred ChHHHHHHHHHHhhCCCcEEEEeeeCCCCCCCC-CC----C--CCccCCCCCCccccccccccCCCceEEEeCCcccccc
Q 029834 1 MINESARLARAFCDRRLPVMAFLDTHHPNKPED-PY----P--THCIAGTHESNLVPALQWIEKEPNVTIRRKDCFDGYF 73 (187)
Q Consensus 1 ~i~~i~~li~~~r~~g~pVv~t~d~h~~~~~~~-~~----p--~hc~~gt~G~~l~~~L~~~~~~~~~~vi~K~~~saf~ 73 (187)
++++|++|+++||++|+|||||+++|.++..+. .| | .||++||+|++++|+|.+.+ .+.+|.|++||+|+
T Consensus 70 vv~~i~~Ll~~aR~~g~pVI~t~~~~~~~~~~~~~~~~~~~~~~~~~~gt~g~ei~~eL~p~~---~d~vi~K~~~saF~ 146 (236)
T 3ot4_A 70 AIETTRTVLAAARERGWAVAHSRIVYADDDADGNIFSIKVPGMLTLKEHAPASAIVPQLAPQA---GEYVVRKSTPSAFY 146 (236)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEEEECBCTTCTTCCHHHHHSGGGTTCBTTCGGGSBCGGGCCCT---TCEEEEESSSSTTT
T ss_pred HHHHHHHHHHHHHHcCCeEEEEEeccCCCccccchhhhcCCccccccCCCCccccCHhhcccC---CceEEECCccCccc
Confidence 378999999999999999999999997765442 24 3 69999999999999999875 35789999999999
Q ss_pred ccccCCCcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhhccccc
Q 029834 74 GSIEDDGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATHTKGAL 153 (187)
Q Consensus 74 ~~~~~~~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~~~~~~ 153 (187)
++ +|.++|+++|+++|+|||++|++||. +|+++|+++|| +|+|++|||++++++.
T Consensus 147 ~t-------~L~~~L~~~gi~~lvi~G~~T~~CV~---~Ta~da~~~Gy-----~V~vv~Da~as~~~~~---------- 201 (236)
T 3ot4_A 147 GT-------MLAAWLAQRGVQTLLVAGATTSGCVR---ASVVDAMSAGF-----RPLVLSDCVGDRALGP---------- 201 (236)
T ss_dssp TS-------SHHHHHHHTTCCEEEEEESCTTTHHH---HHHHHHHHHTC-----EEEEEEEEECCSCHHH----------
T ss_pred Cc-------hHHHHHHHCCCCEEEEeCccCcHHHH---HHHHHHHHCCC-----EEEEechhcCCCCHHH----------
Confidence 85 99999999999999999999999999 99999999999 9999999999987653
Q ss_pred CCcHHHHHHHHHHHHHHcCcEeecccchhhh
Q 029834 154 AHPQEFMHHVGLYMAKERGAKIANQLSFSEQ 184 (187)
Q Consensus 154 ~~~~~~~h~~~l~~~~~~~~~v~~~~~~~~~ 184 (187)
|+.+|..|+..|+.|++++++++.
T Consensus 202 -------h~~aL~~m~~~~a~v~tt~evl~~ 225 (236)
T 3ot4_A 202 -------HEANLFDMRQKYAAVMTHDEALAK 225 (236)
T ss_dssp -------HHHHHHHHHHHTSEEECHHHHHC-
T ss_pred -------HHHHHHHHHhcCCEEeeHHHHHHH
Confidence 688999999999999999888654
No 14
>3oqp_A Putative isochorismatase; catalytic triad, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; 1.22A {Burkholderia xenovorans}
Probab=99.98 E-value=2.4e-32 Score=222.31 Aligned_cols=153 Identities=18% Similarity=0.201 Sum_probs=135.5
Q ss_pred ChHHHHHHHHHHhhCCCcEEEEeeeCCCCCCCCCCCCCccCCCCCCccccccccccCCCceEEEeCCccccccccccCCC
Q 029834 1 MINESARLARAFCDRRLPVMAFLDTHHPNKPEDPYPTHCIAGTHESNLVPALQWIEKEPNVTIRRKDCFDGYFGSIEDDG 80 (187)
Q Consensus 1 ~i~~i~~li~~~r~~g~pVv~t~d~h~~~~~~~~~p~hc~~gt~G~~l~~~L~~~~~~~~~~vi~K~~~saf~~~~~~~~ 80 (187)
+++++++|+++||++|+||||+++.|+.+. ++|..|++|++++|+|.+.+ .+.+|.|++||+|+++
T Consensus 33 ~i~~i~~Ll~~ar~~g~pVi~t~~~~p~~~------~~~~~gs~g~~i~~~l~~~~---~d~vi~K~~~saF~~t----- 98 (211)
T 3oqp_A 33 SLANIARAMDAARAAGVPVVIVQNFAPAGS------PLFARGSNGAELHPVVSERA---RDHYVEKSLPSAFTGT----- 98 (211)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEECBCTTC------SSSBTTSGGGSBCHHHHTSC---CSEEEEESSSCSSTTS-----
T ss_pred HHHHHHHHHHHHHHCCCeEEEEEecCCCCC------ccccCCCCccccccccCCCC---CcEEEECCccCCCccc-----
Confidence 368999999999999999999977664332 35788999999999999865 3579999999999985
Q ss_pred cchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhhcccccCCcHHHH
Q 029834 81 SNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATHTKGALAHPQEFM 160 (187)
Q Consensus 81 ~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~~~~~~~~~~~~~ 160 (187)
+|.++|+++|+++|+|||++|++||. +|+++|+++|| +|+|++|||++++.+.+. + ..+++++
T Consensus 99 --~L~~~L~~~gi~~lvi~G~~T~~CV~---~Ta~dA~~~Gy-----~V~vv~Da~as~~~~~~~------g-~~~a~~~ 161 (211)
T 3oqp_A 99 --DLAGWLAARQIDTLTVTGYMTHNCDA---STINHAVHSGL-----AVEFLHDATGSVPYENSA------G-FASAEEI 161 (211)
T ss_dssp --SHHHHHHTTTCCEEEEEEECTTTHHH---HHHHHHHHTTC-----EEEEEEEEEEBCCEEETT------E-EECHHHH
T ss_pred --HHHHHHHhCCCCEEEEEeeccCHHHH---HHHHHHHHCCC-----eEEEechheecccccccc------C-CCCHHHH
Confidence 99999999999999999999999999 99999999999 999999999999987541 1 1278899
Q ss_pred HHHHHHHHHHcCcEeecccchhhh
Q 029834 161 HHVGLYMAKERGAKIANQLSFSEQ 184 (187)
Q Consensus 161 h~~~l~~~~~~~~~v~~~~~~~~~ 184 (187)
|+.+|..|..+|+.|+++++++..
T Consensus 162 h~~~l~~l~~~~a~V~tt~e~l~~ 185 (211)
T 3oqp_A 162 HRVFSVVLQSRFAAVASTDEWIAA 185 (211)
T ss_dssp HHHHHHHHHHHTCEEECHHHHHHH
T ss_pred HHHHHHHHHhccEEEeEHHHHHHH
Confidence 999999999999999999998764
No 15
>3mcw_A Putative hydrolase; isochorismatase family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.06A {Chromobacterium violaceum}
Probab=99.98 E-value=2.1e-32 Score=220.21 Aligned_cols=154 Identities=19% Similarity=0.233 Sum_probs=134.5
Q ss_pred ChHHHHHHHHHHhhCCCcEEEEeeeCCCCCCCCCCCCCccCCCCCCccccccccccCCCceEEEeCCccccccccccCCC
Q 029834 1 MINESARLARAFCDRRLPVMAFLDTHHPNKPEDPYPTHCIAGTHESNLVPALQWIEKEPNVTIRRKDCFDGYFGSIEDDG 80 (187)
Q Consensus 1 ~i~~i~~li~~~r~~g~pVv~t~d~h~~~~~~~~~p~hc~~gt~G~~l~~~L~~~~~~~~~~vi~K~~~saf~~~~~~~~ 80 (187)
+++++++|+++||++|+||||+++.|...+ . .+.+|++|++++++|.+.+ .+.+|.|++||+|+++
T Consensus 37 ~i~~i~~l~~~ar~~g~pVi~~~~~~~~~~--~----~~~~g~~g~~i~~~l~~~~---~~~vi~K~~~saF~~t----- 102 (198)
T 3mcw_A 37 AEQACAGLLQAWRARGLPLIHIRHDSVEPN--S----TYRPGQPGHAFKPEVEPRP---GETVIAKQTNSAFIGT----- 102 (198)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEECCCCTT--C----TTCTTSGGGSBCGGGCCCT---TCEEEEESSSSTTTTS-----
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEEecCCCC--C----CCCCcCCccccCcccCCCC---CCEEEEcCccCccccc-----
Confidence 368999999999999999999977765332 1 1245899999999999875 3579999999999985
Q ss_pred cchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhhcccccCCcHHHH
Q 029834 81 SNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATHTKGALAHPQEFM 160 (187)
Q Consensus 81 ~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~~~~~~~~~~~~~ 160 (187)
+|.++|+++|+++|+|+|++||+||. +|+++|+++|| +|+|++|||++++.+.+. +...++++.
T Consensus 103 --~L~~~L~~~gi~~lvi~G~~T~~CV~---~Ta~da~~~Gy-----~v~vv~Da~~s~~~~~~~------g~~~~~~~~ 166 (198)
T 3mcw_A 103 --GLEALLRANGWLELVVAGVSTSNSVE---ATVRMAGNLGF-----AVCLAEDGCFTFDKTDWH------GRRRSADEV 166 (198)
T ss_dssp --SHHHHHHHHTCCEEEEEEECTTTHHH---HHHHHHHHTTC-----EEEEEEEEEECBCEECTT------SCEECHHHH
T ss_pred --hHHHHHHcCCCCeEEEEEcCcChHHH---HHHHHHHHCCC-----EEEEeCcccccccccccc------cccCCHHHH
Confidence 99999999999999999999999999 99999999999 999999999999986552 223478899
Q ss_pred HHHHHHHHHHcCcEeecccchhhh
Q 029834 161 HHVGLYMAKERGAKIANQLSFSEQ 184 (187)
Q Consensus 161 h~~~l~~~~~~~~~v~~~~~~~~~ 184 (187)
|+.+|..|+.+|+.|+++++++..
T Consensus 167 h~~al~~l~~~~a~v~tt~~~l~~ 190 (198)
T 3mcw_A 167 HAMSLANLDGEYCRVCGSADILAA 190 (198)
T ss_dssp HHHHHHHHBTTTBEEECHHHHHHH
T ss_pred HHHHHHHHHhccEEEeeHHHHHHH
Confidence 999999999999999999888753
No 16
>3kl2_A Putative isochorismatase; structural genomics, unknown function, PSI-2, protein struct initiative; 2.30A {Streptomyces avermitilis} SCOP: c.33.1.0
Probab=99.98 E-value=7.1e-33 Score=227.34 Aligned_cols=149 Identities=15% Similarity=0.158 Sum_probs=133.0
Q ss_pred ChHHHHHHHHHHhhCCCcEEEEeeeCCCCCCCCC-----------CCCCccCCCCCCccccccccccCCCceEEEeCCc-
Q 029834 1 MINESARLARAFCDRRLPVMAFLDTHHPNKPEDP-----------YPTHCIAGTHESNLVPALQWIEKEPNVTIRRKDC- 68 (187)
Q Consensus 1 ~i~~i~~li~~~r~~g~pVv~t~d~h~~~~~~~~-----------~p~hc~~gt~G~~l~~~L~~~~~~~~~~vi~K~~- 68 (187)
++++|++|+++||++|+||||+++.|.+++++.. ||.||.+|++|++++|+|.+.++ +.+|.|.+
T Consensus 57 vv~~i~~Ll~~ar~~g~pVi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~g~ei~~~L~p~~~---d~vi~Kk~~ 133 (226)
T 3kl2_A 57 MLANTVAVVDAARQAGVPIMHAPITFAEGYGELTRHPYGILKGVVDGKAFVKGTWGAAIVDELAPVNG---DIVIEGKRG 133 (226)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCCBCTTCTTSCSSCCTHHHHHHHHTCSBTTSTTTSBCGGGCCCTT---CEECCCCCS
T ss_pred HHHHHHHHHHHHHHcCCeEEEEEeeeCCCccccccccchhhhcccCCCcccCCCcccccCHhhCCCCC---CEEEecCCc
Confidence 3689999999999999999999999988776632 57899999999999999998763 46788665
Q ss_pred cccccccccCCCcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhh
Q 029834 69 FDGYFGSIEDDGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATH 148 (187)
Q Consensus 69 ~saf~~~~~~~~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~ 148 (187)
||+|+++ +|.++|+++|+++|||||++|++||. +|+++|+++|| +|+|++|||++++++.
T Consensus 134 ~SaF~~t-------~L~~~L~~~gi~~lii~G~~T~~CV~---~Ta~da~~~Gy-----~v~vv~Da~~s~~~~~----- 193 (226)
T 3kl2_A 134 LDTFAST-------NLDFILRSKGVDTIVLGGFLTNCCVE---STMRTGYERGF-----RVITLTDCVAATSQEE----- 193 (226)
T ss_dssp SSHHHHS-------SHHHHHHHHTCCEEEEEEECTTTHHH---HHHHHHHHTTC-----EEEEEEEEEECSCHHH-----
T ss_pred cCCccCc-------hHHHHHhCCCCCcEEEeccCcchHHH---HHHHHHHHCCC-----EEEEechhhcCCCHHH-----
Confidence 9999985 99999999999999999999999999 99999999999 9999999999998764
Q ss_pred cccccCCcHHHHHHHHHHHHHHcCcEeecccchhhh
Q 029834 149 TKGALAHPQEFMHHVGLYMAKERGAKIANQLSFSEQ 184 (187)
Q Consensus 149 ~~~~~~~~~~~~h~~~l~~~~~~~~~v~~~~~~~~~ 184 (187)
|+.+|..+...++.|+++.|++..
T Consensus 194 ------------h~~aL~~~~~~~a~v~tt~e~l~~ 217 (226)
T 3kl2_A 194 ------------HNNAISYDFPMFSVPMTSADVIAA 217 (226)
T ss_dssp ------------HHHHHHHTHHHHSEEECHHHHHHH
T ss_pred ------------HHHHHHHHHHhceEEeeHHHHHHH
Confidence 688898777789999999988764
No 17
>2a67_A Isochorismatase family protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 2.00A {Enterococcus faecalis}
Probab=99.97 E-value=8.3e-32 Score=211.21 Aligned_cols=139 Identities=14% Similarity=0.184 Sum_probs=126.1
Q ss_pred ChHHHHHHHHHHhhCCCcEEEEeeeCCCCCCCCCCCCCccCCCCCCccccccccccCCCceEEEeCCccccccccccCCC
Q 029834 1 MINESARLARAFCDRRLPVMAFLDTHHPNKPEDPYPTHCIAGTHESNLVPALQWIEKEPNVTIRRKDCFDGYFGSIEDDG 80 (187)
Q Consensus 1 ~i~~i~~li~~~r~~g~pVv~t~d~h~~~~~~~~~p~hc~~gt~G~~l~~~L~~~~~~~~~~vi~K~~~saf~~~~~~~~ 80 (187)
+++++++|+++||++|+||||+++.+ ++|.+|++|+++.|+|.|.+ .+.++.|++||+|+++
T Consensus 29 ~~~~i~~li~~ar~~g~pVi~t~~~~----------~~~~~g~~g~~i~~~l~~~~---~~~vi~K~~~saF~~t----- 90 (167)
T 2a67_A 29 VLDKVNQRIAVYRQHHAPIIFVQHEE----------TELPFGSDSWQLFEKLDTQP---TDFFIRKTHANAFYQT----- 90 (167)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECB----------TTBCTTSTTTSBCTTSCCCT---TSEEEEESSSSTTTTS-----
T ss_pred HHHHHHHHHHHHHHCCCeEEEEEeCC----------CCccCCCCcceechhhCCCC---CCEEEECCCCCCCCCC-----
Confidence 36899999999999999999996531 37899999999999998875 3578999999999985
Q ss_pred cchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhhcccccCCcHHHH
Q 029834 81 SNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATHTKGALAHPQEFM 160 (187)
Q Consensus 81 ~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~~~~~~~~~~~~~ 160 (187)
+|.++|+++|+++|+|+|++|++||. +|+++|+++|| +|+|++|||++++.+. ++++++
T Consensus 91 --~L~~~L~~~gi~~lvv~G~~T~~CV~---~Ta~da~~~Gy-----~v~v~~Da~~s~~~~~-----------~~a~~~ 149 (167)
T 2a67_A 91 --NLNDLLTEQAVQTLEIAGVQTEFCVD---TTIRMAHGLGY-----TCLMTPKTTSTLDNGH-----------LTAAQI 149 (167)
T ss_dssp --SHHHHHHHTTCCEEEEEEECTTTHHH---HHHHHHHHHTC-----EEEECTTCEECCCCSS-----------SCHHHH
T ss_pred --cHHHHHHHCCCCEEEEEecccChHHH---HHHHHHHHCCC-----EEEEechhhcCCCccc-----------CCHHHH
Confidence 99999999999999999999999999 99999999999 9999999999999864 478899
Q ss_pred HHHHHHHHHHcCcEeecc
Q 029834 161 HHVGLYMAKERGAKIANQ 178 (187)
Q Consensus 161 h~~~l~~~~~~~~~v~~~ 178 (187)
|+..+..|..++++|+++
T Consensus 150 ~~~~l~~l~~~~a~v~~t 167 (167)
T 2a67_A 150 IQHHEAIWAGRFLTFLSL 167 (167)
T ss_dssp HHHHHHHHBTTTBEECC-
T ss_pred HHHHHHHHhccceEEEeC
Confidence 999999999999999874
No 18
>1j2r_A Hypothetical isochorismatase family protein YECD; parallel beta-sheet 3-2-1-4-5-6, alpha-beta-alpha motif, TET structural genomics; 1.30A {Escherichia coli} SCOP: c.33.1.3
Probab=99.97 E-value=5.1e-32 Score=217.31 Aligned_cols=147 Identities=19% Similarity=0.274 Sum_probs=128.9
Q ss_pred ChHHHHHHHHHHhhCCCcEEEEeeeCCCCCCC-------CCCCCCccCCCCCCccccccccccCCCceEEEeCCcccccc
Q 029834 1 MINESARLARAFCDRRLPVMAFLDTHHPNKPE-------DPYPTHCIAGTHESNLVPALQWIEKEPNVTIRRKDCFDGYF 73 (187)
Q Consensus 1 ~i~~i~~li~~~r~~g~pVv~t~d~h~~~~~~-------~~~p~hc~~gt~G~~l~~~L~~~~~~~~~~vi~K~~~saf~ 73 (187)
++++|++|+++||++|+||||+++.|.++..+ ..||.||+.+++ ++++|+|.+.+ .+.+|.|++||+|+
T Consensus 44 ~i~~i~~ll~~ar~~g~pVi~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~---~~~vi~K~~~saF~ 119 (199)
T 1j2r_A 44 VVNRAGKLAAKFRASGQPVFLVRVGWSADYAEALKQPVDAPSPAKVLPENW-WQHPAALGTTD---SDIEIIKRQWGAFY 119 (199)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECCCTTCTTSCCCCCSSCCCCCCCCTTT-TCCCGGGCCCT---TSEEEEESSSSSST
T ss_pred HHHHHHHHHHHHHHcCCcEEEEEeeeCCCccccccCcccccCCCcCcCCCh-hHhChhhCCCC---CCEEEeCCCcCCcC
Confidence 37899999999999999999998545544322 358999987654 49999998865 35789999999999
Q ss_pred ccccCCCcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhhccccc
Q 029834 74 GSIEDDGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATHTKGAL 153 (187)
Q Consensus 74 ~~~~~~~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~~~~~~ 153 (187)
++ +|.++|+++|+++|+|||++||+||. +|+++|+++|| +|+|++|||++++++.
T Consensus 120 ~t-------~L~~~L~~~gi~~lvi~G~~T~~CV~---~Ta~da~~~Gy-----~v~vv~Da~as~~~~~---------- 174 (199)
T 1j2r_A 120 GT-------DLELQLRRRGIDTIVLCGISTNIGVE---STARNAWELGF-----NLVIAEDACSAASAEQ---------- 174 (199)
T ss_dssp TS-------SHHHHHHHTTCCEEEEEEECTTTHHH---HHHHHHHHTTC-----EEEEEEEEEEBSSHHH----------
T ss_pred CC-------CHHHHHHHCCCCEEEEEeeeccHHHH---HHHHHHHHCCC-----EEEEehhhcCCCCHHH----------
Confidence 85 99999999999999999999999999 99999999999 9999999999998643
Q ss_pred CCcHHHHHHHHHHHHHHcCcEeecccchhh
Q 029834 154 AHPQEFMHHVGLYMAKERGAKIANQLSFSE 183 (187)
Q Consensus 154 ~~~~~~~h~~~l~~~~~~~~~v~~~~~~~~ 183 (187)
|+.+|..|+..|+.|+++++++.
T Consensus 175 -------h~~al~~~~~~~~~v~~t~~~l~ 197 (199)
T 1j2r_A 175 -------HNNSINHIYPRIARVRSVEEILN 197 (199)
T ss_dssp -------HHHHHHHTHHHHSEEECHHHHHH
T ss_pred -------HHHHHHHHHHheeEEeeHHHHHh
Confidence 78899999999999999988864
No 19
>3tg2_A Vibriobactin-specific isochorismatase; hydrolase; HET: ISC PGE; 1.10A {Vibrio cholerae} PDB: 3tb4_A*
Probab=99.97 E-value=2.2e-32 Score=224.31 Aligned_cols=149 Identities=15% Similarity=0.217 Sum_probs=129.4
Q ss_pred ChHHHHHHHHHHhhCCCcEEEEeeeCCCCCCCC-CCCCCccC-CCCCCccccccccccCCCceEEEeCCccccccccccC
Q 029834 1 MINESARLARAFCDRRLPVMAFLDTHHPNKPED-PYPTHCIA-GTHESNLVPALQWIEKEPNVTIRRKDCFDGYFGSIED 78 (187)
Q Consensus 1 ~i~~i~~li~~~r~~g~pVv~t~d~h~~~~~~~-~~p~hc~~-gt~G~~l~~~L~~~~~~~~~~vi~K~~~saf~~~~~~ 78 (187)
++++|++|+++||++|+|||||+++|.++..+. .|+.+|.. +++|++++++|.|.+ .+.+|.|.+||+|+++
T Consensus 54 vv~~i~~Li~~ar~~g~pVi~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~eL~p~~---~d~vi~K~~~saF~~t--- 127 (223)
T 3tg2_A 54 LIKHIQQLKAHAKQAGIPVVYTAQPANQDPAERALLSDFWGPGLSEETAIIAPLAPES---GDVQLTKWRYSAFKKS--- 127 (223)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECCSSCCHHHHTTHHHHHCSCCSSCCSBCGGGCCCT---TSEEEECCSSSTTTTS---
T ss_pred HHHHHHHHHHHHHHcCCeEEEEEEeCCCCchhhcccccccCCCCCcccccChhhCCCC---CCEEEECCcccccccc---
Confidence 478999999999999999999999988765442 22222322 367889999999876 3679999999999995
Q ss_pred CCcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhhcccccCCcHH
Q 029834 79 DGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATHTKGALAHPQE 158 (187)
Q Consensus 79 ~~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~~~~~~~~~~~ 158 (187)
+|.++|+++|+++|+|||++|++||. +|+++|+++|| +|+|++|||++++++.
T Consensus 128 ----~L~~~L~~~gi~~lii~G~~t~~CV~---~Ta~da~~~Gy-----~v~vv~Da~as~~~~~--------------- 180 (223)
T 3tg2_A 128 ----PLLDWLRETGRDQLIITGVYAHIGIL---STALDAFMFDI-----QPFVIGDGVADFSLSD--------------- 180 (223)
T ss_dssp ----SHHHHHHHHTCCEEEEEEECTTTHHH---HHHHHHHHTTC-----EEEEEEEEEECSSHHH---------------
T ss_pred ----cHHHHHHhcCcCceEEeecccChHHH---HHHHHHHHCCC-----EEEEeCcccCCCCHHH---------------
Confidence 99999999999999999999999999 99999999999 9999999999998754
Q ss_pred HHHHHHHHHHHHcCcEeecccchhhh
Q 029834 159 FMHHVGLYMAKERGAKIANQLSFSEQ 184 (187)
Q Consensus 159 ~~h~~~l~~~~~~~~~v~~~~~~~~~ 184 (187)
|+.+|..|+.+|+.|+++++++..
T Consensus 181 --h~~aL~~~~~~~a~v~tte~~l~e 204 (223)
T 3tg2_A 181 --HEFSLRYISGRTGAVKSTQQACLE 204 (223)
T ss_dssp --HHHHHHHHHHHTCEEECHHHHHHH
T ss_pred --HHHHHHHHHHcCCEEecHHHHHHH
Confidence 689999999999999999887653
No 20
>2wt9_A Nicotinamidase; hydrolase, pyrazinamidase; HET: GOL; 1.65A {Acinetobacter baumannii} PDB: 2wta_A*
Probab=99.97 E-value=1.1e-31 Score=221.14 Aligned_cols=150 Identities=24% Similarity=0.391 Sum_probs=126.4
Q ss_pred ChHHHHHHHHHHhhCCCcEEEEeeeCCCCCCC---------------------CCCCCCccCCCCCCccccccccccCCC
Q 029834 1 MINESARLARAFCDRRLPVMAFLDTHHPNKPE---------------------DPYPTHCIAGTHESNLVPALQWIEKEP 59 (187)
Q Consensus 1 ~i~~i~~li~~~r~~g~pVv~t~d~h~~~~~~---------------------~~~p~hc~~gt~G~~l~~~L~~~~~~~ 59 (187)
++++|++|+++ ++||||++++|++++.+ ..||+||++||+|++++|+|.+.+
T Consensus 56 vv~~i~~Li~~----~~pVi~t~~~h~~~~~~f~~~~~~~~~~~~~~~~~~~~~~wp~hcv~gt~g~~i~~~L~~~~--- 128 (235)
T 2wt9_A 56 IIPTINQLAGC----FENVVLTQDWHPDNHISFAANHPGKQPFETIELDYGSQVLWPKHCIQGTHDAEFHPDLNIPT--- 128 (235)
T ss_dssp GHHHHHHHHTT----CSCEEEEEECBCTTCTTBGGGSTTCCTTCEEEETTEEEECBCSCCBTTSGGGSBCTTCCCTT---
T ss_pred HHHHHHHHHHc----CCEEEEEeccCCCcchhhHhcCCCCCcccccccccccccCCcchhcCCCchhHhChhhcccC---
Confidence 47889999875 48999999999776421 249999999999999999998865
Q ss_pred ceEEEeCC------ccccccccccCCCcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeC
Q 029834 60 NVTIRRKD------CFDGYFGSIEDDGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYS 133 (187)
Q Consensus 60 ~~~vi~K~------~~saf~~~~~~~~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~ 133 (187)
.+.+|.|+ +||+|++.. ....|+|.++|+++|+++|||||++||+||. +|+++|+++|| +|+|++
T Consensus 129 ~d~vi~K~~~~~~~~~SaF~~~~-~~~~T~L~~~L~~~gi~~lvv~G~~T~~CV~---~Ta~dA~~~Gy-----~V~Vv~ 199 (235)
T 2wt9_A 129 AQLIIRKGFHAHIDSYSAFMEAD-HTTMTGLTGYLKERGIDTVYVVGIATDFCVA---WTALDAVKQGF-----KTLVIE 199 (235)
T ss_dssp CCEEEEECCSTTCCCSSSSBCTT-SCCBCSHHHHHHHTTCCEEEEEEECTTTHHH---HHHHHHHHTTC-----EEEEEE
T ss_pred CCEEEECCCCCCCccccccccCC-ccCCCcHHHHHHHCCCCEEEEEEeCccHHHH---HHHHHHHhCCC-----EEEEec
Confidence 35788886 699998310 0012599999999999999999999999999 99999999999 999999
Q ss_pred CccccCC-ccchhhhhcccccCCcHHHHHHHHHHHHHHcCcEeecccchhh
Q 029834 134 AACATFD-IPTHVATHTKGALAHPQEFMHHVGLYMAKERGAKIANQLSFSE 183 (187)
Q Consensus 134 Da~~s~~-~~~~~a~~~~~~~~~~~~~~h~~~l~~~~~~~~~v~~~~~~~~ 183 (187)
|||++++ ++. |+.+|..|+..|+.|+++++++.
T Consensus 200 Da~as~~~~~~-----------------~~~aL~~m~~~g~~v~tt~~vl~ 233 (235)
T 2wt9_A 200 DACKGIDLNGS-----------------LEQAWQTMQQQGVVRIQSTDLLN 233 (235)
T ss_dssp EEEECCCSTTH-----------------HHHHHHHHHHTTCEEECHHHHC-
T ss_pred hhccCCChhHH-----------------HHHHHHHHHHcCCEEEEHHHHHh
Confidence 9999998 543 68889999999999999988764
No 21
>1nba_A N-carbamoylsarcosine amidohydrolase; hydrolase(IN linear amides); 2.00A {Arthrobacter SP} SCOP: c.33.1.3
Probab=99.97 E-value=2.6e-31 Score=222.84 Aligned_cols=148 Identities=15% Similarity=0.184 Sum_probs=130.9
Q ss_pred ChHHHHHHHHHHhhCCCcEEEEeeeCCCCC-----CC-CC----CCCC-ccCCCCCCccccccccccCCCceEEEeCCcc
Q 029834 1 MINESARLARAFCDRRLPVMAFLDTHHPNK-----PE-DP----YPTH-CIAGTHESNLVPALQWIEKEPNVTIRRKDCF 69 (187)
Q Consensus 1 ~i~~i~~li~~~r~~g~pVv~t~d~h~~~~-----~~-~~----~p~h-c~~gt~G~~l~~~L~~~~~~~~~~vi~K~~~ 69 (187)
++++|++|++++|++|+||||+++.|.+++ .+ .. ||.+ |..|++|++++++|.+.+ .+.+|.|++|
T Consensus 71 vi~~i~~Ll~~aR~~g~pVI~t~~~~~~~~~~s~l~~~~~~~~~~p~~~~~~gt~g~ei~~~L~p~~---~d~vi~K~~~ 147 (264)
T 1nba_A 71 IIPNVQRINEAARAKGVPVFYTTNVYRNRDASSGTNDMGLWYSKIPTETLPADSYWAQIDDRIAPAD---GEVVIEKNRA 147 (264)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEECBSCCCTTSTTCSCGGGGGTSCGGGCBTTSGGGSBCGGGCCCT---TCEEEEESSS
T ss_pred HHHHHHHHHHHHHHcCCEEEEEEeccCCCccccccccccccccccccccccCCCCccccccccCCCC---CCEEEeCCcC
Confidence 378999999999999999999999997654 22 23 4433 678999999999999875 3678999999
Q ss_pred ccccccccCCCcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhhc
Q 029834 70 DGYFGSIEDDGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATHT 149 (187)
Q Consensus 70 saf~~~~~~~~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~~ 149 (187)
|+|+++ +|..+|+++|+++|||||++||+||. +|+++|+++|| +|+|++|||++++++.
T Consensus 148 SaF~~T-------~L~~~Lr~~gi~~lvI~Gv~T~~CV~---~Ta~dA~~~Gy-----~V~Vv~DA~as~~~~~------ 206 (264)
T 1nba_A 148 SAFPGT-------NLELFLTSNRIDTLIVTGATAAGCVR---HTVEDAIAKGF-----RPIIPRETIGDRVPGV------ 206 (264)
T ss_dssp SSSTTS-------SHHHHHHHTTCCEEEEEEECTTTHHH---HHHHHHHHHTC-----EEEEEGGGEECSSSSH------
T ss_pred CCcccc-------hHHHHHHhCCCCEEEEEecCcCCHHH---HHHHHHHHCCC-----EEEEeccccCCCCHHH------
Confidence 999985 99999999999999999999999999 99999999999 9999999999987653
Q ss_pred ccccCCcHHHHHHHHHHHHHHcCcEeecccchhh
Q 029834 150 KGALAHPQEFMHHVGLYMAKERGAKIANQLSFSE 183 (187)
Q Consensus 150 ~~~~~~~~~~~h~~~l~~~~~~~~~v~~~~~~~~ 183 (187)
|+.+|..|+..|+.|+++.+++.
T Consensus 207 -----------h~~aL~~m~~~~~~vitt~e~l~ 229 (264)
T 1nba_A 207 -----------VQWNLYDIDNKFGDVESTDSVVQ 229 (264)
T ss_dssp -----------HHHHHHHHHHHTCEEECHHHHHH
T ss_pred -----------HHHHHHHHHhcCcEEeEHHHHHH
Confidence 78899999999999999988765
No 22
>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}
Probab=99.97 E-value=1.2e-31 Score=226.42 Aligned_cols=149 Identities=16% Similarity=0.190 Sum_probs=132.8
Q ss_pred ChHHHHHHHHHHhhCCCcEEEEeeeCCCCCCC-----CCCCCCccCCCCCCccccccccccCCCceEEEeCCcccccccc
Q 029834 1 MINESARLARAFCDRRLPVMAFLDTHHPNKPE-----DPYPTHCIAGTHESNLVPALQWIEKEPNVTIRRKDCFDGYFGS 75 (187)
Q Consensus 1 ~i~~i~~li~~~r~~g~pVv~t~d~h~~~~~~-----~~~p~hc~~gt~G~~l~~~L~~~~~~~~~~vi~K~~~saf~~~ 75 (187)
++++|++|+++||+.|+|||||++.|.++..+ ..|++||..|++|+++.++|.|.+ .+.+|.|++||+|+++
T Consensus 58 ~i~~i~~L~~~ar~~g~pVi~t~~~~~~~~~~~~~~~~~~~~~~~~g~~g~ei~~~l~p~~---~d~vi~K~~~saF~~t 134 (287)
T 2fq1_A 58 VIANIAALRDYCKQHNIPVYYTAQPKEQSDEDRALLNDMWGPGLTRSPEQQKVVDRLTPDA---DDTVLVKWRYSAFHRS 134 (287)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECCSCCCHHHHTTHHHHHTTGGGGCGGGCSBCGGGCCCT---TSEEEECCSSSTTTTS
T ss_pred HHHHHHHHHHHHHHcCCeEEEEeecCCCChhhhhhhhhhccCCCCCCCchhhcccccCCCC---CCEEEeCCccCCcCCC
Confidence 36899999999999999999998877543221 247899999999999999998865 3578999999999985
Q ss_pred ccCCCcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhhcccccCC
Q 029834 76 IEDDGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATHTKGALAH 155 (187)
Q Consensus 76 ~~~~~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~~~~~~~~ 155 (187)
+|.++|+++|+++|||||++||+||. +|+++|+++|| +|+|++|||++++++.
T Consensus 135 -------~L~~~L~~~gi~~lvi~Gv~T~~CV~---~Ta~dA~~~Gy-----~V~vv~Da~as~~~~~------------ 187 (287)
T 2fq1_A 135 -------PLEQMLKESGRNQLIITGVYAHIGCM---TTATDAFMRDI-----KPFMVADALADFSRDE------------ 187 (287)
T ss_dssp -------SHHHHHHHTTCCEEEEEEECTTTHHH---HHHHHHHHTTC-----EEEEEEEEEECSSHHH------------
T ss_pred -------cHHHHHHHCCCCEEEEEEeCcchHHH---HHHHHHHHCCC-----EEEEechhccCCCHHH------------
Confidence 99999999999999999999999999 99999999999 9999999999998753
Q ss_pred cHHHHHHHHHHHHHHcCcEeecccchhhh
Q 029834 156 PQEFMHHVGLYMAKERGAKIANQLSFSEQ 184 (187)
Q Consensus 156 ~~~~~h~~~l~~~~~~~~~v~~~~~~~~~ 184 (187)
|+.+|..|+.+|+.|+++++++..
T Consensus 188 -----h~~al~~m~~~~~~v~~t~~v~~~ 211 (287)
T 2fq1_A 188 -----HLMSLKYVAGRSGRVVMTEELLPA 211 (287)
T ss_dssp -----HHHHHHHHHHHTCEEECHHHHSSS
T ss_pred -----HHHHHHHHHHhCcEEeeHHHHHhC
Confidence 788999999999999999887654
No 23
>3txy_A Isochorismatase family protein family; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.70A {Burkholderia thailandensis} SCOP: c.33.1.0
Probab=99.97 E-value=2.8e-31 Score=213.80 Aligned_cols=148 Identities=22% Similarity=0.296 Sum_probs=130.5
Q ss_pred ChHHHHHHHHHHhhCCCcEEEEeeeCCCCCCC-------CCCCCCccCCCCCCccccccccccCCCceEEEeCCcccccc
Q 029834 1 MINESARLARAFCDRRLPVMAFLDTHHPNKPE-------DPYPTHCIAGTHESNLVPALQWIEKEPNVTIRRKDCFDGYF 73 (187)
Q Consensus 1 ~i~~i~~li~~~r~~g~pVv~t~d~h~~~~~~-------~~~p~hc~~gt~G~~l~~~L~~~~~~~~~~vi~K~~~saf~ 73 (187)
+++++++|+++||++|+||||+++.|.+++.+ .+|+.+|.. +.+++++|+|.+.+ .+.+|.|++||+|+
T Consensus 38 ~i~~i~~Li~~ar~~g~pVi~t~~~~~~d~~~~~~~~~~~~~~~~~~~-~~~~~i~~~L~~~~---~~~vi~K~~~saf~ 113 (199)
T 3txy_A 38 VVAKTAELANAFRARKLPVIFVHTSYQPDGAVALKVKTDVPPSPPNLD-PEWSAFAPALGVQP---LDVVVTKHQWGAFT 113 (199)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECCTTTSTTSCCCCCSSCCCCCCCC-HHHHSBCGGGCCCT---TSEEEEESSSSSST
T ss_pred HHHHHHHHHHHHHHcCCcEEEEEeeecCCccccccccccCCCcccCCC-CcHHhhChhhCCCC---CeEEEECCCcCccc
Confidence 47899999999999999999999888776443 246677764 45689999999865 35789999999999
Q ss_pred ccccCCCcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhhccccc
Q 029834 74 GSIEDDGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATHTKGAL 153 (187)
Q Consensus 74 ~~~~~~~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~~~~~~ 153 (187)
++ +|.++|+++|+++|+|||++|++||. +|+++|+++|| +|+|++|||++++++.
T Consensus 114 ~t-------~L~~~L~~~gi~~lvi~G~~t~~CV~---~Ta~~a~~~G~-----~v~v~~Da~~~~~~~~---------- 168 (199)
T 3txy_A 114 GT-------DLDVQLRRRGITDIVLTGIATNIGVE---STAREAYENNY-----NVVVVSDAVSTWSTDA---------- 168 (199)
T ss_dssp TS-------SHHHHHHHTTCCEEEEEEECTTTHHH---HHHHHHHHTTC-----EEEEEEEEEEBSCHHH----------
T ss_pred cC-------cHHHHHHhCCCCEEEEEeeccCHHHH---HHHHHHHHCCC-----EEEEecHhhcCCCHHH----------
Confidence 85 99999999999999999999999999 99999999999 9999999999998754
Q ss_pred CCcHHHHHHHHHHHHHHcCcEeecccchhhh
Q 029834 154 AHPQEFMHHVGLYMAKERGAKIANQLSFSEQ 184 (187)
Q Consensus 154 ~~~~~~~h~~~l~~~~~~~~~v~~~~~~~~~ 184 (187)
|+.+|..|..+|+.|+++++++..
T Consensus 169 -------~~~al~~~~~~~~~v~tt~~~l~~ 192 (199)
T 3txy_A 169 -------QTFALTQIFPKLGQVATAADVEAA 192 (199)
T ss_dssp -------HHHHHHHTHHHHSEEECHHHHHHH
T ss_pred -------HHHHHHHHHhhceEEeeHHHHHHH
Confidence 688999999999999999998764
No 24
>1yac_A Ycacgp, YCAC gene product; unknown bacterial hydrolase, three layer alpha-beta-alpha SA topology, ENTB homolog, cshase homolog; 1.80A {Escherichia coli} SCOP: c.33.1.3
Probab=99.94 E-value=7.4e-27 Score=189.20 Aligned_cols=134 Identities=23% Similarity=0.305 Sum_probs=114.4
Q ss_pred ChHHHHHHHHHHhhCCCcEEEEeeeCCCCCCCCCCCCCccCCCCCCccccccccccCCCceEEEeCC-ccccccccccCC
Q 029834 1 MINESARLARAFCDRRLPVMAFLDTHHPNKPEDPYPTHCIAGTHESNLVPALQWIEKEPNVTIRRKD-CFDGYFGSIEDD 79 (187)
Q Consensus 1 ~i~~i~~li~~~r~~g~pVv~t~d~h~~~~~~~~~p~hc~~gt~G~~l~~~L~~~~~~~~~~vi~K~-~~saf~~~~~~~ 79 (187)
+++++++|++.||+.|+||||+++ .++ .+|++++|+|.+... .+.++.|. +||+|+++
T Consensus 36 ~i~~i~~l~~~ar~~g~pVi~t~~--~~~-------------~~~~~~~~~l~~~~~--~~~vi~K~~~~saF~~t---- 94 (208)
T 1yac_A 36 FKNNVLALGDLAKYFNLPTILTTS--AET-------------GPNGPLVPELKAQFP--DAPYIARPGNINAWDNE---- 94 (208)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEE--STT-------------TTTCCBCHHHHHHCT--TSCEEEESSCSSGGGSH----
T ss_pred HHHHHHHHHHHHHHcCCcEEEEEe--cCC-------------CCCCcccHHHHhhCC--CCeEEeeCCccCCCCCc----
Confidence 378999999999999999999954 221 135678888876421 23466665 89999985
Q ss_pred CcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhhcccccCCcHHH
Q 029834 80 GSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATHTKGALAHPQEF 159 (187)
Q Consensus 80 ~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~~~~~~~~~~~~ 159 (187)
+|.++|+++|+++|+|||++||+||. +|+++|+++|| +|+|++|||++++++.
T Consensus 95 ---~L~~~L~~~gi~~lvi~Gv~T~~CV~---~Ta~dA~~~Gy-----~V~vv~Da~as~~~~~---------------- 147 (208)
T 1yac_A 95 ---DFVKAVKATGKKQLIIAGVVTEVCVA---FPALSAIEEGF-----DVFVVTDASGTFNEIT---------------- 147 (208)
T ss_dssp ---HHHHHHHHTTCSEEEEEEBSCCCCCH---HHHHHHHHTTC-----EEEEETTSCBCSSHHH----------------
T ss_pred ---hHHHHHHhcCCCEEEEEEeccchhHH---HHHHHHHHCCC-----EEEEECcccCCCCHHH----------------
Confidence 99999999999999999999999999 99999999999 9999999999998753
Q ss_pred HHHHHHHHHHHcCcEeecccchhh
Q 029834 160 MHHVGLYMAKERGAKIANQLSFSE 183 (187)
Q Consensus 160 ~h~~~l~~~~~~~~~v~~~~~~~~ 183 (187)
|+.+|..|+..|+.|+++++++.
T Consensus 148 -h~~al~~m~~~g~~v~~t~~~l~ 170 (208)
T 1yac_A 148 -RHSAWDRMSQAGAQLMTWFGVAC 170 (208)
T ss_dssp -HHHHHHHHHHHTCEEECHHHHHH
T ss_pred -HHHHHHHHHHcCCEEeeHHHHHH
Confidence 68899999999999999987764
No 25
>2b34_A F35G2.2, MAR1 ribonuclease; isochorismatase family, structural genomics, PSI, protein structure initiative; 2.14A {Caenorhabditis elegans}
Probab=99.93 E-value=2.2e-26 Score=185.32 Aligned_cols=131 Identities=23% Similarity=0.283 Sum_probs=113.3
Q ss_pred ChHHHHHHHHHHhhCCCcEEEEeeeCCCCCCCCCCCCCccCCCCCCccccccccccCCCceEEEeCCccccccccccCCC
Q 029834 1 MINESARLARAFCDRRLPVMAFLDTHHPNKPEDPYPTHCIAGTHESNLVPALQWIEKEPNVTIRRKDCFDGYFGSIEDDG 80 (187)
Q Consensus 1 ~i~~i~~li~~~r~~g~pVv~t~d~h~~~~~~~~~p~hc~~gt~G~~l~~~L~~~~~~~~~~vi~K~~~saf~~~~~~~~ 80 (187)
+++++++|++.||+.|+||||++++ ++ + .|++++++.++| + + .+.+|.|++||+|++
T Consensus 36 ~i~~i~~l~~~ar~~g~pVi~t~~~--~~--------~--~g~~~~el~~~l-~--~--~~~vi~K~~~saF~~------ 92 (199)
T 2b34_A 36 IITTSRRLIDAARILSIPTIVTEQY--PK--------G--LGHTVPTLKEGL-A--E--NTPIFDKTKFSMCIP------ 92 (199)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEES--HH--------H--HCCBCHHHHHHS-C--T--TCCEEEESBSSSCCG------
T ss_pred HHHHHHHHHHHHHHCCCcEEEEEec--CC--------C--CCCChHHHHhhC-C--C--CCeeeecCccCCccc------
Confidence 3789999999999999999999543 21 1 367788888877 2 1 146899999999987
Q ss_pred cchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhhcccccCCcHHHH
Q 029834 81 SNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATHTKGALAHPQEFM 160 (187)
Q Consensus 81 ~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~~~~~~~~~~~~~ 160 (187)
| |.++|++ +++|+|||++||+||. +|+++|+++|| +|+|++|||++++++.
T Consensus 93 -t-L~~~L~~--i~~lvi~G~~T~~CV~---~Ta~da~~~Gy-----~V~vv~Da~as~~~~~----------------- 143 (199)
T 2b34_A 93 -P-TEDTLKK--VQNVILVGIEAHVCVL---QTTYDLLERGL-----NVHVVVDAVSSRSHTD----------------- 143 (199)
T ss_dssp -G-GHHHHTT--CSEEEEEEECTTTHHH---HHHHHHHHTTC-----EEEEEEEEEECSSHHH-----------------
T ss_pred -H-HHHHHcC--CCEEEEEEEecCHHHH---HHHHHHHHCCC-----EEEEeCcccCCCCHHH-----------------
Confidence 5 9999998 9999999999999999 99999999999 9999999999998753
Q ss_pred HHHHHHHHHHcCcEeecccchhh
Q 029834 161 HHVGLYMAKERGAKIANQLSFSE 183 (187)
Q Consensus 161 h~~~l~~~~~~~~~v~~~~~~~~ 183 (187)
|+.+|..|+..|+.|+++++++.
T Consensus 144 h~~al~~m~~~g~~v~~t~~~l~ 166 (199)
T 2b34_A 144 RHFAFKQMEQAGAILTTSEATIL 166 (199)
T ss_dssp HHHHHHHHHHHTCEEECHHHHHH
T ss_pred HHHHHHHHHHCCCEEecHHHHHH
Confidence 68899999999999999987764
No 26
>1x9g_A Putative MAR1; structural genomics, protein structure initiative, SGPP, PSI structural genomics of pathogenic protozoa consortium; 2.41A {Leishmania donovani} SCOP: c.33.1.3 PDB: 1xn4_A
Probab=99.92 E-value=2.5e-25 Score=179.44 Aligned_cols=128 Identities=13% Similarity=0.134 Sum_probs=110.6
Q ss_pred ChHHHHHHHHHHhhCC--CcEEEEeeeCCCCCCCCCCCCCccCCCCCCccccccccccCCCc-eEEEeCCcccccccccc
Q 029834 1 MINESARLARAFCDRR--LPVMAFLDTHHPNKPEDPYPTHCIAGTHESNLVPALQWIEKEPN-VTIRRKDCFDGYFGSIE 77 (187)
Q Consensus 1 ~i~~i~~li~~~r~~g--~pVv~t~d~h~~~~~~~~~p~hc~~gt~G~~l~~~L~~~~~~~~-~~vi~K~~~saf~~~~~ 77 (187)
+++++++|++.||+.| +||||+++++ ++ .| ++.|+|. .+ + +.+|.|++||+|++
T Consensus 42 vi~~i~~ll~~ar~~g~~~pVi~t~~~~--~~-------------~G-~~~~eL~-~~---~~~~vi~K~~~SaF~~--- 98 (200)
T 1x9g_A 42 CVFVANRLARLHEVVPENTKYIVTEHYP--KG-------------LG-RIVPEIT-LP---KTAHLIEKTRFSCVVP--- 98 (200)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEEESC--SS-------------SC-CBCTTSC-CC---TTCEEEEESSSSSCCH---
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEeecC--Cc-------------cC-ccCHHHh-CC---CCCeEEeCCCCCCchh---
Confidence 3789999999999999 9999996542 11 12 5677887 43 3 57899999999986
Q ss_pred CCCcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhhcccccCCcH
Q 029834 78 DDGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATHTKGALAHPQ 157 (187)
Q Consensus 78 ~~~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~~~~~~~~~~ 157 (187)
+|.++|+ |+++|+|||++||+||. +|+++|+++|| +|+|++|||++++++.
T Consensus 99 -----~L~~~L~--gi~~lvi~Gv~T~~CV~---~Ta~dA~~~Gy-----~V~Vv~Da~as~~~~~-------------- 149 (200)
T 1x9g_A 99 -----QVEELLE--DVDNAVVFGIEGHACIL---QTVADLLDMNK-----RVFLPKDGLGSQKKTD-------------- 149 (200)
T ss_dssp -----HHHHTTT--TCCEEEEEEECTTTHHH---HHHHHHHHTTC-----EEEEEGGGEECSSHHH--------------
T ss_pred -----hHHHHhC--CCCEEEEEEEecCcHHH---HHHHHHHhCCC-----EEEEeCCCcCCCCHHH--------------
Confidence 7999998 99999999999999999 99999999999 9999999999998653
Q ss_pred HHHHHHHHHHHH--HcCcEeecccchhh
Q 029834 158 EFMHHVGLYMAK--ERGAKIANQLSFSE 183 (187)
Q Consensus 158 ~~~h~~~l~~~~--~~~~~v~~~~~~~~ 183 (187)
|+.+|..|+ ..|+.|+++++++.
T Consensus 150 ---h~~aL~~m~~~~~g~~v~tte~vl~ 174 (200)
T 1x9g_A 150 ---FKAAIKLMSSWGPNCEITTSESILL 174 (200)
T ss_dssp ---HHHHHHHHHTSCSSEEEECHHHHHH
T ss_pred ---HHHHHHHHHhhCCCeEEecHHHHHH
Confidence 688999999 99999999987644
No 27
>1yzv_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.00A {Trypanosoma cruzi}
Probab=99.92 E-value=1.1e-25 Score=182.06 Aligned_cols=129 Identities=13% Similarity=0.162 Sum_probs=111.6
Q ss_pred ChHHHHHHHHHHhhCCCc---EEEEeeeCCCCCCCCCCCCCccCCCCCCccccccccccCCCceEEEeCCcccccccccc
Q 029834 1 MINESARLARAFCDRRLP---VMAFLDTHHPNKPEDPYPTHCIAGTHESNLVPALQWIEKEPNVTIRRKDCFDGYFGSIE 77 (187)
Q Consensus 1 ~i~~i~~li~~~r~~g~p---Vv~t~d~h~~~~~~~~~p~hc~~gt~G~~l~~~L~~~~~~~~~~vi~K~~~saf~~~~~ 77 (187)
+++++++|++.||+.|+| ||||.+++. + .| .++++|.+.+ .+.+|.|++||+|++
T Consensus 42 vi~~i~~Ll~~ar~~g~p~~~Vi~t~~~~~-~--------------~G-~~~~eL~~~~---~d~vi~K~~~SaF~~--- 99 (204)
T 1yzv_A 42 CVFVANRFAGLHTALGTAHSVYIVTEQYPK-G--------------LG-ATSADIRLPP---DAHVFSKKRFAMLVP--- 99 (204)
T ss_dssp HHHHHHHHHHHHHHHCTTTEEEEEEEESHH-H--------------HC-SBCTTSCCCT---TCEEEEESSSSSCCT---
T ss_pred HHHHHHHHHHHHHHcCCCcceEEEEEecCC-c--------------CC-CChHHhcCCC---CCEEEECCcCCCchh---
Confidence 378999999999999999 999944321 1 02 2678887764 357999999999986
Q ss_pred CCCcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhhcccccCCcH
Q 029834 78 DDGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATHTKGALAHPQ 157 (187)
Q Consensus 78 ~~~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~~~~~~~~~~ 157 (187)
+|.++|+++|+++|+|||++|++||. +|+++|+++|| +|+|++|||++++++.
T Consensus 100 -----~L~~~L~~~gi~~lvi~Gv~T~~CV~---~Ta~dA~~~Gy-----~V~vv~Da~as~~~~~-------------- 152 (204)
T 1yzv_A 100 -----QVMPLVDLPEVEQVVLWGFETHVCIL---QTAAALLDMKK-----KVVIAVDGCGSQSQGD-------------- 152 (204)
T ss_dssp -----TTHHHHSSTTEEEEEEEEECTTTHHH---HHHHHHHHTTC-----EEEEEEEEEECSSHHH--------------
T ss_pred -----HHHHHHHhCCCCEEEEEEeccCHHHH---HHHHHHHHCCC-----EEEEECCccCCCCHHH--------------
Confidence 79999999999999999999999999 99999999999 9999999999998753
Q ss_pred HHHHHHHHHHHH---HcCcEeecccch
Q 029834 158 EFMHHVGLYMAK---ERGAKIANQLSF 181 (187)
Q Consensus 158 ~~~h~~~l~~~~---~~~~~v~~~~~~ 181 (187)
|+.+|..|+ ..|+.|.+++++
T Consensus 153 ---h~~aL~~m~~~~~~g~~v~t~e~v 176 (204)
T 1yzv_A 153 ---HCTAIQLMQSWSGDGCYISTSESI 176 (204)
T ss_dssp ---HHHHHHHHHTTGGGTEEEECHHHH
T ss_pred ---HHHHHHHHHHHhcCCeEEeCHHHH
Confidence 688999999 899999988764
No 28
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=56.56 E-value=13 Score=30.79 Aligned_cols=68 Identities=16% Similarity=0.163 Sum_probs=42.1
Q ss_pred EEEeCCc-cc-cc-cccccCCCcchHHHHHHhCCCcEEEEee-eecCceeccchhhHHHHHHcCCCCCcceEEEeCCccc
Q 029834 62 TIRRKDC-FD-GY-FGSIEDDGSNVFVDWVKNHQIRKLVVVG-VCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACA 137 (187)
Q Consensus 62 ~vi~K~~-~s-af-~~~~~~~~~t~L~~~L~~~gi~~lii~G-v~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~ 137 (187)
.++-|.. ++ .+ .+++++.+...+...+.++|.++|+-+| -..|.|+- .+.-+..+|+ +++++.....
T Consensus 33 ~i~~K~E~~n~p~~~Gs~K~R~a~~~l~~a~~~g~~~vv~~G~ssGN~g~a----lA~~a~~~G~-----~~~iv~p~~~ 103 (341)
T 1f2d_A 33 NVYAKREDCNSGLAFGGNKLRKLEYIVPDIVEGDYTHLVSIGGRQSNQTRM----VAALAAKLGK-----KCVLIQEDWV 103 (341)
T ss_dssp EEEEEEGGGSCSSTTCCHHHHHHTTTHHHHHHSCCSEEEEEEETTCHHHHH----HHHHHHHHTC-----EEEEEEECCS
T ss_pred eEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCCCEEEEcCCcchHHHHH----HHHHHHHhCC-----ceEEEeccCC
Confidence 3555642 33 31 4555443333344444567888888665 55566665 8888999999 8888776655
Q ss_pred c
Q 029834 138 T 138 (187)
Q Consensus 138 s 138 (187)
+
T Consensus 104 ~ 104 (341)
T 1f2d_A 104 P 104 (341)
T ss_dssp C
T ss_pred C
Confidence 4
No 29
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=54.93 E-value=14 Score=30.79 Aligned_cols=65 Identities=15% Similarity=0.146 Sum_probs=40.3
Q ss_pred EEEeCCccccccccccCCCcchHHHHHHhCCC----cEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCc
Q 029834 62 TIRRKDCFDGYFGSIEDDGSNVFVDWVKNHQI----RKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAA 135 (187)
Q Consensus 62 ~vi~K~~~saf~~~~~~~~~t~L~~~L~~~gi----~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da 135 (187)
.++-|..+---.+++++.+...+...+.++|. ++++|+.-..|.+.- ++.-+..+|+ +++|+...
T Consensus 36 ~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~l~~g~~vvv~aSsGN~g~a----lA~aa~~~G~-----~~~iv~p~ 104 (334)
T 3tbh_A 36 KVVLKMECENPMASVKDRLGFAIYDKAEKEGKLIPGKSIVVESSSGNTGVS----LAHLGAIRGY-----KVIITMPE 104 (334)
T ss_dssp EEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHH----HHHHHHHHTC-----EEEEEEET
T ss_pred EEEEEeCCCCCccCcHHHHHHHHHHHHHHcCCCCCCCeEEEEeCCCHHHHH----HHHHHHHhCC-----CEEEEECC
Confidence 45556432222355554433334444556776 776676667888865 7888888999 88877644
No 30
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=51.66 E-value=17 Score=30.17 Aligned_cols=43 Identities=12% Similarity=0.078 Sum_probs=33.5
Q ss_pred HHHhCCCcEEEEee-eecCceeccchhhHHHHHHcCCCCCcceEEEeCCcccc
Q 029834 87 WVKNHQIRKLVVVG-VCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACAT 138 (187)
Q Consensus 87 ~L~~~gi~~lii~G-v~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s 138 (187)
..+++|.++|+-+| ...|.+.- .+.-+..+|+ +++++.....+
T Consensus 75 ~a~~~G~~~vv~~s~tsGN~g~a----lA~aa~~~G~-----~~~iv~p~~~~ 118 (342)
T 4d9b_A 75 DALREGADTLITAGAIQSNHVRQ----TAAVAAKLGL-----HCVALLENPIG 118 (342)
T ss_dssp HHHHTTCCEEEEEEETTCHHHHH----HHHHHHHHTC-----EEEEEEECTTC
T ss_pred HHHHcCCCEEEEcCCcccHHHHH----HHHHHHHhCC-----cEEEEEeCCCC
Confidence 33568999999888 57888876 7888999999 88888765544
No 31
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=51.00 E-value=28 Score=28.49 Aligned_cols=41 Identities=12% Similarity=0.285 Sum_probs=31.5
Q ss_pred HHhCCCcEEEEee-eecCceeccchhhHHHHHHcCCCCCcceEEEeCCccc
Q 029834 88 VKNHQIRKLVVVG-VCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACA 137 (187)
Q Consensus 88 L~~~gi~~lii~G-v~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~ 137 (187)
.+++|.++|+-+| -..|.+.- .+.-+..+|+ +++++.....
T Consensus 65 a~~~G~~~vv~~G~ssGN~g~a----lA~~a~~~G~-----~~~iv~p~~~ 106 (325)
T 1j0a_A 65 ALSKGADVVITVGAVHSNHAFV----TGLAAKKLGL-----DAILVLRGKE 106 (325)
T ss_dssp HHHTTCSEEEEECCTTCHHHHH----HHHHHHHTTC-----EEEEEEESCC
T ss_pred HHHcCCCEEEEcCCcchHHHHH----HHHHHHHhCC-----cEEEEECCCC
Confidence 3457889988885 77777776 8888899999 8887765544
No 32
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=46.54 E-value=44 Score=26.22 Aligned_cols=66 Identities=27% Similarity=0.247 Sum_probs=45.5
Q ss_pred HHHHhCCCcEEEEeeeecCceeccchhhHHHHHH--cCCCCCcceEEEeCCccccCCccchhhhhcccccCCcHHHHHHH
Q 029834 86 DWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARN--RGFLRPLEEVVVYSAACATFDIPTHVATHTKGALAHPQEFMHHV 163 (187)
Q Consensus 86 ~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~--~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~~~~~~~~~~~~~h~~ 163 (187)
++.++.||++|+|+-... .|++-+++ .|. ++++|+--.+-..+... .. -+.
T Consensus 37 era~e~~Ik~iVVAS~sG--------~TA~k~~e~~~~i-----~lVvVTh~~GF~~pg~~---------e~-----~~e 89 (201)
T 1vp8_A 37 ERAKELGIKHLVVASSYG--------DTAMKALEMAEGL-----EVVVVTYHTGFVREGEN---------TM-----PPE 89 (201)
T ss_dssp HHHHHHTCCEEEEECSSS--------HHHHHHHHHCTTC-----EEEEEECCTTSSSTTCC---------SS-----CHH
T ss_pred HHHHHcCCCEEEEEeCCC--------hHHHHHHHHhcCC-----eEEEEeCcCCCCCCCCC---------cC-----CHH
Confidence 355668999999987665 67776666 356 89999877664433221 11 234
Q ss_pred HHHHHHHcCcEeecc
Q 029834 164 GLYMAKERGAKIANQ 178 (187)
Q Consensus 164 ~l~~~~~~~~~v~~~ 178 (187)
....|+.+|++|.+.
T Consensus 90 ~~~~L~~~G~~V~t~ 104 (201)
T 1vp8_A 90 VEEELRKRGAKIVRQ 104 (201)
T ss_dssp HHHHHHHTTCEEEEC
T ss_pred HHHHHHhCCCEEEEE
Confidence 566899999999885
No 33
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=45.25 E-value=21 Score=29.95 Aligned_cols=64 Identities=14% Similarity=0.122 Sum_probs=39.8
Q ss_pred EEEeCCc-cccccccccCCCcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCcc
Q 029834 62 TIRRKDC-FDGYFGSIEDDGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAAC 136 (187)
Q Consensus 62 ~vi~K~~-~saf~~~~~~~~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~ 136 (187)
.++-|.. ++. .+++++.+...+...+.++|.++|+-++- .|.+.- .+.-+..+|+ +++++....
T Consensus 62 ~v~~K~E~~~p-tGSfK~Rga~~~i~~a~~~g~~~vv~aSs-GN~g~a----lA~aa~~~G~-----~~~iv~p~~ 126 (364)
T 4h27_A 62 SVYLKMDSAQP-SGSFKIRGIGHFCKRWAKQGCAHFVCSSS-GNAGMA----AAYAARQLGV-----PATIVVPGT 126 (364)
T ss_dssp EEEEEEGGGST-TSBTHHHHHHHHHHHHHHTTCCEEEECCS-SHHHHH----HHHHHHHHTC-----CEEEEEETT
T ss_pred EEEEEeCCCCC-CCCHHHHHHHHHHHHHHhcCCCEEEEeCC-ChHHHH----HHHHHHHhCC-----ceEEEECCC
Confidence 4555643 233 45555443333444455678888776664 888854 7888889999 777776543
No 34
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=45.21 E-value=17 Score=29.85 Aligned_cols=44 Identities=14% Similarity=0.137 Sum_probs=30.9
Q ss_pred HHHHhCCCcEEEEee-eecCceeccchhhHHHHHHcCCCCCcceEEEeCCcccc
Q 029834 86 DWVKNHQIRKLVVVG-VCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACAT 138 (187)
Q Consensus 86 ~~L~~~gi~~lii~G-v~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s 138 (187)
..+.++|.++|+-+| -..|.+.- .+.-+..+|+ +++++.....+
T Consensus 60 ~~a~~~g~~~vv~~GassGN~g~a----lA~~a~~~G~-----~~~iv~p~~~~ 104 (338)
T 1tzj_A 60 PEALAQGCDTLVSIGGIQSNQTRQ----VAAVAAHLGM-----KCVLVQENWVN 104 (338)
T ss_dssp HHHHHTTCCEEEEEEETTCHHHHH----HHHHHHHHTC-----EEEEEEECCSS
T ss_pred HHHHHcCCCEEEEcCCchhHHHHH----HHHHHHHhCC-----ceEEEecCCCC
Confidence 334467888888765 55566665 7788889999 88877765543
No 35
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=41.12 E-value=43 Score=27.83 Aligned_cols=85 Identities=11% Similarity=0.173 Sum_probs=52.4
Q ss_pred eEEEeCCc-cccccccccCCCcchHHHHHHhCCC----cEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCc
Q 029834 61 VTIRRKDC-FDGYFGSIEDDGSNVFVDWVKNHQI----RKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAA 135 (187)
Q Consensus 61 ~~vi~K~~-~saf~~~~~~~~~t~L~~~L~~~gi----~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da 135 (187)
..++-|.. ++. .+++++.+...+...+.++|. ++.+|+.=+.|..+- .+.-+..+|+ +++|+...
T Consensus 50 ~~IylK~E~lnp-tGSfK~RgA~~~i~~a~~~g~l~~g~~~Vv~aSsGN~g~a----lA~~aa~~G~-----~~~IvmP~ 119 (344)
T 3vc3_A 50 AYVAVKQEMMQP-TASIADRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGIS----MAFMAAMKGY-----KMVLTMPS 119 (344)
T ss_dssp SEEEEEEGGGST-TSBTTHHHHHHHHHHHHHTTCCCTTTCEEEEECSSHHHHH----HHHHHHHHTC-----EEEEEEET
T ss_pred CEEEEEecCCCC-CCCcHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCcHHHHH----HHHHHHHcCC-----cEEEEECC
Confidence 34666753 333 456665544444455555554 445666667777765 7888888999 88888755
Q ss_pred cccCCccchhhhhcccccCCcHHHHHHHHHHHHHHcCcEeecc
Q 029834 136 CATFDIPTHVATHTKGALAHPQEFMHHVGLYMAKERGAKIANQ 178 (187)
Q Consensus 136 ~~s~~~~~~~a~~~~~~~~~~~~~~h~~~l~~~~~~~~~v~~~ 178 (187)
..+. .-+..|+..|++|+-.
T Consensus 120 ~~~~-----------------------~k~~~~~~~GA~Vv~v 139 (344)
T 3vc3_A 120 YTSL-----------------------ERRVTMRAFGAELILT 139 (344)
T ss_dssp TSCH-----------------------HHHHHHHHTTCEEEEE
T ss_pred CChH-----------------------HHHHHHHHcCCEEEEE
Confidence 3221 1234788888888753
No 36
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=40.27 E-value=48 Score=26.79 Aligned_cols=64 Identities=13% Similarity=0.096 Sum_probs=37.3
Q ss_pred EEEeCCc-cccccccccCCCcchHHHHHHhCCC----cEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCcc
Q 029834 62 TIRRKDC-FDGYFGSIEDDGSNVFVDWVKNHQI----RKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAAC 136 (187)
Q Consensus 62 ~vi~K~~-~saf~~~~~~~~~t~L~~~L~~~gi----~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~ 136 (187)
.++-|.. ++. .+++++.+...+...+.++|. ++|+-++ ..|.+.- .+.-+..+|+ +++++....
T Consensus 26 ~v~~K~E~~~p-tGSfK~R~a~~~i~~a~~~g~~~~g~~vv~~s-sGN~g~a----~A~~a~~~G~-----~~~iv~p~~ 94 (303)
T 2v03_A 26 EVWLKLEGNNP-AGSVKDRAALSMIVEAEKRGEIKPGDVLIEAT-SGNTGIA----LAMIAALKGY-----RMKLLMPDN 94 (303)
T ss_dssp EEEEEEGGGST-TSBTHHHHHHHHHHHHHHTTCCCTTCEEEEEC-SSHHHHH----HHHHHHHHTC-----EEEEEEETT
T ss_pred EEEEEeccCCC-CCCcHHHHHHHHHHHHHHcCCCCCCCEEEEEC-CcHHHHH----HHHHHHHcCC-----cEEEEECCC
Confidence 3444532 332 455554433334444445565 5555554 6777776 6777888999 888776643
No 37
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=39.49 E-value=31 Score=28.08 Aligned_cols=54 Identities=11% Similarity=0.086 Sum_probs=33.1
Q ss_pred cccccCCCcchHHHHHHhCCC----cEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCcc
Q 029834 73 FGSIEDDGSNVFVDWVKNHQI----RKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAAC 136 (187)
Q Consensus 73 ~~~~~~~~~t~L~~~L~~~gi----~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~ 136 (187)
.+++++.+...+...+.++|. ++|+ +.-..|.+.- .+.-+..+|+ +++++....
T Consensus 38 tGSfK~R~a~~~i~~a~~~g~~~~~~~vv-~~ssGN~g~a----~A~~a~~~G~-----~~~iv~p~~ 95 (316)
T 1y7l_A 38 SYSVKCRIGANMVWQAEKDGTLTKGKEIV-DATSGNTGIA----LAYVAAARGY-----KITLTMPET 95 (316)
T ss_dssp GGBTHHHHHHHHHHHHHHTTSSCTTCEEE-ESCCSHHHHH----HHHHHHHHTC-----CEEEEEETT
T ss_pred CCChHHHHHHHHHHHHHHcCCCCCCCEEE-EeCCcHHHHH----HHHHHHHcCC-----cEEEEECCC
Confidence 455555443344444455565 4444 4447888776 7777888999 777776543
No 38
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=38.59 E-value=17 Score=31.23 Aligned_cols=19 Identities=11% Similarity=0.387 Sum_probs=13.7
Q ss_pred HHHHHHhCCCcEEEEe--eee
Q 029834 84 FVDWVKNHQIRKLVVV--GVC 102 (187)
Q Consensus 84 L~~~L~~~gi~~lii~--Gv~ 102 (187)
-.+.+++.|.++|+|| |..
T Consensus 268 Ave~i~~~Gn~~i~L~~rG~s 288 (385)
T 3nvt_A 268 AAEYIMSQGNGKIILCERGIR 288 (385)
T ss_dssp HHHHHHTTTCCCEEEEECCBC
T ss_pred HHHHHHHcCCCeEEEEECCCC
Confidence 3356777888889888 555
No 39
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=37.71 E-value=43 Score=27.21 Aligned_cols=54 Identities=19% Similarity=0.233 Sum_probs=34.6
Q ss_pred cccccCCCcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCcc
Q 029834 73 FGSIEDDGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAAC 136 (187)
Q Consensus 73 ~~~~~~~~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~ 136 (187)
.+++++.+...+...+.++|.++|+-++ ..|.+.- .+.-+..+|+ +++++....
T Consensus 34 tgS~K~R~a~~~l~~a~~~g~~~vv~~s-sGN~g~a----lA~~a~~~G~-----~~~i~~p~~ 87 (318)
T 2rkb_A 34 SGSFKIRGIGHFCQEMAKKGCRHLVCSS-GGNAGIA----AAYAARKLGI-----PATIVLPES 87 (318)
T ss_dssp TSBTTHHHHHHHHHHHHHTTCCEEEECC-CSHHHHH----HHHHHHHHTC-----CEEEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHcCCCEEEEEC-CchHHHH----HHHHHHHcCC-----CEEEEECCC
Confidence 3555554333344444556777776665 4777776 6777888999 788776654
No 40
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=37.38 E-value=45 Score=27.35 Aligned_cols=65 Identities=14% Similarity=0.170 Sum_probs=39.1
Q ss_pred EEEeCCccccccccccCCCcchHHHHHHhCCC----cEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCcc
Q 029834 62 TIRRKDCFDGYFGSIEDDGSNVFVDWVKNHQI----RKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAAC 136 (187)
Q Consensus 62 ~vi~K~~~saf~~~~~~~~~t~L~~~L~~~gi----~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~ 136 (187)
.++-|..+--..+++++.+...+...+.+.|. ++ +|+.-..|.+.- .+.-+..+|+ +++++....
T Consensus 38 ~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~l~~~~~-vv~aSsGN~g~a----lA~aa~~~G~-----~~~iv~p~~ 106 (325)
T 3dwg_A 38 RLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGAT-ILEPTSGNTGIS----LAMAARLKGY-----RLICVMPEN 106 (325)
T ss_dssp EEEEEETTSSTTSBTTHHHHHHHHHHHHHTTCCCTTCE-EEEECSSHHHHH----HHHHHHHHTC-----EEEEEEESS
T ss_pred EEEEEECCCCCCCChHHHHHHHHHHHHHHcCCCCCCCE-EEEeCCcHHHHH----HHHHHHHcCC-----cEEEEECCC
Confidence 45556432222455555443344444555665 45 555667888865 7888888999 888776543
No 41
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=37.34 E-value=20 Score=27.74 Aligned_cols=29 Identities=0% Similarity=-0.123 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHhhCCCcEEEEeeeCCCCC
Q 029834 2 INESARLARAFCDRRLPVMAFLDTHHPNK 30 (187)
Q Consensus 2 i~~i~~li~~~r~~g~pVv~t~d~h~~~~ 30 (187)
+.+..++++.+|+.|.|||...|.|.+.+
T Consensus 146 ~~~~~~il~l~k~~g~~ivisSDAh~~~~ 174 (212)
T 1v77_A 146 LRFMMKAWKLVEKYKVRRFLTSSAQEKWD 174 (212)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCSSGGG
T ss_pred HHHHHHHHHHHHhcCCCEEEeCCCCChhh
Confidence 34567899999999999999999998654
No 42
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=37.32 E-value=49 Score=27.82 Aligned_cols=63 Identities=14% Similarity=0.124 Sum_probs=38.4
Q ss_pred EEeCCc-cccccccccCCCcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCcc
Q 029834 63 IRRKDC-FDGYFGSIEDDGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAAC 136 (187)
Q Consensus 63 vi~K~~-~saf~~~~~~~~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~ 136 (187)
++-|.. ++. .+++++.+...+...+.+.|.++|+-++ ..|.+.- .+.-+..+|+ +++++....
T Consensus 63 i~~K~E~~~p-tGSfKdRga~~~l~~a~~~g~~~vv~aS-sGN~g~a----lA~aa~~~G~-----~~~iv~p~~ 126 (372)
T 1p5j_A 63 VYLKMDSAQP-SGSFKIRGIGHFCKRWAKQGCAHFVCSS-AGNAGMA----AAYAARQLGV-----PATIVVPGT 126 (372)
T ss_dssp EEEECGGGSG-GGBTTHHHHHHHHHHHHHTTCCEEEECC-SSHHHHH----HHHHHHHHTC-----CEEEEECTT
T ss_pred EEEEEcCCCC-CCChHHHHHHHHHHHHHHcCCCEEEEeC-CCHHHHH----HHHHHHHcCC-----cEEEEECCC
Confidence 444543 443 4666554433344444456766666654 4777776 6777888999 787776654
No 43
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=36.13 E-value=56 Score=28.38 Aligned_cols=66 Identities=15% Similarity=0.129 Sum_probs=39.1
Q ss_pred EEEeCCccccccccccCCCcchHHHHHHhCCC----cEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCcc
Q 029834 62 TIRRKDCFDGYFGSIEDDGSNVFVDWVKNHQI----RKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAAC 136 (187)
Q Consensus 62 ~vi~K~~~saf~~~~~~~~~t~L~~~L~~~gi----~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~ 136 (187)
.++-|..+--..+++++.+...+....+++|. .+.+|+.-..|.+.- ++.-+..+|+ +++++....
T Consensus 139 ~I~lK~E~lnptGSfKdRgA~~~i~~A~~~G~l~~g~~~VV~aSsGNhG~A----lA~aAa~~Gl-----~~~IvmP~~ 208 (430)
T 4aec_A 139 NIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIG----LAFIAASRGY-----RLILTMPAS 208 (430)
T ss_dssp EEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHH----HHHHHHHHTC-----EEEEEEETT
T ss_pred eEEEEECCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCcEEEEECCCHHHHH----HHHHHHHhCC-----EEEEEEcCC
Confidence 45556432222355555433333344455776 144555557888877 7888889999 888776543
No 44
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=33.37 E-value=53 Score=27.14 Aligned_cols=63 Identities=16% Similarity=0.158 Sum_probs=38.8
Q ss_pred EEeCC-ccccccccccCCCcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCcc
Q 029834 63 IRRKD-CFDGYFGSIEDDGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAAC 136 (187)
Q Consensus 63 vi~K~-~~saf~~~~~~~~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~ 136 (187)
++-|. .++. .+++++.+...+...+.++|.++|+. .-..|.+.- .+.-+..+|+ +++++....
T Consensus 49 i~~K~E~~~p-tGS~KdR~a~~~l~~a~~~g~~~vv~-~SsGN~g~a----lA~~a~~~G~-----~~~i~~p~~ 112 (352)
T 2zsj_A 49 IYLKYEGLNP-TGSFKDRGMTLAISKAVEAGKRAVIC-ASTGNTSAS----AAAYAARAGL-----RAYVLLPKG 112 (352)
T ss_dssp EEEEEGGGST-TSBTTHHHHHHHHHHHHHTTCCEEEE-CCSSHHHHH----HHHHHHHHTC-----EEEEEEEGG
T ss_pred EEEEECCCCC-CccHHHHHHHHHHHHHHhcCCCEEEE-eCCchHHHH----HHHHHHhcCC-----cEEEEECCC
Confidence 44453 3344 45555544334444445677766554 578888865 7788888999 877776543
No 45
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=33.25 E-value=45 Score=26.95 Aligned_cols=54 Identities=15% Similarity=0.206 Sum_probs=34.0
Q ss_pred cccccCCCcchHHHHHHhCCC--cEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCcc
Q 029834 73 FGSIEDDGSNVFVDWVKNHQI--RKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAAC 136 (187)
Q Consensus 73 ~~~~~~~~~t~L~~~L~~~gi--~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~ 136 (187)
.+++++.+...+...+.++|. +. +|+.-..|.+.- .+.-+..+|+ +++++....
T Consensus 43 tGSfK~R~a~~~l~~a~~~g~~~~~-vv~aSsGN~g~a----~A~aa~~~G~-----~~~iv~p~~ 98 (303)
T 1o58_A 43 GGSVKDRPALFMILDAEKRGLLKNG-IVEPTSGNMGIA----IAMIGAKRGH-----RVILTMPET 98 (303)
T ss_dssp TSBTTHHHHHHHHHHHHHTTCCTTC-EEEECSSHHHHH----HHHHHHHHTC-----CEEEEEETT
T ss_pred CCChHHHHHHHHHHHHHHcCCCCCC-EEEECchHHHHH----HHHHHHHcCC-----cEEEEECCC
Confidence 455555443344444445554 44 667777888876 7777888999 777766543
No 46
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=32.82 E-value=50 Score=26.91 Aligned_cols=65 Identities=11% Similarity=0.167 Sum_probs=38.9
Q ss_pred EEEeCCc-cccccccccCCCcchHHHHHHhCCCc----EEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCcc
Q 029834 62 TIRRKDC-FDGYFGSIEDDGSNVFVDWVKNHQIR----KLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAAC 136 (187)
Q Consensus 62 ~vi~K~~-~saf~~~~~~~~~t~L~~~L~~~gi~----~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~ 136 (187)
.++-|.. ++. .+++++.+...+...++++|.- ..+|+.-..|.+.- .+.-+..+|+ +++++....
T Consensus 31 ~v~~K~E~~~p-tGSfK~R~a~~~l~~a~~~G~~~~~~~~vv~assGN~g~a----lA~aa~~~G~-----~~~iv~p~~ 100 (322)
T 1z7w_A 31 RVAAKLEMMEP-CSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVG----LAFTAAAKGY-----KLIITMPAS 100 (322)
T ss_dssp EEEEEEGGGST-TSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHH----HHHHHHHHTC-----EEEEEEETT
T ss_pred eEEEEecccCC-CCchHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCCHHHHH----HHHHHHHcCC-----CEEEEeCCC
Confidence 3455543 332 4555554333344445567761 34556667888876 6777889999 887776543
No 47
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=32.61 E-value=41 Score=29.59 Aligned_cols=65 Identities=12% Similarity=0.129 Sum_probs=39.5
Q ss_pred EEEeCCccccccccccCCCcchHHHHHHhCCC---cEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCc
Q 029834 62 TIRRKDCFDGYFGSIEDDGSNVFVDWVKNHQI---RKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAA 135 (187)
Q Consensus 62 ~vi~K~~~saf~~~~~~~~~t~L~~~L~~~gi---~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da 135 (187)
.++-|..+--..+++++.+...+....+++|. ...+|++-..|.+.- .+.-+..+|+ +++++...
T Consensus 78 ~i~~K~E~~~ptGS~K~R~a~~~i~~a~~~g~~~~g~~vv~~ssGN~g~a----~A~~a~~~G~-----~~~iv~p~ 145 (527)
T 3pc3_A 78 EMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLLKPGYTIIEPTSGNTGIG----LAMACAVKGY-----KCIIVMPE 145 (527)
T ss_dssp EEEEEEGGGSTTSBTTHHHHHHHHHHHHHHTCCCTTCEEEEECSSHHHHH----HHHHHHHHTC-----EEEEEEET
T ss_pred EEEEEeccCCCCCCHHHHHHHHHHHHHHHcCCCCCCCEEEEeCCCHHHHH----HHHHHHHhCC-----eEEEEEcC
Confidence 45556433222455554433333344445565 145677888888866 7888888999 88887754
No 48
>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A
Probab=31.26 E-value=37 Score=29.20 Aligned_cols=38 Identities=11% Similarity=0.183 Sum_probs=29.2
Q ss_pred HhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCc
Q 029834 89 KNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAA 135 (187)
Q Consensus 89 ~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da 135 (187)
++.|.+.+|++.=+.|.++- ++.-+..+|+ +++|+...
T Consensus 125 ~~~g~~~vI~~~ssGNhG~A----~A~aaa~~G~-----~~~I~mp~ 162 (422)
T 2o2e_A 125 RRMGKTRVIAETGAGQHGVA----TATACALLGL-----DCVIYMGG 162 (422)
T ss_dssp HHTTCCEEEEEESSSHHHHH----HHHHHHHHTC-----EEEEEEEH
T ss_pred HHcCCCeEEEecCccHHHHH----HHHHHHHcCC-----cEEEEeCC
Confidence 44688888876666888877 7888889999 88888754
No 49
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=31.11 E-value=70 Score=26.57 Aligned_cols=64 Identities=20% Similarity=0.189 Sum_probs=39.7
Q ss_pred EEEeCC-ccccccccccCCCcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCcc
Q 029834 62 TIRRKD-CFDGYFGSIEDDGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAAC 136 (187)
Q Consensus 62 ~vi~K~-~~saf~~~~~~~~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~ 136 (187)
.++-|. .++. .+++++.+...+...+.+.|.++|+.+ -..|.+.- .+.-+..+|+ +++++....
T Consensus 54 ~i~~K~E~~~p-tgSfKdR~a~~~l~~a~~~g~~~vv~a-SsGN~g~a----lA~~a~~~G~-----~~~i~~p~~ 118 (360)
T 2d1f_A 54 TIHLKVEGLNP-TGSFKDRGMTMAVTDALAHGQRAVLCA-STGNTSAS----AAAYAARAGI-----TCAVLIPQG 118 (360)
T ss_dssp EEEEEEGGGST-TSBTTHHHHHHHHHHHHHTTCSEEEEC-CSSHHHHH----HHHHHHHHTC-----EEEEEECSS
T ss_pred eEEEEECCCCC-CcCHHHHHHHHHHHHHHHCCCCEEEEe-CCcHHHHH----HHHHHHHcCC-----cEEEEEcCC
Confidence 355563 3443 455555443334444456777666554 78888854 7788888999 888776553
No 50
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=31.09 E-value=59 Score=26.85 Aligned_cols=63 Identities=16% Similarity=0.148 Sum_probs=39.2
Q ss_pred EEEeCCc-cccccccccCCCcchHHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCc
Q 029834 62 TIRRKDC-FDGYFGSIEDDGSNVFVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAA 135 (187)
Q Consensus 62 ~vi~K~~-~saf~~~~~~~~~t~L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da 135 (187)
.++-|.. ++. .+++++.+...+...+.++|.++|+. .-..|.+.- .+.-+..+|+ +++++...
T Consensus 46 ~v~~K~E~~~p-tgS~KdR~a~~~l~~a~~~g~~~vv~-~SsGN~g~a----lA~~a~~~G~-----~~~iv~p~ 109 (351)
T 3aey_A 46 RLYAKYEGLNP-TGSFKDRGMTLAVSKAVEGGAQAVAC-ASTGNTAAS----AAAYAARAGI-----LAIVVLPA 109 (351)
T ss_dssp EEEEEEGGGST-TSBTTHHHHHHHHHHHHHTTCSEEEE-SCSSHHHHH----HHHHHHHHTS-----EEEEEEET
T ss_pred eEEEEecCCCC-cccHHHHHHHHHHHHHHhcCCCEEEE-eCCCHHHHH----HHHHHHHcCC-----CEEEEECC
Confidence 4555643 344 45555544334444455677766555 477888854 7788888999 87776654
No 51
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=30.50 E-value=70 Score=25.75 Aligned_cols=65 Identities=12% Similarity=0.100 Sum_probs=39.3
Q ss_pred EEEeCCc-cccccccccCCCcchHHHHHHhCCC---cEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCcc
Q 029834 62 TIRRKDC-FDGYFGSIEDDGSNVFVDWVKNHQI---RKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAAC 136 (187)
Q Consensus 62 ~vi~K~~-~saf~~~~~~~~~t~L~~~L~~~gi---~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~ 136 (187)
.++-|.. ++. .+++++.+...+...+.++|. ...+|++-..|.+.- .+.-+..+|+ +++++....
T Consensus 30 ~i~~K~E~~~p-tgSfK~R~a~~~l~~a~~~g~~~~g~~vv~assGN~g~a----~A~~a~~~G~-----~~~iv~p~~ 98 (308)
T 2egu_A 30 DVYLKLEFMNP-GSSVKDRIALAMIEAAEKAGKLKPGDTIVEPTSGNTGIG----LAMVAAAKGY-----KAVLVMPDT 98 (308)
T ss_dssp EEEEEEGGGST-TSBTHHHHHHHHHHHHHHTTCCCTTCEEEEECCHHHHHH----HHHHHHHHTC-----EEEEEEESC
T ss_pred EEEEEecccCC-CCChHHHHHHHHHHHHHHcCCCCCCCEEEEeCCCHHHHH----HHHHHHHcCC-----CEEEEECCC
Confidence 3445532 333 355554433334344444554 146777888888887 6777788999 888776543
No 52
>3h7i_A Ribonuclease H, RNAse H; BPT4 RNAse H, 5'-3' exonuclease, hydrolase, endonuclease; 1.50A {Enterobacteria phage T4} PDB: 2ihn_A 3h8w_A 3h8j_A 1tfr_A 3h8s_A
Probab=30.41 E-value=20 Score=29.97 Aligned_cols=42 Identities=5% Similarity=-0.049 Sum_probs=36.5
Q ss_pred HHHHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeC
Q 029834 84 FVDWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYS 133 (187)
Q Consensus 84 L~~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~ 133 (187)
+.+.|+..|+..+.+-|...|-++- +-++.+...|+ +|++++
T Consensus 112 ike~l~a~gi~~l~~~G~EADDiIg---TLA~~a~~~g~-----~V~IvS 153 (305)
T 3h7i_A 112 IDELKAYMPYIVMDIDKYEANDHIA---VLVKKFSLEGH-----KILIIS 153 (305)
T ss_dssp HHHHHHHSSSEEECCTTCCHHHHHH---HHHHHHHHTTC-----CEEEEC
T ss_pred HHHHHHHCCCCEEccCCccHHHHHH---HHHHHHHHCCC-----cEEEEe
Confidence 5567788999999999999999998 77888999999 888876
No 53
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=28.99 E-value=86 Score=25.16 Aligned_cols=65 Identities=20% Similarity=0.223 Sum_probs=38.8
Q ss_pred EEEeCCc-cccccccccCCCcchHHHHHHhCCC-c--E--EEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCc
Q 029834 62 TIRRKDC-FDGYFGSIEDDGSNVFVDWVKNHQI-R--K--LVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAA 135 (187)
Q Consensus 62 ~vi~K~~-~saf~~~~~~~~~t~L~~~L~~~gi-~--~--lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da 135 (187)
.++-|.. ++. .+++++.+...+...+.+.|. + + .+|+.-..|.+.- .+.-+..+|+ +++++...
T Consensus 25 ~v~~K~E~~~p-tGSfK~R~a~~~l~~a~~~g~~~~g~~~~vv~assGN~g~a----~A~~a~~~G~-----~~~i~~p~ 94 (304)
T 1ve1_A 25 EVWVKLEGLNP-GGSIKDRPAWYMIKDAEERGILRPGSGQVIVEPTSGNTGIG----LAMIAASRGY-----RLILTMPA 94 (304)
T ss_dssp EEEEEEGGGST-TSBTTHHHHHHHHHHHHHTTSCCTTSCCEEEESCCSHHHHH----HHHHHHHHTC-----EEEEEEET
T ss_pred EEEEEecccCC-CCcHHHHHHHHHHHHHHHcCCCCCCCccEEEEeCCcHHHHH----HHHHHHHcCC-----cEEEEeCC
Confidence 3445532 333 455555433334444445554 1 3 6677788888876 6777888999 88877654
Q ss_pred c
Q 029834 136 C 136 (187)
Q Consensus 136 ~ 136 (187)
.
T Consensus 95 ~ 95 (304)
T 1ve1_A 95 Q 95 (304)
T ss_dssp T
T ss_pred C
Confidence 3
No 54
>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B*
Probab=28.79 E-value=41 Score=28.15 Aligned_cols=38 Identities=21% Similarity=0.194 Sum_probs=28.2
Q ss_pred HhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCc
Q 029834 89 KNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAA 135 (187)
Q Consensus 89 ~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da 135 (187)
++.|.+.+++..-+.|.++- ++.-+..+|+ +++++...
T Consensus 94 ~~~g~~~vv~~~ssGN~g~a----~A~aa~~~G~-----~~~iv~p~ 131 (388)
T 1v8z_A 94 KFMGKTRLIAETGAGQHGVA----TAMAGALLGM-----KVDIYMGA 131 (388)
T ss_dssp HHTTCCEEEEEESSSHHHHH----HHHHHHHTTC-----EEEEEEEH
T ss_pred HHcCCCEEEEecCchHHHHH----HHHHHHHcCC-----cEEEEEcC
Confidence 45788887775556677776 7778889999 88887754
No 55
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=27.54 E-value=75 Score=26.13 Aligned_cols=86 Identities=12% Similarity=0.017 Sum_probs=44.1
Q ss_pred HHHHHHHHHHhhCCCcEEEEeeeCCCCCCCC--CCCCCccCCCCCCc---cccccccccCCCceEEEeCCcccccccccc
Q 029834 3 NESARLARAFCDRRLPVMAFLDTHHPNKPED--PYPTHCIAGTHESN---LVPALQWIEKEPNVTIRRKDCFDGYFGSIE 77 (187)
Q Consensus 3 ~~i~~li~~~r~~g~pVv~t~d~h~~~~~~~--~~p~hc~~gt~G~~---l~~~L~~~~~~~~~~vi~K~~~saf~~~~~ 77 (187)
..+..|.+.+++.|+|++-. .|++...+. .+.+--..|+.... ++.++... +. ..++.++.+.....-
T Consensus 78 ~GL~~L~~~~~e~Glp~~Te--v~d~~~v~~l~~~vd~lqIgA~~~~n~~LLr~va~~-gk--PVilK~G~~~t~~ei-- 150 (285)
T 3sz8_A 78 EGLKIFAEVKARFGVPVITD--VHEAEQAAPVAEIADVLQVPAFLARQTDLVVAIAKA-GK--PVNVKKPQFMSPTQL-- 150 (285)
T ss_dssp HHHHHHHHHHHHHCCCEEEE--CCSGGGHHHHHTTCSEEEECGGGTTCHHHHHHHHHT-SS--CEEEECCTTSCGGGT--
T ss_pred HHHHHHHHHHHhcCCeEEEE--eCCHHHHHHHHHhCCEEEECccccCCHHHHHHHHcc-CC--cEEEeCCCCCCHHHH--
Confidence 34566777888999999977 555443220 11111122332222 33333222 22 244444433233221
Q ss_pred CCCcchHHHHHHhCCCcEEEEe
Q 029834 78 DDGSNVFVDWVKNHQIRKLVVV 99 (187)
Q Consensus 78 ~~~~t~L~~~L~~~gi~~lii~ 99 (187)
..-.+.+++.|.++|++|
T Consensus 151 ----~~ave~i~~~Gn~~i~L~ 168 (285)
T 3sz8_A 151 ----KHVVSKCGEVGNDRVMLC 168 (285)
T ss_dssp ----HHHHHHHHHTTCCCEEEE
T ss_pred ----HHHHHHHHHcCCCcEEEE
Confidence 234567888899999997
No 56
>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...
Probab=27.05 E-value=41 Score=28.41 Aligned_cols=39 Identities=15% Similarity=0.176 Sum_probs=28.5
Q ss_pred HHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCc
Q 029834 88 VKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAA 135 (187)
Q Consensus 88 L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da 135 (187)
.++.|.+++++..=+.|.++- ++.-+..+|+ +++|+...
T Consensus 97 a~~~g~~~vi~e~ssGNhg~a----~A~aa~~~G~-----~~~i~mp~ 135 (396)
T 1qop_B 97 AKRMGKSEIIAETGAGQHGVA----SALASALLGL-----KCRIYMGA 135 (396)
T ss_dssp HHHTTCCEEEEEESSSHHHHH----HHHHHHHHTC-----EEEEEEEH
T ss_pred HHHcCcCEEEEecCchHHHHH----HHHHHHHCCC-----cEEEEEcC
Confidence 345788887773445677776 7778888999 88888754
No 57
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=26.58 E-value=75 Score=25.62 Aligned_cols=64 Identities=14% Similarity=0.201 Sum_probs=39.2
Q ss_pred EEeCC-ccccccccccCCCcchHHHHHHhCCC---cEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCcc
Q 029834 63 IRRKD-CFDGYFGSIEDDGSNVFVDWVKNHQI---RKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAAC 136 (187)
Q Consensus 63 vi~K~-~~saf~~~~~~~~~t~L~~~L~~~gi---~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~ 136 (187)
++-|. .++. .+++++.+...+...+.+.|. ...+|++-..|.+.- .+.-+..+|+ +++++....
T Consensus 33 i~~K~E~~~p-tgSfK~R~a~~~l~~a~~~g~~~~g~~vv~assGN~g~a----lA~~a~~~G~-----~~~iv~p~~ 100 (313)
T 2q3b_A 33 IVAKLEFFNP-ANSVKDRIGVAMLQAAEQAGLIKPDTIILEPTSGNTGIA----LAMVCAARGY-----RCVLTMPET 100 (313)
T ss_dssp EEEEEGGGST-TSBTHHHHHHHHHHHHHHTTCCCTTCEEEEECSSHHHHH----HHHHHHHHTC-----EEEEEEETT
T ss_pred EEEEehhcCC-CCcHHHHHHHHHHHHHHHcCCCCCCCEEEEeCCCHHHHH----HHHHHHHcCC-----cEEEEECCC
Confidence 44453 2333 355554333334444445554 145777899998887 6777888999 888876644
No 58
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=25.75 E-value=64 Score=26.64 Aligned_cols=65 Identities=11% Similarity=0.019 Sum_probs=36.2
Q ss_pred EEEeCCccccccccccCCCcchHHHHHHhCCC----cEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCcc
Q 029834 62 TIRRKDCFDGYFGSIEDDGSNVFVDWVKNHQI----RKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAAC 136 (187)
Q Consensus 62 ~vi~K~~~saf~~~~~~~~~t~L~~~L~~~gi----~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~ 136 (187)
.++-|...--..+++++.+...+...+.+.|. ++| |+--..|.+.- .+.-+..+|+ +++++....
T Consensus 43 ~v~~K~E~~~ptGSfKdR~a~~~l~~a~~~g~~~~g~~v-v~aSsGN~g~a----lA~aa~~~G~-----~~~iv~p~~ 111 (343)
T 2pqm_A 43 RILVKLEYFNPMSSVKDRVGFNIVYQAIKDGRLKPGMEI-IESTSGNTGIA----LCQAGAVFGY-----RVNIAMPST 111 (343)
T ss_dssp EEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTSSCTTCEE-EEECSSHHHHH----HHHHHHHHTC-----CEEEEEETT
T ss_pred EEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCCCCEE-EEECCcHHHHH----HHHHHHHcCC-----CEEEEECCC
Confidence 45556432222455555433333344444454 444 44446777776 6777778999 777776543
No 59
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=24.88 E-value=1.6e+02 Score=23.02 Aligned_cols=67 Identities=13% Similarity=0.076 Sum_probs=45.2
Q ss_pred HHHHhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhhcccccCCcHHHHHHHHH
Q 029834 86 DWVKNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATHTKGALAHPQEFMHHVGL 165 (187)
Q Consensus 86 ~~L~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~~~~~~~~~~~~~h~~~l 165 (187)
++.++.||++|+|+-... .|++-+++. ++ . ++++|+--..-..+... .. -+...
T Consensus 45 era~e~~Ik~iVVASssG--------~TA~k~~e~-~~--~-~lVvVTh~~GF~~pg~~---------e~-----~~e~~ 98 (206)
T 1t57_A 45 ERADQLGIRNFVVASVSG--------ETALRLSEM-VE--G-NIVSVTHHAGFREKGQL---------EL-----EDEAR 98 (206)
T ss_dssp HHHHHHTCCEEEEECSSS--------HHHHHHHTT-CC--S-EEEEECCCTTSSSTTCC---------SS-----CHHHH
T ss_pred HHHHHcCCCEEEEEeCCC--------HHHHHHHHH-cc--C-CEEEEeCcCCCCCCCCC---------cC-----CHHHH
Confidence 355668999999987665 788888873 32 2 78888876664333221 11 23455
Q ss_pred HHHHHcCcEeecc
Q 029834 166 YMAKERGAKIANQ 178 (187)
Q Consensus 166 ~~~~~~~~~v~~~ 178 (187)
..|+.+|++|.+.
T Consensus 99 ~~L~~~G~~V~t~ 111 (206)
T 1t57_A 99 DALLERGVNVYAG 111 (206)
T ss_dssp HHHHHHTCEEECC
T ss_pred HHHHhCCCEEEEe
Confidence 6899999999885
No 60
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=24.36 E-value=66 Score=26.29 Aligned_cols=23 Identities=22% Similarity=0.443 Sum_probs=20.1
Q ss_pred HHHHHHHHHHhhCCCcEEEEeee
Q 029834 3 NESARLARAFCDRRLPVMAFLDT 25 (187)
Q Consensus 3 ~~i~~li~~~r~~g~pVv~t~d~ 25 (187)
.++.++++.|.+.++|+|+..|.
T Consensus 143 ~K~~r~ie~A~~~~lPlI~l~ds 165 (285)
T 2f9i_B 143 EKICRIIDYCTENRLPFILFSAS 165 (285)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEEeC
Confidence 57899999999999999998654
No 61
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=24.00 E-value=46 Score=27.62 Aligned_cols=34 Identities=12% Similarity=0.088 Sum_probs=24.5
Q ss_pred CCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCc
Q 029834 92 QIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAA 135 (187)
Q Consensus 92 gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da 135 (187)
+.+.|+-+ -..|.+.- .+.-+..+|+ +++++...
T Consensus 75 ~~~~vv~~-SsGNhg~a----~A~aa~~~G~-----~~~iv~p~ 108 (346)
T 3l6b_A 75 KPKAVVTH-SSGNHGQA----LTYAAKLEGI-----PAYIVVPQ 108 (346)
T ss_dssp CCSCEEEE-CSSHHHHH----HHHHHHHTTC-----CEEEEEET
T ss_pred CCCEEEEe-CCCHHHHH----HHHHHHHhCC-----CEEEEECC
Confidence 55665544 47888865 7888889999 77777643
No 62
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=23.97 E-value=38 Score=27.37 Aligned_cols=35 Identities=14% Similarity=0.105 Sum_probs=25.8
Q ss_pred CCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCcc
Q 029834 92 QIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAAC 136 (187)
Q Consensus 92 gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~ 136 (187)
+.++|+-++ ..|.+.- .+.-+..+|+ +++++....
T Consensus 64 ~~~~vv~~s-sGN~g~a----lA~~a~~~G~-----~~~iv~p~~ 98 (311)
T 1ve5_A 64 NPKGLLAVS-SGNHAQG----VAYAAQVLGV-----KALVVMPED 98 (311)
T ss_dssp SCCCEEEEC-SSHHHHH----HHHHHHHHTC-----CEEEECCCC
T ss_pred CCCeEEEEC-CCcHHHH----HHHHHHHcCC-----CEEEEECCC
Confidence 556666665 7888776 6777788999 888877654
No 63
>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus}
Probab=23.20 E-value=38 Score=28.97 Aligned_cols=38 Identities=21% Similarity=0.191 Sum_probs=28.2
Q ss_pred HhCCCcEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCc
Q 029834 89 KNHQIRKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAA 135 (187)
Q Consensus 89 ~~~gi~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da 135 (187)
++.|.+.+|++.=+.|.++- ++.-+..+|+ +++|+...
T Consensus 121 ~~~g~~~vI~~~ssGNhg~a----vA~aaa~~Gi-----~~~I~mp~ 158 (418)
T 1x1q_A 121 RRMGKRRVIAETGAGQHGVS----VATVAALFGL-----ECVVYMGE 158 (418)
T ss_dssp HHHTCCEEEEECSSSHHHHH----HHHHHHHHTC-----EEEEEEEH
T ss_pred HHcCCCEEEEecCchHHHHH----HHHHHHHcCC-----CEEEEECC
Confidence 34577778775556777776 7888888999 88887754
No 64
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=22.90 E-value=38 Score=28.16 Aligned_cols=88 Identities=7% Similarity=-0.020 Sum_probs=43.7
Q ss_pred HHHHHHHHHHhhCCCcEEEEeeeCCCCCCC--CCCCCCccCCCCCCccccccccccCCCceEEEeCCccc-cccccccCC
Q 029834 3 NESARLARAFCDRRLPVMAFLDTHHPNKPE--DPYPTHCIAGTHESNLVPALQWIEKEPNVTIRRKDCFD-GYFGSIEDD 79 (187)
Q Consensus 3 ~~i~~li~~~r~~g~pVv~t~d~h~~~~~~--~~~p~hc~~gt~G~~l~~~L~~~~~~~~~~vi~K~~~s-af~~~~~~~ 79 (187)
..+..|.+.+++.|+|++-. .+++...+ ..+.+--..|+....-.+-|+...+. .-.++-|+..+ ....-
T Consensus 99 ~GL~~L~~~~~e~GLpv~Te--v~D~~~v~~l~~~vd~lkIgA~~~~n~~LLr~va~~-gkPVilK~Gms~t~~ei---- 171 (298)
T 3fs2_A 99 KALEVFSDLKKEYGFPVLTD--IHTEEQCAAVAPVVDVLQIPAFLCRQTDLLIAAART-GRVVNVKKGQFLAPWDM---- 171 (298)
T ss_dssp HHHHHHHHHHHHHCCCEEEE--CCSHHHHHHHTTTCSEEEECGGGTTCHHHHHHHHHT-TSEEEEECCTTCCGGGH----
T ss_pred HHHHHHHHHHHhcCCeEEEE--eCCHHHHHHHHhhCCEEEECccccCCHHHHHHHHcc-CCcEEEeCCCCCCHHHH----
Confidence 34566777888999999977 55433221 01111122233222333323222111 12344454432 33221
Q ss_pred CcchHHHHHHhCCCcEEEEe
Q 029834 80 GSNVFVDWVKNHQIRKLVVV 99 (187)
Q Consensus 80 ~~t~L~~~L~~~gi~~lii~ 99 (187)
..-.+.+++.|.++|++|
T Consensus 172 --~~ave~i~~~Gn~~iiL~ 189 (298)
T 3fs2_A 172 --KNVLAKITESGNPNVLAT 189 (298)
T ss_dssp --HHHHHHHHTTTCCCEEEE
T ss_pred --HHHHHHHHHcCCCeEEEE
Confidence 134467788899999997
No 65
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1
Probab=22.59 E-value=62 Score=27.53 Aligned_cols=50 Identities=24% Similarity=0.325 Sum_probs=37.1
Q ss_pred EEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCccccCCccchhhhhcccccCCcHHHHHHHHHHHHHHcCcE
Q 029834 95 KLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAACATFDIPTHVATHTKGALAHPQEFMHHVGLYMAKERGAK 174 (187)
Q Consensus 95 ~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~~s~~~~~~~a~~~~~~~~~~~~~~h~~~l~~~~~~~~~ 174 (187)
+.|+++-+.|.|+- ++.-+..+|+ +++|+.....+ . ..+..|+..|++
T Consensus 146 ~~Iv~assGNhG~A----lA~aaa~~Gl-----~~~ivmp~~~~--~---------------------~k~~~~~~~GAe 193 (389)
T 1wkv_A 146 SLVADATSSNFGVA----LSAVARLYGY-----RARVYLPGAAE--E---------------------FGKLLPRLLGAQ 193 (389)
T ss_dssp CEEEEECCHHHHHH----HHHHHHHTTC-----EEEEEEETTSC--H---------------------HHHHHHHHTTCE
T ss_pred CEEEEECCcHHHHH----HHHHHHHcCC-----eEEEEECCCCC--H---------------------HHHHHHHHcCCE
Confidence 56678889999987 7888889999 88887765421 1 123478888888
Q ss_pred ee
Q 029834 175 IA 176 (187)
Q Consensus 175 v~ 176 (187)
|+
T Consensus 194 Vv 195 (389)
T 1wkv_A 194 VI 195 (389)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 66
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=22.05 E-value=84 Score=27.18 Aligned_cols=66 Identities=14% Similarity=0.120 Sum_probs=36.7
Q ss_pred EEEeCCccccccccccCCCcchHHHHHHhCCC---cEEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCcc
Q 029834 62 TIRRKDCFDGYFGSIEDDGSNVFVDWVKNHQI---RKLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAAC 136 (187)
Q Consensus 62 ~vi~K~~~saf~~~~~~~~~t~L~~~L~~~gi---~~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da~ 136 (187)
.++-|..+--..+++++.+...+....+++|. ...||+.-..|.++- .+.-+..+|+ +++|+....
T Consensus 126 ~v~lK~E~~nptGSfKdR~a~~~i~~a~~~G~l~~g~tVV~aSsGN~G~A----lA~aaa~~Gi-----~~~IvmP~~ 194 (435)
T 1jbq_A 126 ELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDTIIEPTSGNTGIG----LALAAAVRGY-----RCIIVMPEK 194 (435)
T ss_dssp EEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTCSCTTCEEEEECSSHHHHH----HHHHHHHHTC-----EEEEEECSC
T ss_pred eEEEEECCCCCcCCHHHHHHHHHHHHHHHcCCCCCCCEEEEeCCCHHHHH----HHHHHHHcCC-----eEEEEeCCC
Confidence 34455432223455544332233333334453 235665566677776 6777888999 888877654
No 67
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=21.19 E-value=1e+02 Score=26.54 Aligned_cols=32 Identities=22% Similarity=0.285 Sum_probs=26.5
Q ss_pred EEEEeeeecCceeccchhhHHHHHHcCCCCCcceEEEeCCc
Q 029834 95 KLVVVGVCTDICVLDFVCSTMSARNRGFLRPLEEVVVYSAA 135 (187)
Q Consensus 95 ~lii~Gv~Td~CV~~~~~Ta~~a~~~G~~~~~~~V~Vv~Da 135 (187)
..|+++-+.|.+.- .+.-+..+|+ +++|+...
T Consensus 161 ~~vv~aSsGNhg~a----vA~~aa~~G~-----~~~Ivmp~ 192 (442)
T 3ss7_X 161 YSIAVGSTGNLGLS----IGIMSARIGF-----KVTVHMSA 192 (442)
T ss_dssp SEEEEECSSHHHHH----HHHHHHHHTC-----EEEEEEET
T ss_pred cEEEEECCCHHHHH----HHHHHHHhCC-----cEEEEECC
Confidence 47888889999987 7888888999 88887765
No 68
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=20.41 E-value=62 Score=25.49 Aligned_cols=17 Identities=18% Similarity=0.200 Sum_probs=9.1
Q ss_pred hHHHHHHhCCCcEEEEee
Q 029834 83 VFVDWVKNHQIRKLVVVG 100 (187)
Q Consensus 83 ~L~~~L~~~gi~~lii~G 100 (187)
.+.+.|.++|.+ |++++
T Consensus 36 aia~~La~~G~~-V~~~~ 52 (272)
T 2nwq_A 36 ACARRFAEAGWS-LVLTG 52 (272)
T ss_dssp HHHHHHHHTTCE-EEEEE
T ss_pred HHHHHHHHCCCE-EEEEE
Confidence 566666666653 44443
No 69
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=20.40 E-value=1.1e+02 Score=22.30 Aligned_cols=20 Identities=10% Similarity=0.101 Sum_probs=17.6
Q ss_pred HHHHHHHHHHhhCCCcEEEE
Q 029834 3 NESARLARAFCDRRLPVMAF 22 (187)
Q Consensus 3 ~~i~~li~~~r~~g~pVv~t 22 (187)
+.+.++++.+|++|.++|.+
T Consensus 130 ~~~~~~~~~ak~~g~~vI~I 149 (198)
T 2xbl_A 130 PNILAAFREAKAKGMTCVGF 149 (198)
T ss_dssp HHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHCCCeEEEE
Confidence 56788999999999999987
Done!