Query 029836
Match_columns 187
No_of_seqs 167 out of 2679
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 06:36:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029836.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029836hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3r3h_A O-methyltransferase, SA 100.0 6.2E-34 2.1E-38 215.6 20.4 180 1-187 42-221 (242)
2 3dr5_A Putative O-methyltransf 100.0 7.9E-34 2.7E-38 212.3 20.5 173 2-185 36-212 (221)
3 3c3y_A Pfomt, O-methyltransfer 100.0 9.3E-33 3.2E-37 208.5 22.8 185 1-186 52-236 (237)
4 1sui_A Caffeoyl-COA O-methyltr 100.0 7.5E-33 2.6E-37 210.3 22.2 186 1-186 61-246 (247)
5 3tr6_A O-methyltransferase; ce 100.0 5.9E-32 2E-36 202.1 22.3 180 1-187 46-225 (225)
6 3ntv_A MW1564 protein; rossman 100.0 1.3E-31 4.6E-36 201.5 22.3 177 3-187 55-232 (232)
7 3cbg_A O-methyltransferase; cy 100.0 1.8E-31 6.2E-36 200.8 22.2 179 1-186 54-232 (232)
8 3duw_A OMT, O-methyltransferas 100.0 1.1E-30 3.9E-35 195.0 23.7 178 1-186 40-222 (223)
9 3tfw_A Putative O-methyltransf 100.0 8.4E-31 2.9E-35 199.1 23.3 177 1-187 45-226 (248)
10 2avd_A Catechol-O-methyltransf 100.0 2E-30 6.7E-35 194.3 22.9 179 1-186 51-229 (229)
11 3c3p_A Methyltransferase; NP_9 100.0 1.4E-29 4.8E-34 187.5 17.7 172 2-187 39-210 (210)
12 2hnk_A SAM-dependent O-methylt 100.0 2E-28 6.7E-33 184.9 22.9 180 1-186 42-231 (239)
13 3u81_A Catechol O-methyltransf 100.0 4.4E-28 1.5E-32 180.9 19.2 165 1-187 40-214 (221)
14 2gpy_A O-methyltransferase; st 99.9 2.5E-26 8.6E-31 172.5 18.1 178 2-186 37-214 (233)
15 3cvo_A Methyltransferase-like 99.8 2.3E-20 7.8E-25 136.5 13.7 127 1-135 14-159 (202)
16 2wk1_A NOVP; transferase, O-me 99.8 4.5E-20 1.5E-24 141.6 12.7 162 2-187 85-282 (282)
17 2o07_A Spermidine synthase; st 99.8 5.6E-19 1.9E-23 137.5 12.4 149 17-186 93-256 (304)
18 2b2c_A Spermidine synthase; be 99.8 9.8E-19 3.3E-23 136.7 13.3 150 17-186 106-269 (314)
19 2bm8_A Cephalosporin hydroxyla 99.8 1.1E-18 3.8E-23 131.3 10.6 116 5-131 67-188 (236)
20 3e05_A Precorrin-6Y C5,15-meth 99.8 1.3E-17 4.6E-22 122.3 14.0 119 4-131 25-143 (204)
21 3p9n_A Possible methyltransfer 99.8 5.9E-17 2E-21 117.6 16.8 107 18-132 43-155 (189)
22 3fpf_A Mtnas, putative unchara 99.8 7.1E-18 2.4E-22 129.9 12.4 107 14-131 117-223 (298)
23 1uir_A Polyamine aminopropyltr 99.8 1.5E-17 5E-22 130.1 14.0 151 16-185 74-241 (314)
24 3jwh_A HEN1; methyltransferase 99.8 1.1E-17 3.6E-22 124.0 12.1 168 4-179 14-194 (217)
25 3jwg_A HEN1, methyltransferase 99.8 2E-17 6.9E-22 122.5 13.5 168 4-179 14-194 (219)
26 3hm2_A Precorrin-6Y C5,15-meth 99.8 1.2E-17 4.1E-22 119.7 11.9 117 7-132 13-129 (178)
27 3njr_A Precorrin-6Y methylase; 99.7 5.2E-17 1.8E-21 119.5 14.8 116 4-131 40-155 (204)
28 1xj5_A Spermidine synthase 1; 99.7 3.2E-17 1.1E-21 129.1 14.2 112 17-134 118-240 (334)
29 1mjf_A Spermidine synthase; sp 99.7 4.3E-17 1.5E-21 125.7 14.5 148 16-186 72-239 (281)
30 4gek_A TRNA (CMO5U34)-methyltr 99.7 2.8E-17 9.5E-22 125.4 13.0 116 9-133 58-181 (261)
31 1iy9_A Spermidine synthase; ro 99.7 4.3E-17 1.5E-21 125.3 13.9 107 17-130 73-189 (275)
32 2esr_A Methyltransferase; stru 99.7 3.7E-17 1.2E-21 117.3 12.3 107 17-131 29-139 (177)
33 3orh_A Guanidinoacetate N-meth 99.7 1.8E-17 6E-22 124.7 10.8 109 18-135 59-175 (236)
34 1xdz_A Methyltransferase GIDB; 99.7 2.1E-16 7.1E-21 119.0 15.5 105 18-129 69-173 (240)
35 3dxy_A TRNA (guanine-N(7)-)-me 99.7 3E-16 1E-20 116.6 15.6 105 19-129 34-149 (218)
36 1nkv_A Hypothetical protein YJ 99.7 8.6E-17 3E-21 121.7 12.7 118 6-133 23-143 (256)
37 2ift_A Putative methylase HI07 99.7 1.1E-16 3.8E-21 117.5 12.7 108 18-132 52-165 (201)
38 3adn_A Spermidine synthase; am 99.7 7.9E-17 2.7E-21 124.8 12.5 106 17-129 81-197 (294)
39 3mti_A RRNA methylase; SAM-dep 99.7 5.6E-16 1.9E-20 111.8 16.1 112 9-130 10-135 (185)
40 1inl_A Spermidine synthase; be 99.7 1.6E-16 5.4E-21 123.3 13.8 106 17-129 88-204 (296)
41 2fhp_A Methylase, putative; al 99.7 3.2E-16 1.1E-20 113.0 14.3 109 18-131 43-155 (187)
42 1l3i_A Precorrin-6Y methyltran 99.7 4.8E-16 1.7E-20 112.2 15.0 118 4-131 18-135 (192)
43 3gjy_A Spermidine synthase; AP 99.7 1.6E-16 5.6E-21 123.6 12.7 107 17-130 85-200 (317)
44 3grz_A L11 mtase, ribosomal pr 99.7 6.5E-16 2.2E-20 113.3 15.0 147 7-186 47-195 (205)
45 2nxc_A L11 mtase, ribosomal pr 99.7 1.8E-15 6.2E-20 114.9 17.9 147 6-186 106-254 (254)
46 1ws6_A Methyltransferase; stru 99.7 9.2E-16 3.1E-20 109.0 15.1 105 19-131 41-148 (171)
47 2fpo_A Methylase YHHF; structu 99.7 3.5E-16 1.2E-20 114.9 13.3 105 18-131 53-161 (202)
48 3lpm_A Putative methyltransfer 99.7 1.4E-16 4.9E-21 121.2 11.4 114 8-128 37-174 (259)
49 3eey_A Putative rRNA methylase 99.7 1.7E-16 5.8E-21 115.7 11.3 108 17-130 20-139 (197)
50 3mb5_A SAM-dependent methyltra 99.7 1.4E-16 4.9E-21 120.6 11.2 117 4-130 78-194 (255)
51 3dlc_A Putative S-adenosyl-L-m 99.7 2E-16 6.9E-21 116.6 11.6 117 8-133 30-151 (219)
52 3f4k_A Putative methyltransfer 99.7 1.1E-16 3.7E-21 121.2 9.9 109 17-134 44-154 (257)
53 3kkz_A Uncharacterized protein 99.7 1.1E-16 3.8E-21 122.1 9.7 109 17-134 44-154 (267)
54 3ajd_A Putative methyltransfer 99.7 7.2E-16 2.5E-20 118.3 14.1 121 9-133 73-214 (274)
55 2b3t_A Protein methyltransfera 99.7 6.6E-16 2.3E-20 118.5 13.6 116 4-129 92-237 (276)
56 2pt6_A Spermidine synthase; tr 99.7 5E-16 1.7E-20 121.8 12.9 106 17-129 114-229 (321)
57 2i7c_A Spermidine synthase; tr 99.7 5.6E-16 1.9E-20 119.5 12.9 107 17-130 76-192 (283)
58 3m6w_A RRNA methylase; rRNA me 99.7 8.6E-16 2.9E-20 125.4 14.5 120 6-133 88-232 (464)
59 3hem_A Cyclopropane-fatty-acyl 99.7 1.1E-15 3.9E-20 118.5 14.3 116 7-134 57-187 (302)
60 3g89_A Ribosomal RNA small sub 99.7 4.3E-16 1.5E-20 118.0 11.5 103 19-128 80-182 (249)
61 2fca_A TRNA (guanine-N(7)-)-me 99.7 1.3E-15 4.5E-20 112.7 13.8 105 18-129 37-152 (213)
62 3lbf_A Protein-L-isoaspartate 99.7 5.8E-16 2E-20 113.9 11.7 112 4-129 62-173 (210)
63 2ozv_A Hypothetical protein AT 99.7 2.4E-16 8.1E-21 120.2 9.8 118 10-128 27-168 (260)
64 2igt_A SAM dependent methyltra 99.7 6.9E-15 2.4E-19 115.8 18.2 115 11-131 144-273 (332)
65 1yzh_A TRNA (guanine-N(7)-)-me 99.7 9E-16 3.1E-20 113.5 12.2 104 19-129 41-155 (214)
66 1ixk_A Methyltransferase; open 99.7 1.2E-15 4E-20 119.4 13.1 122 4-133 103-249 (315)
67 3m4x_A NOL1/NOP2/SUN family pr 99.7 1.3E-15 4.4E-20 124.2 13.7 122 5-133 91-237 (456)
68 3a27_A TYW2, uncharacterized p 99.7 5.1E-16 1.7E-20 119.1 10.7 114 8-132 108-221 (272)
69 3gu3_A Methyltransferase; alph 99.7 4.2E-16 1.4E-20 120.0 10.2 108 16-133 19-129 (284)
70 4dzr_A Protein-(glutamine-N5) 99.7 1.6E-16 5.5E-21 116.8 7.4 119 4-128 11-163 (215)
71 1dus_A MJ0882; hypothetical pr 99.7 4.8E-15 1.6E-19 107.1 15.1 108 13-131 46-158 (194)
72 2yxd_A Probable cobalt-precorr 99.7 4.7E-15 1.6E-19 106.3 14.8 113 4-131 20-132 (183)
73 2frn_A Hypothetical protein PH 99.7 1.6E-15 5.6E-20 116.6 13.0 103 19-132 125-227 (278)
74 4htf_A S-adenosylmethionine-de 99.7 1.7E-15 5.8E-20 116.5 13.0 104 19-131 68-174 (285)
75 1zx0_A Guanidinoacetate N-meth 99.6 7E-16 2.4E-20 115.7 10.3 114 10-132 49-172 (236)
76 3c0k_A UPF0064 protein YCCW; P 99.6 3.3E-15 1.1E-19 120.3 14.8 112 15-131 216-340 (396)
77 3kr9_A SAM-dependent methyltra 99.6 7.1E-16 2.4E-20 114.7 10.0 113 10-130 5-119 (225)
78 1nv8_A HEMK protein; class I a 99.6 4.3E-15 1.5E-19 114.6 14.8 115 4-129 105-248 (284)
79 1jsx_A Glucose-inhibited divis 99.6 1.9E-15 6.6E-20 110.8 12.2 100 19-129 65-164 (207)
80 3dh0_A SAM dependent methyltra 99.6 3.7E-15 1.3E-19 110.1 13.8 111 16-134 34-147 (219)
81 3mgg_A Methyltransferase; NYSG 99.6 2.8E-15 9.7E-20 114.6 13.4 109 18-135 36-147 (276)
82 3ckk_A TRNA (guanine-N(7)-)-me 99.6 5.5E-15 1.9E-19 111.0 14.5 106 18-129 45-167 (235)
83 3g5t_A Trans-aconitate 3-methy 99.6 4.1E-15 1.4E-19 115.2 14.0 118 10-128 25-147 (299)
84 2b78_A Hypothetical protein SM 99.6 4.2E-15 1.4E-19 119.3 14.4 109 18-131 211-332 (385)
85 3g07_A 7SK snRNA methylphospha 99.6 8.5E-16 2.9E-20 118.9 9.8 115 18-135 45-225 (292)
86 1o54_A SAM-dependent O-methylt 99.6 2.1E-15 7E-20 115.8 11.4 114 7-130 100-213 (277)
87 3bus_A REBM, methyltransferase 99.6 2.6E-15 9E-20 114.6 11.9 120 6-134 45-170 (273)
88 1xxl_A YCGJ protein; structura 99.6 3.3E-15 1.1E-19 112.2 12.2 119 4-133 6-127 (239)
89 2yxe_A Protein-L-isoaspartate 99.6 2.8E-15 9.6E-20 110.6 11.5 115 4-129 62-176 (215)
90 1dl5_A Protein-L-isoaspartate 99.6 2.6E-15 9E-20 117.5 11.7 115 5-130 61-175 (317)
91 1kpg_A CFA synthase;, cyclopro 99.6 7.2E-15 2.4E-19 113.1 13.9 117 6-134 48-172 (287)
92 2frx_A Hypothetical protein YE 99.6 4.7E-15 1.6E-19 121.8 13.5 122 5-133 101-249 (479)
93 2as0_A Hypothetical protein PH 99.6 4.2E-15 1.5E-19 119.6 12.9 111 16-131 213-336 (396)
94 3gdh_A Trimethylguanosine synt 99.6 1.3E-16 4.6E-21 119.8 3.8 112 8-130 67-181 (241)
95 1pjz_A Thiopurine S-methyltran 99.6 1.4E-15 4.9E-20 111.7 9.2 115 3-127 7-137 (203)
96 1vl5_A Unknown conserved prote 99.6 3.6E-15 1.2E-19 113.2 11.7 107 15-132 33-142 (260)
97 2xvm_A Tellurite resistance pr 99.6 5.6E-15 1.9E-19 107.4 12.3 107 13-131 26-137 (199)
98 1sqg_A SUN protein, FMU protei 99.6 2.1E-14 7E-19 116.8 16.8 122 4-133 231-377 (429)
99 2yxl_A PH0851 protein, 450AA l 99.6 6.9E-15 2.4E-19 120.2 14.1 124 4-133 244-392 (450)
100 3evz_A Methyltransferase; NYSG 99.6 3.1E-15 1E-19 111.5 11.1 103 17-129 53-178 (230)
101 2pbf_A Protein-L-isoaspartate 99.6 5.7E-15 2E-19 109.9 12.5 119 5-129 64-192 (227)
102 2o57_A Putative sarcosine dime 99.6 2.9E-15 1E-19 115.8 11.2 108 17-133 80-190 (297)
103 2gb4_A Thiopurine S-methyltran 99.6 3.6E-15 1.2E-19 113.2 11.4 117 4-129 53-190 (252)
104 3dtn_A Putative methyltransfer 99.6 1E-15 3.5E-20 114.3 8.2 104 18-133 43-151 (234)
105 2qfm_A Spermine synthase; sper 99.6 8.4E-15 2.9E-19 115.4 13.6 107 19-130 188-314 (364)
106 3fzg_A 16S rRNA methylase; met 99.6 3.6E-14 1.2E-18 102.2 15.6 156 7-186 36-197 (200)
107 3lec_A NADB-rossmann superfami 99.6 2.8E-15 9.5E-20 111.7 10.1 113 10-130 11-125 (230)
108 2b25_A Hypothetical protein; s 99.6 4.1E-15 1.4E-19 117.2 11.6 115 8-129 94-218 (336)
109 3ocj_A Putative exported prote 99.6 1E-15 3.5E-20 119.0 8.1 109 17-133 116-230 (305)
110 2pwy_A TRNA (adenine-N(1)-)-me 99.6 4.6E-15 1.6E-19 112.3 11.5 112 8-130 85-198 (258)
111 1u2z_A Histone-lysine N-methyl 99.6 1.3E-14 4.5E-19 117.4 14.6 113 15-134 238-363 (433)
112 4df3_A Fibrillarin-like rRNA/T 99.6 2.9E-15 1E-19 111.9 9.8 106 17-129 75-181 (233)
113 3bwc_A Spermidine synthase; SA 99.6 4.1E-15 1.4E-19 115.8 11.0 106 18-129 94-209 (304)
114 3v97_A Ribosomal RNA large sub 99.6 1.1E-14 3.9E-19 124.6 14.6 113 12-132 532-659 (703)
115 2fk8_A Methoxy mycolic acid sy 99.6 1.3E-14 4.4E-19 113.3 13.7 116 7-134 75-198 (318)
116 3htx_A HEN1; HEN1, small RNA m 99.6 2.4E-14 8.2E-19 122.4 16.1 161 10-179 712-900 (950)
117 1wxx_A TT1595, hypothetical pr 99.6 5.6E-15 1.9E-19 118.4 11.7 106 19-131 209-326 (382)
118 3m70_A Tellurite resistance pr 99.6 2.4E-14 8E-19 110.2 14.8 102 16-130 117-223 (286)
119 3sso_A Methyltransferase; macr 99.6 1.3E-14 4.6E-19 115.5 13.5 163 10-186 205-392 (419)
120 3vc1_A Geranyl diphosphate 2-C 99.6 3.3E-15 1.1E-19 116.5 9.8 108 18-134 116-225 (312)
121 4dcm_A Ribosomal RNA large sub 99.6 3.3E-15 1.1E-19 119.4 9.9 103 18-129 221-333 (375)
122 3ofk_A Nodulation protein S; N 99.6 1.8E-15 6.2E-20 111.7 7.9 108 10-131 42-155 (216)
123 3lcc_A Putative methyl chlorid 99.6 2.8E-15 9.7E-20 112.1 9.0 105 19-134 66-175 (235)
124 2p7i_A Hypothetical protein; p 99.6 3.7E-15 1.2E-19 111.8 9.6 108 9-132 32-143 (250)
125 2vdv_E TRNA (guanine-N(7)-)-me 99.6 6.9E-15 2.4E-19 111.0 11.1 105 19-129 49-172 (246)
126 4dmg_A Putative uncharacterize 99.6 1.2E-14 4E-19 116.8 12.8 105 16-131 210-327 (393)
127 1yb2_A Hypothetical protein TA 99.6 2.3E-15 8E-20 115.4 8.4 106 14-130 105-211 (275)
128 1g8a_A Fibrillarin-like PRE-rR 99.6 5.4E-15 1.8E-19 110.1 10.2 103 18-129 72-177 (227)
129 3gnl_A Uncharacterized protein 99.6 5.2E-15 1.8E-19 111.1 10.0 113 10-130 11-125 (244)
130 2yvl_A TRMI protein, hypotheti 99.6 1.1E-14 3.8E-19 109.5 11.9 113 5-130 77-190 (248)
131 3k6r_A Putative transferase PH 99.6 6.6E-15 2.2E-19 112.9 10.6 103 18-131 124-226 (278)
132 1nt2_A Fibrillarin-like PRE-rR 99.6 1.3E-14 4.4E-19 107.2 11.8 102 18-129 56-160 (210)
133 1i1n_A Protein-L-isoaspartate 99.6 1.2E-14 4.1E-19 108.1 11.7 103 17-129 75-181 (226)
134 3tma_A Methyltransferase; thum 99.6 1E-14 3.5E-19 115.7 11.6 118 4-129 188-316 (354)
135 1wzn_A SAM-dependent methyltra 99.6 1.9E-14 6.4E-19 108.6 12.5 109 8-129 27-144 (252)
136 2ex4_A Adrenal gland protein A 99.6 2.3E-15 7.7E-20 113.1 7.3 116 7-132 63-187 (241)
137 1jg1_A PIMT;, protein-L-isoasp 99.6 1.1E-14 3.9E-19 109.0 11.2 113 4-129 76-188 (235)
138 2ipx_A RRNA 2'-O-methyltransfe 99.6 1.1E-14 3.8E-19 108.9 11.0 103 18-129 76-181 (233)
139 1fbn_A MJ fibrillarin homologu 99.6 4.9E-15 1.7E-19 110.7 9.0 104 18-129 73-177 (230)
140 1i9g_A Hypothetical protein RV 99.6 1.1E-14 3.7E-19 111.7 11.0 117 5-130 85-203 (280)
141 4fsd_A Arsenic methyltransfera 99.6 6.8E-15 2.3E-19 117.9 10.1 117 17-134 81-207 (383)
142 3thr_A Glycine N-methyltransfe 99.6 3.6E-14 1.2E-18 109.3 13.7 118 6-130 44-175 (293)
143 3uwp_A Histone-lysine N-methyl 99.6 3.7E-14 1.3E-18 113.4 13.7 112 16-134 170-292 (438)
144 3bkx_A SAM-dependent methyltra 99.6 2.8E-14 9.5E-19 109.0 12.6 111 17-133 41-162 (275)
145 3dmg_A Probable ribosomal RNA 99.6 1.8E-14 6.1E-19 115.3 11.8 114 4-129 213-339 (381)
146 3h2b_A SAM-dependent methyltra 99.6 1.8E-14 6.3E-19 105.2 10.8 110 7-133 30-144 (203)
147 3o4f_A Spermidine synthase; am 99.6 1.4E-14 4.8E-19 111.3 10.4 108 15-129 79-197 (294)
148 3r0q_C Probable protein argini 99.6 1.4E-14 4.8E-19 115.8 10.8 106 16-132 60-171 (376)
149 3q7e_A Protein arginine N-meth 99.6 2.7E-14 9.2E-19 113.1 12.3 105 16-130 63-173 (349)
150 3ou2_A SAM-dependent methyltra 99.6 1.1E-14 3.9E-19 107.2 9.4 109 9-133 36-149 (218)
151 2p8j_A S-adenosylmethionine-de 99.6 1.3E-14 4.5E-19 106.3 9.7 118 4-132 8-130 (209)
152 4hg2_A Methyltransferase type 99.6 6E-15 2.1E-19 112.2 7.9 105 9-130 28-135 (257)
153 1vbf_A 231AA long hypothetical 99.6 2.7E-14 9.2E-19 106.5 11.1 111 4-130 55-165 (231)
154 2kw5_A SLR1183 protein; struct 99.6 1.7E-14 5.9E-19 105.3 9.8 113 10-134 20-135 (202)
155 3id6_C Fibrillarin-like rRNA/T 99.6 3.6E-14 1.2E-18 106.1 11.5 106 17-129 74-180 (232)
156 2cmg_A Spermidine synthase; tr 99.6 2.7E-15 9.3E-20 114.4 5.5 97 18-129 71-170 (262)
157 1y8c_A S-adenosylmethionine-de 99.6 3.5E-14 1.2E-18 106.4 11.2 110 7-129 23-141 (246)
158 2dul_A N(2),N(2)-dimethylguano 99.6 9.7E-14 3.3E-18 110.9 14.2 106 16-130 44-164 (378)
159 3axs_A Probable N(2),N(2)-dime 99.5 3.5E-14 1.2E-18 113.7 10.9 105 19-130 52-158 (392)
160 1r18_A Protein-L-isoaspartate( 99.5 2.1E-14 7.1E-19 107.0 8.9 103 17-129 82-193 (227)
161 2fyt_A Protein arginine N-meth 99.5 6E-14 2E-18 110.8 11.9 103 16-128 61-169 (340)
162 2y1w_A Histone-arginine methyl 99.5 6E-14 2E-18 111.1 11.8 102 17-129 48-154 (348)
163 1g6q_1 HnRNP arginine N-methyl 99.5 1.1E-13 3.8E-18 108.7 13.3 107 13-129 32-144 (328)
164 3ujc_A Phosphoethanolamine N-m 99.5 7.2E-15 2.5E-19 111.4 6.0 104 18-133 54-162 (266)
165 3dli_A Methyltransferase; PSI- 99.5 2.1E-14 7.3E-19 107.7 8.4 98 18-132 40-142 (240)
166 3hnr_A Probable methyltransfer 99.5 4.2E-14 1.4E-18 104.5 9.9 108 9-133 36-148 (220)
167 3g5l_A Putative S-adenosylmeth 99.5 2.8E-14 9.6E-19 107.8 8.9 98 19-129 44-144 (253)
168 1o9g_A RRNA methyltransferase; 99.5 1.2E-14 4.2E-19 109.8 7.0 120 9-131 38-215 (250)
169 3dp7_A SAM-dependent methyltra 99.5 6.5E-14 2.2E-18 111.5 11.4 108 18-134 178-291 (363)
170 1ve3_A Hypothetical protein PH 99.5 8.1E-14 2.8E-18 103.3 11.1 111 10-132 28-144 (227)
171 2h00_A Methyltransferase 10 do 99.5 1.3E-14 4.5E-19 109.8 6.9 98 5-105 46-149 (254)
172 2yqz_A Hypothetical protein TT 99.5 8.3E-14 2.8E-18 105.5 11.3 100 18-129 38-140 (263)
173 3pfg_A N-methyltransferase; N, 99.5 5.3E-14 1.8E-18 106.9 10.2 105 10-131 40-152 (263)
174 3e8s_A Putative SAM dependent 99.5 1.3E-13 4.4E-18 101.9 12.0 105 15-132 48-154 (227)
175 2yx1_A Hypothetical protein MJ 99.5 1.1E-13 3.6E-18 109.2 12.1 100 18-132 194-293 (336)
176 1ri5_A MRNA capping enzyme; me 99.5 9.5E-14 3.2E-18 107.0 11.6 106 18-131 63-175 (298)
177 4hc4_A Protein arginine N-meth 99.5 7.7E-14 2.6E-18 111.2 11.3 104 16-130 80-189 (376)
178 2p35_A Trans-aconitate 2-methy 99.5 2.9E-14 1E-18 107.8 8.4 98 18-130 32-132 (259)
179 3mcz_A O-methyltransferase; ad 99.5 9.1E-14 3.1E-18 110.0 11.6 108 20-135 180-292 (352)
180 3gwz_A MMCR; methyltransferase 99.5 1E-13 3.6E-18 110.5 11.5 106 18-134 201-311 (369)
181 3d2l_A SAM-dependent methyltra 99.5 1.4E-13 4.7E-18 103.1 11.1 107 9-129 22-136 (243)
182 3i53_A O-methyltransferase; CO 99.5 7.4E-14 2.5E-18 109.7 10.1 106 19-135 169-279 (332)
183 3p2e_A 16S rRNA methylase; met 99.5 3.5E-14 1.2E-18 105.9 7.7 103 18-128 23-137 (225)
184 3g2m_A PCZA361.24; SAM-depende 99.5 2.1E-14 7.2E-19 111.2 6.7 104 19-133 82-193 (299)
185 3bt7_A TRNA (uracil-5-)-methyl 99.5 3.4E-13 1.2E-17 107.6 13.7 123 2-131 193-327 (369)
186 3e23_A Uncharacterized protein 99.5 5.4E-14 1.8E-18 103.4 8.5 103 11-131 34-142 (211)
187 3bkw_A MLL3908 protein, S-aden 99.5 6.4E-14 2.2E-18 104.9 9.0 107 11-130 35-144 (243)
188 3ccf_A Cyclopropane-fatty-acyl 99.5 8.1E-14 2.8E-18 106.8 9.8 100 15-131 53-155 (279)
189 2jjq_A Uncharacterized RNA met 99.5 3.1E-13 1.1E-17 109.6 13.6 113 2-129 272-386 (425)
190 3sm3_A SAM-dependent methyltra 99.5 1E-13 3.5E-18 103.1 9.8 104 18-131 29-142 (235)
191 3i9f_A Putative type 11 methyl 99.5 1E-13 3.6E-18 98.5 9.3 100 16-134 14-116 (170)
192 3m33_A Uncharacterized protein 99.5 2.2E-14 7.6E-19 106.8 5.7 102 9-127 36-139 (226)
193 2qm3_A Predicted methyltransfe 99.5 1.1E-13 3.9E-18 110.5 9.7 102 19-128 172-276 (373)
194 2vdw_A Vaccinia virus capping 99.5 2.7E-13 9.3E-18 105.3 11.5 106 20-131 49-170 (302)
195 1xtp_A LMAJ004091AAA; SGPP, st 99.5 1.3E-13 4.5E-18 103.9 9.5 101 19-131 93-198 (254)
196 3q87_B N6 adenine specific DNA 99.5 2E-13 7E-18 97.4 9.9 104 3-130 6-123 (170)
197 3ege_A Putative methyltransfer 99.5 5.3E-14 1.8E-18 106.9 7.2 110 5-132 20-132 (261)
198 3b3j_A Histone-arginine methyl 99.5 2.2E-13 7.7E-18 112.0 11.4 100 18-128 157-261 (480)
199 1qzz_A RDMB, aclacinomycin-10- 99.5 1.4E-13 4.9E-18 109.6 9.9 103 18-131 181-288 (374)
200 1x19_A CRTF-related protein; m 99.5 6.1E-13 2.1E-17 105.6 13.4 106 18-134 189-299 (359)
201 2r3s_A Uncharacterized protein 99.5 4.4E-13 1.5E-17 105.2 12.1 107 18-134 164-275 (335)
202 3ggd_A SAM-dependent methyltra 99.5 2.3E-13 7.9E-18 102.2 10.1 105 18-132 55-165 (245)
203 3mq2_A 16S rRNA methyltransfer 99.5 6.5E-14 2.2E-18 103.5 6.8 103 17-129 25-139 (218)
204 1tw3_A COMT, carminomycin 4-O- 99.5 2.7E-13 9.2E-18 107.6 10.7 104 18-132 182-290 (360)
205 3tm4_A TRNA (guanine N2-)-meth 99.5 3.9E-13 1.3E-17 107.4 11.5 115 3-127 202-327 (373)
206 1wy7_A Hypothetical protein PH 99.5 2.6E-12 8.9E-17 94.0 15.0 110 3-128 30-147 (207)
207 2pjd_A Ribosomal RNA small sub 99.5 1.8E-13 6.1E-18 108.2 9.1 100 18-129 195-302 (343)
208 2b9e_A NOL1/NOP2/SUN domain fa 99.5 7.2E-13 2.5E-17 103.2 12.3 120 7-132 90-236 (309)
209 3iv6_A Putative Zn-dependent a 99.5 1.8E-13 6.3E-18 104.0 8.7 101 16-129 42-147 (261)
210 2ip2_A Probable phenazine-spec 99.5 2.5E-13 8.5E-18 106.7 9.7 103 21-134 169-276 (334)
211 3l8d_A Methyltransferase; stru 99.5 3.3E-13 1.1E-17 101.0 9.9 108 10-131 43-154 (242)
212 2aot_A HMT, histamine N-methyl 99.5 6.9E-13 2.4E-17 102.4 11.9 108 19-129 52-171 (292)
213 2qe6_A Uncharacterized protein 99.5 1.3E-12 4.5E-17 100.1 13.4 111 19-133 77-199 (274)
214 1ej0_A FTSJ; methyltransferase 99.5 3.8E-13 1.3E-17 95.5 9.3 99 17-131 20-137 (180)
215 3bgv_A MRNA CAP guanine-N7 met 99.5 8.3E-13 2.8E-17 102.9 12.0 108 19-131 34-156 (313)
216 3bzb_A Uncharacterized protein 99.4 1.8E-12 6.1E-17 99.7 13.7 115 7-128 64-203 (281)
217 3bxo_A N,N-dimethyltransferase 99.4 3.9E-13 1.3E-17 100.3 9.5 98 18-132 39-143 (239)
218 3cgg_A SAM-dependent methyltra 99.4 8.3E-13 2.8E-17 95.3 10.7 104 9-130 38-147 (195)
219 2gs9_A Hypothetical protein TT 99.4 2.4E-13 8.1E-18 99.9 7.8 96 19-132 36-134 (211)
220 1uwv_A 23S rRNA (uracil-5-)-me 99.4 1.3E-12 4.6E-17 106.2 12.9 115 7-129 271-388 (433)
221 2pxx_A Uncharacterized protein 99.4 2.3E-13 7.9E-18 99.8 6.4 110 10-131 32-160 (215)
222 1ne2_A Hypothetical protein TA 99.4 3.6E-12 1.2E-16 92.9 12.8 107 3-129 32-146 (200)
223 2avn_A Ubiquinone/menaquinone 99.4 8.1E-13 2.8E-17 100.3 9.6 95 19-130 54-152 (260)
224 2i62_A Nicotinamide N-methyltr 99.4 2.8E-13 9.7E-18 102.6 6.9 110 18-132 55-200 (265)
225 1p91_A Ribosomal RNA large sub 99.4 2.5E-12 8.7E-17 97.9 10.5 96 18-131 84-179 (269)
226 3tos_A CALS11; methyltransfera 99.4 2.7E-11 9.1E-16 91.5 15.6 149 18-184 68-254 (257)
227 2a14_A Indolethylamine N-methy 99.4 2.1E-13 7.1E-18 103.9 3.8 109 19-132 55-199 (263)
228 2plw_A Ribosomal RNA methyltra 99.4 4.1E-12 1.4E-16 92.5 10.3 99 18-129 21-153 (201)
229 3c6k_A Spermine synthase; sper 99.4 3.2E-12 1.1E-16 101.2 10.2 107 18-129 204-330 (381)
230 2qy6_A UPF0209 protein YFCK; s 99.4 3.4E-12 1.2E-16 96.9 9.7 108 19-128 60-211 (257)
231 2f8l_A Hypothetical protein LM 99.4 3.3E-12 1.1E-16 100.9 9.7 116 4-129 111-255 (344)
232 2g72_A Phenylethanolamine N-me 99.3 2.9E-12 9.8E-17 98.7 8.9 111 19-132 71-217 (289)
233 3lcv_B Sisomicin-gentamicin re 99.3 9.6E-12 3.3E-16 93.6 11.1 154 9-185 121-280 (281)
234 1vlm_A SAM-dependent methyltra 99.3 3.8E-12 1.3E-16 94.2 8.8 102 9-132 37-141 (219)
235 3dou_A Ribosomal RNA large sub 99.3 1E-11 3.4E-16 90.3 10.6 97 18-129 24-138 (191)
236 3giw_A Protein of unknown func 99.3 1.3E-11 4.4E-16 94.1 11.4 113 18-132 77-202 (277)
237 1zq9_A Probable dimethyladenos 99.3 8.9E-12 3E-16 96.0 10.6 90 4-105 13-102 (285)
238 4e2x_A TCAB9; kijanose, tetron 99.3 1.9E-12 6.4E-17 104.7 7.1 100 19-131 107-209 (416)
239 3cc8_A Putative methyltransfer 99.3 3.3E-12 1.1E-16 94.5 6.9 98 18-131 31-131 (230)
240 2nyu_A Putative ribosomal RNA 99.3 2.1E-11 7.1E-16 88.3 10.8 100 18-130 21-145 (196)
241 3opn_A Putative hemolysin; str 99.3 1.3E-12 4.4E-17 97.9 4.4 99 19-129 37-136 (232)
242 3hp7_A Hemolysin, putative; st 99.3 5.8E-12 2E-16 97.0 8.1 99 19-129 85-184 (291)
243 2r6z_A UPF0341 protein in RSP 99.3 3.3E-12 1.1E-16 97.1 6.4 91 9-105 73-170 (258)
244 2h1r_A Dimethyladenosine trans 99.3 1.4E-11 4.9E-16 95.5 9.9 90 4-106 27-116 (299)
245 3frh_A 16S rRNA methylase; met 99.3 1.6E-10 5.5E-15 86.2 14.6 149 10-186 96-251 (253)
246 3lst_A CALO1 methyltransferase 99.3 3.9E-12 1.3E-16 100.6 6.0 104 18-135 183-291 (348)
247 3reo_A (ISO)eugenol O-methyltr 99.3 1.2E-11 4.1E-16 98.6 8.7 97 19-134 203-304 (368)
248 2zfu_A Nucleomethylin, cerebra 99.3 3.2E-11 1.1E-15 88.7 10.4 95 9-132 57-153 (215)
249 3k0b_A Predicted N6-adenine-sp 99.3 2.1E-11 7.2E-16 97.9 9.8 115 5-127 187-347 (393)
250 2ih2_A Modification methylase 99.3 1.5E-11 5.1E-16 99.3 8.7 107 4-128 24-162 (421)
251 3ll7_A Putative methyltransfer 99.3 1.2E-11 4.2E-16 99.3 8.0 77 20-105 94-172 (410)
252 1af7_A Chemotaxis receptor met 99.3 1E-11 3.4E-16 95.1 7.0 104 19-129 105-251 (274)
253 3ldu_A Putative methylase; str 99.2 1.5E-11 5.2E-16 98.5 8.1 111 9-127 185-341 (385)
254 3ldg_A Putative uncharacterize 99.2 3.7E-11 1.3E-15 96.2 10.2 115 5-127 180-340 (384)
255 3gru_A Dimethyladenosine trans 99.2 1.7E-10 5.9E-15 89.1 12.9 88 5-106 36-124 (295)
256 4a6d_A Hydroxyindole O-methylt 99.2 5.9E-11 2E-15 94.1 9.9 105 18-134 178-287 (353)
257 3p9c_A Caffeic acid O-methyltr 99.2 1.4E-11 4.9E-16 98.0 6.4 97 19-134 201-302 (364)
258 2oyr_A UPF0341 protein YHIQ; a 99.2 6.4E-12 2.2E-16 95.3 3.8 85 12-105 79-173 (258)
259 4azs_A Methyltransferase WBDD; 99.2 5.2E-11 1.8E-15 99.9 9.5 101 17-126 64-169 (569)
260 1m6y_A S-adenosyl-methyltransf 99.2 1.5E-10 5.2E-15 89.7 11.3 84 17-105 24-107 (301)
261 2okc_A Type I restriction enzy 99.2 5E-11 1.7E-15 97.2 8.5 117 4-128 156-305 (445)
262 1fp1_D Isoliquiritigenin 2'-O- 99.2 2.9E-11 9.8E-16 96.4 6.1 97 19-134 209-310 (372)
263 4fzv_A Putative methyltransfer 99.2 5.4E-10 1.8E-14 88.4 12.6 119 8-133 137-287 (359)
264 1fp2_A Isoflavone O-methyltran 99.1 7.8E-11 2.7E-15 93.2 7.0 98 18-134 187-292 (352)
265 3tqs_A Ribosomal RNA small sub 99.1 4.9E-10 1.7E-14 84.9 10.5 91 4-105 14-105 (255)
266 2xyq_A Putative 2'-O-methyl tr 99.1 4.2E-10 1.4E-14 86.7 8.8 90 17-130 61-171 (290)
267 2ar0_A M.ecoki, type I restric 99.1 6E-10 2.1E-14 92.9 10.2 119 4-128 154-310 (541)
268 3fut_A Dimethyladenosine trans 99.1 1.3E-09 4.6E-14 83.2 10.7 97 5-116 33-130 (271)
269 1qam_A ERMC' methyltransferase 99.0 1.1E-09 3.8E-14 82.4 9.9 61 17-83 28-88 (244)
270 1zg3_A Isoflavanone 4'-O-methy 99.0 5.2E-10 1.8E-14 88.7 8.2 97 18-133 192-296 (358)
271 2p41_A Type II methyltransfera 99.0 7.9E-11 2.7E-15 91.5 2.4 95 19-129 82-190 (305)
272 2oxt_A Nucleoside-2'-O-methylt 99.0 4.1E-11 1.4E-15 91.3 0.7 98 19-130 74-185 (265)
273 2wa2_A Non-structural protein 99.0 4.7E-11 1.6E-15 91.6 0.9 98 19-130 82-193 (276)
274 4gqb_A Protein arginine N-meth 99.0 2.3E-09 7.9E-14 90.3 10.3 99 20-127 358-464 (637)
275 3v97_A Ribosomal RNA large sub 99.0 1.9E-09 6.6E-14 92.4 8.8 119 5-128 176-345 (703)
276 1yub_A Ermam, rRNA methyltrans 98.9 3.5E-11 1.2E-15 90.7 -2.3 102 14-128 24-143 (245)
277 3uzu_A Ribosomal RNA small sub 98.9 7E-09 2.4E-13 79.5 10.4 74 5-83 28-102 (279)
278 3ftd_A Dimethyladenosine trans 98.9 9.2E-09 3.2E-13 77.6 9.9 109 6-128 18-129 (249)
279 3ua3_A Protein arginine N-meth 98.9 1E-08 3.6E-13 86.6 10.2 105 20-127 410-531 (745)
280 3lkd_A Type I restriction-modi 98.9 3.6E-08 1.2E-12 82.1 12.7 121 3-128 201-356 (542)
281 3khk_A Type I restriction-modi 98.9 2.6E-09 8.8E-14 89.1 5.8 119 3-128 229-393 (544)
282 1qyr_A KSGA, high level kasuga 98.8 2.4E-08 8.1E-13 75.5 9.3 94 4-106 6-100 (252)
283 2oo3_A Protein involved in cat 98.8 7.8E-09 2.7E-13 78.7 6.3 111 8-128 81-196 (283)
284 3s1s_A Restriction endonucleas 98.7 9.3E-08 3.2E-12 82.1 11.5 120 3-128 299-463 (878)
285 2ld4_A Anamorsin; methyltransf 98.7 5.1E-09 1.7E-13 74.5 2.9 88 17-131 10-102 (176)
286 2k4m_A TR8_protein, UPF0146 pr 98.6 2.2E-07 7.6E-12 63.7 8.6 95 9-129 24-120 (153)
287 1wg8_A Predicted S-adenosylmet 98.6 2E-07 7E-12 70.9 9.2 79 17-105 20-98 (285)
288 3tka_A Ribosomal RNA small sub 98.3 3.2E-06 1.1E-10 65.8 8.8 82 18-105 56-137 (347)
289 4auk_A Ribosomal RNA large sub 98.3 2.1E-06 7.3E-11 67.8 7.7 70 18-105 210-279 (375)
290 3ufb_A Type I restriction-modi 98.3 3.8E-06 1.3E-10 69.9 9.4 121 3-128 201-360 (530)
291 3evf_A RNA-directed RNA polyme 98.1 5.7E-06 2E-10 62.6 6.8 101 18-129 73-183 (277)
292 1i4w_A Mitochondrial replicati 98.0 1.8E-05 6.3E-10 62.4 8.5 59 20-83 59-117 (353)
293 3gcz_A Polyprotein; flavivirus 98.0 2.8E-06 9.5E-11 64.4 3.2 101 18-129 89-200 (282)
294 3pvc_A TRNA 5-methylaminomethy 98.0 1.4E-05 4.7E-10 68.5 7.3 107 20-128 59-209 (689)
295 2zig_A TTHA0409, putative modi 97.9 4.4E-05 1.5E-09 58.8 8.8 57 9-68 223-281 (297)
296 3vyw_A MNMC2; tRNA wobble urid 97.9 0.0001 3.5E-09 56.8 10.3 103 19-127 96-223 (308)
297 2px2_A Genome polyprotein [con 97.9 5.2E-06 1.8E-10 62.1 2.6 94 19-129 73-182 (269)
298 3p8z_A Mtase, non-structural p 97.8 0.00013 4.4E-09 54.0 8.6 99 17-128 76-184 (267)
299 3eld_A Methyltransferase; flav 97.7 2.2E-05 7.5E-10 60.0 4.0 100 19-129 81-190 (300)
300 3r24_A NSP16, 2'-O-methyl tran 97.7 0.00014 4.9E-09 55.4 7.9 88 19-129 109-216 (344)
301 2py6_A Methyltransferase FKBM; 97.6 0.00028 9.7E-09 56.7 8.2 60 18-77 225-288 (409)
302 3ps9_A TRNA 5-methylaminomethy 97.5 0.0006 2E-08 58.2 10.5 106 21-128 68-217 (676)
303 2efj_A 3,7-dimethylxanthine me 97.5 0.00055 1.9E-08 54.5 9.5 78 20-104 53-157 (384)
304 3lkz_A Non-structural protein 97.5 0.00018 6.2E-09 54.9 6.0 99 18-128 93-202 (321)
305 1g60_A Adenine-specific methyl 97.4 0.00045 1.5E-08 52.1 7.2 58 9-69 200-259 (260)
306 1f8f_A Benzyl alcohol dehydrog 97.4 0.00092 3.1E-08 52.8 8.8 102 17-131 188-290 (371)
307 3s2e_A Zinc-containing alcohol 97.4 0.0011 3.7E-08 51.7 9.1 100 17-131 164-264 (340)
308 3b5i_A S-adenosyl-L-methionine 97.3 0.0003 1E-08 55.8 5.2 39 20-58 53-105 (374)
309 2dph_A Formaldehyde dismutase; 97.3 0.0013 4.4E-08 52.5 8.7 106 16-131 182-300 (398)
310 1m6e_X S-adenosyl-L-methionnin 97.2 0.00015 5.1E-09 57.3 2.8 108 20-131 52-210 (359)
311 1pqw_A Polyketide synthase; ro 97.2 0.00096 3.3E-08 47.8 6.6 100 17-130 36-137 (198)
312 4ej6_A Putative zinc-binding d 97.2 0.0017 5.9E-08 51.3 8.4 104 15-131 178-285 (370)
313 1pl8_A Human sorbitol dehydrog 97.1 0.0036 1.2E-07 49.1 10.1 102 16-130 168-273 (356)
314 1g55_A DNA cytosine methyltran 97.1 0.0024 8.3E-08 50.1 8.5 76 20-105 2-77 (343)
315 2uyo_A Hypothetical protein ML 97.0 0.027 9.1E-07 43.5 13.8 111 19-132 102-220 (310)
316 2c0c_A Zinc binding alcohol de 97.0 0.0046 1.6E-07 48.7 9.3 97 16-130 160-261 (362)
317 4eez_A Alcohol dehydrogenase 1 97.0 0.013 4.3E-07 45.7 11.6 103 17-131 161-264 (348)
318 2vz8_A Fatty acid synthase; tr 96.9 0.00038 1.3E-08 67.3 3.2 102 20-131 1241-1349(2512)
319 3g7u_A Cytosine-specific methy 96.9 0.0038 1.3E-07 49.6 8.5 77 21-105 3-80 (376)
320 1e3j_A NADP(H)-dependent ketos 96.9 0.011 3.7E-07 46.3 10.9 105 16-130 165-271 (352)
321 3fpc_A NADP-dependent alcohol 96.9 0.0023 8E-08 50.1 6.9 105 16-132 163-268 (352)
322 1cdo_A Alcohol dehydrogenase; 96.9 0.0079 2.7E-07 47.5 9.9 100 17-131 190-295 (374)
323 3jv7_A ADH-A; dehydrogenase, n 96.9 0.0065 2.2E-07 47.4 9.3 103 17-132 169-272 (345)
324 1e3i_A Alcohol dehydrogenase, 96.9 0.0076 2.6E-07 47.6 9.8 101 18-131 194-298 (376)
325 4a2c_A Galactitol-1-phosphate 96.9 0.02 6.9E-07 44.5 12.1 105 17-133 158-263 (346)
326 1kol_A Formaldehyde dehydrogen 96.8 0.0074 2.5E-07 48.0 9.5 105 17-131 183-301 (398)
327 4b7c_A Probable oxidoreductase 96.8 0.0084 2.9E-07 46.5 9.6 102 16-131 146-249 (336)
328 1p0f_A NADP-dependent alcohol 96.8 0.0063 2.1E-07 48.0 9.0 99 17-131 189-294 (373)
329 1uuf_A YAHK, zinc-type alcohol 96.8 0.017 5.8E-07 45.6 11.4 96 17-130 192-288 (369)
330 1g60_A Adenine-specific methyl 96.8 0.0012 4.1E-08 49.7 4.5 53 72-129 4-73 (260)
331 3m6i_A L-arabinitol 4-dehydrog 96.8 0.012 4E-07 46.2 10.4 106 16-131 176-284 (363)
332 1v3u_A Leukotriene B4 12- hydr 96.8 0.0054 1.8E-07 47.6 8.2 97 17-130 143-244 (333)
333 1boo_A Protein (N-4 cytosine-s 96.8 0.0017 5.7E-08 50.6 5.2 54 71-129 13-83 (323)
334 3uko_A Alcohol dehydrogenase c 96.8 0.004 1.4E-07 49.3 7.4 103 17-132 191-297 (378)
335 2jhf_A Alcohol dehydrogenase E 96.8 0.0095 3.2E-07 47.0 9.6 99 17-131 189-294 (374)
336 1rjd_A PPM1P, carboxy methyl t 96.7 0.033 1.1E-06 43.5 12.2 118 11-131 89-234 (334)
337 3qwb_A Probable quinone oxidor 96.7 0.0037 1.3E-07 48.5 6.8 100 18-131 147-248 (334)
338 3gms_A Putative NADPH:quinone 96.7 0.0041 1.4E-07 48.5 7.0 101 17-131 142-244 (340)
339 2hcy_A Alcohol dehydrogenase 1 96.7 0.012 4.1E-07 45.9 9.6 99 17-131 167-270 (347)
340 2fzw_A Alcohol dehydrogenase c 96.7 0.011 3.6E-07 46.7 9.1 99 17-131 188-293 (373)
341 4eye_A Probable oxidoreductase 96.6 0.0062 2.1E-07 47.5 7.6 100 17-131 157-258 (342)
342 1rjw_A ADH-HT, alcohol dehydro 96.6 0.013 4.6E-07 45.5 9.5 101 16-131 161-262 (339)
343 3uog_A Alcohol dehydrogenase; 96.6 0.0039 1.3E-07 49.1 6.3 99 17-132 187-289 (363)
344 3ip1_A Alcohol dehydrogenase, 96.6 0.012 4E-07 47.1 9.1 102 18-131 212-319 (404)
345 1eg2_A Modification methylase 96.6 0.003 1E-07 49.1 5.4 54 71-129 37-105 (319)
346 2c7p_A Modification methylase 96.6 0.0068 2.3E-07 47.2 7.4 70 20-105 11-80 (327)
347 3jyn_A Quinone oxidoreductase; 96.6 0.0044 1.5E-07 47.9 6.2 100 18-131 139-240 (325)
348 4dvj_A Putative zinc-dependent 96.5 0.013 4.4E-07 46.2 8.8 97 19-129 171-269 (363)
349 3fwz_A Inner membrane protein 96.5 0.028 9.7E-07 37.8 9.4 93 21-128 8-103 (140)
350 3iht_A S-adenosyl-L-methionine 96.5 0.027 9.3E-07 38.8 9.0 114 8-132 27-149 (174)
351 4dup_A Quinone oxidoreductase; 96.5 0.007 2.4E-07 47.4 7.0 100 17-131 165-266 (353)
352 1wly_A CAAR, 2-haloacrylate re 96.5 0.0085 2.9E-07 46.5 7.3 99 18-130 144-244 (333)
353 2j3h_A NADP-dependent oxidored 96.4 0.0088 3E-07 46.6 7.3 98 17-130 153-255 (345)
354 2zig_A TTHA0409, putative modi 96.4 0.0045 1.5E-07 47.5 5.2 54 71-129 20-96 (297)
355 1qor_A Quinone oxidoreductase; 96.4 0.0063 2.2E-07 47.1 6.1 99 18-130 139-239 (327)
356 2zb4_A Prostaglandin reductase 96.3 0.018 6.3E-07 45.0 8.3 101 17-131 156-261 (357)
357 1jvb_A NAD(H)-dependent alcoho 96.3 0.013 4.5E-07 45.7 7.3 99 17-130 168-271 (347)
358 2h6e_A ADH-4, D-arabinose 1-de 96.2 0.033 1.1E-06 43.3 9.6 101 16-131 168-270 (344)
359 2b5w_A Glucose dehydrogenase; 96.2 0.043 1.5E-06 42.9 10.3 101 15-131 162-274 (357)
360 3fbg_A Putative arginate lyase 96.2 0.043 1.5E-06 42.7 10.0 95 19-128 150-246 (346)
361 1vj0_A Alcohol dehydrogenase, 96.2 0.013 4.4E-07 46.4 7.0 102 18-131 194-299 (380)
362 2eih_A Alcohol dehydrogenase; 96.1 0.011 3.7E-07 46.1 6.2 100 18-131 165-266 (343)
363 3two_A Mannitol dehydrogenase; 96.1 0.035 1.2E-06 43.2 9.0 93 16-131 173-266 (348)
364 1piw_A Hypothetical zinc-type 96.0 0.028 9.7E-07 44.0 8.1 99 16-130 176-276 (360)
365 1yb5_A Quinone oxidoreductase; 96.0 0.024 8.2E-07 44.4 7.7 100 17-130 168-269 (351)
366 2d8a_A PH0655, probable L-thre 96.0 0.025 8.6E-07 44.1 7.8 97 19-130 167-267 (348)
367 2qrv_A DNA (cytosine-5)-methyl 96.0 0.032 1.1E-06 42.8 8.1 77 19-105 15-92 (295)
368 3gaz_A Alcohol dehydrogenase s 96.0 0.037 1.3E-06 43.1 8.5 96 17-129 148-245 (343)
369 1yqd_A Sinapyl alcohol dehydro 95.8 0.083 2.8E-06 41.5 10.2 95 19-130 187-282 (366)
370 3qv2_A 5-cytosine DNA methyltr 95.8 0.081 2.8E-06 41.1 9.8 77 19-106 9-86 (327)
371 3gqv_A Enoyl reductase; medium 95.8 0.16 5.4E-06 39.9 11.6 98 18-130 163-263 (371)
372 2j8z_A Quinone oxidoreductase; 95.7 0.052 1.8E-06 42.4 8.4 100 18-131 161-262 (354)
373 1iz0_A Quinone oxidoreductase; 95.6 0.06 2.1E-06 41.0 8.4 93 17-130 123-218 (302)
374 4h0n_A DNMT2; SAH binding, tra 95.6 0.031 1E-06 43.6 6.7 76 20-105 3-78 (333)
375 3llv_A Exopolyphosphatase-rela 95.5 0.073 2.5E-06 35.5 7.7 92 20-127 6-100 (141)
376 2dq4_A L-threonine 3-dehydroge 95.5 0.013 4.6E-07 45.6 4.4 94 19-130 164-262 (343)
377 2cf5_A Atccad5, CAD, cinnamyl 95.3 0.075 2.6E-06 41.6 8.2 95 19-130 180-275 (357)
378 1lss_A TRK system potassium up 95.3 0.28 9.7E-06 32.2 9.9 94 20-127 4-100 (140)
379 4f3n_A Uncharacterized ACR, CO 95.1 0.045 1.5E-06 44.1 6.2 48 19-66 137-188 (432)
380 1eg2_A Modification methylase 95.1 0.053 1.8E-06 42.0 6.4 58 8-68 229-291 (319)
381 1boo_A Protein (N-4 cytosine-s 95.0 0.038 1.3E-06 42.8 5.6 58 9-69 240-299 (323)
382 3me5_A Cytosine-specific methy 95.0 0.063 2.1E-06 44.0 7.0 77 21-105 89-178 (482)
383 3krt_A Crotonyl COA reductase; 95.0 0.088 3E-06 42.7 7.8 103 17-130 226-344 (456)
384 4dcm_A Ribosomal RNA large sub 94.9 0.043 1.5E-06 43.5 5.7 95 19-129 38-135 (375)
385 4a0s_A Octenoyl-COA reductase/ 94.9 0.13 4.4E-06 41.5 8.7 103 17-131 218-337 (447)
386 1xa0_A Putative NADPH dependen 94.9 0.054 1.9E-06 41.7 6.3 93 22-131 152-247 (328)
387 3l9w_A Glutathione-regulated p 94.7 0.17 5.8E-06 40.6 8.7 94 20-128 4-100 (413)
388 3c85_A Putative glutathione-re 94.7 0.2 7E-06 34.9 8.3 95 20-128 39-137 (183)
389 3ubt_Y Modification methylase 94.6 0.25 8.4E-06 38.1 9.3 70 21-105 1-70 (331)
390 1jw9_B Molybdopterin biosynthe 94.6 0.28 9.4E-06 36.5 9.2 79 19-105 30-130 (249)
391 4a27_A Synaptic vesicle membra 94.6 0.07 2.4E-06 41.6 6.1 97 17-130 140-238 (349)
392 1gu7_A Enoyl-[acyl-carrier-pro 94.6 0.16 5.3E-06 39.7 8.1 106 18-131 165-276 (364)
393 1pjc_A Protein (L-alanine dehy 94.5 0.23 7.8E-06 39.0 8.9 100 18-131 165-268 (361)
394 2cdc_A Glucose dehydrogenase g 94.5 0.17 5.9E-06 39.6 8.2 94 20-131 181-279 (366)
395 1id1_A Putative potassium chan 94.4 0.32 1.1E-05 32.9 8.6 97 20-128 3-103 (153)
396 2vhw_A Alanine dehydrogenase; 94.4 0.16 5.6E-06 40.1 7.9 99 18-130 166-268 (377)
397 3nx4_A Putative oxidoreductase 94.3 0.047 1.6E-06 42.0 4.4 92 22-131 149-242 (324)
398 1zkd_A DUF185; NESG, RPR58, st 94.2 0.13 4.5E-06 40.9 6.9 46 21-66 82-133 (387)
399 2g1u_A Hypothetical protein TM 94.2 0.42 1.4E-05 32.4 8.8 97 18-128 17-116 (155)
400 2aef_A Calcium-gated potassium 94.2 0.87 3E-05 33.0 11.0 94 19-128 8-103 (234)
401 3t8y_A CHEB, chemotaxis respon 94.1 0.48 1.7E-05 32.1 9.0 96 28-130 9-106 (164)
402 3pi7_A NADH oxidoreductase; gr 94.0 0.35 1.2E-05 37.5 9.0 97 21-131 166-264 (349)
403 3l4b_C TRKA K+ channel protien 94.0 0.37 1.3E-05 34.7 8.6 93 22-128 2-97 (218)
404 3goh_A Alcohol dehydrogenase, 93.9 0.1 3.4E-06 40.0 5.7 87 18-129 141-228 (315)
405 2vn8_A Reticulon-4-interacting 93.8 0.34 1.2E-05 38.0 8.6 97 17-129 181-279 (375)
406 3p2y_A Alanine dehydrogenase/p 93.6 0.31 1.1E-05 38.6 8.0 102 19-136 183-308 (381)
407 2eez_A Alanine dehydrogenase; 93.6 0.31 1.1E-05 38.3 8.1 98 18-131 164-267 (369)
408 1lnq_A MTHK channels, potassiu 93.5 1.1 3.7E-05 34.5 10.9 93 20-128 115-209 (336)
409 4g65_A TRK system potassium up 93.5 0.62 2.1E-05 37.9 9.8 108 7-127 221-331 (461)
410 4dio_A NAD(P) transhydrogenase 93.4 0.38 1.3E-05 38.5 8.2 103 19-137 189-319 (405)
411 3ic5_A Putative saccharopine d 93.3 0.81 2.8E-05 28.8 8.6 80 20-115 5-88 (118)
412 1h2b_A Alcohol dehydrogenase; 93.3 0.43 1.5E-05 37.2 8.4 98 16-130 183-285 (359)
413 3abi_A Putative uncharacterize 93.3 0.52 1.8E-05 36.9 8.9 81 19-116 15-97 (365)
414 3f6c_A Positive transcription 93.3 0.96 3.3E-05 29.0 9.0 79 45-130 2-82 (134)
415 3ggo_A Prephenate dehydrogenas 93.2 0.36 1.2E-05 37.1 7.6 88 21-127 34-125 (314)
416 3hzh_A Chemotaxis response reg 93.1 1.2 4E-05 29.8 9.6 81 45-130 37-119 (157)
417 4fn4_A Short chain dehydrogena 93.1 1.4 4.7E-05 32.8 10.5 84 18-104 5-92 (254)
418 4fs3_A Enoyl-[acyl-carrier-pro 93.1 2 6.7E-05 31.7 13.2 80 18-104 4-94 (256)
419 3qvo_A NMRA family protein; st 93.1 0.93 3.2E-05 32.8 9.5 94 20-128 23-122 (236)
420 3k96_A Glycerol-3-phosphate de 92.9 0.46 1.6E-05 37.2 7.9 95 20-127 29-130 (356)
421 3eul_A Possible nitrate/nitrit 92.8 1.2 4.2E-05 29.4 9.2 81 44-130 15-97 (152)
422 3ce6_A Adenosylhomocysteinase; 92.7 0.65 2.2E-05 38.1 8.9 87 18-128 272-359 (494)
423 1l7d_A Nicotinamide nucleotide 92.7 0.41 1.4E-05 37.9 7.5 42 19-62 171-213 (384)
424 3pxx_A Carveol dehydrogenase; 92.6 2.4 8.2E-05 31.5 11.8 109 18-129 8-152 (287)
425 1x13_A NAD(P) transhydrogenase 92.6 0.4 1.4E-05 38.3 7.3 41 19-61 171-212 (401)
426 3gt0_A Pyrroline-5-carboxylate 92.5 0.31 1.1E-05 35.9 6.2 87 21-127 3-94 (247)
427 4g65_A TRK system potassium up 92.4 0.88 3E-05 37.0 9.2 72 20-105 3-77 (461)
428 3pid_A UDP-glucose 6-dehydroge 92.3 1.8 6E-05 35.0 10.7 102 15-132 31-155 (432)
429 1tt7_A YHFP; alcohol dehydroge 92.2 0.092 3.1E-06 40.5 3.2 92 22-131 153-248 (330)
430 4ezb_A Uncharacterized conserv 92.2 0.98 3.4E-05 34.7 9.0 89 21-128 25-119 (317)
431 3gg2_A Sugar dehydrogenase, UD 92.2 1.2 3.9E-05 36.2 9.7 97 21-130 3-122 (450)
432 3ioy_A Short-chain dehydrogena 92.2 1.1 3.9E-05 34.2 9.4 86 19-105 7-96 (319)
433 3tqh_A Quinone oxidoreductase; 92.2 1.5 5.2E-05 33.4 10.0 95 16-130 149-245 (321)
434 4g81_D Putative hexonate dehyd 92.1 1.7 5.8E-05 32.3 9.9 85 18-105 7-95 (255)
435 3nzo_A UDP-N-acetylglucosamine 92.1 1.5 5E-05 34.7 10.2 85 16-105 31-121 (399)
436 3eod_A Protein HNR; response r 91.8 1.6 5.5E-05 27.8 10.6 78 44-129 7-86 (130)
437 2zay_A Response regulator rece 91.8 1.5 5.1E-05 28.7 8.6 79 44-130 8-90 (147)
438 3hv2_A Response regulator/HD d 91.8 1.9 6.5E-05 28.5 9.2 79 44-130 14-94 (153)
439 1zsy_A Mitochondrial 2-enoyl t 91.8 0.34 1.2E-05 37.7 6.0 101 17-130 165-270 (357)
440 3kht_A Response regulator; PSI 91.8 1.8 6.1E-05 28.2 10.3 81 44-130 5-89 (144)
441 1dlj_A UDP-glucose dehydrogena 91.7 1.8 6.2E-05 34.4 10.2 89 22-128 2-115 (402)
442 4e7p_A Response regulator; DNA 91.4 2.1 7.1E-05 28.2 10.2 79 45-130 21-102 (150)
443 3h8v_A Ubiquitin-like modifier 91.4 1.7 6E-05 33.0 9.3 85 19-105 35-146 (292)
444 3i42_A Response regulator rece 91.3 1.8 6.2E-05 27.4 9.6 78 45-130 4-85 (127)
445 3h7a_A Short chain dehydrogena 91.3 1.5 5.3E-05 32.1 8.9 85 18-105 5-92 (252)
446 3e8x_A Putative NAD-dependent 91.1 0.64 2.2E-05 33.6 6.6 73 18-105 19-93 (236)
447 3t4x_A Oxidoreductase, short c 91.1 1.4 4.8E-05 32.6 8.6 83 19-105 9-94 (267)
448 4e21_A 6-phosphogluconate dehy 91.1 1.5 5E-05 34.4 9.0 91 19-127 21-112 (358)
449 2rjn_A Response regulator rece 91.0 2.3 7.8E-05 28.1 10.6 79 44-130 7-87 (154)
450 2g5c_A Prephenate dehydrogenas 91.0 0.87 3E-05 34.0 7.4 89 21-128 2-94 (281)
451 3ucx_A Short chain dehydrogena 90.9 3 0.0001 30.7 10.2 84 18-104 9-96 (264)
452 3cz5_A Two-component response 90.8 2.4 8.1E-05 27.9 9.4 80 44-130 5-87 (153)
453 3f1l_A Uncharacterized oxidore 90.7 1.9 6.5E-05 31.6 8.9 86 18-105 10-101 (252)
454 3kto_A Response regulator rece 90.6 1.5 5.1E-05 28.4 7.6 79 44-130 6-88 (136)
455 3rqi_A Response regulator prot 90.6 3 0.0001 28.7 9.5 79 44-130 7-87 (184)
456 3lyl_A 3-oxoacyl-(acyl-carrier 90.5 1.9 6.4E-05 31.3 8.7 84 19-105 4-91 (247)
457 3rih_A Short chain dehydrogena 90.5 4.4 0.00015 30.5 12.9 82 19-105 40-128 (293)
458 3i1j_A Oxidoreductase, short c 90.4 1.8 6.3E-05 31.3 8.6 83 18-105 12-103 (247)
459 3ijr_A Oxidoreductase, short c 90.4 4.5 0.00015 30.3 12.6 108 19-129 46-181 (291)
460 2y0c_A BCEC, UDP-glucose dehyd 90.3 2.3 7.9E-05 34.7 9.8 99 18-129 6-127 (478)
461 3b1f_A Putative prephenate deh 90.3 2.3 8E-05 31.8 9.2 89 20-127 6-98 (290)
462 3o26_A Salutaridine reductase; 90.2 1.2 4.3E-05 33.3 7.7 86 18-105 10-100 (311)
463 3rku_A Oxidoreductase YMR226C; 90.2 1.5 5.2E-05 32.9 8.2 87 18-105 31-124 (287)
464 3cg0_A Response regulator rece 90.2 2.5 8.6E-05 27.1 9.2 79 44-130 9-90 (140)
465 3to5_A CHEY homolog; alpha(5)b 90.1 2.1 7.1E-05 28.4 7.9 68 43-117 11-80 (134)
466 3ruf_A WBGU; rossmann fold, UD 90.1 1.4 4.8E-05 33.7 8.1 81 18-105 23-109 (351)
467 1wma_A Carbonyl reductase [NAD 90.1 1.7 5.7E-05 31.8 8.2 84 19-105 3-91 (276)
468 2qr3_A Two-component system re 90.1 2.6 8.8E-05 27.1 9.0 78 45-130 4-88 (140)
469 2f1k_A Prephenate dehydrogenas 90.1 1.1 3.9E-05 33.3 7.3 86 22-127 2-88 (279)
470 3grc_A Sensor protein, kinase; 90.1 2.6 8.9E-05 27.1 9.9 78 44-129 6-87 (140)
471 1xg5_A ARPG836; short chain de 90.0 2.7 9.2E-05 31.1 9.4 87 18-105 30-120 (279)
472 2hmt_A YUAA protein; RCK, KTN, 90.0 1.5 5E-05 28.7 7.2 93 19-127 5-101 (144)
473 2vz8_A Fatty acid synthase; tr 89.9 0.56 1.9E-05 46.0 6.6 103 17-129 1665-1769(2512)
474 3ilh_A Two component response 89.9 2.7 9.3E-05 27.1 9.4 84 45-129 10-99 (146)
475 3swr_A DNA (cytosine-5)-methyl 89.8 1.4 4.7E-05 39.4 8.5 76 21-105 541-627 (1002)
476 1qkk_A DCTD, C4-dicarboxylate 89.7 3.1 0.00011 27.4 9.5 79 44-130 3-83 (155)
477 4ina_A Saccharopine dehydrogen 89.6 3 0.0001 33.2 9.7 90 21-117 2-97 (405)
478 3lua_A Response regulator rece 89.5 2.9 0.0001 27.0 9.1 79 44-130 4-89 (140)
479 3ew7_A LMO0794 protein; Q8Y8U8 89.4 2.9 9.8E-05 29.4 8.8 68 22-105 2-70 (221)
480 3qiv_A Short-chain dehydrogena 89.3 3.3 0.00011 30.1 9.2 83 19-104 8-94 (253)
481 3cnb_A DNA-binding response re 89.2 3.1 0.00011 26.8 10.3 80 44-130 8-92 (143)
482 3is3_A 17BETA-hydroxysteroid d 89.2 5.3 0.00018 29.4 16.3 111 18-131 16-153 (270)
483 3sju_A Keto reductase; short-c 89.2 2.8 9.6E-05 31.2 8.9 85 18-105 22-110 (279)
484 1tmy_A CHEY protein, TMY; chem 89.1 2.8 9.4E-05 26.1 9.2 78 45-129 3-82 (120)
485 2gdz_A NAD+-dependent 15-hydro 89.0 5.3 0.00018 29.3 11.1 86 19-105 6-95 (267)
486 3cg4_A Response regulator rece 88.8 3.3 0.00011 26.7 11.0 79 44-130 7-89 (142)
487 3iup_A Putative NADPH:quinone 88.8 0.76 2.6E-05 36.1 5.7 76 18-103 169-247 (379)
488 3r1i_A Short-chain type dehydr 88.7 3.5 0.00012 30.7 9.1 85 18-105 30-118 (276)
489 3r6d_A NAD-dependent epimerase 88.7 1.5 5.1E-05 31.2 6.8 73 21-106 6-83 (221)
490 1zud_1 Adenylyltransferase THI 88.6 5.6 0.00019 29.3 10.1 80 19-105 27-127 (251)
491 3tri_A Pyrroline-5-carboxylate 88.6 1.1 3.7E-05 33.7 6.2 88 20-127 3-95 (280)
492 3tjr_A Short chain dehydrogena 88.5 6.4 0.00022 29.6 14.3 85 18-105 29-117 (301)
493 1bg6_A N-(1-D-carboxylethyl)-L 88.5 3.2 0.00011 31.9 9.1 98 20-129 4-108 (359)
494 2gn4_A FLAA1 protein, UDP-GLCN 88.5 1.3 4.5E-05 34.1 6.8 77 18-105 19-100 (344)
495 3nmy_A Xometc, cystathionine g 88.4 6 0.00021 31.2 10.7 121 4-132 66-191 (400)
496 3d4o_A Dipicolinate synthase s 88.4 6.6 0.00022 29.5 10.8 88 18-127 153-241 (293)
497 3ri6_A O-acetylhomoserine sulf 88.4 8.4 0.00029 30.7 11.7 123 4-133 81-207 (430)
498 1wwk_A Phosphoglycerate dehydr 88.3 2.4 8.2E-05 32.4 8.1 86 19-127 141-229 (307)
499 3rkr_A Short chain oxidoreduct 88.3 3.2 0.00011 30.5 8.6 85 18-105 27-115 (262)
500 3a10_A Response regulator; pho 88.2 3.1 0.00011 25.7 9.8 77 46-130 3-81 (116)
No 1
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=100.00 E-value=6.2e-34 Score=215.64 Aligned_cols=180 Identities=40% Similarity=0.713 Sum_probs=161.5
Q ss_pred CCCCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCc
Q 029836 1 MMTSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA 80 (187)
Q Consensus 1 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~ 80 (187)
|++++++++++..++...++++|||||||+|++++++++.++++++|+++|+++++++.|+++++..++.++++++++|+
T Consensus 42 ~~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda 121 (242)
T 3r3h_A 42 MQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPA 121 (242)
T ss_dssp TSCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCH
T ss_pred CccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 57899999999999999999999999999999999999988767999999999999999999999999988999999999
Q ss_pred hHHHHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCcCCCccccCCCCCCchhhhhhHHHHHHHHH
Q 029836 81 LPLLDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDFVQELN 160 (187)
Q Consensus 81 ~~~l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (187)
.+.++.+.+.+ ..++||+||+|++...+..+++.+.++|+|||+|+++|+.|.|.+.++...+ .....+++|+
T Consensus 122 ~~~l~~~~~~~-~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~------~~~~~~~~~~ 194 (242)
T 3r3h_A 122 LDTLHSLLNEG-GEHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTS------GQTREIKKLN 194 (242)
T ss_dssp HHHHHHHHHHH-CSSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCC------HHHHHHHHHH
T ss_pred HHHHHHHhhcc-CCCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEECCccCCcccCccccC------hHHHHHHHHH
Confidence 98877653221 0268999999999888999999999999999999999999999988776543 3456899999
Q ss_pred HHHhcCCCeeEEEeecCCeeEEEEEcC
Q 029836 161 KALAVDPRIEICQISIADGVTLCRRIG 187 (187)
Q Consensus 161 ~~~~~~~~~~~~~~p~~~G~~i~~k~~ 187 (187)
+.+..++++..+++|+++|+.+++|++
T Consensus 195 ~~l~~~~~~~~~~lp~~dG~~~~~k~~ 221 (242)
T 3r3h_A 195 QVIKNDSRVFVSLLAIADGMFLVQPIA 221 (242)
T ss_dssp HHHHTCCSEEEEEESSSSCEEEEEEC-
T ss_pred HHHhhCCCEEEEEEEccCceEEEEEcC
Confidence 999999999999999999999999974
No 2
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=7.9e-34 Score=212.31 Aligned_cols=173 Identities=14% Similarity=0.273 Sum_probs=157.5
Q ss_pred CCCHHHHHHHHHHHhhcCCC---EEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCC-CceEEEe
Q 029836 2 MTSPDEAQFFSMLLKLINAK---NTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVA-HKIDFRE 77 (187)
Q Consensus 2 ~~~~~~~~~l~~l~~~~~~~---~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~-~~i~~~~ 77 (187)
.+++.+++++..++...+++ +|||||||+|+++.++++.++++++|+++|+++++++.|+++++..++. +++++++
T Consensus 36 ~i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~ 115 (221)
T 3dr5_A 36 APDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLL 115 (221)
T ss_dssp CCCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred CCCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEE
Confidence 46899999999999998888 9999999999999999998876799999999999999999999999997 7999999
Q ss_pred CCchHHHHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCcCCCccccCCCCCCchhhhhhHHHHHH
Q 029836 78 GPALPLLDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDFVQ 157 (187)
Q Consensus 78 ~d~~~~l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (187)
+|+.+.++.+. .++||+||+|++...+..+++.+.++|+|||+++++|+.|.|.+.++...+ .....++
T Consensus 116 gda~~~l~~~~-----~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~------~~~~~~~ 184 (221)
T 3dr5_A 116 SRPLDVMSRLA-----NDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLADALLDGTIADQTRKD------RDTQAAR 184 (221)
T ss_dssp SCHHHHGGGSC-----TTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCC------HHHHHHH
T ss_pred cCHHHHHHHhc-----CCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCC------hHHHHHH
Confidence 99998876542 468999999999899999999999999999999999999999987775543 3445789
Q ss_pred HHHHHHhcCCCeeEEEeecCCeeEEEEE
Q 029836 158 ELNKALAVDPRIEICQISIADGVTLCRR 185 (187)
Q Consensus 158 ~~~~~~~~~~~~~~~~~p~~~G~~i~~k 185 (187)
+|++.+..+++++.+++|+|+|+.+++|
T Consensus 185 ~~~~~l~~~~~~~~~~lp~gdGl~~~~~ 212 (221)
T 3dr5_A 185 DADEYIRSIEGAHVARLPLGAGLTVVTK 212 (221)
T ss_dssp HHHHHHTTCTTEEEEEESSTTCEEEEEE
T ss_pred HHHHHHhhCCCeeEEEeeccchHHHHHH
Confidence 9999999999999999999999999997
No 3
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=100.00 E-value=9.3e-33 Score=208.54 Aligned_cols=185 Identities=58% Similarity=0.975 Sum_probs=162.8
Q ss_pred CCCCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCc
Q 029836 1 MMTSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA 80 (187)
Q Consensus 1 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~ 80 (187)
|++++++++++..++...++++|||||||+|+++.++++.++++++++++|+++++++.|+++++..++.++++++++|+
T Consensus 52 ~~~~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda 131 (237)
T 3c3y_A 52 MSTSPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDA 131 (237)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred CCcCHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 46789999999999999999999999999999999999998767999999999999999999999999877899999999
Q ss_pred hHHHHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCcCCCccccCCCCCCchhhhhhHHHHHHHHH
Q 029836 81 LPLLDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDFVQELN 160 (187)
Q Consensus 81 ~~~l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (187)
.+.++.+...+...++||+||+|+++..+..+++.+.++|+|||+++++|+.|.|.+..+.... .+..+.....+++|+
T Consensus 132 ~~~l~~l~~~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~~~~~g~~~~~~~~~-~~~~r~~~~~i~~~~ 210 (237)
T 3c3y_A 132 MLALDNLLQGQESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDNTLWGGTVAQPESEV-PDFMKENREAVIELN 210 (237)
T ss_dssp HHHHHHHHHSTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECTTGGGGGGSCGGGS-CGGGHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEecCCcCCccCCCcccc-hhhHHHHHHHHHHHH
Confidence 9887765322100368999999999889999999999999999999999999999887663321 224456778899999
Q ss_pred HHHhcCCCeeEEEeecCCeeEEEEEc
Q 029836 161 KALAVDPRIEICQISIADGVTLCRRI 186 (187)
Q Consensus 161 ~~~~~~~~~~~~~~p~~~G~~i~~k~ 186 (187)
+.+..++++..+++|+++|+.+++|+
T Consensus 211 ~~l~~~~~~~~~~lp~~dG~~~~~~~ 236 (237)
T 3c3y_A 211 KLLAADPRIEIVHLPLGDGITFCRRL 236 (237)
T ss_dssp HHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHhcCCCeEEEEEEeCCceEEEEEc
Confidence 99999999999999999999999986
No 4
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=100.00 E-value=7.5e-33 Score=210.26 Aligned_cols=186 Identities=79% Similarity=1.283 Sum_probs=162.6
Q ss_pred CCCCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCc
Q 029836 1 MMTSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA 80 (187)
Q Consensus 1 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~ 80 (187)
|++++.+++++..++...++++|||||||+|+++.++++.++++++++++|+++.+++.|+++++..++.++++++++|+
T Consensus 61 ~~~~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda 140 (247)
T 1sui_A 61 MTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPA 140 (247)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred CCcCHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH
Confidence 56889999999999999999999999999999999999998767899999999999999999999999878999999999
Q ss_pred hHHHHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCcCCCccccCCCCCCchhhhhhHHHHHHHHH
Q 029836 81 LPLLDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDFVQELN 160 (187)
Q Consensus 81 ~~~l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (187)
.+.++.+...+...++||+||+|++...+..+++.+.++|+|||+++++|++|.|.+..+.........+.....+++|+
T Consensus 141 ~~~l~~l~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~i~~~~ 220 (247)
T 1sui_A 141 LPVLDEMIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELN 220 (247)
T ss_dssp HHHHHHHHHSGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEECTTGGGGGGCCTTSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEecCCcCCcccCCCccchhhhhhHHHHHHHHHH
Confidence 98877653211003689999999988889999999999999999999999999999887754322222245678899999
Q ss_pred HHHhcCCCeeEEEeecCCeeEEEEEc
Q 029836 161 KALAVDPRIEICQISIADGVTLCRRI 186 (187)
Q Consensus 161 ~~~~~~~~~~~~~~p~~~G~~i~~k~ 186 (187)
+.+..++++...++|+++|+.+++|+
T Consensus 221 ~~l~~~~~~~~~~lp~~dG~~l~~k~ 246 (247)
T 1sui_A 221 KALAVDPRIEICMLPVGDGITICRRI 246 (247)
T ss_dssp HHHHTCTTBCCEEECSTTCEEEECBC
T ss_pred HHHhhCCCeEEEEEecCCccEEEEEc
Confidence 99999999999999999999999986
No 5
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=100.00 E-value=5.9e-32 Score=202.10 Aligned_cols=180 Identities=34% Similarity=0.592 Sum_probs=160.7
Q ss_pred CCCCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCc
Q 029836 1 MMTSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA 80 (187)
Q Consensus 1 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~ 80 (187)
|++++..++++..++...++.+|||+|||+|.++.++++.++++++|+++|+++.+++.++++++..++.++++++++|+
T Consensus 46 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 125 (225)
T 3tr6_A 46 MQTAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPA 125 (225)
T ss_dssp GSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCH
Confidence 46789999999999999999999999999999999999988767899999999999999999999999988899999999
Q ss_pred hHHHHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCcCCCccccCCCCCCchhhhhhHHHHHHHHH
Q 029836 81 LPLLDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDFVQELN 160 (187)
Q Consensus 81 ~~~l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (187)
.+.++...... ..++||+|++|++...+..+++.+.++|+|||+++++|+.|.|.+..+.... .....+++|+
T Consensus 126 ~~~~~~~~~~~-~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~------~~~~~~~~~~ 198 (225)
T 3tr6_A 126 KDTLAELIHAG-QAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQS------ENNQLIRLFN 198 (225)
T ss_dssp HHHHHHHHTTT-CTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCC------HHHHHHHHHH
T ss_pred HHHHHHhhhcc-CCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccC------hHHHHHHHHH
Confidence 88877653210 0168999999998888999999999999999999999999999887776543 3456889999
Q ss_pred HHHhcCCCeeEEEeecCCeeEEEEEcC
Q 029836 161 KALAVDPRIEICQISIADGVTLCRRIG 187 (187)
Q Consensus 161 ~~~~~~~~~~~~~~p~~~G~~i~~k~~ 187 (187)
+.+..++++..+++|+++|+.+++|+|
T Consensus 199 ~~l~~~~~~~~~~lp~~dG~~~~~k~~ 225 (225)
T 3tr6_A 199 QKVYKDERVDMILIPIGDGLTLARKKS 225 (225)
T ss_dssp HHHHHCTTEEEEEECSTTCEEEEEECC
T ss_pred HHHhcCCCeEEEEEEcCCccEEEEECC
Confidence 999999999999999999999999987
No 6
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=100.00 E-value=1.3e-31 Score=201.52 Aligned_cols=177 Identities=21% Similarity=0.277 Sum_probs=158.8
Q ss_pred CCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchH
Q 029836 3 TSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP 82 (187)
Q Consensus 3 ~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~ 82 (187)
+.+...+++..++...++.+|||||||+|.++.++++..+ +.+|+++|+++.+++.|+++++..++.++++++++|+.+
T Consensus 55 ~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 133 (232)
T 3ntv_A 55 VDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALE 133 (232)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCT-TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGG
T ss_pred cCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHH
Confidence 5788999999999999999999999999999999998665 789999999999999999999999987899999999998
Q ss_pred HHH-HHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCcCCCccccCCCCCCchhhhhhHHHHHHHHHH
Q 029836 83 LLD-QLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDFVQELNK 161 (187)
Q Consensus 83 ~l~-~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (187)
.++ .. .++||+||++.+...+..+++.+.++|+|||+++++|+.|.|.+..+... .++........+++|++
T Consensus 134 ~~~~~~------~~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d~~~~~g~v~~~~~~-~~~~~~~~~~~~~~~~~ 206 (232)
T 3ntv_A 134 QFENVN------DKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIGIV-RSRNVRQMVKKVQDYNE 206 (232)
T ss_dssp CHHHHT------TSCEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEECTTGGGGGGCGGGG-GCHHHHHHHHHHHHHHH
T ss_pred HHHhhc------cCCccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEeeCCcCccccCcccc-cchhhhHHHHHHHHHHH
Confidence 877 55 57899999999988999999999999999999999999999988766441 12344566788999999
Q ss_pred HHhcCCCeeEEEeecCCeeEEEEEcC
Q 029836 162 ALAVDPRIEICQISIADGVTLCRRIG 187 (187)
Q Consensus 162 ~~~~~~~~~~~~~p~~~G~~i~~k~~ 187 (187)
.+..++++...++|+++|+.+++|+|
T Consensus 207 ~l~~~~~~~~~~lp~~dG~~i~~k~~ 232 (232)
T 3ntv_A 207 WLIKQPGYTTNFLNIDDGLAISIKGE 232 (232)
T ss_dssp HHHTCTTEEEEEECSTTCEEEEEEC-
T ss_pred HHhcCCCeEEEEEEcCCceEEEEECC
Confidence 99999999999999999999999997
No 7
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=100.00 E-value=1.8e-31 Score=200.84 Aligned_cols=179 Identities=42% Similarity=0.659 Sum_probs=159.8
Q ss_pred CCCCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCc
Q 029836 1 MMTSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA 80 (187)
Q Consensus 1 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~ 80 (187)
|++++.+++++..++...++++|||||||+|+++.++++.++++++++++|+++.+++.|+++++..++.++++++++|+
T Consensus 54 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~ 133 (232)
T 3cbg_A 54 MQISPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPA 133 (232)
T ss_dssp GSCCHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH
T ss_pred cCcCHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 57899999999999998899999999999999999999988766899999999999999999999999877899999999
Q ss_pred hHHHHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCcCCCccccCCCCCCchhhhhhHHHHHHHHH
Q 029836 81 LPLLDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDFVQELN 160 (187)
Q Consensus 81 ~~~l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (187)
.+.++.+.... ..++||+||+|.+...+..+++.+.++|+|||+++++|+.|.|.+..+... ......+++|+
T Consensus 134 ~~~l~~l~~~~-~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~------~~~~~~~~~~~ 206 (232)
T 3cbg_A 134 LATLEQLTQGK-PLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQ------EAQTQVLQQFN 206 (232)
T ss_dssp HHHHHHHHTSS-SCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCC------SHHHHHHHHHH
T ss_pred HHHHHHHHhcC-CCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccC------ChHHHHHHHHH
Confidence 88777654210 016899999999888899999999999999999999999999998776543 35667899999
Q ss_pred HHHhcCCCeeEEEeecCCeeEEEEEc
Q 029836 161 KALAVDPRIEICQISIADGVTLCRRI 186 (187)
Q Consensus 161 ~~~~~~~~~~~~~~p~~~G~~i~~k~ 186 (187)
+.+..++++..+++|+++|+.+++|+
T Consensus 207 ~~l~~~~~~~~~~lp~~dG~~~~~~~ 232 (232)
T 3cbg_A 207 RDLAQDERVRISVIPLGDGMTLALKK 232 (232)
T ss_dssp HHHTTCTTEEEEEECSBTCEEEEEEC
T ss_pred HHHhhCCCeEEEEEEcCCeEEEEEeC
Confidence 99999999999999999999999985
No 8
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=100.00 E-value=1.1e-30 Score=194.95 Aligned_cols=178 Identities=27% Similarity=0.484 Sum_probs=160.0
Q ss_pred CCCCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCc
Q 029836 1 MMTSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA 80 (187)
Q Consensus 1 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~ 80 (187)
|++++..++++..++...++.+|||||||+|.++.++++.++++++++++|+++.+++.|+++++..++.++++++++|+
T Consensus 40 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 119 (223)
T 3duw_A 40 HDVSPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLA 119 (223)
T ss_dssp CSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 56789999999999999999999999999999999999998766899999999999999999999999988899999999
Q ss_pred hHHHHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCcCCCccccCCCCCCchhhhhhHHHHHHHHH
Q 029836 81 LPLLDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDFVQELN 160 (187)
Q Consensus 81 ~~~l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (187)
.+.++.+.... .++||+||+|+....+..+++.+.++|+|||+++++|+.|.|.+..+.... .....+++|+
T Consensus 120 ~~~~~~~~~~~--~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~------~~~~~~~~~~ 191 (223)
T 3duw_A 120 LDSLQQIENEK--YEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSND------PRVQGIRRFY 191 (223)
T ss_dssp HHHHHHHHHTT--CCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCC------HHHHHHHHHH
T ss_pred HHHHHHHHhcC--CCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccc------hHHHHHHHHH
Confidence 88877664321 257999999999888899999999999999999999999999887766543 4567889999
Q ss_pred HHHhcCCCeeEEEeec-----CCeeEEEEEc
Q 029836 161 KALAVDPRIEICQISI-----ADGVTLCRRI 186 (187)
Q Consensus 161 ~~~~~~~~~~~~~~p~-----~~G~~i~~k~ 186 (187)
+.+..++++...++|+ ++|+.+++++
T Consensus 192 ~~l~~~~~~~~~~~p~~~~~~~dG~~~~~~~ 222 (223)
T 3duw_A 192 ELIAAEPRVSATALQTVGSKGYDGFIMAVVK 222 (223)
T ss_dssp HHHHHCTTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred HHHhhCCCeEEEEEeccCCCCCCeeEEEEEe
Confidence 9999999999999999 9999999986
No 9
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=8.4e-31 Score=199.06 Aligned_cols=177 Identities=32% Similarity=0.514 Sum_probs=158.8
Q ss_pred CCCCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCc
Q 029836 1 MMTSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA 80 (187)
Q Consensus 1 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~ 80 (187)
|++++..++++..++...++++|||||||+|.++.++++.++++++|+++|+++.+++.|+++++..++.++++++++|+
T Consensus 45 ~~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~ 124 (248)
T 3tfw_A 45 HDVAANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPA 124 (248)
T ss_dssp CCCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred cccCHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 46789999999999999999999999999999999999988767899999999999999999999999988999999999
Q ss_pred hHHHHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCcCCCccccCCCCCCchhhhhhHHHHHHHHH
Q 029836 81 LPLLDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDFVQELN 160 (187)
Q Consensus 81 ~~~l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (187)
.+.++... ..++||+||+|.+...+..+++.+.++|+|||+|+++|+.|.|.+..+... ......+++|+
T Consensus 125 ~~~l~~~~----~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~------~~~~~~~~~~~ 194 (248)
T 3tfw_A 125 LQSLESLG----ECPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSA------DERVQGVRQFI 194 (248)
T ss_dssp HHHHHTCC----SCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCC------CHHHHHHHHHH
T ss_pred HHHHHhcC----CCCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeCCCcCCcccCcccc------chHHHHHHHHH
Confidence 88777651 024899999999988899999999999999999999999999988776654 35667899999
Q ss_pred HHHhcCCCeeEEEe-ecC----CeeEEEEEcC
Q 029836 161 KALAVDPRIEICQI-SIA----DGVTLCRRIG 187 (187)
Q Consensus 161 ~~~~~~~~~~~~~~-p~~----~G~~i~~k~~ 187 (187)
+.+..++++..+++ |++ +|+.+++|++
T Consensus 195 ~~l~~~~~~~~~~l~~~g~~~~DG~~i~~~~~ 226 (248)
T 3tfw_A 195 EMMGAEPRLTATALQTVGTKGWDGFTLAWVNA 226 (248)
T ss_dssp HHHHHCTTEEEEEEEECSTTCSEEEEEEEECC
T ss_pred HHHhhCCCEEEEEeecCCCCCCCeeEEEEEeC
Confidence 99999999998888 676 9999999985
No 10
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.98 E-value=2e-30 Score=194.29 Aligned_cols=179 Identities=39% Similarity=0.668 Sum_probs=159.2
Q ss_pred CCCCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCc
Q 029836 1 MMTSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA 80 (187)
Q Consensus 1 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~ 80 (187)
|.+++..++++..++...++++|||||||+|.++.++++.++++++++++|+++.+++.++++++..+..++++++++|+
T Consensus 51 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~ 130 (229)
T 2avd_A 51 SMMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPA 130 (229)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred CccCHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCH
Confidence 46788999999999999999999999999999999999988756899999999999999999999999888999999999
Q ss_pred hHHHHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCcCCCccccCCCCCCchhhhhhHHHHHHHHH
Q 029836 81 LPLLDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDFVQELN 160 (187)
Q Consensus 81 ~~~l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (187)
.+.++.+...+ ..++||+|++|++...+..+++.+.++|+|||+++++|+.|.|.+..+... ......+++|+
T Consensus 131 ~~~~~~~~~~~-~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~------~~~~~~~~~~~ 203 (229)
T 2avd_A 131 LETLDELLAAG-EAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKG------DVAAECVRNLN 203 (229)
T ss_dssp HHHHHHHHHTT-CTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTT------CHHHHHHHHHH
T ss_pred HHHHHHHHhcC-CCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECCCcCCcccCcccC------ChHHHHHHHHH
Confidence 88777653210 016899999999888899999999999999999999999999988776543 35677899999
Q ss_pred HHHhcCCCeeEEEeecCCeeEEEEEc
Q 029836 161 KALAVDPRIEICQISIADGVTLCRRI 186 (187)
Q Consensus 161 ~~~~~~~~~~~~~~p~~~G~~i~~k~ 186 (187)
+.+..++++..+++|+++|+.+++|+
T Consensus 204 ~~l~~~~~~~~~~lp~~dGl~~~~k~ 229 (229)
T 2avd_A 204 ERIRRDVRVYISLLPLGDGLTLAFKI 229 (229)
T ss_dssp HHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHhhCCCEEEEEEecCCceEEEEEC
Confidence 99999999999999999999999985
No 11
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.97 E-value=1.4e-29 Score=187.53 Aligned_cols=172 Identities=17% Similarity=0.236 Sum_probs=146.9
Q ss_pred CCCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCch
Q 029836 2 MTSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPAL 81 (187)
Q Consensus 2 ~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~ 81 (187)
.+++....++..++...++++|||||||+|.++.++++.++++++++++|+++.+++.|+++++..++.++++++++|+.
T Consensus 39 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 118 (210)
T 3c3p_A 39 IVDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPL 118 (210)
T ss_dssp CCCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHH
T ss_pred CcCHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHH
Confidence 36788999999998888999999999999999999999887568999999999999999999999888778999999998
Q ss_pred HHHHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCcCCCccccCCCCCCchhhhhhHHHHHHHHHH
Q 029836 82 PLLDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDFVQELNK 161 (187)
Q Consensus 82 ~~l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (187)
+.++.. .+ ||+|++|.....+..+++.+.++|+|||+++++|+.|.|.+..+ . .......+++|++
T Consensus 119 ~~~~~~------~~-fD~v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~-~------~~~~~~~~~~~~~ 184 (210)
T 3c3p_A 119 GIAAGQ------RD-IDILFMDCDVFNGADVLERMNRCLAKNALLIAVNALRRGSVAES-H------EDPETAALREFNH 184 (210)
T ss_dssp HHHTTC------CS-EEEEEEETTTSCHHHHHHHHGGGEEEEEEEEEESSSSCC-------------------CCCHHHH
T ss_pred HHhccC------CC-CCEEEEcCChhhhHHHHHHHHHhcCCCeEEEEECccccCcccCc-c------cchHHHHHHHHHH
Confidence 776544 45 99999998888899999999999999999999999998876533 1 1344566788999
Q ss_pred HHhcCCCeeEEEeecCCeeEEEEEcC
Q 029836 162 ALAVDPRIEICQISIADGVTLCRRIG 187 (187)
Q Consensus 162 ~~~~~~~~~~~~~p~~~G~~i~~k~~ 187 (187)
.+..++++....+|+++|+.+++|+|
T Consensus 185 ~l~~~~~~~~~~~p~~~G~~~~~~~~ 210 (210)
T 3c3p_A 185 HLSRRRDFFTTIVPVGNGVLLGYRLS 210 (210)
T ss_dssp HHTTCTTEEEEEECSTTCEEEEEECC
T ss_pred HHhhCCCeEEEEEecCCceEEEEeCC
Confidence 99999999999999999999999986
No 12
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.97 E-value=2e-28 Score=184.85 Aligned_cols=180 Identities=38% Similarity=0.601 Sum_probs=157.5
Q ss_pred CCCCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCc
Q 029836 1 MMTSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA 80 (187)
Q Consensus 1 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~ 80 (187)
|.+++...+++..++...++++|||||||+|.++.++++.++++++++++|+++.+++.|+++++..+..++++++++|+
T Consensus 42 ~~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~ 121 (239)
T 2hnk_A 42 MQISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSA 121 (239)
T ss_dssp CSCCHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCH
Confidence 57889999999999999999999999999999999999988756899999999999999999999998877799999999
Q ss_pred hHHHHHHhhc--------ccCC--CceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCcCCCccccCCCCCCchhhhh
Q 029836 81 LPLLDQLIQD--------EKYH--GTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFL 150 (187)
Q Consensus 81 ~~~l~~~~~~--------~~~~--~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~ 150 (187)
.+.++.+... .... ++||+|+++.....+..+++.+.++|+|||+++++++.|.|.+..+... .
T Consensus 122 ~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~------~ 195 (239)
T 2hnk_A 122 LETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQ------E 195 (239)
T ss_dssp HHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCC------C
T ss_pred HHHHHHHHhhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEccccCCcccCcccc------c
Confidence 8876654211 0001 6899999998888889999999999999999999999999987766543 3
Q ss_pred hHHHHHHHHHHHHhcCCCeeEEEeecCCeeEEEEEc
Q 029836 151 YLRDFVQELNKALAVDPRIEICQISIADGVTLCRRI 186 (187)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~G~~i~~k~ 186 (187)
.....+++|++.+..++++...++|+++|+.+++|+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~ 231 (239)
T 2hnk_A 196 PSTVGIRKFNELVYNDSLVDVSLVPIADGVSLVRKR 231 (239)
T ss_dssp HHHHHHHHHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred hHHHHHHHHHHHHhhCCCeEEEEEEcCCceEeeeeh
Confidence 566788999999999999999999999999999986
No 13
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.96 E-value=4.4e-28 Score=180.90 Aligned_cols=165 Identities=22% Similarity=0.358 Sum_probs=141.7
Q ss_pred CCCCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCc
Q 029836 1 MMTSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA 80 (187)
Q Consensus 1 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~ 80 (187)
|+++++.++++..++...++++|||||||+|.++.++++.++++++|+++|+++.+++.|+++++..++.++++++++|+
T Consensus 40 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 119 (221)
T 3u81_A 40 MNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGAS 119 (221)
T ss_dssp GGCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCH
Confidence 56889999999999999999999999999999999999987667899999999999999999999999977899999999
Q ss_pred hHHHHHHhhcccCCCceeEEEEcCCCcccHH---HHHHHHhcccCCeEEEEeCcCCCccccCCCCCCchhhhhhHHHHHH
Q 029836 81 LPLLDQLIQDEKYHGTFDFVFVDADKDNYVN---YHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDFVQ 157 (187)
Q Consensus 81 ~~~l~~~~~~~~~~~~~D~v~~d~~~~~~~~---~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (187)
.+.++.+.... ..++||+||+|+....+.. +++.+ ++|+|||+++++|+.+.+. .
T Consensus 120 ~~~l~~~~~~~-~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~~~~--------------------~ 177 (221)
T 3u81_A 120 QDLIPQLKKKY-DVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIVPGT--------------------P 177 (221)
T ss_dssp HHHGGGTTTTS-CCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCCCCC--------------------H
T ss_pred HHHHHHHHHhc-CCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCCcch--------------------H
Confidence 88776652110 0168999999998666654 45555 9999999999999987542 5
Q ss_pred HHHHHHhcCCCeeEEEee-------cCCeeEEEEEcC
Q 029836 158 ELNKALAVDPRIEICQIS-------IADGVTLCRRIG 187 (187)
Q Consensus 158 ~~~~~~~~~~~~~~~~~p-------~~~G~~i~~k~~ 187 (187)
+|.+.+..++++....+| .++|+.+++++|
T Consensus 178 ~~~~~l~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~g 214 (221)
T 3u81_A 178 DFLAYVRGSSSFECTHYSSYLEYMKVVDGLEKAIYQG 214 (221)
T ss_dssp HHHHHHHHCTTEEEEEEEEEETTTTEEEEEEEEEECC
T ss_pred HHHHHHhhCCCceEEEcccccccCCCCCceEEEEEeC
Confidence 677888899999999998 799999999986
No 14
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.95 E-value=2.5e-26 Score=172.54 Aligned_cols=178 Identities=25% Similarity=0.401 Sum_probs=139.0
Q ss_pred CCCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCch
Q 029836 2 MTSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPAL 81 (187)
Q Consensus 2 ~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~ 81 (187)
.+.+....++..++...++.+|||+|||+|.++..+++.++ +.+++++|+++.+++.|+++++..+..++++++++|+.
T Consensus 37 ~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 115 (233)
T 2gpy_A 37 IMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDAL 115 (233)
T ss_dssp CCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGG
T ss_pred CcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHH
Confidence 36788999999999888999999999999999999999886 68999999999999999999999998778999999998
Q ss_pred HHHHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCcCCCccccCCCCCCchhhhhhHHHHHHHHHH
Q 029836 82 PLLDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDFVQELNK 161 (187)
Q Consensus 82 ~~l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (187)
+.++.... .++||+|+++.....+..+++.+.++|+|||+++++|+.|.+.+..++.. .+........+++|+.
T Consensus 116 ~~~~~~~~----~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~ 189 (233)
T 2gpy_A 116 QLGEKLEL----YPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDNVLFRGLVAETDIE--HKRHKQLATKIDTYNQ 189 (233)
T ss_dssp GSHHHHTT----SCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEETTTC---------------------------C
T ss_pred HHHHhccc----CCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEcCCcCCccCCcccc--ccchhHHHHHHHHHHH
Confidence 86665421 35899999998877889999999999999999999999998876543321 1111233456778888
Q ss_pred HHhcCCCeeEEEeecCCeeEEEEEc
Q 029836 162 ALAVDPRIEICQISIADGVTLCRRI 186 (187)
Q Consensus 162 ~~~~~~~~~~~~~p~~~G~~i~~k~ 186 (187)
.+..++++...++|+++|+.+++|+
T Consensus 190 ~l~~~~~~~~~~~p~~dG~~~~~~~ 214 (233)
T 2gpy_A 190 WLLEHPQYDTRIFPVGDGIAISIKR 214 (233)
T ss_dssp TTTTCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHhCCCeEEEEEEcCCeEEEEEEc
Confidence 8999999999999999999999986
No 15
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.85 E-value=2.3e-20 Score=136.49 Aligned_cols=127 Identities=14% Similarity=0.079 Sum_probs=102.2
Q ss_pred CCCCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCC--CCceEEEeC
Q 029836 1 MMTSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGV--AHKIDFREG 78 (187)
Q Consensus 1 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~--~~~i~~~~~ 78 (187)
+.++++++++|+. ...++++|||||| |+|++++++. + +++|+++|.++++.+.|++++++.|+ .++++++.+
T Consensus 14 ~~v~~~~~~~L~~--~l~~a~~VLEiGt--GySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~g 87 (202)
T 3cvo_A 14 LTMPPAEAEALRM--AYEEAEVILEYGS--GGSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWT 87 (202)
T ss_dssp CCSCHHHHHHHHH--HHHHCSEEEEESC--SHHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEEC
T ss_pred ccCCHHHHHHHHH--HhhCCCEEEEECc--hHHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEe
Confidence 3578999999998 4457899999998 6899999984 4 69999999999999999999999998 789999999
Q ss_pred CchHH--------------HHHHhhcc---cCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCcCCCc
Q 029836 79 PALPL--------------LDQLIQDE---KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGG 135 (187)
Q Consensus 79 d~~~~--------------l~~~~~~~---~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~ 135 (187)
++.+. ++.+..+. ...++||+||+|+.+. ..++..+.++|++||+|++||+.+..
T Consensus 88 da~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~--~~~~~~~l~~l~~GG~Iv~DNv~~r~ 159 (202)
T 3cvo_A 88 DIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFR--VGCALATAFSITRPVTLLFDDYSQRR 159 (202)
T ss_dssp CCSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSH--HHHHHHHHHHCSSCEEEEETTGGGCS
T ss_pred CchhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCCc--hhHHHHHHHhcCCCeEEEEeCCcCCc
Confidence 96543 33322110 0136899999999754 47777788999999999999976543
No 16
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=99.83 E-value=4.5e-20 Score=141.58 Aligned_cols=162 Identities=17% Similarity=0.106 Sum_probs=126.4
Q ss_pred CCCHHHHHHHHHHHhh----cCCCEEEEEcccccHHHHHHHhhCC----CCCEEEEEeCCch------------------
Q 029836 2 MTSPDEAQFFSMLLKL----INAKNTMEIGVFTGYSLLATALAIP----DDGKILALDITKE------------------ 55 (187)
Q Consensus 2 ~~~~~~~~~l~~l~~~----~~~~~vLeiG~g~G~~~~~l~~~~~----~~~~v~~vd~~~~------------------ 55 (187)
+++++...+|+.++.. ..|.+|||+|++.|+++++++..++ ++.+++++|..+.
T Consensus 85 mv~~~r~~~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~ 164 (282)
T 2wk1_A 85 MIGIKRLENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALH 164 (282)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGG
T ss_pred ccCHHHHHHHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccc
Confidence 3567778888888765 4588999999999999999987663 2678999996421
Q ss_pred --------HHHHHHHHHHHcCCC-CceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCC-cccHHHHHHHHhcccCCeE
Q 029836 56 --------HYEKGLPIIQKAGVA-HKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADK-DNYVNYHKRLIELVKVGGV 125 (187)
Q Consensus 56 --------~~~~a~~~~~~~~~~-~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~-~~~~~~~~~~~~~L~~gG~ 125 (187)
.++.+++++++.|+. ++++++.|++.+.++.+. .++||+|++|+++ +.+..+++.+.++|+|||+
T Consensus 165 ~~~~~~~~~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~-----~~~~d~vfIDaD~y~~~~~~Le~~~p~L~pGGi 239 (282)
T 2wk1_A 165 RRNSVLAVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAP-----IDTLAVLRMDGDLYESTWDTLTNLYPKVSVGGY 239 (282)
T ss_dssp GGHHHHCCCHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCC-----CCCEEEEEECCCSHHHHHHHHHHHGGGEEEEEE
T ss_pred cccccchhHHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCC-----CCCEEEEEEcCCccccHHHHHHHHHhhcCCCEE
Confidence 467799999999984 899999999999888752 4689999999986 4578899999999999999
Q ss_pred EEEeCcCCCccccCCCCCCchhhhhhHHHHHHHHHHHHhcCCCeeEEEeecCCeeEEEEEcC
Q 029836 126 IGYDNTLWGGSVVAPPDADLDEHFLYLRDFVQELNKALAVDPRIEICQISIADGVTLCRRIG 187 (187)
Q Consensus 126 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~G~~i~~k~~ 187 (187)
|++||+.|. .....++++|++. .++...+.+++.+..+-+|.+
T Consensus 240 Iv~DD~~~~---------------~G~~~Av~Ef~~~----~~i~~~i~~~~~~~v~~rk~~ 282 (282)
T 2wk1_A 240 VIVDDYMMC---------------PPCKDAVDEYRAK----FDIADELITIDRDGVYWQRTR 282 (282)
T ss_dssp EEESSCTTC---------------HHHHHHHHHHHHH----TTCCSCCEECSSSCEEEECCC
T ss_pred EEEcCCCCC---------------HHHHHHHHHHHHh----cCCceEEEEecCEEEEEEeCC
Confidence 999998541 1334455555433 345667788888777777653
No 17
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.80 E-value=5.6e-19 Score=137.54 Aligned_cols=149 Identities=17% Similarity=0.256 Sum_probs=115.1
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHH--cCC-CCceEEEeCCchHHHHHHhhcccC
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQK--AGV-AHKIDFREGPALPLLDQLIQDEKY 93 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~--~~~-~~~i~~~~~d~~~~l~~~~~~~~~ 93 (187)
..++++|||||||+|..+.++++..+ ..+++++|+++.+++.|++++.. .++ .++++++.+|+.++++..
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~------ 165 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKHPS-VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQN------ 165 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTC------
T ss_pred CCCCCEEEEECCCchHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhC------
Confidence 35788999999999999999998644 68999999999999999999876 333 478999999998877643
Q ss_pred CCceeEEEEcCCCc-------ccHHHHHHHHhcccCCeEEEEeCc-CCCccccCCCCCCchhhhhhHHHHHHHHHHHHhc
Q 029836 94 HGTFDFVFVDADKD-------NYVNYHKRLIELVKVGGVIGYDNT-LWGGSVVAPPDADLDEHFLYLRDFVQELNKALAV 165 (187)
Q Consensus 94 ~~~~D~v~~d~~~~-------~~~~~~~~~~~~L~~gG~lv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (187)
.++||+|++|.... ....+++.+.++|+|||++++++. .|.. ......+.++++.+..
T Consensus 166 ~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~--------------~~~~~~~~~~l~~~f~ 231 (304)
T 2o07_A 166 QDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLH--------------LDLIKEMRQFCQSLFP 231 (304)
T ss_dssp SSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTC--------------HHHHHHHHHHHHHHCS
T ss_pred CCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccc--------------hHHHHHHHHHHHHhCC
Confidence 57899999997621 235789999999999999998762 2321 2344567777788887
Q ss_pred CCCeeEEEeec---C-CeeEEEEEc
Q 029836 166 DPRIEICQISI---A-DGVTLCRRI 186 (187)
Q Consensus 166 ~~~~~~~~~p~---~-~G~~i~~k~ 186 (187)
+..+....+|+ | .|+.++.|.
T Consensus 232 ~v~~~~~~vP~~~~g~~g~~~as~~ 256 (304)
T 2o07_A 232 VVAYAYCTIPTYPSGQIGFMLCSKN 256 (304)
T ss_dssp EEEEEEEECTTSGGGEEEEEEEESS
T ss_pred CceeEEEEeccccCcceEEEEEeCC
Confidence 77777777775 3 578888753
No 18
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.79 E-value=9.8e-19 Score=136.67 Aligned_cols=150 Identities=17% Similarity=0.211 Sum_probs=113.0
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHc--CC-CCceEEEeCCchHHHHHHhhcccC
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA--GV-AHKIDFREGPALPLLDQLIQDEKY 93 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~--~~-~~~i~~~~~d~~~~l~~~~~~~~~ 93 (187)
..++++|||||||+|.++.++++..+ ..+++++|+++.+++.|+++++.. ++ .++++++.+|+.++++..
T Consensus 106 ~~~~~~VLdIG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~------ 178 (314)
T 2b2c_A 106 HPDPKRVLIIGGGDGGILREVLKHES-VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNH------ 178 (314)
T ss_dssp SSSCCEEEEESCTTSHHHHHHTTCTT-CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHC------
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhc------
Confidence 45788999999999999999998644 689999999999999999998754 33 478999999998877652
Q ss_pred CCceeEEEEcCCC-----cc-c-HHHHHHHHhcccCCeEEEEeCcCCCccccCCCCCCchhhhhhHHHHHHHHHHHHhcC
Q 029836 94 HGTFDFVFVDADK-----DN-Y-VNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDFVQELNKALAVD 166 (187)
Q Consensus 94 ~~~~D~v~~d~~~-----~~-~-~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (187)
.++||+|++|... .. + ..+++.+.++|+|||++++++... .. .......+.++.+.+..+
T Consensus 179 ~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~-------~~------~~~~~~~~~~~l~~vF~~ 245 (314)
T 2b2c_A 179 KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESV-------WL------HLPLIAHLVAFNRKIFPA 245 (314)
T ss_dssp TTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEECCCT-------TT------CHHHHHHHHHHHHHHCSE
T ss_pred CCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCc-------cc------CHHHHHHHHHHHHHHCCc
Confidence 5789999998741 11 2 688999999999999999875211 00 023345566777777777
Q ss_pred CCeeEEEeec---CC-eeEEEEEc
Q 029836 167 PRIEICQISI---AD-GVTLCRRI 186 (187)
Q Consensus 167 ~~~~~~~~p~---~~-G~~i~~k~ 186 (187)
..+....+|+ |+ |+.++.|.
T Consensus 246 v~~~~~~iP~~~~g~~g~~~ask~ 269 (314)
T 2b2c_A 246 VTYAQSIVSTYPSGSMGYLICAKN 269 (314)
T ss_dssp EEEEEEECTTSGGGEEEEEEEESS
T ss_pred ceEEEEEecCcCCCceEEEEEeCC
Confidence 7777777775 45 78888764
No 19
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.78 E-value=1.1e-18 Score=131.29 Aligned_cols=116 Identities=19% Similarity=0.307 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhh---CCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCch
Q 029836 5 PDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALA---IPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPAL 81 (187)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~---~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~ 81 (187)
++...++..++...++.+|||||||+|+++..+++. +.++++|+++|+++++++.|+ +..++++++++|+.
T Consensus 67 p~~~~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~~~v~~~~gD~~ 140 (236)
T 2bm8_A 67 PDTQAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDMENITLHQGDCS 140 (236)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGCTTEEEEECCSS
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccCCceEEEECcch
Confidence 888889999888888999999999999999999987 344789999999999998876 12368999999997
Q ss_pred HH--HHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHh-cccCCeEEEEeCc
Q 029836 82 PL--LDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIE-LVKVGGVIGYDNT 131 (187)
Q Consensus 82 ~~--l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~-~L~~gG~lv~~~~ 131 (187)
+. ++... ..+||+|+++..+..+..++..+.+ +|+|||+++++++
T Consensus 141 ~~~~l~~~~-----~~~fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 141 DLTTFEHLR-----EMAHPLIFIDNAHANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp CSGGGGGGS-----SSCSSEEEEESSCSSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred hHHHHHhhc-----cCCCCEEEECCchHhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 64 33331 2379999999887788889999996 9999999999876
No 20
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.76 E-value=1.3e-17 Score=122.35 Aligned_cols=119 Identities=18% Similarity=0.134 Sum_probs=100.0
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 83 (187)
..+....+-..+...++.+|||+|||+|..+..+++..+ ..+++++|+++.+++.++++++..+. ++++++++|+.+.
T Consensus 25 ~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~ 102 (204)
T 3e05_A 25 KQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMP-NGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEG 102 (204)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCT-TSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTT
T ss_pred hHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhh
Confidence 344545554555566778999999999999999999865 68999999999999999999999888 7899999999765
Q ss_pred HHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 84 LDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 84 l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
++. .++||+|+++........+++.+.+.|+|||.+++...
T Consensus 103 ~~~-------~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 103 LDD-------LPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp CTT-------SCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred hhc-------CCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence 442 36799999998766888999999999999999998654
No 21
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.76 E-value=5.9e-17 Score=117.60 Aligned_cols=107 Identities=12% Similarity=0.099 Sum_probs=90.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.|+++++..++ ++++++++|+.+..+... .++|
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~-----~~~f 114 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-G-AASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAAGT-----TSPV 114 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHHCC-----SSCC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-C-CCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhhcc-----CCCc
Confidence 57789999999999999988764 2 57899999999999999999999988 789999999988766542 4689
Q ss_pred eEEEEcCCC----cccHHHHHHHHh--cccCCeEEEEeCcC
Q 029836 98 DFVFVDADK----DNYVNYHKRLIE--LVKVGGVIGYDNTL 132 (187)
Q Consensus 98 D~v~~d~~~----~~~~~~~~~~~~--~L~~gG~lv~~~~~ 132 (187)
|+|+++.+. ......++.+.+ +|+|||++++....
T Consensus 115 D~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 115 DLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp SEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred cEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 999999763 336778888888 99999999986543
No 22
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.76 E-value=7.1e-18 Score=129.88 Aligned_cols=107 Identities=16% Similarity=0.107 Sum_probs=91.4
Q ss_pred HHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccC
Q 029836 14 LLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKY 93 (187)
Q Consensus 14 l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~ 93 (187)
++...++++|||||||+|..+..++...+ +++|+++|+++++++.|++++++.++ ++++++++|+.++ +
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~-ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l-~-------- 185 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHVY-GMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVI-D-------- 185 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHTT-CCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGG-G--------
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhC-C--------
Confidence 45667889999999999876544433444 68999999999999999999999998 8999999999764 2
Q ss_pred CCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 94 HGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 94 ~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.++||+|++.....+...+++.+.+.|||||.+++.+.
T Consensus 186 d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 186 GLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp GCCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CCCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 36899999988777888999999999999999999774
No 23
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.76 E-value=1.5e-17 Score=130.14 Aligned_cols=151 Identities=16% Similarity=0.119 Sum_probs=108.7
Q ss_pred hhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHc--C-C-CCceEEEeCCchHHHHHHhhcc
Q 029836 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA--G-V-AHKIDFREGPALPLLDQLIQDE 91 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~--~-~-~~~i~~~~~d~~~~l~~~~~~~ 91 (187)
...++++|||||||+|..+.++++..+ ..+++++|+++.+++.|++++... + . .++++++.+|+.++++..
T Consensus 74 ~~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~---- 148 (314)
T 1uir_A 74 THPEPKRVLIVGGGEGATLREVLKHPT-VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERT---- 148 (314)
T ss_dssp HSSCCCEEEEEECTTSHHHHHHTTSTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHC----
T ss_pred cCCCCCeEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhc----
Confidence 345788999999999999999998644 689999999999999999998752 2 2 368999999998877653
Q ss_pred cCCCceeEEEEcCCCcc----------cHHHHHHHHhcccCCeEEEEeCcCCCccccCCCCCCchhhhhhHHHHHHHHHH
Q 029836 92 KYHGTFDFVFVDADKDN----------YVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDFVQELNK 161 (187)
Q Consensus 92 ~~~~~~D~v~~d~~~~~----------~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (187)
.++||+|++|..... ..++++.+.+.|+|||++++.... .. +.. ......+.+..+
T Consensus 149 --~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~----~~-~~~-------~~~~~~~~~~l~ 214 (314)
T 1uir_A 149 --EERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGM----IL-LTH-------HRVHPVVHRTVR 214 (314)
T ss_dssp --CCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEE----EC-C----------CHHHHHHHHHH
T ss_pred --CCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccC----cc-ccC-------HHHHHHHHHHHH
Confidence 578999999976322 478999999999999999985211 00 000 122233444444
Q ss_pred HHhcCCCeeEEEeecCCe---eEEEEE
Q 029836 162 ALAVDPRIEICQISIADG---VTLCRR 185 (187)
Q Consensus 162 ~~~~~~~~~~~~~p~~~G---~~i~~k 185 (187)
.+..+..+....+|+.+| +.++.|
T Consensus 215 ~~F~~v~~~~~~vP~~~g~~~~~~as~ 241 (314)
T 1uir_A 215 EAFRYVRSYKNHIPGFFLNFGFLLASD 241 (314)
T ss_dssp TTCSEEEEEEEEEGGGTEEEEEEEEES
T ss_pred HHCCceEEEEEecCCCCCeEEEEEEEC
Confidence 444444455666787555 566655
No 24
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.75 E-value=1.1e-17 Score=123.97 Aligned_cols=168 Identities=14% Similarity=0.118 Sum_probs=116.0
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCC----ceEEEeCC
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAH----KIDFREGP 79 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~----~i~~~~~d 79 (187)
.+...+++..++...++.+|||+|||+|..+..+++..+ ..+++++|+++.+++.++++++..++.. +++++++|
T Consensus 14 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 92 (217)
T 3jwh_A 14 NQQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSF-FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGA 92 (217)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTT-CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECC
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCC-CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCC
Confidence 345566666677777889999999999999999998754 5799999999999999999998877753 89999999
Q ss_pred chHHHHHHhhcccCCCceeEEEEcCCC-----cccHHHHHHHHhcccCCeEEEEeCcCCCcccc--CCCCC--Cchhhhh
Q 029836 80 ALPLLDQLIQDEKYHGTFDFVFVDADK-----DNYVNYHKRLIELVKVGGVIGYDNTLWGGSVV--APPDA--DLDEHFL 150 (187)
Q Consensus 80 ~~~~l~~~~~~~~~~~~~D~v~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~--~~~~~--~~~~~~~ 150 (187)
.... +.. .++||+|++.... .....+++.+.+.|+|||++++......+... .+... .......
T Consensus 93 ~~~~-~~~------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (217)
T 3jwh_A 93 LTYQ-DKR------FHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFE 165 (217)
T ss_dssp TTSC-CGG------GCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSC
T ss_pred cccc-ccc------CCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccc
Confidence 7432 211 4689999987652 23468899999999999988875442111100 00000 0000001
Q ss_pred hHHHHHHHHHHHHhcCCCeeEEEeecCCe
Q 029836 151 YLRDFVQELNKALAVDPRIEICQISIADG 179 (187)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~G 179 (187)
.....++++.+.+....+|...+.++|+.
T Consensus 166 ~~~~~l~~~~~~~~~~~Gf~v~~~~~g~~ 194 (217)
T 3jwh_A 166 WTRSQFQNWANKITERFAYNVQFQPIGEA 194 (217)
T ss_dssp BCHHHHHHHHHHHHHHSSEEEEECCCSCC
T ss_pred cCHHHHHHHHHHHHHHcCceEEEEecCCc
Confidence 13345566666777777898888866543
No 25
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.75 E-value=2e-17 Score=122.54 Aligned_cols=168 Identities=16% Similarity=0.111 Sum_probs=114.3
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCC----ceEEEeCC
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAH----KIDFREGP 79 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~----~i~~~~~d 79 (187)
.+...+++..++...++.+|||+|||+|..+..+++..+ ..+++++|+++.+++.+++++...++.. +++++++|
T Consensus 14 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 92 (219)
T 3jwg_A 14 NQQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSS 92 (219)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTT-CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECC
T ss_pred hHHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCc
Confidence 345556666666677889999999999999999998754 5799999999999999999998777653 89999999
Q ss_pred chHHHHHHhhcccCCCceeEEEEcCCC---c--ccHHHHHHHHhcccCCeEEEEeCcCCCcccc--CCCCC--Cchhhhh
Q 029836 80 ALPLLDQLIQDEKYHGTFDFVFVDADK---D--NYVNYHKRLIELVKVGGVIGYDNTLWGGSVV--APPDA--DLDEHFL 150 (187)
Q Consensus 80 ~~~~l~~~~~~~~~~~~~D~v~~d~~~---~--~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~--~~~~~--~~~~~~~ 150 (187)
.... +.. .++||+|++.... . ....+++.+.+.|+|||+++.......+... .+... .......
T Consensus 93 ~~~~-~~~------~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (219)
T 3jwg_A 93 LVYR-DKR------FSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFE 165 (219)
T ss_dssp SSSC-CGG------GTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTS
T ss_pred cccc-ccc------cCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceee
Confidence 8432 211 4689999987652 1 2357899999999999988765433221111 00000 0000001
Q ss_pred hHHHHHHHHHHHHhcCCCeeEEEeecCCe
Q 029836 151 YLRDFVQELNKALAVDPRIEICQISIADG 179 (187)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~G 179 (187)
.....++++.+.+....+|...+.+++++
T Consensus 166 ~~~~~l~~~~~~l~~~~Gf~v~~~~~g~~ 194 (219)
T 3jwg_A 166 WTRKEFQTWAVKVAEKYGYSVRFLQIGEI 194 (219)
T ss_dssp BCHHHHHHHHHHHHHHHTEEEEEEEESCC
T ss_pred ecHHHHHHHHHHHHHHCCcEEEEEecCCc
Confidence 12345555556666666888877765543
No 26
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.75 E-value=1.2e-17 Score=119.67 Aligned_cols=117 Identities=16% Similarity=0.160 Sum_probs=94.0
Q ss_pred HHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHH
Q 029836 7 EAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQ 86 (187)
Q Consensus 7 ~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~ 86 (187)
....+-..+...++.+|||+|||+|..+..+++.++ ..+++++|+++.+++.++++++..+...++ ++++|..+.++.
T Consensus 13 ~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~ 90 (178)
T 3hm2_A 13 VRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTP-QTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDD 90 (178)
T ss_dssp HHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSS-SEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGG
T ss_pred HHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCC-CCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhc
Confidence 333344444455667999999999999999998875 689999999999999999999999886688 888988765553
Q ss_pred HhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 87 LIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 87 ~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
. .++||+|++...... ..+++.+.+.|+|||.+++....
T Consensus 91 ~------~~~~D~i~~~~~~~~-~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 91 V------PDNPDVIFIGGGLTA-PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp C------CSCCSEEEECC-TTC-TTHHHHHHHTCCTTCEEEEEECS
T ss_pred c------CCCCCEEEECCcccH-HHHHHHHHHhcCCCCEEEEEeec
Confidence 2 378999998875433 77899999999999999986543
No 27
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.75 E-value=5.2e-17 Score=119.53 Aligned_cols=116 Identities=17% Similarity=0.155 Sum_probs=96.1
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 83 (187)
.++....+-..+...++.+|||+|||+|..+..+++. +.+|+++|+++++++.|+++++..++..+++++++|+.+.
T Consensus 40 ~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 116 (204)
T 3njr_A 40 KSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA 116 (204)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG
T ss_pred cHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh
Confidence 4455555555556667789999999999999999986 5799999999999999999999999866899999999875
Q ss_pred HHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 84 LDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 84 l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
++. .++||+|+++... ... +++.+.+.|+|||.+++...
T Consensus 117 ~~~-------~~~~D~v~~~~~~-~~~-~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 117 LAD-------LPLPEAVFIGGGG-SQA-LYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp GTT-------SCCCSEEEECSCC-CHH-HHHHHHHHSCTTCEEEEEEC
T ss_pred ccc-------CCCCCEEEECCcc-cHH-HHHHHHHhcCCCcEEEEEec
Confidence 543 3579999998743 344 89999999999999998654
No 28
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.74 E-value=3.2e-17 Score=129.09 Aligned_cols=112 Identities=21% Similarity=0.319 Sum_probs=91.6
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHc--CC-CCceEEEeCCchHHHHHHhhcccC
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA--GV-AHKIDFREGPALPLLDQLIQDEKY 93 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~--~~-~~~i~~~~~d~~~~l~~~~~~~~~ 93 (187)
..++++|||||||+|.++.++++..+ ..+|+++|+++.+++.|++++... ++ .++++++++|+.++++...
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~-~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~----- 191 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHAS-IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAA----- 191 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSC-----
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhcc-----
Confidence 35688999999999999999998644 689999999999999999998753 33 3689999999988776431
Q ss_pred CCceeEEEEcCCC-----cc--cHHHHHHHHhcccCCeEEEEe-CcCCC
Q 029836 94 HGTFDFVFVDADK-----DN--YVNYHKRLIELVKVGGVIGYD-NTLWG 134 (187)
Q Consensus 94 ~~~~D~v~~d~~~-----~~--~~~~~~~~~~~L~~gG~lv~~-~~~~~ 134 (187)
.++||+|++|... .. ...+++.+.++|+|||+++++ +..|.
T Consensus 192 ~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 240 (334)
T 1xj5_A 192 EGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWL 240 (334)
T ss_dssp TTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTT
T ss_pred CCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCccc
Confidence 3689999998651 11 478999999999999999986 55554
No 29
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.74 E-value=4.3e-17 Score=125.65 Aligned_cols=148 Identities=11% Similarity=0.051 Sum_probs=107.7
Q ss_pred hhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHc--CC--------CCceEEEeCCchHHHH
Q 029836 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA--GV--------AHKIDFREGPALPLLD 85 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~--~~--------~~~i~~~~~d~~~~l~ 85 (187)
...++++|||||||+|..+.++++. + ..+++++|+++.+++.|++++ .. ++ .++++++.+|+.++++
T Consensus 72 ~~~~~~~VLdiG~G~G~~~~~l~~~-~-~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~ 148 (281)
T 1mjf_A 72 AHPKPKRVLVIGGGDGGTVREVLQH-D-VDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIK 148 (281)
T ss_dssp HSSCCCEEEEEECTTSHHHHHHTTS-C-CSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHH
T ss_pred hCCCCCeEEEEcCCcCHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhc
Confidence 3457889999999999999999987 5 689999999999999999998 44 32 4689999999988765
Q ss_pred HHhhcccCCCceeEEEEcCCC-----cc--cHHHHHHHHhcccCCeEEEEeCcCCCccccCCCCCCchhhhhhHHHHHHH
Q 029836 86 QLIQDEKYHGTFDFVFVDADK-----DN--YVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDFVQE 158 (187)
Q Consensus 86 ~~~~~~~~~~~~D~v~~d~~~-----~~--~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (187)
. .++||+|++|... .. ..++++.+.+.|+|||+++++... +.. .......+.+
T Consensus 149 ~-------~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~-------~~~------~~~~~~~~~~ 208 (281)
T 1mjf_A 149 N-------NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGS-------VYL------FTDELISAYK 208 (281)
T ss_dssp H-------CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEE-------TTT------SHHHHHHHHH
T ss_pred c-------cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC-------ccc------CHHHHHHHHH
Confidence 4 3589999999752 12 478899999999999999986311 000 0223334445
Q ss_pred HHHHHhcCCCeeEEEeecCCe---eEEEEEc
Q 029836 159 LNKALAVDPRIEICQISIADG---VTLCRRI 186 (187)
Q Consensus 159 ~~~~~~~~~~~~~~~~p~~~G---~~i~~k~ 186 (187)
..+.+..+..+....+|..+| +.++.|.
T Consensus 209 ~l~~~f~~v~~~~~~vP~~~g~~~~~~as~~ 239 (281)
T 1mjf_A 209 EMKKVFDRVYYYSFPVIGYASPWAFLVGVKG 239 (281)
T ss_dssp HHHHHCSEEEEEEECCTTSSSSEEEEEEEES
T ss_pred HHHHHCCceEEEEEecCCCCceEEEEEeeCC
Confidence 555555554455556676544 7777764
No 30
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.74 E-value=2.8e-17 Score=125.40 Aligned_cols=116 Identities=16% Similarity=0.224 Sum_probs=93.2
Q ss_pred HHHHHHHh--hcCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHH
Q 029836 9 QFFSMLLK--LINAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLD 85 (187)
Q Consensus 9 ~~l~~l~~--~~~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~ 85 (187)
+++..++. ..++.+|||+|||+|..+..+++.++ ++.+|+++|+++.+++.|+++++..+...+++++++|+.++ +
T Consensus 58 ~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~-~ 136 (261)
T 4gek_A 58 SMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDI-A 136 (261)
T ss_dssp HHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTC-C
T ss_pred HHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccc-c
Confidence 34444444 23567999999999999999998764 35799999999999999999999988888999999998754 2
Q ss_pred HHhhcccCCCceeEEEEcCC-----CcccHHHHHHHHhcccCCeEEEEeCcCC
Q 029836 86 QLIQDEKYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNTLW 133 (187)
Q Consensus 86 ~~~~~~~~~~~~D~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
.++||+|++... ..+...+++++.+.|||||++++.+...
T Consensus 137 --------~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 137 --------IENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp --------CCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred --------ccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 357999988654 1234568999999999999999876543
No 31
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.74 E-value=4.3e-17 Score=125.27 Aligned_cols=107 Identities=12% Similarity=0.149 Sum_probs=89.0
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHc--CC-CCceEEEeCCchHHHHHHhhcccC
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA--GV-AHKIDFREGPALPLLDQLIQDEKY 93 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~--~~-~~~i~~~~~d~~~~l~~~~~~~~~ 93 (187)
..++++|||||||+|..+.++++..+ ..++++||+++.+++.|++++... ++ .++++++.+|+.++++..
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~------ 145 (275)
T 1iy9_A 73 HPNPEHVLVVGGGDGGVIREILKHPS-VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKS------ 145 (275)
T ss_dssp SSSCCEEEEESCTTCHHHHHHTTCTT-CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTC------
T ss_pred CCCCCEEEEECCchHHHHHHHHhCCC-CceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC------
Confidence 35688999999999999999987643 589999999999999999998652 33 368999999999877643
Q ss_pred CCceeEEEEcCCCcc-------cHHHHHHHHhcccCCeEEEEeC
Q 029836 94 HGTFDFVFVDADKDN-------YVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 94 ~~~~D~v~~d~~~~~-------~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.++||+|++|..... ..++++.+.+.|+|||++++..
T Consensus 146 ~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 146 ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 578999999975211 2689999999999999999863
No 32
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.74 E-value=3.7e-17 Score=117.32 Aligned_cols=107 Identities=14% Similarity=0.142 Sum_probs=89.8
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCc
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGT 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~ 96 (187)
..++.+|||+|||+|..+..+++. + ..+++++|+++.+++.++++++..++.++++++++|+.+.++.. .++
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~------~~~ 100 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR-G-MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCL------TGR 100 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT-T-CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHB------CSC
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhh------cCC
Confidence 346789999999999999999876 3 57999999999999999999999888778999999998876654 567
Q ss_pred eeEEEEcCCC--cccHHHHHHHH--hcccCCeEEEEeCc
Q 029836 97 FDFVFVDADK--DNYVNYHKRLI--ELVKVGGVIGYDNT 131 (187)
Q Consensus 97 ~D~v~~d~~~--~~~~~~~~~~~--~~L~~gG~lv~~~~ 131 (187)
||+|+++.+. ......++.+. +.|+|||++++...
T Consensus 101 fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 101 FDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 9999998763 34556677776 89999999998644
No 33
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.73 E-value=1.8e-17 Score=124.69 Aligned_cols=109 Identities=17% Similarity=0.173 Sum_probs=89.1
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.++.+|||||||+|.++.++++..+ .++++||+++.+++.|+++.+..+ .+++++.+++.+....+. +++|
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~--~~~~~~~~~a~~~~~~~~-----~~~F 129 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLP-----DGHF 129 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSC-----TTCE
T ss_pred cCCCeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCC--CceEEEeehHHhhccccc-----ccCC
Confidence 3567999999999999999987643 689999999999999999888765 478999999987765553 5789
Q ss_pred eEEEEcCCC--------cccHHHHHHHHhcccCCeEEEEeCcCCCc
Q 029836 98 DFVFVDADK--------DNYVNYHKRLIELVKVGGVIGYDNTLWGG 135 (187)
Q Consensus 98 D~v~~d~~~--------~~~~~~~~~~~~~L~~gG~lv~~~~~~~~ 135 (187)
|.|+.|... .+...+++++.++|||||++++.+....+
T Consensus 130 D~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~~ 175 (236)
T 3orh_A 130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWG 175 (236)
T ss_dssp EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHH
T ss_pred ceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEecCCch
Confidence 999998651 23467889999999999999987754433
No 34
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.72 E-value=2.1e-16 Score=118.96 Aligned_cols=105 Identities=14% Similarity=0.156 Sum_probs=88.0
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..+..++...+ +.+|+++|+++.+++.++++++..++. +++++++|+.++.... . ..++|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~--~--~~~~f 142 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFP-HLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFGQRK--D--VRESY 142 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHTTCT--T--TTTCE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhcccc--c--ccCCc
Confidence 3678999999999999999997655 689999999999999999999998884 6999999997653100 0 03689
Q ss_pred eEEEEcCCCcccHHHHHHHHhcccCCeEEEEe
Q 029836 98 DFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 98 D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
|+|++... .+...+++.+.++|+|||++++.
T Consensus 143 D~V~~~~~-~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 143 DIVTARAV-ARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp EEEEEECC-SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred cEEEEecc-CCHHHHHHHHHHhcCCCCEEEEE
Confidence 99999874 56788999999999999999874
No 35
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.72 E-value=3e-16 Score=116.61 Aligned_cols=105 Identities=21% Similarity=0.301 Sum_probs=87.8
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCcee
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D 98 (187)
+..+|||||||+|.++..+++..+ +.+|+++|+++.+++.|+++++..++ .+++++++|+.+.++...+ .++||
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p-~~~v~giD~s~~~l~~a~~~~~~~~l-~nv~~~~~Da~~~l~~~~~----~~~~d 107 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRP-EQDFLGIEVHSPGVGACLASAHEEGL-SNLRVMCHDAVEVLHKMIP----DNSLR 107 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHTTC-SSEEEECSCHHHHHHHHSC----TTCEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCC-CCeEEEEEecHHHHHHHHHHHHHhCC-CcEEEEECCHHHHHHHHcC----CCChh
Confidence 467999999999999999999876 68999999999999999999999887 5799999999987765321 57899
Q ss_pred EEEEc---CCCc--c------cHHHHHHHHhcccCCeEEEEe
Q 029836 99 FVFVD---ADKD--N------YVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 99 ~v~~d---~~~~--~------~~~~~~~~~~~L~~gG~lv~~ 129 (187)
.|++. ++.. . ...+++.+.+.|||||++++.
T Consensus 108 ~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~ 149 (218)
T 3dxy_A 108 MVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMA 149 (218)
T ss_dssp EEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEE
Confidence 99985 2211 1 136999999999999999873
No 36
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.72 E-value=8.6e-17 Score=121.69 Aligned_cols=118 Identities=14% Similarity=0.212 Sum_probs=96.0
Q ss_pred HHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHH
Q 029836 6 DEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLD 85 (187)
Q Consensus 6 ~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~ 85 (187)
.....+...+...++.+|||+|||+|..+..+++.. +.+++++|+++.+++.++++++..++.+++++.++|+.+...
T Consensus 23 ~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 100 (256)
T 1nkv_A 23 EKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA 100 (256)
T ss_dssp HHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc
Confidence 333334344445567899999999999999999876 468999999999999999999999987799999999976422
Q ss_pred HHhhcccCCCceeEEEEcCC---CcccHHHHHHHHhcccCCeEEEEeCcCC
Q 029836 86 QLIQDEKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTLW 133 (187)
Q Consensus 86 ~~~~~~~~~~~~D~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
.++||+|++... ..+...+++.+.++|||||.+++.+..+
T Consensus 101 --------~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (256)
T 1nkv_A 101 --------NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYW 143 (256)
T ss_dssp --------SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEE
T ss_pred --------CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcc
Confidence 368999998654 3457889999999999999999976554
No 37
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.72 E-value=1.1e-16 Score=117.49 Aligned_cols=108 Identities=16% Similarity=0.102 Sum_probs=88.1
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCC-CceEEEeCCchHHHHHHhhcccCCCc
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVA-HKIDFREGPALPLLDQLIQDEKYHGT 96 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~-~~i~~~~~d~~~~l~~~~~~~~~~~~ 96 (187)
.++.+|||+|||+|..+..++... ..+|+++|+++.+++.|+++++..++. ++++++++|+.+.++... .++
T Consensus 52 ~~~~~vLDlGcGtG~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~-----~~~ 124 (201)
T 2ift_A 52 IHQSECLDGFAGSGSLGFEALSRQ--AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQ-----NQP 124 (201)
T ss_dssp HTTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCC-----SSC
T ss_pred cCCCeEEEcCCccCHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhc-----cCC
Confidence 477899999999999999877652 369999999999999999999998875 689999999987654321 357
Q ss_pred -eeEEEEcCC--CcccHHHHHHH--HhcccCCeEEEEeCcC
Q 029836 97 -FDFVFVDAD--KDNYVNYHKRL--IELVKVGGVIGYDNTL 132 (187)
Q Consensus 97 -~D~v~~d~~--~~~~~~~~~~~--~~~L~~gG~lv~~~~~ 132 (187)
||+|+++.+ .......++.+ .++|+|||++++....
T Consensus 125 ~fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 125 HFDVVFLDPPFHFNLAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp CEEEEEECCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred CCCEEEECCCCCCccHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 999999987 34456777777 5679999999886543
No 38
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.72 E-value=7.9e-17 Score=124.80 Aligned_cols=106 Identities=14% Similarity=0.105 Sum_probs=85.7
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcC----CCCceEEEeCCchHHHHHHhhccc
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAG----VAHKIDFREGPALPLLDQLIQDEK 92 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~----~~~~i~~~~~d~~~~l~~~~~~~~ 92 (187)
..++++|||||||+|..+.++++..+ ..+|++||+++.+++.|++++...+ ..++++++.+|+.++++..
T Consensus 81 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~----- 154 (294)
T 3adn_A 81 HGHAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT----- 154 (294)
T ss_dssp STTCCEEEEESCTTCHHHHHHHTCTT-CCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CC-----
T ss_pred CCCCCEEEEEeCChhHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhc-----
Confidence 45789999999999999999998644 6899999999999999999988652 2368999999998877642
Q ss_pred CCCceeEEEEcCCCc-------ccHHHHHHHHhcccCCeEEEEe
Q 029836 93 YHGTFDFVFVDADKD-------NYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 93 ~~~~~D~v~~d~~~~-------~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
.++||+|++|.... ...++++.+.+.|+|||++++.
T Consensus 155 -~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 197 (294)
T 3adn_A 155 -SQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp -CCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEE
T ss_pred -CCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEe
Confidence 57899999987521 1277999999999999999975
No 39
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.71 E-value=5.6e-16 Score=111.83 Aligned_cols=112 Identities=11% Similarity=0.112 Sum_probs=87.5
Q ss_pred HHHHHHHhh--cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHH
Q 029836 9 QFFSMLLKL--INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQ 86 (187)
Q Consensus 9 ~~l~~l~~~--~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~ 86 (187)
++...++.. .++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|+++++..++ +++++++++..+.. .
T Consensus 10 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~-~ 84 (185)
T 3mti_A 10 HMSHDFLAEVLDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLD-H 84 (185)
T ss_dssp HHHHHHHHTTCCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGG-G
T ss_pred HHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHH-h
Confidence 344444432 35689999999999999999976 58999999999999999999999888 78999997775432 2
Q ss_pred HhhcccCCCceeEEEEcC-C-----------CcccHHHHHHHHhcccCCeEEEEeC
Q 029836 87 LIQDEKYHGTFDFVFVDA-D-----------KDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 87 ~~~~~~~~~~~D~v~~d~-~-----------~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.. .++||+|+++. . .......++.+.+.|||||.+++..
T Consensus 85 ~~-----~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 135 (185)
T 3mti_A 85 YV-----REPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMI 135 (185)
T ss_dssp TC-----CSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hc-----cCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEE
Confidence 21 56899999873 2 1233467889999999999998753
No 40
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.71 E-value=1.6e-16 Score=123.32 Aligned_cols=106 Identities=14% Similarity=0.178 Sum_probs=87.2
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHH--cCC-CCceEEEeCCchHHHHHHhhcccC
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQK--AGV-AHKIDFREGPALPLLDQLIQDEKY 93 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~--~~~-~~~i~~~~~d~~~~l~~~~~~~~~ 93 (187)
..++++|||||||+|..+..+++..+ ..+++++|+++.+++.+++++.. .++ .++++++++|+.++++..
T Consensus 88 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------ 160 (296)
T 1inl_A 88 HPNPKKVLIIGGGDGGTLREVLKHDS-VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKF------ 160 (296)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTSTT-CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGC------
T ss_pred CCCCCEEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC------
Confidence 35678999999999999999998654 68999999999999999999865 233 368999999998776543
Q ss_pred CCceeEEEEcCCCc--------ccHHHHHHHHhcccCCeEEEEe
Q 029836 94 HGTFDFVFVDADKD--------NYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 94 ~~~~D~v~~d~~~~--------~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
.++||+|++|.... ....+++.+.+.|+|||++++.
T Consensus 161 ~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 204 (296)
T 1inl_A 161 KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE 204 (296)
T ss_dssp SSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 56899999987522 3378999999999999999985
No 41
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.71 E-value=3.2e-16 Score=113.04 Aligned_cols=109 Identities=16% Similarity=0.167 Sum_probs=89.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.|+++++..++.++++++++|+.+.++.+... .++|
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~f 117 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSR-G-MDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEE---KLQF 117 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHT---TCCE
T ss_pred cCCCCEEEeCCccCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhc---CCCC
Confidence 46789999999999999998874 3 47999999999999999999999888778999999998876544221 4689
Q ss_pred eEEEEcCC--CcccHHHHHHH--HhcccCCeEEEEeCc
Q 029836 98 DFVFVDAD--KDNYVNYHKRL--IELVKVGGVIGYDNT 131 (187)
Q Consensus 98 D~v~~d~~--~~~~~~~~~~~--~~~L~~gG~lv~~~~ 131 (187)
|+|+++.+ .......+..+ .++|+|||++++...
T Consensus 118 D~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 118 DLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCETD 155 (187)
T ss_dssp EEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 99999976 34456677777 788999999998643
No 42
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.71 E-value=4.8e-16 Score=112.18 Aligned_cols=118 Identities=18% Similarity=0.180 Sum_probs=98.9
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 83 (187)
......++...+...++.+|||+|||+|..+..+++.. .+++++|+++.+++.+++++...+..+++++.++|..+.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 94 (192)
T 1l3i_A 18 AMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEA 94 (192)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHH
T ss_pred hHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHh
Confidence 34555555555666678899999999999999998764 799999999999999999999988877899999998764
Q ss_pred HHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 84 LDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 84 l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
++. .++||+|+++........+++.+.++|+|||.+++...
T Consensus 95 ~~~-------~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 95 LCK-------IPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp HTT-------SCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ccc-------CCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 432 25899999988766788999999999999999998643
No 43
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.70 E-value=1.6e-16 Score=123.61 Aligned_cols=107 Identities=12% Similarity=0.073 Sum_probs=88.5
Q ss_pred hcCCC--EEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCC
Q 029836 17 LINAK--NTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYH 94 (187)
Q Consensus 17 ~~~~~--~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~ 94 (187)
...++ +|||||||.|..+.++++.++ +.++++||+++.+++.|++++.... .++++++++|+.+++.... .
T Consensus 85 ~p~p~~~rVLdIG~G~G~la~~la~~~p-~~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~~Da~~~l~~~~-----~ 157 (317)
T 3gjy_A 85 HQDASKLRITHLGGGACTMARYFADVYP-QSRNTVVELDAELARLSREWFDIPR-APRVKIRVDDARMVAESFT-----P 157 (317)
T ss_dssp HSCGGGCEEEEESCGGGHHHHHHHHHST-TCEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEESCHHHHHHTCC-----T
T ss_pred CCCCCCCEEEEEECCcCHHHHHHHHHCC-CcEEEEEECCHHHHHHHHHhccccC-CCceEEEECcHHHHHhhcc-----C
Confidence 34455 999999999999999999776 5799999999999999999886432 3689999999998876541 4
Q ss_pred CceeEEEEcCCCc-------ccHHHHHHHHhcccCCeEEEEeC
Q 029836 95 GTFDFVFVDADKD-------NYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 95 ~~~D~v~~d~~~~-------~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
++||+|++|.... ...++++.+.+.|+|||+++++.
T Consensus 158 ~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 158 ASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp TCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 6899999986411 13789999999999999999764
No 44
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.70 E-value=6.5e-16 Score=113.34 Aligned_cols=147 Identities=14% Similarity=0.181 Sum_probs=108.5
Q ss_pred HHHHHHHHHhh-cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHH
Q 029836 7 EAQFFSMLLKL-INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLD 85 (187)
Q Consensus 7 ~~~~l~~l~~~-~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~ 85 (187)
...++..+... .++.+|||+|||+|..+..+++. + ..+++++|+++.+++.|+++++..+..+ +++.++|..+..
T Consensus 47 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~- 122 (205)
T 3grz_A 47 TQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKL-G-AKSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLADV- 122 (205)
T ss_dssp HHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTTC-
T ss_pred HHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEeccccccC-
Confidence 34445555443 45689999999999999998874 3 5799999999999999999999988854 999999987542
Q ss_pred HHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCcCCCccccCCCCCCchhhhhhHHHHHHHHHHHHhc
Q 029836 86 QLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDFVQELNKALAV 165 (187)
Q Consensus 86 ~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (187)
.++||+|+++........+++.+.++|+|||.+++.+.... ....+.+.+.
T Consensus 123 --------~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~--------------------~~~~~~~~~~- 173 (205)
T 3grz_A 123 --------DGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSGIDYL--------------------QLPKIEQALA- 173 (205)
T ss_dssp --------CSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEEEEGG--------------------GHHHHHHHHH-
T ss_pred --------CCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEecCcc--------------------cHHHHHHHHH-
Confidence 46899999988766677888899999999999998654321 1122333333
Q ss_pred CCCeeEEE-eecCCeeEEEEEc
Q 029836 166 DPRIEICQ-ISIADGVTLCRRI 186 (187)
Q Consensus 166 ~~~~~~~~-~p~~~G~~i~~k~ 186 (187)
..+|.... ...+.+..+..++
T Consensus 174 ~~Gf~~~~~~~~~~w~~~~~~~ 195 (205)
T 3grz_A 174 ENSFQIDLKMRAGRWIGLAISR 195 (205)
T ss_dssp HTTEEEEEEEEETTEEEEEEEE
T ss_pred HcCCceEEeeccCCEEEEEEec
Confidence 33555443 4467777777765
No 45
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.70 E-value=1.8e-15 Score=114.88 Aligned_cols=147 Identities=18% Similarity=0.170 Sum_probs=107.9
Q ss_pred HHHHHHHHHHhh-cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHH
Q 029836 6 DEAQFFSMLLKL-INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL 84 (187)
Q Consensus 6 ~~~~~l~~l~~~-~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l 84 (187)
.+...+..+... .++.+|||+|||+|..+..+++. . .+++++|+++.+++.++++++.++.. +++.++|..+.+
T Consensus 106 tt~~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~-g--~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~~ 180 (254)
T 2nxc_A 106 TTRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKL-G--GKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAAL 180 (254)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHT-T--CEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHHG
T ss_pred HHHHHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHh-C--CeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhcC
Confidence 334445555443 45789999999999999998875 2 39999999999999999999998874 899999987653
Q ss_pred HHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCcCCCccccCCCCCCchhhhhhHHHHHHHHHHHHh
Q 029836 85 DQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDFVQELNKALA 164 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (187)
+ .++||+|+++........++..+.++|+|||++++.+.... ....+.+.+.
T Consensus 181 ~--------~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~~~~--------------------~~~~v~~~l~ 232 (254)
T 2nxc_A 181 P--------FGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGILKD--------------------RAPLVREAMA 232 (254)
T ss_dssp G--------GCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEEGG--------------------GHHHHHHHHH
T ss_pred c--------CCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEeeccC--------------------CHHHHHHHHH
Confidence 2 45899999987655667889999999999999998755421 1123333343
Q ss_pred cCCCeeE-EEeecCCeeEEEEEc
Q 029836 165 VDPRIEI-CQISIADGVTLCRRI 186 (187)
Q Consensus 165 ~~~~~~~-~~~p~~~G~~i~~k~ 186 (187)
. .+|.. .....+++..+..|+
T Consensus 233 ~-~Gf~~~~~~~~~~W~~l~~~k 254 (254)
T 2nxc_A 233 G-AGFRPLEEAAEGEWVLLAYGR 254 (254)
T ss_dssp H-TTCEEEEEEEETTEEEEEEEC
T ss_pred H-CCCEEEEEeccCCeEEEEEEC
Confidence 3 34543 334567777777654
No 46
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.70 E-value=9.2e-16 Score=108.99 Aligned_cols=105 Identities=13% Similarity=0.101 Sum_probs=86.5
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCcee
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D 98 (187)
++.+|||+|||+|..+..+++.. .+++++|+++.+++.++++++..+. +++++++|+.+.++..... .++||
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~---~~~~D 112 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG---WEAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQ---GERFT 112 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT---CEEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHT---TCCEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhcc---CCceE
Confidence 77899999999999999999863 3499999999999999999998877 8999999998876654321 24799
Q ss_pred EEEEcCCC-cccHHHHHHHH--hcccCCeEEEEeCc
Q 029836 99 FVFVDADK-DNYVNYHKRLI--ELVKVGGVIGYDNT 131 (187)
Q Consensus 99 ~v~~d~~~-~~~~~~~~~~~--~~L~~gG~lv~~~~ 131 (187)
+|+++... ......++.+. ++|+|||++++...
T Consensus 113 ~i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 113 VAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp EEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred EEEECCCCchhHHHHHHHHHhhcccCCCcEEEEEeC
Confidence 99998653 45566777777 99999999987543
No 47
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.70 E-value=3.5e-16 Score=114.86 Aligned_cols=105 Identities=11% Similarity=0.074 Sum_probs=86.7
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..+..++... ..+|+++|+++.+++.|+++++..++ ++++++++|+.+.++.. .++|
T Consensus 53 ~~~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~------~~~f 123 (202)
T 2fpo_A 53 IVDAQCLDCFAGSGALGLEALSRY--AAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQK------GTPH 123 (202)
T ss_dssp HTTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSSC------CCCE
T ss_pred cCCCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhhc------CCCC
Confidence 377899999999999999877653 35999999999999999999999888 78999999998765432 4689
Q ss_pred eEEEEcCC--CcccHHHHHHHHh--cccCCeEEEEeCc
Q 029836 98 DFVFVDAD--KDNYVNYHKRLIE--LVKVGGVIGYDNT 131 (187)
Q Consensus 98 D~v~~d~~--~~~~~~~~~~~~~--~L~~gG~lv~~~~ 131 (187)
|+|+++++ .......++.+.+ +|+|||++++...
T Consensus 124 D~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 124 NIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp EEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CEEEECCCCCCCcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 99999976 3445667777755 5999999987643
No 48
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.70 E-value=1.4e-16 Score=121.15 Aligned_cols=114 Identities=14% Similarity=0.136 Sum_probs=94.2
Q ss_pred HHHHHHHHhhc-CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHH
Q 029836 8 AQFFSMLLKLI-NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQ 86 (187)
Q Consensus 8 ~~~l~~l~~~~-~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~ 86 (187)
..++..++... ++.+|||+|||+|..+..++...+ .+|+++|+++.+++.|+++++.+++.++++++++|+.+..+.
T Consensus 37 ~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~ 114 (259)
T 3lpm_A 37 AVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDL 114 (259)
T ss_dssp HHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGT
T ss_pred HHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhh
Confidence 34566666555 788999999999999999998743 499999999999999999999999988899999999876543
Q ss_pred HhhcccCCCceeEEEEcCCC-----------------------cccHHHHHHHHhcccCCeEEEE
Q 029836 87 LIQDEKYHGTFDFVFVDADK-----------------------DNYVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 87 ~~~~~~~~~~~D~v~~d~~~-----------------------~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
+. .++||+|+++++. .....+++.+.++|+|||.+++
T Consensus 115 ~~-----~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 174 (259)
T 3lpm_A 115 IP-----KERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF 174 (259)
T ss_dssp SC-----TTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred hc-----cCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE
Confidence 31 4689999997651 1235688999999999999997
No 49
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.69 E-value=1.7e-16 Score=115.71 Aligned_cols=108 Identities=10% Similarity=0.183 Sum_probs=90.2
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCc
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGT 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~ 96 (187)
..++.+|||+|||+|..+..+++.+++.++++++|+++.+++.|+++++..++.++++++++|+.+..... .++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------~~~ 93 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYI------DCP 93 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTC------CSC
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhc------cCC
Confidence 34567999999999999999998864467999999999999999999999988789999999987654322 578
Q ss_pred eeEEEEcCCC------------cccHHHHHHHHhcccCCeEEEEeC
Q 029836 97 FDFVFVDADK------------DNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 97 ~D~v~~d~~~------------~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
||+|+++... .....+++.+.++|+|||.+++..
T Consensus 94 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 94 VKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp EEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 9999988631 123578999999999999999864
No 50
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.69 E-value=1.4e-16 Score=120.60 Aligned_cols=117 Identities=16% Similarity=0.214 Sum_probs=97.2
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 83 (187)
.+.....+...+...++.+|||+|||+|..+..+++.+.+..+++++|+++.+++.|+++++..++.+++++.++|+.+.
T Consensus 78 ~~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 157 (255)
T 3mb5_A 78 HPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG 157 (255)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC
T ss_pred cHhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc
Confidence 34455555566666778899999999999999999885447899999999999999999999999877799999999865
Q ss_pred HHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 84 LDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 84 l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
++ .++||+|+++.. ....+++.+.+.|+|||.+++..
T Consensus 158 ~~--------~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 158 IE--------EENVDHVILDLP--QPERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp CC--------CCSEEEEEECSS--CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred cC--------CCCcCEEEECCC--CHHHHHHHHHHHcCCCCEEEEEE
Confidence 33 568999999764 34567889999999999999753
No 51
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.69 E-value=2e-16 Score=116.56 Aligned_cols=117 Identities=19% Similarity=0.221 Sum_probs=94.7
Q ss_pred HHHHHHHHhhc--CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHH
Q 029836 8 AQFFSMLLKLI--NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLD 85 (187)
Q Consensus 8 ~~~l~~l~~~~--~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~ 85 (187)
..+...++... ++.+|||+|||+|..+..+++. + +.+++++|+++.+++.++++++..+..++++++++|..+..
T Consensus 30 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~- 106 (219)
T 3dlc_A 30 PIIAENIINRFGITAGTCIDIGSGPGALSIALAKQ-S-DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP- 106 (219)
T ss_dssp HHHHHHHHHHHCCCEEEEEEETCTTSHHHHHHHHH-S-EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS-
T ss_pred HHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHc-C-CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC-
Confidence 34444444433 3349999999999999999987 3 68999999999999999999999998789999999987532
Q ss_pred HHhhcccCCCceeEEEEcCC---CcccHHHHHHHHhcccCCeEEEEeCcCC
Q 029836 86 QLIQDEKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTLW 133 (187)
Q Consensus 86 ~~~~~~~~~~~~D~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
+ ..++||+|++... ..+...+++.+.++|+|||.+++.+...
T Consensus 107 -~-----~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 107 -I-----EDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp -S-----CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred -C-----CcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 1 1568999998765 3556889999999999999999876543
No 52
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.69 E-value=1.1e-16 Score=121.19 Aligned_cols=109 Identities=20% Similarity=0.241 Sum_probs=92.4
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCc
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGT 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~ 96 (187)
..++.+|||+|||+|..+..+++..+ .+++++|+++.+++.++++++..++.++++++++|+.+. + + ..++
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~-----~~~~ 114 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNL-P-F-----QNEE 114 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-S-S-----CTTC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhC-C-C-----CCCC
Confidence 34567999999999999999999865 499999999999999999999999988899999999653 2 1 0478
Q ss_pred eeEEEEcCC--CcccHHHHHHHHhcccCCeEEEEeCcCCC
Q 029836 97 FDFVFVDAD--KDNYVNYHKRLIELVKVGGVIGYDNTLWG 134 (187)
Q Consensus 97 ~D~v~~d~~--~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
||+|++... .-+...+++.+.++|+|||++++.+..|.
T Consensus 115 fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 154 (257)
T 3f4k_A 115 LDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEASWF 154 (257)
T ss_dssp EEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEEEES
T ss_pred EEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEeecc
Confidence 999998765 33578899999999999999999876543
No 53
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.68 E-value=1.1e-16 Score=122.08 Aligned_cols=109 Identities=16% Similarity=0.199 Sum_probs=92.6
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCc
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGT 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~ 96 (187)
..++.+|||||||+|..+..+++. + ..+++++|+++.+++.++++++..++.++++++++|..+.. + ..++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~-----~~~~ 114 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH-V-TGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP--F-----RNEE 114 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT-C-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC--C-----CTTC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC--C-----CCCC
Confidence 345789999999999999999987 3 57999999999999999999999999888999999996532 1 1568
Q ss_pred eeEEEEcCC--CcccHHHHHHHHhcccCCeEEEEeCcCCC
Q 029836 97 FDFVFVDAD--KDNYVNYHKRLIELVKVGGVIGYDNTLWG 134 (187)
Q Consensus 97 ~D~v~~d~~--~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
||+|++... .-+...+++.+.++|+|||++++.+..+.
T Consensus 115 fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 154 (267)
T 3kkz_A 115 LDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSECSWF 154 (267)
T ss_dssp EEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEEEES
T ss_pred EEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEeeec
Confidence 999998765 23568899999999999999999876543
No 54
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.68 E-value=7.2e-16 Score=118.32 Aligned_cols=121 Identities=18% Similarity=0.177 Sum_probs=97.3
Q ss_pred HHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHh
Q 029836 9 QFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (187)
Q Consensus 9 ~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~ 88 (187)
.++..++...++.+|||+|||+|..+..+++.++..++|+++|+++.+++.++++++..++. +++++++|+.+......
T Consensus 73 ~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~ 151 (274)
T 3ajd_A 73 MIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDYLL 151 (274)
T ss_dssp GHHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHH
T ss_pred HHHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchhhh
Confidence 44555556667789999999999999999988764589999999999999999999999884 89999999987654321
Q ss_pred hcccCCCceeEEEEcCCC---------------------cccHHHHHHHHhcccCCeEEEEeCcCC
Q 029836 89 QDEKYHGTFDFVFVDADK---------------------DNYVNYHKRLIELVKVGGVIGYDNTLW 133 (187)
Q Consensus 89 ~~~~~~~~~D~v~~d~~~---------------------~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
.. .++||+|++|++. .....+++.+.++|||||.+++..+..
T Consensus 152 ~~---~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 152 KN---EIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp HT---TCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hc---cccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 11 4589999999542 234678999999999999999876543
No 55
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.68 E-value=6.6e-16 Score=118.54 Aligned_cols=116 Identities=18% Similarity=0.214 Sum_probs=96.7
Q ss_pred CHHHHHHHHHHHhh--cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCch
Q 029836 4 SPDEAQFFSMLLKL--INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPAL 81 (187)
Q Consensus 4 ~~~~~~~l~~l~~~--~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~ 81 (187)
.+++..++..++.. .++.+|||+|||+|..+..++...+ ..+++++|+++.+++.++++++..+.. +++++++|..
T Consensus 92 r~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~~ 169 (276)
T 2b3t_A 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERP-DCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWF 169 (276)
T ss_dssp CTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCT-TSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCSTT
T ss_pred CchHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcchh
Confidence 45677777777765 3567999999999999999998876 689999999999999999999998874 8999999997
Q ss_pred HHHHHHhhcccCCCceeEEEEcCCC----------------------------cccHHHHHHHHhcccCCeEEEEe
Q 029836 82 PLLDQLIQDEKYHGTFDFVFVDADK----------------------------DNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 82 ~~l~~~~~~~~~~~~~D~v~~d~~~----------------------------~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+.++ .++||+|+++++. ..+..+++.+.+.|+|||++++.
T Consensus 170 ~~~~--------~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 170 SALA--------GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp GGGT--------TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hhcc--------cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 6543 4689999998541 23467788899999999999985
No 56
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.68 E-value=5e-16 Score=121.75 Aligned_cols=106 Identities=16% Similarity=0.212 Sum_probs=88.3
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHc--CC-CCceEEEeCCchHHHHHHhhcccC
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA--GV-AHKIDFREGPALPLLDQLIQDEKY 93 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~--~~-~~~i~~~~~d~~~~l~~~~~~~~~ 93 (187)
..++++|||||||+|..+..+++..+ ..+++++|+++.+++.|+++++.. +. .++++++++|+.++++..
T Consensus 114 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------ 186 (321)
T 2pt6_A 114 SKEPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV------ 186 (321)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC------
T ss_pred CCCCCEEEEEcCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhc------
Confidence 45788999999999999999997644 689999999999999999998752 23 368999999998877643
Q ss_pred CCceeEEEEcCCC-----cc-c-HHHHHHHHhcccCCeEEEEe
Q 029836 94 HGTFDFVFVDADK-----DN-Y-VNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 94 ~~~~D~v~~d~~~-----~~-~-~~~~~~~~~~L~~gG~lv~~ 129 (187)
.++||+|++|... .. + .++++.+.+.|+|||++++.
T Consensus 187 ~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 229 (321)
T 2pt6_A 187 TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 229 (321)
T ss_dssp CSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 5689999998741 11 1 78999999999999999985
No 57
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.68 E-value=5.6e-16 Score=119.50 Aligned_cols=107 Identities=15% Similarity=0.169 Sum_probs=88.7
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcC--C-CCceEEEeCCchHHHHHHhhcccC
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAG--V-AHKIDFREGPALPLLDQLIQDEKY 93 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~--~-~~~i~~~~~d~~~~l~~~~~~~~~ 93 (187)
..++++|||||||.|..+.++++..+ ..+++++|+++.+++.+++++...+ . .++++++++|+.++++..
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------ 148 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV------ 148 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC------
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhC------
Confidence 35678999999999999999997643 6899999999999999999887542 1 368999999998877654
Q ss_pred CCceeEEEEcCCC-----ccc--HHHHHHHHhcccCCeEEEEeC
Q 029836 94 HGTFDFVFVDADK-----DNY--VNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 94 ~~~~D~v~~d~~~-----~~~--~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.++||+|++|... ... ..+++.+.+.|+|||++++..
T Consensus 149 ~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 149 TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp CSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 5689999998641 111 689999999999999999863
No 58
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.68 E-value=8.6e-16 Score=125.38 Aligned_cols=120 Identities=18% Similarity=0.253 Sum_probs=99.0
Q ss_pred HHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHH
Q 029836 6 DEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLD 85 (187)
Q Consensus 6 ~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~ 85 (187)
....++..++...++.+|||+|||+|..+..+++.++..++|+++|+++.+++.++++++..|+. ++++++|+.++..
T Consensus 88 ~ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~ 165 (464)
T 3m6w_A 88 PSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAE 165 (464)
T ss_dssp TTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHH
T ss_pred HHHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhh
Confidence 33455666666677889999999999999999998875689999999999999999999999984 9999999987654
Q ss_pred HHhhcccCCCceeEEEEcCCC---------cc----------------cHHHHHHHHhcccCCeEEEEeCcCC
Q 029836 86 QLIQDEKYHGTFDFVFVDADK---------DN----------------YVNYHKRLIELVKVGGVIGYDNTLW 133 (187)
Q Consensus 86 ~~~~~~~~~~~~D~v~~d~~~---------~~----------------~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
.. .++||+|++|++. .+ ...+++.+.++|||||.|++..+.+
T Consensus 166 ~~------~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 166 AF------GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp HH------CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred hc------cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 33 5789999998762 11 1668888999999999999876654
No 59
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.67 E-value=1.1e-15 Score=118.52 Aligned_cols=116 Identities=10% Similarity=0.133 Sum_probs=95.7
Q ss_pred HHHHHHHHHhh---cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH
Q 029836 7 EAQFFSMLLKL---INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (187)
Q Consensus 7 ~~~~l~~l~~~---~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 83 (187)
+.+.+..++.. .++.+|||||||+|..+..+++..+ .+|+++|+++.+++.++++++..++..++++.++|..++
T Consensus 57 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 134 (302)
T 3hem_A 57 QYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF 134 (302)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC
T ss_pred HHHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc
Confidence 34455555543 3567999999999999999998764 789999999999999999999999988999999999754
Q ss_pred HHHHhhcccCCCceeEEEEcCCC------------cccHHHHHHHHhcccCCeEEEEeCcCCC
Q 029836 84 LDQLIQDEKYHGTFDFVFVDADK------------DNYVNYHKRLIELVKVGGVIGYDNTLWG 134 (187)
Q Consensus 84 l~~~~~~~~~~~~~D~v~~d~~~------------~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
.++||+|++...- +.+..+++.+.++|||||.+++.+....
T Consensus 135 ----------~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 135 ----------DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp ----------CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred ----------CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 3689999987542 3347899999999999999999876543
No 60
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.67 E-value=4.3e-16 Score=118.03 Aligned_cols=103 Identities=16% Similarity=0.161 Sum_probs=87.4
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCcee
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D 98 (187)
++.+|||||||+|..++.++...+ +.+|+++|+++.+++.++++++..++. +++++++|+.++..... ..++||
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~l~-~v~~~~~d~~~~~~~~~----~~~~fD 153 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRP-ELELVLVDATRKKVAFVERAIEVLGLK-GARALWGRAEVLAREAG----HREAYA 153 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEECCHHHHTTSTT----TTTCEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCC-ceEEEECcHHHhhcccc----cCCCce
Confidence 467999999999999999998876 789999999999999999999999984 69999999976543100 036899
Q ss_pred EEEEcCCCcccHHHHHHHHhcccCCeEEEE
Q 029836 99 FVFVDADKDNYVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 99 ~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
+|++... .....+++.+.++|+|||.+++
T Consensus 154 ~I~s~a~-~~~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 154 RAVARAV-APLCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp EEEEESS-CCHHHHHHHHGGGEEEEEEEEE
T ss_pred EEEECCc-CCHHHHHHHHHHHcCCCeEEEE
Confidence 9999764 4567899999999999999886
No 61
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.67 E-value=1.3e-15 Score=112.72 Aligned_cols=105 Identities=17% Similarity=0.273 Sum_probs=86.9
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.+..+|||||||+|..+..+++..+ +.+++++|+++.+++.|++++...++ ++++++++|+.++...+. .++|
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~giD~s~~~l~~a~~~~~~~~~-~nv~~~~~d~~~l~~~~~-----~~~~ 109 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNP-DINYIGIELFKSVIVTAVQKVKDSEA-QNVKLLNIDADTLTDVFE-----PGEV 109 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHSCC-SSEEEECCCGGGHHHHCC-----TTSC
T ss_pred CCCceEEEEecCCCHHHHHHHHHCC-CCCEEEEEechHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcC-----cCCc
Confidence 3567999999999999999999876 68999999999999999999999887 689999999987432221 4689
Q ss_pred eEEEEcCC---Cc--------ccHHHHHHHHhcccCCeEEEEe
Q 029836 98 DFVFVDAD---KD--------NYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 98 D~v~~d~~---~~--------~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
|.|++..+ .. ....+++.+.+.|+|||.+++.
T Consensus 110 d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~ 152 (213)
T 2fca_A 110 KRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK 152 (213)
T ss_dssp CEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred CEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEE
Confidence 99987532 11 1478899999999999999874
No 62
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.67 E-value=5.8e-16 Score=113.95 Aligned_cols=112 Identities=18% Similarity=0.233 Sum_probs=91.4
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 83 (187)
.+.....+...+...++.+|||+|||+|..+..+++. ..+++++|+++.+++.++++++..+.. ++++.++|..+.
T Consensus 62 ~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~ 137 (210)
T 3lbf_A 62 QPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQG 137 (210)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGC
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccC
Confidence 4555566666666677889999999999999999987 579999999999999999999998874 899999999775
Q ss_pred HHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEe
Q 029836 84 LDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 84 l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
.+. .++||+|+++....... +.+.++|+|||.+++.
T Consensus 138 ~~~-------~~~~D~i~~~~~~~~~~---~~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 138 WQA-------RAPFDAIIVTAAPPEIP---TALMTQLDEGGILVLP 173 (210)
T ss_dssp CGG-------GCCEEEEEESSBCSSCC---THHHHTEEEEEEEEEE
T ss_pred Ccc-------CCCccEEEEccchhhhh---HHHHHhcccCcEEEEE
Confidence 432 46899999987644433 2578899999999874
No 63
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.67 E-value=2.4e-16 Score=120.16 Aligned_cols=118 Identities=13% Similarity=0.166 Sum_probs=92.9
Q ss_pred HHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHH---cCCCCceEEEeCCchHHHHH
Q 029836 10 FFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQK---AGVAHKIDFREGPALPLLDQ 86 (187)
Q Consensus 10 ~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~---~~~~~~i~~~~~d~~~~l~~ 86 (187)
+|..++...++.+|||+|||+|..++.++...+ ..+++++|+++.+++.|++++.. +++.++++++++|..+..+.
T Consensus 27 lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~ 105 (260)
T 2ozv_A 27 LLASLVADDRACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKA 105 (260)
T ss_dssp HHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHH
T ss_pred HHHHHhcccCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhh
Confidence 344444445667999999999999999999876 68999999999999999999998 88877899999999877543
Q ss_pred HhhcccCCCceeEEEEcCCC---------------------cccHHHHHHHHhcccCCeEEEE
Q 029836 87 LIQDEKYHGTFDFVFVDADK---------------------DNYVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 87 ~~~~~~~~~~~D~v~~d~~~---------------------~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
........++||+|+++++. ..+..+++.+.++|+|||.+++
T Consensus 106 ~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 168 (260)
T 2ozv_A 106 RVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSL 168 (260)
T ss_dssp HHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEE
T ss_pred hhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEE
Confidence 21100014689999998541 1256788999999999999986
No 64
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.67 E-value=6.9e-15 Score=115.76 Aligned_cols=115 Identities=15% Similarity=0.132 Sum_probs=91.6
Q ss_pred HHHHHh-hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCC-ceEEEeCCchHHHHHHh
Q 029836 11 FSMLLK-LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAH-KIDFREGPALPLLDQLI 88 (187)
Q Consensus 11 l~~l~~-~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~-~i~~~~~d~~~~l~~~~ 88 (187)
+..++. ..++.+|||+|||+|..++.++.. +.+|+++|+++.+++.|++|++.+++.+ +++++++|+.++++...
T Consensus 144 l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~---ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~ 220 (332)
T 2igt_A 144 LKNAVETADRPLKVLNLFGYTGVASLVAAAA---GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREE 220 (332)
T ss_dssp HHHHHHHSSSCCEEEEETCTTCHHHHHHHHT---TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHH
T ss_pred HHHHHHhcCCCCcEEEcccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHH
Confidence 444443 235679999999999999999975 3599999999999999999999998865 59999999998776532
Q ss_pred hcccCCCceeEEEEcCCC-------------cccHHHHHHHHhcccCCeEEEEeCc
Q 029836 89 QDEKYHGTFDFVFVDADK-------------DNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 89 ~~~~~~~~~D~v~~d~~~-------------~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.. .++||+|++|++. ..+..+++.+.++|+|||++++...
T Consensus 221 ~~---~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~ 273 (332)
T 2igt_A 221 RR---GSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTA 273 (332)
T ss_dssp HH---TCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred hc---CCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEEC
Confidence 11 3589999999762 1256788889999999999776543
No 65
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.66 E-value=9e-16 Score=113.47 Aligned_cols=104 Identities=19% Similarity=0.275 Sum_probs=87.4
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCcee
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D 98 (187)
++.+|||||||+|..+..+++..| +.+++++|+++.+++.|++++...++ ++++++++|+.++...+. .++||
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~-----~~~~D 113 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYFE-----DGEID 113 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTSC-----TTCCS
T ss_pred CCCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcC-----CCCCC
Confidence 467999999999999999999876 68999999999999999999999888 789999999976322121 46899
Q ss_pred EEEEcCCCc-----------ccHHHHHHHHhcccCCeEEEEe
Q 029836 99 FVFVDADKD-----------NYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 99 ~v~~d~~~~-----------~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+|++..+.. .+..+++.+.+.|+|||++++.
T Consensus 114 ~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (214)
T 1yzh_A 114 RLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK 155 (214)
T ss_dssp EEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred EEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence 999885421 2367999999999999999873
No 66
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.66 E-value=1.2e-15 Score=119.41 Aligned_cols=122 Identities=17% Similarity=0.256 Sum_probs=98.8
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 83 (187)
+.....++..++...++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.++++++..++ .+++++++|+.++
T Consensus 103 qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~-~~v~~~~~D~~~~ 181 (315)
T 1ixk_A 103 QEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV-LNVILFHSSSLHI 181 (315)
T ss_dssp CCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC-CSEEEESSCGGGG
T ss_pred eCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CeEEEEECChhhc
Confidence 344555666666667778999999999999999999876568999999999999999999999988 4799999999765
Q ss_pred HHHHhhcccCCCceeEEEEcCCCcc-------------------------cHHHHHHHHhcccCCeEEEEeCcCC
Q 029836 84 LDQLIQDEKYHGTFDFVFVDADKDN-------------------------YVNYHKRLIELVKVGGVIGYDNTLW 133 (187)
Q Consensus 84 l~~~~~~~~~~~~~D~v~~d~~~~~-------------------------~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
.. . .++||+|++|++... ...+++.+.++|||||.+++..+..
T Consensus 182 ~~-~------~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 182 GE-L------NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp GG-G------CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cc-c------cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 33 2 568999999865110 1478889999999999999876543
No 67
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.66 E-value=1.3e-15 Score=124.16 Aligned_cols=122 Identities=16% Similarity=0.167 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHH
Q 029836 5 PDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL 84 (187)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l 84 (187)
.....++..++...++.+|||+|||+|..+..+++.++..++|+++|+++.+++.+++|++..|+ .++.+.++|+.++.
T Consensus 91 d~ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~-~nv~v~~~Da~~l~ 169 (456)
T 3m4x_A 91 EPSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV-SNAIVTNHAPAELV 169 (456)
T ss_dssp CTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC-SSEEEECCCHHHHH
T ss_pred CHHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEeCCHHHhh
Confidence 33445666666667788999999999999999998876568999999999999999999999998 47999999998765
Q ss_pred HHHhhcccCCCceeEEEEcCCCc-------------------------ccHHHHHHHHhcccCCeEEEEeCcCC
Q 029836 85 DQLIQDEKYHGTFDFVFVDADKD-------------------------NYVNYHKRLIELVKVGGVIGYDNTLW 133 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~v~~d~~~~-------------------------~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
+.. .++||+|++|++.. ....+++.+.++|||||.|++..+..
T Consensus 170 ~~~------~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 170 PHF------SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp HHH------TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred hhc------cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 444 57899999997621 01267888899999999999876654
No 68
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.66 E-value=5.1e-16 Score=119.10 Aligned_cols=114 Identities=14% Similarity=0.093 Sum_probs=94.4
Q ss_pred HHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHH
Q 029836 8 AQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQL 87 (187)
Q Consensus 8 ~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~ 87 (187)
.+.+..+....+.++|||+|||+|.+++.+++..+ .++|+++|+++.+++.|+++++.+++ ++++++++|+.+. +.
T Consensus 108 ~e~~~~~~~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l-~~~~~~~~d~~~~-~~- 183 (272)
T 3a27_A 108 EERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKL-NNVIPILADNRDV-EL- 183 (272)
T ss_dssp HHHHHHHTSCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTC-SSEEEEESCGGGC-CC-
T ss_pred HHHHHHHHhcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCC-CCEEEEECChHHc-Cc-
Confidence 34444444455678999999999999999998865 57999999999999999999999988 4789999999876 32
Q ss_pred hhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 88 IQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 88 ~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
.++||+|++|++. ....++..+.+.|+|||++++....
T Consensus 184 ------~~~~D~Vi~d~p~-~~~~~l~~~~~~LkpgG~l~~s~~~ 221 (272)
T 3a27_A 184 ------KDVADRVIMGYVH-KTHKFLDKTFEFLKDRGVIHYHETV 221 (272)
T ss_dssp ------TTCEEEEEECCCS-SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred ------cCCceEEEECCcc-cHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 3589999999865 6677888999999999999876543
No 69
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.66 E-value=4.2e-16 Score=120.04 Aligned_cols=108 Identities=19% Similarity=0.256 Sum_probs=91.7
Q ss_pred hhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
...++.+|||||||+|.++..+++.++.+.+++++|+++.+++.+++++...+. ++++.++|+.+... .+
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~--------~~ 88 (284)
T 3gu3_A 19 KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIEL--------ND 88 (284)
T ss_dssp CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCCC--------SS
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcCc--------CC
Confidence 455788999999999999999999887558999999999999999999987654 89999999976321 46
Q ss_pred ceeEEEEcCC---CcccHHHHHHHHhcccCCeEEEEeCcCC
Q 029836 96 TFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTLW 133 (187)
Q Consensus 96 ~~D~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
+||+|++... ..+...+++.+.+.|+|||++++.+..|
T Consensus 89 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 129 (284)
T 3gu3_A 89 KYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPHW 129 (284)
T ss_dssp CEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECCH
T ss_pred CeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecch
Confidence 8999999865 3456889999999999999999877653
No 70
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.66 E-value=1.6e-16 Score=116.79 Aligned_cols=119 Identities=13% Similarity=0.211 Sum_probs=76.6
Q ss_pred CHHHHHHHHHHHhh----cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCC
Q 029836 4 SPDEAQFFSMLLKL----INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGP 79 (187)
Q Consensus 4 ~~~~~~~l~~l~~~----~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d 79 (187)
.+++..++..++.. .++.+|||+|||+|..+..+++..+ +.+++++|+++.+++.+++++...+. +++++++|
T Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d 87 (215)
T 4dzr_A 11 RPDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACP-GVSVTAVDLSMDALAVARRNAERFGA--VVDWAAAD 87 (215)
T ss_dssp CHHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCT-TEEEEEEECC---------------------CCHHH
T ss_pred CccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcc
Confidence 46677777777765 4677999999999999999999875 67999999999999999999988776 78999999
Q ss_pred chHHHHHHhhcccCCCceeEEEEcCCC---cc--------------------------cHHHHHHHHhcccCCeE-EEE
Q 029836 80 ALPLLDQLIQDEKYHGTFDFVFVDADK---DN--------------------------YVNYHKRLIELVKVGGV-IGY 128 (187)
Q Consensus 80 ~~~~l~~~~~~~~~~~~~D~v~~d~~~---~~--------------------------~~~~~~~~~~~L~~gG~-lv~ 128 (187)
+.+.++..... .++||+|+++++. .. +..+++.+.++|+|||+ +++
T Consensus 88 ~~~~~~~~~~~---~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 163 (215)
T 4dzr_A 88 GIEWLIERAER---GRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFL 163 (215)
T ss_dssp HHHHHHHHHHT---TCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEE
T ss_pred hHhhhhhhhhc---cCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 88755531111 3789999997541 00 15677788899999999 554
No 71
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.66 E-value=4.8e-15 Score=107.07 Aligned_cols=108 Identities=12% Similarity=0.048 Sum_probs=89.2
Q ss_pred HHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCC-ceEEEeCCchHHHHHHhhcc
Q 029836 13 MLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAH-KIDFREGPALPLLDQLIQDE 91 (187)
Q Consensus 13 ~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~-~i~~~~~d~~~~l~~~~~~~ 91 (187)
..+...++.+|||+|||+|..+..+++. ..+++++|+++.+++.+++++...+..+ +++++++|..+.++
T Consensus 46 ~~~~~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~------ 116 (194)
T 1dus_A 46 ENVVVDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK------ 116 (194)
T ss_dssp HHCCCCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT------
T ss_pred HHcccCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc------
Confidence 3334456789999999999999999876 5799999999999999999999888743 49999999876543
Q ss_pred cCCCceeEEEEcCCC----cccHHHHHHHHhcccCCeEEEEeCc
Q 029836 92 KYHGTFDFVFVDADK----DNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 92 ~~~~~~D~v~~d~~~----~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.++||+|+++... .....+++.+.++|+|||.+++...
T Consensus 117 --~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 117 --DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp --TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --cCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 4689999998752 3456788999999999999998643
No 72
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.66 E-value=4.7e-15 Score=106.26 Aligned_cols=113 Identities=16% Similarity=0.085 Sum_probs=93.3
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 83 (187)
.+...+.+...+...++.+|||+|||+|..+..+++ + ..+++++|+++.+++.++++++..++ ++++++++|..+.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~--~-~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~ 95 (183)
T 2yxd_A 20 KEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK--R-CKFVYAIDYLDGAIEVTKQNLAKFNI-KNCQIIKGRAEDV 95 (183)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT--T-SSEEEEEECSHHHHHHHHHHHHHTTC-CSEEEEESCHHHH
T ss_pred HHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh--c-CCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEECCcccc
Confidence 344445555555556778999999999999999987 3 68999999999999999999999887 6899999999874
Q ss_pred HHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 84 LDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 84 l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
++ .++||+|+++.. .....+++.+.++ |||.+++...
T Consensus 96 ~~--------~~~~D~i~~~~~-~~~~~~l~~~~~~--~gG~l~~~~~ 132 (183)
T 2yxd_A 96 LD--------KLEFNKAFIGGT-KNIEKIIEILDKK--KINHIVANTI 132 (183)
T ss_dssp GG--------GCCCSEEEECSC-SCHHHHHHHHHHT--TCCEEEEEES
T ss_pred cc--------CCCCcEEEECCc-ccHHHHHHHHhhC--CCCEEEEEec
Confidence 33 358999999887 7778888888887 9999998653
No 73
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.65 E-value=1.6e-15 Score=116.59 Aligned_cols=103 Identities=14% Similarity=0.124 Sum_probs=89.2
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCcee
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D 98 (187)
++++|||+|||+|.+++.+++..+ .+|+++|+++.+++.|+++++.+++.++++++++|+.++.. .++||
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~--~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~--------~~~fD 194 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--------ENIAD 194 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTC--CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--------CSCEE
T ss_pred CCCEEEEecccCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc--------cCCcc
Confidence 478999999999999999998754 38999999999999999999999997789999999987654 46899
Q ss_pred EEEEcCCCcccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 99 FVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 99 ~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
+|+++.+ .....+++.+.++|+|||++++....
T Consensus 195 ~Vi~~~p-~~~~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 195 RILMGYV-VRTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp EEEECCC-SSGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred EEEECCc-hhHHHHHHHHHHHCCCCeEEEEEEee
Confidence 9999875 34467888999999999999986654
No 74
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.65 E-value=1.7e-15 Score=116.52 Aligned_cols=104 Identities=14% Similarity=0.231 Sum_probs=88.6
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCcee
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D 98 (187)
++.+|||||||+|..+..+++. +.+++++|+++.+++.+++++...++.++++++++|+.+..+.. .++||
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------~~~fD 138 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHL------ETPVD 138 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGC------SSCEE
T ss_pred CCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhc------CCCce
Confidence 3569999999999999999986 57999999999999999999999888789999999997654221 57999
Q ss_pred EEEEcCC---CcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 99 FVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 99 ~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
+|++... ..+...+++.+.++|+|||++++...
T Consensus 139 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 139 LILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 9998765 34567899999999999999998654
No 75
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.65 E-value=7e-16 Score=115.68 Aligned_cols=114 Identities=17% Similarity=0.184 Sum_probs=87.3
Q ss_pred HHHHHHhh--cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHH
Q 029836 10 FFSMLLKL--INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQL 87 (187)
Q Consensus 10 ~l~~l~~~--~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~ 87 (187)
++..++.. .++.+|||||||+|..+..+++.. ..+++++|+++.+++.|+++.+..+ .+++++++|+.+.++.+
T Consensus 49 ~~~~l~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~ 124 (236)
T 1zx0_A 49 YMHALAAAASSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTL 124 (236)
T ss_dssp HHHHHHHHHTTTCEEEEEECCTTSHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGS
T ss_pred HHHHHHhhcCCCCCeEEEEeccCCHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhccc
Confidence 34444433 456799999999999999997642 3589999999999999999887765 58999999998764433
Q ss_pred hhcccCCCceeEEEEcCCC--------cccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 88 IQDEKYHGTFDFVFVDADK--------DNYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 88 ~~~~~~~~~~D~v~~d~~~--------~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
. +++||+|++|... .....+++++.++|||||++++.+..
T Consensus 125 ~-----~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 125 P-----DGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp C-----TTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred C-----CCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 2 5689999994321 11235689999999999999986654
No 76
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.65 E-value=3.3e-15 Score=120.27 Aligned_cols=112 Identities=16% Similarity=0.263 Sum_probs=94.3
Q ss_pred HhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCC-CCceEEEeCCchHHHHHHhhcccC
Q 029836 15 LKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGV-AHKIDFREGPALPLLDQLIQDEKY 93 (187)
Q Consensus 15 ~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~-~~~i~~~~~d~~~~l~~~~~~~~~ 93 (187)
....++++|||+|||+|..++.++... ..+|+++|+++.+++.|++|++.+++ .++++++++|+.++++.....
T Consensus 216 ~~~~~~~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~--- 290 (396)
T 3c0k_A 216 RRYVENKRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDR--- 290 (396)
T ss_dssp HHHCTTCEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHT---
T ss_pred HHhhCCCeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhc---
Confidence 334678899999999999999999852 46999999999999999999999988 668999999999887655322
Q ss_pred CCceeEEEEcCCC------------cccHHHHHHHHhcccCCeEEEEeCc
Q 029836 94 HGTFDFVFVDADK------------DNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 94 ~~~~D~v~~d~~~------------~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.++||+|++|++. ..+..++..+.++|+|||++++...
T Consensus 291 ~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 340 (396)
T 3c0k_A 291 GEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSC 340 (396)
T ss_dssp TCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 3589999999863 4567888999999999999987543
No 77
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.65 E-value=7.1e-16 Score=114.69 Aligned_cols=113 Identities=8% Similarity=0.105 Sum_probs=92.5
Q ss_pred HHHHHHhhcC-CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHh
Q 029836 10 FFSMLLKLIN-AKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (187)
Q Consensus 10 ~l~~l~~~~~-~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~ 88 (187)
-|+.++...+ +.+|+|||||+|++++.++...+ ..+|+++|+++.+++.|++|++.+++.++++++++|..+.++.
T Consensus 5 RL~~l~~~v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~-- 81 (225)
T 3kr9_A 5 RLELVASFVSQGAILLDVGSDHAYLPIELVERGQ-IKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE-- 81 (225)
T ss_dssp HHHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG--
T ss_pred HHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc--
Confidence 3566666554 45999999999999999998754 6799999999999999999999999988999999999765542
Q ss_pred hcccCCCceeEEEEcCC-CcccHHHHHHHHhcccCCeEEEEeC
Q 029836 89 QDEKYHGTFDFVFVDAD-KDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 89 ~~~~~~~~~D~v~~d~~-~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.++||+|++.+. ..-...+++.+...|+++|++|+.-
T Consensus 82 -----~~~~D~IviaG~Gg~~i~~Il~~~~~~L~~~~~lVlq~ 119 (225)
T 3kr9_A 82 -----TDQVSVITIAGMGGRLIARILEEGLGKLANVERLILQP 119 (225)
T ss_dssp -----GGCCCEEEEEEECHHHHHHHHHHTGGGCTTCCEEEEEE
T ss_pred -----CcCCCEEEEcCCChHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 126999987543 3336788889999999999999753
No 78
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.65 E-value=4.3e-15 Score=114.57 Aligned_cols=115 Identities=17% Similarity=0.306 Sum_probs=93.7
Q ss_pred CHHHHHHHHHHHhh---cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCc
Q 029836 4 SPDEAQFFSMLLKL---INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA 80 (187)
Q Consensus 4 ~~~~~~~l~~l~~~---~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~ 80 (187)
.+++..++..++.. .++.+|||+|||+|..+..++.. + +.+|+++|+++.+++.|++|++.+++.++++++++|.
T Consensus 105 r~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~-~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~ 182 (284)
T 1nv8_A 105 RPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-S-DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEF 182 (284)
T ss_dssp CTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-S-SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESST
T ss_pred ChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcc
Confidence 45566666665543 35679999999999999999988 5 7899999999999999999999999877899999999
Q ss_pred hHHHHHHhhcccCCCce---eEEEEcCCCcc----------------------cHHHHHHHH-hcccCCeEEEEe
Q 029836 81 LPLLDQLIQDEKYHGTF---DFVFVDADKDN----------------------YVNYHKRLI-ELVKVGGVIGYD 129 (187)
Q Consensus 81 ~~~l~~~~~~~~~~~~~---D~v~~d~~~~~----------------------~~~~~~~~~-~~L~~gG~lv~~ 129 (187)
.+.++ ++| |+|+++++... -..+++.+. +.|+|||++++.
T Consensus 183 ~~~~~---------~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 183 LEPFK---------EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp TGGGG---------GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred hhhcc---------cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 87543 367 99999854110 126889999 999999999974
No 79
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.65 E-value=1.9e-15 Score=110.81 Aligned_cols=100 Identities=12% Similarity=0.067 Sum_probs=87.1
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCcee
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D 98 (187)
++.+|||+|||+|..+..++...+ +.+++++|+++.+++.++++++..+.. ++++.++|+.+..+ .++||
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~--------~~~~D 134 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP-EAHFTLLDSLGKRVRFLRQVQHELKLE-NIEPVQSRVEEFPS--------EPPFD 134 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEECCTTTSCC--------CSCEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEecchhhCCc--------cCCcC
Confidence 478999999999999999998876 689999999999999999999998874 59999999976532 46899
Q ss_pred EEEEcCCCcccHHHHHHHHhcccCCeEEEEe
Q 029836 99 FVFVDADKDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 99 ~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+|++.. ...+..+++.+.+.|+|||++++.
T Consensus 135 ~i~~~~-~~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 135 GVISRA-FASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp EEECSC-SSSHHHHHHHHTTSEEEEEEEEEE
T ss_pred EEEEec-cCCHHHHHHHHHHhcCCCcEEEEE
Confidence 999765 356788999999999999999875
No 80
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.65 E-value=3.7e-15 Score=110.14 Aligned_cols=111 Identities=16% Similarity=0.251 Sum_probs=92.6
Q ss_pred hhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
...++.+|||+|||+|..+..+++..++..+++++|+++.+++.+++++...+.. ++++.++|..+.. + ..+
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~--~-----~~~ 105 (219)
T 3dh0_A 34 GLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIP--L-----PDN 105 (219)
T ss_dssp TCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCS--S-----CSS
T ss_pred CCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCC--C-----CCC
Confidence 4556789999999999999999988644689999999999999999999998874 8999999986542 1 156
Q ss_pred ceeEEEEcCC---CcccHHHHHHHHhcccCCeEEEEeCcCCC
Q 029836 96 TFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTLWG 134 (187)
Q Consensus 96 ~~D~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
+||+|++... ..+...+++.+.++|+|||.+++.+....
T Consensus 106 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 147 (219)
T 3dh0_A 106 TVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKE 147 (219)
T ss_dssp CEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred CeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEeccc
Confidence 8999998765 34567899999999999999999775544
No 81
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.64 E-value=2.8e-15 Score=114.64 Aligned_cols=109 Identities=25% Similarity=0.292 Sum_probs=91.8
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.++.+|||||||+|..+..+++..+ +.+++++|+++.+++.+++++...+. ++++++.+|..+... ..++|
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~-------~~~~f 106 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNP-DAEITSIDISPESLEKARENTEKNGI-KNVKFLQANIFSLPF-------EDSSF 106 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCGGGCCS-------CTTCE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCC-CCcEEEEcccccCCC-------CCCCe
Confidence 4678999999999999999999865 68999999999999999999999887 589999999975421 15789
Q ss_pred eEEEEcCC---CcccHHHHHHHHhcccCCeEEEEeCcCCCc
Q 029836 98 DFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTLWGG 135 (187)
Q Consensus 98 D~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~ 135 (187)
|+|++... ..+...+++.+.++|+|||++++.+..+..
T Consensus 107 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 147 (276)
T 3mgg_A 107 DHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGS 147 (276)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGG
T ss_pred eEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCC
Confidence 99998764 345678999999999999999997755433
No 82
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.64 E-value=5.5e-15 Score=111.01 Aligned_cols=106 Identities=19% Similarity=0.181 Sum_probs=84.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHH------cCCCCceEEEeCCchHHHHHHhhcc
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQK------AGVAHKIDFREGPALPLLDQLIQDE 91 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~------~~~~~~i~~~~~d~~~~l~~~~~~~ 91 (187)
.+..+|||||||+|..+..+++..+ +..++++|+++.+++.|+++++. .+. .+++++++|+.+.++...+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~~-- 120 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFP-DTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFFY-- 120 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGST-TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHCC--
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhCC--
Confidence 3566899999999999999998876 68999999999999999988764 233 6899999999875654321
Q ss_pred cCCCceeEEEEcCCCc-----------ccHHHHHHHHhcccCCeEEEEe
Q 029836 92 KYHGTFDFVFVDADKD-----------NYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 92 ~~~~~~D~v~~d~~~~-----------~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
.++||.|++..... ....+++.+.+.|+|||.|++.
T Consensus 121 --~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 121 --KGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp --TTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEE
T ss_pred --CcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEE
Confidence 46899998764311 1257999999999999999873
No 83
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.64 E-value=4.1e-15 Score=115.20 Aligned_cols=118 Identities=14% Similarity=0.167 Sum_probs=90.9
Q ss_pred HHHHHHhh--cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHc-CCCCceEEEeCCchHHHHH
Q 029836 10 FFSMLLKL--INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA-GVAHKIDFREGPALPLLDQ 86 (187)
Q Consensus 10 ~l~~l~~~--~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~-~~~~~i~~~~~d~~~~l~~ 86 (187)
++..+... .++.+|||+|||+|..+..+++.+++..+|+++|+++.+++.|+++++.. +...+++++++|+.+...
T Consensus 25 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~- 103 (299)
T 3g5t_A 25 FYKMIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKF- 103 (299)
T ss_dssp HHHHHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGG-
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCc-
Confidence 34444433 36789999999999999999987644789999999999999999999987 455799999999976421
Q ss_pred HhhcccCCCceeEEEEcCC--CcccHHHHHHHHhcccCCeEEEE
Q 029836 87 LIQDEKYHGTFDFVFVDAD--KDNYVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 87 ~~~~~~~~~~~D~v~~d~~--~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
........++||+|++... .-+...+++.+.+.|+|||++++
T Consensus 104 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 104 LGADSVDKQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp GCTTTTTSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred cccccccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEE
Confidence 1000000168999998754 22778899999999999999988
No 84
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.64 E-value=4.2e-15 Score=119.25 Aligned_cols=109 Identities=14% Similarity=0.177 Sum_probs=89.9
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCC-ceEEEeCCchHHHHHHhhcccCCCc
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAH-KIDFREGPALPLLDQLIQDEKYHGT 96 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~-~i~~~~~d~~~~l~~~~~~~~~~~~ 96 (187)
.++++|||+|||+|..++.++... ..+|+++|+++.+++.|++|++.+++.+ +++++++|+.++++..... ..+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g--a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~---~~~ 285 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG--AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRH---HLT 285 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT--BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHT---TCC
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHh---CCC
Confidence 567899999999999999999752 3589999999999999999999999865 8999999999887765322 358
Q ss_pred eeEEEEcCCCc------------ccHHHHHHHHhcccCCeEEEEeCc
Q 029836 97 FDFVFVDADKD------------NYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 97 ~D~v~~d~~~~------------~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
||+|++|++.. .+..++..+.++|+|||++++...
T Consensus 286 fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~ 332 (385)
T 2b78_A 286 YDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN 332 (385)
T ss_dssp EEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 99999997631 234466777899999999988643
No 85
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.64 E-value=8.5e-16 Score=118.91 Aligned_cols=115 Identities=16% Similarity=0.287 Sum_probs=87.8
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCC---------------------------
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVA--------------------------- 70 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~--------------------------- 70 (187)
.++++|||||||+|..+..++..++ ..+|+++|+++.+++.|+++++..+..
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKR 123 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHTC---------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccc
Confidence 3678999999999999999999886 579999999999999999987765422
Q ss_pred ------------------------------CceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCC---------cccHH
Q 029836 71 ------------------------------HKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADK---------DNYVN 111 (187)
Q Consensus 71 ------------------------------~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~---------~~~~~ 111 (187)
.+++|.++|.......+... ..++||+|++.... .....
T Consensus 124 ~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~--~~~~fD~I~~~~vl~~ihl~~~~~~~~~ 201 (292)
T 3g07_A 124 SCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEA--QTPEYDVVLCLSLTKWVHLNWGDEGLKR 201 (292)
T ss_dssp ------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTT--CCCCEEEEEEESCHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccCccccccccccccccccccccceEEecccccCccccccc--cCCCcCEEEEChHHHHhhhcCCHHHHHH
Confidence 58999999986433222111 15799999987641 14567
Q ss_pred HHHHHHhcccCCeEEEEeCcCCCc
Q 029836 112 YHKRLIELVKVGGVIGYDNTLWGG 135 (187)
Q Consensus 112 ~~~~~~~~L~~gG~lv~~~~~~~~ 135 (187)
+++.+.++|+|||+|++....|..
T Consensus 202 ~l~~~~~~LkpGG~lil~~~~~~~ 225 (292)
T 3g07_A 202 MFRRIYRHLRPGGILVLEPQPWSS 225 (292)
T ss_dssp HHHHHHHHEEEEEEEEEECCCHHH
T ss_pred HHHHHHHHhCCCcEEEEecCCchh
Confidence 899999999999999997666543
No 86
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.63 E-value=2.1e-15 Score=115.79 Aligned_cols=114 Identities=21% Similarity=0.304 Sum_probs=93.5
Q ss_pred HHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHH
Q 029836 7 EAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQ 86 (187)
Q Consensus 7 ~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~ 86 (187)
....+...+...++.+|||+|||+|..+..+++.+.+..+++++|+++.+++.|+++++..++.++++++++|..+.++
T Consensus 100 ~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~- 178 (277)
T 1o54_A 100 DSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFD- 178 (277)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCS-
T ss_pred HHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHccc-
Confidence 3334444445566789999999999999999998654689999999999999999999998886789999999976632
Q ss_pred HhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 87 LIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 87 ~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.++||+|+++.. ....+++.+.+.|+|||.+++..
T Consensus 179 -------~~~~D~V~~~~~--~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 179 -------EKDVDALFLDVP--DPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp -------CCSEEEEEECCS--CGGGTHHHHHHHEEEEEEEEEEE
T ss_pred -------CCccCEEEECCc--CHHHHHHHHHHHcCCCCEEEEEe
Confidence 468999999764 33477888999999999998754
No 87
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.63 E-value=2.6e-15 Score=114.57 Aligned_cols=120 Identities=15% Similarity=0.270 Sum_probs=97.0
Q ss_pred HHHHHHHHHHhh---cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchH
Q 029836 6 DEAQFFSMLLKL---INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP 82 (187)
Q Consensus 6 ~~~~~l~~l~~~---~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~ 82 (187)
.+..++..++.. .++.+|||||||+|..+..+++.. +.+++++|+++.+++.++++++..++.+++++.++|+.+
T Consensus 45 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 122 (273)
T 3bus_A 45 ATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMD 122 (273)
T ss_dssp HHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcccc
Confidence 344555555544 356799999999999999999875 479999999999999999999999987899999999875
Q ss_pred HHHHHhhcccCCCceeEEEEcCC---CcccHHHHHHHHhcccCCeEEEEeCcCCC
Q 029836 83 LLDQLIQDEKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTLWG 134 (187)
Q Consensus 83 ~l~~~~~~~~~~~~~D~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
. + + ..++||+|++... ..+...+++.+.++|+|||.+++.+....
T Consensus 123 ~-~-~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 170 (273)
T 3bus_A 123 L-P-F-----EDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVLL 170 (273)
T ss_dssp C-C-S-----CTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEES
T ss_pred C-C-C-----CCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeecc
Confidence 3 1 1 0468999997654 34567899999999999999999876543
No 88
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.63 E-value=3.3e-15 Score=112.22 Aligned_cols=119 Identities=18% Similarity=0.220 Sum_probs=95.6
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 83 (187)
++....-+..++...++.+|||+|||+|..+..++... .+++++|+++.+++.+++++...+. +++++.++|+.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~ 81 (239)
T 1xxl_A 6 HHHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGV-ENVRFQQGTAESL 81 (239)
T ss_dssp CHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTC-CSEEEEECBTTBC
T ss_pred cCCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCC-CCeEEEecccccC
Confidence 34444555555667788899999999999999998763 5899999999999999999998887 4899999998653
Q ss_pred HHHHhhcccCCCceeEEEEcCC---CcccHHHHHHHHhcccCCeEEEEeCcCC
Q 029836 84 LDQLIQDEKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTLW 133 (187)
Q Consensus 84 l~~~~~~~~~~~~~D~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
+ + ..++||+|++... ..+...+++.+.++|+|||++++.+...
T Consensus 82 -~-~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 82 -P-F-----PDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp -C-S-----CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred -C-C-----CCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 2 1 1468999998754 3456889999999999999999866543
No 89
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.63 E-value=2.8e-15 Score=110.64 Aligned_cols=115 Identities=22% Similarity=0.275 Sum_probs=91.3
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 83 (187)
.+.....+..++...++.+|||+|||+|..+..+++..++..+++++|+++.+++.+++++...+. +++++.++|....
T Consensus 62 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~ 140 (215)
T 2yxe_A 62 AIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY-DNVIVIVGDGTLG 140 (215)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC-TTEEEEESCGGGC
T ss_pred cHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CCeEEEECCcccC
Confidence 345555555555666778999999999999999998864358999999999999999999998887 4699999998654
Q ss_pred HHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEe
Q 029836 84 LDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 84 l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
++. .++||+|++........ +.+.++|+|||.+++.
T Consensus 141 ~~~-------~~~fD~v~~~~~~~~~~---~~~~~~L~pgG~lv~~ 176 (215)
T 2yxe_A 141 YEP-------LAPYDRIYTTAAGPKIP---EPLIRQLKDGGKLLMP 176 (215)
T ss_dssp CGG-------GCCEEEEEESSBBSSCC---HHHHHTEEEEEEEEEE
T ss_pred CCC-------CCCeeEEEECCchHHHH---HHHHHHcCCCcEEEEE
Confidence 331 35899999987644333 4778999999999875
No 90
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.63 E-value=2.6e-15 Score=117.46 Aligned_cols=115 Identities=18% Similarity=0.301 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHH
Q 029836 5 PDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL 84 (187)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l 84 (187)
+.....+...+...++.+|||||||+|..+..+++..+..++|+++|+++++++.|+++++..++. ++++.++|..+.+
T Consensus 61 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~-~v~~~~~d~~~~~ 139 (317)
T 1dl5_A 61 PSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE-NVIFVCGDGYYGV 139 (317)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCC
T ss_pred HHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEECChhhcc
Confidence 344455555555667789999999999999999987653578999999999999999999998884 5999999997654
Q ss_pred HHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 85 DQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
+. .++||+|+++....... +.+.+.|||||.+++..
T Consensus 140 ~~-------~~~fD~Iv~~~~~~~~~---~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 140 PE-------FSPYDVIFVTVGVDEVP---ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp GG-------GCCEEEEEECSBBSCCC---HHHHHHEEEEEEEEEEB
T ss_pred cc-------CCCeEEEEEcCCHHHHH---HHHHHhcCCCcEEEEEE
Confidence 32 46899999987644443 56778999999999863
No 91
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.63 E-value=7.2e-15 Score=113.06 Aligned_cols=117 Identities=9% Similarity=0.070 Sum_probs=95.5
Q ss_pred HHHHHHHHHHhh---cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchH
Q 029836 6 DEAQFFSMLLKL---INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP 82 (187)
Q Consensus 6 ~~~~~l~~l~~~---~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~ 82 (187)
.+...+..++.. .++.+|||||||+|..+..+++..+ .+|+++|+++.+++.++++++..+..+++++.++|..+
T Consensus 48 a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 125 (287)
T 1kpg_A 48 AQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ 125 (287)
T ss_dssp HHHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG
T ss_pred HHHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhh
Confidence 344555555543 3567999999999999999996653 59999999999999999999998887899999999854
Q ss_pred HHHHHhhcccCCCceeEEEEcCC-----CcccHHHHHHHHhcccCCeEEEEeCcCCC
Q 029836 83 LLDQLIQDEKYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNTLWG 134 (187)
Q Consensus 83 ~l~~~~~~~~~~~~~D~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
+ .++||+|++... ..+...+++.+.++|||||.+++.+....
T Consensus 126 ~----------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 126 F----------DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGL 172 (287)
T ss_dssp C----------CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred C----------CCCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCC
Confidence 3 358999998754 25678899999999999999999776543
No 92
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.63 E-value=4.7e-15 Score=121.85 Aligned_cols=122 Identities=13% Similarity=0.180 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHhhc--CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchH
Q 029836 5 PDEAQFFSMLLKLI--NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP 82 (187)
Q Consensus 5 ~~~~~~l~~l~~~~--~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~ 82 (187)
.....++..++... ++.+|||+|||+|..+..+++.++..++|+++|+++.+++.++++++..|+ .+++++++|+.+
T Consensus 101 d~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~-~nv~~~~~D~~~ 179 (479)
T 2frx_A 101 EASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI-SNVALTHFDGRV 179 (479)
T ss_dssp CHHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC-CSEEEECCCSTT
T ss_pred CHHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCCHHH
Confidence 34445555566655 778999999999999999999876568999999999999999999999998 579999999976
Q ss_pred HHHHHhhcccCCCceeEEEEcCCCc---------c----------------cHHHHHHHHhcccCCeEEEEeCcCC
Q 029836 83 LLDQLIQDEKYHGTFDFVFVDADKD---------N----------------YVNYHKRLIELVKVGGVIGYDNTLW 133 (187)
Q Consensus 83 ~l~~~~~~~~~~~~~D~v~~d~~~~---------~----------------~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
+.... .++||.|++|++.. + ...+++.+.++|||||.|++..+.+
T Consensus 180 ~~~~~------~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 180 FGAAV------PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp HHHHS------TTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hhhhc------cccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 54322 56899999986521 0 1357888889999999999876644
No 93
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.62 E-value=4.2e-15 Score=119.62 Aligned_cols=111 Identities=22% Similarity=0.353 Sum_probs=93.1
Q ss_pred hhc-CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCC
Q 029836 16 KLI-NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYH 94 (187)
Q Consensus 16 ~~~-~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~ 94 (187)
... ++++|||+|||+|..+..++.. + ..+|+++|+++.+++.|+++++.+++.++++++++|+.+.++.+... .
T Consensus 213 ~~~~~~~~VLDl~~G~G~~~~~la~~-g-~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~---~ 287 (396)
T 2as0_A 213 KWVQPGDRVLDVFTYTGGFAIHAAIA-G-ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKK---G 287 (396)
T ss_dssp GGCCTTCEEEETTCTTTHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHT---T
T ss_pred HHhhCCCeEEEecCCCCHHHHHHHHC-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhh---C
Confidence 344 6789999999999999999976 2 46999999999999999999999988668999999998887654322 4
Q ss_pred CceeEEEEcCCC------------cccHHHHHHHHhcccCCeEEEEeCc
Q 029836 95 GTFDFVFVDADK------------DNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 95 ~~~D~v~~d~~~------------~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
++||+|++|++. ..+..++..+.++|+|||++++...
T Consensus 288 ~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 336 (396)
T 2as0_A 288 EKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC 336 (396)
T ss_dssp CCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 589999999873 4467788899999999998887544
No 94
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.62 E-value=1.3e-16 Score=119.82 Aligned_cols=112 Identities=16% Similarity=0.128 Sum_probs=89.6
Q ss_pred HHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHH
Q 029836 8 AQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQL 87 (187)
Q Consensus 8 ~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~ 87 (187)
..++..+....++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|+++++..++.++++++++|+.+..+
T Consensus 67 ~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-- 141 (241)
T 3gdh_A 67 EHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS-- 141 (241)
T ss_dssp HHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG--
T ss_pred HHHHHHhhhccCCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcc--
Confidence 344444555557899999999999999999985 489999999999999999999999887799999999987652
Q ss_pred hhcccCCCceeEEEEcCCCcc---cHHHHHHHHhcccCCeEEEEeC
Q 029836 88 IQDEKYHGTFDFVFVDADKDN---YVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 88 ~~~~~~~~~~D~v~~d~~~~~---~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.++||+|+++..... ....+..+.++|+|||+++++.
T Consensus 142 ------~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 142 ------FLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp ------GCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred ------cCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHHH
Confidence 568999999876222 2224456778999999987643
No 95
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.62 E-value=1.4e-15 Score=111.69 Aligned_cols=115 Identities=13% Similarity=0.068 Sum_probs=84.1
Q ss_pred CCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcC-----------CCC
Q 029836 3 TSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAG-----------VAH 71 (187)
Q Consensus 3 ~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~-----------~~~ 71 (187)
.++...+++..+ ...++.+|||+|||+|..+.++++. +.+|+++|+|+.+++.|+++..... ...
T Consensus 7 ~~~~l~~~~~~l-~~~~~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~ 82 (203)
T 1pjz_A 7 VNKDLQQYWSSL-NVVPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAP 82 (203)
T ss_dssp STHHHHHHHHHH-CCCTTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECS
T ss_pred CCHHHHHHHHhc-ccCCCCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCC
Confidence 344455555443 2346789999999999999999986 4699999999999999998764210 125
Q ss_pred ceEEEeCCchHHHHHHhhcccCCCceeEEEEcCC-----CcccHHHHHHHHhcccCCeEEE
Q 029836 72 KIDFREGPALPLLDQLIQDEKYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIG 127 (187)
Q Consensus 72 ~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv 127 (187)
+++++++|+.+....- .++||+|+.... ......+++++.++|||||.++
T Consensus 83 ~v~~~~~d~~~l~~~~------~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~ 137 (203)
T 1pjz_A 83 GIEIWCGDFFALTARD------IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGL 137 (203)
T ss_dssp SSEEEEECCSSSTHHH------HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEE
T ss_pred ccEEEECccccCCccc------CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 7999999997653211 158999997543 1234568899999999999833
No 96
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.62 E-value=3.6e-15 Score=113.21 Aligned_cols=107 Identities=17% Similarity=0.248 Sum_probs=88.0
Q ss_pred HhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCC
Q 029836 15 LKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYH 94 (187)
Q Consensus 15 ~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~ 94 (187)
+...++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++++..+. +++++.++|+.+. + +. +
T Consensus 33 l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~l-~-~~-----~ 101 (260)
T 1vl5_A 33 AALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGH-QQVEYVQGDAEQM-P-FT-----D 101 (260)
T ss_dssp HTCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCC-CC-C-SC-----T
T ss_pred hCCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEecHHhC-C-CC-----C
Confidence 344567899999999999999998764 4999999999999999999998887 4899999998653 2 11 4
Q ss_pred CceeEEEEcCC---CcccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 95 GTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 95 ~~~D~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
++||+|++... ..+...++.++.+.|+|||++++.+..
T Consensus 102 ~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~ 142 (260)
T 1vl5_A 102 ERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNS 142 (260)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 68999998754 345678999999999999999986543
No 97
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.62 E-value=5.6e-15 Score=107.38 Aligned_cols=107 Identities=15% Similarity=0.093 Sum_probs=88.0
Q ss_pred HHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhccc
Q 029836 13 MLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEK 92 (187)
Q Consensus 13 ~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~ 92 (187)
.++...++.+|||+|||+|..+..+++. +.+++++|+++.+++.++++++..+. +++++.++|..+...
T Consensus 26 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~------- 94 (199)
T 2xvm_A 26 EAVKVVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENL-DNLHTRVVDLNNLTF------- 94 (199)
T ss_dssp HHTTTSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTC-TTEEEEECCGGGCCC-------
T ss_pred HHhhccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCC-CCcEEEEcchhhCCC-------
Confidence 3445567789999999999999999976 46999999999999999999988877 579999999875421
Q ss_pred CCCceeEEEEcCC-----CcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 93 YHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 93 ~~~~~D~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.++||+|++... .+....+++.+.++|+|||.+++.+.
T Consensus 95 -~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 95 -DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp -CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred -CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 368999998754 23567899999999999999776443
No 98
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.62 E-value=2.1e-14 Score=116.76 Aligned_cols=122 Identities=16% Similarity=0.199 Sum_probs=98.9
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 83 (187)
+.....++..++...++.+|||+|||+|..+..+++..+ +++++++|+++.+++.++++++..+. +++++++|+.+.
T Consensus 231 qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~-~~~v~a~D~~~~~l~~~~~~~~~~g~--~~~~~~~D~~~~ 307 (429)
T 1sqg_A 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRYP 307 (429)
T ss_dssp CCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCT-TCEEEEEESSTTTHHHHHHHHHHTTC--CCEEEECCTTCT
T ss_pred eCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHHcCC--CeEEEeCchhhc
Confidence 445566666777777788999999999999999999876 48999999999999999999999887 478999999766
Q ss_pred HHHHhhcccCCCceeEEEEcCCCcc-------------------------cHHHHHHHHhcccCCeEEEEeCcCC
Q 029836 84 LDQLIQDEKYHGTFDFVFVDADKDN-------------------------YVNYHKRLIELVKVGGVIGYDNTLW 133 (187)
Q Consensus 84 l~~~~~~~~~~~~~D~v~~d~~~~~-------------------------~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
.+.+. .++||+|++|++... ...+++.+.++|||||.+++..+.+
T Consensus 308 ~~~~~-----~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 308 SQWCG-----EQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp HHHHT-----TCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred hhhcc-----cCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 44331 368999999875211 1467888999999999999877654
No 99
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.62 E-value=6.9e-15 Score=120.22 Aligned_cols=124 Identities=18% Similarity=0.196 Sum_probs=99.0
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 83 (187)
+.....++..++...++.+|||+|||+|..+..+++.++..++++++|+++.+++.++++++..|+ .+++++++|+.+.
T Consensus 244 qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~-~~v~~~~~D~~~~ 322 (450)
T 2yxl_A 244 QEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI-KIVKPLVKDARKA 322 (450)
T ss_dssp CCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCTTCC
T ss_pred cCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC-CcEEEEEcChhhc
Confidence 344556666666767778999999999999999999876448999999999999999999999988 5799999998765
Q ss_pred HHHHhhcccCCCceeEEEEcCCCcc-------------------------cHHHHHHHHhcccCCeEEEEeCcCC
Q 029836 84 LDQLIQDEKYHGTFDFVFVDADKDN-------------------------YVNYHKRLIELVKVGGVIGYDNTLW 133 (187)
Q Consensus 84 l~~~~~~~~~~~~~D~v~~d~~~~~-------------------------~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
.+.+. .++||+|++|++... ...+++.+.++|||||.+++..+..
T Consensus 323 ~~~~~-----~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 323 PEIIG-----EEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp SSSSC-----SSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred chhhc-----cCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 32220 268999999865211 0567889999999999999876644
No 100
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.62 E-value=3.1e-15 Score=111.53 Aligned_cols=103 Identities=18% Similarity=0.260 Sum_probs=84.4
Q ss_pred hcCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 17 LINAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 17 ~~~~~~vLeiG~g-~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
..++.+|||+||| +|..+..+++.. ..+|+++|+++.+++.|+++++..+. +++++++|+.... .+. .+
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~-~~~-----~~ 122 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIK-GVV-----EG 122 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSST-TTC-----CS
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhh-hcc-----cC
Confidence 3467899999999 999999999874 57999999999999999999999887 8999999964221 111 46
Q ss_pred ceeEEEEcCCCc----------------------ccHHHHHHHHhcccCCeEEEEe
Q 029836 96 TFDFVFVDADKD----------------------NYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 96 ~~D~v~~d~~~~----------------------~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+||+|+++++.. .+..+++.+.++|+|||.+++.
T Consensus 123 ~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 178 (230)
T 3evz_A 123 TFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY 178 (230)
T ss_dssp CEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred ceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence 899999986511 1367899999999999999873
No 101
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.62 E-value=5.7e-15 Score=109.89 Aligned_cols=119 Identities=16% Similarity=0.247 Sum_probs=90.1
Q ss_pred HHHHHHHHHHH--hhcCCCEEEEEcccccHHHHHHHhhCC----CCCEEEEEeCCchHHHHHHHHHHHcCC----CCceE
Q 029836 5 PDEAQFFSMLL--KLINAKNTMEIGVFTGYSLLATALAIP----DDGKILALDITKEHYEKGLPIIQKAGV----AHKID 74 (187)
Q Consensus 5 ~~~~~~l~~l~--~~~~~~~vLeiG~g~G~~~~~l~~~~~----~~~~v~~vd~~~~~~~~a~~~~~~~~~----~~~i~ 74 (187)
|.....+..++ ...++.+|||||||+|..+..+++... +.++|+++|+++.+++.|+++++..+. ..+++
T Consensus 64 p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~ 143 (227)
T 2pbf_A 64 PHMHALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFK 143 (227)
T ss_dssp HHHHHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEE
T ss_pred hHHHHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEE
Confidence 34444433333 345678999999999999999998864 457999999999999999999998873 36899
Q ss_pred EEeCCchHHHHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEe
Q 029836 75 FREGPALPLLDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 75 ~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
++.+|..+..+..... .++||+|+++..... +++.+.++|+|||.+++.
T Consensus 144 ~~~~d~~~~~~~~~~~---~~~fD~I~~~~~~~~---~~~~~~~~LkpgG~lv~~ 192 (227)
T 2pbf_A 144 IIHKNIYQVNEEEKKE---LGLFDAIHVGASASE---LPEILVDLLAENGKLIIP 192 (227)
T ss_dssp EEECCGGGCCHHHHHH---HCCEEEEEECSBBSS---CCHHHHHHEEEEEEEEEE
T ss_pred EEECChHhcccccCcc---CCCcCEEEECCchHH---HHHHHHHhcCCCcEEEEE
Confidence 9999997753110000 368999999876443 346778899999999874
No 102
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.62 E-value=2.9e-15 Score=115.79 Aligned_cols=108 Identities=16% Similarity=0.243 Sum_probs=91.0
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCc
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGT 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~ 96 (187)
..++.+|||||||+|..+..+++.+ +.+++++|+++.+++.++++++..++.++++++++|+.+. + + .+++
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~-----~~~~ 150 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI-P-C-----EDNS 150 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC-S-S-----CTTC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC-C-C-----CCCC
Confidence 3467899999999999999999875 3699999999999999999999999888999999998753 2 1 0468
Q ss_pred eeEEEEcCC---CcccHHHHHHHHhcccCCeEEEEeCcCC
Q 029836 97 FDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTLW 133 (187)
Q Consensus 97 ~D~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
||+|++... ..+...+++.+.++|||||.+++.+...
T Consensus 151 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 151 YDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred EeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEecc
Confidence 999998754 3446889999999999999999987654
No 103
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.62 E-value=3.6e-15 Score=113.16 Aligned_cols=117 Identities=10% Similarity=-0.005 Sum_probs=86.2
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHH----------c------
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQK----------A------ 67 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~----------~------ 67 (187)
++...+++..+....++.+|||+|||+|..+.+|++. +.+|++||+++.+++.|++.... .
T Consensus 53 ~~~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~ 129 (252)
T 2gb4_A 53 HQLLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFK 129 (252)
T ss_dssp CHHHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEE
T ss_pred CHHHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccccc
Confidence 3444455544443346789999999999999999975 57999999999999999765431 0
Q ss_pred CCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCC-----CcccHHHHHHHHhcccCCeEEEEe
Q 029836 68 GVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 68 ~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
....+++++++|+.+..... .++||+|+.... ......+++.+.++|||||.+++.
T Consensus 130 ~~~~~i~~~~~D~~~l~~~~------~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 130 SSSGSISLYCCSIFDLPRAN------IGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp ETTSSEEEEESCTTTGGGGC------CCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred cCCCceEEEECccccCCccc------CCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 01258999999997653211 268999996543 234567899999999999998643
No 104
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.62 E-value=1e-15 Score=114.33 Aligned_cols=104 Identities=13% Similarity=0.150 Sum_probs=85.7
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..+..+++..+ +.+++++|+++.+++.++++++..+ +++++++|+.+... .++|
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~--------~~~f 110 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYP-EATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDF--------EEKY 110 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCC--------CSCE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCC--------CCCc
Confidence 3568999999999999999999876 6899999999999999998876543 89999999976422 3689
Q ss_pred eEEEEcCCCc-----ccHHHHHHHHhcccCCeEEEEeCcCC
Q 029836 98 DFVFVDADKD-----NYVNYHKRLIELVKVGGVIGYDNTLW 133 (187)
Q Consensus 98 D~v~~d~~~~-----~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
|+|++..... ....+++.+.+.|+|||.+++.+...
T Consensus 111 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 111 DMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVH 151 (234)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred eEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 9999886521 22358999999999999999877554
No 105
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.62 E-value=8.4e-15 Score=115.43 Aligned_cols=107 Identities=13% Similarity=0.174 Sum_probs=85.5
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcC---CC----CceEEEeCCchHHHHHHhhcc
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAG---VA----HKIDFREGPALPLLDQLIQDE 91 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~---~~----~~i~~~~~d~~~~l~~~~~~~ 91 (187)
+|++||+||||.|..+.++++.. ..+|++||+++.+++.|++++...+ +. ++++++.+|+.++++.....
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~--~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~- 264 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK--PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE- 264 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC--CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH-
T ss_pred CCCEEEEEECChhHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhcc-
Confidence 57899999999999999999863 3899999999999999999986432 22 27999999999998764221
Q ss_pred cCCCceeEEEEcCCC-c--------ccHHHHHHH----HhcccCCeEEEEeC
Q 029836 92 KYHGTFDFVFVDADK-D--------NYVNYHKRL----IELVKVGGVIGYDN 130 (187)
Q Consensus 92 ~~~~~~D~v~~d~~~-~--------~~~~~~~~~----~~~L~~gG~lv~~~ 130 (187)
.++||+||+|... . ...++++.+ .++|+|||++++..
T Consensus 265 --~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 265 --GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp --TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred --CCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 5689999999742 1 225677777 89999999999753
No 106
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.62 E-value=3.6e-14 Score=102.21 Aligned_cols=156 Identities=12% Similarity=-0.017 Sum_probs=103.0
Q ss_pred HHHHHHHHHhh-cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHH
Q 029836 7 EAQFFSMLLKL-INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLD 85 (187)
Q Consensus 7 ~~~~l~~l~~~-~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~ 85 (187)
...+....... .++.+|||+|||+|..++.++...| ..+++++|+++.+++.+++++...|...++++ .|.....+
T Consensus 36 ld~fY~~~~~~l~~~~~VLDlGCG~GplAl~l~~~~p-~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~ 112 (200)
T 3fzg_A 36 LNDFYTYVFGNIKHVSSILDFGCGFNPLALYQWNENE-KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVY 112 (200)
T ss_dssp HHHHHHHHHHHSCCCSEEEEETCTTHHHHHHHHCSSC-CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHT
T ss_pred HHHHHHHHHhhcCCCCeEEEecCCCCHHHHHHHhcCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCC
Confidence 34454454443 5588999999999999999987766 67999999999999999999999998667777 45543322
Q ss_pred HHhhcccCCCceeEEEEcCC---CcccHHHHHHHHhcccCCeEEEEeCcCC-Ccc-ccCCCCCCchhhhhhHHHHHHHHH
Q 029836 86 QLIQDEKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTLW-GGS-VVAPPDADLDEHFLYLRDFVQELN 160 (187)
Q Consensus 86 ~~~~~~~~~~~~D~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 160 (187)
.++||+|++-.. -++....+..+.+.|++||++|--++-. .|. ....+. ....|.
T Consensus 113 --------~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~------------Y~~~~~ 172 (200)
T 3fzg_A 113 --------KGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEEN------------YQLWFE 172 (200)
T ss_dssp --------TSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCC------------HHHHHH
T ss_pred --------CCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhh------------HHHHHH
Confidence 578999997643 1222223447889999999998654211 121 111111 223444
Q ss_pred HHHhcCCCeeEEEeecCCeeEEEEEc
Q 029836 161 KALAVDPRIEICQISIADGVTLCRRI 186 (187)
Q Consensus 161 ~~~~~~~~~~~~~~p~~~G~~i~~k~ 186 (187)
+.+ .......-.+-+++-+....++
T Consensus 173 ~~~-~~~~~~~~~~~~~nEl~y~~~~ 197 (200)
T 3fzg_A 173 SFT-KGWIKILDSKVIGNELVYITSG 197 (200)
T ss_dssp HHT-TTTSCEEEEEEETTEEEEEECC
T ss_pred Hhc-cCcceeeeeeeeCceEEEEEec
Confidence 445 3444555566677777665543
No 107
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.61 E-value=2.8e-15 Score=111.71 Aligned_cols=113 Identities=12% Similarity=0.123 Sum_probs=92.4
Q ss_pred HHHHHHhhcC-CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHh
Q 029836 10 FFSMLLKLIN-AKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (187)
Q Consensus 10 ~l~~l~~~~~-~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~ 88 (187)
-|+.++...+ +.+|+|||||+|++++.+++..+ ..+|+++|+++.+++.|++|++.+++.++++++++|..+.++.
T Consensus 11 RL~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~-- 87 (230)
T 3lec_A 11 RLQKVANYVPKGARLLDVGSDHAYLPIFLLQMGY-CDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE-- 87 (230)
T ss_dssp HHHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTC-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG--
T ss_pred HHHHHHHhCCCCCEEEEECCchHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc--
Confidence 4555665554 56999999999999999998744 5789999999999999999999999988999999999876532
Q ss_pred hcccCCCceeEEEEcCC-CcccHHHHHHHHhcccCCeEEEEeC
Q 029836 89 QDEKYHGTFDFVFVDAD-KDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 89 ~~~~~~~~~D~v~~d~~-~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.++||+|++.+. ..-...+++...+.|+++|.+|+..
T Consensus 88 -----~~~~D~IviaGmGg~lI~~IL~~~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 88 -----ADNIDTITICGMGGRLIADILNNDIDKLQHVKTLVLQP 125 (230)
T ss_dssp -----GGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred -----ccccCEEEEeCCchHHHHHHHHHHHHHhCcCCEEEEEC
Confidence 237999887543 3446778888889999999999754
No 108
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.61 E-value=4.1e-15 Score=117.19 Aligned_cols=115 Identities=17% Similarity=0.180 Sum_probs=87.5
Q ss_pred HHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcC----------CCCceEEEe
Q 029836 8 AQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAG----------VAHKIDFRE 77 (187)
Q Consensus 8 ~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~----------~~~~i~~~~ 77 (187)
...+-..+...++.+|||+|||+|..+..+++..++..+|+++|+++.+++.|+++++..+ ...++++++
T Consensus 94 ~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~ 173 (336)
T 2b25_A 94 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH 173 (336)
T ss_dssp HHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred HHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence 3444444466678899999999999999999875446899999999999999999998643 236899999
Q ss_pred CCchHHHHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEe
Q 029836 78 GPALPLLDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 78 ~d~~~~l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+|+.+..+.+. .++||+|+++... ...+++.+.+.|+|||.+++.
T Consensus 174 ~d~~~~~~~~~-----~~~fD~V~~~~~~--~~~~l~~~~~~LkpgG~lv~~ 218 (336)
T 2b25_A 174 KDISGATEDIK-----SLTFDAVALDMLN--PHVTLPVFYPHLKHGGVCAVY 218 (336)
T ss_dssp SCTTCCC------------EEEEEECSSS--TTTTHHHHGGGEEEEEEEEEE
T ss_pred CChHHcccccC-----CCCeeEEEECCCC--HHHHHHHHHHhcCCCcEEEEE
Confidence 99987543331 4579999998642 233788999999999999863
No 109
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.61 E-value=1e-15 Score=119.00 Aligned_cols=109 Identities=14% Similarity=0.094 Sum_probs=89.0
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCc
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGT 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~ 96 (187)
..++.+|||||||+|..+..++....++.+++++|+++.+++.+++++...+..++++++++|+.+... .++
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--------~~~ 187 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT--------REG 187 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC--------CSC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCc--------cCC
Confidence 356789999999999999998633333689999999999999999999998887789999999976421 468
Q ss_pred eeEEEEcCC------CcccHHHHHHHHhcccCCeEEEEeCcCC
Q 029836 97 FDFVFVDAD------KDNYVNYHKRLIELVKVGGVIGYDNTLW 133 (187)
Q Consensus 97 ~D~v~~d~~------~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
||+|++... ......+++.+.+.|+|||++++.+...
T Consensus 188 fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 188 YDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp EEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred eEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 999998664 1222347999999999999999987654
No 110
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.61 E-value=4.6e-15 Score=112.26 Aligned_cols=112 Identities=17% Similarity=0.139 Sum_probs=91.4
Q ss_pred HHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHc-CCCCceEEEeCCchHH-HH
Q 029836 8 AQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA-GVAHKIDFREGPALPL-LD 85 (187)
Q Consensus 8 ~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~-~~~~~i~~~~~d~~~~-l~ 85 (187)
...+...+...++.+|||+|||+|..+..+++.+.+..+++++|+++.+++.++++++.. + .+++++.++|+.+. ++
T Consensus 85 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~~~~~ 163 (258)
T 2pwy_A 85 ASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEEAELE 163 (258)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGGCCCC
T ss_pred HHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhhcCCC
Confidence 334444445567789999999999999999988544689999999999999999999987 7 47899999998765 22
Q ss_pred HHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 86 QLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 86 ~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.++||+|+++.. ....+++.+.+.|+|||.+++..
T Consensus 164 --------~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 164 --------EAAYDGVALDLM--EPWKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp --------TTCEEEEEEESS--CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred --------CCCcCEEEECCc--CHHHHHHHHHHhCCCCCEEEEEe
Confidence 468999999753 34477889999999999998743
No 111
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.61 E-value=1.3e-14 Score=117.42 Aligned_cols=113 Identities=15% Similarity=0.188 Sum_probs=89.0
Q ss_pred HhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHH-------HHHHHHcCCC-CceEEEeCCchHH---
Q 029836 15 LKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKG-------LPIIQKAGVA-HKIDFREGPALPL--- 83 (187)
Q Consensus 15 ~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a-------~~~~~~~~~~-~~i~~~~~d~~~~--- 83 (187)
+...++.+|||+|||+|..+..++...+ ..+|+++|+++.+++.| +++++..|+. .+++++++|....
T Consensus 238 l~l~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~ 316 (433)
T 1u2z_A 238 CQLKKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNR 316 (433)
T ss_dssp TTCCTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHH
T ss_pred cCCCCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccc
Confidence 3455678999999999999999998755 56899999999999988 8999888853 7899999765421
Q ss_pred HHHHhhcccCCCceeEEEEcCC--CcccHHHHHHHHhcccCCeEEEEeCcCCC
Q 029836 84 LDQLIQDEKYHGTFDFVFVDAD--KDNYVNYHKRLIELVKVGGVIGYDNTLWG 134 (187)
Q Consensus 84 l~~~~~~~~~~~~~D~v~~d~~--~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
++.. .++||+|++... ..+....+..+.+.|+|||.+++.+.+..
T Consensus 317 ~~~~------~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d~f~p 363 (433)
T 1u2z_A 317 VAEL------IPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLKSLRS 363 (433)
T ss_dssp HHHH------GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESSCSSC
T ss_pred cccc------cCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEeeccCC
Confidence 2222 358999998643 34566778899999999999999875543
No 112
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.61 E-value=2.9e-15 Score=111.90 Aligned_cols=106 Identities=12% Similarity=0.114 Sum_probs=86.1
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCc
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGT 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~ 96 (187)
..++.+|||+|||+|+.+..+++..++.++|+++|+++++++.++++.++. .++..+.++..+.... .. ..++
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~~p~~~-~~---~~~~ 147 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDARFPEKY-RH---LVEG 147 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTTCGGGG-TT---TCCC
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEeccCcccc-cc---ccce
Confidence 346789999999999999999998877899999999999999998877654 5888888887653211 10 1578
Q ss_pred eeEEEEcCC-CcccHHHHHHHHhcccCCeEEEEe
Q 029836 97 FDFVFVDAD-KDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 97 ~D~v~~d~~-~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+|+||.|.. +.+...++.++.+.|||||.+++.
T Consensus 148 vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 148 VDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp EEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence 999999876 445667899999999999999875
No 113
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.61 E-value=4.1e-15 Score=115.78 Aligned_cols=106 Identities=18% Similarity=0.182 Sum_probs=85.8
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHH---cCCCCceEEEeCCchHHHHHHhhcccCC
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQK---AGVAHKIDFREGPALPLLDQLIQDEKYH 94 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~---~~~~~~i~~~~~d~~~~l~~~~~~~~~~ 94 (187)
.++++|||||||+|..+..+++..+ ..+++++|+++.+++.+++++.. ....++++++.+|+.+++.... .
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~-----~ 167 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGT-VEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTP-----D 167 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSC-----T
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhcc-----C
Confidence 5678999999999999999997643 68999999999999999998853 2223689999999987765311 4
Q ss_pred CceeEEEEcCCCcc-------cHHHHHHHHhcccCCeEEEEe
Q 029836 95 GTFDFVFVDADKDN-------YVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 95 ~~~D~v~~d~~~~~-------~~~~~~~~~~~L~~gG~lv~~ 129 (187)
++||+|++|..... ...+++.+.+.|+|||++++.
T Consensus 168 ~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 209 (304)
T 3bwc_A 168 NTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQ 209 (304)
T ss_dssp TCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEE
T ss_pred CceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 68999999875211 168899999999999999985
No 114
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.61 E-value=1.1e-14 Score=124.59 Aligned_cols=113 Identities=19% Similarity=0.334 Sum_probs=94.9
Q ss_pred HHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCC-CceEEEeCCchHHHHHHhhc
Q 029836 12 SMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVA-HKIDFREGPALPLLDQLIQD 90 (187)
Q Consensus 12 ~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~-~~i~~~~~d~~~~l~~~~~~ 90 (187)
..+....++++|||+|||+|..++.++... ..+|++||+++.+++.+++|++.+++. .+++++++|+.++++..
T Consensus 532 ~~l~~~~~g~~VLDlg~GtG~~sl~aa~~g--a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~--- 606 (703)
T 3v97_A 532 RMLGQMSKGKDFLNLFSYTGSATVHAGLGG--ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA--- 606 (703)
T ss_dssp HHHHHHCTTCEEEEESCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHC---
T ss_pred HHHHHhcCCCcEEEeeechhHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhc---
Confidence 334445678999999999999999988742 468999999999999999999999986 58999999999887764
Q ss_pred ccCCCceeEEEEcCCC--------------cccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 91 EKYHGTFDFVFVDADK--------------DNYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 91 ~~~~~~~D~v~~d~~~--------------~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
.++||+|++|++. ..+..++..+.++|+|||+|++....
T Consensus 607 ---~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 607 ---NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp ---CCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ---CCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 5789999999862 23566788889999999999987654
No 115
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.61 E-value=1.3e-14 Score=113.28 Aligned_cols=116 Identities=11% Similarity=0.139 Sum_probs=95.5
Q ss_pred HHHHHHHHHhh---cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH
Q 029836 7 EAQFFSMLLKL---INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (187)
Q Consensus 7 ~~~~l~~l~~~---~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 83 (187)
+...+..++.. .++.+|||||||+|..+..+++.. +.+|+++|+++.+++.+++++...++.+++++.++|..+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 152 (318)
T 2fk8_A 75 QYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF 152 (318)
T ss_dssp HHHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC
T ss_pred HHHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC
Confidence 44555565543 356799999999999999999875 4699999999999999999999988878899999998643
Q ss_pred HHHHhhcccCCCceeEEEEcCC-----CcccHHHHHHHHhcccCCeEEEEeCcCCC
Q 029836 84 LDQLIQDEKYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNTLWG 134 (187)
Q Consensus 84 l~~~~~~~~~~~~~D~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
.++||+|++... ..+...+++.+.++|+|||.+++.+....
T Consensus 153 ----------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 198 (318)
T 2fk8_A 153 ----------AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSY 198 (318)
T ss_dssp ----------CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECC
T ss_pred ----------CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccC
Confidence 358999998754 24668899999999999999999776543
No 116
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.60 E-value=2.4e-14 Score=122.44 Aligned_cols=161 Identities=10% Similarity=0.111 Sum_probs=111.2
Q ss_pred HHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHc------CCCCceEEEeCCchHH
Q 029836 10 FFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA------GVAHKIDFREGPALPL 83 (187)
Q Consensus 10 ~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~------~~~~~i~~~~~d~~~~ 83 (187)
++..++...++.+|||+|||+|..+..+++..++..+|+++|+++.+++.|++++... +. .+++++++|+.+.
T Consensus 712 ~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVefiqGDa~dL 790 (950)
T 3htx_A 712 YALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSATLYDGSILEF 790 (950)
T ss_dssp HHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEEEEESCTTSC
T ss_pred HHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceEEEECchHhC
Confidence 3344445567899999999999999999987644579999999999999999977643 33 5899999999764
Q ss_pred HHHHhhcccCCCceeEEEEcCCCcc-----cHHHHHHHHhcccCCeEEEEeCcCCCcc--cc---------CC------C
Q 029836 84 LDQLIQDEKYHGTFDFVFVDADKDN-----YVNYHKRLIELVKVGGVIGYDNTLWGGS--VV---------AP------P 141 (187)
Q Consensus 84 l~~~~~~~~~~~~~D~v~~d~~~~~-----~~~~~~~~~~~L~~gG~lv~~~~~~~~~--~~---------~~------~ 141 (187)
... .++||+|++.....+ ...+++.+.+.|+|| ++++........ .. .+ .
T Consensus 791 p~~-------d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN~lF~~Lnp~tr~~dPd~~~~~~ 862 (950)
T 3htx_A 791 DSR-------LHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFNTILQRSTPETQEENNSEPQLPK 862 (950)
T ss_dssp CTT-------SCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGHHHHTCC------------CCSS
T ss_pred Ccc-------cCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhhhhhhhccccccccccccccccc
Confidence 221 578999998765222 235788999999999 776654322110 00 00 0
Q ss_pred CCCchhhhhhHHHHHHHHHHHHhcCCCeeEEEeecCCe
Q 029836 142 DADLDEHFLYLRDFVQELNKALAVDPRIEICQISIADG 179 (187)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~G 179 (187)
.....+...-.....+.+.+.+....++...+.++|+|
T Consensus 863 fRh~DHrFEWTReEFr~Wae~LAer~GYsVefvGVGDg 900 (950)
T 3htx_A 863 FRNHDHKFEWTREQFNQWASKLGKRHNYSVEFSGVGGS 900 (950)
T ss_dssp CSCSSCSCCBCHHHHHHHHHHHHHHTTEEEEEEEESSC
T ss_pred ccccCcceeecHHHHHHHHHHHHHhcCcEEEEEccCCC
Confidence 00011111223445566666788888999999999887
No 117
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.60 E-value=5.6e-15 Score=118.41 Aligned_cols=106 Identities=23% Similarity=0.367 Sum_probs=90.6
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCcee
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D 98 (187)
++++|||+|||+|..+..++.. ..+|+++|+++.+++.|++|++.+++. +++++++|+.++++.+... .++||
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~-~~~~~~~d~~~~~~~~~~~---~~~fD 281 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLG-NVRVLEANAFDLLRRLEKE---GERFD 281 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCT-TEEEEESCHHHHHHHHHHT---TCCEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCC-CceEEECCHHHHHHHHHhc---CCCee
Confidence 6779999999999999999986 478999999999999999999999984 4999999999887765322 45899
Q ss_pred EEEEcCCC------------cccHHHHHHHHhcccCCeEEEEeCc
Q 029836 99 FVFVDADK------------DNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 99 ~v~~d~~~------------~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
+|++|++. ..+..++..+.++|+|||++++...
T Consensus 282 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 282 LVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC 326 (382)
T ss_dssp EEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 99999863 3456788889999999999988643
No 118
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.60 E-value=2.4e-14 Score=110.16 Aligned_cols=102 Identities=16% Similarity=0.118 Sum_probs=86.3
Q ss_pred hhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
...++.+|||+|||+|..+..+++. +.+|+++|+++.+++.+++++...+. +++++++|..+... .+
T Consensus 117 ~~~~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~--------~~ 183 (286)
T 3m70_A 117 KIISPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANI--------QE 183 (286)
T ss_dssp HHSCSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCC--------CS
T ss_pred hccCCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccc--------cC
Confidence 4457899999999999999999986 46999999999999999999999876 89999999876432 46
Q ss_pred ceeEEEEcCC-----CcccHHHHHHHHhcccCCeEEEEeC
Q 029836 96 TFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 96 ~~D~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
+||+|++... ......+++.+.++|+|||++++..
T Consensus 184 ~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 184 NYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp CEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 8999998764 3446689999999999999976643
No 119
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.60 E-value=1.3e-14 Score=115.55 Aligned_cols=163 Identities=18% Similarity=0.162 Sum_probs=105.4
Q ss_pred HHHHHHhh--cCCCEEEEEccc------ccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCch
Q 029836 10 FFSMLLKL--INAKNTMEIGVF------TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPAL 81 (187)
Q Consensus 10 ~l~~l~~~--~~~~~vLeiG~g------~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~ 81 (187)
++..++.. .++.+||||||| +|..++.+++.+.++++|+++|+++.+.. ..++++++++|+.
T Consensus 205 ~Ye~lL~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~----------~~~rI~fv~GDa~ 274 (419)
T 3sso_A 205 HYDRHFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV----------DELRIRTIQGDQN 274 (419)
T ss_dssp HHHHHHGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG----------CBTTEEEEECCTT
T ss_pred HHHHHHHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh----------cCCCcEEEEeccc
Confidence 44444432 367899999999 66667777655323789999999999731 2368999999997
Q ss_pred HH--HHHHhhcccCCCceeEEEEcCCC--cccHHHHHHHHhcccCCeEEEEeCcCCCccccC-CCCCCchhhhhhHHHHH
Q 029836 82 PL--LDQLIQDEKYHGTFDFVFVDADK--DNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVA-PPDADLDEHFLYLRDFV 156 (187)
Q Consensus 82 ~~--l~~~~~~~~~~~~~D~v~~d~~~--~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 156 (187)
+. ...+... .++||+|+.+..+ .+....|+++.++|||||++++.|+.+...... ....+ ......+...+
T Consensus 275 dlpf~~~l~~~---d~sFDlVisdgsH~~~d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~-~~~~~tii~~l 350 (419)
T 3sso_A 275 DAEFLDRIARR---YGPFDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADP-QECSGTSLGLL 350 (419)
T ss_dssp CHHHHHHHHHH---HCCEEEEEECSCCCHHHHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSST-TCCTTSHHHHH
T ss_pred ccchhhhhhcc---cCCccEEEECCcccchhHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccC-CcchhHHHHHH
Confidence 63 3222211 3689999998763 446788999999999999999999873211110 00000 01224566777
Q ss_pred HHHHHHHhcC---------CCee---EEEeecCCeeEEEEEc
Q 029836 157 QELNKALAVD---------PRIE---ICQISIADGVTLCRRI 186 (187)
Q Consensus 157 ~~~~~~~~~~---------~~~~---~~~~p~~~G~~i~~k~ 186 (187)
+++.+.+... |.+. ..-+.+=+++.+..|.
T Consensus 351 k~l~D~l~~~~~~~~~~~~~~~~~~~~~~~h~y~~i~~~~kg 392 (419)
T 3sso_A 351 KSLIDAIQHQELPSDPNRSPGYVDRNIVGLHVYHNVAFVEKG 392 (419)
T ss_dssp HHHHHHHTGGGSCCCTTCCCCHHHHHEEEEEEETTEEEEEES
T ss_pred HHHHHHhcccccCCCcCCCCCccccceeEEEecCcEEEEEec
Confidence 7776666532 1221 3445666777777664
No 120
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.60 E-value=3.3e-15 Score=116.52 Aligned_cols=108 Identities=11% Similarity=0.140 Sum_probs=90.5
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..+..+++.. +.+|+++|+++.+++.|+++++..++.++++++++|+.+. + + ..++|
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~-----~~~~f 186 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDT-P-F-----DKGAV 186 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-C-C-----CTTCE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcC-C-C-----CCCCE
Confidence 446799999999999999999874 4789999999999999999999999888999999999753 1 1 14789
Q ss_pred eEEEEcCC--CcccHHHHHHHHhcccCCeEEEEeCcCCC
Q 029836 98 DFVFVDAD--KDNYVNYHKRLIELVKVGGVIGYDNTLWG 134 (187)
Q Consensus 98 D~v~~d~~--~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
|+|++... .-+...+++.+.++|||||.+++.+....
T Consensus 187 D~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 225 (312)
T 3vc1_A 187 TASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGCWN 225 (312)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred eEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEcccc
Confidence 99998654 22478899999999999999998665443
No 121
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.60 E-value=3.3e-15 Score=119.43 Aligned_cols=103 Identities=13% Similarity=0.074 Sum_probs=86.3
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCC--ceEEEeCCchHHHHHHhhcccCCC
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAH--KIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~--~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
.++.+|||+|||+|..+..+++..| +.+|+++|+++.+++.++++++.+++.. +++++.+|..+.++ .+
T Consensus 221 ~~~~~VLDlGcG~G~~s~~la~~~p-~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~--------~~ 291 (375)
T 4dcm_A 221 NLEGEIVDLGCGNGVIGLTLLDKNP-QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE--------PF 291 (375)
T ss_dssp SCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCC--------TT
T ss_pred cCCCeEEEEeCcchHHHHHHHHHCC-CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCC--------CC
Confidence 3457999999999999999999876 6899999999999999999999988753 58889999876432 46
Q ss_pred ceeEEEEcCCC--------cccHHHHHHHHhcccCCeEEEEe
Q 029836 96 TFDFVFVDADK--------DNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 96 ~~D~v~~d~~~--------~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+||+|+++++. .....+++.+.+.|+|||.+++.
T Consensus 292 ~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 292 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp CEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 89999998651 12246889999999999999873
No 122
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.60 E-value=1.8e-15 Score=111.66 Aligned_cols=108 Identities=14% Similarity=0.202 Sum_probs=86.0
Q ss_pred HHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhh
Q 029836 10 FFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQ 89 (187)
Q Consensus 10 ~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~ 89 (187)
++..++...++.+|||+|||+|..+..+++. ..+++++|+++.+++.+++++... .+++++++|..+..+
T Consensus 42 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~---- 111 (216)
T 3ofk_A 42 LLRLSLSSGAVSNGLEIGCAAGAFTEKLAPH---CKRLTVIDVMPRAIGRACQRTKRW---SHISWAATDILQFST---- 111 (216)
T ss_dssp HHHHHTTTSSEEEEEEECCTTSHHHHHHGGG---EEEEEEEESCHHHHHHHHHHTTTC---SSEEEEECCTTTCCC----
T ss_pred HHHHHcccCCCCcEEEEcCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcccC---CCeEEEEcchhhCCC----
Confidence 3443444455679999999999999999876 368999999999999999988664 489999999976542
Q ss_pred cccCCCceeEEEEcCCC------cccHHHHHHHHhcccCCeEEEEeCc
Q 029836 90 DEKYHGTFDFVFVDADK------DNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 90 ~~~~~~~~D~v~~d~~~------~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.++||+|++.... .....+++.+.++|+|||++++...
T Consensus 112 ----~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 112 ----AELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp ----SCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ----CCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 5789999987541 2235679999999999999998653
No 123
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.60 E-value=2.8e-15 Score=112.13 Aligned_cols=105 Identities=17% Similarity=0.134 Sum_probs=87.0
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCcee
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D 98 (187)
++.+|||+|||+|..+..++.. +.+|+++|+++.+++.+++++...+...+++++++|+.+..+ .++||
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--------~~~fD 134 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP---ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP--------TELFD 134 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT---TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC--------SSCEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC--------CCCee
Confidence 4569999999999999988752 679999999999999999999876665789999999976432 46899
Q ss_pred EEEEcCC-----CcccHHHHHHHHhcccCCeEEEEeCcCCC
Q 029836 99 FVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNTLWG 134 (187)
Q Consensus 99 ~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
+|++... .+....+++.+.++|+|||++++......
T Consensus 135 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 175 (235)
T 3lcc_A 135 LIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPIT 175 (235)
T ss_dssp EEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCS
T ss_pred EEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEeccc
Confidence 9997654 23667899999999999999998665443
No 124
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.60 E-value=3.7e-15 Score=111.81 Aligned_cols=108 Identities=14% Similarity=0.136 Sum_probs=87.1
Q ss_pred HHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHh
Q 029836 9 QFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (187)
Q Consensus 9 ~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~ 88 (187)
.++..+....++.+|||||||+|..+..+++.. .+++++|+++.+++.|+++... +++++++|+.+..+
T Consensus 32 ~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~~~--- 100 (250)
T 2p7i_A 32 FMVRAFTPFFRPGNLLELGSFKGDFTSRLQEHF---NDITCVEASEEAISHAQGRLKD-----GITYIHSRFEDAQL--- 100 (250)
T ss_dssp HHHHHHGGGCCSSCEEEESCTTSHHHHHHTTTC---SCEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGCCC---
T ss_pred HHHHHHHhhcCCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHcCc---
Confidence 344455455678899999999999999998763 4799999999999999887632 79999999976621
Q ss_pred hcccCCCceeEEEEcCC---CcccHHHHHHHH-hcccCCeEEEEeCcC
Q 029836 89 QDEKYHGTFDFVFVDAD---KDNYVNYHKRLI-ELVKVGGVIGYDNTL 132 (187)
Q Consensus 89 ~~~~~~~~~D~v~~d~~---~~~~~~~~~~~~-~~L~~gG~lv~~~~~ 132 (187)
+++||+|++... ..+...+++++. ++|||||.+++....
T Consensus 101 -----~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 101 -----PRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp -----SSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred -----CCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 578999998765 345678999999 999999999986643
No 125
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.60 E-value=6.9e-15 Score=111.03 Aligned_cols=105 Identities=19% Similarity=0.208 Sum_probs=85.7
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHc--------CCCCceEEEeCCchHHHHHHhhc
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA--------GVAHKIDFREGPALPLLDQLIQD 90 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~--------~~~~~i~~~~~d~~~~l~~~~~~ 90 (187)
++.+|||||||+|..+..++...+ ..+++++|+++.+++.++++++.. ++ .+++++++|+.+.++...
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-~nv~~~~~D~~~~l~~~~-- 124 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFP-EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF-QNINVLRGNAMKFLPNFF-- 124 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHST-TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT-TTEEEEECCTTSCGGGTS--
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCC-CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC-CcEEEEeccHHHHHHHhc--
Confidence 567899999999999999999876 679999999999999999998876 66 589999999987555432
Q ss_pred ccCCCceeEEEEcCCCc-----------ccHHHHHHHHhcccCCeEEEEe
Q 029836 91 EKYHGTFDFVFVDADKD-----------NYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 91 ~~~~~~~D~v~~d~~~~-----------~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
..+++|.|++..+.. ....+++.+.++|+|||++++.
T Consensus 125 --~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 125 --EKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp --CTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred --cccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 146899998654311 1258999999999999999873
No 126
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.60 E-value=1.2e-14 Score=116.79 Aligned_cols=105 Identities=22% Similarity=0.326 Sum_probs=86.5
Q ss_pred hhcC-CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCC
Q 029836 16 KLIN-AKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYH 94 (187)
Q Consensus 16 ~~~~-~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~ 94 (187)
...+ +++|||+|||+|..++.++.. +.+|+++|+++.+++.+++|++.+++.. ++.++|+.++++.. .
T Consensus 210 ~~~~~g~~VLDlg~GtG~~sl~~a~~---ga~V~avDis~~al~~a~~n~~~ng~~~--~~~~~D~~~~l~~~------~ 278 (393)
T 4dmg_A 210 AMVRPGERVLDVYSYVGGFALRAARK---GAYALAVDKDLEALGVLDQAALRLGLRV--DIRHGEALPTLRGL------E 278 (393)
T ss_dssp TTCCTTCEEEEESCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCCC--EEEESCHHHHHHTC------C
T ss_pred HHhcCCCeEEEcccchhHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHhCCCC--cEEEccHHHHHHHh------c
Confidence 3344 789999999999999999985 3459999999999999999999998854 46699998887654 3
Q ss_pred CceeEEEEcCCC------------cccHHHHHHHHhcccCCeEEEEeCc
Q 029836 95 GTFDFVFVDADK------------DNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 95 ~~~D~v~~d~~~------------~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
+.||+|++|++. ..+..++..+.++|+|||+|++..+
T Consensus 279 ~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~ 327 (393)
T 4dmg_A 279 GPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSC 327 (393)
T ss_dssp CCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 459999999863 2456788888999999999985443
No 127
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.60 E-value=2.3e-15 Score=115.44 Aligned_cols=106 Identities=14% Similarity=0.223 Sum_probs=87.6
Q ss_pred HHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHc-CCCCceEEEeCCchHHHHHHhhccc
Q 029836 14 LLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA-GVAHKIDFREGPALPLLDQLIQDEK 92 (187)
Q Consensus 14 l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~-~~~~~i~~~~~d~~~~l~~~~~~~~ 92 (187)
.+...++.+|||+|||+|..+..+++.+.++.+++++|+++.+++.++++++.. +. +++++.++|+.+.++
T Consensus 105 ~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~~~~------- 176 (275)
T 1yb2_A 105 RCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIADFIS------- 176 (275)
T ss_dssp -CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTTCCC-------
T ss_pred HcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhccCc-------
Confidence 334456789999999999999999987433689999999999999999999987 74 689999999976332
Q ss_pred CCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 93 YHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 93 ~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.++||+|+++.. +...+++.+.+.|+|||.+++..
T Consensus 177 -~~~fD~Vi~~~~--~~~~~l~~~~~~LkpgG~l~i~~ 211 (275)
T 1yb2_A 177 -DQMYDAVIADIP--DPWNHVQKIASMMKPGSVATFYL 211 (275)
T ss_dssp -SCCEEEEEECCS--CGGGSHHHHHHTEEEEEEEEEEE
T ss_pred -CCCccEEEEcCc--CHHHHHHHHHHHcCCCCEEEEEe
Confidence 468999999653 44578899999999999999754
No 128
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.60 E-value=5.4e-15 Score=110.11 Aligned_cols=103 Identities=17% Similarity=0.187 Sum_probs=84.0
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHH--HHHhhcccCCC
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL--DQLIQDEKYHG 95 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l--~~~~~~~~~~~ 95 (187)
.++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.++++.+.. ++++++++|+.+.. ... .+
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~~------~~ 142 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYRAL------VP 142 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGTTT------CC
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhhcc------cC
Confidence 35679999999999999999987654689999999999999999888654 68999999987632 112 45
Q ss_pred ceeEEEEcCCCcccH-HHHHHHHhcccCCeEEEEe
Q 029836 96 TFDFVFVDADKDNYV-NYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 96 ~~D~v~~d~~~~~~~-~~~~~~~~~L~~gG~lv~~ 129 (187)
+||+|+++....... .++..+.+.|+|||.+++.
T Consensus 143 ~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 143 KVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 899999987644443 4489999999999999986
No 129
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.60 E-value=5.2e-15 Score=111.10 Aligned_cols=113 Identities=11% Similarity=0.138 Sum_probs=91.8
Q ss_pred HHHHHHhhcC-CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHh
Q 029836 10 FFSMLLKLIN-AKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (187)
Q Consensus 10 ~l~~l~~~~~-~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~ 88 (187)
-|+.++...+ +.+|||||||+|++++.+++..+ ..+|+++|+++.+++.|++|++.+++.++++++++|..+.+..
T Consensus 11 RL~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~-- 87 (244)
T 3gnl_A 11 RLEKVASYITKNERIADIGSDHAYLPCFAVKNQT-ASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK-- 87 (244)
T ss_dssp HHHHHHTTCCSSEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG--
T ss_pred HHHHHHHhCCCCCEEEEECCccHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc--
Confidence 3555555554 46999999999999999998754 5789999999999999999999999988899999999876531
Q ss_pred hcccCCCceeEEEEcCC-CcccHHHHHHHHhcccCCeEEEEeC
Q 029836 89 QDEKYHGTFDFVFVDAD-KDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 89 ~~~~~~~~~D~v~~d~~-~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.++||+|++.+. ..-...+++...+.|++++.+|+..
T Consensus 88 -----~~~~D~IviagmGg~lI~~IL~~~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 88 -----KDAIDTIVIAGMGGTLIRTILEEGAAKLAGVTKLILQP 125 (244)
T ss_dssp -----GGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred -----cccccEEEEeCCchHHHHHHHHHHHHHhCCCCEEEEEc
Confidence 235999886442 4456778888889999999999754
No 130
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.60 E-value=1.1e-14 Score=109.53 Aligned_cols=113 Identities=19% Similarity=0.328 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHH
Q 029836 5 PDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL 84 (187)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l 84 (187)
+.....+...+...++.+|||+|||+|..+..+++. ..+++++|+++++++.|+++++..++.+++++.++|..+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 153 (248)
T 2yvl_A 77 PKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE 153 (248)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC
T ss_pred chhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc
Confidence 444445555555567789999999999999999987 57999999999999999999999888778999999987643
Q ss_pred -HHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 85 -DQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 85 -~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
+ .++||+|+.+.. ....+++.+.+.|+|||.+++..
T Consensus 154 ~~--------~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~ 190 (248)
T 2yvl_A 154 VP--------EGIFHAAFVDVR--EPWHYLEKVHKSLMEGAPVGFLL 190 (248)
T ss_dssp CC--------TTCBSEEEECSS--CGGGGHHHHHHHBCTTCEEEEEE
T ss_pred cC--------CCcccEEEECCc--CHHHHHHHHHHHcCCCCEEEEEe
Confidence 2 458999999754 44567888999999999998743
No 131
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.59 E-value=6.6e-15 Score=112.87 Aligned_cols=103 Identities=14% Similarity=0.117 Sum_probs=88.5
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.++++|||+|||+|..++.+++.. ..+|+++|++|.+++.+++|++.+++.++++++++|+.++.+ .+.|
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g--~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~--------~~~~ 193 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYG--KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--------ENIA 193 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHT--CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--------CSCE
T ss_pred CCCCEEEEecCcCcHHHHHHHHhc--CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc--------ccCC
Confidence 457899999999999999999762 479999999999999999999999999999999999987653 5689
Q ss_pred eEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 98 DFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 98 D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
|.|+++.+.. ...+++.+.++|++||+|.++..
T Consensus 194 D~Vi~~~p~~-~~~~l~~a~~~lk~gG~ih~~~~ 226 (278)
T 3k6r_A 194 DRILMGYVVR-THEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp EEEEECCCSS-GGGGHHHHHHHEEEEEEEEEEEE
T ss_pred CEEEECCCCc-HHHHHHHHHHHcCCCCEEEEEee
Confidence 9999987533 34678888899999999987543
No 132
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.59 E-value=1.3e-14 Score=107.19 Aligned_cols=102 Identities=16% Similarity=0.159 Sum_probs=79.8
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHH--HHhhcccCCC
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLD--QLIQDEKYHG 95 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~--~~~~~~~~~~ 95 (187)
.++.+|||+|||+|..+..+++..+ .++|+++|+++.+++.+.+..+.. .++.++.+|+.+... .+ .+
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~------~~ 125 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYSGI------VE 125 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTTTT------CC
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhccc------cc
Confidence 3567999999999999999998876 689999999999887666655543 478888888865311 11 46
Q ss_pred ceeEEEEcCCCcc-cHHHHHHHHhcccCCeEEEEe
Q 029836 96 TFDFVFVDADKDN-YVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 96 ~~D~v~~d~~~~~-~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+||+|+++..... ...+++++.+.|||||.+++.
T Consensus 126 ~fD~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 126 KVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceeEEEEeccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 8999999865333 334589999999999999986
No 133
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.59 E-value=1.2e-14 Score=108.07 Aligned_cols=103 Identities=18% Similarity=0.264 Sum_probs=83.7
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCC----CCceEEEeCCchHHHHHHhhccc
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGV----AHKIDFREGPALPLLDQLIQDEK 92 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~----~~~i~~~~~d~~~~l~~~~~~~~ 92 (187)
..++.+|||+|||+|..+..+++.+++..+|+++|+++.+++.+++++...+. ..++++.++|.......
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~------ 148 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAE------ 148 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGG------
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCccc------
Confidence 44678999999999999999998764457999999999999999999988664 36899999998643221
Q ss_pred CCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEe
Q 029836 93 YHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 93 ~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
.++||+|+++...... ++.+.+.|+|||.+++.
T Consensus 149 -~~~fD~i~~~~~~~~~---~~~~~~~LkpgG~lv~~ 181 (226)
T 1i1n_A 149 -EAPYDAIHVGAAAPVV---PQALIDQLKPGGRLILP 181 (226)
T ss_dssp -GCCEEEEEECSBBSSC---CHHHHHTEEEEEEEEEE
T ss_pred -CCCcCEEEECCchHHH---HHHHHHhcCCCcEEEEE
Confidence 4589999998764333 45778999999999985
No 134
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.59 E-value=1e-14 Score=115.75 Aligned_cols=118 Identities=16% Similarity=0.153 Sum_probs=95.4
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 83 (187)
.+.....+-.++...++.+|||+|||+|..+++++...++..+++++|+++.+++.|++|++..++. ++++.++|+.++
T Consensus 188 ~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~ 266 (354)
T 3tma_A 188 TPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHL 266 (354)
T ss_dssp CHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGG
T ss_pred CHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhC
Confidence 4445555555556667789999999999999999987623689999999999999999999999986 999999999875
Q ss_pred HHHHhhcccCCCceeEEEEcCCCc-----------ccHHHHHHHHhcccCCeEEEEe
Q 029836 84 LDQLIQDEKYHGTFDFVFVDADKD-----------NYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 84 l~~~~~~~~~~~~~D~v~~d~~~~-----------~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
... .+.||+|++|++.. .+..+++.+.++|+|||.+++.
T Consensus 267 ~~~-------~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 316 (354)
T 3tma_A 267 PRF-------FPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALL 316 (354)
T ss_dssp GGT-------CCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEE
T ss_pred ccc-------cCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 332 35689999987621 1367888899999999999874
No 135
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.59 E-value=1.9e-14 Score=108.59 Aligned_cols=109 Identities=21% Similarity=0.307 Sum_probs=87.5
Q ss_pred HHHHHHHHhh---cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHH
Q 029836 8 AQFFSMLLKL---INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL 84 (187)
Q Consensus 8 ~~~l~~l~~~---~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l 84 (187)
..++..++.. .++.+|||+|||+|..+..+++. +.+++++|+++.+++.++++....+. +++++++|..+..
T Consensus 27 ~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~ 101 (252)
T 1wzn_A 27 IDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIA 101 (252)
T ss_dssp HHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCC
T ss_pred HHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhcc
Confidence 4555555544 34579999999999999999875 57999999999999999999988765 7999999997642
Q ss_pred HHHhhcccCCCceeEEEEcCC------CcccHHHHHHHHhcccCCeEEEEe
Q 029836 85 DQLIQDEKYHGTFDFVFVDAD------KDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~v~~d~~------~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
. .++||+|++... ......+++.+.+.|+|||+++++
T Consensus 102 ~--------~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 102 F--------KNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp C--------CSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred c--------CCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 1 468999997532 134567889999999999999975
No 136
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.59 E-value=2.3e-15 Score=113.14 Aligned_cols=116 Identities=11% Similarity=0.182 Sum_probs=89.2
Q ss_pred HHHHHHHHHhhc----CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchH
Q 029836 7 EAQFFSMLLKLI----NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP 82 (187)
Q Consensus 7 ~~~~l~~l~~~~----~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~ 82 (187)
...++..++... ++.+|||||||+|..+..+++.. ..+++++|+++.+++.+++++...+ ..+++++++|..+
T Consensus 63 ~~~~~~~l~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~ 139 (241)
T 2ex4_A 63 SRKFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQD 139 (241)
T ss_dssp HHHHHHGGGC----CCCCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGG
T ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhh
Confidence 445556555433 47899999999999999988764 4699999999999999999987764 2578999999865
Q ss_pred HHHHHhhcccCCCceeEEEEcCCC-----cccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 83 LLDQLIQDEKYHGTFDFVFVDADK-----DNYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 83 ~l~~~~~~~~~~~~~D~v~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
... ..++||+|++.... .....+++.+.++|+|||++++.+..
T Consensus 140 ~~~-------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 140 FTP-------EPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp CCC-------CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cCC-------CCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 421 04589999988652 12457899999999999999986543
No 137
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.59 E-value=1.1e-14 Score=109.01 Aligned_cols=113 Identities=19% Similarity=0.286 Sum_probs=89.1
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 83 (187)
.+.....+..++...++.+|||+|||+|..+..+++..+ .+++++|+++.+++.++++++..+. .++++..+|....
T Consensus 76 ~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~ 152 (235)
T 1jg1_A 76 APHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGV-KNVHVILGDGSKG 152 (235)
T ss_dssp CHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTC-CSEEEEESCGGGC
T ss_pred cHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCC-CCcEEEECCcccC
Confidence 445555555556666778999999999999999998764 7899999999999999999999887 4699999997433
Q ss_pred HHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEe
Q 029836 84 LDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 84 l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
++. ..+||+|+++....... +.+.+.|+|||.+++.
T Consensus 153 ~~~-------~~~fD~Ii~~~~~~~~~---~~~~~~L~pgG~lvi~ 188 (235)
T 1jg1_A 153 FPP-------KAPYDVIIVTAGAPKIP---EPLIEQLKIGGKLIIP 188 (235)
T ss_dssp CGG-------GCCEEEEEECSBBSSCC---HHHHHTEEEEEEEEEE
T ss_pred CCC-------CCCccEEEECCcHHHHH---HHHHHhcCCCcEEEEE
Confidence 321 24699999987644333 3678899999999874
No 138
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.59 E-value=1.1e-14 Score=108.91 Aligned_cols=103 Identities=15% Similarity=0.149 Sum_probs=82.9
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH--HHHHhhcccCCC
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDEKYHG 95 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--l~~~~~~~~~~~ 95 (187)
.+..+|||+|||+|..+..+++..++..+|+++|+++.+++.+.++.+.. .+++++++|+.+. ++.. .+
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~------~~ 146 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRML------IA 146 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGG------CC
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhccc------CC
Confidence 35679999999999999999988644689999999999888888777765 5899999999763 2222 56
Q ss_pred ceeEEEEcCCC-cccHHHHHHHHhcccCCeEEEEe
Q 029836 96 TFDFVFVDADK-DNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 96 ~~D~v~~d~~~-~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+||+|+++... .....++..+.+.|+|||++++.
T Consensus 147 ~~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 147 MVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp CEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEEEEcCCCccHHHHHHHHHHHHcCCCeEEEEE
Confidence 89999998763 23345678899999999999983
No 139
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.58 E-value=4.9e-15 Score=110.73 Aligned_cols=104 Identities=14% Similarity=0.041 Sum_probs=83.3
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..+..+++..+ .++|+++|+++.+++.++++.+.. ++++++.+|+.+...... . .++|
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~-~---~~~~ 144 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEYAN-I---VEKV 144 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGGTT-T---SCCE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCcccccc-c---CccE
Confidence 3567999999999999999999876 689999999999999999887654 689999999875211010 0 3589
Q ss_pred eEEEEcCC-CcccHHHHHHHHhcccCCeEEEEe
Q 029836 98 DFVFVDAD-KDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 98 D~v~~d~~-~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
|+|+.+.. +.....+++.+.+.|+|||.+++.
T Consensus 145 D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 145 DVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 99997754 333467799999999999999985
No 140
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.58 E-value=1.1e-14 Score=111.65 Aligned_cols=117 Identities=16% Similarity=0.159 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHc-C-CCCceEEEeCCchH
Q 029836 5 PDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA-G-VAHKIDFREGPALP 82 (187)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~-~-~~~~i~~~~~d~~~ 82 (187)
+.....+...+...++.+|||+|||+|..+..+++.+.+..+++++|+++.+++.|+++++.. + +.+++++.++|+.+
T Consensus 85 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~ 164 (280)
T 1i9g_A 85 PKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD 164 (280)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG
T ss_pred HHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh
Confidence 434444444445567789999999999999999986544689999999999999999999887 5 45789999999876
Q ss_pred HHHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 83 LLDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 83 ~l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.. + ..++||+|+++.. +...+++.+.+.|+|||.+++..
T Consensus 165 ~~--~-----~~~~~D~v~~~~~--~~~~~l~~~~~~L~pgG~l~~~~ 203 (280)
T 1i9g_A 165 SE--L-----PDGSVDRAVLDML--APWEVLDAVSRLLVAGGVLMVYV 203 (280)
T ss_dssp CC--C-----CTTCEEEEEEESS--CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred cC--C-----CCCceeEEEECCc--CHHHHHHHHHHhCCCCCEEEEEe
Confidence 41 1 0468999999764 34477889999999999998743
No 141
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.58 E-value=6.8e-15 Score=117.93 Aligned_cols=117 Identities=15% Similarity=0.276 Sum_probs=91.6
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHc-----C-C-CCceEEEeCCchHHHHHHhh
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA-----G-V-AHKIDFREGPALPLLDQLIQ 89 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~-----~-~-~~~i~~~~~d~~~~l~~~~~ 89 (187)
..++.+|||+|||+|..+..+++.+++..+|+++|+++.+++.++++++.. | . .++++++++|+.+.... ..
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~-~~ 159 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATA-EP 159 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGC-BS
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhc-cc
Confidence 346789999999999999999988754689999999999999999998765 3 2 26899999999764210 00
Q ss_pred cccCCCceeEEEEcCC---CcccHHHHHHHHhcccCCeEEEEeCcCCC
Q 029836 90 DEKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTLWG 134 (187)
Q Consensus 90 ~~~~~~~~D~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
.....++||+|++... ..+...+++.+.++|||||++++.+....
T Consensus 160 ~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 207 (383)
T 4fsd_A 160 EGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYAD 207 (383)
T ss_dssp CCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred CCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccc
Confidence 0001468999998865 34578899999999999999999776543
No 142
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.58 E-value=3.6e-14 Score=109.34 Aligned_cols=118 Identities=15% Similarity=0.132 Sum_probs=92.0
Q ss_pred HHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCC---CceEEEeCCchH
Q 029836 6 DEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVA---HKIDFREGPALP 82 (187)
Q Consensus 6 ~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~---~~i~~~~~d~~~ 82 (187)
....++..++...++.+|||||||+|..+..+++. +.+|+++|+++.+++.|+++....+.. .++.+..+|..+
T Consensus 44 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~ 120 (293)
T 3thr_A 44 EYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLT 120 (293)
T ss_dssp HHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG
T ss_pred HHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhh
Confidence 34556666666678899999999999999999986 459999999999999999887554432 468889999876
Q ss_pred HHHHHhhcccCCCceeEEEEcC-C---Ccc-------cHHHHHHHHhcccCCeEEEEeC
Q 029836 83 LLDQLIQDEKYHGTFDFVFVDA-D---KDN-------YVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 83 ~l~~~~~~~~~~~~~D~v~~d~-~---~~~-------~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
....+. ..++||+|++.+ . ..+ ...+++.+.++|+|||++++..
T Consensus 121 ~~~~~~----~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 121 LDKDVP----AGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp HHHHSC----CTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred Cccccc----cCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 542221 157899999862 2 233 6789999999999999999864
No 143
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.58 E-value=3.7e-14 Score=113.40 Aligned_cols=112 Identities=14% Similarity=0.076 Sum_probs=87.7
Q ss_pred hhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHH-------HHcCC-CCceEEEeCCchHHH-HH
Q 029836 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPII-------QKAGV-AHKIDFREGPALPLL-DQ 86 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~-------~~~~~-~~~i~~~~~d~~~~l-~~ 86 (187)
...+..+|||+|||+|..++.++...+ ..+++|||+++.+++.|+++. +..|+ ..+++|+++|+.+.. +.
T Consensus 170 ~l~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d 248 (438)
T 3uwp_A 170 KMTDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRE 248 (438)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCcccc
Confidence 455678999999999999999997765 467999999999999998765 34455 368999999997642 11
Q ss_pred HhhcccCCCceeEEEEcCC--CcccHHHHHHHHhcccCCeEEEEeCcCCC
Q 029836 87 LIQDEKYHGTFDFVFVDAD--KDNYVNYHKRLIELVKVGGVIGYDNTLWG 134 (187)
Q Consensus 87 ~~~~~~~~~~~D~v~~d~~--~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
. ...+|+||+... ..+....+.++.+.|||||.||+.+.+..
T Consensus 249 ~------~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 249 R------IANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp H------HHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred c------cCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 1 147999998754 34566777888899999999999876554
No 144
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.57 E-value=2.8e-14 Score=108.98 Aligned_cols=111 Identities=12% Similarity=0.091 Sum_probs=86.4
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCch------HHHHHHHHHHHcCCCCceEEEeCC-chH-HHHHHh
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKE------HYEKGLPIIQKAGVAHKIDFREGP-ALP-LLDQLI 88 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~------~~~~a~~~~~~~~~~~~i~~~~~d-~~~-~l~~~~ 88 (187)
..++.+|||||||+|..+..+++..++..+++++|+++. +++.++++++..++.+++++.++| ... .++ +.
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~ 119 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGP-IA 119 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGG-GT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCC-CC
Confidence 346789999999999999999987643589999999997 999999999988877789999998 321 111 11
Q ss_pred hcccCCCceeEEEEcCC---CcccHHHHHHHHhcccCCeEEEEeCcCC
Q 029836 89 QDEKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTLW 133 (187)
Q Consensus 89 ~~~~~~~~~D~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
.++||+|++... ..+...+++.+..++++||.+++.+...
T Consensus 120 -----~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 120 -----DQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp -----TCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECS
T ss_pred -----CCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 468999998765 2334456677777777899999977654
No 145
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.57 E-value=1.8e-14 Score=115.32 Aligned_cols=114 Identities=12% Similarity=0.142 Sum_probs=93.4
Q ss_pred CHHHHHHHHHHHhhc-----CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeC
Q 029836 4 SPDEAQFFSMLLKLI-----NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREG 78 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~-----~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~ 78 (187)
.+....++..+.... ++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++++.++. +++++++
T Consensus 213 d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~--~v~~~~~ 287 (381)
T 3dmg_A 213 DPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANAL--KAQALHS 287 (381)
T ss_dssp CHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTC--CCEEEEC
T ss_pred CHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCC--CeEEEEc
Confidence 456666777776543 5679999999999999999986 46999999999999999999999886 4899999
Q ss_pred CchHHHHHHhhcccCCCceeEEEEcCCC--------cccHHHHHHHHhcccCCeEEEEe
Q 029836 79 PALPLLDQLIQDEKYHGTFDFVFVDADK--------DNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 79 d~~~~l~~~~~~~~~~~~~D~v~~d~~~--------~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
|..+.... .++||+|+++.+. .....+++.+.+.|+|||.+++.
T Consensus 288 D~~~~~~~-------~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv 339 (381)
T 3dmg_A 288 DVDEALTE-------EARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLV 339 (381)
T ss_dssp STTTTSCT-------TCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhhcccc-------CCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 99765431 3689999998651 23467889999999999999874
No 146
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.57 E-value=1.8e-14 Score=105.24 Aligned_cols=110 Identities=13% Similarity=-0.008 Sum_probs=88.4
Q ss_pred HHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHH
Q 029836 7 EAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQ 86 (187)
Q Consensus 7 ~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~ 86 (187)
...++..+.... +.+|||+|||+|..+..++.. +.+++++|+++.+++.++++. ++++++++|+.+. +
T Consensus 30 ~~~~l~~~~~~~-~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~- 97 (203)
T 3h2b_A 30 DRVLIEPWATGV-DGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQTH------PSVTFHHGTITDL-S- 97 (203)
T ss_dssp THHHHHHHHHHC-CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHHC------TTSEEECCCGGGG-G-
T ss_pred HHHHHHHHhccC-CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC------CCCeEEeCccccc-c-
Confidence 345666665544 889999999999999999876 468999999999999998863 5799999999764 2
Q ss_pred HhhcccCCCceeEEEEcCC-----CcccHHHHHHHHhcccCCeEEEEeCcCC
Q 029836 87 LIQDEKYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNTLW 133 (187)
Q Consensus 87 ~~~~~~~~~~~D~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
.. .++||+|++... .++...+++.+.+.|+|||.+++.....
T Consensus 98 ~~-----~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 144 (203)
T 3h2b_A 98 DS-----PKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSG 144 (203)
T ss_dssp GS-----CCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred cC-----CCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccC
Confidence 11 578999998654 2467889999999999999999876543
No 147
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.57 E-value=1.4e-14 Score=111.33 Aligned_cols=108 Identities=15% Similarity=0.104 Sum_probs=90.5
Q ss_pred HhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcC----CCCceEEEeCCchHHHHHHhhc
Q 029836 15 LKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAG----VAHKIDFREGPALPLLDQLIQD 90 (187)
Q Consensus 15 ~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~----~~~~i~~~~~d~~~~l~~~~~~ 90 (187)
+...+|++||-||.|.|..+.++++..+ ..+++.||+++..++.+++.+.... ..+|++++.+|+..++...
T Consensus 79 ~~~p~pk~VLIiGgGdG~~~revlk~~~-v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~--- 154 (294)
T 3o4f_A 79 LAHGHAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT--- 154 (294)
T ss_dssp HHSSCCCEEEEESCTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCS---
T ss_pred hhCCCCCeEEEECCCchHHHHHHHHcCC-cceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhc---
Confidence 3456899999999999999999998744 6899999999999999999986531 1379999999999888653
Q ss_pred ccCCCceeEEEEcCCC-------cccHHHHHHHHhcccCCeEEEEe
Q 029836 91 EKYHGTFDFVFVDADK-------DNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 91 ~~~~~~~D~v~~d~~~-------~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
.++||+|++|... -...++++.+.+.|+|||+++..
T Consensus 155 ---~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 155 ---SQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp ---SCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEE
T ss_pred ---cccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEe
Confidence 6789999999751 12468999999999999999963
No 148
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.57 E-value=1.4e-14 Score=115.84 Aligned_cols=106 Identities=14% Similarity=0.180 Sum_probs=88.1
Q ss_pred hhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
...++++|||+|||+|..+..+++. + ..+|+++|++ .+++.|+++++.+++.++++++++|+.+... .+
T Consensus 60 ~~~~~~~VLDlGcGtG~ls~~la~~-g-~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--------~~ 128 (376)
T 3r0q_C 60 HHFEGKTVLDVGTGSGILAIWSAQA-G-ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISL--------PE 128 (376)
T ss_dssp TTTTTCEEEEESCTTTHHHHHHHHT-T-CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCC--------SS
T ss_pred ccCCCCEEEEeccCcCHHHHHHHhc-C-CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCc--------CC
Confidence 3456789999999999999999986 2 3599999999 9999999999999998889999999976521 36
Q ss_pred ceeEEEEcCC------CcccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 96 TFDFVFVDAD------KDNYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 96 ~~D~v~~d~~------~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
+||+|+++.. ......++..+.++|+|||+++++...
T Consensus 129 ~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~ 171 (376)
T 3r0q_C 129 KVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHAR 171 (376)
T ss_dssp CEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEE
T ss_pred cceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCe
Confidence 8999999652 134566888888999999999876553
No 149
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.57 E-value=2.7e-14 Score=113.14 Aligned_cols=105 Identities=15% Similarity=0.176 Sum_probs=87.5
Q ss_pred hhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
...++++|||+|||+|..+..+++. + ..+|+++|++ ++++.|+++++..++.++++++++|+.+.. +. .+
T Consensus 63 ~~~~~~~VLDvGcG~G~~~~~la~~-g-~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~-----~~ 132 (349)
T 3q7e_A 63 HLFKDKVVLDVGSGTGILCMFAAKA-G-ARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVE--LP-----VE 132 (349)
T ss_dssp HHHTTCEEEEESCTTSHHHHHHHHT-T-CSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCC--CS-----SS
T ss_pred ccCCCCEEEEEeccchHHHHHHHHC-C-CCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHcc--CC-----CC
Confidence 4567899999999999999999986 3 5799999999 599999999999999888999999997651 10 47
Q ss_pred ceeEEEEcCC------CcccHHHHHHHHhcccCCeEEEEeC
Q 029836 96 TFDFVFVDAD------KDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 96 ~~D~v~~d~~------~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
+||+|++... ......++..+.++|||||+++.+.
T Consensus 133 ~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 173 (349)
T 3q7e_A 133 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDR 173 (349)
T ss_dssp CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESCE
T ss_pred ceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEcccc
Confidence 8999998642 3456778888899999999998543
No 150
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.57 E-value=1.1e-14 Score=107.22 Aligned_cols=109 Identities=17% Similarity=0.198 Sum_probs=86.9
Q ss_pred HHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHh
Q 029836 9 QFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (187)
Q Consensus 9 ~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~ 88 (187)
.++..+....++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++ .+. .+++++++|+.+..+
T Consensus 36 ~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~~~--- 104 (218)
T 3ou2_A 36 AALERLRAGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDWTP--- 104 (218)
T ss_dssp HHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSCCC---
T ss_pred HHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccCCC---
Confidence 34444444556689999999999999999987 4799999999999999887 343 689999999976621
Q ss_pred hcccCCCceeEEEEcCCC---cc--cHHHHHHHHhcccCCeEEEEeCcCC
Q 029836 89 QDEKYHGTFDFVFVDADK---DN--YVNYHKRLIELVKVGGVIGYDNTLW 133 (187)
Q Consensus 89 ~~~~~~~~~D~v~~d~~~---~~--~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
.++||+|++.... .+ ...+++.+.+.|+|||.+++.+...
T Consensus 105 -----~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 105 -----DRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp -----SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred -----CCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 6799999987652 11 3778999999999999999876543
No 151
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.57 E-value=1.3e-14 Score=106.33 Aligned_cols=118 Identities=14% Similarity=0.184 Sum_probs=91.6
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 83 (187)
.....+++..+....++.+|||+|||+|..+..++... +.+++++|+++.+++.+++++...+ .++++.++|+.+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~ 83 (209)
T 2p8j_A 8 QPQLYRFLKYCNESNLDKTVLDCGAGGDLPPLSIFVED--GYKTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRKL 83 (209)
T ss_dssp CTHHHHHHHHHHHSSSCSEEEEESCCSSSCTHHHHHHT--TCEEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTSC
T ss_pred hhhHHHHHHHHhccCCCCEEEEECCCCCHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhhC
Confidence 34455677776666778899999999999865555442 5799999999999999999988766 4788999998653
Q ss_pred HHHHhhcccCCCceeEEEEcCC---C--cccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 84 LDQLIQDEKYHGTFDFVFVDAD---K--DNYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 84 l~~~~~~~~~~~~~D~v~~d~~---~--~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
+ . ..++||+|++... . .+...+++.+.+.|+|||++++....
T Consensus 84 -~-~-----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 84 -P-F-----KDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp -C-S-----CTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred -C-C-----CCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 1 1 0468999998654 1 45677889999999999999987654
No 152
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.56 E-value=6e-15 Score=112.19 Aligned_cols=105 Identities=15% Similarity=0.194 Sum_probs=82.1
Q ss_pred HHHHHHHhhc-CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHH
Q 029836 9 QFFSMLLKLI-NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQL 87 (187)
Q Consensus 9 ~~l~~l~~~~-~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~ 87 (187)
+++..|.... ...+|||||||+|..+..++.. ..+|+++|+++.+++.|++ .++++++++++++. + +
T Consensus 28 ~l~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~---~~~v~gvD~s~~ml~~a~~-------~~~v~~~~~~~e~~-~-~ 95 (257)
T 4hg2_A 28 ALFRWLGEVAPARGDALDCGCGSGQASLGLAEF---FERVHAVDPGEAQIRQALR-------HPRVTYAVAPAEDT-G-L 95 (257)
T ss_dssp HHHHHHHHHSSCSSEEEEESCTTTTTHHHHHTT---CSEEEEEESCHHHHHTCCC-------CTTEEEEECCTTCC-C-C
T ss_pred HHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHh---CCEEEEEeCcHHhhhhhhh-------cCCceeehhhhhhh-c-c
Confidence 3555555544 3469999999999999999875 4689999999999887653 26899999999764 1 1
Q ss_pred hhcccCCCceeEEEEcCC--CcccHHHHHHHHhcccCCeEEEEeC
Q 029836 88 IQDEKYHGTFDFVFVDAD--KDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 88 ~~~~~~~~~~D~v~~d~~--~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.+++||+|++... .-+...++.++.++|||||+|++-.
T Consensus 96 -----~~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 96 -----PPASVDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp -----CSSCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----cCCcccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEEE
Confidence 1679999998654 3456789999999999999998754
No 153
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.56 E-value=2.7e-14 Score=106.46 Aligned_cols=111 Identities=20% Similarity=0.252 Sum_probs=87.1
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 83 (187)
.+.....+..++...++.+|||+|||+|..+..+++.. .+++++|+++.+++.+++++...+ +++++++|..+.
T Consensus 55 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~ 128 (231)
T 1vbf_A 55 ALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLG 128 (231)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGC
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCcccc
Confidence 34444455555555677899999999999999999873 799999999999999999987765 899999999763
Q ss_pred HHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 84 LDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 84 l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
++. .++||+|+++....... +.+.+.|+|||.+++..
T Consensus 129 ~~~-------~~~fD~v~~~~~~~~~~---~~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 129 YEE-------EKPYDRVVVWATAPTLL---CKPYEQLKEGGIMILPI 165 (231)
T ss_dssp CGG-------GCCEEEEEESSBBSSCC---HHHHHTEEEEEEEEEEE
T ss_pred ccc-------CCCccEEEECCcHHHHH---HHHHHHcCCCcEEEEEE
Confidence 331 46899999987644332 46788999999998863
No 154
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.56 E-value=1.7e-14 Score=105.31 Aligned_cols=113 Identities=14% Similarity=0.082 Sum_probs=88.8
Q ss_pred HHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhh
Q 029836 10 FFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQ 89 (187)
Q Consensus 10 ~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~ 89 (187)
++..++...++.+|||+|||+|..+..+++. +.+++++|+++.+++.++++++..+. ++++.++|..+.. +.
T Consensus 20 ~l~~~~~~~~~~~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~--~~- 91 (202)
T 2kw5_A 20 FLVSVANQIPQGKILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFD--IV- 91 (202)
T ss_dssp SHHHHHHHSCSSEEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBS--CC-
T ss_pred HHHHHHHhCCCCCEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcC--CC-
Confidence 3444555444449999999999999998875 46999999999999999999988765 7999999886541 10
Q ss_pred cccCCCceeEEEEcCCC---cccHHHHHHHHhcccCCeEEEEeCcCCC
Q 029836 90 DEKYHGTFDFVFVDADK---DNYVNYHKRLIELVKVGGVIGYDNTLWG 134 (187)
Q Consensus 90 ~~~~~~~~D~v~~d~~~---~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
.++||+|++.... .....+++.+.++|+|||.+++......
T Consensus 92 ----~~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 92 ----ADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPE 135 (202)
T ss_dssp ----TTTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTT
T ss_pred ----cCCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccc
Confidence 4689999985432 3457789999999999999999765443
No 155
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.56 E-value=3.6e-14 Score=106.15 Aligned_cols=106 Identities=14% Similarity=0.104 Sum_probs=79.5
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCc
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGT 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~ 96 (187)
..++.+|||+|||+|..+..+++..++.++|+++|+++.+++...+..++. .++.++++|+....... . ..++
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~~-~---~~~~ 146 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSYK-S---VVEN 146 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGTT-T---TCCC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhhh-c---cccc
Confidence 345689999999999999999987766789999999999876554444432 58999999986532100 0 0468
Q ss_pred eeEEEEcCCCcccHHHH-HHHHhcccCCeEEEEe
Q 029836 97 FDFVFVDADKDNYVNYH-KRLIELVKVGGVIGYD 129 (187)
Q Consensus 97 ~D~v~~d~~~~~~~~~~-~~~~~~L~~gG~lv~~ 129 (187)
||+|++|.........+ ..+.+.|||||.+++.
T Consensus 147 ~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 147 VDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp EEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEecCCChhHHHHHHHHHHHhCCCCeEEEEE
Confidence 99999998755555544 4555699999999975
No 156
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.56 E-value=2.7e-15 Score=114.38 Aligned_cols=97 Identities=9% Similarity=-0.000 Sum_probs=80.5
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHc--CC-CCceEEEeCCchHHHHHHhhcccCC
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA--GV-AHKIDFREGPALPLLDQLIQDEKYH 94 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~--~~-~~~i~~~~~d~~~~l~~~~~~~~~~ 94 (187)
.++++|||||||+|..+.++++. + .+++++|+++.+++.|++++... +. .++++++.+|+.+++
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---------- 137 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D--THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---------- 137 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC----------
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH----------
Confidence 46789999999999999999887 4 79999999999999999877431 11 368999999997653
Q ss_pred CceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEe
Q 029836 95 GTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 95 ~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
++||+|++|... ...+++.+.+.|+|||++++.
T Consensus 138 ~~fD~Ii~d~~d--p~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 138 KKYDLIFCLQEP--DIHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp CCEEEEEESSCC--CHHHHHHHHTTEEEEEEEEEE
T ss_pred hhCCEEEECCCC--hHHHHHHHHHhcCCCcEEEEE
Confidence 379999999642 345899999999999999984
No 157
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.55 E-value=3.5e-14 Score=106.37 Aligned_cols=110 Identities=17% Similarity=0.144 Sum_probs=88.4
Q ss_pred HHHHHHHHHhhc--CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHH
Q 029836 7 EAQFFSMLLKLI--NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL 84 (187)
Q Consensus 7 ~~~~l~~l~~~~--~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l 84 (187)
..+++..++... ++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++...+. +++++++|..+..
T Consensus 23 ~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~ 97 (246)
T 1y8c_A 23 WSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLN 97 (246)
T ss_dssp HHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCC
T ss_pred HHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCC
Confidence 344455555443 6789999999999999999876 46899999999999999999988765 7899999987542
Q ss_pred HHHhhcccCCCceeEEEEcC-C---C---cccHHHHHHHHhcccCCeEEEEe
Q 029836 85 DQLIQDEKYHGTFDFVFVDA-D---K---DNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~v~~d~-~---~---~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
. .++||+|++.. . . .+...+++.+.++|+|||+++++
T Consensus 98 ~--------~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 98 I--------NRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp C--------SCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred c--------cCCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 1 36899999876 3 1 45677899999999999999984
No 158
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.55 E-value=9.7e-14 Score=110.90 Aligned_cols=106 Identities=21% Similarity=0.277 Sum_probs=90.4
Q ss_pred hhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHc---------------CCCCceEEEeCCc
Q 029836 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA---------------GVAHKIDFREGPA 80 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~---------------~~~~~i~~~~~d~ 80 (187)
...++.+|||+|||+|..++.+++..+ ..+|+++|+++.+++.+++|++.+ ++. +++++++|+
T Consensus 44 ~~~~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-~i~v~~~Da 121 (378)
T 2dul_A 44 NILNPKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK-TIVINHDDA 121 (378)
T ss_dssp HHHCCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-EEEEEESCH
T ss_pred HHcCCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC-ceEEEcCcH
Confidence 334788999999999999999998865 578999999999999999999998 773 499999999
Q ss_pred hHHHHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 81 LPLLDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 81 ~~~l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.+++... .++||+|++|+. .....+++.+.+.|++||++++..
T Consensus 122 ~~~~~~~------~~~fD~I~lDP~-~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 122 NRLMAER------HRYFHFIDLDPF-GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHHHS------TTCEEEEEECCS-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHhc------cCCCCEEEeCCC-CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 8877654 457999999874 344788999999999999988753
No 159
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.54 E-value=3.5e-14 Score=113.69 Aligned_cols=105 Identities=16% Similarity=0.119 Sum_probs=90.1
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCc-eEEEeCCchHHHH-HHhhcccCCCc
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHK-IDFREGPALPLLD-QLIQDEKYHGT 96 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~-i~~~~~d~~~~l~-~~~~~~~~~~~ 96 (187)
++.+|||++||+|..++.++...+...+|+++|+++.+++.+++|++.+++.++ ++++++|+.+++. .. .++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~------~~~ 125 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEW------GFG 125 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCC------SSC
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhh------CCC
Confidence 467999999999999999998754236899999999999999999999999766 9999999988876 54 468
Q ss_pred eeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 97 FDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 97 ~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
||+|++|+ ......+++.+.++|++||+|++.-
T Consensus 126 fD~V~lDP-~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 126 FDYVDLDP-FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEEEECC-SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcEEEECC-CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 99999998 3444678999999999999888754
No 160
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.54 E-value=2.1e-14 Score=107.02 Aligned_cols=103 Identities=16% Similarity=0.204 Sum_probs=82.1
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCC-----CCEEEEEeCCchHHHHHHHHHHHcCC----CCceEEEeCCchHHHHHH
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPD-----DGKILALDITKEHYEKGLPIIQKAGV----AHKIDFREGPALPLLDQL 87 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~-----~~~v~~vd~~~~~~~~a~~~~~~~~~----~~~i~~~~~d~~~~l~~~ 87 (187)
..+..+|||||||+|..+..+++..+. .++|+++|+++.+++.+++++...+. ..+++++++|..+.++.
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~- 160 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP- 160 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG-
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc-
Confidence 445679999999999999999986541 25999999999999999999987651 25899999998764331
Q ss_pred hhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEe
Q 029836 88 IQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 88 ~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
.++||+|+++...... .+.+.+.|+|||.+++.
T Consensus 161 ------~~~fD~I~~~~~~~~~---~~~~~~~LkpgG~lvi~ 193 (227)
T 1r18_A 161 ------NAPYNAIHVGAAAPDT---PTELINQLASGGRLIVP 193 (227)
T ss_dssp ------GCSEEEEEECSCBSSC---CHHHHHTEEEEEEEEEE
T ss_pred ------CCCccEEEECCchHHH---HHHHHHHhcCCCEEEEE
Confidence 2689999998764433 36778899999999874
No 161
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.54 E-value=6e-14 Score=110.79 Aligned_cols=103 Identities=17% Similarity=0.168 Sum_probs=85.0
Q ss_pred hhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
...++++|||||||+|..+..+++. + ..+|+++|+++ +++.|+++++.+++.++++++++|+.+.. + ..+
T Consensus 61 ~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~-----~~~ 130 (340)
T 2fyt_A 61 HIFKDKVVLDVGCGTGILSMFAAKA-G-AKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVH--L-----PVE 130 (340)
T ss_dssp GGTTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC--C-----SCS
T ss_pred hhcCCCEEEEeeccCcHHHHHHHHc-C-CCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhc--C-----CCC
Confidence 3467789999999999999999886 3 46999999996 99999999999998889999999997641 1 046
Q ss_pred ceeEEEEcCC------CcccHHHHHHHHhcccCCeEEEE
Q 029836 96 TFDFVFVDAD------KDNYVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 96 ~~D~v~~d~~------~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
+||+|++... ......++..+.++|+|||.++.
T Consensus 131 ~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 131 KVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp CEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred cEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEc
Confidence 8999998752 23356688888999999999983
No 162
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.54 E-value=6e-14 Score=111.12 Aligned_cols=102 Identities=14% Similarity=0.156 Sum_probs=85.2
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCc
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGT 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~ 96 (187)
..++++|||||||+|..+..+++. + ..+|+++|+++ +++.|+++++.+++.++++++++|..+.. + .++
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~--~------~~~ 116 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS--L------PEQ 116 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC--C------SSC
T ss_pred cCCcCEEEEcCCCccHHHHHHHhC-C-CCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCC--C------CCc
Confidence 357789999999999999998875 3 47999999996 88999999999998889999999987641 1 468
Q ss_pred eeEEEEcCC-----CcccHHHHHHHHhcccCCeEEEEe
Q 029836 97 FDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 97 ~D~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
||+|++... .+.....+..+.++|+|||.+++.
T Consensus 117 ~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 117 VDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred eeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 999998754 345677888889999999999853
No 163
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.54 E-value=1.1e-13 Score=108.69 Aligned_cols=107 Identities=17% Similarity=0.167 Sum_probs=86.9
Q ss_pred HHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhccc
Q 029836 13 MLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEK 92 (187)
Q Consensus 13 ~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~ 92 (187)
......++++|||+|||+|..+..+++. + ..+|+++|++ .+++.|+++++.+++.++++++++|+.+.. +.
T Consensus 32 ~~~~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~---- 102 (328)
T 1g6q_1 32 QNKDLFKDKIVLDVGCGTGILSMFAAKH-G-AKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVH--LP---- 102 (328)
T ss_dssp HHHHHHTTCEEEEETCTTSHHHHHHHHT-C-CSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSC--CS----
T ss_pred hhHhhcCCCEEEEecCccHHHHHHHHHC-C-CCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhcc--CC----
Confidence 3345668899999999999999998876 3 4699999999 589999999999999889999999987641 10
Q ss_pred CCCceeEEEEcCC------CcccHHHHHHHHhcccCCeEEEEe
Q 029836 93 YHGTFDFVFVDAD------KDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 93 ~~~~~D~v~~d~~------~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
.++||+|++... ......++..+.++|+|||.++.+
T Consensus 103 -~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 103 -FPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp -SSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred -CCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 368999998742 233567888888999999999843
No 164
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.53 E-value=7.2e-15 Score=111.43 Aligned_cols=104 Identities=13% Similarity=0.160 Sum_probs=85.7
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..+..+++.+ +.+++++|+++.+++.++++.... ++++++++|..+. + + ..++|
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~-~-~-----~~~~f 121 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTK-E-F-----PENNF 121 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTC-C-C-----CTTCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccC-C-C-----CCCcE
Confidence 356799999999999999999875 479999999999999998877554 6899999998764 1 1 15789
Q ss_pred eEEEEcCC---C--cccHHHHHHHHhcccCCeEEEEeCcCC
Q 029836 98 DFVFVDAD---K--DNYVNYHKRLIELVKVGGVIGYDNTLW 133 (187)
Q Consensus 98 D~v~~d~~---~--~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
|+|++... . .+...+++.+.++|+|||.+++.+...
T Consensus 122 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 122 DLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCA 162 (266)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 99998765 2 556788999999999999999987643
No 165
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.53 E-value=2.1e-14 Score=107.71 Aligned_cols=98 Identities=13% Similarity=0.088 Sum_probs=80.4
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.++.+|||||||+|..+..+++. +.+++++|+++.+++.++++ ++++.+|..+.+..+. +++|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~~-----~~~f 102 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSLP-----DKYL 102 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTSC-----TTCB
T ss_pred cCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhcC-----CCCe
Confidence 35689999999999999999886 46799999999999888763 7889999987654432 5789
Q ss_pred eEEEEcCC-----CcccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 98 DFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 98 D~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
|+|++... ......+++.+.+.|||||++++....
T Consensus 103 D~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 103 DGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp SEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred eEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 99998764 224578999999999999999986554
No 166
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.53 E-value=4.2e-14 Score=104.51 Aligned_cols=108 Identities=17% Similarity=0.186 Sum_probs=85.0
Q ss_pred HHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHh
Q 029836 9 QFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (187)
Q Consensus 9 ~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~ 88 (187)
.++..+. ..++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++. .+++++++|+.+...
T Consensus 36 ~~l~~~~-~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~--- 103 (220)
T 3hnr_A 36 DILEDVV-NKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEV--- 103 (220)
T ss_dssp HHHHHHH-HTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCC---
T ss_pred HHHHHhh-ccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCC---
Confidence 4444443 347789999999999999999976 5799999999999999988764 478999999875421
Q ss_pred hcccCCCceeEEEEcCCC---ccc--HHHHHHHHhcccCCeEEEEeCcCC
Q 029836 89 QDEKYHGTFDFVFVDADK---DNY--VNYHKRLIELVKVGGVIGYDNTLW 133 (187)
Q Consensus 89 ~~~~~~~~~D~v~~d~~~---~~~--~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
.++||+|++.... .+. ..+++.+.+.|+|||.+++.+..+
T Consensus 104 -----~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 148 (220)
T 3hnr_A 104 -----PTSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIF 148 (220)
T ss_dssp -----CSCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECB
T ss_pred -----CCCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 3689999988652 222 238999999999999999976544
No 167
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.53 E-value=2.8e-14 Score=107.75 Aligned_cols=98 Identities=12% Similarity=0.223 Sum_probs=82.1
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCcee
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D 98 (187)
++.+|||+|||+|..+..+++..+ .+++++|+++.+++.++++.. ..+++++++|+.+. + . ..++||
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~-~-~-----~~~~fD 110 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGA--KKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDI-A-I-----EPDAYN 110 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGC-C-C-----CTTCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhC-C-C-----CCCCeE
Confidence 578999999999999999998732 499999999999999988765 36899999998653 2 1 147899
Q ss_pred EEEEcCC---CcccHHHHHHHHhcccCCeEEEEe
Q 029836 99 FVFVDAD---KDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 99 ~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+|++... ..+...+++.+.++|+|||.+++.
T Consensus 111 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 111 VVLSSLALHYIASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence 9998765 356788999999999999999986
No 168
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.53 E-value=1.2e-14 Score=109.79 Aligned_cols=120 Identities=14% Similarity=0.140 Sum_probs=87.6
Q ss_pred HHHHHHHhhc---CCCEEEEEcccccHHHHHHHhh--CCCCCEEEEEeCCchHHHHHHHHHHHc---CCCCc--------
Q 029836 9 QFFSMLLKLI---NAKNTMEIGVFTGYSLLATALA--IPDDGKILALDITKEHYEKGLPIIQKA---GVAHK-------- 72 (187)
Q Consensus 9 ~~l~~l~~~~---~~~~vLeiG~g~G~~~~~l~~~--~~~~~~v~~vd~~~~~~~~a~~~~~~~---~~~~~-------- 72 (187)
+++..++... ++.+|||+|||+|..+..++.. .+ ..+|+++|+++.+++.|++++... ++..+
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~-~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~ 116 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRS-LRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQS 116 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGG-EEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccC-CCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhh
Confidence 4555555432 4569999999999999999987 33 578999999999999999988765 44222
Q ss_pred -----------------eE-------------EEeCCchHHHHHHhhcccCCCceeEEEEcCC---C---------cccH
Q 029836 73 -----------------ID-------------FREGPALPLLDQLIQDEKYHGTFDFVFVDAD---K---------DNYV 110 (187)
Q Consensus 73 -----------------i~-------------~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~---~---------~~~~ 110 (187)
++ +.++|..+..+..... ..++||+|+++.+ . ..+.
T Consensus 117 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~ 194 (250)
T 1o9g_A 117 ERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVL--AGSAPDVVLTDLPYGERTHWEGQVPGQPVA 194 (250)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHH--TTCCCSEEEEECCGGGSSSSSSCCCHHHHH
T ss_pred hhcccccchhhhhhhhhhhhhccccccccccceeeccccccccccccc--CCCCceEEEeCCCeeccccccccccccHHH
Confidence 66 9999987654210000 0348999999864 1 1235
Q ss_pred HHHHHHHhcccCCeEEEEeCc
Q 029836 111 NYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 111 ~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.+++.+.++|+|||++++.+.
T Consensus 195 ~~l~~~~~~LkpgG~l~~~~~ 215 (250)
T 1o9g_A 195 GLLRSLASALPAHAVIAVTDR 215 (250)
T ss_dssp HHHHHHHHHSCTTCEEEEEES
T ss_pred HHHHHHHHhcCCCcEEEEeCc
Confidence 788999999999999998433
No 169
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.53 E-value=6.5e-14 Score=111.47 Aligned_cols=108 Identities=15% Similarity=0.135 Sum_probs=89.9
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHH-HHHhhcccCCCc
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL-DQLIQDEKYHGT 96 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l-~~~~~~~~~~~~ 96 (187)
.++.+|||||||+|..+..+++..| +.+++++|+ +.+++.|+++++..++.++++++.+|..+.. + + .++
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~------p~~ 248 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNK-EVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVP-F------PTG 248 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHST-TCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCC-C------CCC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCC-C------CCC
Confidence 4678999999999999999999887 689999999 9999999999998888789999999987531 1 1 357
Q ss_pred eeEEEEcCC-----CcccHHHHHHHHhcccCCeEEEEeCcCCC
Q 029836 97 FDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNTLWG 134 (187)
Q Consensus 97 ~D~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
||+|++... .+....+++++.+.|+|||.+++.+..+.
T Consensus 249 ~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 249 FDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWD 291 (363)
T ss_dssp CSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTT
T ss_pred cCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccC
Confidence 999998654 22345789999999999999998776654
No 170
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.53 E-value=8.1e-14 Score=103.29 Aligned_cols=111 Identities=16% Similarity=0.144 Sum_probs=87.3
Q ss_pred HHHHHHhh-cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHh
Q 029836 10 FFSMLLKL-INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (187)
Q Consensus 10 ~l~~l~~~-~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~ 88 (187)
++..+... .++.+|||+|||+|..+..+++.. .+++++|+++.+++.++++++..+ .+++++++|..+.. ..
T Consensus 28 ~~~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~--~~ 100 (227)
T 1ve3_A 28 LEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYG---FEVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLS--FE 100 (227)
T ss_dssp HHHHHHHSCCSCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCC--SC
T ss_pred HHHHHHHhcCCCCeEEEEeccCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCC--CC
Confidence 34444433 346799999999999999998763 399999999999999999998876 58999999986531 10
Q ss_pred hcccCCCceeEEEEcCC--C---cccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 89 QDEKYHGTFDFVFVDAD--K---DNYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 89 ~~~~~~~~~D~v~~d~~--~---~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
.++||+|++... . .+...+++.+.++|+|||.+++.+..
T Consensus 101 -----~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 101 -----DKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp -----TTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -----CCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 468999998765 2 23467889999999999999887554
No 171
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.53 E-value=1.3e-14 Score=109.79 Aligned_cols=98 Identities=12% Similarity=0.188 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHhhc-----CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCC
Q 029836 5 PDEAQFFSMLLKLI-----NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGP 79 (187)
Q Consensus 5 ~~~~~~l~~l~~~~-----~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d 79 (187)
++...++..++... ++.+|||+|||+|..+..++...+ +.+++++|+++.+++.|+++++.+++.++++++++|
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 124 (254)
T 2h00_A 46 LNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLN-GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVP 124 (254)
T ss_dssp HHHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC
T ss_pred HHHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcc
Confidence 56667777776543 456999999999999999987754 589999999999999999999999987789999999
Q ss_pred chH-HHHHHhhcccCCCceeEEEEcCC
Q 029836 80 ALP-LLDQLIQDEKYHGTFDFVFVDAD 105 (187)
Q Consensus 80 ~~~-~l~~~~~~~~~~~~~D~v~~d~~ 105 (187)
+.+ ++..+... .+++||+|+++++
T Consensus 125 ~~~~~~~~~~~~--~~~~fD~i~~npp 149 (254)
T 2h00_A 125 QKTLLMDALKEE--SEIIYDFCMCNPP 149 (254)
T ss_dssp TTCSSTTTSTTC--CSCCBSEEEECCC
T ss_pred hhhhhhhhhhcc--cCCcccEEEECCC
Confidence 765 22222100 0158999999864
No 172
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.53 E-value=8.3e-14 Score=105.46 Aligned_cols=100 Identities=22% Similarity=0.169 Sum_probs=82.5
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++ . +..+++++.++|+.+. + +. +++|
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-~-~~~~~~~~~~~d~~~~-~-~~-----~~~f 105 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKI-A-GVDRKVQVVQADARAI-P-LP-----DESV 105 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHT-T-TSCTTEEEEESCTTSC-C-SC-----TTCE
T ss_pred CCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh-h-ccCCceEEEEcccccC-C-CC-----CCCe
Confidence 45789999999999999999875 479999999999999999987 2 3336899999998653 2 11 4689
Q ss_pred eEEEEcCC---CcccHHHHHHHHhcccCCeEEEEe
Q 029836 98 DFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 98 D~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
|+|++... ..+...+++.+.++|+|||++++.
T Consensus 106 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 106 HGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 99998764 235678999999999999999986
No 173
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.52 E-value=5.3e-14 Score=106.87 Aligned_cols=105 Identities=13% Similarity=0.067 Sum_probs=82.8
Q ss_pred HHHHHHhhc-CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHh
Q 029836 10 FFSMLLKLI-NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (187)
Q Consensus 10 ~l~~l~~~~-~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~ 88 (187)
++..+.... ++.+|||+|||+|..+..+++. ..+++++|+++.+++.|++++ .+++++++|+.+...
T Consensus 40 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~--- 107 (263)
T 3pfg_A 40 LAALVRRHSPKAASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRN------PDAVLHHGDMRDFSL--- 107 (263)
T ss_dssp HHHHHHHHCTTCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTTCCC---
T ss_pred HHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhC------CCCEEEECChHHCCc---
Confidence 333343333 4589999999999999998876 468999999999999998875 378999999876421
Q ss_pred hcccCCCceeEEEEcC-C---C---cccHHHHHHHHhcccCCeEEEEeCc
Q 029836 89 QDEKYHGTFDFVFVDA-D---K---DNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 89 ~~~~~~~~~D~v~~d~-~---~---~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.++||+|++.. . . ++...+++.+.++|+|||+++++..
T Consensus 108 -----~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 108 -----GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp -----SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred -----cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 46899999875 3 1 3456789999999999999999754
No 174
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.52 E-value=1.3e-13 Score=101.94 Aligned_cols=105 Identities=10% Similarity=0.131 Sum_probs=82.8
Q ss_pred HhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCC
Q 029836 15 LKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYH 94 (187)
Q Consensus 15 ~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~ 94 (187)
+...++.+|||+|||+|..+..+++. +.+++++|+++.+++.++++ .++.+..++..+....... ..
T Consensus 48 ~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~---~~ 114 (227)
T 3e8s_A 48 ILGRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKVP---VG 114 (227)
T ss_dssp HHHTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCSC---CC
T ss_pred hhcCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh-------cccccchhhHHhhcccccc---cC
Confidence 34456799999999999999999876 56999999999999998876 3677888888665221110 13
Q ss_pred CceeEEEEcCC--CcccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 95 GTFDFVFVDAD--KDNYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 95 ~~~D~v~~d~~--~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
.+||+|++... ..+...+++.+.++|+|||++++....
T Consensus 115 ~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 154 (227)
T 3e8s_A 115 KDYDLICANFALLHQDIIELLSAMRTLLVPGGALVIQTLH 154 (227)
T ss_dssp CCEEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCccEEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEecC
Confidence 46999998754 556789999999999999999997653
No 175
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.52 E-value=1.1e-13 Score=109.18 Aligned_cols=100 Identities=20% Similarity=0.100 Sum_probs=86.1
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..++. ++ + ..+|+++|+++.+++.+++|++.+++.++++++++|+.+++ ++|
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~-~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~----------~~f 259 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--N-AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD----------VKG 259 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--T-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC----------CCE
T ss_pred CCCCEEEEccCccCHHHHh-cc--C-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc----------CCC
Confidence 4778999999999999999 76 3 68999999999999999999999998778999999998664 379
Q ss_pred eEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 98 DFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 98 D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
|+|++|++. ....+++.+.++|+|||++++....
T Consensus 260 D~Vi~dpP~-~~~~~l~~~~~~L~~gG~l~~~~~~ 293 (336)
T 2yx1_A 260 NRVIMNLPK-FAHKFIDKALDIVEEGGVIHYYTIG 293 (336)
T ss_dssp EEEEECCTT-TGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred cEEEECCcH-hHHHHHHHHHHHcCCCCEEEEEEee
Confidence 999998753 2347888899999999999886544
No 176
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.52 E-value=9.5e-14 Score=106.97 Aligned_cols=106 Identities=15% Similarity=0.146 Sum_probs=86.7
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..+..+++. + ..+++++|+++.+++.|++++...+...+++++++|..+..-.. .++|
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------~~~f 134 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-G-IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDL------GKEF 134 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-T-CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCC------SSCE
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCC------CCCc
Confidence 56789999999999999988875 3 46999999999999999999998887778999999987541000 5689
Q ss_pred eEEEEcCCC-------cccHHHHHHHHhcccCCeEEEEeCc
Q 029836 98 DFVFVDADK-------DNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 98 D~v~~d~~~-------~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
|+|++.... .+...+++.+.++|+|||.+++...
T Consensus 135 D~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 135 DVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp EEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 999987542 3346788999999999999998643
No 177
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.52 E-value=7.7e-14 Score=111.15 Aligned_cols=104 Identities=14% Similarity=0.236 Sum_probs=84.5
Q ss_pred hhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
...+.++|||||||+|..+.+.+++. ..+|++||.++ +++.|+++++.+++.++++++++++.++- + .+
T Consensus 80 ~~~~~k~VLDvG~GtGiLs~~Aa~aG--A~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~--l------pe 148 (376)
T 4hc4_A 80 AALRGKTVLDVGAGTGILSIFCAQAG--ARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVE--L------PE 148 (376)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHTT--CSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCC--C------SS
T ss_pred HhcCCCEEEEeCCCccHHHHHHHHhC--CCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeec--C------Cc
Confidence 34678999999999999998888763 46899999986 88999999999999999999999997652 1 56
Q ss_pred ceeEEEEcCC-----Cc-ccHHHHHHHHhcccCCeEEEEeC
Q 029836 96 TFDFVFVDAD-----KD-NYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 96 ~~D~v~~d~~-----~~-~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
++|+|+.... .+ ....++....++|+|||.++.+.
T Consensus 149 ~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~~ 189 (376)
T 4hc4_A 149 QVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPAS 189 (376)
T ss_dssp CEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESCE
T ss_pred cccEEEeecccccccccchhhhHHHHHHhhCCCCceECCcc
Confidence 8999997532 23 45667777779999999998543
No 178
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.52 E-value=2.9e-14 Score=107.79 Aligned_cols=98 Identities=15% Similarity=0.155 Sum_probs=83.0
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..+..+++.++ ..+++++|+++.+++.++++ .+++++.++|+.+.. . .++|
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~------~~~~~~~~~d~~~~~--~------~~~f 96 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYG-VNVITGIDSDDDMLEKAADR------LPNTNFGKADLATWK--P------AQKA 96 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHC-TTSEEEEESCHHHHHHHHHH------STTSEEEECCTTTCC--C------SSCE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh------CCCcEEEECChhhcC--c------cCCc
Confidence 4567999999999999999998875 67899999999999999887 257899999987643 1 5789
Q ss_pred eEEEEcCC---CcccHHHHHHHHhcccCCeEEEEeC
Q 029836 98 DFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 98 D~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
|+|++... ..+...+++.+.+.|+|||.+++..
T Consensus 97 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 97 DLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp EEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 99998765 3466889999999999999999864
No 179
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.52 E-value=9.1e-14 Score=109.97 Aligned_cols=108 Identities=16% Similarity=0.118 Sum_probs=90.6
Q ss_pred CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeE
Q 029836 20 AKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDF 99 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~ 99 (187)
+.+|||||||+|..+..+++.+| ..+++++|+ +.+++.+++++...+..++++++.+|..+..+.. .++||+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------~~~~D~ 251 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHP-QLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFE------GGAADV 251 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGT------TCCEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCC-CCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccC------CCCccE
Confidence 78999999999999999999887 689999999 8899999999999888788999999987653111 457999
Q ss_pred EEEcCC-----CcccHHHHHHHHhcccCCeEEEEeCcCCCc
Q 029836 100 VFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNTLWGG 135 (187)
Q Consensus 100 v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~ 135 (187)
|++... .+....+++.+.+.|+|||.+++.+..+..
T Consensus 252 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (352)
T 3mcz_A 252 VMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMND 292 (352)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCT
T ss_pred EEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 998654 123478899999999999999988766543
No 180
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.51 E-value=1e-13 Score=110.49 Aligned_cols=106 Identities=17% Similarity=0.165 Sum_probs=89.5
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.+..+|||+|||+|..+..+++.+| +.+++++|+ +.+++.+++++...++.+++++..+|..+.+ ..+|
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~---------p~~~ 269 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFP-GLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETI---------PDGA 269 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCC---------CSSC
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCC-CCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCC---------CCCc
Confidence 3568999999999999999999887 689999999 9999999999999988889999999987332 2379
Q ss_pred eEEEEcCCC-----cccHHHHHHHHhcccCCeEEEEeCcCCC
Q 029836 98 DFVFVDADK-----DNYVNYHKRLIELVKVGGVIGYDNTLWG 134 (187)
Q Consensus 98 D~v~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
|+|++...- .....+++.+.+.|+|||.+++.+....
T Consensus 270 D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 270 DVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLID 311 (369)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCC
T ss_pred eEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 999986541 2234789999999999999999876654
No 181
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.51 E-value=1.4e-13 Score=103.09 Aligned_cols=107 Identities=20% Similarity=0.254 Sum_probs=85.3
Q ss_pred HHHHHHHhhc-CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHH
Q 029836 9 QFFSMLLKLI-NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQL 87 (187)
Q Consensus 9 ~~l~~l~~~~-~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~ 87 (187)
.++..+.... +..+|||+|||+|..+..+++. .+++++|+++.+++.+++++...+ .++++.++|..+.. .
T Consensus 22 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~--~ 93 (243)
T 3d2l_A 22 EWVAWVLEQVEPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELE--L 93 (243)
T ss_dssp HHHHHHHHHSCTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCC--C
T ss_pred HHHHHHHHHcCCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcC--C
Confidence 4555555544 4579999999999999988764 689999999999999999998766 47899999986542 1
Q ss_pred hhcccCCCceeEEEEcCC-------CcccHHHHHHHHhcccCCeEEEEe
Q 029836 88 IQDEKYHGTFDFVFVDAD-------KDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 88 ~~~~~~~~~~D~v~~d~~-------~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
.++||+|++... ......+++.+.++|+|||.++++
T Consensus 94 ------~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 94 ------PEPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp ------SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------CCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 468999998642 134567889999999999999984
No 182
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.51 E-value=7.4e-14 Score=109.74 Aligned_cols=106 Identities=18% Similarity=0.097 Sum_probs=89.3
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCcee
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D 98 (187)
++.+|||||||+|..+..+++.+| ..+++++|+ +.+++.+++++...++.+++++..+|..+.+ ..+||
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---------p~~~D 237 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHE-DLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPL---------PAGAG 237 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC---------CCSCS
T ss_pred CCCEEEEeCCChhHHHHHHHHHCC-CCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCC---------CCCCc
Confidence 357999999999999999999887 689999999 9999999999999988889999999986332 23799
Q ss_pred EEEEcCC-----CcccHHHHHHHHhcccCCeEEEEeCcCCCc
Q 029836 99 FVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNTLWGG 135 (187)
Q Consensus 99 ~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~ 135 (187)
+|++... .+....+++++.+.|+|||.+++.+.....
T Consensus 238 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 279 (332)
T 3i53_A 238 GYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGD 279 (332)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-
T ss_pred EEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCC
Confidence 9998654 122477899999999999999998776554
No 183
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.51 E-value=3.5e-14 Score=105.91 Aligned_cols=103 Identities=12% Similarity=0.130 Sum_probs=79.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCC-chHHHHH---HHHHHHcCCCCceEEEeCCchHHHHHHhhcccC
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDIT-KEHYEKG---LPIIQKAGVAHKIDFREGPALPLLDQLIQDEKY 93 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~-~~~~~~a---~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~ 93 (187)
.++.+|||||||+|..+..+++..+ +.+|+++|++ +.+++.| +++....++ +++++.++|+.++ +...
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~-~~v~~~~~d~~~l-~~~~----- 94 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQ-NTFYIGIDPVKENLFDISKKIIKKPSKGGL-SNVVFVIAAAESL-PFEL----- 94 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCT-TEEEEEECSCCGGGHHHHHHHTSCGGGTCC-SSEEEECCBTTBC-CGGG-----
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHcCC-CCeEEEEcCHHHh-hhhc-----
Confidence 4567999999999999999997654 7899999999 5555555 777777776 5899999999765 3211
Q ss_pred CCceeEEEEcCCC--------cccHHHHHHHHhcccCCeEEEE
Q 029836 94 HGTFDFVFVDADK--------DNYVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 94 ~~~~D~v~~d~~~--------~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
.+.+|.|++.... .....++.++.++|||||.+++
T Consensus 95 ~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 95 KNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp TTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred cCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 3578888775431 2346789999999999999988
No 184
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.50 E-value=2.1e-14 Score=111.19 Aligned_cols=104 Identities=11% Similarity=0.071 Sum_probs=84.6
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCC--CceEEEeCCchHHHHHHhhcccCCCc
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVA--HKIDFREGPALPLLDQLIQDEKYHGT 96 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~--~~i~~~~~d~~~~l~~~~~~~~~~~~ 96 (187)
++.+|||||||+|..+..+++. +.+|+++|+++.+++.+++++...+.. .+++++++|+.+... .++
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~--------~~~ 150 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL--------DKR 150 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC--------SCC
T ss_pred CCCcEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc--------CCC
Confidence 3459999999999999999976 468999999999999999999876632 589999999976421 468
Q ss_pred eeEEEEcCC------CcccHHHHHHHHhcccCCeEEEEeCcCC
Q 029836 97 FDFVFVDAD------KDNYVNYHKRLIELVKVGGVIGYDNTLW 133 (187)
Q Consensus 97 ~D~v~~d~~------~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
||+|++... .+....+++.+.++|+|||.+++.....
T Consensus 151 fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 151 FGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp EEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred cCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 999986421 2235789999999999999999976544
No 185
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.50 E-value=3.4e-13 Score=107.60 Aligned_cols=123 Identities=15% Similarity=0.085 Sum_probs=89.1
Q ss_pred CCCHHHHHH-HHHHHhhc--CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeC
Q 029836 2 MTSPDEAQF-FSMLLKLI--NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREG 78 (187)
Q Consensus 2 ~~~~~~~~~-l~~l~~~~--~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~ 78 (187)
|+++...+. +..++... .+.+|||+|||+|..++.+++. ..+|+++|+++.+++.|++|++.+++ ++++++.+
T Consensus 193 Q~n~~~~~~l~~~~~~~~~~~~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~-~~v~~~~~ 268 (369)
T 3bt7_A 193 QPNAAMNIQMLEWALDVTKGSKGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHI-DNVQIIRM 268 (369)
T ss_dssp CSBHHHHHHHHHHHHHHTTTCCSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTC-CSEEEECC
T ss_pred cCCHHHHHHHHHHHHHHhhcCCCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEEC
Confidence 455555443 34444433 3578999999999999998874 46999999999999999999999988 68999999
Q ss_pred CchHHHHHHhhcc---------cCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 79 PALPLLDQLIQDE---------KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 79 d~~~~l~~~~~~~---------~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
|+.+.++.+.... ....+||+|++|++.... .+.+.+.|+++|.+++..+
T Consensus 269 d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g~---~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 269 AAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSGL---DSETEKMVQAYPRILYISC 327 (369)
T ss_dssp CSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTTCC---CHHHHHHHTTSSEEEEEES
T ss_pred CHHHHHHHHhhccccccccccccccCCCCEEEECcCcccc---HHHHHHHHhCCCEEEEEEC
Confidence 9998876552110 000379999999875433 2334455668888876543
No 186
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.50 E-value=5.4e-14 Score=103.42 Aligned_cols=103 Identities=20% Similarity=0.149 Sum_probs=82.0
Q ss_pred HHHHHh-hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhh
Q 029836 11 FSMLLK-LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQ 89 (187)
Q Consensus 11 l~~l~~-~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~ 89 (187)
+..++. ..++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++ ++++..+|..+.. .
T Consensus 34 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~--~-- 99 (211)
T 3e23_A 34 LTKFLGELPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL-------GRPVRTMLFHQLD--A-- 99 (211)
T ss_dssp HHHHHTTSCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCC--C--
T ss_pred HHHHHHhcCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc-------CCceEEeeeccCC--C--
Confidence 344443 345679999999999999999976 469999999999999999877 4567788886543 1
Q ss_pred cccCCCceeEEEEcCCC-----cccHHHHHHHHhcccCCeEEEEeCc
Q 029836 90 DEKYHGTFDFVFVDADK-----DNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 90 ~~~~~~~~D~v~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.++||+|++.... ++...+++.+.+.|+|||++++...
T Consensus 100 ----~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 142 (211)
T 3e23_A 100 ----IDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYK 142 (211)
T ss_dssp ----CSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ----CCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 6799999987652 2556889999999999999998643
No 187
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.50 E-value=6.4e-14 Score=104.89 Aligned_cols=107 Identities=12% Similarity=0.218 Sum_probs=84.6
Q ss_pred HHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhc
Q 029836 11 FSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQD 90 (187)
Q Consensus 11 l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~ 90 (187)
+..++...++.+|||+|||+|..+..+++. + ..+++++|+++.+++.++++... .++++.++|..+.. ..
T Consensus 35 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~--~~-- 104 (243)
T 3bkw_A 35 LRAMLPEVGGLRIVDLGCGFGWFCRWAHEH-G-ASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLH--LP-- 104 (243)
T ss_dssp HHHHSCCCTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCC--CC--
T ss_pred HHHhccccCCCEEEEEcCcCCHHHHHHHHC-C-CCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhcc--CC--
Confidence 444444456789999999999999999876 2 24999999999999999876543 47999999987642 11
Q ss_pred ccCCCceeEEEEcCC---CcccHHHHHHHHhcccCCeEEEEeC
Q 029836 91 EKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 91 ~~~~~~~D~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.++||+|++... ..+...+++.+.++|+|||.+++..
T Consensus 105 ---~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 105 ---QDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp ---TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---CCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 468999998764 3456789999999999999999864
No 188
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.50 E-value=8.1e-14 Score=106.84 Aligned_cols=100 Identities=18% Similarity=0.145 Sum_probs=82.3
Q ss_pred HhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCC
Q 029836 15 LKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYH 94 (187)
Q Consensus 15 ~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~ 94 (187)
+...++.+|||||||+|..+..+++ + +.+++++|+++.+++.+++++ +++++.++|+.+. + . .
T Consensus 53 l~~~~~~~vLDiGcG~G~~~~~l~~--~-~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~-~------~ 115 (279)
T 3ccf_A 53 LNPQPGEFILDLGCGTGQLTEKIAQ--S-GAEVLGTDNAATMIEKARQNY------PHLHFDVADARNF-R-V------D 115 (279)
T ss_dssp HCCCTTCEEEEETCTTSHHHHHHHH--T-TCEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTC-C-C------S
T ss_pred hCCCCCCEEEEecCCCCHHHHHHHh--C-CCeEEEEECCHHHHHHHHhhC------CCCEEEECChhhC-C-c------C
Confidence 3445678999999999999999998 3 689999999999999998765 5788999998753 2 1 4
Q ss_pred CceeEEEEcCC---CcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 95 GTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 95 ~~~D~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
++||+|++... ..+...+++.+.+.|+|||++++...
T Consensus 116 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 116 KPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp SCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEec
Confidence 68999998765 24667899999999999999998643
No 189
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.50 E-value=3.1e-13 Score=109.59 Aligned_cols=113 Identities=17% Similarity=0.120 Sum_probs=88.4
Q ss_pred CCCHHHHHH-HHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCc
Q 029836 2 MTSPDEAQF-FSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA 80 (187)
Q Consensus 2 ~~~~~~~~~-l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~ 80 (187)
+.++...+. +..+....++.+|||+|||+|..++.+++. ..+|+++|+++.+++.|+++++.+++. ++++++|+
T Consensus 272 q~n~~~~e~l~~~~~~~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~ 346 (425)
T 2jjq_A 272 QTNSYQAVNLVRKVSELVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASD 346 (425)
T ss_dssp CSBHHHHHHHHHHHHHHCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCT
T ss_pred ccCHHHHHHHHHHhhccCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECCh
Confidence 344554443 444444566789999999999999999975 469999999999999999999998884 99999999
Q ss_pred hHHHHHHhhcccCCCceeEEEEcCCCcccH-HHHHHHHhcccCCeEEEEe
Q 029836 81 LPLLDQLIQDEKYHGTFDFVFVDADKDNYV-NYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 81 ~~~l~~~~~~~~~~~~~D~v~~d~~~~~~~-~~~~~~~~~L~~gG~lv~~ 129 (187)
.+.++ .+||+|++|++..... .+++.+ ..|+|+|+++++
T Consensus 347 ~~~~~---------~~fD~Vv~dPPr~g~~~~~~~~l-~~l~p~givyvs 386 (425)
T 2jjq_A 347 REVSV---------KGFDTVIVDPPRAGLHPRLVKRL-NREKPGVIVYVS 386 (425)
T ss_dssp TTCCC---------TTCSEEEECCCTTCSCHHHHHHH-HHHCCSEEEEEE
T ss_pred HHcCc---------cCCCEEEEcCCccchHHHHHHHH-HhcCCCcEEEEE
Confidence 87542 2799999998855443 455555 458999999874
No 190
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.50 E-value=1e-13 Score=103.09 Aligned_cols=104 Identities=19% Similarity=0.234 Sum_probs=84.5
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCC----CceEEEeCCchHHHHHHhhcccC
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVA----HKIDFREGPALPLLDQLIQDEKY 93 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~----~~i~~~~~d~~~~l~~~~~~~~~ 93 (187)
.++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++...+.. .++++..+|..+.. . .
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~-----~ 98 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS--F-----H 98 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC--S-----C
T ss_pred CCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC--C-----C
Confidence 45779999999999999999986 569999999999999999998877662 46899999986531 1 1
Q ss_pred CCceeEEEEcCCC---cc---cHHHHHHHHhcccCCeEEEEeCc
Q 029836 94 HGTFDFVFVDADK---DN---YVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 94 ~~~~D~v~~d~~~---~~---~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.++||+|++.... .+ ...+++.+.++|+|||.+++.+.
T Consensus 99 ~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 99 DSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp TTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 5689999987641 22 23789999999999999998754
No 191
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.50 E-value=1e-13 Score=98.45 Aligned_cols=100 Identities=11% Similarity=0.037 Sum_probs=81.9
Q ss_pred hhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
...++.+|||+|||+|..+..+++.. .+++++|+++.+++.++++ .+++++..+| . + + ..+
T Consensus 14 ~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~------~~~v~~~~~d-~---~-~-----~~~ 74 (170)
T 3i9f_A 14 FEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK------FDSVITLSDP-K---E-I-----PDN 74 (170)
T ss_dssp HSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH------CTTSEEESSG-G---G-S-----CTT
T ss_pred CcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh------CCCcEEEeCC-C---C-C-----CCC
Confidence 45567799999999999999999764 4999999999999999887 2689999988 1 1 1 156
Q ss_pred ceeEEEEcCC---CcccHHHHHHHHhcccCCeEEEEeCcCCC
Q 029836 96 TFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTLWG 134 (187)
Q Consensus 96 ~~D~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
+||+|++... ..+...+++.+.+.|+|||.+++.+....
T Consensus 75 ~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 116 (170)
T 3i9f_A 75 SVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKE 116 (170)
T ss_dssp CEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred ceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCcc
Confidence 8999998765 34567899999999999999999876544
No 192
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.49 E-value=2.2e-14 Score=106.83 Aligned_cols=102 Identities=18% Similarity=0.088 Sum_probs=80.4
Q ss_pred HHHHHHHh--hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHH
Q 029836 9 QFFSMLLK--LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQ 86 (187)
Q Consensus 9 ~~l~~l~~--~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~ 86 (187)
.++..++. ..++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++ .++++++++|..+.++.
T Consensus 36 ~l~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~d~~~~~~~ 106 (226)
T 3m33_A 36 LTFDLWLSRLLTPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARAN------APHADVYEWNGKGELPA 106 (226)
T ss_dssp HHHHHHHHHHCCTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHH------CTTSEEEECCSCSSCCT
T ss_pred HHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHh------CCCceEEEcchhhccCC
Confidence 44444443 346789999999999999999986 47999999999999999987 25799999998644331
Q ss_pred HhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEE
Q 029836 87 LIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIG 127 (187)
Q Consensus 87 ~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv 127 (187)
- .+++||+|++.. +...+++.+.++|||||.++
T Consensus 107 ~-----~~~~fD~v~~~~---~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 107 G-----LGAPFGLIVSRR---GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp T-----CCCCEEEEEEES---CCSGGGGGHHHHEEEEEEEE
T ss_pred c-----CCCCEEEEEeCC---CHHHHHHHHHHHcCCCcEEE
Confidence 0 036899999873 45567788899999999998
No 193
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.49 E-value=1.1e-13 Score=110.50 Aligned_cols=102 Identities=17% Similarity=0.099 Sum_probs=84.0
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCcee
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D 98 (187)
++++|||+| |+|..+..++...+ ..+|+++|+++.+++.|+++++..++. +++++++|+.+.++... .++||
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~-~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~~-----~~~fD 243 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGL-PKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDYA-----LHKFD 243 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTC-CSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTTT-----SSCBS
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhhc-----cCCcc
Confidence 478999999 99999999987644 579999999999999999999999885 89999999987444210 45899
Q ss_pred EEEEcCCC--cccHHHHHHHHhcccCCe-EEEE
Q 029836 99 FVFVDADK--DNYVNYHKRLIELVKVGG-VIGY 128 (187)
Q Consensus 99 ~v~~d~~~--~~~~~~~~~~~~~L~~gG-~lv~ 128 (187)
+|++|++. .....+++.+.+.|+||| ++++
T Consensus 244 ~Vi~~~p~~~~~~~~~l~~~~~~LkpgG~~~~~ 276 (373)
T 2qm3_A 244 TFITDPPETLEAIRAFVGRGIATLKGPRCAGYF 276 (373)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHTBCSTTCEEEE
T ss_pred EEEECCCCchHHHHHHHHHHHHHcccCCeEEEE
Confidence 99999752 234678899999999999 4344
No 194
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.48 E-value=2.7e-13 Score=105.35 Aligned_cols=106 Identities=17% Similarity=0.226 Sum_probs=77.0
Q ss_pred CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCC-----ceEEEeCCchH-----HHHHHhh
Q 029836 20 AKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAH-----KIDFREGPALP-----LLDQLIQ 89 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~-----~i~~~~~d~~~-----~l~~~~~ 89 (187)
+.+|||||||+|..+..++.. + ..+|+|+|+++.+++.|++.....+... ++++.+.+... .++...
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~-~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~- 125 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYG-E-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF- 125 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC-
T ss_pred CCeEEEEecCCcHhHHHHHhc-C-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc-
Confidence 579999999999766655543 2 4799999999999999999888765421 25677776621 122110
Q ss_pred cccCCCceeEEEEcCC------CcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 90 DEKYHGTFDFVFVDAD------KDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 90 ~~~~~~~~D~v~~d~~------~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
..++||+|++... .++...+++.+.++|||||++++...
T Consensus 126 ---~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 126 ---YFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp ---CSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---cCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 1468999986532 23557899999999999999998654
No 195
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.48 E-value=1.3e-13 Score=103.89 Aligned_cols=101 Identities=13% Similarity=0.140 Sum_probs=82.9
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCcee
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D 98 (187)
++.+|||+|||+|..+..+++.. ..+++++|+++.+++.+++++... .+++++++|..+. + + ..++||
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~-~-~-----~~~~fD 160 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETA-T-L-----PPNTYD 160 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGC-C-C-----CSSCEE
T ss_pred CCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHC-C-C-----CCCCeE
Confidence 56899999999999999988764 468999999999999999887654 5799999998763 2 1 046899
Q ss_pred EEEEcCCC-----cccHHHHHHHHhcccCCeEEEEeCc
Q 029836 99 FVFVDADK-----DNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 99 ~v~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
+|++.... .+...+++.+.++|+|||++++.+.
T Consensus 161 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 161 LIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 99987652 3457789999999999999998764
No 196
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.48 E-value=2e-13 Score=97.40 Aligned_cols=104 Identities=13% Similarity=0.148 Sum_probs=81.2
Q ss_pred CCHHHHHHHHHHHhh--cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCc
Q 029836 3 TSPDEAQFFSMLLKL--INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA 80 (187)
Q Consensus 3 ~~~~~~~~l~~l~~~--~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~ 80 (187)
-.+++..++.. +.. .++.+|||+|||+|..+..+++. . +++++|+++.+++. .++++++++|+
T Consensus 6 P~~~~~~l~~~-l~~~~~~~~~vLD~GcG~G~~~~~l~~~---~-~v~gvD~s~~~~~~----------~~~~~~~~~d~ 70 (170)
T 3q87_B 6 PGEDTYTLMDA-LEREGLEMKIVLDLGTSTGVITEQLRKR---N-TVVSTDLNIRALES----------HRGGNLVRADL 70 (170)
T ss_dssp CCHHHHHHHHH-HHHHTCCSCEEEEETCTTCHHHHHHTTT---S-EEEEEESCHHHHHT----------CSSSCEEECST
T ss_pred cCccHHHHHHH-HHhhcCCCCeEEEeccCccHHHHHHHhc---C-cEEEEECCHHHHhc----------ccCCeEEECCh
Confidence 45677777777 444 67789999999999999999875 3 99999999999876 36789999999
Q ss_pred hHHHHHHhhcccCCCceeEEEEcCCCc------------ccHHHHHHHHhcccCCeEEEEeC
Q 029836 81 LPLLDQLIQDEKYHGTFDFVFVDADKD------------NYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 81 ~~~l~~~~~~~~~~~~~D~v~~d~~~~------------~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.+.++ .++||+|+++.+.. ....+++.+.+.+ |||.+++..
T Consensus 71 ~~~~~--------~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 71 LCSIN--------QESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLV 123 (170)
T ss_dssp TTTBC--------GGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEE
T ss_pred hhhcc--------cCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEE
Confidence 76432 36899999986521 2356777888878 999998754
No 197
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.48 E-value=5.3e-14 Score=106.94 Aligned_cols=110 Identities=16% Similarity=0.063 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHH
Q 029836 5 PDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL 84 (187)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l 84 (187)
+...+.+...+...++.+|||||||+|.++..+++ + +.+|+++|+++.+++.++++. +++++++|+.+.
T Consensus 20 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~--~-~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~- 88 (261)
T 3ege_A 20 IRIVNAIINLLNLPKGSVIADIGAGTGGYSVALAN--Q-GLFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENL- 88 (261)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT--T-TCEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSC-
T ss_pred HHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh--C-CCEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhC-
Confidence 34444454555556788999999999999999997 2 689999999998887665432 899999999653
Q ss_pred HHHhhcccCCCceeEEEEcCC---CcccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 85 DQLIQDEKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
+ + .+++||+|++... ..+...+++.+.+.|| ||.+++.+..
T Consensus 89 ~-~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 89 A-L-----PDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp C-S-----CTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred C-C-----CCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcC
Confidence 2 1 1578999998764 4567889999999999 9977765543
No 198
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.48 E-value=2.2e-13 Score=111.98 Aligned_cols=100 Identities=14% Similarity=0.172 Sum_probs=83.7
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.++++|||||||+|..+..+++. + ..+|+++|+++ +++.|+++++.+++.++++++++|..+.. + .++|
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~-~-~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~--~------~~~f 225 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS--L------PEQV 225 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHT-T-CSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCC--C------SSCE
T ss_pred cCCCEEEEecCcccHHHHHHHHc-C-CCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCc--c------CCCe
Confidence 46789999999999999988874 3 57999999998 99999999999999889999999997641 1 4589
Q ss_pred eEEEEcCC-----CcccHHHHHHHHhcccCCeEEEE
Q 029836 98 DFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 98 D~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
|+|++... .+.....+..+.+.|+|||++++
T Consensus 226 D~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 226 DIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp EEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred EEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 99998754 24456677778899999999984
No 199
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.48 E-value=1.4e-13 Score=109.62 Aligned_cols=103 Identities=18% Similarity=0.220 Sum_probs=86.8
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.++.+|||||||+|..+..+++..+ +.+++++|+ +.+++.+++++...++.++++++.+|..+.+ ...|
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---------~~~~ 249 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAP-HLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPL---------PVTA 249 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC---------SCCE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC-CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcC---------CCCC
Confidence 3568999999999999999999876 689999999 9999999999999888779999999986532 2359
Q ss_pred eEEEEcCCC-----cccHHHHHHHHhcccCCeEEEEeCc
Q 029836 98 DFVFVDADK-----DNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 98 D~v~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
|+|++.... .....+++.+.+.|+|||.+++.+.
T Consensus 250 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 250 DVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 999987542 1234789999999999999888665
No 200
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.48 E-value=6.1e-13 Score=105.56 Aligned_cols=106 Identities=13% Similarity=0.021 Sum_probs=88.2
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.++.+|||||||+|..+..+++..| +.+++++|+ +.+++.++++++..+..++++++.+|..+. + ...+
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~--------~~~~ 257 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFP-ELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKE-S--------YPEA 257 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTS-C--------CCCC
T ss_pred CCCCEEEEECCcccHHHHHHHHHCC-CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccC-C--------CCCC
Confidence 4567999999999999999999886 689999999 999999999999988877899999998754 1 2234
Q ss_pred eEEEEcCCC-----cccHHHHHHHHhcccCCeEEEEeCcCCC
Q 029836 98 DFVFVDADK-----DNYVNYHKRLIELVKVGGVIGYDNTLWG 134 (187)
Q Consensus 98 D~v~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
|+|++.... +....+++.+.+.|+|||.+++.+....
T Consensus 258 D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 299 (359)
T 1x19_A 258 DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVID 299 (359)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCC
T ss_pred CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccC
Confidence 999987542 2257789999999999999987765543
No 201
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.47 E-value=4.4e-13 Score=105.21 Aligned_cols=107 Identities=17% Similarity=0.204 Sum_probs=89.0
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..+..+++.++ +.+++++|++ .+++.+++++...++.++++++.+|..+. .. .+.|
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~------~~~~ 233 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNP-NAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEV--DY------GNDY 233 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTS--CC------CSCE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccC--CC------CCCC
Confidence 5668999999999999999999886 6899999999 99999999999988877899999998753 11 3459
Q ss_pred eEEEEcCCC-----cccHHHHHHHHhcccCCeEEEEeCcCCC
Q 029836 98 DFVFVDADK-----DNYVNYHKRLIELVKVGGVIGYDNTLWG 134 (187)
Q Consensus 98 D~v~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
|+|++.... +....+++.+.+.|+|||.+++.+....
T Consensus 234 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 234 DLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred cEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 999986541 3346889999999999998888766543
No 202
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.47 E-value=2.3e-13 Score=102.21 Aligned_cols=105 Identities=13% Similarity=0.061 Sum_probs=81.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHH-hhcccCCCc
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQL-IQDEKYHGT 96 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~-~~~~~~~~~ 96 (187)
.+..+|||+|||+|..+..+++..+ +|+++|+++.+++.+++++. ..+++++++|..+..... .+. ...
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~~~---~~~ 124 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENT----AANISYRLLDGLVPEQAAQIHS---EIG 124 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSC----CTTEEEEECCTTCHHHHHHHHH---HHC
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCc----ccCceEEECccccccccccccc---ccC
Confidence 4557999999999999999998753 89999999999999998772 248999999997643211 100 135
Q ss_pred eeEEEEcCC-----CcccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 97 FDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 97 ~D~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
||+|++... ..+...+++.+.+.|||||++++.+..
T Consensus 125 ~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 125 DANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp SCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred ccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 899998754 235678999999999999998776654
No 203
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.47 E-value=6.5e-14 Score=103.54 Aligned_cols=103 Identities=17% Similarity=0.135 Sum_probs=77.6
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHH----HHcCCCCceEEEeCCchHHHHHHhhccc
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPII----QKAGVAHKIDFREGPALPLLDQLIQDEK 92 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~----~~~~~~~~i~~~~~d~~~~l~~~~~~~~ 92 (187)
..++.+|||+|||+|..+..+++..| +.+|+++|+++.+++.+.++. ...+. ++++++++|+.+. +..
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~-~~v~~~~~d~~~l-~~~----- 96 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNP-SRLVVALDADKSRMEKISAKAAAKPAKGGL-PNLLYLWATAERL-PPL----- 96 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCT-TEEEEEEESCGGGGHHHHHHHTSCGGGTCC-TTEEEEECCSTTC-CSC-----
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhhhhcCC-CceEEEecchhhC-CCC-----
Confidence 45678999999999999999999876 689999999999888643333 23444 5899999999763 211
Q ss_pred CCCceeEEEEcCCC--------cccHHHHHHHHhcccCCeEEEEe
Q 029836 93 YHGTFDFVFVDADK--------DNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 93 ~~~~~D~v~~d~~~--------~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
.+. |.|++.... .+...+++.+.++|||||.+++.
T Consensus 97 -~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 97 -SGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp -CCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEE
T ss_pred -CCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEE
Confidence 334 777654421 22367899999999999999984
No 204
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.47 E-value=2.7e-13 Score=107.55 Aligned_cols=104 Identities=18% Similarity=0.219 Sum_probs=87.2
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++++...++.++++++.+|..+.+ ...|
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---------~~~~ 250 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAP-HVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPL---------PRKA 250 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCC---------SSCE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCC-CCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCC---------CCCc
Confidence 3567999999999999999999876 689999999 9999999999999888779999999986532 2359
Q ss_pred eEEEEcCCC-----cccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 98 DFVFVDADK-----DNYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 98 D~v~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
|+|++.... .....+++.+.+.|+|||.+++.+..
T Consensus 251 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 251 DAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 999986542 12357899999999999999887665
No 205
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.47 E-value=3.9e-13 Score=107.36 Aligned_cols=115 Identities=19% Similarity=0.223 Sum_probs=90.0
Q ss_pred CCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchH
Q 029836 3 TSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP 82 (187)
Q Consensus 3 ~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~ 82 (187)
+.+.....+..++ ..++.+|||+|||+|..++.++...+ .++++++|+++.+++.|+++++..++.+++++.++|+.+
T Consensus 202 l~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~-~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~ 279 (373)
T 3tm4_A 202 LKASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRY-SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQ 279 (373)
T ss_dssp CCHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTC-CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGG
T ss_pred ccHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhh
Confidence 3455666666666 66778999999999999999998743 458999999999999999999999988899999999987
Q ss_pred HHHHHhhcccCCCceeEEEEcCCC-------cc----cHHHHHHHHhcccCCeEEE
Q 029836 83 LLDQLIQDEKYHGTFDFVFVDADK-------DN----YVNYHKRLIELVKVGGVIG 127 (187)
Q Consensus 83 ~l~~~~~~~~~~~~~D~v~~d~~~-------~~----~~~~~~~~~~~L~~gG~lv 127 (187)
... . .++||+|+++++. .. +..+++.+.+.| .|+.++
T Consensus 280 ~~~-~------~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~ 327 (373)
T 3tm4_A 280 LSQ-Y------VDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVF 327 (373)
T ss_dssp GGG-T------CSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEE
T ss_pred CCc-c------cCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEE
Confidence 532 1 4689999998761 11 356777888877 444343
No 206
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.47 E-value=2.6e-12 Score=94.05 Aligned_cols=110 Identities=16% Similarity=0.158 Sum_probs=84.7
Q ss_pred CCHHHHHHHHHHHh---hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCC
Q 029836 3 TSPDEAQFFSMLLK---LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGP 79 (187)
Q Consensus 3 ~~~~~~~~l~~l~~---~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d 79 (187)
+++.....+...+. ..++.+|||+|||+|..+..++.. + ..+++++|+++.+++.++++++..++ +++++++|
T Consensus 30 ~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d 105 (207)
T 1wy7_A 30 TPGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLL-G-AKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGD 105 (207)
T ss_dssp CCHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESC
T ss_pred CchHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECc
Confidence 34444444444443 235789999999999999999876 2 35899999999999999999988876 79999999
Q ss_pred chHHHHHHhhcccCCCceeEEEEcCC-----CcccHHHHHHHHhcccCCeEEEE
Q 029836 80 ALPLLDQLIQDEKYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 80 ~~~~l~~~~~~~~~~~~~D~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
+.++ .++||+|+++++ ......+++.+.+.+ |+++++
T Consensus 106 ~~~~----------~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~ 147 (207)
T 1wy7_A 106 VSEF----------NSRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSI 147 (207)
T ss_dssp GGGC----------CCCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEE
T ss_pred hHHc----------CCCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEEE
Confidence 9763 348999999976 133467888888887 666654
No 207
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.46 E-value=1.8e-13 Score=108.17 Aligned_cols=100 Identities=14% Similarity=0.205 Sum_probs=83.1
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
..+.+|||+|||+|..+..+++..+ ..+++++|+++.+++.+++++...+. +.+++.+|..+.. .++|
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~--~~~~~~~d~~~~~---------~~~f 262 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHSP-KIRLTLCDVSAPAVEASRATLAANGV--EGEVFASNVFSEV---------KGRF 262 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHCT-TCBCEEEESBHHHHHHHHHHHHHTTC--CCEEEECSTTTTC---------CSCE
T ss_pred CCCCeEEEecCccCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCC--CCEEEEccccccc---------cCCe
Confidence 3567999999999999999998865 57999999999999999999998876 3677888886532 4689
Q ss_pred eEEEEcCCCc--------ccHHHHHHHHhcccCCeEEEEe
Q 029836 98 DFVFVDADKD--------NYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 98 D~v~~d~~~~--------~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
|+|+++.... ....+++.+.+.|+|||.+++.
T Consensus 263 D~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 302 (343)
T 2pjd_A 263 DMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIV 302 (343)
T ss_dssp EEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred eEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 9999986522 2467889999999999999874
No 208
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.46 E-value=7.2e-13 Score=103.20 Aligned_cols=120 Identities=14% Similarity=0.162 Sum_probs=90.7
Q ss_pred HHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHH
Q 029836 7 EAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQ 86 (187)
Q Consensus 7 ~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~ 86 (187)
...++..++...++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.++++++..|+ .+++++++|+.+..+.
T Consensus 90 ~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~-~~v~~~~~D~~~~~~~ 168 (309)
T 2b9e_A 90 ASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV-SCCELAEEDFLAVSPS 168 (309)
T ss_dssp GGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCGGGSCTT
T ss_pred HHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEeCChHhcCcc
Confidence 344555566666778999999999999999998765468999999999999999999999998 5899999998765332
Q ss_pred HhhcccCCCceeEEEEcCCC-------c--cc------------------HHHHHHHHhcccCCeEEEEeCcC
Q 029836 87 LIQDEKYHGTFDFVFVDADK-------D--NY------------------VNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 87 ~~~~~~~~~~~D~v~~d~~~-------~--~~------------------~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
... .++||.|++|++. . +. ..+++.+.++++ ||.|++..+.
T Consensus 169 ~~~----~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs 236 (309)
T 2b9e_A 169 DPR----YHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCS 236 (309)
T ss_dssp CGG----GTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESC
T ss_pred ccc----cCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCC
Confidence 100 1479999998651 0 10 134666667776 9999976554
No 209
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.46 E-value=1.8e-13 Score=104.02 Aligned_cols=101 Identities=17% Similarity=0.233 Sum_probs=74.0
Q ss_pred hhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 16 KLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
...++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|+++++... -+..+...+.. ..... .+
T Consensus 42 ~l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~~--v~~~~~~~~~~-~~~~~------~~ 109 (261)
T 3iv6_A 42 NIVPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADRC--VTIDLLDITAE-IPKEL------AG 109 (261)
T ss_dssp TCCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSSC--CEEEECCTTSC-CCGGG------TT
T ss_pred CCCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhcc--ceeeeeecccc-ccccc------CC
Confidence 4456789999999999999999975 5799999999999999999876541 12333222220 00111 46
Q ss_pred ceeEEEEcCC-----CcccHHHHHHHHhcccCCeEEEEe
Q 029836 96 TFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 96 ~~D~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+||+|+++.. .++....+..+.++| |||.+++.
T Consensus 110 ~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 110 HFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred CccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence 8999999864 234566888888999 99999875
No 210
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.46 E-value=2.5e-13 Score=106.70 Aligned_cols=103 Identities=12% Similarity=0.042 Sum_probs=87.1
Q ss_pred CEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEE
Q 029836 21 KNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFV 100 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v 100 (187)
.+|||+|||+|..+..+++..| +.+++++|+ +.+++.+++++...++.++++++.+|..+. . .++||+|
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~------~~~~D~v 237 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEP-SARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQE---V------PSNGDIY 237 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTC---C------CSSCSEE
T ss_pred CEEEEeCCCchHHHHHHHHHCC-CCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCC---C------CCCCCEE
Confidence 8999999999999999999886 689999999 999999999998877777899999998752 2 4579999
Q ss_pred EEcCCC-----cccHHHHHHHHhcccCCeEEEEeCcCCC
Q 029836 101 FVDADK-----DNYVNYHKRLIELVKVGGVIGYDNTLWG 134 (187)
Q Consensus 101 ~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
++.... .....+++.+.+.|+|||.+++.+....
T Consensus 238 ~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 276 (334)
T 2ip2_A 238 LLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTIS 276 (334)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred EEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 987542 2234889999999999999998876653
No 211
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.46 E-value=3.3e-13 Score=100.97 Aligned_cols=108 Identities=13% Similarity=0.193 Sum_probs=85.0
Q ss_pred HHHHHHhh-cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHh
Q 029836 10 FFSMLLKL-INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (187)
Q Consensus 10 ~l~~l~~~-~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~ 88 (187)
++..+... .++.+|||+|||+|..+..++.. +.+++++|+++.+++.++++. ...+++++++|..+.. +
T Consensus 43 ~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~~--~- 112 (242)
T 3l8d_A 43 IIPFFEQYVKKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSLP--F- 112 (242)
T ss_dssp HHHHHHHHSCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBCS--S-
T ss_pred HHHHHHHHcCCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcCC--C-
Confidence 33444433 35679999999999999999986 569999999999999888764 2368999999987541 1
Q ss_pred hcccCCCceeEEEEcCC---CcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 89 QDEKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 89 ~~~~~~~~~D~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
..++||+|++... ..+...+++.+.+.|+|||++++...
T Consensus 113 ----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 154 (242)
T 3l8d_A 113 ----ENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAIL 154 (242)
T ss_dssp ----CTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ----CCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEc
Confidence 1568999998764 34567899999999999999998764
No 212
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.46 E-value=6.9e-13 Score=102.38 Aligned_cols=108 Identities=13% Similarity=0.124 Sum_probs=77.0
Q ss_pred CCCEEEEEcccccHHHHHHH----hhCCCCCEE--EEEeCCchHHHHHHHHHHHc-CCCCce--EEEeCCchHHHHHHhh
Q 029836 19 NAKNTMEIGVFTGYSLLATA----LAIPDDGKI--LALDITKEHYEKGLPIIQKA-GVAHKI--DFREGPALPLLDQLIQ 89 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~----~~~~~~~~v--~~vd~~~~~~~~a~~~~~~~-~~~~~i--~~~~~d~~~~l~~~~~ 89 (187)
++.+|||||||+|..+..++ ...+ ..++ +++|+++++++.|++++... +. +++ .+..+++.++......
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~-~~~v~~~~vD~S~~ml~~a~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYP-GVCINNEVVEPSAEQIAKYKELVAKTSNL-ENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHST-TCEEEEEEECSCHHHHHHHHHHHHTCSSC-TTEEEEEECSCHHHHHHHHHT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCC-CceeeEEEEeCCHHHHHHHHHHHHhccCC-CcceEEEEecchhhhhhhhcc
Confidence 35699999999998766543 3333 4544 99999999999999998764 33 444 4456777554321100
Q ss_pred cccCCCceeEEEEcCC---CcccHHHHHHHHhcccCCeEEEEe
Q 029836 90 DEKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 90 ~~~~~~~~D~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+..+++||+|++... ..+....++++.++|||||.+++.
T Consensus 130 -~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 130 -KKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp -TTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEE
T ss_pred -ccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEE
Confidence 001468999998754 456788999999999999999985
No 213
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.46 E-value=1.3e-12 Score=100.13 Aligned_cols=111 Identities=9% Similarity=-0.005 Sum_probs=83.4
Q ss_pred CCCEEEEEcccc---cHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHH--hh--cc
Q 029836 19 NAKNTMEIGVFT---GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQL--IQ--DE 91 (187)
Q Consensus 19 ~~~~vLeiG~g~---G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~--~~--~~ 91 (187)
...+|||||||+ |..+..+.+..+ +.+|+++|+++.+++.|++++.. ..+++++++|..+....+ .. +.
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p-~~~v~~vD~sp~~l~~Ar~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~ 152 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNP-DARVVYVDIDPMVLTHGRALLAK---DPNTAVFTADVRDPEYILNHPDVRRM 152 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCT-TCEEEEEESSHHHHHHHHHHHTT---CTTEEEEECCTTCHHHHHHSHHHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCC-CCEEEEEECChHHHHHHHHhcCC---CCCeEEEEeeCCCchhhhccchhhcc
Confidence 457999999999 988766666555 68999999999999999998843 268999999987532110 00 00
Q ss_pred cCCCceeEEEEcCC-----CcccHHHHHHHHhcccCCeEEEEeCcCC
Q 029836 92 KYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNTLW 133 (187)
Q Consensus 92 ~~~~~~D~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
.+.++||+|++... .+....+++++.+.|+|||+|++.+...
T Consensus 153 ~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 153 IDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp CCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 01257999998753 2246789999999999999999987654
No 214
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.45 E-value=3.8e-13 Score=95.49 Aligned_cols=99 Identities=15% Similarity=0.114 Sum_probs=75.4
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHH-----HHHhhcc
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL-----DQLIQDE 91 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l-----~~~~~~~ 91 (187)
..++.+|||+|||+|..+..+++.++++.+++++|+++ +++. .++++.++|..+.. +...
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~--- 84 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELVMKALLERV--- 84 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHHHHHHHHHH---
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchhhhhhhccC---
Confidence 34567999999999999999998864468999999999 6532 57999999986641 1111
Q ss_pred cCCCceeEEEEcCCCc---cc-----------HHHHHHHHhcccCCeEEEEeCc
Q 029836 92 KYHGTFDFVFVDADKD---NY-----------VNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 92 ~~~~~~D~v~~d~~~~---~~-----------~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
..++||+|+++.... .. ..+++.+.++|+|||.+++...
T Consensus 85 -~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (180)
T 1ej0_A 85 -GDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF 137 (180)
T ss_dssp -TTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -CCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 146899999976521 11 5788999999999999997543
No 215
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.45 E-value=8.3e-13 Score=102.88 Aligned_cols=108 Identities=14% Similarity=0.095 Sum_probs=82.9
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcC------CCCceEEEeCCchHHH--HHHhhc
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAG------VAHKIDFREGPALPLL--DQLIQD 90 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~------~~~~i~~~~~d~~~~l--~~~~~~ 90 (187)
++.+|||+|||+|..+..+++. + ..+++++|+++.+++.++++....+ ...+++++++|..+.. ..+...
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG-R-INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCEEEEECCCCcHHHHHHHhc-C-CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 6789999999999999998874 3 5799999999999999999887652 2257999999987642 011100
Q ss_pred ccCCCceeEEEEcCCC-------cccHHHHHHHHhcccCCeEEEEeCc
Q 029836 91 EKYHGTFDFVFVDADK-------DNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 91 ~~~~~~~D~v~~d~~~-------~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.++||+|++.... .....+++.+.+.|+|||++++...
T Consensus 112 ---~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 112 ---QMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp ---TCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ---CCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 3489999987542 2235889999999999999998643
No 216
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.45 E-value=1.8e-12 Score=99.70 Aligned_cols=115 Identities=16% Similarity=0.031 Sum_probs=80.5
Q ss_pred HHHHHHHHHhh---cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeC-CchHHHHHHHHH-----HHcCCC----Cce
Q 029836 7 EAQFFSMLLKL---INAKNTMEIGVFTGYSLLATALAIPDDGKILALDI-TKEHYEKGLPII-----QKAGVA----HKI 73 (187)
Q Consensus 7 ~~~~l~~l~~~---~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~-~~~~~~~a~~~~-----~~~~~~----~~i 73 (187)
...+...+... .++++|||+|||+|..++.+++. + ..+|+++|+ ++.+++.+++++ +..++. +++
T Consensus 64 ~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~-~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v 141 (281)
T 3bzb_A 64 ARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLA-G-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASP 141 (281)
T ss_dssp HHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHT-T-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCC
T ss_pred HHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHc-C-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCe
Confidence 44445555433 46789999999999999988875 2 359999999 899999999999 555553 478
Q ss_pred EEEeCCchH----HHHHHhhcccCCCceeEEEE-cCC--CcccHHHHHHHHhccc---C--CeEEEE
Q 029836 74 DFREGPALP----LLDQLIQDEKYHGTFDFVFV-DAD--KDNYVNYHKRLIELVK---V--GGVIGY 128 (187)
Q Consensus 74 ~~~~~d~~~----~l~~~~~~~~~~~~~D~v~~-d~~--~~~~~~~~~~~~~~L~---~--gG~lv~ 128 (187)
++...+..+ ....+. .++||+|++ |.. ......+++.+.++|+ | ||.+++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~-----~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 142 KVVPYRWGDSPDSLQRCTG-----LQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp EEEECCTTSCTHHHHHHHS-----CSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred EEEEecCCCccHHHHhhcc-----CCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 887554322 222111 468999987 443 3457789999999999 9 997654
No 217
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.45 E-value=3.9e-13 Score=100.34 Aligned_cols=98 Identities=13% Similarity=0.141 Sum_probs=79.2
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..+..+++.. .+++++|+++.+++.+++++ ++++++++|..+... .++|
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~--------~~~~ 101 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRL------PDATLHQGDMRDFRL--------GRKF 101 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCCC--------SSCE
T ss_pred CCCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHccc--------CCCC
Confidence 456899999999999999999874 38999999999999998864 468999999865421 4689
Q ss_pred eEEEEcCC-------CcccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 98 DFVFVDAD-------KDNYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 98 D~v~~d~~-------~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
|+|++... ......+++.+.++|+|||.++++...
T Consensus 102 D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (239)
T 3bxo_A 102 SAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWW 143 (239)
T ss_dssp EEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred cEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecc
Confidence 99995332 134568899999999999999997643
No 218
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.44 E-value=8.3e-13 Score=95.26 Aligned_cols=104 Identities=9% Similarity=0.027 Sum_probs=81.7
Q ss_pred HHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHh
Q 029836 9 QFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (187)
Q Consensus 9 ~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~ 88 (187)
.++..+ ..++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++ .+++++++|..+.. +.
T Consensus 38 ~~l~~~--~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~------~~~~~~~~d~~~~~--~~ 104 (195)
T 3cgg_A 38 RLIDAM--APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDF------PEARWVVGDLSVDQ--IS 104 (195)
T ss_dssp HHHHHH--SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC------TTSEEEECCTTTSC--CC
T ss_pred HHHHHh--ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhC------CCCcEEEcccccCC--CC
Confidence 344444 346789999999999999999876 469999999999999998866 36889999987531 10
Q ss_pred hcccCCCceeEEEEcCC-C-----cccHHHHHHHHhcccCCeEEEEeC
Q 029836 89 QDEKYHGTFDFVFVDAD-K-----DNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 89 ~~~~~~~~~D~v~~d~~-~-----~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.++||+|++.+. . .....+++.+.+.|+|||.+++..
T Consensus 105 -----~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~ 147 (195)
T 3cgg_A 105 -----ETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGF 147 (195)
T ss_dssp -----CCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----CCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 468999999743 1 234778999999999999999854
No 219
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.44 E-value=2.4e-13 Score=99.88 Aligned_cols=96 Identities=15% Similarity=0.161 Sum_probs=77.5
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCcee
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D 98 (187)
++.+|||+|||+|..+..+ + ..+++++|+++.+++.++++. .+++++++|..+. + . ..++||
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~-~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~-~-----~~~~fD 97 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----P-YPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEAL-P-F-----PGESFD 97 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----C-CSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSC-C-S-----CSSCEE
T ss_pred CCCeEEEECCCCCHhHHhC----C-CCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccC-C-C-----CCCcEE
Confidence 6789999999999988776 2 248999999999999998876 4788999988653 2 1 146899
Q ss_pred EEEEcCC---CcccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 99 FVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 99 ~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
+|++... ..+...+++.+.++|+|||.+++....
T Consensus 98 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 98 VVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp EEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecC
Confidence 9998765 345678999999999999999987644
No 220
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.44 E-value=1.3e-12 Score=106.19 Aligned_cols=115 Identities=12% Similarity=0.133 Sum_probs=89.2
Q ss_pred HHHHHHHHHhh---cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH
Q 029836 7 EAQFFSMLLKL---INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (187)
Q Consensus 7 ~~~~l~~l~~~---~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 83 (187)
...++..++.. .+..+|||+|||+|..+..+++. ..+|+++|+++.+++.|++|++.+++ ++++++++|+.+.
T Consensus 271 ~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~-~~v~f~~~d~~~~ 346 (433)
T 1uwv_A 271 NQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGL-QNVTFYHENLEED 346 (433)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCTTSC
T ss_pred HHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEECCHHHH
Confidence 44455555443 35679999999999999999976 57999999999999999999999888 4899999999875
Q ss_pred HHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEe
Q 029836 84 LDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 84 l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
++.+... .++||+|++|++.....+.++.+. .++|++++.++
T Consensus 347 l~~~~~~---~~~fD~Vv~dPPr~g~~~~~~~l~-~~~p~~ivyvs 388 (433)
T 1uwv_A 347 VTKQPWA---KNGFDKVLLDPARAGAAGVMQQII-KLEPIRIVYVS 388 (433)
T ss_dssp CSSSGGG---TTCCSEEEECCCTTCCHHHHHHHH-HHCCSEEEEEE
T ss_pred hhhhhhh---cCCCCEEEECCCCccHHHHHHHHH-hcCCCeEEEEE
Confidence 4431100 458999999998666666666554 47899988764
No 221
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.42 E-value=2.3e-13 Score=99.84 Aligned_cols=110 Identities=11% Similarity=0.055 Sum_probs=84.0
Q ss_pred HHHHHHhh-cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHh
Q 029836 10 FFSMLLKL-INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (187)
Q Consensus 10 ~l~~l~~~-~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~ 88 (187)
+...+... .++.+|||+|||+|..+..+++..+ .+++++|+++.+++.++++... .+++++.++|+.+. + +.
T Consensus 32 ~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~~---~~~i~~~~~d~~~~-~-~~ 104 (215)
T 2pxx_A 32 FRALLEPELRPEDRILVLGCGNSALSYELFLGGF--PNVTSVDYSSVVVAAMQACYAH---VPQLRWETMDVRKL-D-FP 104 (215)
T ss_dssp HHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTTC--CCEEEEESCHHHHHHHHHHTTT---CTTCEEEECCTTSC-C-SC
T ss_pred HHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcCC--CcEEEEeCCHHHHHHHHHhccc---CCCcEEEEcchhcC-C-CC
Confidence 33334333 4567999999999999999998632 3899999999999999988764 25899999998654 1 11
Q ss_pred hcccCCCceeEEEEcCC------------------CcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 89 QDEKYHGTFDFVFVDAD------------------KDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 89 ~~~~~~~~~D~v~~d~~------------------~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.++||+|++... ......+++.+.++|+|||.+++.+.
T Consensus 105 -----~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 105 -----SASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp -----SSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred -----CCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 468999997543 12346788999999999999998543
No 222
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.42 E-value=3.6e-12 Score=92.89 Aligned_cols=107 Identities=15% Similarity=0.207 Sum_probs=79.2
Q ss_pred CCHHHHHHHHHHHh---hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCC
Q 029836 3 TSPDEAQFFSMLLK---LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGP 79 (187)
Q Consensus 3 ~~~~~~~~l~~l~~---~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d 79 (187)
+++...+.+..++. ..++.+|||+|||+|..+..++.. + ..+++++|+++.+++.++++++ +++++++|
T Consensus 32 ~~~~~~~~l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d 103 (200)
T 1ne2_A 32 TDASTAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLL-G-AESVTAFDIDPDAIETAKRNCG------GVNFMVAD 103 (200)
T ss_dssp CCHHHHHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHT-T-BSEEEEEESCHHHHHHHHHHCT------TSEEEECC
T ss_pred CCHHHHHHHHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHhcC------CCEEEECc
Confidence 33444444444443 236689999999999999999876 3 4689999999999999998774 78999999
Q ss_pred chHHHHHHhhcccCCCceeEEEEcCC-----CcccHHHHHHHHhcccCCeEEEEe
Q 029836 80 ALPLLDQLIQDEKYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 80 ~~~~l~~~~~~~~~~~~~D~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+.++ .++||+|+++++ ......+++.+.+.+ |+++++.
T Consensus 104 ~~~~----------~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~~ 146 (200)
T 1ne2_A 104 VSEI----------SGKYDTWIMNPPFGSVVKHSDRAFIDKAFETS--MWIYSIG 146 (200)
T ss_dssp GGGC----------CCCEEEEEECCCC-------CHHHHHHHHHHE--EEEEEEE
T ss_pred HHHC----------CCCeeEEEECCCchhccCchhHHHHHHHHHhc--CcEEEEE
Confidence 8763 358999999976 122457888888887 6655543
No 223
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.42 E-value=8.1e-13 Score=100.28 Aligned_cols=95 Identities=19% Similarity=0.130 Sum_probs=76.5
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCcee
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D 98 (187)
++.+|||+|||+|..+..+++. +.+++++|+++.+++.++++.. .+ ++++|+.+. + +. .++||
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~-----~~--~~~~d~~~~-~-~~-----~~~fD 116 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGV-----KN--VVEAKAEDL-P-FP-----SGAFE 116 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTC-----SC--EEECCTTSC-C-SC-----TTCEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcC-----CC--EEECcHHHC-C-CC-----CCCEE
Confidence 6789999999999999999875 4699999999999999988653 12 777887653 2 11 46899
Q ss_pred EEEEcCC----CcccHHHHHHHHhcccCCeEEEEeC
Q 029836 99 FVFVDAD----KDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 99 ~v~~d~~----~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
+|++... ..+...+++.+.+.|+|||.+++..
T Consensus 117 ~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 117 AVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp EEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEe
Confidence 9998653 3457889999999999999999754
No 224
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.41 E-value=2.8e-13 Score=102.59 Aligned_cols=110 Identities=16% Similarity=0.069 Sum_probs=82.0
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCC----------------------------
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGV---------------------------- 69 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~---------------------------- 69 (187)
.++.+|||+|||+|..+..++.... .+|+++|+++.+++.++++++..+.
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 3457999999999999988876521 4899999999999999998865421
Q ss_pred CCce-EEEeCCchHHHHHHhhcccCCCceeEEEEcCCC-----c--ccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 70 AHKI-DFREGPALPLLDQLIQDEKYHGTFDFVFVDADK-----D--NYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 70 ~~~i-~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~-----~--~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
..++ ++.++|..+..+.. .. ..++||+|++.... . ....+++.+.++|+|||++++.+..
T Consensus 133 ~~~v~~~~~~d~~~~~~~~-~~--~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLG-GV--SLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp HHHEEEEEECCTTSSSTTT-TC--CCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred hhhheeEEEeeeccCCCCC-cc--ccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 0127 89999987643211 00 02689999987542 2 5677899999999999999987644
No 225
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.38 E-value=2.5e-12 Score=97.85 Aligned_cols=96 Identities=21% Similarity=0.224 Sum_probs=77.2
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..+..+++.++ +.+++++|+++.+++.++++. .++.+..+|+.+. + + ..++|
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~-~-----~~~~f 149 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP-EITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRL-P-F-----SDTSM 149 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT-TSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSC-S-B-----CTTCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhC-C-C-----CCCce
Confidence 4578999999999999999998875 679999999999999988764 4688999988643 2 1 14689
Q ss_pred eEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 98 DFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 98 D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
|+|+..... ..++.+.++|+|||.+++...
T Consensus 150 D~v~~~~~~----~~l~~~~~~L~pgG~l~~~~~ 179 (269)
T 1p91_A 150 DAIIRIYAP----CKAEELARVVKPGGWVITATP 179 (269)
T ss_dssp EEEEEESCC----CCHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEEeCCh----hhHHHHHHhcCCCcEEEEEEc
Confidence 999975542 357888999999999988643
No 226
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=99.38 E-value=2.7e-11 Score=91.50 Aligned_cols=149 Identities=11% Similarity=0.019 Sum_probs=103.4
Q ss_pred cCCCEEEEEcccccHHHHHHHhh------CCCCCEEEEEe-----CCch-------------------HHHHHHHH----
Q 029836 18 INAKNTMEIGVFTGYSLLATALA------IPDDGKILALD-----ITKE-------------------HYEKGLPI---- 63 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~------~~~~~~v~~vd-----~~~~-------------------~~~~a~~~---- 63 (187)
.-|..|+|+|+..|.++..++.. .....+++++| +.+. ..+..++.
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 44779999999999999987652 12357899999 3321 01112222
Q ss_pred --HHHcCC-CCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCC-cccHHHHHHHHhcccCCeEEEEeCcCCCccccC
Q 029836 64 --IQKAGV-AHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADK-DNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVA 139 (187)
Q Consensus 64 --~~~~~~-~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~-~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~ 139 (187)
.+..+. .++++++.|++.+.++.+.++.. .+++|+|++|++. +.+...++.+.++|+|||+|++||+.+.+
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~-~~~~dlv~ID~D~Y~~t~~~le~~~p~l~~GGvIv~DD~~~~~---- 222 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVRETVPRYLAENP-QTVIALAYFDLDLYEPTKAVLEAIRPYLTKGSIVAFDELDNPK---- 222 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHHHHHHHHHHHCT-TCCEEEEEECCCCHHHHHHHHHHHGGGEEEEEEEEESSTTCTT----
T ss_pred hhhhhcCCCCCcEEEEEecHHHHHHHHHHhCC-CCceEEEEEcCcccchHHHHHHHHHHHhCCCcEEEEcCCCCCC----
Confidence 223455 38999999999999998754421 3479999999985 55677899999999999999999975321
Q ss_pred CCCCCchhhhhhHHHHHHHHHHHHhcCCCeeEEEeecCCeeEEEE
Q 029836 140 PPDADLDEHFLYLRDFVQELNKALAVDPRIEICQISIADGVTLCR 184 (187)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~G~~i~~ 184 (187)
+ . .+++..+.+..........+|+..+...++
T Consensus 223 --w-------~----G~~~A~~ef~~~~~~~i~~~p~~~~~~y~~ 254 (257)
T 3tos_A 223 --W-------P----GENIAMRKVLGLDHAPLRLLPGRPAPAYLR 254 (257)
T ss_dssp --C-------T----HHHHHHHHHTCTTSSCCEECTTCSCCEEEE
T ss_pred --C-------h----HHHHHHHHHHhhCCCeEEEccCCCCCEEEE
Confidence 1 1 233344444556677888889888776543
No 227
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.37 E-value=2.1e-13 Score=103.91 Aligned_cols=109 Identities=18% Similarity=0.040 Sum_probs=77.1
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCC----------------------------
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVA---------------------------- 70 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~---------------------------- 70 (187)
++.+|||||||+|..+..++... ..+|+++|+++.+++.|+++++.....
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~--~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDS--FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhh--hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 55799999999998766555431 247999999999999999987654210
Q ss_pred CceE-EEeCCchHHHHHHhhcccCCCceeEEEEcCC-------CcccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 71 HKID-FREGPALPLLDQLIQDEKYHGTFDFVFVDAD-------KDNYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 71 ~~i~-~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~-------~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
.+++ ++++|..+..+-. .. ..++||+|+.... .+++...+..+.++|||||.+++.+..
T Consensus 133 ~~i~~~~~~D~~~~~~~~-~~--~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLA-PA--VLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp HHEEEEEECCTTSSSTTT-TC--CCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred hhhheEEeccccCCCCCC-cc--ccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 1243 7788876532200 00 0468999998643 134567889999999999999998654
No 228
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.37 E-value=4.1e-12 Score=92.49 Aligned_cols=99 Identities=15% Similarity=0.166 Sum_probs=71.2
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCC-CCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHH------------
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPD-DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL------------ 84 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~-~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l------------ 84 (187)
.+..+|||+|||+|.++..+++.+++ .++|+++|+++.. .. ++++++++|+.+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~-~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PI-PNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC-TTCEEEECCTTTTSSCCC--------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CC-CCceEEEccccchhhhhhcccccccc
Confidence 45679999999999999999988763 5899999999842 12 57889999886532
Q ss_pred -------HHHhhcccCCCceeEEEEcCCCcc-------c-------HHHHHHHHhcccCCeEEEEe
Q 029836 85 -------DQLIQDEKYHGTFDFVFVDADKDN-------Y-------VNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 85 -------~~~~~~~~~~~~~D~v~~d~~~~~-------~-------~~~~~~~~~~L~~gG~lv~~ 129 (187)
+.+... ...++||+|+++..... . ...++.+.++|+|||.+++.
T Consensus 89 ~~~~~~~~~~~~~-~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 153 (201)
T 2plw_A 89 MNNNSVDYKLKEI-LQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVK 153 (201)
T ss_dssp ---CHHHHHHHHH-HTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccchhhHHHHHhh-cCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 010000 01468999999864211 1 13677889999999999974
No 229
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=99.36 E-value=3.2e-12 Score=101.15 Aligned_cols=107 Identities=13% Similarity=0.132 Sum_probs=85.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcC---C----CCceEEEeCCchHHHHHHhhc
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAG---V----AHKIDFREGPALPLLDQLIQD 90 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~---~----~~~i~~~~~d~~~~l~~~~~~ 90 (187)
.+|++||-||.|.|..+.++++. + ..+++.||+++..++.+++.+.... . .++++++.+|+.+++....++
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh-~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~ 281 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 281 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHhc-C-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhc
Confidence 35789999999999999999986 4 4799999999999999999875321 1 146899999999998765433
Q ss_pred ccCCCceeEEEEcCCC-------------cccHHHHHHHHhcccCCeEEEEe
Q 029836 91 EKYHGTFDFVFVDADK-------------DNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 91 ~~~~~~~D~v~~d~~~-------------~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
.++||+|++|... ....++++.+.+.|+|||+++..
T Consensus 282 ---~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 282 ---GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp ---TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ---cCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 4689999999531 11257889999999999999863
No 230
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.36 E-value=3.4e-12 Score=96.86 Aligned_cols=108 Identities=19% Similarity=0.144 Sum_probs=79.6
Q ss_pred CCCEEEEEcccccHHHHHHHhh-------CCC----CCEEEEEeCCc--------------hHHHHHHHHHHHcC-----
Q 029836 19 NAKNTMEIGVFTGYSLLATALA-------IPD----DGKILALDITK--------------EHYEKGLPIIQKAG----- 68 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~-------~~~----~~~v~~vd~~~--------------~~~~~a~~~~~~~~----- 68 (187)
++.+|||||+|+|++++.+++. .|. ..+++++|..| +....++++++...
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4469999999999999987765 342 25899999987 34446777766521
Q ss_pred -----CC---CceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCCc------ccHHHHHHHHhcccCCeEEEE
Q 029836 69 -----VA---HKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKD------NYVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 69 -----~~---~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~~------~~~~~~~~~~~~L~~gG~lv~ 128 (187)
+. .+++++.+|+.+.++.+.... ...||+||+|+... -..++|+.+.++|+|||+++.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~--~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSL--NQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGG--TTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhccccc--CCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 11 467899999999887652110 13799999998521 157899999999999999984
No 231
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.35 E-value=3.3e-12 Score=100.86 Aligned_cols=116 Identities=13% Similarity=0.037 Sum_probs=89.1
Q ss_pred CHHHHHHHHHHHh----hcCCCEEEEEcccccHHHHHHHhhCCCC----CEEEEEeCCchHHHHHHHHHHHcCCCCceEE
Q 029836 4 SPDEAQFFSMLLK----LINAKNTMEIGVFTGYSLLATALAIPDD----GKILALDITKEHYEKGLPIIQKAGVAHKIDF 75 (187)
Q Consensus 4 ~~~~~~~l~~l~~----~~~~~~vLeiG~g~G~~~~~l~~~~~~~----~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~ 75 (187)
+.....++..++. ..++.+|||+|||+|..+..+++.++.. .+++++|+++.+++.|+.++...+. ++.+
T Consensus 111 P~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i 188 (344)
T 2f8l_A 111 PDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTL 188 (344)
T ss_dssp CHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEE
T ss_pred hHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceE
Confidence 3445555555543 2245799999999999999998876532 7899999999999999999998876 6889
Q ss_pred EeCCchHHHHHHhhcccCCCceeEEEEcCCCcc---------------------cHHHHHHHHhcccCCeEEEEe
Q 029836 76 REGPALPLLDQLIQDEKYHGTFDFVFVDADKDN---------------------YVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 76 ~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~~~---------------------~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+++|+....+ .++||+|+.+++... ...+++.+.+.|+|||++++.
T Consensus 189 ~~~D~l~~~~--------~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v 255 (344)
T 2f8l_A 189 LHQDGLANLL--------VDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFL 255 (344)
T ss_dssp EESCTTSCCC--------CCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEE
T ss_pred EECCCCCccc--------cCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEE
Confidence 9999875321 468999999976110 125789999999999988763
No 232
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.35 E-value=2.9e-12 Score=98.69 Aligned_cols=111 Identities=11% Similarity=-0.030 Sum_probs=75.4
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcC-----------------CC-----------
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAG-----------------VA----------- 70 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~-----------------~~----------- 70 (187)
++.+|||||||+|.....++.. + ..+|+++|+++.+++.|+++++... ..
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACS-H-FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGG-G-CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhcc-C-CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 5689999999999954433332 2 4699999999999999988664321 00
Q ss_pred -CceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCC-------cccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 71 -HKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADK-------DNYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 71 -~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~-------~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
..++++++|+.+.++-- +.....++||+|++...- .+...+++.+.++|||||++++.+..
T Consensus 149 ~~~~~~~~~D~~~~~~~~-~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~ 217 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLG-AGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGAL 217 (289)
T ss_dssp HHEEEEECCCTTSSSTTC-SSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred hhhceEEecccCCCCCcc-ccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 01456777776532210 000003569999987651 24678899999999999999987543
No 233
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.34 E-value=9.6e-12 Score=93.61 Aligned_cols=154 Identities=10% Similarity=-0.025 Sum_probs=102.3
Q ss_pred HHHHHHHhh-cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHH
Q 029836 9 QFFSMLLKL-INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQL 87 (187)
Q Consensus 9 ~~l~~l~~~-~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~ 87 (187)
.|...+... ..|.+|||||||.|-++..++...+ ..+++++|+++.+++.+++++..+|. +.++.+.|.....+
T Consensus 121 ~fY~~i~~~i~~p~~VLDLGCG~GpLAl~~~~~~p-~a~y~a~DId~~~le~a~~~l~~~g~--~~~~~v~D~~~~~p-- 195 (281)
T 3lcv_B 121 EFYRELFRHLPRPNTLRDLACGLNPLAAPWMGLPA-ETVYIASDIDARLVGFVDEALTRLNV--PHRTNVADLLEDRL-- 195 (281)
T ss_dssp HHHHHHGGGSCCCSEEEETTCTTGGGCCTTTTCCT-TCEEEEEESBHHHHHHHHHHHHHTTC--CEEEEECCTTTSCC--
T ss_pred HHHHHHHhccCCCceeeeeccCccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeeecccCC--
Confidence 333334433 4588999999999999999887654 79999999999999999999999987 37788887764433
Q ss_pred hhcccCCCceeEEEEcCC-----CcccHHHHHHHHhcccCCeEEEEeCcCCCccccCCCCCCchhhhhhHHHHHHHHHHH
Q 029836 88 IQDEKYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNTLWGGSVVAPPDADLDEHFLYLRDFVQELNKA 162 (187)
Q Consensus 88 ~~~~~~~~~~D~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (187)
.++||++++.-. .+.....+ .+...|+++|++|--+.- .+.. ....+.....+..+.
T Consensus 196 ------~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~k---sl~G--------rs~gm~~~Y~~~~e~ 257 (281)
T 3lcv_B 196 ------DEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPTK---SLGQ--------RSKGMFQNYSQSFES 257 (281)
T ss_dssp ------CSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEECC------------------CHHHHHHHHHHH
T ss_pred ------CCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccch---hhcC--------CCcchhhHHHHHHHH
Confidence 578999988644 12222344 678899999999854331 1111 112333333444334
Q ss_pred HhcCCCeeEEEeecCCeeEEEEE
Q 029836 163 LAVDPRIEICQISIADGVTLCRR 185 (187)
Q Consensus 163 ~~~~~~~~~~~~p~~~G~~i~~k 185 (187)
...+.++....+-+++-+..+.+
T Consensus 258 ~~~~~g~~~~~~~~~nEl~y~i~ 280 (281)
T 3lcv_B 258 QARERSCRIQRLEIGNELIYVIQ 280 (281)
T ss_dssp HHHHHTCCEEEEEETTEEEEEEC
T ss_pred HHHhcCCceeeeeecCeeEEEec
Confidence 33334556666777777666554
No 234
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.34 E-value=3.8e-12 Score=94.15 Aligned_cols=102 Identities=20% Similarity=0.185 Sum_probs=79.3
Q ss_pred HHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHh
Q 029836 9 QFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (187)
Q Consensus 9 ~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~ 88 (187)
..+..+....++.+|||+|||+|..+..++.. +++|+++.+++.++++ +++++++|..+. + .
T Consensus 37 ~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~-~-~- 98 (219)
T 1vlm_A 37 SELQAVKCLLPEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR--------GVFVLKGTAENL-P-L- 98 (219)
T ss_dssp HHHHHHHHHCCSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT--------TCEEEECBTTBC-C-S-
T ss_pred HHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc--------CCEEEEcccccC-C-C-
Confidence 33444555566889999999999998877642 9999999999988875 578888887543 2 1
Q ss_pred hcccCCCceeEEEEcCC---CcccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 89 QDEKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 89 ~~~~~~~~~D~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
..++||+|++... ..+...+++.+.+.|+|||.+++....
T Consensus 99 ----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 99 ----KDESFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp ----CTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ----CCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeC
Confidence 0468999998765 345678999999999999999987543
No 235
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.33 E-value=1e-11 Score=90.30 Aligned_cols=97 Identities=15% Similarity=0.134 Sum_probs=69.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH--HHHHhhccc--C
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDEK--Y 93 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--l~~~~~~~~--~ 93 (187)
.++.+|||+|||+|.++..+++. .++|+++|+++.. .. ++++++++|+.+. ...+..... .
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~-----------~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~ 88 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME-----------EI-AGVRFIRCDIFKETIFDDIDRALREEG 88 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC-----------CC-TTCEEEECCTTSSSHHHHHHHHHHHHT
T ss_pred CCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc-----------cC-CCeEEEEccccCHHHHHHHHHHhhccc
Confidence 45689999999999999999876 5899999999852 12 5899999998652 111110000 0
Q ss_pred CCceeEEEEcCCCcc--------------cHHHHHHHHhcccCCeEEEEe
Q 029836 94 HGTFDFVFVDADKDN--------------YVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 94 ~~~~D~v~~d~~~~~--------------~~~~~~~~~~~L~~gG~lv~~ 129 (187)
.++||+|+.|+.+.. ....++.+.++|||||.+++.
T Consensus 89 ~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k 138 (191)
T 3dou_A 89 IEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLK 138 (191)
T ss_dssp CSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 148999999974210 135677788999999999974
No 236
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.33 E-value=1.3e-11 Score=94.09 Aligned_cols=113 Identities=17% Similarity=0.172 Sum_probs=78.5
Q ss_pred cCCCEEEEEcccc--cHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 18 INAKNTMEIGVFT--GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 18 ~~~~~vLeiG~g~--G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
....++||||||. +..+..++....++++|+++|.|+.+++.|++.+...+ ..+++++++|..+.-..+.... ..+
T Consensus 77 ~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~v~aD~~~~~~~l~~~~-~~~ 154 (277)
T 3giw_A 77 AGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAYVEADMLDPASILDAPE-LRD 154 (277)
T ss_dssp SCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEEEECCTTCHHHHHTCHH-HHT
T ss_pred cCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEEEEecccChhhhhcccc-ccc
Confidence 4557999999997 44556666544347999999999999999999886543 2579999999977522110000 012
Q ss_pred cee-----EEEEcCC----Cc--ccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 96 TFD-----FVFVDAD----KD--NYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 96 ~~D-----~v~~d~~----~~--~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
.|| .|++... .. .....+..+.+.|+|||+|++.+..
T Consensus 155 ~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~ 202 (277)
T 3giw_A 155 TLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGT 202 (277)
T ss_dssp TCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEEC
T ss_pred ccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEecc
Confidence 344 3555443 12 1367899999999999999997654
No 237
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.33 E-value=8.9e-12 Score=96.04 Aligned_cols=90 Identities=19% Similarity=0.120 Sum_probs=71.3
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 83 (187)
.+...+.+-..+...++.+|||||||+|..+..+++. ..+|+++|+++.+++.+++++...+..++++++++|+.+.
T Consensus 13 d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~ 89 (285)
T 1zq9_A 13 NPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK---AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT 89 (285)
T ss_dssp CHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH---SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh---CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc
Confidence 3444444444444556789999999999999999987 4699999999999999999987766656899999999754
Q ss_pred HHHHhhcccCCCceeEEEEcCC
Q 029836 84 LDQLIQDEKYHGTFDFVFVDAD 105 (187)
Q Consensus 84 l~~~~~~~~~~~~~D~v~~d~~ 105 (187)
+ ..+||+|+.+.+
T Consensus 90 -~--------~~~fD~vv~nlp 102 (285)
T 1zq9_A 90 -D--------LPFFDTCVANLP 102 (285)
T ss_dssp -C--------CCCCSEEEEECC
T ss_pred -c--------chhhcEEEEecC
Confidence 1 347999999765
No 238
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.33 E-value=1.9e-12 Score=104.67 Aligned_cols=100 Identities=16% Similarity=0.185 Sum_probs=73.6
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCcee
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D 98 (187)
++.+|||||||+|..+..+++. +.+++++|+++.+++.|+++ +......++..+..+.++.. +++||
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~~------~~~fD 173 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRRT------EGPAN 173 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHHH------HCCEE
T ss_pred CCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcccC------CCCEE
Confidence 5679999999999999999875 46999999999999988765 33211112221222222211 46899
Q ss_pred EEEEcCC---CcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 99 FVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 99 ~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
+|++... ..+...+++.+.++|||||++++...
T Consensus 174 ~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 174 VIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp EEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 9998765 34678899999999999999998643
No 239
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.31 E-value=3.3e-12 Score=94.53 Aligned_cols=98 Identities=15% Similarity=0.062 Sum_probs=76.7
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.++.+|||+|||+|..+..+++. +.+++++|+++.+++.++++. .++.++|..+....+. +++|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~-----~~~f 94 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN---GTRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPYE-----EEQF 94 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT---TCEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCSC-----TTCE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCCC-----CCcc
Confidence 36789999999999999999876 379999999999998887643 2678888764311111 4689
Q ss_pred eEEEEcCC---CcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 98 DFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 98 D~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
|+|++... ..+...+++.+.+.|+|||.+++...
T Consensus 95 D~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 131 (230)
T 3cc8_A 95 DCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIP 131 (230)
T ss_dssp EEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEE
T ss_pred CEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 99998764 33457889999999999999998643
No 240
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.30 E-value=2.1e-11 Score=88.33 Aligned_cols=100 Identities=10% Similarity=0.123 Sum_probs=71.7
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCC--------CEEEEEeCCchHHHHHHHHHHHcCCCCceEEE-eCCchHHHH--H
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDD--------GKILALDITKEHYEKGLPIIQKAGVAHKIDFR-EGPALPLLD--Q 86 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~--------~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~-~~d~~~~l~--~ 86 (187)
.++.+|||+|||+|.++..+++.++.. .+|+++|+++.. .. .+++++ ++|..+... .
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-EGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-TTCEEECSCCTTSHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-CCCeEEEeccCCCHHHHHH
Confidence 456899999999999999999987633 799999999842 12 578888 888754311 1
Q ss_pred HhhcccCCCceeEEEEcCCCc-------cc-------HHHHHHHHhcccCCeEEEEeC
Q 029836 87 LIQDEKYHGTFDFVFVDADKD-------NY-------VNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 87 ~~~~~~~~~~~D~v~~d~~~~-------~~-------~~~~~~~~~~L~~gG~lv~~~ 130 (187)
..... ..++||+|+++.... +. ..+++.+.++|+|||.+++..
T Consensus 89 ~~~~~-~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 89 ILEVL-PGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp HHHHS-GGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhc-CCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 10000 034899999876311 11 367888999999999999864
No 241
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.30 E-value=1.3e-12 Score=97.87 Aligned_cols=99 Identities=16% Similarity=0.073 Sum_probs=67.1
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeC-CchHHHHHHhhcccCCCce
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREG-PALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~-d~~~~l~~~~~~~~~~~~~ 97 (187)
++++|||||||+|..+..+++. + ..+|+++|+++.+++.++++. +++..... +......... ....+
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~-g-~~~V~gvDis~~ml~~a~~~~------~~~~~~~~~~~~~~~~~~~----~~~~~ 104 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN-G-AKLVYALDVGTNQLAWKIRSD------ERVVVMEQFNFRNAVLADF----EQGRP 104 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSCCCCCHHHHTC------TTEEEECSCCGGGCCGGGC----CSCCC
T ss_pred CCCEEEEEccCCCHHHHHHHhc-C-CCEEEEEcCCHHHHHHHHHhC------ccccccccceEEEeCHhHc----CcCCC
Confidence 4569999999999999999986 2 359999999999998876643 23332221 2211110100 01135
Q ss_pred eEEEEcCCCcccHHHHHHHHhcccCCeEEEEe
Q 029836 98 DFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 98 D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
|.+.+|........++..+.++|||||.+++.
T Consensus 105 d~~~~D~v~~~l~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 105 SFTSIDVSFISLDLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp SEEEECCSSSCGGGTHHHHHHHSCTTCEEEEE
T ss_pred CEEEEEEEhhhHHHHHHHHHHhccCCCEEEEE
Confidence 66666655444578899999999999999873
No 242
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.30 E-value=5.8e-12 Score=96.96 Aligned_cols=99 Identities=14% Similarity=0.003 Sum_probs=71.8
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEE-eCCchHHHHHHhhcccCCCce
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFR-EGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~-~~d~~~~l~~~~~~~~~~~~~ 97 (187)
++++|||+|||+|.++..+++. + ..+|+++|+++.+++.+.++ .+++... ..+.....+... ...+|
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~-g-a~~V~aVDvs~~mL~~a~r~------~~rv~~~~~~ni~~l~~~~l----~~~~f 152 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN-G-AKLVYAVDVGTNQLVWKLRQ------DDRVRSMEQYNFRYAEPVDF----TEGLP 152 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSSSCSCHHHHT------CTTEEEECSCCGGGCCGGGC----TTCCC
T ss_pred cccEEEecCCCccHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHh------CcccceecccCceecchhhC----CCCCC
Confidence 4579999999999999999876 2 47999999999999874331 1344433 234432211110 02359
Q ss_pred eEEEEcCCCcccHHHHHHHHhcccCCeEEEEe
Q 029836 98 DFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 98 D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
|+|++|.........+..+.++|+|||.+++-
T Consensus 153 D~v~~d~sf~sl~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 153 SFASIDVSFISLNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp SEEEECCSSSCGGGTHHHHHHHSCTTCEEEEE
T ss_pred CEEEEEeeHhhHHHHHHHHHHHcCcCCEEEEE
Confidence 99999987667788999999999999999874
No 243
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.30 E-value=3.3e-12 Score=97.10 Aligned_cols=91 Identities=14% Similarity=0.182 Sum_probs=73.6
Q ss_pred HHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCc-------hHHHHHHHHHHHcCCCCceEEEeCCch
Q 029836 9 QFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITK-------EHYEKGLPIIQKAGVAHKIDFREGPAL 81 (187)
Q Consensus 9 ~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~-------~~~~~a~~~~~~~~~~~~i~~~~~d~~ 81 (187)
.++...+...++.+|||+|||+|..++.++.. +++|+++|+++ .+++.|+++.+.+++.++++++++|+.
T Consensus 73 ~~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~ 149 (258)
T 2r6z_A 73 ELIAKAVNHTAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAA 149 (258)
T ss_dssp CHHHHHTTGGGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHH
T ss_pred HHHHHHhCcCCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHH
Confidence 44444445555689999999999999999985 46899999999 999999999888777567999999999
Q ss_pred HHHHHHhhcccCCCceeEEEEcCC
Q 029836 82 PLLDQLIQDEKYHGTFDFVFVDAD 105 (187)
Q Consensus 82 ~~l~~~~~~~~~~~~~D~v~~d~~ 105 (187)
++++.+.+. .++||+|++|+.
T Consensus 150 ~~l~~~~~~---~~~fD~V~~dP~ 170 (258)
T 2r6z_A 150 EQMPALVKT---QGKPDIVYLDPM 170 (258)
T ss_dssp HHHHHHHHH---HCCCSEEEECCC
T ss_pred HHHHhhhcc---CCCccEEEECCC
Confidence 887765311 158999999975
No 244
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.29 E-value=1.4e-11 Score=95.49 Aligned_cols=90 Identities=18% Similarity=0.199 Sum_probs=68.9
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 83 (187)
++...+.+...+...++.+|||||||+|..+..+++. ..+|+++|+++.+++.+++++...+. ++++++++|+.+.
T Consensus 27 ~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~ 102 (299)
T 2h1r_A 27 NPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKT 102 (299)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSS
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhC
Confidence 4455555555555567789999999999999999875 47999999999999999999987776 6899999998754
Q ss_pred HHHHhhcccCCCceeEEEEcCCC
Q 029836 84 LDQLIQDEKYHGTFDFVFVDADK 106 (187)
Q Consensus 84 l~~~~~~~~~~~~~D~v~~d~~~ 106 (187)
. .++||+|+++.+.
T Consensus 103 ~---------~~~~D~Vv~n~py 116 (299)
T 2h1r_A 103 V---------FPKFDVCTANIPY 116 (299)
T ss_dssp C---------CCCCSEEEEECCG
T ss_pred C---------cccCCEEEEcCCc
Confidence 1 3479999998763
No 245
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.28 E-value=1.6e-10 Score=86.15 Aligned_cols=149 Identities=9% Similarity=-0.010 Sum_probs=97.1
Q ss_pred HHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhh
Q 029836 10 FFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQ 89 (187)
Q Consensus 10 ~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~ 89 (187)
+...+.....|.+|||+|||+|..+..+. + ..+++++|+++.+++.+++++...+ .+.++.++|.....+
T Consensus 96 fY~~i~~~~~p~~VLDlGCG~gpLal~~~---~-~~~y~a~DId~~~i~~ar~~~~~~g--~~~~~~v~D~~~~~~---- 165 (253)
T 3frh_A 96 LYDFIFSAETPRRVLDIACGLNPLALYER---G-IASVWGCDIHQGLGDVITPFAREKD--WDFTFALQDVLCAPP---- 165 (253)
T ss_dssp HHHHHTSSCCCSEEEEETCTTTHHHHHHT---T-CSEEEEEESBHHHHHHHHHHHHHTT--CEEEEEECCTTTSCC----
T ss_pred HHHHHhcCCCCCeEEEecCCccHHHHHhc---c-CCeEEEEeCCHHHHHHHHHHHHhcC--CCceEEEeecccCCC----
Confidence 33334444568899999999999988777 3 7899999999999999999998877 478888888865433
Q ss_pred cccCCCceeEEEEcCC-----CcccHHHHHHHHhcccCCeEEEEeCcCC-CccccCCCCCCchhhhhhHHHHH-HHHHHH
Q 029836 90 DEKYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNTLW-GGSVVAPPDADLDEHFLYLRDFV-QELNKA 162 (187)
Q Consensus 90 ~~~~~~~~D~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 162 (187)
.++||+|++--. .+.....+ .+...|++++++|--++-. .|.- ..+.... ..|.+.
T Consensus 166 ----~~~~DvvLllk~lh~LE~q~~~~~~-~ll~aL~~~~vvVsfPtksl~Gr~------------~gm~~~Y~~~~e~~ 228 (253)
T 3frh_A 166 ----AEAGDLALIFKLLPLLEREQAGSAM-ALLQSLNTPRMAVSFPTRSLGGRG------------KGMEANYAAWFEGG 228 (253)
T ss_dssp ----CCBCSEEEEESCHHHHHHHSTTHHH-HHHHHCBCSEEEEEEECC-----------------------CHHHHHHHH
T ss_pred ----CCCcchHHHHHHHHHhhhhchhhHH-HHHHHhcCCCEEEEcChHHhcCCC------------cchhhHHHHHHHHH
Confidence 568999987632 12222333 6667999999998544211 1110 1111222 233333
Q ss_pred HhcCCCeeEEEeecCCeeEEEEEc
Q 029836 163 LAVDPRIEICQISIADGVTLCRRI 186 (187)
Q Consensus 163 ~~~~~~~~~~~~p~~~G~~i~~k~ 186 (187)
+ ....+..-.+-+++-+....++
T Consensus 229 ~-~~~~~~~~~~~~~nEl~~~i~~ 251 (253)
T 3frh_A 229 L-PAEFEIEDKKTIGTELIYLIKK 251 (253)
T ss_dssp S-CTTEEEEEEEEETTEEEEEEEE
T ss_pred h-hccchhhhheecCceEEEEEec
Confidence 4 3444555566788887776665
No 246
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.27 E-value=3.9e-12 Score=100.60 Aligned_cols=104 Identities=15% Similarity=0.057 Sum_probs=79.1
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.+..+|||||||+|..+..+++.++ +.+++++|+ +..+. +++.+..+..++++++.+|+.+.+ . +|
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~~---------p-~~ 248 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHP-GLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLREV---------P-HA 248 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCT-TEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTCC---------C-CC
T ss_pred cCCceEEEECCccCHHHHHHHHHCC-CCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCCC---------C-CC
Confidence 3467999999999999999999887 689999999 44443 333444455578999999986321 3 79
Q ss_pred eEEEEcCCC-----cccHHHHHHHHhcccCCeEEEEeCcCCCc
Q 029836 98 DFVFVDADK-----DNYVNYHKRLIELVKVGGVIGYDNTLWGG 135 (187)
Q Consensus 98 D~v~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~~~ 135 (187)
|+|++...- .....+++++.+.|||||.+++.+.....
T Consensus 249 D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~ 291 (348)
T 3lst_A 249 DVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPE 291 (348)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCS
T ss_pred cEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 999986541 22368899999999999999987765543
No 247
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.27 E-value=1.2e-11 Score=98.55 Aligned_cols=97 Identities=10% Similarity=0.091 Sum_probs=77.0
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCcee
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D 98 (187)
+..+|||||||+|..+..+++.+| ..+++++|+ +.+++.+++ .++++++.+|+.+.++ .. |
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~~~p---------~~-D 263 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYP-SINAINFDL-PHVIQDAPA-------FSGVEHLGGDMFDGVP---------KG-D 263 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC-------CTTEEEEECCTTTCCC---------CC-S
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeh-HHHHHhhhh-------cCCCEEEecCCCCCCC---------CC-C
Confidence 457999999999999999999987 689999999 887766543 2589999999875322 23 9
Q ss_pred EEEEcCCC-----cccHHHHHHHHhcccCCeEEEEeCcCCC
Q 029836 99 FVFVDADK-----DNYVNYHKRLIELVKVGGVIGYDNTLWG 134 (187)
Q Consensus 99 ~v~~d~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
+|++...- +....+++++.+.|+|||.+++.+....
T Consensus 264 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 264 AIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp EEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred EEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 99886541 2345789999999999999998877654
No 248
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.27 E-value=3.2e-11 Score=88.71 Aligned_cols=95 Identities=9% Similarity=0.052 Sum_probs=72.3
Q ss_pred HHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHh
Q 029836 9 QFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLI 88 (187)
Q Consensus 9 ~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~ 88 (187)
.++..+....++.+|||+|||+|..+..++ .+++++|+++. ++++.++|..+. + +
T Consensus 57 ~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~----------------~~~~~~~d~~~~-~-~- 111 (215)
T 2zfu_A 57 RIARDLRQRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL----------------DPRVTVCDMAQV-P-L- 111 (215)
T ss_dssp HHHHHHHTSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS----------------STTEEESCTTSC-S-C-
T ss_pred HHHHHHhccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC----------------CceEEEeccccC-C-C-
Confidence 455555555567899999999999887662 57999999986 456778887652 1 1
Q ss_pred hcccCCCceeEEEEcCC--CcccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 89 QDEKYHGTFDFVFVDAD--KDNYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 89 ~~~~~~~~~D~v~~d~~--~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
..++||+|++... ..+...+++.+.++|+|||.+++.+..
T Consensus 112 ----~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 153 (215)
T 2zfu_A 112 ----EDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVS 153 (215)
T ss_dssp ----CTTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred ----CCCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEEcC
Confidence 1468999998754 356688999999999999999987543
No 249
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.26 E-value=2.1e-11 Score=97.90 Aligned_cols=115 Identities=14% Similarity=0.064 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCC-------------------------------------CCEE
Q 029836 5 PDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPD-------------------------------------DGKI 47 (187)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~-------------------------------------~~~v 47 (187)
+.....+-.++...+...+||.+||+|.++++++..... ..+|
T Consensus 187 e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 266 (393)
T 3k0b_A 187 ETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNI 266 (393)
T ss_dssp HHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceE
Confidence 334444444444556779999999999999887754321 1569
Q ss_pred EEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCC-------cccHHHHHHHHhcc
Q 029836 48 LALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADK-------DNYVNYHKRLIELV 120 (187)
Q Consensus 48 ~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~-------~~~~~~~~~~~~~L 120 (187)
+++|+++.+++.|++|+..+|+.+++++.++|+.+... .++||+|+++++. .....++..+.+.|
T Consensus 267 ~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~--------~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~l 338 (393)
T 3k0b_A 267 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT--------EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVY 338 (393)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC--------CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCC--------CCCCCEEEECCCCccccCCchhHHHHHHHHHHHH
Confidence 99999999999999999999998889999999976532 4589999999873 22334555555555
Q ss_pred cC--CeEEE
Q 029836 121 KV--GGVIG 127 (187)
Q Consensus 121 ~~--gG~lv 127 (187)
++ |+.+.
T Consensus 339 k~~~g~~~~ 347 (393)
T 3k0b_A 339 KRMPTWSVY 347 (393)
T ss_dssp HTCTTCEEE
T ss_pred hcCCCCEEE
Confidence 54 66554
No 250
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.26 E-value=1.5e-11 Score=99.34 Aligned_cols=107 Identities=17% Similarity=0.199 Sum_probs=80.8
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 83 (187)
.+...+++..++...++.+|||+|||+|..+..+++..+...+++++|+++.+++.| .+++++++|..+.
T Consensus 24 P~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~~~ 93 (421)
T 2ih2_A 24 PPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADFLLW 93 (421)
T ss_dssp CHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCGGGC
T ss_pred CHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCChhhc
Confidence 344455555554434567999999999999999998753368999999999998766 4789999998765
Q ss_pred HHHHhhcccCCCceeEEEEcCCC---cc-----------------------------cHHHHHHHHhcccCCeEEEE
Q 029836 84 LDQLIQDEKYHGTFDFVFVDADK---DN-----------------------------YVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 84 l~~~~~~~~~~~~~D~v~~d~~~---~~-----------------------------~~~~~~~~~~~L~~gG~lv~ 128 (187)
.+ .++||+|+.+++. .. +..+++.+.++|++||.+++
T Consensus 94 ~~--------~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~ 162 (421)
T 2ih2_A 94 EP--------GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVF 162 (421)
T ss_dssp CC--------SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEE
T ss_pred Cc--------cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEE
Confidence 32 4689999997651 11 12568888999999998876
No 251
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.26 E-value=1.2e-11 Score=99.29 Aligned_cols=77 Identities=12% Similarity=0.102 Sum_probs=67.9
Q ss_pred CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHc--CCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 20 AKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKA--GVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~--~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
+.+|||+|||+|..++.+++. +.+|+++|+++.+++.|++|++.+ |+ ++++++++|+.++++... .++|
T Consensus 94 g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~-----~~~f 164 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIK-----TFHP 164 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHH-----HHCC
T ss_pred CCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhcc-----CCCc
Confidence 689999999999999998875 479999999999999999999988 77 789999999998766532 3589
Q ss_pred eEEEEcCC
Q 029836 98 DFVFVDAD 105 (187)
Q Consensus 98 D~v~~d~~ 105 (187)
|+||+|++
T Consensus 165 DvV~lDPP 172 (410)
T 3ll7_A 165 DYIYVDPA 172 (410)
T ss_dssp SEEEECCE
T ss_pred eEEEECCC
Confidence 99999975
No 252
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.25 E-value=1e-11 Score=95.12 Aligned_cols=104 Identities=24% Similarity=0.281 Sum_probs=75.7
Q ss_pred CCCEEEEEcccccH----HHHHHHhhCCC---CCEEEEEeCCchHHHHHHHHHHH-----------------------cC
Q 029836 19 NAKNTMEIGVFTGY----SLLATALAIPD---DGKILALDITKEHYEKGLPIIQK-----------------------AG 68 (187)
Q Consensus 19 ~~~~vLeiG~g~G~----~~~~l~~~~~~---~~~v~~vd~~~~~~~~a~~~~~~-----------------------~~ 68 (187)
++.+|+|+|||+|. ++..+++.++. +.+|+++|+|+.+++.|+++... .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45699999999998 44555655442 35899999999999999986410 00
Q ss_pred -------CCCceEEEeCCchHH-HHHHhhcccCCCceeEEEEcCC-----CcccHHHHHHHHhcccCCeEEEEe
Q 029836 69 -------VAHKIDFREGPALPL-LDQLIQDEKYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 69 -------~~~~i~~~~~d~~~~-l~~~~~~~~~~~~~D~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+..+++|.++|..+. ++ . .++||+|++... .+.....++.+.+.|+|||+|++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~-~------~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYN-V------PGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCC-C------CCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCC-c------CCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 013689999998752 11 0 358999999654 223467899999999999999973
No 253
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.25 E-value=1.5e-11 Score=98.51 Aligned_cols=111 Identities=19% Similarity=0.141 Sum_probs=82.0
Q ss_pred HHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCC-------------------------------------CCCEEEEEe
Q 029836 9 QFFSMLLKLINAKNTMEIGVFTGYSLLATALAIP-------------------------------------DDGKILALD 51 (187)
Q Consensus 9 ~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~-------------------------------------~~~~v~~vd 51 (187)
..+-.++...+...+||.+||+|..+++++.... ...+|+++|
T Consensus 185 a~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvD 264 (385)
T 3ldu_A 185 AGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYD 264 (385)
T ss_dssp HHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEE
T ss_pred HHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEE
Confidence 3333333445567999999999999999876532 115799999
Q ss_pred CCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCC-------cccHHHHHHHHhcccC--
Q 029836 52 ITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADK-------DNYVNYHKRLIELVKV-- 122 (187)
Q Consensus 52 ~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~-------~~~~~~~~~~~~~L~~-- 122 (187)
+++.+++.|++|+..+++.+++++.++|+.+... .++||+|+++++. .....++..+.+.|++
T Consensus 265 id~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~--------~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~ 336 (385)
T 3ldu_A 265 IDEESIDIARENAEIAGVDEYIEFNVGDATQFKS--------EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLK 336 (385)
T ss_dssp SCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCC--------SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSB
T ss_pred CCHHHHHHHHHHHHHcCCCCceEEEECChhhcCc--------CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCC
Confidence 9999999999999999997789999999987532 4589999999873 2234455555555554
Q ss_pred CeEEE
Q 029836 123 GGVIG 127 (187)
Q Consensus 123 gG~lv 127 (187)
|+.+.
T Consensus 337 g~~~~ 341 (385)
T 3ldu_A 337 NWSYY 341 (385)
T ss_dssp SCEEE
T ss_pred CCEEE
Confidence 65444
No 254
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.25 E-value=3.7e-11 Score=96.16 Aligned_cols=115 Identities=9% Similarity=-0.023 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCC-------------------------------------CCEE
Q 029836 5 PDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPD-------------------------------------DGKI 47 (187)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~-------------------------------------~~~v 47 (187)
+.....+-.++...+...+||.+||+|.+.++.+..... ..++
T Consensus 180 e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v 259 (384)
T 3ldg_A 180 ENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDI 259 (384)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceE
Confidence 344444444445556779999999999999987754321 1469
Q ss_pred EEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCC-------cccHHHHHHHHhcc
Q 029836 48 LALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADK-------DNYVNYHKRLIELV 120 (187)
Q Consensus 48 ~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~-------~~~~~~~~~~~~~L 120 (187)
+++|+++.+++.|++|++.+|+.+++++.++|+.+... .++||+|+++++. .....++..+.+.|
T Consensus 260 ~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~--------~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~l 331 (384)
T 3ldg_A 260 SGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKT--------NKINGVLISNPPYGERLLDDKAVDILYNEMGETF 331 (384)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCC--------CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCc--------cCCcCEEEECCchhhccCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999998889999999987532 3589999999872 23445666565666
Q ss_pred cC--CeEEE
Q 029836 121 KV--GGVIG 127 (187)
Q Consensus 121 ~~--gG~lv 127 (187)
++ |+.+.
T Consensus 332 k~~~g~~~~ 340 (384)
T 3ldg_A 332 APLKTWSQF 340 (384)
T ss_dssp TTCTTSEEE
T ss_pred hhCCCcEEE
Confidence 65 66554
No 255
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.23 E-value=1.7e-10 Score=89.09 Aligned_cols=88 Identities=18% Similarity=0.131 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH-
Q 029836 5 PDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL- 83 (187)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~- 83 (187)
+...+.+-..+...+..+|||||||+|..+..+++. ..+|+++|+++.+++.+++++... ++++++++|+.+.
T Consensus 36 ~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~~~---~~v~vi~gD~l~~~ 109 (295)
T 3gru_A 36 KNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKELY---NNIEIIWGDALKVD 109 (295)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHHHC---SSEEEEESCTTTSC
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhccC---CCeEEEECchhhCC
Confidence 334444444444556789999999999999999987 479999999999999999998742 5899999999864
Q ss_pred HHHHhhcccCCCceeEEEEcCCC
Q 029836 84 LDQLIQDEKYHGTFDFVFVDADK 106 (187)
Q Consensus 84 l~~~~~~~~~~~~~D~v~~d~~~ 106 (187)
++ ..+||.|+.+.+.
T Consensus 110 ~~--------~~~fD~Iv~NlPy 124 (295)
T 3gru_A 110 LN--------KLDFNKVVANLPY 124 (295)
T ss_dssp GG--------GSCCSEEEEECCG
T ss_pred cc--------cCCccEEEEeCcc
Confidence 22 3469999988653
No 256
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.21 E-value=5.9e-11 Score=94.07 Aligned_cols=105 Identities=19% Similarity=0.121 Sum_probs=83.4
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.+..+|||||||+|..+..+++..| +.+++..|. |+.++.++++++..+ .++++++.+|+.+. + ...+
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p-~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~-~--------~~~~ 245 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYP-GCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKD-P--------LPEA 245 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCS-SCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTS-C--------CCCC
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCC-CceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccC-C--------CCCc
Confidence 4567999999999999999999988 789999897 889999998876544 58999999998642 1 3468
Q ss_pred eEEEEcCC-----CcccHHHHHHHHhcccCCeEEEEeCcCCC
Q 029836 98 DFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNTLWG 134 (187)
Q Consensus 98 D~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
|++++-.. .+.....++++.+.|+|||.+++.+....
T Consensus 246 D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~ 287 (353)
T 4a6d_A 246 DLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLD 287 (353)
T ss_dssp SEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCC
T ss_pred eEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeC
Confidence 99987643 23346789999999999998888776543
No 257
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.21 E-value=1.4e-11 Score=97.97 Aligned_cols=97 Identities=11% Similarity=0.099 Sum_probs=77.4
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCcee
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D 98 (187)
+..+|||||||+|..+..+++.+| ..+++++|+ +.+++.+++ .++++++.+|+.+.++ .. |
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~D~~~~~p---------~~-D 261 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYP-TIKGVNFDL-PHVISEAPQ-------FPGVTHVGGDMFKEVP---------SG-D 261 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC-------CTTEEEEECCTTTCCC---------CC-S
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCC-CCeEEEecC-HHHHHhhhh-------cCCeEEEeCCcCCCCC---------CC-C
Confidence 467999999999999999999987 689999999 877766543 2689999999875322 23 9
Q ss_pred EEEEcCC-----CcccHHHHHHHHhcccCCeEEEEeCcCCC
Q 029836 99 FVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNTLWG 134 (187)
Q Consensus 99 ~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
+|++... .++...+++++.+.|+|||.+++.+....
T Consensus 262 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 302 (364)
T 3p9c_A 262 TILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILP 302 (364)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred EEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 9988654 23346789999999999999998877654
No 258
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.21 E-value=6.4e-12 Score=95.33 Aligned_cols=85 Identities=8% Similarity=0.067 Sum_probs=67.9
Q ss_pred HHHHhhcCC--CEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcC--------CCCceEEEeCCch
Q 029836 12 SMLLKLINA--KNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAG--------VAHKIDFREGPAL 81 (187)
Q Consensus 12 ~~l~~~~~~--~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~--------~~~~i~~~~~d~~ 81 (187)
...+...++ .+|||+|||+|..+++++.. +++|+++|.++...+.++++++... +..+++++++|+.
T Consensus 79 ~~al~l~~g~~~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~ 155 (258)
T 2oyr_A 79 AKAVGIKGDYLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSL 155 (258)
T ss_dssp HHHTTCBTTBCCCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHH
T ss_pred HHHhcccCCCCCEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHH
Confidence 334444556 89999999999999999986 4579999999998888888776432 2257999999999
Q ss_pred HHHHHHhhcccCCCceeEEEEcCC
Q 029836 82 PLLDQLIQDEKYHGTFDFVFVDAD 105 (187)
Q Consensus 82 ~~l~~~~~~~~~~~~~D~v~~d~~ 105 (187)
++++.+ .++||+|++|+.
T Consensus 156 ~~L~~~------~~~fDvV~lDP~ 173 (258)
T 2oyr_A 156 TALTDI------TPRPQVVYLDPM 173 (258)
T ss_dssp HHSTTC------SSCCSEEEECCC
T ss_pred HHHHhC------cccCCEEEEcCC
Confidence 887654 357999999986
No 259
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.20 E-value=5.2e-11 Score=99.93 Aligned_cols=101 Identities=19% Similarity=0.249 Sum_probs=76.6
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCc
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGT 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~ 96 (187)
..++.+|||||||.|..+..+++. +++|+|||.++.+++.|+....+.+. .++++.+++++++..... .++
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~-~~~~~~~~~~~~~~~~~~-----~~~ 134 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPD-FAAEFRVGRIEEVIAALE-----EGE 134 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTT-SEEEEEECCHHHHHHHCC-----TTS
T ss_pred cCCCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCC-CceEEEECCHHHHhhhcc-----CCC
Confidence 356889999999999999999986 68999999999999999999988775 379999999987765432 468
Q ss_pred eeEEEEcCCCccc-----HHHHHHHHhcccCCeEE
Q 029836 97 FDFVFVDADKDNY-----VNYHKRLIELVKVGGVI 126 (187)
Q Consensus 97 ~D~v~~d~~~~~~-----~~~~~~~~~~L~~gG~l 126 (187)
||+|++-..-++. ......+.+.|++++..
T Consensus 135 fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~ 169 (569)
T 4azs_A 135 FDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQA 169 (569)
T ss_dssp CSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSE
T ss_pred ccEEEECcchhcCCCHHHHHHHHHHHHHhccccce
Confidence 9999986552221 11222344556666543
No 260
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.20 E-value=1.5e-10 Score=89.67 Aligned_cols=84 Identities=13% Similarity=0.039 Sum_probs=68.8
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCc
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGT 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~ 96 (187)
..++.+|||+|||+|..+..+++.++ +++|+++|.++.+++.|+++++.++ .+++++++|+.++...+...+ .++
T Consensus 24 ~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~~l~~~g--~~~ 98 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADFLLKTLG--IEK 98 (301)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHHHHHHTT--CSC
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHHHHHhcC--CCC
Confidence 34567999999999999999999886 6899999999999999999998877 589999999876532221110 258
Q ss_pred eeEEEEcCC
Q 029836 97 FDFVFVDAD 105 (187)
Q Consensus 97 ~D~v~~d~~ 105 (187)
||.|++|..
T Consensus 99 ~D~Vl~D~g 107 (301)
T 1m6y_A 99 VDGILMDLG 107 (301)
T ss_dssp EEEEEEECS
T ss_pred CCEEEEcCc
Confidence 999999975
No 261
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.19 E-value=5e-11 Score=97.24 Aligned_cols=117 Identities=13% Similarity=0.073 Sum_probs=89.5
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCC------------CCCEEEEEeCCchHHHHHHHHHHHcCCCC
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIP------------DDGKILALDITKEHYEKGLPIIQKAGVAH 71 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~------------~~~~v~~vd~~~~~~~~a~~~~~~~~~~~ 71 (187)
+....+++..++...+..+|+|.|||+|.....+++.+. ...+++|+|+++.+++.|+.++...+...
T Consensus 156 P~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~ 235 (445)
T 2okc_A 156 PRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGT 235 (445)
T ss_dssp CHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCS
T ss_pred cHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCc
Confidence 445555666666555567999999999999998887541 13579999999999999999999888743
Q ss_pred -ceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCCc-------c-------------cHHHHHHHHhcccCCeEEEE
Q 029836 72 -KIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKD-------N-------------YVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 72 -~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~~-------~-------------~~~~~~~~~~~L~~gG~lv~ 128 (187)
++.+.++|+..... .++||+|+.+++.. . ...++..+.++|+|||.+++
T Consensus 236 ~~~~i~~gD~l~~~~--------~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~ 305 (445)
T 2okc_A 236 DRSPIVCEDSLEKEP--------STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAV 305 (445)
T ss_dssp SCCSEEECCTTTSCC--------SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCEeeCCCCCCcc--------cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEE
Confidence 67889999875421 34899999987611 0 14788999999999998865
No 262
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.17 E-value=2.9e-11 Score=96.41 Aligned_cols=97 Identities=13% Similarity=0.141 Sum_probs=77.3
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCcee
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D 98 (187)
++.+|||||||+|..+..+++..+ ..+++++|+ +.+++.+++ . ++++++.+|..+. + . .||
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~~---~------~-~~D 269 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYP-LIKGINFDL-PQVIENAPP------L-SGIEHVGGDMFAS---V------P-QGD 269 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC------C-TTEEEEECCTTTC---C------C-CEE
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCC-CCeEEEeCh-HHHHHhhhh------c-CCCEEEeCCcccC---C------C-CCC
Confidence 467999999999999999999886 689999999 888876654 1 5799999998752 1 2 399
Q ss_pred EEEEcCCC---cc--cHHHHHHHHhcccCCeEEEEeCcCCC
Q 029836 99 FVFVDADK---DN--YVNYHKRLIELVKVGGVIGYDNTLWG 134 (187)
Q Consensus 99 ~v~~d~~~---~~--~~~~~~~~~~~L~~gG~lv~~~~~~~ 134 (187)
+|++...- .+ ...+++.+.+.|+|||.+++.+....
T Consensus 270 ~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 310 (372)
T 1fp1_D 270 AMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILP 310 (372)
T ss_dssp EEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred EEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 99987541 22 23889999999999999998776543
No 263
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.15 E-value=5.4e-10 Score=88.45 Aligned_cols=119 Identities=15% Similarity=0.076 Sum_probs=93.3
Q ss_pred HHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCC-----CceEEEeCCchH
Q 029836 8 AQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVA-----HKIDFREGPALP 82 (187)
Q Consensus 8 ~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~-----~~i~~~~~d~~~ 82 (187)
..+...++...++.+|||+.+|.|.=|..++.... .+.|+++|+++..++..+++++..+.. .++.+...|+..
T Consensus 137 S~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~-~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~ 215 (359)
T 4fzv_A 137 SLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGC-CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRK 215 (359)
T ss_dssp GHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTC-EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGG
T ss_pred HHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcC-CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhh
Confidence 34555556666778999999999999999988654 578999999999999999999988753 578999999976
Q ss_pred HHHHHhhcccCCCceeEEEEcCCCcc---------------------------cHHHHHHHHhcccCCeEEEEeCcCC
Q 029836 83 LLDQLIQDEKYHGTFDFVFVDADKDN---------------------------YVNYHKRLIELVKVGGVIGYDNTLW 133 (187)
Q Consensus 83 ~l~~~~~~~~~~~~~D~v~~d~~~~~---------------------------~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
+.... .+.||.|++|++... ....++.+.++|||||.||...+..
T Consensus 216 ~~~~~------~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 216 WGELE------GDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp HHHHS------TTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred cchhc------cccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCC
Confidence 54332 568999999976211 0356777889999999999766543
No 264
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.13 E-value=7.8e-11 Score=93.19 Aligned_cols=98 Identities=14% Similarity=0.122 Sum_probs=77.8
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.+..+|||||||+|..+..+++.+| +.+++++|+ +.+++.+++ . ++++++.+|..+.+ . .|
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~~~---------p-~~ 247 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFP-KLKCIVFDR-PQVVENLSG------S-NNLTYVGGDMFTSI---------P-NA 247 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC------B-TTEEEEECCTTTCC---------C-CC
T ss_pred ccCceEEEeCCCccHHHHHHHHHCC-CCeEEEeeC-HHHHhhccc------C-CCcEEEeccccCCC---------C-Cc
Confidence 4568999999999999999999887 689999999 988877664 1 46999999986421 2 49
Q ss_pred eEEEEcCC---Cc--ccHHHHHHHHhcccC---CeEEEEeCcCCC
Q 029836 98 DFVFVDAD---KD--NYVNYHKRLIELVKV---GGVIGYDNTLWG 134 (187)
Q Consensus 98 D~v~~d~~---~~--~~~~~~~~~~~~L~~---gG~lv~~~~~~~ 134 (187)
|+|++... .. ....+++.+.+.|+| ||.+++.+....
T Consensus 248 D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 292 (352)
T 1fp2_A 248 DAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVID 292 (352)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEEC
T ss_pred cEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecC
Confidence 99998654 12 234889999999999 999988776543
No 265
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.12 E-value=4.9e-10 Score=84.89 Aligned_cols=91 Identities=11% Similarity=0.026 Sum_probs=68.7
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 83 (187)
.+...+.+-..+...+..+|||||||+|..+..+++. ..+|+++|+++.+++.+++++.. .++++++++|+.++
T Consensus 14 d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~avEid~~~~~~~~~~~~~---~~~v~~i~~D~~~~ 87 (255)
T 3tqs_A 14 DSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE---CDNLALVEIDRDLVAFLQKKYNQ---QKNITIYQNDALQF 87 (255)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT---SSEEEEEECCHHHHHHHHHHHTT---CTTEEEEESCTTTC
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHhh---CCCcEEEEcchHhC
Confidence 3444455555555567789999999999999999975 47999999999999999998865 36899999999875
Q ss_pred -HHHHhhcccCCCceeEEEEcCC
Q 029836 84 -LDQLIQDEKYHGTFDFVFVDAD 105 (187)
Q Consensus 84 -l~~~~~~~~~~~~~D~v~~d~~ 105 (187)
++.+.. .++|| |+.+.+
T Consensus 88 ~~~~~~~----~~~~~-vv~NlP 105 (255)
T 3tqs_A 88 DFSSVKT----DKPLR-VVGNLP 105 (255)
T ss_dssp CGGGSCC----SSCEE-EEEECC
T ss_pred CHHHhcc----CCCeE-EEecCC
Confidence 333210 24688 666654
No 266
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.08 E-value=4.2e-10 Score=86.70 Aligned_cols=90 Identities=13% Similarity=0.163 Sum_probs=67.1
Q ss_pred hcCCCEEEEEcccc------cHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEE-EeCCchHHHHHHhh
Q 029836 17 LINAKNTMEIGVFT------GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDF-REGPALPLLDQLIQ 89 (187)
Q Consensus 17 ~~~~~~vLeiG~g~------G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~-~~~d~~~~l~~~~~ 89 (187)
..+..+|||+|||+ |. ..+++.++++++|+++|+++. + +++++ +++|+.+.. .
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v-~~v~~~i~gD~~~~~--~-- 120 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------V-SDADSTLIGDCATVH--T-- 120 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------B-CSSSEEEESCGGGCC--C--
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------C-CCCEEEEECccccCC--c--
Confidence 34567999999944 66 445666665689999999997 1 36888 999987532 1
Q ss_pred cccCCCceeEEEEcCCCc--------------ccHHHHHHHHhcccCCeEEEEeC
Q 029836 90 DEKYHGTFDFVFVDADKD--------------NYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 90 ~~~~~~~~D~v~~d~~~~--------------~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.++||+|+++.... .+...++.+.+.|||||.+++..
T Consensus 121 ----~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~ 171 (290)
T 2xyq_A 121 ----ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI 171 (290)
T ss_dssp ----SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 35899999975311 13478899999999999999864
No 267
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.08 E-value=6e-10 Score=92.89 Aligned_cols=119 Identities=13% Similarity=0.042 Sum_probs=89.5
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCC-----------------CCEEEEEeCCchHHHHHHHHHHH
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPD-----------------DGKILALDITKEHYEKGLPIIQK 66 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~-----------------~~~v~~vd~~~~~~~~a~~~~~~ 66 (187)
+....+++..++...+..+|+|.+||+|.....+++.+.. ..+++|+|+++.+++.|+.++..
T Consensus 154 P~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l 233 (541)
T 2ar0_A 154 PRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLL 233 (541)
T ss_dssp CHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHH
Confidence 3445566666665555679999999999999888765421 13799999999999999999988
Q ss_pred cCCCC----ceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCCc---c--------------cHHHHHHHHhcccCCeE
Q 029836 67 AGVAH----KIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKD---N--------------YVNYHKRLIELVKVGGV 125 (187)
Q Consensus 67 ~~~~~----~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~~---~--------------~~~~~~~~~~~L~~gG~ 125 (187)
.+... ++.+.++|+....... .++||+|+.+++.. . ...++..+.+.|++||.
T Consensus 234 ~gi~~~~~~~~~I~~gDtL~~~~~~------~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr 307 (541)
T 2ar0_A 234 HDIEGNLDHGGAIRLGNTLGSDGEN------LPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGR 307 (541)
T ss_dssp TTCCCBGGGTBSEEESCTTSHHHHT------SCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEE
T ss_pred hCCCccccccCCeEeCCCccccccc------ccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCE
Confidence 88743 2788999987543221 46899999987611 1 23688999999999998
Q ss_pred EEE
Q 029836 126 IGY 128 (187)
Q Consensus 126 lv~ 128 (187)
+++
T Consensus 308 ~a~ 310 (541)
T 2ar0_A 308 AAV 310 (541)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 268
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.06 E-value=1.3e-09 Score=83.15 Aligned_cols=97 Identities=10% Similarity=-0.026 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH-
Q 029836 5 PDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL- 83 (187)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~- 83 (187)
+...+-+-..+...+. +|||||||+|..+..+++. +.+|+++|+++++++.+++++.. .+++++++|+.++
T Consensus 33 ~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~---~~~V~avEid~~~~~~l~~~~~~----~~v~vi~~D~l~~~ 104 (271)
T 3fut_A 33 EAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA---GAEVTAIEKDLRLRPVLEETLSG----LPVRLVFQDALLYP 104 (271)
T ss_dssp HHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT---TCCEEEEESCGGGHHHHHHHTTT----SSEEEEESCGGGSC
T ss_pred HHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcCC----CCEEEEECChhhCC
Confidence 3333444444445556 9999999999999999986 36899999999999999988752 5899999999875
Q ss_pred HHHHhhcccCCCceeEEEEcCCCcccHHHHHHH
Q 029836 84 LDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRL 116 (187)
Q Consensus 84 l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~ 116 (187)
++. ...+|.|+.+.+..-....+..+
T Consensus 105 ~~~-------~~~~~~iv~NlPy~iss~il~~l 130 (271)
T 3fut_A 105 WEE-------VPQGSLLVANLPYHIATPLVTRL 130 (271)
T ss_dssp GGG-------SCTTEEEEEEECSSCCHHHHHHH
T ss_pred hhh-------ccCccEEEecCcccccHHHHHHH
Confidence 221 13578998877643333333333
No 269
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.05 E-value=1.1e-09 Score=82.41 Aligned_cols=61 Identities=16% Similarity=0.128 Sum_probs=52.7
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 83 (187)
..++.+|||||||+|..+..+++. ..+|+++|+++.+++.+++++... ++++++++|+.+.
T Consensus 28 ~~~~~~VLDiG~G~G~lt~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~---~~v~~~~~D~~~~ 88 (244)
T 1qam_A 28 LNEHDNIFEIGSGKGHFTLELVQR---CNFVTAIEIDHKLCKTTENKLVDH---DNFQVLNKDILQF 88 (244)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHTTTC---CSEEEECCCGGGC
T ss_pred CCCCCEEEEEeCCchHHHHHHHHc---CCeEEEEECCHHHHHHHHHhhccC---CCeEEEEChHHhC
Confidence 345679999999999999999987 378999999999999999888642 5899999999764
No 270
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.04 E-value=5.2e-10 Score=88.66 Aligned_cols=97 Identities=13% Similarity=0.032 Sum_probs=76.8
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.+..+|||||||+|..+..+++.+| ..+++++|+ +.+++.+++ . ++++++.+|..+. ..+|
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~~----------~~~~ 252 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFP-HLKCTVFDQ-PQVVGNLTG------N-ENLNFVGGDMFKS----------IPSA 252 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCT-TSEEEEEEC-HHHHSSCCC------C-SSEEEEECCTTTC----------CCCC
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEecc-HHHHhhccc------C-CCcEEEeCccCCC----------CCCc
Confidence 4668999999999999999999987 689999999 777766553 2 4699999998752 1259
Q ss_pred eEEEEcCC---Ccc--cHHHHHHHHhcccC---CeEEEEeCcCC
Q 029836 98 DFVFVDAD---KDN--YVNYHKRLIELVKV---GGVIGYDNTLW 133 (187)
Q Consensus 98 D~v~~d~~---~~~--~~~~~~~~~~~L~~---gG~lv~~~~~~ 133 (187)
|+|++... ..+ ...+++.+.+.|+| ||.+++.+...
T Consensus 253 D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 253 DAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISI 296 (358)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEE
T ss_pred eEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEecc
Confidence 99998754 122 34889999999999 99998876654
No 271
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.02 E-value=7.9e-11 Score=91.53 Aligned_cols=95 Identities=9% Similarity=0.041 Sum_probs=66.5
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeC----CchHHHHHHHHHHHcCCCCceEEEeC-CchHHHHHHhhcccC
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDI----TKEHYEKGLPIIQKAGVAHKIDFREG-PALPLLDQLIQDEKY 93 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~----~~~~~~~a~~~~~~~~~~~~i~~~~~-d~~~~l~~~~~~~~~ 93 (187)
+..+|||+|||+|.++..+++. ++|+++|+ ++..++.+. .+..+ .++++++++ |..+. +
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~~--~~~~~-~~~v~~~~~~D~~~l-~-------- 145 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPIP--MSTYG-WNLVRLQSGVDVFFI-P-------- 145 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCCC--CCSTT-GGGEEEECSCCTTTS-C--------
T ss_pred CCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHHH--hhhcC-CCCeEEEeccccccC-C--------
Confidence 3579999999999999999875 47999999 453332110 11111 157899998 77543 2
Q ss_pred CCceeEEEEcCCCc--c----c---HHHHHHHHhcccCCeEEEEe
Q 029836 94 HGTFDFVFVDADKD--N----Y---VNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 94 ~~~~D~v~~d~~~~--~----~---~~~~~~~~~~L~~gG~lv~~ 129 (187)
.++||+|++|.... . . ...+..+.+.|||||.+++.
T Consensus 146 ~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 146 PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 45899999986521 1 1 14677788999999999984
No 272
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.01 E-value=4.1e-11 Score=91.34 Aligned_cols=98 Identities=9% Similarity=-0.025 Sum_probs=67.5
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHH-HHcCCCCceEEE--eCCchHHHHHHhhcccCCC
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPII-QKAGVAHKIDFR--EGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~-~~~~~~~~i~~~--~~d~~~~l~~~~~~~~~~~ 95 (187)
+..+|||+|||+|.++..+++. ++|++||+++ +...+++.. .......++.++ ++|+.++ + .+
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l-~--------~~ 139 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTL-P--------VE 139 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTS-C--------CC
T ss_pred CCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHC-C--------CC
Confidence 4579999999999999998875 5799999998 432221110 000011168888 8888753 2 46
Q ss_pred ceeEEEEcCCC--ccc-------HHHHHHHHhcccCCe--EEEEeC
Q 029836 96 TFDFVFVDADK--DNY-------VNYHKRLIELVKVGG--VIGYDN 130 (187)
Q Consensus 96 ~~D~v~~d~~~--~~~-------~~~~~~~~~~L~~gG--~lv~~~ 130 (187)
+||+|++|... ... ..+++.+.+.|+||| .+++..
T Consensus 140 ~fD~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 140 RTDVIMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CCcEEEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 89999998641 111 136788889999999 998854
No 273
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.01 E-value=4.7e-11 Score=91.55 Aligned_cols=98 Identities=7% Similarity=-0.060 Sum_probs=68.0
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHH-HHcCCCCceEEE--eCCchHHHHHHhhcccCCC
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPII-QKAGVAHKIDFR--EGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~-~~~~~~~~i~~~--~~d~~~~l~~~~~~~~~~~ 95 (187)
+..+|||+|||+|.++..+++. ++|++||+++ +...+++.. .......+++++ ++|+.++ + .+
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l-~--------~~ 147 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKM-E--------PF 147 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGC-C--------CC
T ss_pred CCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhC-C--------CC
Confidence 4579999999999999998875 5799999998 433222110 000111278899 8998753 2 46
Q ss_pred ceeEEEEcCCC--cc-----c--HHHHHHHHhcccCCe--EEEEeC
Q 029836 96 TFDFVFVDADK--DN-----Y--VNYHKRLIELVKVGG--VIGYDN 130 (187)
Q Consensus 96 ~~D~v~~d~~~--~~-----~--~~~~~~~~~~L~~gG--~lv~~~ 130 (187)
+||+|++|... .. . ..+++.+.+.|+||| .+++..
T Consensus 148 ~fD~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 148 QADTVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred CcCEEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 89999998641 11 1 136788889999999 988853
No 274
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.99 E-value=2.3e-09 Score=90.28 Aligned_cols=99 Identities=12% Similarity=-0.000 Sum_probs=77.2
Q ss_pred CCEEEEEcccccHHHHHHH---hhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCc
Q 029836 20 AKNTMEIGVFTGYSLLATA---LAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGT 96 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~---~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~ 96 (187)
...|||+|||+|......+ +......+|++||.++ +...+++..+.++..++|++++++.+++- + .++
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~--L------PEK 428 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWV--A------PEK 428 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCC--C------SSC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceecc--C------Ccc
Confidence 3579999999999854443 3322224799999997 56688899999999999999999998762 1 578
Q ss_pred eeEEEEcCC-----CcccHHHHHHHHhcccCCeEEE
Q 029836 97 FDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIG 127 (187)
Q Consensus 97 ~D~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv 127 (187)
.|+|+.-.- .+..++.+....+.|||||+++
T Consensus 429 VDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 429 ADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred cCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 999997542 4566777777779999999986
No 275
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.95 E-value=1.9e-09 Score=92.36 Aligned_cols=119 Identities=14% Similarity=0.117 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhC---C--------------------------------------C
Q 029836 5 PDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAI---P--------------------------------------D 43 (187)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~---~--------------------------------------~ 43 (187)
+.....+-.++...+...+||.+||+|.+.++.+... + .
T Consensus 176 e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~ 255 (703)
T 3v97_A 176 ETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEY 255 (703)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccC
Confidence 3334444444444566799999999999999877542 1 1
Q ss_pred CCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCCc-------ccHHHHHHH
Q 029836 44 DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKD-------NYVNYHKRL 116 (187)
Q Consensus 44 ~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~~-------~~~~~~~~~ 116 (187)
..+++++|+++.+++.|++|+..+|+.+.+++.++|+.+..+... .++||+|+.+++.. ....++..+
T Consensus 256 ~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~-----~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l 330 (703)
T 3v97_A 256 SSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP-----KGPYGTVLSNPPYGERLDSEPALIALHSLL 330 (703)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCT-----TCCCCEEEECCCCCC---CCHHHHHHHHHH
T ss_pred CccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccc-----cCCCCEEEeCCCccccccchhHHHHHHHHH
Confidence 257999999999999999999999998889999999987432110 23799999998721 223344433
Q ss_pred ---HhcccCCeEEEE
Q 029836 117 ---IELVKVGGVIGY 128 (187)
Q Consensus 117 ---~~~L~~gG~lv~ 128 (187)
.+.+.+||.+.+
T Consensus 331 ~~~lk~~~~g~~~~i 345 (703)
T 3v97_A 331 GRIMKNQFGGWNLSL 345 (703)
T ss_dssp HHHHHHHCTTCEEEE
T ss_pred HHHHHhhCCCCeEEE
Confidence 344457886654
No 276
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.94 E-value=3.5e-11 Score=90.67 Aligned_cols=102 Identities=10% Similarity=0.119 Sum_probs=73.2
Q ss_pred HHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccC
Q 029836 14 LLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKY 93 (187)
Q Consensus 14 l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~ 93 (187)
.+...+..+|||||||+|..+..+++. ..+++++|+++.+++.+++++. ..++++++++|+.+.. +. .
T Consensus 24 ~~~~~~~~~VLDiG~G~G~~~~~l~~~---~~~v~~id~~~~~~~~a~~~~~---~~~~v~~~~~D~~~~~--~~----~ 91 (245)
T 1yub_A 24 QLNLKETDTVYEIGTGKGHLTTKLAKI---SKQVTSIELDSHLFNLSSEKLK---LNTRVTLIHQDILQFQ--FP----N 91 (245)
T ss_dssp HCCCCSSEEEEECSCCCSSCSHHHHHH---SSEEEESSSSCSSSSSSSCTTT---TCSEEEECCSCCTTTT--CC----C
T ss_pred hcCCCCCCEEEEEeCCCCHHHHHHHHh---CCeEEEEECCHHHHHHHHHHhc---cCCceEEEECChhhcC--cc----c
Confidence 333445679999999999999999987 3799999999999998887765 2368999999997642 10 0
Q ss_pred CCceeEEEEcCCCcc--------------cHHHH----HHHHhcccCCeEEEE
Q 029836 94 HGTFDFVFVDADKDN--------------YVNYH----KRLIELVKVGGVIGY 128 (187)
Q Consensus 94 ~~~~D~v~~d~~~~~--------------~~~~~----~~~~~~L~~gG~lv~ 128 (187)
.++| .|+.+.+... ....+ +.+.++|+|||.+.+
T Consensus 92 ~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v 143 (245)
T 1yub_A 92 KQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGL 143 (245)
T ss_dssp SSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHH
T ss_pred CCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhh
Confidence 2578 6666654111 11122 557889999998754
No 277
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.93 E-value=7e-09 Score=79.54 Aligned_cols=74 Identities=11% Similarity=0.127 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCC-CCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH
Q 029836 5 PDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPD-DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (187)
Q Consensus 5 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~-~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 83 (187)
+...+.+-..+...+..+|||||||+|..+..+++..+. +++|+++|+++.+++.++++. ..+++++++|+.++
T Consensus 28 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 28 HGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGDALTF 102 (279)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESCGGGC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECChhcC
Confidence 344444444445556789999999999999999987542 245999999999999999883 26899999999874
No 278
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.90 E-value=9.2e-09 Score=77.63 Aligned_cols=109 Identities=14% Similarity=0.056 Sum_probs=71.5
Q ss_pred HHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH-H
Q 029836 6 DEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL-L 84 (187)
Q Consensus 6 ~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-l 84 (187)
...+.+-..+...++.+|||||||+|..+..+++. + ..+|+++|+++.+++.++++ . ..+++++++|+.++ +
T Consensus 18 ~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~-~~~v~avEid~~~~~~~~~~----~-~~~v~~i~~D~~~~~~ 90 (249)
T 3ftd_A 18 GVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH-P-LKKLYVIELDREMVENLKSI----G-DERLEVINEDASKFPF 90 (249)
T ss_dssp HHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS-C-CSEEEEECCCHHHHHHHTTS----C-CTTEEEECSCTTTCCG
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc-C-CCeEEEEECCHHHHHHHHhc----c-CCCeEEEEcchhhCCh
Confidence 33333333444456789999999999999999876 2 47999999999999999876 1 25899999999864 3
Q ss_pred HHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcc--cCCeEEEE
Q 029836 85 DQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELV--KVGGVIGY 128 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L--~~gG~lv~ 128 (187)
+.. .+.+ .|+.+.+..-....+..+.... -+.+++++
T Consensus 91 ~~~------~~~~-~vv~NlPy~i~~~il~~ll~~~~~~~~~~~m~ 129 (249)
T 3ftd_A 91 CSL------GKEL-KVVGNLPYNVASLIIENTVYNKDCVPLAVFMV 129 (249)
T ss_dssp GGS------CSSE-EEEEECCTTTHHHHHHHHHHTGGGCSEEEEEE
T ss_pred hHc------cCCc-EEEEECchhccHHHHHHHHhcCCCCceEEEEE
Confidence 322 2233 6666665433344444443322 23445543
No 279
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.88 E-value=1e-08 Score=86.64 Aligned_cols=105 Identities=7% Similarity=-0.114 Sum_probs=75.1
Q ss_pred CCEEEEEcccccHHHHHHHhhC---C---------CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHH
Q 029836 20 AKNTMEIGVFTGYSLLATALAI---P---------DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQL 87 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~~~~---~---------~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~ 87 (187)
.+.|||+|||+|..+...+.+. . ...+|++||.++.+...++.... ++..++|++++++++++-...
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 4589999999999875432221 1 13499999999987765555444 788889999999998863211
Q ss_pred hhcccCCCceeEEEEcCC-----CcccHHHHHHHHhcccCCeEEE
Q 029836 88 IQDEKYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIG 127 (187)
Q Consensus 88 ~~~~~~~~~~D~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv 127 (187)
...+ .++.|+|+.-.. .+-.++.+..+.+.|||||+++
T Consensus 489 ~~~~--~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KDRG--FEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHTT--CCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccCC--CCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 1111 468999997643 3445677777789999999986
No 280
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.85 E-value=3.6e-08 Score=82.09 Aligned_cols=121 Identities=12% Similarity=0.081 Sum_probs=93.3
Q ss_pred CCHHHHHHHHHHHh----hcCCCEEEEEcccccHHHHHHHhhCC--CCCEEEEEeCCchHHHHHHHHHHHcCCC-CceEE
Q 029836 3 TSPDEAQFFSMLLK----LINAKNTMEIGVFTGYSLLATALAIP--DDGKILALDITKEHYEKGLPIIQKAGVA-HKIDF 75 (187)
Q Consensus 3 ~~~~~~~~l~~l~~----~~~~~~vLeiG~g~G~~~~~l~~~~~--~~~~v~~vd~~~~~~~~a~~~~~~~~~~-~~i~~ 75 (187)
+++...++|..++. ..+..+|+|.+||+|.....+++.+. ...+++|+|+++.++..|+.|+...|.. +++.+
T Consensus 201 TP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I 280 (542)
T 3lkd_A 201 TPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFL 280 (542)
T ss_dssp CCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred ccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccce
Confidence 45677778888776 33567999999999999998888763 2478999999999999999999988885 47899
Q ss_pred EeCCchHH-HHHHhhcccCCCceeEEEEcCCC------c-----c-----c----------HHHHHHHHhccc-CCeEEE
Q 029836 76 REGPALPL-LDQLIQDEKYHGTFDFVFVDADK------D-----N-----Y----------VNYHKRLIELVK-VGGVIG 127 (187)
Q Consensus 76 ~~~d~~~~-l~~~~~~~~~~~~~D~v~~d~~~------~-----~-----~----------~~~~~~~~~~L~-~gG~lv 127 (187)
.++|+... ++.. ...+||+|+.+++. . + + ..|+..+.+.|+ +||.+.
T Consensus 281 ~~gDtL~~d~p~~-----~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a 355 (542)
T 3lkd_A 281 HNADTLDEDWPTQ-----EPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMA 355 (542)
T ss_dssp EESCTTTSCSCCS-----SCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEE
T ss_pred Eecceeccccccc-----ccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEE
Confidence 99998753 1211 14689999998661 0 0 1 237888999999 999885
Q ss_pred E
Q 029836 128 Y 128 (187)
Q Consensus 128 ~ 128 (187)
+
T Consensus 356 ~ 356 (542)
T 3lkd_A 356 I 356 (542)
T ss_dssp E
T ss_pred E
Confidence 4
No 281
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.85 E-value=2.6e-09 Score=89.06 Aligned_cols=119 Identities=8% Similarity=0.055 Sum_probs=87.6
Q ss_pred CCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCC--------------CCEEEEEeCCchHHHHHHHHHHHcC
Q 029836 3 TSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPD--------------DGKILALDITKEHYEKGLPIIQKAG 68 (187)
Q Consensus 3 ~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~--------------~~~v~~vd~~~~~~~~a~~~~~~~~ 68 (187)
+++...++|..++... +.+|+|.+||+|...+.+++.+.. ..+++|+|+++.+++.|+.++...+
T Consensus 229 TP~~Vv~lmv~ll~p~-~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g 307 (544)
T 3khk_A 229 TPKSIVTLIVEMLEPY-KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRG 307 (544)
T ss_dssp CCHHHHHHHHHHHCCC-SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHhcC-CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhC
Confidence 4556667777666543 349999999999988877654320 3589999999999999999999988
Q ss_pred CCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCCcc--------------------------------cHHHHHHH
Q 029836 69 VAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKDN--------------------------------YVNYHKRL 116 (187)
Q Consensus 69 ~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~~~--------------------------------~~~~~~~~ 116 (187)
+..++.+.++|+..... . ...+||+|+.+++... ...++..+
T Consensus 308 i~~~i~i~~gDtL~~~~-~-----~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~ 381 (544)
T 3khk_A 308 IDFNFGKKNADSFLDDQ-H-----PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHM 381 (544)
T ss_dssp CCCBCCSSSCCTTTSCS-C-----TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHH
T ss_pred CCcccceeccchhcCcc-c-----ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHH
Confidence 87666668888764311 1 1468999999876110 02588899
Q ss_pred HhcccCCeEEEE
Q 029836 117 IELVKVGGVIGY 128 (187)
Q Consensus 117 ~~~L~~gG~lv~ 128 (187)
.+.|++||.+++
T Consensus 382 l~~Lk~gGr~ai 393 (544)
T 3khk_A 382 LYHLAPTGSMAL 393 (544)
T ss_dssp HHTEEEEEEEEE
T ss_pred HHHhccCceEEE
Confidence 999999998754
No 282
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.81 E-value=2.4e-08 Score=75.50 Aligned_cols=94 Identities=10% Similarity=-0.003 Sum_probs=64.5
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 83 (187)
.+...+.+-..+...+..+|||||||+|..+. +.. .+ ..+|+++|+++.+++.+++++... ++++++++|+.+.
T Consensus 6 d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~~-~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~ 79 (252)
T 1qyr_A 6 DQFVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG-ER-LDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTF 79 (252)
T ss_dssp CHHHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-TT-CSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGC
T ss_pred CHHHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-CC-CCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhC
Confidence 34444444444455567899999999999999 653 22 234999999999999998876542 5899999999874
Q ss_pred -HHHHhhcccCCCceeEEEEcCCC
Q 029836 84 -LDQLIQDEKYHGTFDFVFVDADK 106 (187)
Q Consensus 84 -l~~~~~~~~~~~~~D~v~~d~~~ 106 (187)
++...+. .+..|.|+...+.
T Consensus 80 ~~~~~~~~---~~~~~~vvsNlPY 100 (252)
T 1qyr_A 80 NFGELAEK---MGQPLRVFGNLPY 100 (252)
T ss_dssp CHHHHHHH---HTSCEEEEEECCT
T ss_pred CHHHhhcc---cCCceEEEECCCC
Confidence 4443110 0134677776653
No 283
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.79 E-value=7.8e-09 Score=78.70 Aligned_cols=111 Identities=13% Similarity=0.188 Sum_probs=85.6
Q ss_pred HHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHH
Q 029836 8 AQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQL 87 (187)
Q Consensus 8 ~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~ 87 (187)
..+++.+-. .++..+||+.+|+|.+++++++. ..+++.+|.++..++..++|++. ..+++++++|....+..+
T Consensus 81 ~~yf~~l~~-~n~~~~LDlfaGSGaLgiEaLS~---~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~l 153 (283)
T 2oo3_A 81 LEYISVIKQ-INLNSTLSYYPGSPYFAINQLRS---QDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNAL 153 (283)
T ss_dssp HHHHHHHHH-HSSSSSCCEEECHHHHHHHHSCT---TSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHHH
T ss_pred HHHHHHHHH-hcCCCceeEeCCcHHHHHHHcCC---CCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHHh
Confidence 345555544 56788999999999999987762 57999999999999999998865 368999999998888766
Q ss_pred hhcccCCCceeEEEEcCCCc---ccHHHHHHHHh--cccCCeEEEE
Q 029836 88 IQDEKYHGTFDFVFVDADKD---NYVNYHKRLIE--LVKVGGVIGY 128 (187)
Q Consensus 88 ~~~~~~~~~~D~v~~d~~~~---~~~~~~~~~~~--~L~~gG~lv~ 128 (187)
... ..+||+||+|++.+ .+...++.+.. .+.++|++++
T Consensus 154 ~~~---~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 154 LPP---PEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCV 196 (283)
T ss_dssp CSC---TTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred cCC---CCCccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEE
Confidence 432 34799999999733 56666665553 5668898874
No 284
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.73 E-value=9.3e-08 Score=82.11 Aligned_cols=120 Identities=14% Similarity=0.070 Sum_probs=82.2
Q ss_pred CCHHHHHHHHHHHhh------cCCCEEEEEcccccHHHHHHHhhCCC--CCEEEEEeCCchHHHHH--HHHHHHcCCC--
Q 029836 3 TSPDEAQFFSMLLKL------INAKNTMEIGVFTGYSLLATALAIPD--DGKILALDITKEHYEKG--LPIIQKAGVA-- 70 (187)
Q Consensus 3 ~~~~~~~~l~~l~~~------~~~~~vLeiG~g~G~~~~~l~~~~~~--~~~v~~vd~~~~~~~~a--~~~~~~~~~~-- 70 (187)
+.++...++..++.. .++.+|||.|||+|.....+++.++. ..+++|+|+++.+++.| +.++..+.+.
T Consensus 299 TP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhG 378 (878)
T 3s1s_A 299 TDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSS 378 (878)
T ss_dssp CCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBT
T ss_pred CCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcC
Confidence 456777777777321 13569999999999999999887641 35799999999999999 5555432221
Q ss_pred -CceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCCc---c-----------------------------cHHHHHHHH
Q 029836 71 -HKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKD---N-----------------------------YVNYHKRLI 117 (187)
Q Consensus 71 -~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~~---~-----------------------------~~~~~~~~~ 117 (187)
....+...|........ .++||+|+.+++.. . +..+++.+.
T Consensus 379 i~~~~I~~dD~L~~~~~~------~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al 452 (878)
T 3s1s_A 379 NNAPTITGEDVCSLNPED------FANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVT 452 (878)
T ss_dssp TBCCEEECCCGGGCCGGG------GTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHH
T ss_pred CCcceEEecchhcccccc------cCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHH
Confidence 22355555655421111 46899999987620 0 234677888
Q ss_pred hcccCCeEEEE
Q 029836 118 ELVKVGGVIGY 128 (187)
Q Consensus 118 ~~L~~gG~lv~ 128 (187)
++|++||.+++
T Consensus 453 ~lLKpGGrLAf 463 (878)
T 3s1s_A 453 ELVQDGTVISA 463 (878)
T ss_dssp HHSCTTCEEEE
T ss_pred HhcCCCcEEEE
Confidence 99999998875
No 285
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.72 E-value=5.1e-09 Score=74.53 Aligned_cols=88 Identities=9% Similarity=0.070 Sum_probs=67.2
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHH-HhhcccCCC
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQ-LIQDEKYHG 95 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~-~~~~~~~~~ 95 (187)
..++.+|||+|||. +++|+++.+++.|+++.. .++++.++|+.+.... .. ++
T Consensus 10 ~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~-----~~~~~~~~d~~~~~~~~~~-----~~ 62 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTG-----NEGRVSVENIKQLLQSAHK-----ES 62 (176)
T ss_dssp CCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTT-----TTSEEEEEEGGGGGGGCCC-----SS
T ss_pred CCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhcc-----cCcEEEEechhcCccccCC-----CC
Confidence 34678999999975 238999999999988753 2588999998754210 01 57
Q ss_pred ceeEEEEcCC---C-cccHHHHHHHHhcccCCeEEEEeCc
Q 029836 96 TFDFVFVDAD---K-DNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 96 ~~D~v~~d~~---~-~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
+||+|++... . .+...+++++.+.|||||.+++.+.
T Consensus 63 ~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 63 SFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp CEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CEeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEcc
Confidence 8999998543 2 5678999999999999999998543
No 286
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.62 E-value=2.2e-07 Score=63.69 Aligned_cols=95 Identities=9% Similarity=0.038 Sum_probs=63.2
Q ss_pred HHHHHHHhhcC-CCEEEEEccccc-HHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHH
Q 029836 9 QFFSMLLKLIN-AKNTMEIGVFTG-YSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQ 86 (187)
Q Consensus 9 ~~l~~l~~~~~-~~~vLeiG~g~G-~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~ 86 (187)
.+...+.+... +.++||||||.| ..+..|++.. +..|+++|+++.+++ ++..|..+....
T Consensus 24 ~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~----------------~v~dDiF~P~~~ 85 (153)
T 2k4m_A 24 DLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGG----------------IVRDDITSPRME 85 (153)
T ss_dssp HHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTT----------------EECCCSSSCCHH
T ss_pred HHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccc----------------eEEccCCCCccc
Confidence 34444455544 579999999999 5999998743 578999999997664 777887664433
Q ss_pred HhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEe
Q 029836 87 LIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 87 ~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+ -+.||+|+.-.++.+....+..+.+. -|.-+++.
T Consensus 86 ~------Y~~~DLIYsirPP~El~~~i~~lA~~--v~adliI~ 120 (153)
T 2k4m_A 86 I------YRGAALIYSIRPPAEIHSSLMRVADA--VGARLIIK 120 (153)
T ss_dssp H------HTTEEEEEEESCCTTTHHHHHHHHHH--HTCEEEEE
T ss_pred c------cCCcCEEEEcCCCHHHHHHHHHHHHH--cCCCEEEE
Confidence 3 25899997544444544444444443 35555553
No 287
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.61 E-value=2e-07 Score=70.89 Aligned_cols=79 Identities=11% Similarity=0.053 Sum_probs=63.7
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCc
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGT 96 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~ 96 (187)
..++..+||.+||.|.-+..+++. +++|+++|.++.+++.|++ ++. +++++++++..++-..+...+ .++
T Consensus 20 ~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~~~g--~~~ 89 (285)
T 1wg8_A 20 VRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLAALG--VER 89 (285)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHHHTT--CSC
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHHHcC--CCC
Confidence 345679999999999999999986 5899999999999999988 643 589999999977643332221 357
Q ss_pred eeEEEEcCC
Q 029836 97 FDFVFVDAD 105 (187)
Q Consensus 97 ~D~v~~d~~ 105 (187)
+|.|++|..
T Consensus 90 vDgIL~DLG 98 (285)
T 1wg8_A 90 VDGILADLG 98 (285)
T ss_dssp EEEEEEECS
T ss_pred cCEEEeCCc
Confidence 999999865
No 288
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.29 E-value=3.2e-06 Score=65.80 Aligned_cols=82 Identities=15% Similarity=0.147 Sum_probs=64.2
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.++..+||..+|.|.-+..+++.+++.++|+++|.++.+++.++ .+ ..+++++++++..++...+...+. .+++
T Consensus 56 ~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL----~~~Rv~lv~~nF~~l~~~L~~~g~-~~~v 129 (347)
T 3tka_A 56 RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI----DDPRFSIIHGPFSALGEYVAERDL-IGKI 129 (347)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC----CCTTEEEEESCGGGHHHHHHHTTC-TTCE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh----cCCcEEEEeCCHHHHHHHHHhcCC-CCcc
Confidence 34579999999999999999998876899999999999999884 33 237899999999776554432221 1369
Q ss_pred eEEEEcCC
Q 029836 98 DFVFVDAD 105 (187)
Q Consensus 98 D~v~~d~~ 105 (187)
|.|++|..
T Consensus 130 DgILfDLG 137 (347)
T 3tka_A 130 DGILLDLG 137 (347)
T ss_dssp EEEEEECS
T ss_pred cEEEECCc
Confidence 99999843
No 289
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.28 E-value=2.1e-06 Score=67.79 Aligned_cols=70 Identities=7% Similarity=0.088 Sum_probs=53.9
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.++.++||+||+.|.|+..+++. +++|++||+.+-.- .+.. .++++++++|+..+.+. ..++
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~l~~-----~l~~---~~~V~~~~~d~~~~~~~-------~~~~ 271 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGPMAQ-----SLMD---TGQVTWLREDGFKFRPT-------RSNI 271 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSCCCH-----HHHT---TTCEEEECSCTTTCCCC-------SSCE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhhcCh-----hhcc---CCCeEEEeCccccccCC-------CCCc
Confidence 45789999999999999999875 58999999865221 1221 26899999998776432 4589
Q ss_pred eEEEEcCC
Q 029836 98 DFVFVDAD 105 (187)
Q Consensus 98 D~v~~d~~ 105 (187)
|+|++|..
T Consensus 272 D~vvsDm~ 279 (375)
T 4auk_A 272 SWMVCDMV 279 (375)
T ss_dssp EEEEECCS
T ss_pred CEEEEcCC
Confidence 99999986
No 290
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.27 E-value=3.8e-06 Score=69.86 Aligned_cols=121 Identities=12% Similarity=0.109 Sum_probs=87.0
Q ss_pred CCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCC------------CCEEEEEeCCchHHHHHHHHHHHcCCC
Q 029836 3 TSPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPD------------DGKILALDITKEHYEKGLPIIQKAGVA 70 (187)
Q Consensus 3 ~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~------------~~~v~~vd~~~~~~~~a~~~~~~~~~~ 70 (187)
++....+++..++......+|+|-.||+|.......+.+.. ...++|+|+++.....|+-|+--+|.
T Consensus 201 TP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~- 279 (530)
T 3ufb_A 201 TPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGL- 279 (530)
T ss_dssp CCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTC-
T ss_pred CcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCC-
Confidence 45677788888887777789999999999998876654321 24699999999999999999888887
Q ss_pred CceEEEeCCchHH-HHHHhhcccCCCceeEEEEcCCCc-------------------ccHHHHHHHHhccc-------CC
Q 029836 71 HKIDFREGPALPL-LDQLIQDEKYHGTFDFVFVDADKD-------------------NYVNYHKRLIELVK-------VG 123 (187)
Q Consensus 71 ~~i~~~~~d~~~~-l~~~~~~~~~~~~~D~v~~d~~~~-------------------~~~~~~~~~~~~L~-------~g 123 (187)
....+.++|+... ..... ...+||+|+.+++.. ....|+..+...|+ +|
T Consensus 280 ~~~~I~~~dtL~~~~~~~~----~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~g 355 (530)
T 3ufb_A 280 EYPRIDPENSLRFPLREMG----DKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNG 355 (530)
T ss_dssp SCCEEECSCTTCSCGGGCC----GGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSC
T ss_pred ccccccccccccCchhhhc----ccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCC
Confidence 3456778887642 11110 135799999997611 11346677777776 68
Q ss_pred eEEEE
Q 029836 124 GVIGY 128 (187)
Q Consensus 124 G~lv~ 128 (187)
|.+.+
T Consensus 356 Gr~av 360 (530)
T 3ufb_A 356 GRAAV 360 (530)
T ss_dssp CEEEE
T ss_pred ceEEE
Confidence 87654
No 291
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.13 E-value=5.7e-06 Score=62.62 Aligned_cols=101 Identities=13% Similarity=0.061 Sum_probs=62.1
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.+..+|||+|||.|.|+..+++..+ ..++.++|+.-........ ....+ .++..+++++.. . .+. .+++
T Consensus 73 ~~~~~VLDLGaAPGGWSQvAa~~~~-~~~v~g~dVGvDl~~~pi~-~~~~g--~~ii~~~~~~dv-~-~l~-----~~~~ 141 (277)
T 3evf_A 73 KLEGRVIDLGCGRGGWCYYAAAQKE-VSGVKGFTLGRDGHEKPMN-VQSLG--WNIITFKDKTDI-H-RLE-----PVKC 141 (277)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTCCCCCC-CCBTT--GGGEEEECSCCT-T-TSC-----CCCC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcC-CCcceeEEEeccCcccccc-cCcCC--CCeEEEecccee-h-hcC-----CCCc
Confidence 3456999999999999999887543 4678888876432100000 00001 144555665421 1 111 5689
Q ss_pred eEEEEcCCCc----cc-----HHHHHHHHhcccCC-eEEEEe
Q 029836 98 DFVFVDADKD----NY-----VNYHKRLIELVKVG-GVIGYD 129 (187)
Q Consensus 98 D~v~~d~~~~----~~-----~~~~~~~~~~L~~g-G~lv~~ 129 (187)
|+|+.|..+. .. ...++.+.+.|+|| |.+|+.
T Consensus 142 DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~K 183 (277)
T 3evf_A 142 DTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVK 183 (277)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred cEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEE
Confidence 9999997422 11 12457778999999 999984
No 292
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=98.04 E-value=1.8e-05 Score=62.36 Aligned_cols=59 Identities=5% Similarity=-0.086 Sum_probs=49.9
Q ss_pred CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH
Q 029836 20 AKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL 83 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 83 (187)
...|||||+|.|.+|..|++... ..+|+++|+++..+...++.+ . .++++++++|+.++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~-~---~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKF-E---GSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHT-T---TSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhc-c---CCCEEEEECCccch
Confidence 47899999999999999998633 368999999999998887766 2 26899999999765
No 293
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.01 E-value=2.8e-06 Score=64.42 Aligned_cols=101 Identities=11% Similarity=0.013 Sum_probs=62.8
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.+..+|||+||+.|.|+.++++..+ ..+++++|+.......+.. ....+ .++..+..+.. .. .+. .+++
T Consensus 89 k~~~~VLDLGaAPGGWsQvAa~~~g-v~sV~GvdvG~d~~~~pi~-~~~~g--~~ii~~~~~~d-v~-~l~-----~~~~ 157 (282)
T 3gcz_A 89 KPTGIVVDLGCGRGGWSYYAASLKN-VKKVMAFTLGVQGHEKPIM-RTTLG--WNLIRFKDKTD-VF-NME-----VIPG 157 (282)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCC-CCBTT--GGGEEEECSCC-GG-GSC-----CCCC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcC-CCeeeeEEeccCccccccc-cccCC--CceEEeeCCcc-hh-hcC-----CCCc
Confidence 4556999999999999999887544 4678999997543211110 00011 23333443321 11 111 5689
Q ss_pred eEEEEcCCCc-------c--cHHHHHHHHhcccCC--eEEEEe
Q 029836 98 DFVFVDADKD-------N--YVNYHKRLIELVKVG--GVIGYD 129 (187)
Q Consensus 98 D~v~~d~~~~-------~--~~~~~~~~~~~L~~g--G~lv~~ 129 (187)
|+|+.|..+. + ....++.+...|+|| |.+|+.
T Consensus 158 DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~K 200 (282)
T 3gcz_A 158 DTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIK 200 (282)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEE
Confidence 9999997532 1 123466677899999 999985
No 294
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.98 E-value=1.4e-05 Score=68.52 Aligned_cols=107 Identities=17% Similarity=0.152 Sum_probs=73.7
Q ss_pred CCEEEEEcccccHHHHHHHhhC-------CC----CCEEEEEeCCchHHHHHHHHH--------------HHcC------
Q 029836 20 AKNTMEIGVFTGYSLLATALAI-------PD----DGKILALDITKEHYEKGLPII--------------QKAG------ 68 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~~~~-------~~----~~~v~~vd~~~~~~~~a~~~~--------------~~~~------ 68 (187)
+-+|+|+|.|+|++.+.+.+.. |. ..+++++|..|-..+.+++.+ ....
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 4589999999999888766542 11 157999999664444444322 2211
Q ss_pred ----CC---CceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCCcc------cHHHHHHHHhcccCCeEEEE
Q 029836 69 ----VA---HKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKDN------YVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 69 ----~~---~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~~~------~~~~~~~~~~~L~~gG~lv~ 128 (187)
+. -+++++.||+.+.++++.... ...+|.+|+|+.... ..++|..+.+++++||.+.-
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~--~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 209 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSL--NNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFST 209 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGG--TTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEE
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhccccc--CCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 11 146788999999888762111 358999999986332 27889999999999999874
No 295
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.93 E-value=4.4e-05 Score=58.80 Aligned_cols=57 Identities=12% Similarity=0.119 Sum_probs=46.4
Q ss_pred HHHHHHHhh--cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcC
Q 029836 9 QFFSMLLKL--INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAG 68 (187)
Q Consensus 9 ~~l~~l~~~--~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~ 68 (187)
+++..++.. .+...|||.+||+|..+..++.. +.+++++|+++.+++.|+++++...
T Consensus 223 ~l~~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 223 ELAERLVRMFSFVGDVVLDPFAGTGTTLIAAARW---GRRALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp HHHHHHHHHHCCTTCEEEETTCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHHhc
Confidence 455555543 35679999999999999987764 4689999999999999999998753
No 296
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.91 E-value=0.0001 Score=56.81 Aligned_cols=103 Identities=17% Similarity=0.212 Sum_probs=66.4
Q ss_pred CCCEEEEEcccccHHHHHHH----hhCCCCC--EEEEEeCCc--------hHH-HHHHHHHHHcCC--CCc--eEEEeCC
Q 029836 19 NAKNTMEIGVFTGYSLLATA----LAIPDDG--KILALDITK--------EHY-EKGLPIIQKAGV--AHK--IDFREGP 79 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~----~~~~~~~--~v~~vd~~~--------~~~-~~a~~~~~~~~~--~~~--i~~~~~d 79 (187)
+.-+|||+|-|+|...+... +..+ .. +++++|..+ +.. +..+........ ..+ .++..||
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~-~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GD 174 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNP-KLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGD 174 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCT-TCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESC
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCC-CcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEech
Confidence 34589999999999754332 2223 34 567777532 112 222322332210 123 4678899
Q ss_pred chHHHHHHhhcccCCCceeEEEEcCC-C----cc-cHHHHHHHHhcccCCeEEE
Q 029836 80 ALPLLDQLIQDEKYHGTFDFVFVDAD-K----DN-YVNYHKRLIELVKVGGVIG 127 (187)
Q Consensus 80 ~~~~l~~~~~~~~~~~~~D~v~~d~~-~----~~-~~~~~~~~~~~L~~gG~lv 127 (187)
+.+.++.+. ...+|++|.|+. + +- ..++|..+.++++|||+++
T Consensus 175 a~~~l~~l~-----~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~la 223 (308)
T 3vyw_A 175 ARKRIKEVE-----NFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWV 223 (308)
T ss_dssp HHHHGGGCC-----SCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHhhhc-----ccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEE
Confidence 998888762 347999999985 1 11 2689999999999999998
No 297
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.88 E-value=5.2e-06 Score=62.09 Aligned_cols=94 Identities=10% Similarity=0.047 Sum_probs=59.0
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC--C-CCEEEEEe--CCchHHHHHHHHHHHcCCCCceEEEeC-CchHHHHHHhhccc
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIP--D-DGKILALD--ITKEHYEKGLPIIQKAGVAHKIDFREG-PALPLLDQLIQDEK 92 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~--~-~~~v~~vd--~~~~~~~~a~~~~~~~~~~~~i~~~~~-d~~~~l~~~~~~~~ 92 (187)
+..+|||+||+.|.|+.+.++..+ . .+.++++| +.|-... ..|. +-++|.++ |..+. +
T Consensus 73 pg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~-------~~Gv-~~i~~~~G~Df~~~-~------- 136 (269)
T 2px2_A 73 PIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQ-------SYGW-NIVTMKSGVDVFYK-P------- 136 (269)
T ss_dssp CCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCC-------STTG-GGEEEECSCCGGGS-C-------
T ss_pred CCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCccc-------CCCc-eEEEeeccCCccCC-C-------
Confidence 456999999999999999887622 1 24556666 2221000 0011 22466667 88752 1
Q ss_pred CCCceeEEEEcCCCc---------ccHHHHHHHHhcccCCe-EEEEe
Q 029836 93 YHGTFDFVFVDADKD---------NYVNYHKRLIELVKVGG-VIGYD 129 (187)
Q Consensus 93 ~~~~~D~v~~d~~~~---------~~~~~~~~~~~~L~~gG-~lv~~ 129 (187)
..++|+|++|..+. .....++.+.+.|+||| .+++.
T Consensus 137 -~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvK 182 (269)
T 2px2_A 137 -SEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIK 182 (269)
T ss_dssp -CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred -CCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEE
Confidence 35899999997521 11225677778999999 88763
No 298
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.79 E-value=0.00013 Score=53.99 Aligned_cols=99 Identities=12% Similarity=0.049 Sum_probs=65.3
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeC-CchHHHHHHhhcccCCC
Q 029836 17 LINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREG-PALPLLDQLIQDEKYHG 95 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~-d~~~~l~~~~~~~~~~~ 95 (187)
..+..+|||+||+.|.|+.+.+...+ ..+|.++|+-..-.+. -..++..|. +.++|+++ |.... + ..
T Consensus 76 l~~g~~VvDLGaapGGWSq~~a~~~g-~~~V~avdvG~~ghe~-P~~~~s~gw-n~v~fk~gvDv~~~-~--------~~ 143 (267)
T 3p8z_A 76 VIPEGRVIDLGCGRGGWSYYCAGLKK-VTEVRGYTKGGPGHEE-PVPMSTYGW-NIVKLMSGKDVFYL-P--------PE 143 (267)
T ss_dssp SCCCEEEEEESCTTSHHHHHHHTSTT-EEEEEEECCCSTTSCC-CCCCCCTTT-TSEEEECSCCGGGC-C--------CC
T ss_pred CCCCCEEEEcCCCCCcHHHHHHHhcC-CCEEEEEecCCCCccC-cchhhhcCc-CceEEEeccceeec-C--------Cc
Confidence 34566999999999999998887654 4689999986542210 000112233 57899998 76322 2 35
Q ss_pred ceeEEEEcCCCc---------ccHHHHHHHHhcccCCeEEEE
Q 029836 96 TFDFVFVDADKD---------NYVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 96 ~~D~v~~d~~~~---------~~~~~~~~~~~~L~~gG~lv~ 128 (187)
++|.|++|..+. .....++.+.+.|++ |-+++
T Consensus 144 ~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~ 184 (267)
T 3p8z_A 144 KCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCI 184 (267)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEE
T ss_pred cccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEE
Confidence 799999997521 123466677788888 56655
No 299
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.74 E-value=2.2e-05 Score=59.95 Aligned_cols=100 Identities=11% Similarity=0.047 Sum_probs=60.8
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCcee
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFD 98 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D 98 (187)
+.++|||+||+.|.|+..+++..+ ...|+++|+.......... ... ...++....... +.. .+ ..+.+|
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~g-v~sV~Gvdlg~~~~~~P~~-~~~--~~~~iv~~~~~~-di~-~l-----~~~~~D 149 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQKE-VMSVKGYTLGIEGHEKPIH-MQT--LGWNIVKFKDKS-NVF-TM-----PTEPSD 149 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCC-CCB--TTGGGEEEECSC-CTT-TS-----CCCCCS
T ss_pred CCCEEEEcCCCCCHHHHHHHHhcC-CceeeeEEecccccccccc-ccc--cCCceEEeecCc-eee-ec-----CCCCcC
Confidence 467999999999999999997643 4678999986532100000 000 011222222221 111 11 146899
Q ss_pred EEEEcCCCc-------c--cHHHHHHHHhcccCC-eEEEEe
Q 029836 99 FVFVDADKD-------N--YVNYHKRLIELVKVG-GVIGYD 129 (187)
Q Consensus 99 ~v~~d~~~~-------~--~~~~~~~~~~~L~~g-G~lv~~ 129 (187)
+|+.|..+. + ....++.+...|+|| |.+|+.
T Consensus 150 lVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 150 TLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp EEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred EEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 999997532 1 123466777899999 999986
No 300
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.70 E-value=0.00014 Score=55.44 Aligned_cols=88 Identities=13% Similarity=0.188 Sum_probs=59.9
Q ss_pred CCCEEEEEcc------cccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhccc
Q 029836 19 NAKNTMEIGV------FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEK 92 (187)
Q Consensus 19 ~~~~vLeiG~------g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~ 92 (187)
...+|||+|+ ..|.+ .+.+..|.++.|+++|+.+-.. . .. .+++||......
T Consensus 109 ~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s-----------d-a~-~~IqGD~~~~~~------- 166 (344)
T 3r24_A 109 YNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS-----------D-AD-STLIGDCATVHT------- 166 (344)
T ss_dssp TTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC-----------S-SS-EEEESCGGGEEE-------
T ss_pred CCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc-----------C-CC-eEEEcccccccc-------
Confidence 3579999996 67773 2334455446999999987431 1 12 558999754221
Q ss_pred CCCceeEEEEcCCC--------cc------cHHHHHHHHhcccCCeEEEEe
Q 029836 93 YHGTFDFVFVDADK--------DN------YVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 93 ~~~~~D~v~~d~~~--------~~------~~~~~~~~~~~L~~gG~lv~~ 129 (187)
.++||+|+.|..+ .. ....++.+...|+|||.+++.
T Consensus 167 -~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVK 216 (344)
T 3r24_A 167 -ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK 216 (344)
T ss_dssp -SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEE
Confidence 4789999999541 11 245667778899999999985
No 301
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.55 E-value=0.00028 Score=56.74 Aligned_cols=60 Identities=8% Similarity=0.139 Sum_probs=47.7
Q ss_pred cCCCEEEEEcccccHHHHHHH-hhCCCCCEEEEEeCCchHHHHHHHHHHH--cCCC-CceEEEe
Q 029836 18 INAKNTMEIGVFTGYSLLATA-LAIPDDGKILALDITKEHYEKGLPIIQK--AGVA-HKIDFRE 77 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~-~~~~~~~~v~~vd~~~~~~~~a~~~~~~--~~~~-~~i~~~~ 77 (187)
.+...++|||++.|..+..++ +..++.++|+++|++|...+..+++++. ++.. +++++++
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~ 288 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHG 288 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEEC
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEE
Confidence 456799999999999999988 4554348999999999999999999998 3322 4555544
No 302
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.54 E-value=0.0006 Score=58.21 Aligned_cols=106 Identities=20% Similarity=0.207 Sum_probs=70.3
Q ss_pred CEEEEEcccccHHHHHHHhhC-------C--C--CCEEEEEeC---CchHHHHH-----------HHHHHHcCCC-----
Q 029836 21 KNTMEIGVFTGYSLLATALAI-------P--D--DGKILALDI---TKEHYEKG-----------LPIIQKAGVA----- 70 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~l~~~~-------~--~--~~~v~~vd~---~~~~~~~a-----------~~~~~~~~~~----- 70 (187)
-+|+|+|.|+|...+...+.. | + ..+++++|. +++.+..+ ++.+......
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Confidence 489999999999877765542 1 1 246899998 44443322 2222222110
Q ss_pred --------CceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCC-----cc-cHHHHHHHHhcccCCeEEEE
Q 029836 71 --------HKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADK-----DN-YVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 71 --------~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~-----~~-~~~~~~~~~~~L~~gG~lv~ 128 (187)
-++++..||+.+.++++.... ...+|.+|.|+.. +- ..++|..+.+++++||.+.-
T Consensus 148 ~~~~~~~~~~l~l~~gd~~~~l~~~~~~~--~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 217 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDINELTSQLDDSL--NQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 217 (676)
T ss_dssp EEEEGGGTEEEEEEESCHHHHGGGBCGGG--TTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEE
T ss_pred EEEecCCcEEEEEecCCHHHHHHhccccc--CCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 235678899998888762211 3579999999861 11 36789999999999999874
No 303
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.53 E-value=0.00055 Score=54.49 Aligned_cols=78 Identities=12% Similarity=0.083 Sum_probs=46.6
Q ss_pred CCEEEEEcccccHHHHHHHhh-------------C---CCCCEEEEEeCC-----------chHHHHHHHHHHHcCCCCc
Q 029836 20 AKNTMEIGVFTGYSLLATALA-------------I---PDDGKILALDIT-----------KEHYEKGLPIIQKAGVAHK 72 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~~~-------------~---~~~~~v~~vd~~-----------~~~~~~a~~~~~~~~~~~~ 72 (187)
+.+|+|+||++|..|..+... . ++..+|+..|.. +...+.++ +..|...+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~---~~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLE---KENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHH---HHTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhh---hhccCCCC
Confidence 568999999999999987664 1 124678888876 33332221 12222123
Q ss_pred eEEEeCCchHHHHHHhhcccCCCceeEEEEcC
Q 029836 73 IDFREGPALPLLDQLIQDEKYHGTFDFVFVDA 104 (187)
Q Consensus 73 i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~ 104 (187)
..|+.+.+..+-.++.+ .+++|+|+...
T Consensus 130 ~~f~~gvpgSFy~rlfp----~~S~d~v~Ss~ 157 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFP----EESMHFLHSCY 157 (384)
T ss_dssp SEEEEECCSCTTSCCSC----TTCEEEEEEES
T ss_pred ceEEEecchhhhhccCC----CCceEEEEecc
Confidence 45555555444333332 57999999764
No 304
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.50 E-value=0.00018 Score=54.86 Aligned_cols=99 Identities=10% Similarity=0.074 Sum_probs=62.7
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeC-CchHHHHHHhhcccCCCc
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREG-PALPLLDQLIQDEKYHGT 96 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~-d~~~~l~~~~~~~~~~~~ 96 (187)
.+..+|||+||+.|.|+.+.+...+ ..+|.++|+-..-.+. -..+.+.+. +-++++.+ |.... + ..+
T Consensus 93 ~~~~~VlDLGaapGGwsq~~~~~~g-v~~V~avdvG~~~he~-P~~~~ql~w-~lV~~~~~~Dv~~l-~--------~~~ 160 (321)
T 3lkz_A 93 EPVGKVIDLGCGRGGWCYYMATQKR-VQEVRGYTKGGPGHEE-PQLVQSYGW-NIVTMKSGVDVFYR-P--------SEC 160 (321)
T ss_dssp CCCEEEEEETCTTCHHHHHHTTCTT-EEEEEEECCCSTTSCC-CCCCCBTTG-GGEEEECSCCTTSS-C--------CCC
T ss_pred CCCCEEEEeCCCCCcHHHHHHhhcC-CCEEEEEEcCCCCccC-cchhhhcCC-cceEEEeccCHhhC-C--------CCC
Confidence 3456999999999999998886643 4689999997541100 000011111 23777777 55322 2 356
Q ss_pred eeEEEEcCCCc---------ccHHHHHHHHhcccCC-eEEEE
Q 029836 97 FDFVFVDADKD---------NYVNYHKRLIELVKVG-GVIGY 128 (187)
Q Consensus 97 ~D~v~~d~~~~---------~~~~~~~~~~~~L~~g-G~lv~ 128 (187)
+|+|++|.... .....++.+.+.|++| |-+++
T Consensus 161 ~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~ 202 (321)
T 3lkz_A 161 CDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCV 202 (321)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEE
Confidence 99999996521 1233666667888888 77776
No 305
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.41 E-value=0.00045 Score=52.08 Aligned_cols=58 Identities=5% Similarity=0.120 Sum_probs=45.1
Q ss_pred HHHHHHHhh--cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCC
Q 029836 9 QFFSMLLKL--INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGV 69 (187)
Q Consensus 9 ~~l~~l~~~--~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~ 69 (187)
+++..++.. .+...|||..||+|..+....+. +.+++++|+++..++.++++++..++
T Consensus 200 ~l~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~---gr~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 200 DLIERIIRASSNPNDLVLDCFMGSGTTAIVAKKL---GRNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp HHHHHHHHHHCCTTCEEEESSCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHhccC
Confidence 455555543 35679999999999998887764 46899999999999999999986543
No 306
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=97.36 E-value=0.00092 Score=52.82 Aligned_cols=102 Identities=19% Similarity=0.251 Sum_probs=65.8
Q ss_pred hcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 17 LINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 17 ~~~~~~vLeiG~g~-G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
..+.++||.+|+|. |..+..+++..+ ..+|+++|.+++..+.+++ .|...-+.....+..+.+.+.. .+
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~~~~~~-----~g 257 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCG-ASIIIAVDIVESRLELAKQ----LGATHVINSKTQDPVAAIKEIT-----DG 257 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHT-----TS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHHH----cCCCEEecCCccCHHHHHHHhc-----CC
Confidence 34568999999875 777888888753 2479999999988877754 3431111111122222233321 34
Q ss_pred ceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 96 TFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 96 ~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.+|+||--.. ....++.+.+.|+++|.++.-..
T Consensus 258 g~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 258 GVNFALESTG---SPEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp CEEEEEECSC---CHHHHHHHHHTEEEEEEEEECCC
T ss_pred CCcEEEECCC---CHHHHHHHHHHHhcCCEEEEeCC
Confidence 7999985332 24567888999999999987544
No 307
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=97.35 E-value=0.0011 Score=51.74 Aligned_cols=100 Identities=18% Similarity=0.129 Sum_probs=67.1
Q ss_pred hcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 17 LINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 17 ~~~~~~vLeiG~g~-G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
..+.++||-+|+|. |..+..+++.. +.+|++++.+++..+.+++ .|.. . ++..+..++...+... .+
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~-~--~i~~~~~~~~~~~~~~---~g 231 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAM--GLRVAAVDIDDAKLNLARR----LGAE-V--AVNARDTDPAAWLQKE---IG 231 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----TTCS-E--EEETTTSCHHHHHHHH---HS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHH----cCCC-E--EEeCCCcCHHHHHHHh---CC
Confidence 34668999999874 88888889876 4699999999988876654 4532 1 2222222222222221 34
Q ss_pred ceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 96 TFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 96 ~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.+|+|+.... ....++.+.+.|+++|.++.-..
T Consensus 232 ~~d~vid~~g---~~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 232 GAHGVLVTAV---SPKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp SEEEEEESSC---CHHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCEEEEeCC---CHHHHHHHHHHhccCCEEEEeCC
Confidence 7999986532 35678888999999999987543
No 308
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.28 E-value=0.0003 Score=55.84 Aligned_cols=39 Identities=10% Similarity=0.231 Sum_probs=27.8
Q ss_pred CCEEEEEcccccHHHHHHHh--------hC------CCCCEEEEEeCCchHHH
Q 029836 20 AKNTMEIGVFTGYSLLATAL--------AI------PDDGKILALDITKEHYE 58 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~~--------~~------~~~~~v~~vd~~~~~~~ 58 (187)
+.+|+|+||++|..|..+.. .. ++..+|..-|.......
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn 105 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFN 105 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHH
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchH
Confidence 46899999999999988732 11 23567888887665543
No 309
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=97.25 E-value=0.0013 Score=52.52 Aligned_cols=106 Identities=19% Similarity=0.200 Sum_probs=67.0
Q ss_pred hhcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCc-hHHHHHHhhcccC
Q 029836 16 KLINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA-LPLLDQLIQDEKY 93 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~-~~~l~~~~~~~~~ 93 (187)
...+.++||.+|+|. |..+..+++..+ ..+|+++|.+++.++.++ +.|. +-+.....+. .+.+..+..
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa-~~i~~~~~~~~~~~~~~~~~---- 251 (398)
T 2dph_A 182 GVKPGSHVYIAGAGPVGRCAAAGARLLG-AACVIVGDQNPERLKLLS----DAGF-ETIDLRNSAPLRDQIDQILG---- 251 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHH----TTTC-EEEETTSSSCHHHHHHHHHS----
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHH----HcCC-cEEcCCCcchHHHHHHHHhC----
Confidence 344678999999875 778888888753 349999999998877664 3454 2111111222 333333320
Q ss_pred CCceeEEEEcCCCcc-----------cHHHHHHHHhcccCCeEEEEeCc
Q 029836 94 HGTFDFVFVDADKDN-----------YVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 94 ~~~~D~v~~d~~~~~-----------~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
...+|+||--..... ....++.+.+.|++||.+++-..
T Consensus 252 g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 252 KPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp SSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred CCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence 236999985433221 13468888999999999986443
No 310
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.22 E-value=0.00015 Score=57.25 Aligned_cols=108 Identities=12% Similarity=0.133 Sum_probs=67.7
Q ss_pred CCEEEEEcccccHHHHHHHhh---------------CCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHH
Q 029836 20 AKNTMEIGVFTGYSLLATALA---------------IPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLL 84 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~~~---------------~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l 84 (187)
+-+|+|+||++|..+..+... -++..+|+..|........+-+.+.......+..|+.+.+..+-
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 357899999999988765544 13357899999988877766555543211012345444443332
Q ss_pred HHHhhcccCCCceeEEEEcCC-------Cc-----------------------------ccHHHHHHHHhcccCCeEEEE
Q 029836 85 DQLIQDEKYHGTFDFVFVDAD-------KD-----------------------------NYVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~v~~d~~-------~~-----------------------------~~~~~~~~~~~~L~~gG~lv~ 128 (187)
.++.+ .+++|+|+.... ++ +...+++.-.+.|+|||.+++
T Consensus 132 ~rlfp----~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl 207 (359)
T 1m6e_X 132 GRLFP----RNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVL 207 (359)
T ss_dssp SCCSC----TTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEE
T ss_pred hccCC----CCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEE
Confidence 22221 568999987642 10 123456666799999999998
Q ss_pred eCc
Q 029836 129 DNT 131 (187)
Q Consensus 129 ~~~ 131 (187)
.-.
T Consensus 208 ~~~ 210 (359)
T 1m6e_X 208 TIL 210 (359)
T ss_dssp EEE
T ss_pred EEe
Confidence 644
No 311
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=97.19 E-value=0.00096 Score=47.82 Aligned_cols=100 Identities=14% Similarity=0.095 Sum_probs=60.9
Q ss_pred hcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCC
Q 029836 17 LINAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYH 94 (187)
Q Consensus 17 ~~~~~~vLeiG~--g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~ 94 (187)
..+.++||.+|+ |.|.....++... +.+|++++.+++..+.+++ .+. ... ...+..+....+.+.. ..
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~----~g~--~~~-~d~~~~~~~~~~~~~~-~~ 105 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREMLSR----LGV--EYV-GDSRSVDFADEILELT-DG 105 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHT----TCC--SEE-EETTCSTHHHHHHHHT-TT
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCC--CEE-eeCCcHHHHHHHHHHh-CC
Confidence 345689999994 5566666666654 4789999999877665533 343 111 2211112222221110 02
Q ss_pred CceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 95 GTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 95 ~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
..+|+++.... ...++.+.+.|++||.++.-.
T Consensus 106 ~~~D~vi~~~g----~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 106 YGVDVVLNSLA----GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp CCEEEEEECCC----THHHHHHHHTEEEEEEEEECS
T ss_pred CCCeEEEECCc----hHHHHHHHHHhccCCEEEEEc
Confidence 36999986543 256788889999999998743
No 312
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=97.16 E-value=0.0017 Score=51.34 Aligned_cols=104 Identities=13% Similarity=0.058 Sum_probs=67.2
Q ss_pred HhhcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhh---c
Q 029836 15 LKLINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQ---D 90 (187)
Q Consensus 15 ~~~~~~~~vLeiG~g~-G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~---~ 90 (187)
+...+.++||-+|+|. |..+..+++..+ ..+|++++.+++..+.+++ .|.. .++.-...++...+.. .
T Consensus 178 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~i~~~~~~ 249 (370)
T 4ej6_A 178 SGIKAGSTVAILGGGVIGLLTVQLARLAG-ATTVILSTRQATKRRLAEE----VGAT---ATVDPSAGDVVEAIAGPVGL 249 (370)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHHH----HTCS---EEECTTSSCHHHHHHSTTSS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----cCCC---EEECCCCcCHHHHHHhhhhc
Confidence 3455678999999864 667778888764 3499999999988877655 4442 1222222222232221 1
Q ss_pred ccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 91 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 91 ~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
. .+.+|+||-.. .....++.+.+.|++||.+++-..
T Consensus 250 ~--~gg~Dvvid~~---G~~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 250 V--PGGVDVVIECA---GVAETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp S--TTCEEEEEECS---CCHHHHHHHHHHEEEEEEEEECSC
T ss_pred c--CCCCCEEEECC---CCHHHHHHHHHHhccCCEEEEEec
Confidence 1 34799998532 234568888999999999987544
No 313
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=97.15 E-value=0.0036 Score=49.13 Aligned_cols=102 Identities=11% Similarity=0.048 Sum_probs=66.6
Q ss_pred hhcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCC---chHHHHHHhhcc
Q 029836 16 KLINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGP---ALPLLDQLIQDE 91 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d---~~~~l~~~~~~~ 91 (187)
...+.++||-+|+|. |..+..+++..+ ..+|+++|.+++..+.+++ .|. + .++..+ ..++...+....
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa-~--~vi~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAMG-AAQVVVTDLSATRLSKAKE----IGA-D--LVLQISKESPQEIARKVEGQL 239 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHH----TTC-S--EEEECSSCCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----hCC-C--EEEcCcccccchHHHHHHHHh
Confidence 345678999999874 777888888763 2389999999988776653 454 2 223322 233333332211
Q ss_pred cCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 92 KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 92 ~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.+.+|+||-... ....++.+.+.|++||.++.-.
T Consensus 240 --~~g~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 240 --GCKPEVTIECTG---AEASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp --TSCCSEEEECSC---CHHHHHHHHHHSCTTCEEEECS
T ss_pred --CCCCCEEEECCC---ChHHHHHHHHHhcCCCEEEEEe
Confidence 246999985432 2456778889999999998754
No 314
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.09 E-value=0.0024 Score=50.08 Aligned_cols=76 Identities=11% Similarity=-0.002 Sum_probs=56.0
Q ss_pred CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeE
Q 029836 20 AKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDF 99 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~ 99 (187)
+.+++|+.||.|..++.+..+.-.-..+.++|+++.+++..+.|+. ...++.+|..++.+.... ...+|+
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~------~~~~~~~Di~~~~~~~~~----~~~~D~ 71 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP------HTQLLAKTIEGITLEEFD----RLSFDM 71 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT------TSCEECSCGGGCCHHHHH----HHCCSE
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc------ccccccCCHHHccHhHcC----cCCcCE
Confidence 4589999999999999988762101369999999999998888874 334678888775432211 126899
Q ss_pred EEEcCC
Q 029836 100 VFVDAD 105 (187)
Q Consensus 100 v~~d~~ 105 (187)
++.+.+
T Consensus 72 l~~gpP 77 (343)
T 1g55_A 72 ILMSPP 77 (343)
T ss_dssp EEECCC
T ss_pred EEEcCC
Confidence 999876
No 315
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.03 E-value=0.027 Score=43.54 Aligned_cols=111 Identities=8% Similarity=-0.035 Sum_probs=72.7
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCC--CCceEEEeCCchH-HHHHHhhcccCCC
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGV--AHKIDFREGPALP-LLDQLIQDEKYHG 95 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~--~~~i~~~~~d~~~-~l~~~~~~~~~~~ 95 (187)
.+..||++|||.-.-...+. .+.+.+++-|| .|..++..++.+.+.+. ..+.+++..|..+ ++..+...+.+..
T Consensus 102 g~~QvV~LGaGlDTra~Rl~--~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 102 GIRQFVILASGLDSRAYRLD--WPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPS 178 (310)
T ss_dssp TCCEEEEETCTTCCHHHHSC--CCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTT
T ss_pred CCCeEEEeCCCCCchhhhcc--CCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCC
Confidence 46789999997655433222 23347899999 69999999999986543 3678888888875 3333332221122
Q ss_pred ceeEEEEcCC-----CcccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 96 TFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 96 ~~D~v~~d~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
..=++++-+. .+....+++.+...+.+|+.|+++.+.
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp SCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred CCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence 3334444433 334566788888888899999998654
No 316
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=96.98 E-value=0.0046 Score=48.66 Aligned_cols=97 Identities=12% Similarity=0.031 Sum_probs=64.7
Q ss_pred hhcCCCEEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeC---CchHHHHHHhhc
Q 029836 16 KLINAKNTMEIG--VFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREG---PALPLLDQLIQD 90 (187)
Q Consensus 16 ~~~~~~~vLeiG--~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~---d~~~~l~~~~~~ 90 (187)
...+.++||-+| .+.|..+..+++.. +.+|++++.+++..+.+++ .|. + .++.. +..+.+....
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga-~--~~~~~~~~~~~~~~~~~~-- 228 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKA--KCHVIGTCSSDEKSAFLKS----LGC-D--RPINYKTEPVGTVLKQEY-- 228 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTC-S--EEEETTTSCHHHHHHHHC--
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHH----cCC-c--EEEecCChhHHHHHHHhc--
Confidence 345678999999 45777888888875 4699999999887776654 443 2 12222 2222222221
Q ss_pred ccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 91 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 91 ~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
...+|+||-.... ..++.+.+.|+++|.++.-.
T Consensus 229 ---~~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 229 ---PEGVDVVYESVGG----AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp ---TTCEEEEEECSCT----HHHHHHHHHEEEEEEEEECC
T ss_pred ---CCCCCEEEECCCH----HHHHHHHHHHhcCCEEEEEe
Confidence 3479999854432 56788889999999988644
No 317
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=96.96 E-value=0.013 Score=45.68 Aligned_cols=103 Identities=12% Similarity=0.018 Sum_probs=66.1
Q ss_pred hcCCCEEEEEccccc-HHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 17 LINAKNTMEIGVFTG-YSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 17 ~~~~~~vLeiG~g~G-~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
..+.++||-+|+|.+ ..+..+++... +.+|+++|.+++..+.+++ .|...-+.....|..+.+..+.. ..
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~~~~----~Ga~~~i~~~~~~~~~~v~~~t~----g~ 231 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKLNLAKK----IGADVTINSGDVNPVDEIKKITG----GL 231 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHHHHHHH----TTCSEEEEC-CCCHHHHHHHHTT----SS
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHhhhhhh----cCCeEEEeCCCCCHHHHhhhhcC----CC
Confidence 445689999999864 45555666554 6899999999987766554 44422233333444444443321 23
Q ss_pred ceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 96 TFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 96 ~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.+|.++.+.. ....+..+.+.|+++|.++.-..
T Consensus 232 g~d~~~~~~~---~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 232 GVQSAIVCAV---ARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp CEEEEEECCS---CHHHHHHHHHTEEEEEEEEECCC
T ss_pred CceEEEEecc---CcchhheeheeecCCceEEEEec
Confidence 6788876542 35567788899999999987543
No 318
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=96.95 E-value=0.00038 Score=67.27 Aligned_cols=102 Identities=11% Similarity=0.035 Sum_probs=55.3
Q ss_pred CCEEEEEcccccHHHHHHHhhCCC----CCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 20 AKNTMEIGVFTGYSLLATALAIPD----DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~~~~~~----~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
..+|||||.|+|..+..++..+.. ..+++..|+++...+.+++.++.. .+....-|..+. ..+. .+
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~----di~~~~~d~~~~-~~~~-----~~ 1310 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL----HVTQGQWDPANP-APGS-----LG 1310 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH----TEEEECCCSSCC-CC---------
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc----cccccccccccc-ccCC-----CC
Confidence 469999999999988877776642 247899999999988888887653 222211122110 0000 35
Q ss_pred ceeEEEEcCC---CcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 96 TFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 96 ~~D~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
+||+|+.... ..+....+..++++|+|||++++...
T Consensus 1311 ~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1311 KADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp -CCEEEEECC--------------------CCEEEEEEC
T ss_pred ceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 7999997654 23456678889999999999988654
No 319
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.94 E-value=0.0038 Score=49.59 Aligned_cols=77 Identities=13% Similarity=-0.071 Sum_probs=55.8
Q ss_pred CEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHH-HhhcccCCCceeE
Q 029836 21 KNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQ-LIQDEKYHGTFDF 99 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~-~~~~~~~~~~~D~ 99 (187)
.+++|+.||.|..++.+..+- -..+.++|+++.+++..+.|+ ++..++.+|..++... +.........+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG--~~~v~avE~d~~a~~t~~~N~------~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~ 74 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG--FDVKMAVEIDQHAINTHAINF------PRSLHVQEDVSLLNAEIIKGFFKNDMPIDG 74 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT--CEEEEEECSCHHHHHHHHHHC------TTSEEECCCGGGCCHHHHHHHHCSCCCCCE
T ss_pred CeEEEEccCcCHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHhC------CCCceEecChhhcCHHHHHhhcccCCCeeE
Confidence 579999999999999988762 245779999999988888775 3567788888765332 2100001357999
Q ss_pred EEEcCC
Q 029836 100 VFVDAD 105 (187)
Q Consensus 100 v~~d~~ 105 (187)
|+.+++
T Consensus 75 i~ggpP 80 (376)
T 3g7u_A 75 IIGGPP 80 (376)
T ss_dssp EEECCC
T ss_pred EEecCC
Confidence 999876
No 320
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.91 E-value=0.011 Score=46.27 Aligned_cols=105 Identities=10% Similarity=0.042 Sum_probs=64.3
Q ss_pred hhcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEe-CCchHHHHHHhhcccC
Q 029836 16 KLINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFRE-GPALPLLDQLIQDEKY 93 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~-~d~~~~l~~~~~~~~~ 93 (187)
...+.++||-+|+|. |..+..+++.. +.+|++++.+++..+.+++ .|...-+.... .+..+.+....... .
T Consensus 165 ~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~~~~~i~~~~~~~-~ 237 (352)
T 1e3j_A 165 GVQLGTTVLVIGAGPIGLVSVLAAKAY--GAFVVCTARSPRRLEVAKN----CGADVTLVVDPAKEEESSIIERIRSA-I 237 (352)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----TTCSEEEECCTTTSCHHHHHHHHHHH-S
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHH----hCCCEEEcCcccccHHHHHHHHhccc-c
Confidence 345678999999864 66777788875 4679999999988776653 45421111110 22222222221100 0
Q ss_pred CCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 94 HGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 94 ~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
...+|+||-... ....++.+.+.|+++|.++.-.
T Consensus 238 g~g~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 238 GDLPNVTIDCSG---NEKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp SSCCSEEEECSC---CHHHHHHHHHHSCTTCEEEECS
T ss_pred CCCCCEEEECCC---CHHHHHHHHHHHhcCCEEEEEe
Confidence 146999985432 2446778889999999998754
No 321
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.89 E-value=0.0023 Score=50.09 Aligned_cols=105 Identities=21% Similarity=0.277 Sum_probs=65.7
Q ss_pred hhcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCC
Q 029836 16 KLINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYH 94 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~ 94 (187)
...+.++||-+|+|. |..+..+++..+ ..+|+++|.+++..+.+++ .|...-+.....+..+.+.... ..
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~~----lGa~~vi~~~~~~~~~~v~~~t----~g 233 (352)
T 3fpc_A 163 NIKLGDTVCVIGIGPVGLMSVAGANHLG-AGRIFAVGSRKHCCDIALE----YGATDIINYKNGDIVEQILKAT----DG 233 (352)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHTTT-CSSEEEECCCHHHHHHHHH----HTCCEEECGGGSCHHHHHHHHT----TT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEECCCHHHHHHHHH----hCCceEEcCCCcCHHHHHHHHc----CC
Confidence 345678999999864 667777887753 2489999999988777654 3432111111223333333331 02
Q ss_pred CceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 95 GTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 95 ~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
..+|+||-... ....++.+.+.|++||.++.-...
T Consensus 234 ~g~D~v~d~~g---~~~~~~~~~~~l~~~G~~v~~G~~ 268 (352)
T 3fpc_A 234 KGVDKVVIAGG---DVHTFAQAVKMIKPGSDIGNVNYL 268 (352)
T ss_dssp CCEEEEEECSS---CTTHHHHHHHHEEEEEEEEECCCC
T ss_pred CCCCEEEECCC---ChHHHHHHHHHHhcCCEEEEeccc
Confidence 36999984332 224577788899999999875543
No 322
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.88 E-value=0.0079 Score=47.47 Aligned_cols=100 Identities=18% Similarity=0.261 Sum_probs=64.5
Q ss_pred hcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEe----CCchHHHHHHhhcc
Q 029836 17 LINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFRE----GPALPLLDQLIQDE 91 (187)
Q Consensus 17 ~~~~~~vLeiG~g~-G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~----~d~~~~l~~~~~~~ 91 (187)
..+.++||-+|+|. |..+..+++..+ ..+|++++.+++..+.+++ .|. +.+ +-. .+..+.+....
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~~----lGa-~~v-i~~~~~~~~~~~~~~~~~--- 259 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAG-AKRIIAVDLNPDKFEKAKV----FGA-TDF-VNPNDHSEPISQVLSKMT--- 259 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHHH----TTC-CEE-ECGGGCSSCHHHHHHHHH---
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHH----hCC-ceE-EeccccchhHHHHHHHHh---
Confidence 34567999999763 667777888763 2389999999988877653 454 211 111 12222233322
Q ss_pred cCCCceeEEEEcCCCcccHHHHHHHHhcccCC-eEEEEeCc
Q 029836 92 KYHGTFDFVFVDADKDNYVNYHKRLIELVKVG-GVIGYDNT 131 (187)
Q Consensus 92 ~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~g-G~lv~~~~ 131 (187)
.+.+|+||--.. ....++.+.+.|+++ |.++.-..
T Consensus 260 --~~g~D~vid~~g---~~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 260 --NGGVDFSLECVG---NVGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp --TSCBSEEEECSC---CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred --CCCCCEEEECCC---CHHHHHHHHHHhhcCCcEEEEEcC
Confidence 347999985332 245678889999999 99887543
No 323
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.88 E-value=0.0065 Score=47.39 Aligned_cols=103 Identities=17% Similarity=0.107 Sum_probs=67.4
Q ss_pred hcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 17 LINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 17 ~~~~~~vLeiG~g~-G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
..+.++||-+|+|. |..+..+++... ..+|+++|.+++..+.+++ .|.. .+--...+..+.+.++.. ..
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~~~~~----lGa~-~~i~~~~~~~~~v~~~t~----g~ 238 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLALARE----VGAD-AAVKSGAGAADAIRELTG----GQ 238 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHHHHHH----TTCS-EEEECSTTHHHHHHHHHG----GG
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHH----cCCC-EEEcCCCcHHHHHHHHhC----CC
Confidence 44678999999864 777788887764 5799999999988877654 4542 221111222233333321 23
Q ss_pred ceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 96 TFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 96 ~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
.+|+||--.. ....++.+.+.|+++|.++.-...
T Consensus 239 g~d~v~d~~G---~~~~~~~~~~~l~~~G~iv~~G~~ 272 (345)
T 3jv7_A 239 GATAVFDFVG---AQSTIDTAQQVVAVDGHISVVGIH 272 (345)
T ss_dssp CEEEEEESSC---CHHHHHHHHHHEEEEEEEEECSCC
T ss_pred CCeEEEECCC---CHHHHHHHHHHHhcCCEEEEECCC
Confidence 7999885332 245788889999999999876543
No 324
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.88 E-value=0.0076 Score=47.59 Aligned_cols=101 Identities=20% Similarity=0.281 Sum_probs=64.1
Q ss_pred cCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEe--CCchHHHHHHhhcccCC
Q 029836 18 INAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFRE--GPALPLLDQLIQDEKYH 94 (187)
Q Consensus 18 ~~~~~vLeiG~g~-G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~--~d~~~~l~~~~~~~~~~ 94 (187)
.+.++||-+|+|. |..+..+++..+ ..+|+++|.+++..+.+++ .|...-+.... .+..+.+..+. .
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~~~v~~~~-----~ 263 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAG-ASRIIAIDINGEKFPKAKA----LGATDCLNPRELDKPVQDVITELT-----A 263 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHHH----TTCSEEECGGGCSSCHHHHHHHHH-----T
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----hCCcEEEccccccchHHHHHHHHh-----C
Confidence 4567999999763 667778888763 2489999999988877653 45421111110 12222333322 3
Q ss_pred CceeEEEEcCCCcccHHHHHHHHhcccCC-eEEEEeCc
Q 029836 95 GTFDFVFVDADKDNYVNYHKRLIELVKVG-GVIGYDNT 131 (187)
Q Consensus 95 ~~~D~v~~d~~~~~~~~~~~~~~~~L~~g-G~lv~~~~ 131 (187)
+.+|+||--.. ....++.+.+.|++| |.++.-..
T Consensus 264 ~g~Dvvid~~G---~~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 264 GGVDYSLDCAG---TAQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp SCBSEEEESSC---CHHHHHHHHHTBCTTTCEEEECCC
T ss_pred CCccEEEECCC---CHHHHHHHHHHhhcCCCEEEEECC
Confidence 47999985332 245678889999999 99987543
No 325
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=96.87 E-value=0.02 Score=44.48 Aligned_cols=105 Identities=19% Similarity=0.168 Sum_probs=67.4
Q ss_pred hcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 17 LINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 17 ~~~~~~vLeiG~g~-G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
..+.++||-+|+|. |..+..+++... ...++++|.+++.++.+++ .|...-+.....+..+....+.. ..
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~~~~k~~~a~~----lGa~~~i~~~~~~~~~~~~~~~~----~~ 228 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDISSEKLALAKS----FGAMQTFNSSEMSAPQMQSVLRE----LR 228 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHH----TTCSEEEETTTSCHHHHHHHHGG----GC
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcC-CcEEEEEechHHHHHHHHH----cCCeEEEeCCCCCHHHHHHhhcc----cC
Confidence 44678999999864 446667777764 4678999999988776654 55432222222333334333321 34
Q ss_pred ceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCcCC
Q 029836 96 TFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTLW 133 (187)
Q Consensus 96 ~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 133 (187)
.+|+|+-.. .....++.+.+++++||.+++-....
T Consensus 229 g~d~v~d~~---G~~~~~~~~~~~l~~~G~~v~~g~~~ 263 (346)
T 4a2c_A 229 FNQLILETA---GVPQTVELAVEIAGPHAQLALVGTLH 263 (346)
T ss_dssp SSEEEEECS---CSHHHHHHHHHHCCTTCEEEECCCCS
T ss_pred Ccccccccc---cccchhhhhhheecCCeEEEEEeccC
Confidence 678777433 23567788889999999998765443
No 326
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.84 E-value=0.0074 Score=48.04 Aligned_cols=105 Identities=13% Similarity=0.153 Sum_probs=66.1
Q ss_pred hcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCC-chHHHHHHhhcccCC
Q 029836 17 LINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGP-ALPLLDQLIQDEKYH 94 (187)
Q Consensus 17 ~~~~~~vLeiG~g~-G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d-~~~~l~~~~~~~~~~ 94 (187)
..+.++||-+|+|. |..+..+++.++ ..+|+++|.+++.++.+++ .|. +.+.....+ ..+.+..+.. .
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~G-a~~Vi~~~~~~~~~~~a~~----lGa-~~i~~~~~~~~~~~v~~~t~----g 252 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLG-AAVVIVGDLNPARLAHAKA----QGF-EIADLSLDTPLHEQIAALLG----E 252 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHH----TTC-EEEETTSSSCHHHHHHHHHS----S
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCC-CCeEEEEcCCHHHHHHHHH----cCC-cEEccCCcchHHHHHHHHhC----C
Confidence 44668999999864 777888888764 3489999999988877654 454 211111111 2223333210 2
Q ss_pred CceeEEEEcCCCcc------------cHHHHHHHHhcccCCeEEEEeCc
Q 029836 95 GTFDFVFVDADKDN------------YVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 95 ~~~D~v~~d~~~~~------------~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
..+|+||--..... ....++.+.+.|++||.+++-..
T Consensus 253 ~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 253 PEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp SCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 47999985433221 23468888999999999987544
No 327
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.84 E-value=0.0084 Score=46.52 Aligned_cols=102 Identities=11% Similarity=0.027 Sum_probs=65.3
Q ss_pred hhcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccC
Q 029836 16 KLINAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKY 93 (187)
Q Consensus 16 ~~~~~~~vLeiG~--g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~ 93 (187)
...+.++||-+|+ |.|..+..+++.. +.+|++++.+++..+.+. ++.|.. .++.....++...+....
T Consensus 146 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~---~~~g~~---~~~~~~~~~~~~~~~~~~-- 215 (336)
T 4b7c_A 146 QPKNGETVVISGAAGAVGSVAGQIARLK--GCRVVGIAGGAEKCRFLV---EELGFD---GAIDYKNEDLAAGLKREC-- 215 (336)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH---HTTCCS---EEEETTTSCHHHHHHHHC--
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH---HHcCCC---EEEECCCHHHHHHHHHhc--
Confidence 3456789999997 5677777788775 469999999988776652 233431 122221122222222111
Q ss_pred CCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 94 HGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 94 ~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.+.+|+||-... ...++.+.+.|+++|.++.-..
T Consensus 216 ~~~~d~vi~~~g----~~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 216 PKGIDVFFDNVG----GEILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp TTCEEEEEESSC----HHHHHHHHTTEEEEEEEEECCC
T ss_pred CCCceEEEECCC----cchHHHHHHHHhhCCEEEEEee
Confidence 357999886443 2468888999999999987443
No 328
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.84 E-value=0.0063 Score=48.03 Aligned_cols=99 Identities=15% Similarity=0.238 Sum_probs=64.5
Q ss_pred hcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEe-----CCchHHHHHHhhc
Q 029836 17 LINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFRE-----GPALPLLDQLIQD 90 (187)
Q Consensus 17 ~~~~~~vLeiG~g~-G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~-----~d~~~~l~~~~~~ 90 (187)
..+.++||-+|+|. |..+..+++..+ ..+|++++.+++..+.+++ .|. +. ++. .+..+.+.++.
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa-~~--vi~~~~~~~~~~~~i~~~t-- 258 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAG-ASRIIGVGTHKDKFPKAIE----LGA-TE--CLNPKDYDKPIYEVICEKT-- 258 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHHH----TTC-SE--EECGGGCSSCHHHHHHHHT--
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHHH----cCC-cE--EEecccccchHHHHHHHHh--
Confidence 34568999999863 667777887753 2489999999988877653 454 21 221 12222233321
Q ss_pred ccCCCceeEEEEcCCCcccHHHHHHHHhcccCC-eEEEEeCc
Q 029836 91 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVG-GVIGYDNT 131 (187)
Q Consensus 91 ~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~g-G~lv~~~~ 131 (187)
.+.+|+||--.. ....++.+.+.|+++ |.++.-..
T Consensus 259 ---~gg~Dvvid~~g---~~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 259 ---NGGVDYAVECAG---RIETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp ---TSCBSEEEECSC---CHHHHHHHHHTBCTTTCEEEECCC
T ss_pred ---CCCCCEEEECCC---CHHHHHHHHHHHhcCCCEEEEEcc
Confidence 347999985332 245678888999999 99887543
No 329
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.83 E-value=0.017 Score=45.57 Aligned_cols=96 Identities=15% Similarity=0.178 Sum_probs=64.1
Q ss_pred hcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 17 LINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 17 ~~~~~~vLeiG~g~-G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
..+.++||-+|+|. |..+..+++.. +.+|++++.+++..+.+++ .|. + .++.....+....+ .+
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~Vi~~~~~~~~~~~a~~----lGa-~--~vi~~~~~~~~~~~------~~ 256 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAM--GAHVVAFTTSEAKREAAKA----LGA-D--EVVNSRNADEMAAH------LK 256 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHH----HTC-S--EEEETTCHHHHHTT------TT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCC-c--EEeccccHHHHHHh------hc
Confidence 44678999999874 67777888875 4689999999998887764 343 2 22332223333333 35
Q ss_pred ceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 96 TFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 96 ~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.+|+||--.... ..++.+.+.|+++|.++.-.
T Consensus 257 g~Dvvid~~g~~---~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 257 SFDFILNTVAAP---HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp CEEEEEECCSSC---CCHHHHHTTEEEEEEEEECC
T ss_pred CCCEEEECCCCH---HHHHHHHHHhccCCEEEEec
Confidence 799998543322 23566788999999988643
No 330
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.82 E-value=0.0012 Score=49.72 Aligned_cols=53 Identities=9% Similarity=0.152 Sum_probs=41.1
Q ss_pred ceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCC--c---------------ccHHHHHHHHhcccCCeEEEEe
Q 029836 72 KIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADK--D---------------NYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 72 ~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~--~---------------~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
..+++++|+.+.+..+. .+++|+||+|++. . .....++.+.++|+++|.+++.
T Consensus 4 ~~~l~~gD~~~~l~~l~-----~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 4 INKIHQMNCFDFLDQVE-----NKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SSSEEECCHHHHHHHSC-----TTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCeEEechHHHHHHhcc-----ccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 45688999998888763 4689999999972 1 2245667778999999998875
No 331
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.81 E-value=0.012 Score=46.23 Aligned_cols=106 Identities=12% Similarity=-0.020 Sum_probs=67.5
Q ss_pred hhcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEe--CCchHHHHHHhhccc
Q 029836 16 KLINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFRE--GPALPLLDQLIQDEK 92 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~--~d~~~~l~~~~~~~~ 92 (187)
...+.++||-+|+|. |..+..+++..+ ..+|+++|.+++..+.+++. .. .-+.... .+..++...+.+..
T Consensus 176 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~l-~~----~~~~~~~~~~~~~~~~~~v~~~t- 248 (363)
T 3m6i_A 176 GVRLGDPVLICGAGPIGLITMLCAKAAG-ACPLVITDIDEGRLKFAKEI-CP----EVVTHKVERLSAEESAKKIVESF- 248 (363)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHHTT-CCSEEEEESCHHHHHHHHHH-CT----TCEEEECCSCCHHHHHHHHHHHT-
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHh-ch----hcccccccccchHHHHHHHHHHh-
Confidence 345678999999864 667788888763 23499999999999888764 21 2233321 12233333332211
Q ss_pred CCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 93 YHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 93 ~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
....+|+||--.. ....++.+.+.|++||.++.-..
T Consensus 249 ~g~g~Dvvid~~g---~~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 249 GGIEPAVALECTG---VESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp SSCCCSEEEECSC---CHHHHHHHHHHSCTTCEEEECCC
T ss_pred CCCCCCEEEECCC---ChHHHHHHHHHhcCCCEEEEEcc
Confidence 1347999985332 24567888899999999987543
No 332
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.79 E-value=0.0054 Score=47.57 Aligned_cols=97 Identities=12% Similarity=0.083 Sum_probs=62.4
Q ss_pred hcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEe---CCchHHHHHHhhcc
Q 029836 17 LINAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFRE---GPALPLLDQLIQDE 91 (187)
Q Consensus 17 ~~~~~~vLeiG~--g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~---~d~~~~l~~~~~~~ 91 (187)
..+.+++|.+|+ |.|..+..++... +.+|++++.+++..+.++ +.+. ...+-. .+..+.+....
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~----~~g~--~~~~d~~~~~~~~~~~~~~~--- 211 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYLK----QIGF--DAAFNYKTVNSLEEALKKAS--- 211 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HTTC--SEEEETTSCSCHHHHHHHHC---
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH----hcCC--cEEEecCCHHHHHHHHHHHh---
Confidence 345689999997 5666777777664 469999999988776653 2343 122211 22222333321
Q ss_pred cCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 92 KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 92 ~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.+.+|+++.... ...+..+.+.|++||.+++-.
T Consensus 212 --~~~~d~vi~~~g----~~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 212 --PDGYDCYFDNVG----GEFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp --TTCEEEEEESSC----HHHHHHHHTTEEEEEEEEECC
T ss_pred --CCCCeEEEECCC----hHHHHHHHHHHhcCCEEEEEe
Confidence 347999986543 235788889999999998644
No 333
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.78 E-value=0.0017 Score=50.58 Aligned_cols=54 Identities=17% Similarity=0.247 Sum_probs=42.3
Q ss_pred CceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCC--c---------------ccHHHHHHHHhcccCCeEEEEe
Q 029836 71 HKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADK--D---------------NYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 71 ~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~--~---------------~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
.+.+++++|+.+.++.+. .+++|+|++|++. . .....++.+.++|++||.+++.
T Consensus 13 ~~~~ii~gD~~~~l~~l~-----~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~ 83 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFP-----EESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVD 83 (323)
T ss_dssp SSEEEEESCHHHHGGGSC-----SSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhCC-----CCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEE
Confidence 468899999988776553 5689999999872 1 2456777888999999998873
No 334
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.78 E-value=0.004 Score=49.31 Aligned_cols=103 Identities=20% Similarity=0.299 Sum_probs=66.0
Q ss_pred hcCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEE--eCCchHHHHHHhhcccC
Q 029836 17 LINAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFR--EGPALPLLDQLIQDEKY 93 (187)
Q Consensus 17 ~~~~~~vLeiG~g-~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~--~~d~~~~l~~~~~~~~~ 93 (187)
..+.++||-+|+| .|..+..+++..+ ..+|+++|.+++.++.++ +.|...-+... ..+..+.+..+.
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~vi~~~~~~~~~~~~i~~~~----- 260 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAG-ASRIIGIDIDSKKYETAK----KFGVNEFVNPKDHDKPIQEVIVDLT----- 260 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHT-CSCEEEECSCTTHHHHHH----TTTCCEEECGGGCSSCHHHHHHHHT-----
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HcCCcEEEccccCchhHHHHHHHhc-----
Confidence 3456799999986 3677777887753 248999999998887665 34542111111 122223333332
Q ss_pred CCceeEEEEcCCCcccHHHHHHHHhcccCC-eEEEEeCcC
Q 029836 94 HGTFDFVFVDADKDNYVNYHKRLIELVKVG-GVIGYDNTL 132 (187)
Q Consensus 94 ~~~~D~v~~d~~~~~~~~~~~~~~~~L~~g-G~lv~~~~~ 132 (187)
.+.+|+||--. .....++.+.+.|++| |.+++-...
T Consensus 261 ~gg~D~vid~~---g~~~~~~~~~~~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 261 DGGVDYSFECI---GNVSVMRAALECCHKGWGTSVIVGVA 297 (378)
T ss_dssp TSCBSEEEECS---CCHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred CCCCCEEEECC---CCHHHHHHHHHHhhccCCEEEEEccc
Confidence 34899998533 2346688889999996 999875543
No 335
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.77 E-value=0.0095 Score=47.00 Aligned_cols=99 Identities=18% Similarity=0.281 Sum_probs=64.1
Q ss_pred hcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEe-----CCchHHHHHHhhc
Q 029836 17 LINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFRE-----GPALPLLDQLIQD 90 (187)
Q Consensus 17 ~~~~~~vLeiG~g~-G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~-----~d~~~~l~~~~~~ 90 (187)
..+.++||-+|+|. |..+..+++..+ ..+|++++.+++..+.+++ .|. +. ++. .+..+.+..+.
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~~----lGa-~~--vi~~~~~~~~~~~~~~~~~-- 258 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAG-AARIIGVDINKDKFAKAKE----VGA-TE--CVNPQDYKKPIQEVLTEMS-- 258 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHHH----TTC-SE--EECGGGCSSCHHHHHHHHT--
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----hCC-ce--EecccccchhHHHHHHHHh--
Confidence 34568999999764 667777888763 2389999999988877653 454 21 221 12222333331
Q ss_pred ccCCCceeEEEEcCCCcccHHHHHHHHhcccCC-eEEEEeCc
Q 029836 91 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVG-GVIGYDNT 131 (187)
Q Consensus 91 ~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~g-G~lv~~~~ 131 (187)
.+.+|+||--.. ....++.+.+.|+++ |.++.-..
T Consensus 259 ---~~g~D~vid~~g---~~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 259 ---NGGVDFSFEVIG---RLDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp ---TSCBSEEEECSC---CHHHHHHHHHHBCTTTCEEEECSC
T ss_pred ---CCCCcEEEECCC---CHHHHHHHHHHhhcCCcEEEEecc
Confidence 347999985332 245678888999999 99887543
No 336
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=96.74 E-value=0.033 Score=43.50 Aligned_cols=118 Identities=11% Similarity=0.094 Sum_probs=76.0
Q ss_pred HHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcC--------------------CC
Q 029836 11 FSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAG--------------------VA 70 (187)
Q Consensus 11 l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~--------------------~~ 70 (187)
+..++...+...|+.+|||...-...+....+ +.+++-||. |+.++.-++.+++.+ ..
T Consensus 89 v~~fl~~~~~~qVV~LGaGlDTr~~RL~~~~~-~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~ 166 (334)
T 1rjd_A 89 ILEFLVANEKVQVVNLGCGSDLRMLPLLQMFP-HLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQ 166 (334)
T ss_dssp HHHHHHHCSSEEEEEETCTTCCTHHHHHHHCT-TEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEEC
T ss_pred HHHHHHHCCCcEEEEeCCCCccHHHHhcCcCC-CCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCC
Confidence 33334335567999999999998888776544 567777777 888888788877652 13
Q ss_pred CceEEEeCCchH--HHHHHhhcccCCCceeEEEEcCC-----CcccHHHHHHHHhcccCCeEE-EEeCc
Q 029836 71 HKIDFREGPALP--LLDQLIQDEKYHGTFDFVFVDAD-----KDNYVNYHKRLIELVKVGGVI-GYDNT 131 (187)
Q Consensus 71 ~~i~~~~~d~~~--~l~~~~~~~~~~~~~D~v~~d~~-----~~~~~~~~~~~~~~L~~gG~l-v~~~~ 131 (187)
.+.+++..|..+ ++..+.....+.+...++++-+. .+....+++.+.... ++|.+ +++-+
T Consensus 167 ~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i 234 (334)
T 1rjd_A 167 GRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPI 234 (334)
T ss_dssp SSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEEC
T ss_pred CceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEecc
Confidence 678999999876 33332222111345667776654 344566777777766 56655 45433
No 337
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=96.72 E-value=0.0037 Score=48.54 Aligned_cols=100 Identities=14% Similarity=0.069 Sum_probs=63.3
Q ss_pred cCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 18 INAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 18 ~~~~~vLeiG~--g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
.+.++||-+|+ |.|..+..+++.. +.+|++++.+++.++.+++ .|. + .++..+..++...+.... ...
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga-~--~~~~~~~~~~~~~~~~~~-~~~ 216 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMK--GAHTIAVASTDEKLKIAKE----YGA-E--YLINASKEDILRQVLKFT-NGK 216 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTC-S--EEEETTTSCHHHHHHHHT-TTS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCC-c--EEEeCCCchHHHHHHHHh-CCC
Confidence 45689999993 5677777788775 4799999999888776654 443 1 122222222222221111 134
Q ss_pred ceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 96 TFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 96 ~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.+|+||-.... ..++.+.+.|++||.++.-..
T Consensus 217 g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 217 GVDASFDSVGK----DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp CEEEEEECCGG----GGHHHHHHHEEEEEEEEECCC
T ss_pred CceEEEECCCh----HHHHHHHHHhccCCEEEEEcC
Confidence 79999854432 457778889999999987543
No 338
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.72 E-value=0.0041 Score=48.46 Aligned_cols=101 Identities=15% Similarity=0.039 Sum_probs=62.6
Q ss_pred hcCCCEEEEEccc--ccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCC
Q 029836 17 LINAKNTMEIGVF--TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYH 94 (187)
Q Consensus 17 ~~~~~~vLeiG~g--~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~ 94 (187)
..+.++||-+|+| .|..+..+++.. +.+|++++.+++..+.+++ .|...-+.....+..+.+.... ..
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lga~~~~~~~~~~~~~~~~~~~----~~ 211 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQIL--NFRLIAVTRNNKHTEELLR----LGAAYVIDTSTAPLYETVMELT----NG 211 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHH----HTCSEEEETTTSCHHHHHHHHT----TT
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----CCCcEEEeCCcccHHHHHHHHh----CC
Confidence 3456899999986 677778888765 4699999999988887765 3431111111122222222221 02
Q ss_pred CceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 95 GTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 95 ~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
..+|+||-.... .......+.|++||.++.-..
T Consensus 212 ~g~Dvvid~~g~----~~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 212 IGADAAIDSIGG----PDGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp SCEEEEEESSCH----HHHHHHHHTEEEEEEEEECCC
T ss_pred CCCcEEEECCCC----hhHHHHHHHhcCCCEEEEEee
Confidence 479999864331 223344589999999987544
No 339
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=96.69 E-value=0.012 Score=45.89 Aligned_cols=99 Identities=13% Similarity=-0.030 Sum_probs=64.2
Q ss_pred hcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEe---CCchHHHHHHhhcc
Q 029836 17 LINAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFRE---GPALPLLDQLIQDE 91 (187)
Q Consensus 17 ~~~~~~vLeiG~--g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~---~d~~~~l~~~~~~~ 91 (187)
..+.++||.+|+ |.|..+..+++.. +.+|++++.+++..+.+++ .|.. ..+-. .+..+.+....
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~~~~~~~~~~~~----~g~~--~~~d~~~~~~~~~~~~~~~--- 235 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAM--GYRVLGIDGGEGKEELFRS----IGGE--VFIDFTKEKDIVGAVLKAT--- 235 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSTTHHHHHHH----TTCC--EEEETTTCSCHHHHHHHHH---
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--CCcEEEEcCCHHHHHHHHH----cCCc--eEEecCccHhHHHHHHHHh---
Confidence 345689999998 5677777777765 4699999998887766543 3431 11211 12222333321
Q ss_pred cCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 92 KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 92 ~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.+.+|+|+.... ....++.+.+.|+++|.++.-..
T Consensus 236 --~~~~D~vi~~~g---~~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 236 --DGGAHGVINVSV---SEAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp --TSCEEEEEECSS---CHHHHHHHTTSEEEEEEEEECCC
T ss_pred --CCCCCEEEECCC---cHHHHHHHHHHHhcCCEEEEEeC
Confidence 237999986542 34567888999999999987543
No 340
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=96.66 E-value=0.011 Score=46.66 Aligned_cols=99 Identities=18% Similarity=0.273 Sum_probs=64.1
Q ss_pred hcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEe-----CCchHHHHHHhhc
Q 029836 17 LINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFRE-----GPALPLLDQLIQD 90 (187)
Q Consensus 17 ~~~~~~vLeiG~g~-G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~-----~d~~~~l~~~~~~ 90 (187)
..+.++||-+|+|. |..+..+++..+ ..+|++++.+++..+.+++ .|. +. ++. .+..+.+.++.
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~~~~~~~~~~~~----lGa-~~--vi~~~~~~~~~~~~v~~~~-- 257 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVDINKDKFARAKE----FGA-TE--CINPQDFSKPIQEVLIEMT-- 257 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHHH----HTC-SE--EECGGGCSSCHHHHHHHHT--
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----cCC-ce--EeccccccccHHHHHHHHh--
Confidence 34567999999764 667777887753 2389999999998887754 343 21 221 12222333331
Q ss_pred ccCCCceeEEEEcCCCcccHHHHHHHHhcccCC-eEEEEeCc
Q 029836 91 EKYHGTFDFVFVDADKDNYVNYHKRLIELVKVG-GVIGYDNT 131 (187)
Q Consensus 91 ~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~g-G~lv~~~~ 131 (187)
.+.+|+||--.. ....++.+.+.|+++ |.++.-..
T Consensus 258 ---~~g~D~vid~~g---~~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 258 ---DGGVDYSFECIG---NVKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp ---TSCBSEEEECSC---CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred ---CCCCCEEEECCC---cHHHHHHHHHhhccCCcEEEEEec
Confidence 347999985332 245678889999999 99987543
No 341
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=96.64 E-value=0.0062 Score=47.51 Aligned_cols=100 Identities=12% Similarity=0.023 Sum_probs=63.3
Q ss_pred hcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCC
Q 029836 17 LINAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYH 94 (187)
Q Consensus 17 ~~~~~~vLeiG~--g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~ 94 (187)
..+.++||-+|+ +.|..+..+++.. +.+|++++.+++..+.+++ .|. +.+--...+..+.+.... ..
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga-~~v~~~~~~~~~~v~~~~----~~ 225 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGM--GAKVIAVVNRTAATEFVKS----VGA-DIVLPLEEGWAKAVREAT----GG 225 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHH----HTC-SEEEESSTTHHHHHHHHT----TT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCC-cEEecCchhHHHHHHHHh----CC
Confidence 345689999996 5677888888876 4699999999988877765 343 221111122222222221 02
Q ss_pred CceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 95 GTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 95 ~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
..+|+||-.... ..++.+.+.|+++|.++.-..
T Consensus 226 ~g~Dvvid~~g~----~~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 226 AGVDMVVDPIGG----PAFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp SCEEEEEESCC------CHHHHHHTEEEEEEEEEC--
T ss_pred CCceEEEECCch----hHHHHHHHhhcCCCEEEEEEc
Confidence 379999864432 246778889999999987543
No 342
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=96.64 E-value=0.013 Score=45.50 Aligned_cols=101 Identities=15% Similarity=0.045 Sum_probs=64.3
Q ss_pred hhcCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCC
Q 029836 16 KLINAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYH 94 (187)
Q Consensus 16 ~~~~~~~vLeiG~g-~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~ 94 (187)
...+.++||-+|+| .|..+..+++.. +.+|++++.+++..+.+++ .|. + .++.-...++...+.+. .
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa-~--~~~d~~~~~~~~~~~~~---~ 228 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAM--GLNVVAVDIGDEKLELAKE----LGA-D--LVVNPLKEDAAKFMKEK---V 228 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH----TTC-S--EEECTTTSCHHHHHHHH---H
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----CCC-C--EEecCCCccHHHHHHHH---h
Confidence 34567899999985 466777788775 4699999999988876653 443 1 12221111222222111 1
Q ss_pred CceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 95 GTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 95 ~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
+.+|+||-... ....++.+.+.|+++|.++.-..
T Consensus 229 ~~~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 229 GGVHAAVVTAV---SKPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp SSEEEEEESSC---CHHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCEEEECCC---CHHHHHHHHHHhhcCCEEEEecc
Confidence 46999986432 24567788899999999986443
No 343
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.63 E-value=0.0039 Score=49.11 Aligned_cols=99 Identities=14% Similarity=0.074 Sum_probs=64.5
Q ss_pred hcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeC---CchHHHHHHhhccc
Q 029836 17 LINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREG---PALPLLDQLIQDEK 92 (187)
Q Consensus 17 ~~~~~~vLeiG~g~-G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~---d~~~~l~~~~~~~~ 92 (187)
..+.++||-+|+|. |..+..+++.. +.+|++++.+++.++.+++ .|.. . ++.. +..+.+..+..
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~-~--vi~~~~~~~~~~v~~~~~--- 254 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKAT--GAEVIVTSSSREKLDRAFA----LGAD-H--GINRLEEDWVERVYALTG--- 254 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----HTCS-E--EEETTTSCHHHHHHHHHT---
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEecCchhHHHHHH----cCCC-E--EEcCCcccHHHHHHHHhC---
Confidence 34568999999774 66777788875 4699999999988877654 3442 1 2222 22222333221
Q ss_pred CCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 93 YHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 93 ~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
...+|+||-.... ..++.+.+.|++||.++.-...
T Consensus 255 -g~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 255 -DRGADHILEIAGG----AGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp -TCCEEEEEEETTS----SCHHHHHHHEEEEEEEEEECCC
T ss_pred -CCCceEEEECCCh----HHHHHHHHHhhcCCEEEEEecC
Confidence 2379999854432 2366778899999999876544
No 344
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.61 E-value=0.012 Score=47.06 Aligned_cols=102 Identities=6% Similarity=-0.002 Sum_probs=60.3
Q ss_pred cCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEe---CCchHHHHHHhhcccC
Q 029836 18 INAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFRE---GPALPLLDQLIQDEKY 93 (187)
Q Consensus 18 ~~~~~vLeiG~g~-G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~---~d~~~~l~~~~~~~~~ 93 (187)
.+.++||-+|+|. |..+..+++..+ ..+|+++|.+++..+.+++ .|. + .++. .+..+.+..+. .
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~~----lGa-~--~vi~~~~~~~~~~i~~~t----~ 279 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAG-ASKVILSEPSEVRRNLAKE----LGA-D--HVIDPTKENFVEAVLDYT----N 279 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHHH----HTC-S--EEECTTTSCHHHHHHHHT----T
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----cCC-C--EEEcCCCCCHHHHHHHHh----C
Confidence 3567999999853 667777887763 3499999999988877754 343 1 2222 22222333331 0
Q ss_pred CCceeEEEEcCCCc--ccHHHHHHHHhcccCCeEEEEeCc
Q 029836 94 HGTFDFVFVDADKD--NYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 94 ~~~~D~v~~d~~~~--~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
...+|+||-..... .....++.+++.+++||.++.-..
T Consensus 280 g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 280 GLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp TCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred CCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 23699998543222 122223333344499999987544
No 345
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.59 E-value=0.003 Score=49.11 Aligned_cols=54 Identities=11% Similarity=0.108 Sum_probs=41.5
Q ss_pred CceEEE-eCCchHHHHHHhhcccCCCceeEEEEcCCCc----------c----cHHHHHHHHhcccCCeEEEEe
Q 029836 71 HKIDFR-EGPALPLLDQLIQDEKYHGTFDFVFVDADKD----------N----YVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 71 ~~i~~~-~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~~----------~----~~~~~~~~~~~L~~gG~lv~~ 129 (187)
...+++ ++|+.+.+..+. .+++|+||+|++.. . ....+..+.++|++||.+++.
T Consensus 37 ~~~~l~i~gD~l~~L~~l~-----~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 37 TTRHVYDVCDCLDTLAKLP-----DDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp CEEEEEEECCHHHHHHTSC-----TTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccceEEECCcHHHHHHhCc-----cCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 356788 999999887663 46899999999721 1 245667778999999999874
No 346
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.59 E-value=0.0068 Score=47.21 Aligned_cols=70 Identities=11% Similarity=-0.061 Sum_probs=53.3
Q ss_pred CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeE
Q 029836 20 AKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDF 99 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~ 99 (187)
..+++|+.||.|..++.+..+ + -..+.++|+++.+++..+.|+.... ++|..++.+.. -..+|+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G-~~~v~~~e~d~~a~~t~~~N~~~~~--------~~Di~~~~~~~------~~~~D~ 74 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-G-AECVYSNEWDKYAQEVYEMNFGEKP--------EGDITQVNEKT------IPDHDI 74 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-T-CEEEEEECCCHHHHHHHHHHHSCCC--------BSCGGGSCGGG------SCCCSE
T ss_pred CCcEEEECCCcCHHHHHHHHC-C-CeEEEEEeCCHHHHHHHHHHcCCCC--------cCCHHHcCHhh------CCCCCE
Confidence 468999999999999998865 2 3568899999999999888874321 57776654332 346899
Q ss_pred EEEcCC
Q 029836 100 VFVDAD 105 (187)
Q Consensus 100 v~~d~~ 105 (187)
|+.+.+
T Consensus 75 l~~gpP 80 (327)
T 2c7p_A 75 LCAGFP 80 (327)
T ss_dssp EEEECC
T ss_pred EEECCC
Confidence 999865
No 347
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=96.55 E-value=0.0044 Score=47.94 Aligned_cols=100 Identities=9% Similarity=-0.019 Sum_probs=63.4
Q ss_pred cCCCEEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 18 INAKNTMEIG--VFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 18 ~~~~~vLeiG--~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
.+.++||-+| .+.|..+..+++.. +.+|++++.+++.++.+++ .|.. .++..+..++...+.+.. ...
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~~~~~~-~~~ 208 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKAL--GAKLIGTVSSPEKAAHAKA----LGAW---ETIDYSHEDVAKRVLELT-DGK 208 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHH----HTCS---EEEETTTSCHHHHHHHHT-TTC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCC---EEEeCCCccHHHHHHHHh-CCC
Confidence 4567999998 35677777788765 4699999999988877764 3431 122222222222222111 024
Q ss_pred ceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 96 TFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 96 ~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.+|+||-.... ..+..+.+.|++||.++.-..
T Consensus 209 g~Dvvid~~g~----~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 209 KCPVVYDGVGQ----DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp CEEEEEESSCG----GGHHHHHTTEEEEEEEEECCC
T ss_pred CceEEEECCCh----HHHHHHHHHhcCCCEEEEEec
Confidence 79998864432 456778899999999987543
No 348
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=96.55 E-value=0.013 Score=46.17 Aligned_cols=97 Identities=19% Similarity=0.156 Sum_probs=62.9
Q ss_pred CCCEEEEEc-c-cccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCc
Q 029836 19 NAKNTMEIG-V-FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGT 96 (187)
Q Consensus 19 ~~~~vLeiG-~-g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~ 96 (187)
+.++||-+| + +.|..+..+++.+. +.+|++++.+++..+.+++ .|. +. ++... .++...+.+.. .+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~~~~~~~~~~~----lGa-d~--vi~~~-~~~~~~v~~~~--~~g 239 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPETQEWVKS----LGA-HH--VIDHS-KPLAAEVAALG--LGA 239 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECSSHHHHHHHHH----TTC-SE--EECTT-SCHHHHHHTTC--SCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHH----cCC-CE--EEeCC-CCHHHHHHHhc--CCC
Confidence 456899998 3 45778888888643 5799999999988777654 453 21 22211 12223332211 457
Q ss_pred eeEEEEcCCCcccHHHHHHHHhcccCCeEEEEe
Q 029836 97 FDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 97 ~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+|+||-.. .....++.+.+.|+++|.++.-
T Consensus 240 ~Dvvid~~---g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 240 PAFVFSTT---HTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEEEECS---CHHHHHHHHHHHSCTTCEEEEC
T ss_pred ceEEEECC---CchhhHHHHHHHhcCCCEEEEE
Confidence 99888532 2345678888999999999864
No 349
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.52 E-value=0.028 Score=37.79 Aligned_cols=93 Identities=6% Similarity=-0.022 Sum_probs=57.4
Q ss_pred CEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchH--HHHHHhhcccCCCce
Q 029836 21 KNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDEKYHGTF 97 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~--~l~~~~~~~~~~~~~ 97 (187)
.+|+-+|+ |..+..+++.+. .+..|+++|.+++.++.+++ ..+.++.+|+.+ .+.... -...
T Consensus 8 ~~viIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~--------~g~~~i~gd~~~~~~l~~a~-----i~~a 72 (140)
T 3fwz_A 8 NHALLVGY--GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE--------RGVRAVLGNAANEEIMQLAH-----LECA 72 (140)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TTCEEEESCTTSHHHHHHTT-----GGGC
T ss_pred CCEEEECc--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--------cCCCEEECCCCCHHHHHhcC-----cccC
Confidence 57888887 555555554442 25789999999988776553 245678888754 344321 2478
Q ss_pred eEEEEcCCCcccHHHHHHHHhcccCCeEEEE
Q 029836 98 DFVFVDADKDNYVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 98 D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
|+|++-.+........-...+.+.++..++.
T Consensus 73 d~vi~~~~~~~~n~~~~~~a~~~~~~~~iia 103 (140)
T 3fwz_A 73 KWLILTIPNGYEAGEIVASARAKNPDIEIIA 103 (140)
T ss_dssp SEEEECCSCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred CEEEEECCChHHHHHHHHHHHHHCCCCeEEE
Confidence 9998765433222223334566677777664
No 350
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=96.51 E-value=0.027 Score=38.80 Aligned_cols=114 Identities=10% Similarity=0.088 Sum_probs=74.4
Q ss_pred HHHHHHHHhhcC--CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHH
Q 029836 8 AQFFSMLLKLIN--AKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLD 85 (187)
Q Consensus 8 ~~~l~~l~~~~~--~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~ 85 (187)
...|...+.... +.-|||+|-|.|..=-.+-+.+| +-+++.+|-.-.... ...++.-.+++||..+.++
T Consensus 27 R~~L~~a~~~v~~~~GpVlElGLGNGRTydHLRe~~P-~R~I~vfDR~~~~hp--------~~~P~~e~~ilGdi~~tL~ 97 (174)
T 3iht_A 27 RACLEHAIAQTAGLSGPVYELGLGNGRTYHHLRQHVQ-GREIYVFERAVASHP--------DSTPPEAQLILGDIRETLP 97 (174)
T ss_dssp HHHHHHHHHHTTTCCSCEEEECCTTCHHHHHHHHHCC-SSCEEEEESSCCCCG--------GGCCCGGGEEESCHHHHHH
T ss_pred HHHHHHHHHHhcCCCCceEEecCCCChhHHHHHHhCC-CCcEEEEEeeeccCC--------CCCCchHheecccHHHHHH
Confidence 344555555443 45899999999999888999998 788999996432110 0123556789999999888
Q ss_pred HHhhcccCCCceeEEEEcCCC--ccc----HHHH-HHHHhcccCCeEEEEeCcC
Q 029836 86 QLIQDEKYHGTFDFVFVDADK--DNY----VNYH-KRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 86 ~~~~~~~~~~~~D~v~~d~~~--~~~----~~~~-~~~~~~L~~gG~lv~~~~~ 132 (187)
...+.- ..+.-++..|... ++. ..++ ..+.++|.+||+++-..-+
T Consensus 98 ~~~~r~--g~~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~pl 149 (174)
T 3iht_A 98 ATLERF--GATASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSSDRM 149 (174)
T ss_dssp HHHHHH--CSCEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESSCC
T ss_pred HHHHhc--CCceEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCCcc
Confidence 743211 3466677777541 111 1222 3445899999999965544
No 351
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=96.50 E-value=0.007 Score=47.41 Aligned_cols=100 Identities=15% Similarity=0.158 Sum_probs=63.5
Q ss_pred hcCCCEEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCC
Q 029836 17 LINAKNTMEIG--VFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYH 94 (187)
Q Consensus 17 ~~~~~~vLeiG--~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~ 94 (187)
..+.++||-+| .|.|..+..+++.. +.+|++++.+++..+.+++ .|...-+.....+..+.+.... .
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~~~~~~~~~-----~ 233 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAF--GAEVYATAGSTGKCEACER----LGAKRGINYRSEDFAAVIKAET-----G 233 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHH-----S
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCCEEEeCCchHHHHHHHHHh-----C
Confidence 34567999995 34677777888775 4799999999988877765 3431111111122222233221 3
Q ss_pred CceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 95 GTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 95 ~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
+.+|+||-.... ..+..+.+.|+++|.++.-..
T Consensus 234 ~g~Dvvid~~g~----~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 234 QGVDIILDMIGA----AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp SCEEEEEESCCG----GGHHHHHHTEEEEEEEEECCC
T ss_pred CCceEEEECCCH----HHHHHHHHHhccCCEEEEEEe
Confidence 579998865432 256778889999999987543
No 352
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=96.47 E-value=0.0085 Score=46.46 Aligned_cols=99 Identities=12% Similarity=0.154 Sum_probs=62.3
Q ss_pred cCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 18 INAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 18 ~~~~~vLeiG~--g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
.+.++||-+|+ |.|..+..+++.. +.+|++++.+++..+.+++ .+...-+.....+..+.+..... ..
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~----~g~~~~~d~~~~~~~~~i~~~~~----~~ 213 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHL--GATVIGTVSTEEKAETARK----LGCHHTINYSTQDFAEVVREITG----GK 213 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHHT----TC
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCCEEEECCCHHHHHHHHHHhC----CC
Confidence 45679999994 6777778888765 4799999999887776654 24311111111122222222211 24
Q ss_pred ceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 96 TFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 96 ~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.+|++|-.... ..++.+.+.|+++|.++.-.
T Consensus 214 ~~d~vi~~~g~----~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 214 GVDVVYDSIGK----DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp CEEEEEECSCT----TTHHHHHHTEEEEEEEEECC
T ss_pred CCeEEEECCcH----HHHHHHHHhhccCCEEEEEe
Confidence 69999865432 45677889999999988744
No 353
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=96.45 E-value=0.0088 Score=46.56 Aligned_cols=98 Identities=12% Similarity=0.048 Sum_probs=63.9
Q ss_pred hcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeC---CchHHHHHHhhcc
Q 029836 17 LINAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREG---PALPLLDQLIQDE 91 (187)
Q Consensus 17 ~~~~~~vLeiG~--g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~---d~~~~l~~~~~~~ 91 (187)
..+.++||-+|+ |.|..+..+++.. +.+|++++.+++..+.+++ +.|. ...+-.. +..+.+....
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~---~~g~--~~~~d~~~~~~~~~~~~~~~--- 222 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMM--GCYVVGSAGSKEKVDLLKT---KFGF--DDAFNYKEESDLTAALKRCF--- 222 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH---TSCC--SEEEETTSCSCSHHHHHHHC---
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---HcCC--ceEEecCCHHHHHHHHHHHh---
Confidence 345689999996 5677777788765 4699999999887766642 2343 1112111 2333333331
Q ss_pred cCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 92 KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 92 ~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.+.+|+|+-... ...++.+.+.|++||.++.-.
T Consensus 223 --~~~~d~vi~~~g----~~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 223 --PNGIDIYFENVG----GKMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp --TTCEEEEEESSC----HHHHHHHHTTEEEEEEEEECC
T ss_pred --CCCCcEEEECCC----HHHHHHHHHHHhcCCEEEEEc
Confidence 246999986543 246788889999999998743
No 354
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.39 E-value=0.0045 Score=47.47 Aligned_cols=54 Identities=13% Similarity=0.116 Sum_probs=39.8
Q ss_pred CceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCCc---c--------------------cHHHHHHHHhcccCCeEEE
Q 029836 71 HKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKD---N--------------------YVNYHKRLIELVKVGGVIG 127 (187)
Q Consensus 71 ~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~~---~--------------------~~~~~~~~~~~L~~gG~lv 127 (187)
.+++++++|+.+.++.+. +++||+|+.|++.- . +..++..+.++|+|||.++
T Consensus 20 ~~~~i~~gD~~~~l~~l~-----~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~ 94 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFP-----EASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLV 94 (297)
T ss_dssp -CEEEEESCHHHHHTTSC-----TTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred cCCEEEECcHHHHHhhCC-----CCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEE
Confidence 467999999998776552 46899999998721 1 1235567789999999887
Q ss_pred Ee
Q 029836 128 YD 129 (187)
Q Consensus 128 ~~ 129 (187)
+.
T Consensus 95 i~ 96 (297)
T 2zig_A 95 IV 96 (297)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 355
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.38 E-value=0.0063 Score=47.06 Aligned_cols=99 Identities=13% Similarity=0.032 Sum_probs=61.7
Q ss_pred cCCCEEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 18 INAKNTMEIG--VFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 18 ~~~~~vLeiG--~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
.+.++||-+| +|.|..+..+++.. +.+|++++.+++..+.+++ .+. .. ++..+..+....+.... ...
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~----~g~--~~-~~~~~~~~~~~~~~~~~-~~~ 208 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGTAQKAQSALK----AGA--WQ-VINYREEDLVERLKEIT-GGK 208 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHH----HTC--SE-EEETTTSCHHHHHHHHT-TTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCC--CE-EEECCCccHHHHHHHHh-CCC
Confidence 3568999999 45666677777664 4699999999888777654 233 11 22211112222221110 023
Q ss_pred ceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 96 TFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 96 ~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.+|++|.... ...++.+.+.|+++|.++.-.
T Consensus 209 ~~D~vi~~~g----~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 209 KVRVVYDSVG----RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp CEEEEEECSC----GGGHHHHHHTEEEEEEEEECC
T ss_pred CceEEEECCc----hHHHHHHHHHhcCCCEEEEEe
Confidence 6999986554 345678889999999988644
No 356
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=96.27 E-value=0.018 Score=44.99 Aligned_cols=101 Identities=13% Similarity=0.020 Sum_probs=62.7
Q ss_pred hcCC--CEEEEEcc--cccHHHHHHHhhCCCCC-EEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcc
Q 029836 17 LINA--KNTMEIGV--FTGYSLLATALAIPDDG-KILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDE 91 (187)
Q Consensus 17 ~~~~--~~vLeiG~--g~G~~~~~l~~~~~~~~-~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~ 91 (187)
..+. ++||-+|+ |.|..+..+++.. +. +|++++.+++..+.+++. .|.. . ++..+..+....+....
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~--Ga~~Vi~~~~~~~~~~~~~~~---~g~~--~-~~d~~~~~~~~~~~~~~ 227 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFL--GCSRVVGICGTHEKCILLTSE---LGFD--A-AINYKKDNVAEQLRESC 227 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHT---SCCS--E-EEETTTSCHHHHHHHHC
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHC--CCCeEEEEeCCHHHHHHHHHH---cCCc--e-EEecCchHHHHHHHHhc
Confidence 4456 89999996 5566677777764 45 999999998776655432 3431 1 22211112222221111
Q ss_pred cCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 92 KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 92 ~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.+.+|+++-... ...++.+.+.|++||.++.-..
T Consensus 228 --~~~~d~vi~~~G----~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 228 --PAGVDVYFDNVG----GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp --TTCEEEEEESCC----HHHHHHHHHTEEEEEEEEECCC
T ss_pred --CCCCCEEEECCC----HHHHHHHHHHhccCcEEEEECC
Confidence 237999986543 2667888899999999987443
No 357
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=96.26 E-value=0.013 Score=45.68 Aligned_cols=99 Identities=16% Similarity=0.122 Sum_probs=63.3
Q ss_pred hcCCCEEEEEccc--ccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCC--chHHHHHHhhccc
Q 029836 17 LINAKNTMEIGVF--TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGP--ALPLLDQLIQDEK 92 (187)
Q Consensus 17 ~~~~~~vLeiG~g--~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d--~~~~l~~~~~~~~ 92 (187)
..+.++||.+|+| .|..+..+++... +.+|++++.+++..+.+++ .|. + ..+-..+ ..+.+..+.
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~-Ga~Vi~~~~~~~~~~~~~~----~g~-~-~~~~~~~~~~~~~~~~~~---- 236 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVS-GATIIGVDVREEAVEAAKR----AGA-D-YVINASMQDPLAEIRRIT---- 236 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHT-CCEEEEEESSHHHHHHHHH----HTC-S-EEEETTTSCHHHHHHHHT----
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----hCC-C-EEecCCCccHHHHHHHHh----
Confidence 4466899999987 5556667776641 3689999999988777654 343 1 1221122 212233331
Q ss_pred CC-CceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 93 YH-GTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 93 ~~-~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
. +.+|++|-... ....++.+.+.|+++|.++.-.
T Consensus 237 -~~~~~d~vi~~~g---~~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 237 -ESKGVDAVIDLNN---SEKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp -TTSCEEEEEESCC---CHHHHTTGGGGEEEEEEEEECC
T ss_pred -cCCCceEEEECCC---CHHHHHHHHHHHhcCCEEEEEC
Confidence 2 57999986543 2446778889999999998743
No 358
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=96.25 E-value=0.033 Score=43.33 Aligned_cols=101 Identities=15% Similarity=0.075 Sum_probs=64.6
Q ss_pred hhcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCc-hHHHHHHhhcccC
Q 029836 16 KLINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA-LPLLDQLIQDEKY 93 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~-~~~l~~~~~~~~~ 93 (187)
.. +.++||-+|+|. |..+..+++...++.+|++++.+++..+.+++ .|. +. ++.-+. .+....+..
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa-~~--vi~~~~~~~~~~~~~~---- 235 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LGA-DY--VSEMKDAESLINKLTD---- 235 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTC-SE--EECHHHHHHHHHHHHT----
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCC-CE--EeccccchHHHHHhhc----
Confidence 44 778999999863 66777788775113689999999988877654 343 21 221111 223333321
Q ss_pred CCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 94 HGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 94 ~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
...+|+||--.. ....++.+.+.|+++|.++.-..
T Consensus 236 g~g~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 236 GLGASIAIDLVG---TEETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp TCCEEEEEESSC---CHHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCccEEEECCC---ChHHHHHHHHHhhcCCEEEEeCC
Confidence 237999985432 24467888899999999987443
No 359
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=96.24 E-value=0.043 Score=42.91 Aligned_cols=101 Identities=10% Similarity=0.067 Sum_probs=62.7
Q ss_pred HhhcCC------CEEEEEccc-ccHHH-HHHH-hhCCCCCEEEEEeCCch---HHHHHHHHHHHcCCCCceEEEeCCchH
Q 029836 15 LKLINA------KNTMEIGVF-TGYSL-LATA-LAIPDDGKILALDITKE---HYEKGLPIIQKAGVAHKIDFREGPALP 82 (187)
Q Consensus 15 ~~~~~~------~~vLeiG~g-~G~~~-~~l~-~~~~~~~~v~~vd~~~~---~~~~a~~~~~~~~~~~~i~~~~~d~~~ 82 (187)
+...+. ++||-+|+| .|..+ ..++ +..+ ..+|++++.+++ ..+.+++ .|. +.+.....+..+
T Consensus 162 ~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~G-a~~Vi~~~~~~~~~~~~~~~~~----lGa-~~v~~~~~~~~~ 235 (357)
T 2b5w_A 162 AYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKG-YENLYCLGRRDRPDPTIDIIEE----LDA-TYVDSRQTPVED 235 (357)
T ss_dssp HHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTC-CCEEEEEECCCSSCHHHHHHHH----TTC-EEEETTTSCGGG
T ss_pred cCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcC-CcEEEEEeCCcccHHHHHHHHH----cCC-cccCCCccCHHH
Confidence 345566 899999974 35566 7777 6653 234999999987 7766653 443 222111122223
Q ss_pred HHHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 83 LLDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 83 ~l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
+..+ .+.+|+||--.. ....++.+.+.|+++|.++.-..
T Consensus 236 -i~~~------~gg~Dvvid~~g---~~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 236 -VPDV------YEQMDFIYEATG---FPKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp -HHHH------SCCEEEEEECSC---CHHHHHHHHHHEEEEEEEEECCC
T ss_pred -HHHh------CCCCCEEEECCC---ChHHHHHHHHHHhcCCEEEEEeC
Confidence 3333 137999984332 23467888899999999987543
No 360
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=96.20 E-value=0.043 Score=42.75 Aligned_cols=95 Identities=21% Similarity=0.169 Sum_probs=61.5
Q ss_pred CCCEEEEEc-c-cccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCc
Q 029836 19 NAKNTMEIG-V-FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGT 96 (187)
Q Consensus 19 ~~~~vLeiG-~-g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~ 96 (187)
+.++||-+| + +.|..+..+++.. +.+|++++.+++..+.+++ .|. +.+--...+..+.+... . .+.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa-~~vi~~~~~~~~~~~~~---~--~~g 217 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY--GLRVITTASRNETIEWTKK----MGA-DIVLNHKESLLNQFKTQ---G--IEL 217 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEECCSHHHHHHHHH----HTC-SEEECTTSCHHHHHHHH---T--CCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCC-cEEEECCccHHHHHHHh---C--CCC
Confidence 578999994 3 3566777788775 4699999999988877765 343 21111112222223222 1 457
Q ss_pred eeEEEEcCCCcccHHHHHHHHhcccCCeEEEE
Q 029836 97 FDFVFVDADKDNYVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 97 ~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
+|+||-.. .....++.+.+.|+++|.++.
T Consensus 218 ~Dvv~d~~---g~~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 218 VDYVFCTF---NTDMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp EEEEEESS---CHHHHHHHHHHHEEEEEEEEE
T ss_pred ccEEEECC---CchHHHHHHHHHhccCCEEEE
Confidence 99988532 234567888899999999975
No 361
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=96.18 E-value=0.013 Score=46.39 Aligned_cols=102 Identities=11% Similarity=0.057 Sum_probs=63.6
Q ss_pred cCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCC---chHHHHHHhhcccC
Q 029836 18 INAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGP---ALPLLDQLIQDEKY 93 (187)
Q Consensus 18 ~~~~~vLeiG~g-~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d---~~~~l~~~~~~~~~ 93 (187)
.+.++||-+|+| .|..+..+++..+ ..+|++++.+++..+.+++ .|. + .++..+ ..++...+.... .
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~~----lGa-~--~vi~~~~~~~~~~~~~v~~~~-~ 264 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLG-AENVIVIAGSPNRLKLAEE----IGA-D--LTLNRRETSVEERRKAIMDIT-H 264 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTT-BSEEEEEESCHHHHHHHHH----TTC-S--EEEETTTSCHHHHHHHHHHHT-T
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcC-CceEEEEcCCHHHHHHHHH----cCC-c--EEEeccccCcchHHHHHHHHh-C
Confidence 456799999965 4667777888753 2599999999988776653 454 2 223322 223333222111 0
Q ss_pred CCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 94 HGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 94 ~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
...+|+||-.... ...++.+.+.|+++|.++.-..
T Consensus 265 g~g~Dvvid~~g~---~~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 265 GRGADFILEATGD---SRALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp TSCEEEEEECSSC---TTHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCcEEEECCCC---HHHHHHHHHHHhcCCEEEEEec
Confidence 2369999854321 2356778889999999987543
No 362
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=96.13 E-value=0.011 Score=46.12 Aligned_cols=100 Identities=10% Similarity=0.076 Sum_probs=63.4
Q ss_pred cCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 18 INAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 18 ~~~~~vLeiG~--g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
.+.++||-+|+ |.|..+..+++.. +.+|++++.+++..+.+++ .|. .. ++..+..++...+.... ...
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~----~ga-~~--~~d~~~~~~~~~~~~~~-~~~ 234 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLF--GARVIATAGSEDKLRRAKA----LGA-DE--TVNYTHPDWPKEVRRLT-GGK 234 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTC-SE--EEETTSTTHHHHHHHHT-TTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh----cCC-CE--EEcCCcccHHHHHHHHh-CCC
Confidence 35679999997 5777888888775 4699999999988877754 343 21 22221112222221110 024
Q ss_pred ceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 96 TFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 96 ~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.+|+||-... . ..++.+.+.|+++|.++.-..
T Consensus 235 ~~d~vi~~~g-~---~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 235 GADKVVDHTG-A---LYFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp CEEEEEESSC-S---SSHHHHHHHEEEEEEEEESSC
T ss_pred CceEEEECCC-H---HHHHHHHHhhccCCEEEEEec
Confidence 7999986554 2 246677889999999887443
No 363
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.09 E-value=0.035 Score=43.23 Aligned_cols=93 Identities=15% Similarity=0.205 Sum_probs=63.1
Q ss_pred hhcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCC
Q 029836 16 KLINAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYH 94 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~-G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~ 94 (187)
...+.++||-+|+|. |..+..+++.. +.+|++++.+++..+.+++ .|. +. ++ .+. +. + .
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa-~~--v~-~~~-~~---~------~ 232 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAM--GAEVSVFARNEHKKQDALS----MGV-KH--FY-TDP-KQ---C------K 232 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSSTTHHHHHH----TTC-SE--EE-SSG-GG---C------C
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHh----cCC-Ce--ec-CCH-HH---H------h
Confidence 345678999999864 77778888876 4699999999998877654 453 22 22 332 11 1 2
Q ss_pred CceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 95 GTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 95 ~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
..+|+||--.... ..++.+.+.|+++|.++.-..
T Consensus 233 ~~~D~vid~~g~~---~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 233 EELDFIISTIPTH---YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp SCEEEEEECCCSC---CCHHHHHTTEEEEEEEEECCC
T ss_pred cCCCEEEECCCcH---HHHHHHHHHHhcCCEEEEECC
Confidence 3799998543322 236677889999999987543
No 364
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=96.00 E-value=0.028 Score=44.04 Aligned_cols=99 Identities=16% Similarity=0.101 Sum_probs=62.4
Q ss_pred hhcCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCch-HHHHHHhhcccC
Q 029836 16 KLINAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPAL-PLLDQLIQDEKY 93 (187)
Q Consensus 16 ~~~~~~~vLeiG~g-~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~-~~l~~~~~~~~~ 93 (187)
...+.++||-+|+| .|..+..+++.. +.+|++++.+++..+.+++ .|. +. ++..+.. ++...+
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~--Ga~Vi~~~~~~~~~~~~~~----lGa-~~--v~~~~~~~~~~~~~------ 240 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAM--GAETYVISRSSRKREDAMK----MGA-DH--YIATLEEGDWGEKY------ 240 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHH----HTC-SE--EEEGGGTSCHHHHS------
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH----cCC-CE--EEcCcCchHHHHHh------
Confidence 34467899999974 366777788765 4689999999988877765 343 22 2222111 233333
Q ss_pred CCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 94 HGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 94 ~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.+.+|+||--.... ....++.+.+.|++||.++.-.
T Consensus 241 ~~~~D~vid~~g~~-~~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 241 FDTFDLIVVCASSL-TDIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp CSCEEEEEECCSCS-TTCCTTTGGGGEEEEEEEEECC
T ss_pred hcCCCEEEECCCCC-cHHHHHHHHHHhcCCCEEEEec
Confidence 35799998543320 0123456678999999998644
No 365
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=96.00 E-value=0.024 Score=44.36 Aligned_cols=100 Identities=16% Similarity=0.099 Sum_probs=62.2
Q ss_pred hcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCC
Q 029836 17 LINAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYH 94 (187)
Q Consensus 17 ~~~~~~vLeiG~--g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~ 94 (187)
..+.++||-+|+ |.|..+..+++.. +.+|++++.+++..+.++ +.|.. .++..+..++...+.... ..
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~----~~ga~---~~~d~~~~~~~~~~~~~~-~~ 237 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIVL----QNGAH---EVFNHREVNYIDKIKKYV-GE 237 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HTTCS---EEEETTSTTHHHHHHHHH-CT
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHHH----HcCCC---EEEeCCCchHHHHHHHHc-CC
Confidence 345689999996 5666777777765 479999999988776554 34431 122222222222221111 02
Q ss_pred CceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 95 GTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 95 ~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
..+|++|-... ...+..+.+.|+++|.++.-.
T Consensus 238 ~~~D~vi~~~G----~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 238 KGIDIIIEMLA----NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp TCEEEEEESCH----HHHHHHHHHHEEEEEEEEECC
T ss_pred CCcEEEEECCC----hHHHHHHHHhccCCCEEEEEe
Confidence 37999986442 235677889999999998744
No 366
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=96.00 E-value=0.025 Score=44.07 Aligned_cols=97 Identities=11% Similarity=0.032 Sum_probs=62.1
Q ss_pred CCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeC---CchHHHHHHhhcccCC
Q 029836 19 NAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREG---PALPLLDQLIQDEKYH 94 (187)
Q Consensus 19 ~~~~vLeiG~g-~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~---d~~~~l~~~~~~~~~~ 94 (187)
+.++||-+|+| .|..+..+++..+ ..+|++++.+++..+.+++ .|. +. ++.. +..+.+.++.. .
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~~~~~~~~~~~----~Ga-~~--~~~~~~~~~~~~v~~~~~----g 234 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASG-AYPVIVSEPSDFRRELAKK----VGA-DY--VINPFEEDVVKEVMDITD----G 234 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTT-CCSEEEECSCHHHHHHHHH----HTC-SE--EECTTTSCHHHHHHHHTT----T
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----hCC-CE--EECCCCcCHHHHHHHHcC----C
Confidence 66899999985 3667777787753 2389999999888776653 343 11 2222 22222222210 2
Q ss_pred CceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 95 GTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 95 ~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
..+|+||-... ....++.+.+.|+++|.++.-.
T Consensus 235 ~g~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 235 NGVDVFLEFSG---APKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp SCEEEEEECSC---CHHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCEEEECCC---CHHHHHHHHHHHhcCCEEEEEc
Confidence 36999985432 2456788889999999988744
No 367
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.98 E-value=0.032 Score=42.75 Aligned_cols=77 Identities=14% Similarity=0.106 Sum_probs=53.8
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCE-EEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGK-ILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~-v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
...+++|+-||.|..+.-+..+ +-... +.++|+++.+.+..+.|+ +...+..+|..++.+..... .+.+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~------~~~~~~~~DI~~i~~~~i~~---~~~~ 84 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRH------QGKIMYVGDVRSVTQKHIQE---WGPF 84 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHT------TTCEEEECCGGGCCHHHHHH---TCCC
T ss_pred CCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhC------CCCceeCCChHHccHHHhcc---cCCc
Confidence 3458999999999999888765 21222 699999999887777665 23467788887754432211 2468
Q ss_pred eEEEEcCC
Q 029836 98 DFVFVDAD 105 (187)
Q Consensus 98 D~v~~d~~ 105 (187)
|+++...+
T Consensus 85 Dll~ggpP 92 (295)
T 2qrv_A 85 DLVIGGSP 92 (295)
T ss_dssp SEEEECCC
T ss_pred CEEEecCC
Confidence 99998754
No 368
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=95.95 E-value=0.037 Score=43.10 Aligned_cols=96 Identities=17% Similarity=0.089 Sum_probs=61.7
Q ss_pred hcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCC
Q 029836 17 LINAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYH 94 (187)
Q Consensus 17 ~~~~~~vLeiG~--g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~ 94 (187)
..+.++||-+|+ +.|..+..+++.. +.+|+++ .+++.++.+++ .|... +. ...+..+.+..... .
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~--Ga~Vi~~-~~~~~~~~~~~----lGa~~-i~-~~~~~~~~~~~~~~----~ 214 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALAR--GARVFAT-ARGSDLEYVRD----LGATP-ID-ASREPEDYAAEHTA----G 214 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE-ECHHHHHHHHH----HTSEE-EE-TTSCHHHHHHHHHT----T
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEE-eCHHHHHHHHH----cCCCE-ec-cCCCHHHHHHHHhc----C
Confidence 345689999993 4677888888875 4699999 78877666543 45422 22 22223333333221 3
Q ss_pred CceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEe
Q 029836 95 GTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 95 ~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
..+|+||-... ...++.+.+.|+++|.++.-
T Consensus 215 ~g~D~vid~~g----~~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 215 QGFDLVYDTLG----GPVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp SCEEEEEESSC----THHHHHHHHHEEEEEEEEES
T ss_pred CCceEEEECCC----cHHHHHHHHHHhcCCeEEEE
Confidence 47998885433 24677888999999999864
No 369
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=95.84 E-value=0.083 Score=41.49 Aligned_cols=95 Identities=18% Similarity=0.156 Sum_probs=59.2
Q ss_pred CCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 19 NAKNTMEIGVFT-GYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 19 ~~~~vLeiG~g~-G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
+.++||-+|+|. |..+..+++.. +.+|++++.+++..+.+++ +.|. + .++..+..+.+... .+.+
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~---~lGa-~--~v~~~~~~~~~~~~------~~~~ 252 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAF--GSKVTVISTSPSKKEEALK---NFGA-D--SFLVSRDQEQMQAA------AGTL 252 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGGGHHHHHH---TSCC-S--EEEETTCHHHHHHT------TTCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---hcCC-c--eEEeccCHHHHHHh------hCCC
Confidence 668999999752 55666677765 4699999999887766542 3343 2 22222222333333 3579
Q ss_pred eEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 98 DFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 98 D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
|+||-...... .++.+.+.|+++|.++.-.
T Consensus 253 D~vid~~g~~~---~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 253 DGIIDTVSAVH---PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp EEEEECCSSCC---CSHHHHHHEEEEEEEEECC
T ss_pred CEEEECCCcHH---HHHHHHHHHhcCCEEEEEc
Confidence 99985443221 2345667889999988643
No 370
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.82 E-value=0.081 Score=41.12 Aligned_cols=77 Identities=9% Similarity=-0.070 Sum_probs=53.3
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEE-EEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKI-LALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v-~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
++.+++|+.||.|..+.-+..+--+...+ .++|+++.+++..+.|+... ++++|..++.+.... ...+
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-------~~~~DI~~~~~~~i~----~~~~ 77 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-------VQVKNLDSISIKQIE----SLNC 77 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-------CBCCCTTTCCHHHHH----HTCC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-------cccCChhhcCHHHhc----cCCC
Confidence 34589999999999999887652111356 79999999999888887431 456777654332211 1268
Q ss_pred eEEEEcCCC
Q 029836 98 DFVFVDADK 106 (187)
Q Consensus 98 D~v~~d~~~ 106 (187)
|+++...+.
T Consensus 78 Dil~ggpPC 86 (327)
T 3qv2_A 78 NTWFMSPPC 86 (327)
T ss_dssp CEEEECCCC
T ss_pred CEEEecCCc
Confidence 999987663
No 371
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=95.77 E-value=0.16 Score=39.95 Aligned_cols=98 Identities=10% Similarity=0.059 Sum_probs=61.6
Q ss_pred cCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 18 INAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 18 ~~~~~vLeiG~--g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
.++++||-+|+ +.|..+..+++.. +.+|+++. +++..+.++ +.|...-+.....+..+.+..+. .+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~--Ga~Vi~~~-~~~~~~~~~----~lGa~~vi~~~~~~~~~~v~~~t-----~g 230 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS--GYIPIATC-SPHNFDLAK----SRGAEEVFDYRAPNLAQTIRTYT-----KN 230 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHHH----HTTCSEEEETTSTTHHHHHHHHT-----TT
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe-CHHHHHHHH----HcCCcEEEECCCchHHHHHHHHc-----cC
Confidence 45679999998 3788888899876 46888885 777766554 45542111111223223333331 34
Q ss_pred ceeEEEEcCCCcccHHHHHHHHhcc-cCCeEEEEeC
Q 029836 96 TFDFVFVDADKDNYVNYHKRLIELV-KVGGVIGYDN 130 (187)
Q Consensus 96 ~~D~v~~d~~~~~~~~~~~~~~~~L-~~gG~lv~~~ 130 (187)
.+|+||-... ....++.+.+.| ++||.++.-.
T Consensus 231 ~~d~v~d~~g---~~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 231 NLRYALDCIT---NVESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp CCCEEEESSC---SHHHHHHHHHHSCTTCEEEEESS
T ss_pred CccEEEECCC---chHHHHHHHHHhhcCCCEEEEEe
Confidence 6999884322 245677788888 6999998754
No 372
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=95.68 E-value=0.052 Score=42.44 Aligned_cols=100 Identities=5% Similarity=-0.055 Sum_probs=61.5
Q ss_pred cCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 18 INAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 18 ~~~~~vLeiG~--g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
.+.++||-+|+ |.|..+..+++.. +.+|++++.+++.++.+++ .|. .. ++..+..++...+.... ...
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~g~--~~-~~~~~~~~~~~~~~~~~-~~~ 230 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMA--GAIPLVTAGSQKKLQMAEK----LGA--AA-GFNYKKEDFSEATLKFT-KGA 230 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----HTC--SE-EEETTTSCHHHHHHHHT-TTS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCC--cE-EEecCChHHHHHHHHHh-cCC
Confidence 45679999983 5666777777764 4799999999988777643 343 11 22222112222221110 024
Q ss_pred ceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 96 TFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 96 ~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
.+|++|-..... .+..+.+.|+++|.++.-..
T Consensus 231 ~~d~vi~~~G~~----~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 231 GVNLILDCIGGS----YWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp CEEEEEESSCGG----GHHHHHHHEEEEEEEEECCC
T ss_pred CceEEEECCCch----HHHHHHHhccCCCEEEEEec
Confidence 699998654322 46677889999999987543
No 373
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=95.62 E-value=0.06 Score=40.99 Aligned_cols=93 Identities=16% Similarity=0.152 Sum_probs=62.3
Q ss_pred hcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCc-hHHHHHHhhcccC
Q 029836 17 LINAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA-LPLLDQLIQDEKY 93 (187)
Q Consensus 17 ~~~~~~vLeiG~--g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~-~~~l~~~~~~~~~ 93 (187)
..+.++||-+|+ +.|..+..+++.. +.+|++++.+++..+.+++ .|. + .++..+. .++...+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga-~--~~~~~~~~~~~~~~~------ 187 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPEKLALPLA----LGA-E--EAATYAEVPERAKAW------ 187 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGGGSHHHHH----TTC-S--EEEEGGGHHHHHHHT------
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh----cCC-C--EEEECCcchhHHHHh------
Confidence 345689999997 5677788888875 4699999999988877654 343 2 1222221 2232222
Q ss_pred CCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 94 HGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 94 ~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
+.+|+||- ... ..++.+.+.|+++|.++.-.
T Consensus 188 -~~~d~vid-~g~----~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 188 -GGLDLVLE-VRG----KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp -TSEEEEEE-CSC----TTHHHHHTTEEEEEEEEEC-
T ss_pred -cCceEEEE-CCH----HHHHHHHHhhccCCEEEEEe
Confidence 46999987 543 35678889999999988643
No 374
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.60 E-value=0.031 Score=43.63 Aligned_cols=76 Identities=14% Similarity=0.038 Sum_probs=53.3
Q ss_pred CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeE
Q 029836 20 AKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDF 99 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~ 99 (187)
+.+++|+.||.|..+.-+..+--....+.++|+++.+.+..+.|+. ...++.+|..++.+.... ...+|+
T Consensus 3 ~~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~------~~~~~~~DI~~~~~~~~~----~~~~D~ 72 (333)
T 4h0n_A 3 SHKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP------ETNLLNRNIQQLTPQVIK----KWNVDT 72 (333)
T ss_dssp CEEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT------TSCEECCCGGGCCHHHHH----HTTCCE
T ss_pred CCEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC------CCceeccccccCCHHHhc----cCCCCE
Confidence 3479999999999999887652111357899999999888777763 334667887765433211 126899
Q ss_pred EEEcCC
Q 029836 100 VFVDAD 105 (187)
Q Consensus 100 v~~d~~ 105 (187)
++...+
T Consensus 73 l~ggpP 78 (333)
T 4h0n_A 73 ILMSPP 78 (333)
T ss_dssp EEECCC
T ss_pred EEecCC
Confidence 998765
No 375
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.54 E-value=0.073 Score=35.55 Aligned_cols=92 Identities=15% Similarity=0.067 Sum_probs=54.3
Q ss_pred CCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchH--HHHHHhhcccCCCc
Q 029836 20 AKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDEKYHGT 96 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~--~l~~~~~~~~~~~~ 96 (187)
.++++-+|+ |.++..+++.+. .+.+|+++|.+++.++.+++ ..+.++.+|..+ .+.... -..
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~--------~~~~~~~gd~~~~~~l~~~~-----~~~ 70 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED--------EGFDAVIADPTDESFYRSLD-----LEG 70 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TTCEEEECCTTCHHHHHHSC-----CTT
T ss_pred CCEEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH--------CCCcEEECCCCCHHHHHhCC-----ccc
Confidence 457999988 556666655442 24689999999987765543 235677787754 333321 346
Q ss_pred eeEEEEcCCCcccHHHHHHHHhcccCCeEEE
Q 029836 97 FDFVFVDADKDNYVNYHKRLIELVKVGGVIG 127 (187)
Q Consensus 97 ~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv 127 (187)
.|+|++-.+........-...+.+. ...++
T Consensus 71 ~d~vi~~~~~~~~n~~~~~~a~~~~-~~~ii 100 (141)
T 3llv_A 71 VSAVLITGSDDEFNLKILKALRSVS-DVYAI 100 (141)
T ss_dssp CSEEEECCSCHHHHHHHHHHHHHHC-CCCEE
T ss_pred CCEEEEecCCHHHHHHHHHHHHHhC-CceEE
Confidence 8999876542222222333334445 44444
No 376
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=95.50 E-value=0.013 Score=45.57 Aligned_cols=94 Identities=12% Similarity=0.058 Sum_probs=61.0
Q ss_pred CCCEEEEEccc-ccHHHHHHHhhCCCCC-EEEEEeCCchHHHHHHHHHHHcCCCCceEEEeC---CchHHHHHHhhcccC
Q 029836 19 NAKNTMEIGVF-TGYSLLATALAIPDDG-KILALDITKEHYEKGLPIIQKAGVAHKIDFREG---PALPLLDQLIQDEKY 93 (187)
Q Consensus 19 ~~~~vLeiG~g-~G~~~~~l~~~~~~~~-~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~---d~~~~l~~~~~~~~~ 93 (187)
+.++||-+|+| .|..+..+++.. +. +|++++.+++..+.+++. . +. ++.. +..+.+..+.
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~l--a----~~--v~~~~~~~~~~~~~~~~----- 228 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRAS--GAGPILVSDPNPYRLAFARPY--A----DR--LVNPLEEDLLEVVRRVT----- 228 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHGGGTTT--C----SE--EECTTTSCHHHHHHHHH-----
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh--H----Hh--ccCcCccCHHHHHHHhc-----
Confidence 67899999974 366777788775 35 899999998877766542 1 11 2221 2222233221
Q ss_pred CCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 94 HGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 94 ~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
...+|+||--.. ....++.+.+.|+++|.++.-.
T Consensus 229 ~~g~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 229 GSGVEVLLEFSG---NEAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp SSCEEEEEECSC---CHHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCEEEECCC---CHHHHHHHHHHHhcCCEEEEEe
Confidence 246999985432 2456788889999999988644
No 377
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=95.33 E-value=0.075 Score=41.57 Aligned_cols=95 Identities=15% Similarity=0.209 Sum_probs=59.3
Q ss_pred CCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 19 NAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 19 ~~~~vLeiG~g-~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
+.++||-+|+| .|..+..+++.. +.+|++++.+++..+.+++ +.|. +. ++..+..+.+... .+.+
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~~~~~~~~~~~~---~lGa-~~--vi~~~~~~~~~~~------~~g~ 245 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAM--GHHVTVISSSNKKREEALQ---DLGA-DD--YVIGSDQAKMSEL------ADSL 245 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSTTHHHHHHT---TSCC-SC--EEETTCHHHHHHS------TTTE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHH---HcCC-ce--eeccccHHHHHHh------cCCC
Confidence 67899999975 355666777765 4689999999887765542 3453 22 2222222333333 3479
Q ss_pred eEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 98 DFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 98 D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
|+||--..... .++.+.+.|+++|.++.-.
T Consensus 246 D~vid~~g~~~---~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 246 DYVIDTVPVHH---ALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp EEEEECCCSCC---CSHHHHTTEEEEEEEEECS
T ss_pred CEEEECCCChH---HHHHHHHHhccCCEEEEeC
Confidence 99985433221 2445678999999998644
No 378
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.26 E-value=0.28 Score=32.19 Aligned_cols=94 Identities=15% Similarity=0.126 Sum_probs=54.3
Q ss_pred CCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchH--HHHHHhhcccCCCc
Q 029836 20 AKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDEKYHGT 96 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~--~l~~~~~~~~~~~~ 96 (187)
.++|+-+|+ |..+..++..+. .+.+|+.+|.+++..+.+++ .. .+.++.+|..+ .+.... -..
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~---~~----~~~~~~~d~~~~~~l~~~~-----~~~ 69 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA---EI----DALVINGDCTKIKTLEDAG-----IED 69 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HC----SSEEEESCTTSHHHHHHTT-----TTT
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH---hc----CcEEEEcCCCCHHHHHHcC-----ccc
Confidence 357888886 666666655442 24689999999876654432 11 34556666533 222210 246
Q ss_pred eeEEEEcCCCcccHHHHHHHHhcccCCeEEE
Q 029836 97 FDFVFVDADKDNYVNYHKRLIELVKVGGVIG 127 (187)
Q Consensus 97 ~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv 127 (187)
.|+|++-.........+....+.++++-+++
T Consensus 70 ~d~vi~~~~~~~~~~~~~~~~~~~~~~~ii~ 100 (140)
T 1lss_A 70 ADMYIAVTGKEEVNLMSSLLAKSYGINKTIA 100 (140)
T ss_dssp CSEEEECCSCHHHHHHHHHHHHHTTCCCEEE
T ss_pred CCEEEEeeCCchHHHHHHHHHHHcCCCEEEE
Confidence 8999987543333334444555677765544
No 379
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=95.09 E-value=0.045 Score=44.14 Aligned_cols=48 Identities=17% Similarity=0.181 Sum_probs=39.2
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC----CCCEEEEEeCCchHHHHHHHHHHH
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIP----DDGKILALDITKEHYEKGLPIIQK 66 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~----~~~~v~~vd~~~~~~~~a~~~~~~ 66 (187)
.+-+|+|+|+|.|..+..++..+. ...+++.||+|+...+.-++.+..
T Consensus 137 g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 137 GTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 467999999999999888876542 124899999999999888888875
No 380
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.06 E-value=0.053 Score=42.01 Aligned_cols=58 Identities=17% Similarity=0.239 Sum_probs=43.4
Q ss_pred HHHHHHHHhh--cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCc---hHHHHHHHHHHHcC
Q 029836 8 AQFFSMLLKL--INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITK---EHYEKGLPIIQKAG 68 (187)
Q Consensus 8 ~~~l~~l~~~--~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~---~~~~~a~~~~~~~~ 68 (187)
.++++.++.. .+...|||--||+|..+...... +-+.+++|+++ ..++.++++++..+
T Consensus 229 ~~l~~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~---~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 229 AAVIERLVRALSHPGSTVLDFFAGSGVTARVAIQE---GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp HHHHHHHHHHHSCTTCEEEETTCTTCHHHHHHHHH---TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHhCCCCCEEEecCCCCCHHHHHHHHc---CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 3455555543 35679999999999988877665 46899999999 99999999988765
No 381
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.03 E-value=0.038 Score=42.82 Aligned_cols=58 Identities=7% Similarity=0.043 Sum_probs=45.2
Q ss_pred HHHHHHHhh--cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCC
Q 029836 9 QFFSMLLKL--INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGV 69 (187)
Q Consensus 9 ~~l~~l~~~--~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~ 69 (187)
+++..++.. .+...|||--||+|..+...... +.+.+++|+++...+.++++++..+.
T Consensus 240 ~l~~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~~---gr~~ig~e~~~~~~~~~~~r~~~~~~ 299 (323)
T 1boo_A 240 KLPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERE---SRKWISFEMKPEYVAASAFRFLDNNI 299 (323)
T ss_dssp HHHHHHHHHHCCTTCEEEETTCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHGGGSCSCS
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc---CCCEEEEeCCHHHHHHHHHHHHhccc
Confidence 455555543 35679999999999988776654 46899999999999999998876553
No 382
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=95.02 E-value=0.063 Score=44.02 Aligned_cols=77 Identities=5% Similarity=-0.154 Sum_probs=53.1
Q ss_pred CEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHH-------------H
Q 029836 21 KNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQ-------------L 87 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~-------------~ 87 (187)
.+++|+-||.|..+.-+..+ + -..+.++|+++.+++..+.|+.. .+...++.+|..++... +
T Consensus 89 ~~viDLFaG~GGlslG~~~a-G-~~~v~avE~d~~A~~ty~~N~~~---~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i 163 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESI-G-GQCVFTSEWNKHAVRTYKANHYC---DPATHHFNEDIRDITLSHQEGVSDEAAAEHI 163 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTT-T-EEEEEEECCCHHHHHHHHHHSCC---CTTTCEEESCTHHHHCTTCTTSCHHHHHHHH
T ss_pred ceEEEecCCccHHHHHHHHC-C-CEEEEEEeCCHHHHHHHHHhccc---CCCcceeccchhhhhhccccccchhhHHhhh
Confidence 48999999999999888764 1 23589999999888777766521 23445677888765411 1
Q ss_pred hhcccCCCceeEEEEcCC
Q 029836 88 IQDEKYHGTFDFVFVDAD 105 (187)
Q Consensus 88 ~~~~~~~~~~D~v~~d~~ 105 (187)
... ...+|+++...+
T Consensus 164 ~~~---~~~~Dvl~gGpP 178 (482)
T 3me5_A 164 RQH---IPEHDVLLAGFP 178 (482)
T ss_dssp HHH---SCCCSEEEEECC
T ss_pred hhc---CCCCCEEEecCC
Confidence 111 356899988765
No 383
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=94.98 E-value=0.088 Score=42.65 Aligned_cols=103 Identities=16% Similarity=0.064 Sum_probs=63.2
Q ss_pred hcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCc--------------
Q 029836 17 LINAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA-------------- 80 (187)
Q Consensus 17 ~~~~~~vLeiG~--g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~-------------- 80 (187)
..+.++||-+|+ +.|..+..+++.. +.++++++.+++.++.+++ .|...-+.....+.
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~--Ga~vi~~~~~~~~~~~~~~----lGa~~vi~~~~~d~~~~~~~~~~~~~~~ 299 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAG--GANPICVVSSPQKAEICRA----MGAEAIIDRNAEGYRFWKDENTQDPKEW 299 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCCEEEETTTTTCCSEEETTEECHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc--CCeEEEEECCHHHHHHHHh----hCCcEEEecCcCcccccccccccchHHH
Confidence 345679999996 4677888888875 5789999988888777654 44421111111111
Q ss_pred hHHHHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 81 LPLLDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 81 ~~~l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.++...+.+.. ....+|+||-... ...++.+.+.|++||.++.-.
T Consensus 300 ~~~~~~i~~~t-~g~g~Dvvid~~G----~~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 300 KRFGKRIRELT-GGEDIDIVFEHPG----RETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHHHH-TSCCEEEEEECSC----HHHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHHHHh-CCCCCcEEEEcCC----chhHHHHHHHhhCCcEEEEEe
Confidence 01112221110 0247998885332 256788889999999998744
No 384
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=94.95 E-value=0.043 Score=43.50 Aligned_cols=95 Identities=13% Similarity=0.010 Sum_probs=68.1
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCC-ceEEEeCCchHHHHHHhhcccCCCce
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAH-KIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~-~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
...+||.++-+.|..+++++.. .++.+.-+--.....+.|++.+++.+ ++++...-. .. ...|
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~-----~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~------~~~~ 101 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH-----KPYSIGDSYISELATRENLRLNGIDESSVKFLDSTA-----DY------PQQP 101 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG-----CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEETTS-----CC------CSSC
T ss_pred CCCCEEEECCCCCHHHHhhccC-----CceEEEhHHHHHHHHHHHHHHcCCCccceEeccccc-----cc------ccCC
Confidence 4468999999999999988743 23555545556677889999998864 366643211 11 4679
Q ss_pred eEEEEcCCC--cccHHHHHHHHhcccCCeEEEEe
Q 029836 98 DFVFVDADK--DNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 98 D~v~~d~~~--~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
|+|++..++ ......+..+...|++|+.+++.
T Consensus 102 ~~v~~~lpk~~~~l~~~L~~l~~~l~~~~~i~~~ 135 (375)
T 4dcm_A 102 GVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAG 135 (375)
T ss_dssp SEEEEECCSCHHHHHHHHHHHHTTCCTTSEEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 999988763 34566778888999999988764
No 385
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=94.95 E-value=0.13 Score=41.47 Aligned_cols=103 Identities=13% Similarity=0.028 Sum_probs=63.1
Q ss_pred hcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCc--------------
Q 029836 17 LINAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA-------------- 80 (187)
Q Consensus 17 ~~~~~~vLeiG~--g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~-------------- 80 (187)
..+.++||-+|+ |.|..+..+++.. +.++++++.+++.++.++ +.|...-+.....+.
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~--Ga~vi~~~~~~~~~~~~~----~lGa~~~i~~~~~~~~~~~~~~~~~~~~~ 291 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNG--GGIPVAVVSSAQKEAAVR----ALGCDLVINRAELGITDDIADDPRRVVET 291 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HTTCCCEEEHHHHTCCTTGGGCHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHH----hcCCCEEEecccccccccccccccccchh
Confidence 345689999996 4677777888875 578999999888777664 345422121111111
Q ss_pred -hHHHHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 81 -LPLLDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 81 -~~~l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
..+...+.... ...+|+||-... ...++.+.+.|++||.++.-..
T Consensus 292 ~~~~~~~v~~~~--g~g~Dvvid~~G----~~~~~~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 292 GRKLAKLVVEKA--GREPDIVFEHTG----RVTFGLSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHHHHHHHHHH--SSCCSEEEECSC----HHHHHHHHHHSCTTCEEEESCC
T ss_pred hhHHHHHHHHHh--CCCceEEEECCC----chHHHHHHHHHhcCCEEEEEec
Confidence 00111111110 347999985433 2467788899999999987543
No 386
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=94.94 E-value=0.054 Score=41.73 Aligned_cols=93 Identities=8% Similarity=0.018 Sum_probs=57.8
Q ss_pred EEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCc-hHHHHHHhhcccCCCcee
Q 029836 22 NTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA-LPLLDQLIQDEKYHGTFD 98 (187)
Q Consensus 22 ~vLeiG~--g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~-~~~l~~~~~~~~~~~~~D 98 (187)
+||-+|+ +.|..+..+++.. +.+|++++.+++..+.+++ .|. +.+ +-..+. .+....+. .+.+|
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~----lGa-~~~-i~~~~~~~~~~~~~~-----~~~~d 218 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAEHDYLRV----LGA-KEV-LAREDVMAERIRPLD-----KQRWA 218 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTCHHHHHH----TTC-SEE-EECC---------CC-----SCCEE
T ss_pred eEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHH----cCC-cEE-EecCCcHHHHHHHhc-----CCccc
Confidence 8999996 5677888888876 4689999999888777654 453 211 111111 11122221 34799
Q ss_pred EEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 99 FVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 99 ~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
+||-.... ..++.+.+.++++|.++.-..
T Consensus 219 ~vid~~g~----~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 219 AAVDPVGG----RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp EEEECSTT----TTHHHHHHTEEEEEEEEECSC
T ss_pred EEEECCcH----HHHHHHHHhhccCCEEEEEee
Confidence 98754332 246778889999999987543
No 387
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.70 E-value=0.17 Score=40.61 Aligned_cols=94 Identities=15% Similarity=0.012 Sum_probs=60.1
Q ss_pred CCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchH--HHHHHhhcccCCCc
Q 029836 20 AKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDEKYHGT 96 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~--~l~~~~~~~~~~~~ 96 (187)
..+|+-+|+ |..+..+++.+. .+..|+.+|.+++.++.+++ . .+.++.||+.+ .+.... -..
T Consensus 4 ~~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~----g~~vi~GDat~~~~L~~ag-----i~~ 68 (413)
T 3l9w_A 4 GMRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----F----GMKVFYGDATRMDLLESAG-----AAK 68 (413)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----T----TCCCEESCTTCHHHHHHTT-----TTT
T ss_pred CCeEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----C----CCeEEEcCCCCHHHHHhcC-----CCc
Confidence 457888887 555555554442 24789999999998877653 2 35577888765 444431 357
Q ss_pred eeEEEEcCCCcccHHHHHHHHhcccCCeEEEE
Q 029836 97 FDFVFVDADKDNYVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 97 ~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
.|+|++-.+.......+-...+.+.|...+++
T Consensus 69 A~~viv~~~~~~~n~~i~~~ar~~~p~~~Iia 100 (413)
T 3l9w_A 69 AEVLINAIDDPQTNLQLTEMVKEHFPHLQIIA 100 (413)
T ss_dssp CSEEEECCSSHHHHHHHHHHHHHHCTTCEEEE
T ss_pred cCEEEECCCChHHHHHHHHHHHHhCCCCeEEE
Confidence 89998866543333444445566777766654
No 388
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.68 E-value=0.2 Score=34.94 Aligned_cols=95 Identities=13% Similarity=0.154 Sum_probs=53.8
Q ss_pred CCEEEEEcccccHHHHHHHhhCC-C-CCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchH--HHHHHhhcccCCC
Q 029836 20 AKNTMEIGVFTGYSLLATALAIP-D-DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDEKYHG 95 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~~~~~-~-~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~--~l~~~~~~~~~~~ 95 (187)
.++|+-+|+ |..+..+++.+. . +.+|+++|.+++..+.+++ .+ +.++.+|..+ .+... .+ -.
T Consensus 39 ~~~v~IiG~--G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~g----~~~~~gd~~~~~~l~~~--~~--~~ 104 (183)
T 3c85_A 39 HAQVLILGM--GRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----EG----RNVISGDATDPDFWERI--LD--TG 104 (183)
T ss_dssp TCSEEEECC--SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----TT----CCEEECCTTCHHHHHTB--CS--CC
T ss_pred CCcEEEECC--CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----CC----CCEEEcCCCCHHHHHhc--cC--CC
Confidence 358999886 566666555442 2 4679999999987765442 22 4456666543 33321 00 24
Q ss_pred ceeEEEEcCCCcccHHHHHHHHhcccCCeEEEE
Q 029836 96 TFDFVFVDADKDNYVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 96 ~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
.+|+|++-..........-...+.+.++..+++
T Consensus 105 ~ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~ 137 (183)
T 3c85_A 105 HVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAA 137 (183)
T ss_dssp CCCEEEECCSSHHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHHCCCCEEEE
Confidence 689999854422222222233455566667765
No 389
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=94.64 E-value=0.25 Score=38.06 Aligned_cols=70 Identities=13% Similarity=-0.071 Sum_probs=51.0
Q ss_pred CEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEE
Q 029836 21 KNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFV 100 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v 100 (187)
.+|||+-||.|..+.-+..+ + -.-+.++|+++.+.+..+.|+. .+++.+|..++-+.- -...|++
T Consensus 1 mkvidLFsG~GG~~~G~~~a-G-~~~v~a~e~d~~a~~ty~~N~~-------~~~~~~DI~~i~~~~------~~~~D~l 65 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA-G-FRIICANEYDKSIWKTYESNHS-------AKLIKGDISKISSDE------FPKCDGI 65 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT-T-CEEEEEEECCTTTHHHHHHHCC-------SEEEESCGGGCCGGG------SCCCSEE
T ss_pred CeEEEeCcCccHHHHHHHHC-C-CEEEEEEeCCHHHHHHHHHHCC-------CCcccCChhhCCHhh------CCcccEE
Confidence 37999999999998887765 2 2457899999999887777652 256788887653322 3568998
Q ss_pred EEcCC
Q 029836 101 FVDAD 105 (187)
Q Consensus 101 ~~d~~ 105 (187)
+...+
T Consensus 66 ~ggpP 70 (331)
T 3ubt_Y 66 IGGPP 70 (331)
T ss_dssp ECCCC
T ss_pred EecCC
Confidence 87654
No 390
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=94.63 E-value=0.28 Score=36.45 Aligned_cols=79 Identities=15% Similarity=0.079 Sum_probs=47.6
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC--CCCEEEEEeCCc-------------------hHHHHHHHHHHHcCCCCceEEEe
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIP--DDGKILALDITK-------------------EHYEKGLPIIQKAGVAHKIDFRE 77 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~--~~~~v~~vd~~~-------------------~~~~~a~~~~~~~~~~~~i~~~~ 77 (187)
+..+|+-+|+| ..+..+++.+. .-++++.+|.+. ...+.+.+.+...+-.-+++.+.
T Consensus 30 ~~~~VlVvG~G--g~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 107 (249)
T 1jw9_B 30 KDSRVLIVGLG--GLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN 107 (249)
T ss_dssp HHCEEEEECCS--HHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred hCCeEEEEeeC--HHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence 45799999986 33333333221 136999999987 66777777777654323455655
Q ss_pred CCchH-HHHHHhhcccCCCceeEEEEcCC
Q 029836 78 GPALP-LLDQLIQDEKYHGTFDFVFVDAD 105 (187)
Q Consensus 78 ~d~~~-~l~~~~~~~~~~~~~D~v~~d~~ 105 (187)
.+..+ .+..+ -..+|+|+...+
T Consensus 108 ~~~~~~~~~~~------~~~~DvVi~~~d 130 (249)
T 1jw9_B 108 ALLDDAELAAL------IAEHDLVLDCTD 130 (249)
T ss_dssp SCCCHHHHHHH------HHTSSEEEECCS
T ss_pred ccCCHhHHHHH------HhCCCEEEEeCC
Confidence 54432 22333 236899986554
No 391
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=94.59 E-value=0.07 Score=41.58 Aligned_cols=97 Identities=13% Similarity=0.095 Sum_probs=54.7
Q ss_pred hcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCC
Q 029836 17 LINAKNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYH 94 (187)
Q Consensus 17 ~~~~~~vLeiG~--g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~ 94 (187)
..+.++||-+|+ +.|..+..+++... ..+|++++ +++..+.++ .|...-+. ...+..+.+..+. .
T Consensus 140 ~~~g~~VlV~Ga~G~vG~~a~qla~~~g-~~~V~~~~-~~~~~~~~~-----~ga~~~~~-~~~~~~~~~~~~~-----~ 206 (349)
T 4a27_A 140 LREGMSVLVHSAGGGVGQAVAQLCSTVP-NVTVFGTA-STFKHEAIK-----DSVTHLFD-RNADYVQEVKRIS-----A 206 (349)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHTTST-TCEEEEEE-CGGGHHHHG-----GGSSEEEE-TTSCHHHHHHHHC-----T
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcC-CcEEEEeC-CHHHHHHHH-----cCCcEEEc-CCccHHHHHHHhc-----C
Confidence 345689999997 45667777887654 57899888 454444332 34321112 2222223333331 4
Q ss_pred CceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 95 GTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 95 ~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
+.+|+||-.... ..++.+.+.|+++|.++.-.
T Consensus 207 ~g~Dvv~d~~g~----~~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 207 EGVDIVLDCLCG----DNTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp TCEEEEEEECC-----------CTTEEEEEEEEEEC
T ss_pred CCceEEEECCCc----hhHHHHHHHhhcCCEEEEEC
Confidence 579999854321 12367889999999998654
No 392
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=94.55 E-value=0.16 Score=39.73 Aligned_cols=106 Identities=8% Similarity=0.041 Sum_probs=58.4
Q ss_pred cCC-CEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEe---CCchHHHHHHhhcc
Q 029836 18 INA-KNTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFRE---GPALPLLDQLIQDE 91 (187)
Q Consensus 18 ~~~-~~vLeiG~--g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~---~d~~~~l~~~~~~~ 91 (187)
.+. ++||-+|+ +.|..+..+++.. +.+++++..+++..+..++.+++.|...-+.... .+..+.+.++...+
T Consensus 165 ~~g~~~VlV~Ga~G~vG~~aiqlak~~--Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~ 242 (364)
T 1gu7_A 165 TPGKDWFIQNGGTSAVGKYASQIGKLL--NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQS 242 (364)
T ss_dssp CTTTCEEEESCTTSHHHHHHHHHHHHH--TCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHH
T ss_pred CCCCcEEEECCCCcHHHHHHHHHHHHC--CCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhcc
Confidence 355 89999985 5677788888875 4688888765554222223344556421111111 12222222221000
Q ss_pred cCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 92 KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 92 ~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
...+|+||-... ..... .+.+.|+++|.++.-..
T Consensus 243 --~~g~Dvvid~~G---~~~~~-~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 243 --GGEAKLALNCVG---GKSST-GIARKLNNNGLMLTYGG 276 (364)
T ss_dssp --TCCEEEEEESSC---HHHHH-HHHHTSCTTCEEEECCC
T ss_pred --CCCceEEEECCC---chhHH-HHHHHhccCCEEEEecC
Confidence 347999985332 12233 66789999999987443
No 393
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.50 E-value=0.23 Score=39.03 Aligned_cols=100 Identities=12% Similarity=0.117 Sum_probs=58.4
Q ss_pred cCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCc
Q 029836 18 INAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGT 96 (187)
Q Consensus 18 ~~~~~vLeiG~g-~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~ 96 (187)
.++++|+-+|+| .|.....++..++ .+|+.+|.+++..+.+++.... .+.....+..++...+ ..
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~G--a~V~v~dr~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~-------~~ 230 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGLG--AQVQIFDINVERLSYLETLFGS-----RVELLYSNSAEIETAV-------AE 230 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHGG-----GSEEEECCHHHHHHHH-------HT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHhhCc-----eeEeeeCCHHHHHHHH-------cC
Confidence 356899999984 3334445555553 5999999999888777665432 2333333332332222 35
Q ss_pred eeEEEEcCCCcc--cHH-HHHHHHhcccCCeEEEEeCc
Q 029836 97 FDFVFVDADKDN--YVN-YHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 97 ~D~v~~d~~~~~--~~~-~~~~~~~~L~~gG~lv~~~~ 131 (187)
+|+|+.-..... .+. ..+...+.+++||+++--.+
T Consensus 231 ~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 231 ADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp CSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred CCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence 899975433111 111 13456678999998875433
No 394
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=94.49 E-value=0.17 Score=39.57 Aligned_cols=94 Identities=14% Similarity=0.116 Sum_probs=58.1
Q ss_pred CCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCc---hHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 20 AKNTMEIGVF-TGYSLLATALAIPDDGKILALDITK---EHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 20 ~~~vLeiG~g-~G~~~~~l~~~~~~~~~v~~vd~~~---~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
.++||-+|+| .|..+..+++.. +.+|++++.++ +..+.+++ .|. +.+ ..+ ++...+.. . .+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~~~----~ga-~~v---~~~--~~~~~~~~-~--~~ 245 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY--GLEVWMANRREPTEVEQTVIEE----TKT-NYY---NSS--NGYDKLKD-S--VG 245 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH--TCEEEEEESSCCCHHHHHHHHH----HTC-EEE---ECT--TCSHHHHH-H--HC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCccchHHHHHHHH----hCC-cee---chH--HHHHHHHH-h--CC
Confidence 7899999973 244555666654 46999999988 76665543 343 222 211 22222221 1 24
Q ss_pred ceeEEEEcCCCcccHHHH-HHHHhcccCCeEEEEeCc
Q 029836 96 TFDFVFVDADKDNYVNYH-KRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 96 ~~D~v~~d~~~~~~~~~~-~~~~~~L~~gG~lv~~~~ 131 (187)
.+|+||-..... ..+ +.+.+.|+++|.++.-..
T Consensus 246 ~~d~vid~~g~~---~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 246 KFDVIIDATGAD---VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp CEEEEEECCCCC---THHHHHHGGGEEEEEEEEECSC
T ss_pred CCCEEEECCCCh---HHHHHHHHHHHhcCCEEEEEec
Confidence 799998654322 245 778899999999987543
No 395
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.44 E-value=0.32 Score=32.89 Aligned_cols=97 Identities=8% Similarity=0.006 Sum_probs=58.3
Q ss_pred CCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCc-hHHHHHHHHHHHcCCCCceEEEeCCchH--HHHHHhhcccCCC
Q 029836 20 AKNTMEIGVFTGYSLLATALAIP-DDGKILALDITK-EHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDEKYHG 95 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~-~~~~~a~~~~~~~~~~~~i~~~~~d~~~--~l~~~~~~~~~~~ 95 (187)
.++++-+|+ |..+..+++.+. .+..|+.+|.++ +..+...+... ..+.++.+|+.+ .+.... -+
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~-----~~~~~i~gd~~~~~~l~~a~-----i~ 70 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-----DNADVIPGDSNDSSVLKKAG-----ID 70 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-----TTCEEEESCTTSHHHHHHHT-----TT
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc-----CCCeEEEcCCCCHHHHHHcC-----hh
Confidence 457888875 777777666553 246899999974 44444333221 357788898754 333321 35
Q ss_pred ceeEEEEcCCCcccHHHHHHHHhcccCCeEEEE
Q 029836 96 TFDFVFVDADKDNYVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 96 ~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
..|.|++-..............+.+.+...++.
T Consensus 71 ~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 71 RCRAILALSDNDADNAFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp TCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEE
T ss_pred hCCEEEEecCChHHHHHHHHHHHHHCCCCEEEE
Confidence 789999865433334444445566666666654
No 396
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=94.39 E-value=0.16 Score=40.13 Aligned_cols=99 Identities=18% Similarity=0.167 Sum_probs=56.3
Q ss_pred cCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCc
Q 029836 18 INAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGT 96 (187)
Q Consensus 18 ~~~~~vLeiG~g-~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~ 96 (187)
.++++|+-+|+| .|......+..+ +.+|+++|.+++..+.+++.+ +. .+.....+..+ +.... ..
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~--Ga~V~~~d~~~~~l~~~~~~~---g~--~~~~~~~~~~~-l~~~l------~~ 231 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGM--GATVTVLDINIDKLRQLDAEF---CG--RIHTRYSSAYE-LEGAV------KR 231 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHT---TT--SSEEEECCHHH-HHHHH------HH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhc---CC--eeEeccCCHHH-HHHHH------cC
Confidence 457899999984 233334445554 469999999998776665433 32 22222222222 22321 35
Q ss_pred eeEEEEcCC-Cc--ccHHHHHHHHhcccCCeEEEEeC
Q 029836 97 FDFVFVDAD-KD--NYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 97 ~D~v~~d~~-~~--~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.|+|+.-.. +. ...-+.+...+.|++||+++--.
T Consensus 232 aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 232 ADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 799987432 11 11112355677899999987543
No 397
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=94.25 E-value=0.047 Score=41.97 Aligned_cols=92 Identities=9% Similarity=0.025 Sum_probs=60.3
Q ss_pred EEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeE
Q 029836 22 NTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDF 99 (187)
Q Consensus 22 ~vLeiG~--g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~ 99 (187)
+||-+|+ +.|..+..+++.. +.+|++++.+++..+.+++ .|. +. .+-..+. +....+ ..+.+|+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa-~~-vi~~~~~-~~~~~~-----~~~~~d~ 214 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL--GYQVAAVSGRESTHGYLKS----LGA-NR-ILSRDEF-AESRPL-----EKQLWAG 214 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHHHHH----HTC-SE-EEEGGGS-SCCCSS-----CCCCEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCC-CE-EEecCCH-HHHHhh-----cCCCccE
Confidence 4999986 5788888899876 4699999999998887765 343 21 1111111 111111 1357998
Q ss_pred EEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 100 VFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 100 v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
||-... ...++.+.+.|+++|.++.-..
T Consensus 215 v~d~~g----~~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 215 AIDTVG----DKVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp EEESSC----HHHHHHHHHTEEEEEEEEECCC
T ss_pred EEECCC----cHHHHHHHHHHhcCCEEEEEec
Confidence 774322 2378888999999999987543
No 398
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=94.23 E-value=0.13 Score=40.91 Aligned_cols=46 Identities=15% Similarity=0.140 Sum_probs=36.1
Q ss_pred CEEEEEcccccHHHHHHHhhCC------CCCEEEEEeCCchHHHHHHHHHHH
Q 029836 21 KNTMEIGVFTGYSLLATALAIP------DDGKILALDITKEHYEKGLPIIQK 66 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~l~~~~~------~~~~v~~vd~~~~~~~~a~~~~~~ 66 (187)
-.|+|+|+|.|..+..+++.+. ...+++.||+|+...+.-++.+..
T Consensus 82 ~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 133 (387)
T 1zkd_A 82 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAG 133 (387)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTT
T ss_pred cEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcC
Confidence 3799999999999998876542 135899999999888766666544
No 399
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.19 E-value=0.42 Score=32.39 Aligned_cols=97 Identities=12% Similarity=-0.007 Sum_probs=54.3
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchH--HHHHHhhcccCC
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDEKYH 94 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~--~l~~~~~~~~~~ 94 (187)
...++|+-+|+ |.++..++..+. .+.+|+++|.+++.++.+++ . ....++.++..+ .+... . -
T Consensus 17 ~~~~~v~IiG~--G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~----~g~~~~~~d~~~~~~l~~~---~--~ 82 (155)
T 2g1u_A 17 QKSKYIVIFGC--GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---E----FSGFTVVGDAAEFETLKEC---G--M 82 (155)
T ss_dssp CCCCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---T----CCSEEEESCTTSHHHHHTT---T--G
T ss_pred cCCCcEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---c----CCCcEEEecCCCHHHHHHc---C--c
Confidence 45679999987 555555554432 24689999999877654321 1 234556666533 22221 0 2
Q ss_pred CceeEEEEcCCCcccHHHHHHHHhcccCCeEEEE
Q 029836 95 GTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 95 ~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
..+|+|++-............+.+.+.+...++.
T Consensus 83 ~~ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 83 EKADMVFAFTNDDSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp GGCSEEEECSSCHHHHHHHHHHHHHTSCCSEEEE
T ss_pred ccCCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEE
Confidence 4689999865433333333334444455555554
No 400
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=94.18 E-value=0.87 Score=33.03 Aligned_cols=94 Identities=13% Similarity=-0.015 Sum_probs=59.6
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchH--HHHHHhhcccCCCc
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDEKYHGT 96 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~--~l~~~~~~~~~~~~ 96 (187)
..++++-+|+ |..+..+++.+...+.|+.+|.+++.++.++ ..+.++.+|+.+ .+.... -..
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~~~~~---------~~~~~i~gd~~~~~~l~~a~-----i~~ 71 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVLR---------SGANFVHGDPTRVSDLEKAN-----VRG 71 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHHHHHH---------TTCEEEESCTTCHHHHHHTT-----CTT
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHHHHHh---------cCCeEEEcCCCCHHHHHhcC-----cch
Confidence 3468999887 7888888888753323999999988765443 146788888864 333321 357
Q ss_pred eeEEEEcCCCcccHHHHHHHHhcccCCeEEEE
Q 029836 97 FDFVFVDADKDNYVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 97 ~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
.|.|++-..........-...+.+.++..+++
T Consensus 72 ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia 103 (234)
T 2aef_A 72 ARAVIVDLESDSETIHCILGIRKIDESVRIIA 103 (234)
T ss_dssp CSEEEECCSCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred hcEEEEcCCCcHHHHHHHHHHHHHCCCCeEEE
Confidence 89998865433333334444566777756654
No 401
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=94.10 E-value=0.48 Score=32.13 Aligned_cols=96 Identities=14% Similarity=-0.029 Sum_probs=51.5
Q ss_pred ccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCC-
Q 029836 28 VFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADK- 106 (187)
Q Consensus 28 ~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~- 106 (187)
.|.+.+............+|..+|-++......+..+...+. ..+.....+..+.+..+. ...+|+|++|...
T Consensus 9 ~~~~~~~~~~~~M~~~~~~ILivdd~~~~~~~l~~~L~~~~~-~~~v~~~~~~~~al~~l~-----~~~~dlvilD~~l~ 82 (164)
T 3t8y_A 9 HHSSGLVPRGSHMTDRVIRVLVVDDSAFMRMVLKDIIDSQPD-MKVVGFAKDGLEAVEKAI-----ELKPDVITMDIEMP 82 (164)
T ss_dssp ---------------CCEEEEEECSCHHHHHHHHHHHHTSTT-EEEEEEESSHHHHHHHHH-----HHCCSEEEECSSCS
T ss_pred cccCCcccCccccccCccEEEEEcCCHHHHHHHHHHHhcCCC-eEEEEecCCHHHHHHHhc-----cCCCCEEEEeCCCC
Confidence 455666666555433346899999999999988888887542 122223556666665553 3469999999762
Q ss_pred -cccHHHHHHHHhcccCCeEEEEeC
Q 029836 107 -DNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 107 -~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
.+-.++++.+...- +--++++..
T Consensus 83 ~~~g~~l~~~lr~~~-~~~ii~~s~ 106 (164)
T 3t8y_A 83 NLNGIEALKLIMKKA-PTRVIMVSS 106 (164)
T ss_dssp SSCHHHHHHHHHHHS-CCEEEEEES
T ss_pred CCCHHHHHHHHHhcC-CceEEEEec
Confidence 23455666655433 344555544
No 402
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=94.00 E-value=0.35 Score=37.52 Aligned_cols=97 Identities=6% Similarity=-0.148 Sum_probs=56.9
Q ss_pred CEEEEEc-c-cccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCcee
Q 029836 21 KNTMEIG-V-FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFD 98 (187)
Q Consensus 21 ~~vLeiG-~-g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D 98 (187)
+++|-.| + +.|..+..+++.. +.+|++++.+++..+.+++ .|. + .++..+..++...+.+.. ....+|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga-~--~~~~~~~~~~~~~v~~~~-~~~g~D 235 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE--GFRPIVTVRRDEQIALLKD----IGA-A--HVLNEKAPDFEATLREVM-KAEQPR 235 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHH----HTC-S--EEEETTSTTHHHHHHHHH-HHHCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCC-C--EEEECCcHHHHHHHHHHh-cCCCCc
Confidence 5666543 2 3455666677765 4699999999988877764 343 1 222222222222221110 013699
Q ss_pred EEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 99 FVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 99 ~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
+||-... ...+..+.+.|+++|.++.-..
T Consensus 236 ~vid~~g----~~~~~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 236 IFLDAVT----GPLASAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp EEEESSC----HHHHHHHHHHSCTTCEEEECCC
T ss_pred EEEECCC----ChhHHHHHhhhcCCCEEEEEec
Confidence 9885432 2334778899999999987543
No 403
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.98 E-value=0.37 Score=34.68 Aligned_cols=93 Identities=14% Similarity=0.040 Sum_probs=56.9
Q ss_pred EEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchH--HHHHHhhcccCCCcee
Q 029836 22 NTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDEKYHGTFD 98 (187)
Q Consensus 22 ~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~--~l~~~~~~~~~~~~~D 98 (187)
+|+-+|+ |..+..+++.+. .+..|+.+|.+++.++...+ . ..+.++.+|+.+ .+.... -...|
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~---~----~~~~~i~gd~~~~~~l~~a~-----i~~ad 67 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAK---K----LKATIIHGDGSHKEILRDAE-----VSKND 67 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---H----SSSEEEESCTTSHHHHHHHT-----CCTTC
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH---H----cCCeEEEcCCCCHHHHHhcC-----cccCC
Confidence 5777775 777777766552 24689999999987765432 1 145678888765 343321 35789
Q ss_pred EEEEcCCCcccHHHHHHHHhcccCCeEEEE
Q 029836 99 FVFVDADKDNYVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 99 ~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
+|++-..............+.+.+...++.
T Consensus 68 ~vi~~~~~d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 68 VVVILTPRDEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp EEEECCSCHHHHHHHHHHHHHTSCCCEEEE
T ss_pred EEEEecCCcHHHHHHHHHHHHHcCCCeEEE
Confidence 998866544333444444454555555554
No 404
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=93.95 E-value=0.1 Score=39.99 Aligned_cols=87 Identities=11% Similarity=0.052 Sum_probs=56.0
Q ss_pred cCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCc
Q 029836 18 INAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGT 96 (187)
Q Consensus 18 ~~~~~vLeiG~g-~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~ 96 (187)
.+.++||-+|+| .|..+..+++.. +.+|++++ +++..+.+++ .|. -.++. | ...+ .+.
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~-~~~~~~~~~~----lGa---~~v~~-d----~~~v------~~g 199 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNA--GYVVDLVS-ASLSQALAAK----RGV---RHLYR-E----PSQV------TQK 199 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHH--TCEEEEEC-SSCCHHHHHH----HTE---EEEES-S----GGGC------CSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEE-ChhhHHHHHH----cCC---CEEEc-C----HHHh------CCC
Confidence 456899999985 467778888876 46999999 8888877755 343 12222 3 1222 357
Q ss_pred eeEEEEcCCCcccHHHHHHHHhcccCCeEEEEe
Q 029836 97 FDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 97 ~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
+|+||-.... ..+..+.+.|+++|.++.-
T Consensus 200 ~Dvv~d~~g~----~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 200 YFAIFDAVNS----QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp EEEEECC-----------TTGGGEEEEEEEEEE
T ss_pred ccEEEECCCc----hhHHHHHHHhcCCCEEEEE
Confidence 9998843221 1235678899999998864
No 405
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=93.76 E-value=0.34 Score=38.00 Aligned_cols=97 Identities=16% Similarity=0.092 Sum_probs=59.1
Q ss_pred hcCCCEEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCC
Q 029836 17 LINAKNTMEIG--VFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYH 94 (187)
Q Consensus 17 ~~~~~~vLeiG--~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~ 94 (187)
..+.++||-+| .+.|..+..+++.. +.+|++++ +++..+.+ ++.|.. .++..+..++...+.. .
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~--Ga~Vi~~~-~~~~~~~~----~~lGa~---~v~~~~~~~~~~~~~~----~ 246 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW--DAHVTAVC-SQDASELV----RKLGAD---DVIDYKSGSVEEQLKS----L 246 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHH----HHTTCS---EEEETTSSCHHHHHHT----S
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEe-ChHHHHHH----HHcCCC---EEEECCchHHHHHHhh----c
Confidence 34567999999 35677788888875 46899988 66655554 345542 1222222223333321 2
Q ss_pred CceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEe
Q 029836 95 GTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 95 ~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
..+|+||-..... ...+..+.+.|++||.++.-
T Consensus 247 ~g~D~vid~~g~~--~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 247 KPFDFILDNVGGS--TETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp CCBSEEEESSCTT--HHHHGGGGBCSSSCCEEEES
T ss_pred CCCCEEEECCCCh--hhhhHHHHHhhcCCcEEEEe
Confidence 4799988543211 13456777899999999864
No 406
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.62 E-value=0.31 Score=38.64 Aligned_cols=102 Identities=23% Similarity=0.219 Sum_probs=60.6
Q ss_pred CCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEe---------CCc--------
Q 029836 19 NAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFRE---------GPA-------- 80 (187)
Q Consensus 19 ~~~~vLeiG~g-~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~---------~d~-------- 80 (187)
++.+|+-||+| .|..+..++..+ +.+|+++|.++...+.+++ .|. ++.. +..
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~----lGa----~~~~l~~~~~~~~gya~~~~~~~~ 252 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL--GAKTTGYDVRPEVAEQVRS----VGA----QWLDLGIDAAGEGGYARELSEAER 252 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSGGGHHHHHH----TTC----EECCCC-------------CHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCC----eEEeccccccccccchhhhhHHHH
Confidence 67899999997 445555566665 4689999999988776654 222 1211 111
Q ss_pred ---hHHHHHHhhcccCCCceeEEEEcCC---CcccHHHHHHHHhcccCCeEEEEeCcCCCcc
Q 029836 81 ---LPLLDQLIQDEKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTLWGGS 136 (187)
Q Consensus 81 ---~~~l~~~~~~~~~~~~~D~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~ 136 (187)
.+.+.+. -...|+|+.-.. .....-+-+...+.+|||++|+=-.+..+|.
T Consensus 253 ~~~~~~l~e~------l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~ 308 (381)
T 3p2y_A 253 AQQQQALEDA------ITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGN 308 (381)
T ss_dssp HHHHHHHHHH------HTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCS
T ss_pred hhhHHHHHHH------HhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCc
Confidence 1122222 246899986421 1111112357778899999887655544444
No 407
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.59 E-value=0.31 Score=38.31 Aligned_cols=98 Identities=13% Similarity=0.154 Sum_probs=56.0
Q ss_pred cCCCEEEEEcccccHHHHH---HHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCC
Q 029836 18 INAKNTMEIGVFTGYSLLA---TALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYH 94 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~---l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~ 94 (187)
.++++|+-+|+ |..+.. .+..+ +.+|+++|.+++..+.+++.+ +. .+.....+..+ +....
T Consensus 164 l~~~~V~ViGa--G~iG~~~a~~l~~~--Ga~V~~~d~~~~~~~~~~~~~---g~--~~~~~~~~~~~-l~~~~------ 227 (369)
T 2eez_A 164 VAPASVVILGG--GTVGTNAAKIALGM--GAQVTILDVNHKRLQYLDDVF---GG--RVITLTATEAN-IKKSV------ 227 (369)
T ss_dssp BCCCEEEEECC--SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHT---TT--SEEEEECCHHH-HHHHH------
T ss_pred CCCCEEEEECC--CHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHhc---Cc--eEEEecCCHHH-HHHHH------
Confidence 45789999998 444444 44443 469999999988776554322 32 23333333322 33321
Q ss_pred CceeEEEEcCCCcc--cHH-HHHHHHhcccCCeEEEEeCc
Q 029836 95 GTFDFVFVDADKDN--YVN-YHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 95 ~~~D~v~~d~~~~~--~~~-~~~~~~~~L~~gG~lv~~~~ 131 (187)
...|+|+....... ... ..+...+.|++||+++.-..
T Consensus 228 ~~~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~ 267 (369)
T 2eez_A 228 QHADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAV 267 (369)
T ss_dssp HHCSEEEECCC-------CCSCHHHHTTSCTTCEEEECC-
T ss_pred hCCCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEec
Confidence 35799986543211 111 24566788999998875443
No 408
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=93.50 E-value=1.1 Score=34.55 Aligned_cols=93 Identities=14% Similarity=0.010 Sum_probs=59.9
Q ss_pred CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchH--HHHHHhhcccCCCce
Q 029836 20 AKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDEKYHGTF 97 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~--~l~~~~~~~~~~~~~ 97 (187)
.++++-+|+ |..+..+++.+...+.++.+|.+++.++ +++ ..+.+++||+.+ .+.+.. -+..
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~v~vid~~~~~~~-~~~--------~~~~~i~gd~~~~~~L~~a~-----i~~a 178 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKK-VLR--------SGANFVHGDPTRVSDLEKAN-----VRGA 178 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCEEEEESCGGGHHH-HHH--------TTCEEEESCTTSHHHHHHTC-----STTE
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCcEEEEeCChhhhh-HHh--------CCcEEEEeCCCCHHHHHhcC-----hhhc
Confidence 458998886 7888888877743333999999998876 543 357889999865 333321 3578
Q ss_pred eEEEEcCCCcccHHHHHHHHhcccCCeEEEE
Q 029836 98 DFVFVDADKDNYVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 98 D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
|.+++-.......-..-...+.+.|...++.
T Consensus 179 ~~vi~~~~~d~~n~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 179 RAVIVDLESDSETIHCILGIRKIDESVRIIA 209 (336)
T ss_dssp EEEEECCSSHHHHHHHHHHHHTTCTTSEEEE
T ss_pred cEEEEcCCccHHHHHHHHHHHHHCCCCeEEE
Confidence 9998865433323333344466777755554
No 409
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.46 E-value=0.62 Score=37.86 Aligned_cols=108 Identities=16% Similarity=0.062 Sum_probs=69.6
Q ss_pred HHHHHHHHHhh-cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchH--H
Q 029836 7 EAQFFSMLLKL-INAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--L 83 (187)
Q Consensus 7 ~~~~l~~l~~~-~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~--~ 83 (187)
..++++.+-.. .+.++|+-+|. |..+..+++.+....++..+|.+++.++.+.+.+ ++..+++||+.+ +
T Consensus 221 i~~~~~~~g~~~~~~~~v~I~Gg--G~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l------~~~~Vi~GD~td~~~ 292 (461)
T 4g65_A 221 IRSVMSELQRLEKPYRRIMIVGG--GNIGASLAKRLEQTYSVKLIERNLQRAEKLSEEL------ENTIVFCGDAADQEL 292 (461)
T ss_dssp HHHHHHHTTGGGSCCCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHC------TTSEEEESCTTCHHH
T ss_pred HHHHHHhhccccccccEEEEEcc--hHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHC------CCceEEeccccchhh
Confidence 34455544332 24578988876 6677888888876789999999999887766654 578899999976 3
Q ss_pred HHHHhhcccCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEE
Q 029836 84 LDQLIQDEKYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIG 127 (187)
Q Consensus 84 l~~~~~~~~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv 127 (187)
|.+. + -+..|+++.--......-+...+.+.+...-++.
T Consensus 293 L~ee---~--i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 293 LTEE---N--IDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp HHHT---T--GGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred Hhhc---C--chhhcEEEEcccCcHHHHHHHHHHHHcCCccccc
Confidence 4432 1 3578999976543333333334444454444443
No 410
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.37 E-value=0.38 Score=38.48 Aligned_cols=103 Identities=20% Similarity=0.206 Sum_probs=61.3
Q ss_pred CCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeC-------------Cc----
Q 029836 19 NAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREG-------------PA---- 80 (187)
Q Consensus 19 ~~~~vLeiG~g-~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~-------------d~---- 80 (187)
++.+|+-+|+| .|.....++..+ +.+|+++|.++..++.+++ .|. ++... .+
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~----~G~----~~~~~~~~~~~d~~~~~~ya~e~s 258 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL--GAVVSATDVRPAAKEQVAS----LGA----KFIAVEDEEFKAAETAGGYAKEMS 258 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSTTHHHHHHH----TTC----EECCCCC-----------------
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH----cCC----ceeecccccccccccccchhhhcc
Confidence 57899999997 455666667766 4699999999988776654 222 11110 00
Q ss_pred -------hHHHHHHhhcccCCCceeEEEEcCC---CcccHHHHHHHHhcccCCeEEEEeCcCCCccc
Q 029836 81 -------LPLLDQLIQDEKYHGTFDFVFVDAD---KDNYVNYHKRLIELVKVGGVIGYDNTLWGGSV 137 (187)
Q Consensus 81 -------~~~l~~~~~~~~~~~~~D~v~~d~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~ 137 (187)
...+.+. -...|+|+.-.. .....-+-+.+.+.+|||++|+=-.+..+|..
T Consensus 259 ~~~~~~~~~~l~e~------l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~ 319 (405)
T 4dio_A 259 GEYQVKQAALVAEH------IAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNI 319 (405)
T ss_dssp CHHHHHHHHHHHHH------HHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSB
T ss_pred hhhhhhhHhHHHHH------hcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCc
Confidence 0122222 136799986421 11111123577889999999875554454543
No 411
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=93.31 E-value=0.81 Score=28.84 Aligned_cols=80 Identities=16% Similarity=-0.022 Sum_probs=48.6
Q ss_pred CCEEEEEcccccHHHHHHHhhCC-CC-CEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchH--HHHHHhhcccCCC
Q 029836 20 AKNTMEIGVFTGYSLLATALAIP-DD-GKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDEKYHG 95 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~~~~~-~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~--~l~~~~~~~~~~~ 95 (187)
.++|+-+|+ |..+..++..+. .+ .+|+++|.+++..+.+. . ..+.+...|..+ .+... -.
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~----~~~~~~~~d~~~~~~~~~~------~~ 68 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R----MGVATKQVDAKDEAGLAKA------LG 68 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T----TTCEEEECCTTCHHHHHHH------TT
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h----CCCcEEEecCCCHHHHHHH------Hc
Confidence 458999998 666666554432 23 68999999987665443 1 345666666643 23333 24
Q ss_pred ceeEEEEcCCCcccHHHHHH
Q 029836 96 TFDFVFVDADKDNYVNYHKR 115 (187)
Q Consensus 96 ~~D~v~~d~~~~~~~~~~~~ 115 (187)
.+|+|+.-.+........+.
T Consensus 69 ~~d~vi~~~~~~~~~~~~~~ 88 (118)
T 3ic5_A 69 GFDAVISAAPFFLTPIIAKA 88 (118)
T ss_dssp TCSEEEECSCGGGHHHHHHH
T ss_pred CCCEEEECCCchhhHHHHHH
Confidence 68999976654333333333
No 412
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=93.27 E-value=0.43 Score=37.19 Aligned_cols=98 Identities=11% Similarity=0.046 Sum_probs=58.1
Q ss_pred hhcCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCC--chHHHHHHhhccc
Q 029836 16 KLINAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGP--ALPLLDQLIQDEK 92 (187)
Q Consensus 16 ~~~~~~~vLeiG~g-~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d--~~~~l~~~~~~~~ 92 (187)
...+.++||-+|+| .|..+..+++..+ +.+|++++.+++..+.+++ .|. +. ++.-. ..+.+..+..
T Consensus 183 ~~~~g~~VlV~GaG~vG~~avqlak~~~-Ga~Vi~~~~~~~~~~~~~~----lGa-~~--vi~~~~~~~~~v~~~~~--- 251 (359)
T 1h2b_A 183 TLYPGAYVAIVGVGGLGHIAVQLLKVMT-PATVIALDVKEEKLKLAER----LGA-DH--VVDARRDPVKQVMELTR--- 251 (359)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESSHHHHHHHHH----TTC-SE--EEETTSCHHHHHHHHTT---
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEeCCHHHHHHHHH----hCC-CE--EEeccchHHHHHHHHhC---
Confidence 34466899999974 3445666777652 3689999999988776653 453 22 22221 1122333310
Q ss_pred CCCceeEEEEcCCCcccHH--HHHHHHhcccCCeEEEEeC
Q 029836 93 YHGTFDFVFVDADKDNYVN--YHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 93 ~~~~~D~v~~d~~~~~~~~--~~~~~~~~L~~gG~lv~~~ 130 (187)
...+|+||--.. ... .++.+.+. ++|.++.-.
T Consensus 252 -g~g~Dvvid~~G---~~~~~~~~~~~~~--~~G~~v~~g 285 (359)
T 1h2b_A 252 -GRGVNVAMDFVG---SQATVDYTPYLLG--RMGRLIIVG 285 (359)
T ss_dssp -TCCEEEEEESSC---CHHHHHHGGGGEE--EEEEEEECC
T ss_pred -CCCCcEEEECCC---CchHHHHHHHhhc--CCCEEEEEe
Confidence 227999985332 223 56666666 899888644
No 413
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=93.25 E-value=0.52 Score=36.88 Aligned_cols=81 Identities=17% Similarity=0.054 Sum_probs=50.4
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchH--HHHHHhhcccCCCc
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDEKYHGT 96 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~--~l~~~~~~~~~~~~ 96 (187)
+.++|+-+|| |..+..+++.+.....|+..|.+.+.++.+++ .+..+..|+.+ .+..+. ..
T Consensus 15 ~~mkilvlGa--G~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~---------~~~~~~~d~~d~~~l~~~~------~~ 77 (365)
T 3abi_A 15 RHMKVLILGA--GNIGRAIAWDLKDEFDVYIGDVNNENLEKVKE---------FATPLKVDASNFDKLVEVM------KE 77 (365)
T ss_dssp -CCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHTT---------TSEEEECCTTCHHHHHHHH------TT
T ss_pred CccEEEEECC--CHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhc---------cCCcEEEecCCHHHHHHHH------hC
Confidence 3468999998 77777777777666889999999877665432 34444555533 334432 36
Q ss_pred eeEEEEcCCCcccHHHHHHH
Q 029836 97 FDFVFVDADKDNYVNYHKRL 116 (187)
Q Consensus 97 ~D~v~~d~~~~~~~~~~~~~ 116 (187)
.|+|+.-.+........+.|
T Consensus 78 ~DvVi~~~p~~~~~~v~~~~ 97 (365)
T 3abi_A 78 FELVIGALPGFLGFKSIKAA 97 (365)
T ss_dssp CSEEEECCCGGGHHHHHHHH
T ss_pred CCEEEEecCCcccchHHHHH
Confidence 79988765433333444443
No 414
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=93.25 E-value=0.96 Score=29.05 Aligned_cols=79 Identities=14% Similarity=0.011 Sum_probs=51.0
Q ss_pred CEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCC--cccHHHHHHHHhcccC
Q 029836 45 GKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADK--DNYVNYHKRLIELVKV 122 (187)
Q Consensus 45 ~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~--~~~~~~~~~~~~~L~~ 122 (187)
.++..+|-++...+..++.+...|. .+.....+..+.+..+. ...+|+|++|... .+-.++++.+...-..
T Consensus 2 ~~ilivdd~~~~~~~l~~~L~~~g~--~v~~~~~~~~~a~~~~~-----~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~ 74 (134)
T 3f6c_A 2 LNAIIIDDHPLAIAAIRNLLIKNDI--EILAELTEGGSAVQRVE-----TLKPDIVIIDVDIPGVNGIQVLETLRKRQYS 74 (134)
T ss_dssp EEEEEECCCHHHHHHHHHHHHHTTE--EEEEEESSSTTHHHHHH-----HHCCSEEEEETTCSSSCHHHHHHHHHHTTCC
T ss_pred eEEEEEcCCHHHHHHHHHHHhhCCc--EEEEEcCCHHHHHHHHH-----hcCCCEEEEecCCCCCChHHHHHHHHhcCCC
Confidence 3688899999999999999988753 33323455555555443 3479999999762 3345667766654333
Q ss_pred CeEEEEeC
Q 029836 123 GGVIGYDN 130 (187)
Q Consensus 123 gG~lv~~~ 130 (187)
--++++.+
T Consensus 75 ~~ii~~s~ 82 (134)
T 3f6c_A 75 GIIIIVSA 82 (134)
T ss_dssp SEEEEEEC
T ss_pred CeEEEEeC
Confidence 33555543
No 415
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=93.16 E-value=0.36 Score=37.13 Aligned_cols=88 Identities=18% Similarity=0.203 Sum_probs=55.8
Q ss_pred CEEEEEcccccHHHHHHHhhCC-CCC--EEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchH-HHHHHhhcccCCCc
Q 029836 21 KNTMEIGVFTGYSLLATALAIP-DDG--KILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP-LLDQLIQDEKYHGT 96 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~l~~~~~-~~~--~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~l~~~~~~~~~~~~ 96 (187)
++|.-||+| ..+..++..+. .+. +|+++|.+++.++.+++ .|... . ...+..+ .+ ..
T Consensus 34 ~kI~IIG~G--~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~----~G~~~--~-~~~~~~~~~~----------~~ 94 (314)
T 3ggo_A 34 QNVLIVGVG--FMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LGIID--E-GTTSIAKVED----------FS 94 (314)
T ss_dssp SEEEEESCS--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TTSCS--E-EESCTTGGGG----------GC
T ss_pred CEEEEEeeC--HHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH----CCCcc--h-hcCCHHHHhh----------cc
Confidence 689999875 44444433321 123 89999999987766543 34311 1 1233322 21 35
Q ss_pred eeEEEEcCCCcccHHHHHHHHhcccCCeEEE
Q 029836 97 FDFVFVDADKDNYVNYHKRLIELVKVGGVIG 127 (187)
Q Consensus 97 ~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv 127 (187)
.|+|++-.+.......++.+.+.+++|.+++
T Consensus 95 aDvVilavp~~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 95 PDFVMLSSPVRTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHHSCTTCEEE
T ss_pred CCEEEEeCCHHHHHHHHHHHhhccCCCcEEE
Confidence 7999987776667788888888899988664
No 416
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=93.14 E-value=1.2 Score=29.80 Aligned_cols=81 Identities=14% Similarity=0.050 Sum_probs=52.9
Q ss_pred CEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCC--cccHHHHHHHHhcccC
Q 029836 45 GKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADK--DNYVNYHKRLIELVKV 122 (187)
Q Consensus 45 ~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~--~~~~~~~~~~~~~L~~ 122 (187)
.+|..+|-++...+..++.++..|. ++.....+..+.+..+... ...+|+|++|... .+-.++++.+...-..
T Consensus 37 ~~Ilivdd~~~~~~~l~~~L~~~g~--~v~~~~~~~~~al~~l~~~---~~~~dliilD~~l~~~~g~~~~~~lr~~~~~ 111 (157)
T 3hzh_A 37 FNVLIVDDSVFTVKQLTQIFTSEGF--NIIDTAADGEEAVIKYKNH---YPNIDIVTLXITMPKMDGITCLSNIMEFDKN 111 (157)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHH---GGGCCEEEECSSCSSSCHHHHHHHHHHHCTT
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHhc---CCCCCEEEEeccCCCccHHHHHHHHHhhCCC
Confidence 3799999999999999999988764 3332456666666655321 1278999999762 3345666666654433
Q ss_pred CeEEEEeC
Q 029836 123 GGVIGYDN 130 (187)
Q Consensus 123 gG~lv~~~ 130 (187)
--++++.+
T Consensus 112 ~~ii~ls~ 119 (157)
T 3hzh_A 112 ARVIMISA 119 (157)
T ss_dssp CCEEEEES
T ss_pred CcEEEEec
Confidence 34555543
No 417
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=93.08 E-value=1.4 Score=32.83 Aligned_cols=84 Identities=12% Similarity=0.190 Sum_probs=56.2
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH--HHHHhhcc-cC
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDE-KY 93 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--l~~~~~~~-~~ 93 (187)
.+.|.+|-.|.+.|. +..+++.+. .+++|+.+|.+++.++.+.+.++..+ .++.++++|..+. ...+.+.. ..
T Consensus 5 L~gKvalVTGas~GI-G~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~ 81 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGI-GRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG--KEVLGVKADVSKKKDVEEFVRRTFET 81 (254)
T ss_dssp GTTCEEEEETTTSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHH-HHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 467889999976654 444444432 36899999999999988888888776 4788888886432 22221111 01
Q ss_pred CCceeEEEEcC
Q 029836 94 HGTFDFVFVDA 104 (187)
Q Consensus 94 ~~~~D~v~~d~ 104 (187)
.++.|+++..+
T Consensus 82 ~G~iDiLVNNA 92 (254)
T 4fn4_A 82 YSRIDVLCNNA 92 (254)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 46899998764
No 418
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=93.06 E-value=2 Score=31.71 Aligned_cols=80 Identities=10% Similarity=0.110 Sum_probs=53.1
Q ss_pred cCCCEEEEEccc----ccH-HHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH------HHH
Q 029836 18 INAKNTMEIGVF----TGY-SLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL------LDQ 86 (187)
Q Consensus 18 ~~~~~vLeiG~g----~G~-~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~------l~~ 86 (187)
.+.+++|-.|++ .|. .+..|++. +++|+.++.+++..+.+.+.+++.+- .++.+++.|..+. +..
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~---Ga~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~ 79 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQL---GAKLVFTYRKERSRKELEKLLEQLNQ-PEAHLYQIDVQSDEEVINGFEQ 79 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHT---TCEEEEEESSGGGHHHHHHHHGGGTC-SSCEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCC-CcEEEEEccCCCHHHHHHHHHH
Confidence 467899999953 343 23334433 68999999999988888888877654 4678888876431 222
Q ss_pred HhhcccCCCceeEEEEcC
Q 029836 87 LIQDEKYHGTFDFVFVDA 104 (187)
Q Consensus 87 ~~~~~~~~~~~D~v~~d~ 104 (187)
..+. .+..|+++...
T Consensus 80 ~~~~---~G~iD~lvnnA 94 (256)
T 4fs3_A 80 IGKD---VGNIDGVYHSI 94 (256)
T ss_dssp HHHH---HCCCSEEEECC
T ss_pred HHHH---hCCCCEEEecc
Confidence 2211 46899998764
No 419
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=93.06 E-value=0.93 Score=32.80 Aligned_cols=94 Identities=16% Similarity=0.130 Sum_probs=55.9
Q ss_pred CCEEEEEcccccHHHHHHHhhCCC-C-CEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchH--HHHHHhhcccCCC
Q 029836 20 AKNTMEIGVFTGYSLLATALAIPD-D-GKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDEKYHG 95 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~~~~~~-~-~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~--~l~~~~~~~~~~~ 95 (187)
.++||-+| |+|.++..+++.+.. + .+|++++.+++.... -...+++++.+|..+ .+.... .
T Consensus 23 mk~vlVtG-atG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~--------~~~~~~~~~~~Dl~d~~~~~~~~------~ 87 (236)
T 3qvo_A 23 MKNVLILG-AGGQIARHVINQLADKQTIKQTLFARQPAKIHK--------PYPTNSQIIMGDVLNHAALKQAM------Q 87 (236)
T ss_dssp CEEEEEET-TTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS--------SCCTTEEEEECCTTCHHHHHHHH------T
T ss_pred ccEEEEEe-CCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc--------cccCCcEEEEecCCCHHHHHHHh------c
Confidence 35678777 667778887776643 3 589999988764321 112478899998765 233332 3
Q ss_pred ceeEEEEcCCCcccHHHHHHHHhcccC--CeEEEE
Q 029836 96 TFDFVFVDADKDNYVNYHKRLIELVKV--GGVIGY 128 (187)
Q Consensus 96 ~~D~v~~d~~~~~~~~~~~~~~~~L~~--gG~lv~ 128 (187)
..|.||............+.+.+.++. .+.||+
T Consensus 88 ~~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~ 122 (236)
T 3qvo_A 88 GQDIVYANLTGEDLDIQANSVIAAMKACDVKRLIF 122 (236)
T ss_dssp TCSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEE
Confidence 579999766544333333344443332 244554
No 420
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.85 E-value=0.46 Score=37.25 Aligned_cols=95 Identities=12% Similarity=0.040 Sum_probs=58.6
Q ss_pred CCEEEEEcccccHHHHHHHhhCCC-CCEEEEEeCCchHHHHHHHHHH------HcCCCCceEEEeCCchHHHHHHhhccc
Q 029836 20 AKNTMEIGVFTGYSLLATALAIPD-DGKILALDITKEHYEKGLPIIQ------KAGVAHKIDFREGPALPLLDQLIQDEK 92 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~~~~~~-~~~v~~vd~~~~~~~~a~~~~~------~~~~~~~i~~~~~d~~~~l~~~~~~~~ 92 (187)
..+|.-||+ |.++..++..+.. +..|+..+.+++.++..++.-. ...++.++++. .|..+.+
T Consensus 29 ~mkI~VIGa--G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t-~d~~ea~-------- 97 (356)
T 3k96_A 29 KHPIAILGA--GSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAY-CDLKASL-------- 97 (356)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEE-SCHHHHH--------
T ss_pred CCeEEEECc--cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEE-CCHHHHH--------
Confidence 457889988 5555555544432 3579999999887765544211 11112233332 2332221
Q ss_pred CCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEE
Q 029836 93 YHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIG 127 (187)
Q Consensus 93 ~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv 127 (187)
...|+|++--+.....+.++.+.+.++++.+++
T Consensus 98 --~~aDvVilaVp~~~~~~vl~~i~~~l~~~~ivv 130 (356)
T 3k96_A 98 --EGVTDILIVVPSFAFHEVITRMKPLIDAKTRIA 130 (356)
T ss_dssp --TTCCEEEECCCHHHHHHHHHHHGGGCCTTCEEE
T ss_pred --hcCCEEEECCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 356999987766667778888888999888765
No 421
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=92.77 E-value=1.2 Score=29.39 Aligned_cols=81 Identities=9% Similarity=-0.042 Sum_probs=53.2
Q ss_pred CCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCC--CcccHHHHHHHHhccc
Q 029836 44 DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDAD--KDNYVNYHKRLIELVK 121 (187)
Q Consensus 44 ~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~--~~~~~~~~~~~~~~L~ 121 (187)
..+|..+|-++...+..+..+...+. ..+.....+..+.+..+. ...+|+|++|.. ..+-.++++.+.+.-.
T Consensus 15 ~~~iLivdd~~~~~~~l~~~L~~~~~-~~~v~~~~~~~~a~~~l~-----~~~~dlii~d~~l~~~~g~~~~~~l~~~~~ 88 (152)
T 3eul_A 15 KVRVVVGDDHPLFREGVVRALSLSGS-VNVVGEADDGAAALELIK-----AHLPDVALLDYRMPGMDGAQVAAAVRSYEL 88 (152)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHSS-EEEEEEESSHHHHHHHHH-----HHCCSEEEEETTCSSSCHHHHHHHHHHTTC
T ss_pred eEEEEEEcCCHHHHHHHHHHHhhCCC-eEEEEEeCCHHHHHHHHH-----hcCCCEEEEeCCCCCCCHHHHHHHHHhcCC
Confidence 57899999999999999999988753 122224556666665553 347999999976 2344566776665433
Q ss_pred CCeEEEEeC
Q 029836 122 VGGVIGYDN 130 (187)
Q Consensus 122 ~gG~lv~~~ 130 (187)
.--++++.+
T Consensus 89 ~~~ii~~s~ 97 (152)
T 3eul_A 89 PTRVLLISA 97 (152)
T ss_dssp SCEEEEEES
T ss_pred CCeEEEEEc
Confidence 334555544
No 422
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=92.73 E-value=0.65 Score=38.13 Aligned_cols=87 Identities=15% Similarity=0.192 Sum_probs=52.4
Q ss_pred cCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCc
Q 029836 18 INAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGT 96 (187)
Q Consensus 18 ~~~~~vLeiG~g-~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~ 96 (187)
..+++|+-+|+| .|......++.+ +.+|+++|.++...+.+++ .|. ++ .+..+.+ ..
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~--Ga~Viv~d~~~~~~~~A~~----~Ga----~~--~~l~e~l----------~~ 329 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQ--GARVSVTEIDPINALQAMM----EGF----DV--VTVEEAI----------GD 329 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH----TTC----EE--CCHHHHG----------GG
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCC----EE--ecHHHHH----------hC
Confidence 467899999985 333444445554 4699999999987665543 333 22 2332221 35
Q ss_pred eeEEEEcCCCcccHHHHHHHHhcccCCeEEEE
Q 029836 97 FDFVFVDADKDNYVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 97 ~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
.|+|+......... -....+.||+||+++-
T Consensus 330 aDvVi~atgt~~~i--~~~~l~~mk~ggilvn 359 (494)
T 3ce6_A 330 ADIVVTATGNKDII--MLEHIKAMKDHAILGN 359 (494)
T ss_dssp CSEEEECSSSSCSB--CHHHHHHSCTTCEEEE
T ss_pred CCEEEECCCCHHHH--HHHHHHhcCCCcEEEE
Confidence 79998764322211 1245567899998874
No 423
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.69 E-value=0.41 Score=37.86 Aligned_cols=42 Identities=21% Similarity=0.246 Sum_probs=30.4
Q ss_pred CCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHH
Q 029836 19 NAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGLP 62 (187)
Q Consensus 19 ~~~~vLeiG~g-~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~ 62 (187)
++++|+-+|+| .|..+..+++.++ .+|+.+|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G--a~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLG--AVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 57899999986 3444555666654 689999999887766543
No 424
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=92.59 E-value=2.4 Score=31.48 Aligned_cols=109 Identities=17% Similarity=0.193 Sum_probs=63.9
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCC------------chHHHHHHHHHHHcCCCCceEEEeCCchHH-
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDIT------------KEHYEKGLPIIQKAGVAHKIDFREGPALPL- 83 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~------------~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~- 83 (187)
.+.+++|-.|++ |.++..+++.+. .+.+|+.+|.+ .+.++.+.+.+...+ .++.++.+|..+.
T Consensus 8 l~gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~ 84 (287)
T 3pxx_A 8 VQDKVVLVTGGA-RGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--RKAYTAEVDVRDRA 84 (287)
T ss_dssp TTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--SCEEEEECCTTCHH
T ss_pred cCCCEEEEeCCC-ChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC--CceEEEEccCCCHH
Confidence 356788988865 445555554442 25799999987 555666666666554 4788888887542
Q ss_pred -HHHHhhcc-cCCCceeEEEEcCCC---------ccc-----------HHHHHHHHhcccCCeEEEEe
Q 029836 84 -LDQLIQDE-KYHGTFDFVFVDADK---------DNY-----------VNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 84 -l~~~~~~~-~~~~~~D~v~~d~~~---------~~~-----------~~~~~~~~~~L~~gG~lv~~ 129 (187)
+..+.+.. ...+.+|+++..+.. +.+ ....+.+.+.++++|.++.-
T Consensus 85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 85 AVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 22221110 002578999876531 111 12334556777788877754
No 425
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.56 E-value=0.4 Score=38.26 Aligned_cols=41 Identities=22% Similarity=0.222 Sum_probs=30.3
Q ss_pred CCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCchHHHHHH
Q 029836 19 NAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITKEHYEKGL 61 (187)
Q Consensus 19 ~~~~vLeiG~g-~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~ 61 (187)
++.+|+-+|+| .|..+..++..++ .+|+++|.++...+.++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G--a~V~v~D~~~~~~~~~~ 212 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLG--AIVRAFDTRPEVKEQVQ 212 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCGGGHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHH
Confidence 57899999986 3445555666664 68999999998776653
No 426
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=92.45 E-value=0.31 Score=35.87 Aligned_cols=87 Identities=15% Similarity=0.159 Sum_probs=51.9
Q ss_pred CEEEEEcccccHHHHHHHhhCCC-CC----EEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 21 KNTMEIGVFTGYSLLATALAIPD-DG----KILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~l~~~~~~-~~----~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
++|.-||+| ..+..++..+.. +. +|+..|.+++..+.+.+.+ +. +. ..+..+.+.
T Consensus 3 ~~i~iIG~G--~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~---g~----~~-~~~~~e~~~---------- 62 (247)
T 3gt0_A 3 KQIGFIGCG--NMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY---GL----TT-TTDNNEVAK---------- 62 (247)
T ss_dssp CCEEEECCS--HHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH---CC----EE-CSCHHHHHH----------
T ss_pred CeEEEECcc--HHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh---CC----EE-eCChHHHHH----------
Confidence 467788875 444444433311 22 7999999988776554432 32 22 223333322
Q ss_pred ceeEEEEcCCCcccHHHHHHHHhcccCCeEEE
Q 029836 96 TFDFVFVDADKDNYVNYHKRLIELVKVGGVIG 127 (187)
Q Consensus 96 ~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv 127 (187)
..|+||+--+.....+.++.+.+.+++|.+++
T Consensus 63 ~aDvVilav~~~~~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 63 NADILILSIKPDLYASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp HCSEEEECSCTTTHHHHC---CCSSCTTCEEE
T ss_pred hCCEEEEEeCHHHHHHHHHHHHhhcCCCCEEE
Confidence 46999987766777788888888888888766
No 427
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.36 E-value=0.88 Score=36.96 Aligned_cols=72 Identities=14% Similarity=0.104 Sum_probs=51.6
Q ss_pred CCEEEEEcccccHHHHHHHhhCCC-CCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchH--HHHHHhhcccCCCc
Q 029836 20 AKNTMEIGVFTGYSLLATALAIPD-DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDEKYHGT 96 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~~~~~~-~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~--~l~~~~~~~~~~~~ 96 (187)
.++|+-+|+ |..+..+++.+.. +..|+.+|.+++.++.+.+.+ .+..++||+.+ .|.+.. -+.
T Consensus 3 ~M~iiI~G~--G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~Ag-----i~~ 68 (461)
T 4g65_A 3 AMKIIILGA--GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEAG-----AQD 68 (461)
T ss_dssp CEEEEEECC--SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHHT-----TTT
T ss_pred cCEEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhcC-----CCc
Confidence 467888776 7788888888753 467999999999887665433 46788898865 455442 357
Q ss_pred eeEEEEcCC
Q 029836 97 FDFVFVDAD 105 (187)
Q Consensus 97 ~D~v~~d~~ 105 (187)
.|++++-..
T Consensus 69 ad~~ia~t~ 77 (461)
T 4g65_A 69 ADMLVAVTN 77 (461)
T ss_dssp CSEEEECCS
T ss_pred CCEEEEEcC
Confidence 898887543
No 428
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=92.28 E-value=1.8 Score=34.95 Aligned_cols=102 Identities=15% Similarity=0.171 Sum_probs=57.9
Q ss_pred HhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHH------------HHHcCCCCceEEEeCCchH
Q 029836 15 LKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPI------------IQKAGVAHKIDFREGPALP 82 (187)
Q Consensus 15 ~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~------------~~~~~~~~~i~~~~~d~~~ 82 (187)
.+..+-.+|--||+ |+++..++..+..+.+|+++|.+++.++...+. +... ..++++. .|..+
T Consensus 31 ~r~~~~mkIaVIGl--G~mG~~lA~~La~G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~--~~~l~~t-td~~e 105 (432)
T 3pid_A 31 GRGSEFMKITISGT--GYVGLSNGVLIAQNHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEK--PLNFRAT-TDKHD 105 (432)
T ss_dssp ----CCCEEEEECC--SHHHHHHHHHHHTTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHS--CCCEEEE-SCHHH
T ss_pred ccccCCCEEEEECc--CHHHHHHHHHHHcCCeEEEEecCHHHhhHHhccCCccccccHHHHHhhc--cCCeEEE-cCHHH
Confidence 33445567888877 555555555444357999999999988765541 1110 1133332 23322
Q ss_pred HHHHHhhcccCCCceeEEEEcCCCc-----------ccHHHHHHHHhcccCCeEEEEeCcC
Q 029836 83 LLDQLIQDEKYHGTFDFVFVDADKD-----------NYVNYHKRLIELVKVGGVIGYDNTL 132 (187)
Q Consensus 83 ~l~~~~~~~~~~~~~D~v~~d~~~~-----------~~~~~~~~~~~~L~~gG~lv~~~~~ 132 (187)
.+ ...|+||+--+.. ......+.+.+ |++|.++|.....
T Consensus 106 a~----------~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv 155 (432)
T 3pid_A 106 AY----------RNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTI 155 (432)
T ss_dssp HH----------TTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCC
T ss_pred HH----------hCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCC
Confidence 22 2468988765421 23556677778 9999888764443
No 429
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=92.25 E-value=0.092 Score=40.46 Aligned_cols=92 Identities=11% Similarity=0.055 Sum_probs=58.3
Q ss_pred EEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCch--HHHHHHhhcccCCCce
Q 029836 22 NTMEIGV--FTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPAL--PLLDQLIQDEKYHGTF 97 (187)
Q Consensus 22 ~vLeiG~--g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~--~~l~~~~~~~~~~~~~ 97 (187)
+||-+|+ +.|..+..+++.. +.++++++.+++..+.+++ .|. +. ++..+.. +.+..+ ..+.+
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~----lGa-~~--v~~~~~~~~~~~~~~-----~~~~~ 218 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKR--GYDVVASTGNREAADYLKQ----LGA-SE--VISREDVYDGTLKAL-----SKQQW 218 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHH--TCCEEEEESSSSTHHHHHH----HTC-SE--EEEHHHHCSSCCCSS-----CCCCE
T ss_pred eEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCC-cE--EEECCCchHHHHHHh-----hcCCc
Confidence 8999996 5677778888775 4679999999888777654 343 21 1211000 001111 02468
Q ss_pred eEEEEcCCCcccHHHHHHHHhcccCCeEEEEeCc
Q 029836 98 DFVFVDADKDNYVNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 98 D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
|+||-.... ..+..+.+.+++||.++.-..
T Consensus 219 d~vid~~g~----~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 219 QGAVDPVGG----KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp EEEEESCCT----HHHHHHHTTEEEEEEEEECCC
T ss_pred cEEEECCcH----HHHHHHHHhhcCCCEEEEEec
Confidence 988754322 357888899999999987543
No 430
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=92.21 E-value=0.98 Score=34.65 Aligned_cols=89 Identities=13% Similarity=0.017 Sum_probs=53.1
Q ss_pred CEEEEEcccccHHHHHHHhhCC-CC-CEEEEEeCCch---HHHHHHHHHHHcCCCCceEEEeC-CchHHHHHHhhcccCC
Q 029836 21 KNTMEIGVFTGYSLLATALAIP-DD-GKILALDITKE---HYEKGLPIIQKAGVAHKIDFREG-PALPLLDQLIQDEKYH 94 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~l~~~~~-~~-~~v~~vd~~~~---~~~~a~~~~~~~~~~~~i~~~~~-d~~~~l~~~~~~~~~~ 94 (187)
++|--||+ |..+..++..+. .+ .+|++.|.+++ ..+...+.+...|. .. +..+.+
T Consensus 25 m~IgvIG~--G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-------~~~s~~e~~---------- 85 (317)
T 4ezb_A 25 TTIAFIGF--GEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV-------EPLDDVAGI---------- 85 (317)
T ss_dssp CEEEEECC--SHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC-------EEESSGGGG----------
T ss_pred CeEEEECc--cHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC-------CCCCHHHHH----------
Confidence 57888887 555555554442 24 68999999873 22222233333332 22 332222
Q ss_pred CceeEEEEcCCCcccHHHHHHHHhcccCCeEEEE
Q 029836 95 GTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 95 ~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
...|+||+--+.......++.+.+.+++|.+++-
T Consensus 86 ~~aDvVi~avp~~~~~~~~~~i~~~l~~~~ivv~ 119 (317)
T 4ezb_A 86 ACADVVLSLVVGAATKAVAASAAPHLSDEAVFID 119 (317)
T ss_dssp GGCSEEEECCCGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred hcCCEEEEecCCHHHHHHHHHHHhhcCCCCEEEE
Confidence 2468998876655556666778888888887763
No 431
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=92.21 E-value=1.2 Score=36.16 Aligned_cols=97 Identities=12% Similarity=0.117 Sum_probs=56.7
Q ss_pred CEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCC------------CCceEEEeCCchHHHHHH
Q 029836 21 KNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGV------------AHKIDFREGPALPLLDQL 87 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~------------~~~i~~~~~d~~~~l~~~ 87 (187)
++|.-||+ |+++..++..+. .+.+|+++|.+++.++..++....... ..++++. .|..+.+
T Consensus 3 mkI~VIG~--G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t-~d~~ea~--- 76 (450)
T 3gg2_A 3 LDIAVVGI--GYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFG-TEIEQAV--- 76 (450)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEE-SCHHHHG---
T ss_pred CEEEEECc--CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEE-CCHHHHH---
Confidence 46778877 566555554442 146899999999887765541100000 1223332 2332221
Q ss_pred hhcccCCCceeEEEEcCCCc----------ccHHHHHHHHhcccCCeEEEEeC
Q 029836 88 IQDEKYHGTFDFVFVDADKD----------NYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 88 ~~~~~~~~~~D~v~~d~~~~----------~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
...|+||+--+.. .....++.+.+.|++|.+++...
T Consensus 77 -------~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S 122 (450)
T 3gg2_A 77 -------PEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS 122 (450)
T ss_dssp -------GGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred -------hcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee
Confidence 2468998865422 45667788888899888777543
No 432
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=92.20 E-value=1.1 Score=34.18 Aligned_cols=86 Identities=10% Similarity=0.106 Sum_probs=56.5
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH--HHHHhhcc-cCC
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDE-KYH 94 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--l~~~~~~~-~~~ 94 (187)
..+++|-.|++ |.++..+++.+. .+.+|++++.+++..+.+.+.+...+...++.++..|..+. +..+.+.. ...
T Consensus 7 ~~k~vlVTGas-~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTGGA-NGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEETTT-STHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 46789988865 445555555442 35799999999998888877777665444788888887542 22221111 013
Q ss_pred CceeEEEEcCC
Q 029836 95 GTFDFVFVDAD 105 (187)
Q Consensus 95 ~~~D~v~~d~~ 105 (187)
+.+|+++..+.
T Consensus 86 g~id~lv~nAg 96 (319)
T 3ioy_A 86 GPVSILCNNAG 96 (319)
T ss_dssp CCEEEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57899998754
No 433
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=92.17 E-value=1.5 Score=33.40 Aligned_cols=95 Identities=12% Similarity=-0.019 Sum_probs=58.5
Q ss_pred hhcCCCEEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccC
Q 029836 16 KLINAKNTMEIG--VFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKY 93 (187)
Q Consensus 16 ~~~~~~~vLeiG--~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~ 93 (187)
...+.++||-+| .+.|..+..+++.. +.+|++++ +++..+.+ ++.|.. .++..+..+.+...
T Consensus 149 ~~~~g~~vlV~Ga~G~vG~~a~q~a~~~--Ga~vi~~~-~~~~~~~~----~~lGa~---~~i~~~~~~~~~~~------ 212 (321)
T 3tqh_A 149 EVKQGDVVLIHAGAGGVGHLAIQLAKQK--GTTVITTA-SKRNHAFL----KALGAE---QCINYHEEDFLLAI------ 212 (321)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE-CHHHHHHH----HHHTCS---EEEETTTSCHHHHC------
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHc--CCEEEEEe-ccchHHHH----HHcCCC---EEEeCCCcchhhhh------
Confidence 345678999986 44677888888876 46899887 44444444 445552 12322222212221
Q ss_pred CCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 94 HGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 94 ~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
-..+|+||-... ...+..+.+.|+++|.++.-.
T Consensus 213 ~~g~D~v~d~~g----~~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 213 STPVDAVIDLVG----GDVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp CSCEEEEEESSC----HHHHHHHGGGEEEEEEEEECC
T ss_pred ccCCCEEEECCC----cHHHHHHHHhccCCCEEEEeC
Confidence 357999885332 233478889999999998643
No 434
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=92.15 E-value=1.7 Score=32.33 Aligned_cols=85 Identities=12% Similarity=0.107 Sum_probs=56.2
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH--HHHHhhcc-cC
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDE-KY 93 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--l~~~~~~~-~~ 93 (187)
.+.+.+|-.|.+.| ++..+++.+. .+++|+.+|.+++.++.+.+.+++.+ .++..+++|..+. ...+.+.. ..
T Consensus 7 L~gKvalVTGas~G-IG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (255)
T 4g81_D 7 LTGKTALVTGSARG-LGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTDELAIEAAFSKLDAE 83 (255)
T ss_dssp CTTCEEEETTCSSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 46788888886655 4455554442 36899999999999888888888766 3778888876431 22221111 12
Q ss_pred CCceeEEEEcCC
Q 029836 94 HGTFDFVFVDAD 105 (187)
Q Consensus 94 ~~~~D~v~~d~~ 105 (187)
.++.|+++..+.
T Consensus 84 ~G~iDiLVNNAG 95 (255)
T 4g81_D 84 GIHVDILINNAG 95 (255)
T ss_dssp TCCCCEEEECCC
T ss_pred CCCCcEEEECCC
Confidence 578999987753
No 435
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=92.14 E-value=1.5 Score=34.71 Aligned_cols=85 Identities=13% Similarity=0.087 Sum_probs=57.0
Q ss_pred hhcCCCEEEEEcccccHHHHHHHhhCC-CC-CEEEEEeCCchHHHHHHHHHHHcCC--CCceEEEeCCchHH--HHHHhh
Q 029836 16 KLINAKNTMEIGVFTGYSLLATALAIP-DD-GKILALDITKEHYEKGLPIIQKAGV--AHKIDFREGPALPL--LDQLIQ 89 (187)
Q Consensus 16 ~~~~~~~vLeiG~g~G~~~~~l~~~~~-~~-~~v~~vd~~~~~~~~a~~~~~~~~~--~~~i~~~~~d~~~~--l~~~~~ 89 (187)
...+.++||-.| |+|.++..+++.+. .+ .+|++++.++.......+.+..... ..+++++.+|..+. +..+..
T Consensus 31 ~~~~~k~vLVTG-atG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~ 109 (399)
T 3nzo_A 31 SVVSQSRFLVLG-GAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKA 109 (399)
T ss_dssp HHHHTCEEEEET-TTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHH
T ss_pred HHhCCCEEEEEc-CChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHH
Confidence 344678899988 56888888776653 23 5899999998877665555544321 25789999987653 232221
Q ss_pred cccCCCceeEEEEcCC
Q 029836 90 DEKYHGTFDFVFVDAD 105 (187)
Q Consensus 90 ~~~~~~~~D~v~~d~~ 105 (187)
...+|.||..+.
T Consensus 110 ----~~~~D~Vih~Aa 121 (399)
T 3nzo_A 110 ----DGQYDYVLNLSA 121 (399)
T ss_dssp ----CCCCSEEEECCC
T ss_pred ----hCCCCEEEECCC
Confidence 357899987654
No 436
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=91.85 E-value=1.6 Score=27.81 Aligned_cols=78 Identities=13% Similarity=0.011 Sum_probs=52.3
Q ss_pred CCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCC--CcccHHHHHHHHhccc
Q 029836 44 DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDAD--KDNYVNYHKRLIELVK 121 (187)
Q Consensus 44 ~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~--~~~~~~~~~~~~~~L~ 121 (187)
..++..+|-++......++.+...|. .+. ...+..+.+..+. ...+|+|++|.. ..+-.++++.+.+.-+
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~ 78 (130)
T 3eod_A 7 GKQILIVEDEQVFRSLLDSWFSSLGA--TTV-LAADGVDALELLG-----GFTPDLMICDIAMPRMNGLKLLEHIRNRGD 78 (130)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHTTC--EEE-EESCHHHHHHHHT-----TCCCSEEEECCC-----CHHHHHHHHHTTC
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhCCc--eEE-EeCCHHHHHHHHh-----cCCCCEEEEecCCCCCCHHHHHHHHHhcCC
Confidence 46899999999999999999988765 333 3556666666553 457999999975 2334566666665433
Q ss_pred CCeEEEEe
Q 029836 122 VGGVIGYD 129 (187)
Q Consensus 122 ~gG~lv~~ 129 (187)
.--++++.
T Consensus 79 ~~~ii~~t 86 (130)
T 3eod_A 79 QTPVLVIS 86 (130)
T ss_dssp CCCEEEEE
T ss_pred CCCEEEEE
Confidence 33455554
No 437
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=91.79 E-value=1.5 Score=28.67 Aligned_cols=79 Identities=13% Similarity=0.142 Sum_probs=52.1
Q ss_pred CCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCC--cccHHHHHHHHh--c
Q 029836 44 DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADK--DNYVNYHKRLIE--L 119 (187)
Q Consensus 44 ~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~--~~~~~~~~~~~~--~ 119 (187)
..+|..+|-++......+..+...|. ++. ...+..+.+..+. ...+|+|++|... ..-.++++.+.. .
T Consensus 8 ~~~iLivd~~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlii~d~~l~~~~g~~~~~~l~~~~~ 79 (147)
T 2zay_A 8 WWRIMLVDTQLPALAASISALSQEGF--DII-QCGNAIEAVPVAV-----KTHPHLIITEANMPKISGMDLFNSLKKNPQ 79 (147)
T ss_dssp CEEEEEECTTGGGGHHHHHHHHHHTE--EEE-EESSHHHHHHHHH-----HHCCSEEEEESCCSSSCHHHHHHHHHTSTT
T ss_pred CceEEEEeCCHHHHHHHHHHHHHcCC--eEE-EeCCHHHHHHHHH-----cCCCCEEEEcCCCCCCCHHHHHHHHHcCcc
Confidence 46899999999999999988888654 333 3455555555543 3469999999763 234566666665 3
Q ss_pred ccCCeEEEEeC
Q 029836 120 VKVGGVIGYDN 130 (187)
Q Consensus 120 L~~gG~lv~~~ 130 (187)
.+.--++++.+
T Consensus 80 ~~~~pii~ls~ 90 (147)
T 2zay_A 80 TASIPVIALSG 90 (147)
T ss_dssp TTTSCEEEEES
T ss_pred cCCCCEEEEeC
Confidence 33344666554
No 438
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=91.77 E-value=1.9 Score=28.49 Aligned_cols=79 Identities=14% Similarity=0.050 Sum_probs=52.4
Q ss_pred CCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCC--cccHHHHHHHHhccc
Q 029836 44 DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADK--DNYVNYHKRLIELVK 121 (187)
Q Consensus 44 ~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~--~~~~~~~~~~~~~L~ 121 (187)
..+|..+|-++......+..+...|. .+. ...+..+.+..+. ...+|+|++|... .+-.++++.+....+
T Consensus 14 ~~~ILivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~ 85 (153)
T 3hv2_A 14 RPEILLVDSQEVILQRLQQLLSPLPY--TLH-FARDATQALQLLA-----SREVDLVISAAHLPQMDGPTLLARIHQQYP 85 (153)
T ss_dssp CCEEEEECSCHHHHHHHHHHHTTSSC--EEE-EESSHHHHHHHHH-----HSCCSEEEEESCCSSSCHHHHHHHHHHHCT
T ss_pred CceEEEECCCHHHHHHHHHHhcccCc--EEE-EECCHHHHHHHHH-----cCCCCEEEEeCCCCcCcHHHHHHHHHhHCC
Confidence 36899999999999988888887653 333 3456666665553 3579999999762 334566676665433
Q ss_pred CCeEEEEeC
Q 029836 122 VGGVIGYDN 130 (187)
Q Consensus 122 ~gG~lv~~~ 130 (187)
.--++++.+
T Consensus 86 ~~~ii~~s~ 94 (153)
T 3hv2_A 86 STTRILLTG 94 (153)
T ss_dssp TSEEEEECC
T ss_pred CCeEEEEEC
Confidence 334555543
No 439
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=91.76 E-value=0.34 Score=37.74 Aligned_cols=101 Identities=11% Similarity=0.093 Sum_probs=53.6
Q ss_pred hcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEE-EEeCCchHHHHHHHHHHHcCCCCceEEEeCCch--HHHHHHhhcc
Q 029836 17 LINAKNTMEIGV--FTGYSLLATALAIPDDGKIL-ALDITKEHYEKGLPIIQKAGVAHKIDFREGPAL--PLLDQLIQDE 91 (187)
Q Consensus 17 ~~~~~~vLeiG~--g~G~~~~~l~~~~~~~~~v~-~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~--~~l~~~~~~~ 91 (187)
..+.++||-+|+ +.|..+..+++.. +++++ .++.++... ...+.+++.|. +. ++..+.. +.+.....
T Consensus 165 ~~~g~~VlV~Ga~G~vG~~aiqlak~~--Ga~vi~~~~~~~~~~-~~~~~~~~lGa-~~--vi~~~~~~~~~~~~~~~-- 236 (357)
T 1zsy_A 165 LQPGDSVIQNASNSGVGQAVIQIAAAL--GLRTINVVRDRPDIQ-KLSDRLKSLGA-EH--VITEEELRRPEMKNFFK-- 236 (357)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEECCCSCHH-HHHHHHHHTTC-SE--EEEHHHHHSGGGGGTTS--
T ss_pred cCCCCEEEEeCCcCHHHHHHHHHHHHc--CCEEEEEecCccchH-HHHHHHHhcCC-cE--EEecCcchHHHHHHHHh--
Confidence 345689999996 5777888888875 35554 445544321 11233445564 22 2221100 11111110
Q ss_pred cCCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEeC
Q 029836 92 KYHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYDN 130 (187)
Q Consensus 92 ~~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~~ 130 (187)
..+.+|+||-... ......+.+.|++||.++.-.
T Consensus 237 -~~~~~Dvvid~~g----~~~~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 237 -DMPQPRLALNCVG----GKSSTELLRQLARGGTMVTYG 270 (357)
T ss_dssp -SSCCCSEEEESSC----HHHHHHHHTTSCTTCEEEECC
T ss_pred -CCCCceEEEECCC----cHHHHHHHHhhCCCCEEEEEe
Confidence 0124898874322 122345789999999998643
No 440
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=91.76 E-value=1.8 Score=28.19 Aligned_cols=81 Identities=7% Similarity=0.059 Sum_probs=53.1
Q ss_pred CCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCC--cccHHHHHHHHh--c
Q 029836 44 DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADK--DNYVNYHKRLIE--L 119 (187)
Q Consensus 44 ~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~--~~~~~~~~~~~~--~ 119 (187)
..+|..+|-++......+..+...+.. .......+..+.+..+. ...+|+|++|... .+-.++++.+.. .
T Consensus 5 ~~~ILivdd~~~~~~~l~~~L~~~~~~-~~v~~~~~~~~a~~~l~-----~~~~dlii~D~~l~~~~g~~~~~~lr~~~~ 78 (144)
T 3kht_A 5 SKRVLVVEDNPDDIALIRRVLDRKDIH-CQLEFVDNGAKALYQVQ-----QAKYDLIILDIGLPIANGFEVMSAVRKPGA 78 (144)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHHTTCC-EEEEEESSHHHHHHHHT-----TCCCSEEEECTTCGGGCHHHHHHHHHSSST
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhcCCC-eeEEEECCHHHHHHHhh-----cCCCCEEEEeCCCCCCCHHHHHHHHHhccc
Confidence 368999999999999999999987752 12234456666666553 4679999999763 234556666655 2
Q ss_pred ccCCeEEEEeC
Q 029836 120 VKVGGVIGYDN 130 (187)
Q Consensus 120 L~~gG~lv~~~ 130 (187)
.+.--++++.+
T Consensus 79 ~~~~pii~~s~ 89 (144)
T 3kht_A 79 NQHTPIVILTD 89 (144)
T ss_dssp TTTCCEEEEET
T ss_pred ccCCCEEEEeC
Confidence 22334566554
No 441
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=91.66 E-value=1.8 Score=34.37 Aligned_cols=89 Identities=12% Similarity=0.106 Sum_probs=54.1
Q ss_pred EEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCC--------------CceEEEeCCchHHHHHH
Q 029836 22 NTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVA--------------HKIDFREGPALPLLDQL 87 (187)
Q Consensus 22 ~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~--------------~~i~~~~~d~~~~l~~~ 87 (187)
+|.-||+ |+.+..++..+..+.+|+++|.+++.++..++ .+.. .++++ ..+..+.+
T Consensus 2 kI~VIG~--G~vG~~~A~~La~G~~V~~~d~~~~~~~~l~~----~~~~i~e~~l~~~~~~~~~~l~~-t~~~~~~~--- 71 (402)
T 1dlj_A 2 KIAVAGS--GYVGLSLGVLLSLQNEVTIVDILPSKVDKINN----GLSPIQDEYIEYYLKSKQLSIKA-TLDSKAAY--- 71 (402)
T ss_dssp EEEEECC--SHHHHHHHHHHTTTSEEEEECSCHHHHHHHHT----TCCSSCCHHHHHHHHHSCCCEEE-ESCHHHHH---
T ss_pred EEEEECC--CHHHHHHHHHHhCCCEEEEEECCHHHHHHHHc----CCCCcCCCCHHHHHHhccCcEEE-eCCHHHHh---
Confidence 5667776 67777766655445789999999887665432 1210 12222 22322222
Q ss_pred hhcccCCCceeEEEEcCCCc-----------ccHHHHHHHHhcccCCeEEEE
Q 029836 88 IQDEKYHGTFDFVFVDADKD-----------NYVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 88 ~~~~~~~~~~D~v~~d~~~~-----------~~~~~~~~~~~~L~~gG~lv~ 128 (187)
...|+||+--+.. .....++.+.+ +++|.+++.
T Consensus 72 -------~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~ 115 (402)
T 1dlj_A 72 -------KEAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLII 115 (402)
T ss_dssp -------HHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEE
T ss_pred -------cCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEE
Confidence 2468998865432 25667777778 889888775
No 442
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=91.37 E-value=2.1 Score=28.18 Aligned_cols=79 Identities=8% Similarity=-0.015 Sum_probs=51.8
Q ss_pred CEEEEEeCCchHHHHHHHHHHHcCCCCceEE-EeCCchHHHHHHhhcccCCCceeEEEEcCC--CcccHHHHHHHHhccc
Q 029836 45 GKILALDITKEHYEKGLPIIQKAGVAHKIDF-REGPALPLLDQLIQDEKYHGTFDFVFVDAD--KDNYVNYHKRLIELVK 121 (187)
Q Consensus 45 ~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~-~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~--~~~~~~~~~~~~~~L~ 121 (187)
.+|..+|-++...+..+..+...+. ...+ ...+..+.+..+. ...+|+|++|.. ..+-.++++.+.+.-.
T Consensus 21 ~~iLivdd~~~~~~~l~~~L~~~~~--~~~v~~~~~~~~al~~l~-----~~~~dlii~D~~l~~~~g~~~~~~l~~~~~ 93 (150)
T 4e7p_A 21 MKVLVAEDQSMLRDAMCQLLTLQPD--VESVLQAKNGQEAIQLLE-----KESVDIAILDVEMPVKTGLEVLEWIRSEKL 93 (150)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTSTT--EEEEEEESSHHHHHHHHT-----TSCCSEEEECSSCSSSCHHHHHHHHHHTTC
T ss_pred cEEEEEcCCHHHHHHHHHHHHhCCC--cEEEEEECCHHHHHHHhh-----ccCCCEEEEeCCCCCCcHHHHHHHHHHhCC
Confidence 4799999999999888888886542 2333 3456666666553 467999999976 2344566777665433
Q ss_pred CCeEEEEeC
Q 029836 122 VGGVIGYDN 130 (187)
Q Consensus 122 ~gG~lv~~~ 130 (187)
.--++++.+
T Consensus 94 ~~~ii~ls~ 102 (150)
T 4e7p_A 94 ETKVVVVTT 102 (150)
T ss_dssp SCEEEEEES
T ss_pred CCeEEEEeC
Confidence 334555543
No 443
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=91.35 E-value=1.7 Score=33.03 Aligned_cols=85 Identities=13% Similarity=0.111 Sum_probs=49.6
Q ss_pred CCCEEEEEccc-ccHHHHH-HHhhCCCCCEEEEEeCCc------------------hHHHHHHHHHHHcCCCCceEEEeC
Q 029836 19 NAKNTMEIGVF-TGYSLLA-TALAIPDDGKILALDITK------------------EHYEKGLPIIQKAGVAHKIDFREG 78 (187)
Q Consensus 19 ~~~~vLeiG~g-~G~~~~~-l~~~~~~~~~v~~vd~~~------------------~~~~~a~~~~~~~~~~~~i~~~~~ 78 (187)
+..+|+-+|+| .|..... |+.. + -++++.+|.+. ...+.+++.+++.+-.-+++.+..
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~a-G-VG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~ 112 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRC-G-IGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNY 112 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHH-T-CSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHc-C-CCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecc
Confidence 45799999997 3443333 3333 2 47999999876 566778888887664445666554
Q ss_pred Cch--HHHHHHhh----cc-cCCCceeEEEEcCC
Q 029836 79 PAL--PLLDQLIQ----DE-KYHGTFDFVFVDAD 105 (187)
Q Consensus 79 d~~--~~l~~~~~----~~-~~~~~~D~v~~d~~ 105 (187)
+.. +.+..+.. .. .....||+|+-..+
T Consensus 113 ~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D 146 (292)
T 3h8v_A 113 NITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD 146 (292)
T ss_dssp CTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred cCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence 442 22232210 00 00147999985443
No 444
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=91.32 E-value=1.8 Score=27.41 Aligned_cols=78 Identities=17% Similarity=0.191 Sum_probs=52.1
Q ss_pred CEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCC--CcccHHHHHHHHhc--c
Q 029836 45 GKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDAD--KDNYVNYHKRLIEL--V 120 (187)
Q Consensus 45 ~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~--~~~~~~~~~~~~~~--L 120 (187)
.+|..+|-++...+..++.++..|. .+. ...+..+.+..+. ...+|+|++|.. ..+-.++++.+... .
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~ 75 (127)
T 3i42_A 4 QQALIVEDYQAAAETFKELLEMLGF--QAD-YVMSGTDALHAMS-----TRGYDAVFIDLNLPDTSGLALVKQLRALPME 75 (127)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHTTE--EEE-EESSHHHHHHHHH-----HSCCSEEEEESBCSSSBHHHHHHHHHHSCCS
T ss_pred ceEEEEcCCHHHHHHHHHHHHHcCC--CEE-EECCHHHHHHHHH-----hcCCCEEEEeCCCCCCCHHHHHHHHHhhhcc
Confidence 5789999999999999999988764 333 3345655655553 357999999975 23445667777654 3
Q ss_pred cCCeEEEEeC
Q 029836 121 KVGGVIGYDN 130 (187)
Q Consensus 121 ~~gG~lv~~~ 130 (187)
+.--++++.+
T Consensus 76 ~~~~ii~~s~ 85 (127)
T 3i42_A 76 KTSKFVAVSG 85 (127)
T ss_dssp SCCEEEEEEC
T ss_pred CCCCEEEEEC
Confidence 3334555543
No 445
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=91.26 E-value=1.5 Score=32.11 Aligned_cols=85 Identities=15% Similarity=0.113 Sum_probs=55.7
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH--HHHHhhcccCC
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDEKYH 94 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--l~~~~~~~~~~ 94 (187)
.+.+++|-.|++. .++..+++.+. .+.+|+.++.+++..+.+.+.++..+ .++.++.+|..+. +..+.+.....
T Consensus 5 ~~~k~vlVTGas~-GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 5 PRNATVAVIGAGD-YIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAADAH 81 (252)
T ss_dssp CCSCEEEEECCSS-HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHHhh
Confidence 3567888888654 45555554442 25799999999998888888887764 4788898887542 22222111001
Q ss_pred CceeEEEEcCC
Q 029836 95 GTFDFVFVDAD 105 (187)
Q Consensus 95 ~~~D~v~~d~~ 105 (187)
+.+|+++..+.
T Consensus 82 g~id~lv~nAg 92 (252)
T 3h7a_A 82 APLEVTIFNVG 92 (252)
T ss_dssp SCEEEEEECCC
T ss_pred CCceEEEECCC
Confidence 57899987654
No 446
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.12 E-value=0.64 Score=33.59 Aligned_cols=73 Identities=11% Similarity=0.031 Sum_probs=48.1
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCce-EEEeCCchHHHHHHhhcccCCC
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKI-DFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i-~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
.+.++||-+| ++|.++..+++.+. .+.+|++++.++...+.... .++ +++.+|..+.+... -+
T Consensus 19 l~~~~ilVtG-atG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~~~~~~~------~~ 83 (236)
T 3e8x_A 19 FQGMRVLVVG-ANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLEEDFSHA------FA 83 (236)
T ss_dssp --CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTTSCCGGG------GT
T ss_pred cCCCeEEEEC-CCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccHHHHHHH------Hc
Confidence 4578899888 56777777666552 35799999999876544322 367 88888886322222 34
Q ss_pred ceeEEEEcCC
Q 029836 96 TFDFVFVDAD 105 (187)
Q Consensus 96 ~~D~v~~d~~ 105 (187)
..|.|+....
T Consensus 84 ~~D~vi~~ag 93 (236)
T 3e8x_A 84 SIDAVVFAAG 93 (236)
T ss_dssp TCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7899997654
No 447
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=91.11 E-value=1.4 Score=32.62 Aligned_cols=83 Identities=11% Similarity=0.029 Sum_probs=54.9
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchH--HHHHHhhcccCCC
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDEKYHG 95 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~--~l~~~~~~~~~~~ 95 (187)
+.+++|-.|++ |.++..+++.+. .+.+|+.++.+++..+...+.+...+...++.++.+|..+ .+..+.+. .+
T Consensus 9 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~g 84 (267)
T 3t4x_A 9 KGKTALVTGST-AGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK---YP 84 (267)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH---CC
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh---cC
Confidence 46788888854 555555555442 2579999999998887777777665444567788887654 23333322 45
Q ss_pred ceeEEEEcCC
Q 029836 96 TFDFVFVDAD 105 (187)
Q Consensus 96 ~~D~v~~d~~ 105 (187)
..|+++..+.
T Consensus 85 ~id~lv~nAg 94 (267)
T 3t4x_A 85 KVDILINNLG 94 (267)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7899987653
No 448
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=91.11 E-value=1.5 Score=34.43 Aligned_cols=91 Identities=9% Similarity=0.046 Sum_probs=56.8
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
+.++|.-||+ |..+..++..+. .+.+|++.|.+++..+.+.+ .+. . ...+..+.+.. ....
T Consensus 21 ~~mkIgiIGl--G~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~----~g~----~-~~~s~~e~~~~-------a~~~ 82 (358)
T 4e21_A 21 QSMQIGMIGL--GRMGADMVRRLRKGGHECVVYDLNVNAVQALER----EGI----A-GARSIEEFCAK-------LVKP 82 (358)
T ss_dssp -CCEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT----TTC----B-CCSSHHHHHHH-------SCSS
T ss_pred cCCEEEEECc--hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH----CCC----E-EeCCHHHHHhc-------CCCC
Confidence 4568888987 555555544332 24789999999887654432 232 1 12334334332 2356
Q ss_pred eEEEEcCCCcccHHHHHHHHhcccCCeEEE
Q 029836 98 DFVFVDADKDNYVNYHKRLIELVKVGGVIG 127 (187)
Q Consensus 98 D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv 127 (187)
|+|++--+.......++.+.+.|++|.+++
T Consensus 83 DvVi~~vp~~~v~~vl~~l~~~l~~g~iiI 112 (358)
T 4e21_A 83 RVVWLMVPAAVVDSMLQRMTPLLAANDIVI 112 (358)
T ss_dssp CEEEECSCGGGHHHHHHHHGGGCCTTCEEE
T ss_pred CEEEEeCCHHHHHHHHHHHHhhCCCCCEEE
Confidence 999987654466777888888898887776
No 449
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=91.05 E-value=2.3 Score=28.07 Aligned_cols=79 Identities=11% Similarity=0.055 Sum_probs=52.5
Q ss_pred CCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCC--cccHHHHHHHHhccc
Q 029836 44 DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADK--DNYVNYHKRLIELVK 121 (187)
Q Consensus 44 ~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~--~~~~~~~~~~~~~L~ 121 (187)
..+|..+|-++......+..+...|. ++. ...+..+.+..+. ...+|+|++|... .+-.++++.+...-+
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~ 78 (154)
T 2rjn_A 7 NYTVMLVDDEQPILNSLKRLIKRLGC--NII-TFTSPLDALEALK-----GTSVQLVISDMRMPEMGGEVFLEQVAKSYP 78 (154)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTTTC--EEE-EESCHHHHHHHHT-----TSCCSEEEEESSCSSSCHHHHHHHHHHHCT
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHcCC--eEE-EeCCHHHHHHHHh-----cCCCCEEEEecCCCCCCHHHHHHHHHHhCC
Confidence 46899999999999999988887654 333 4456656665553 4579999999763 234556666655433
Q ss_pred CCeEEEEeC
Q 029836 122 VGGVIGYDN 130 (187)
Q Consensus 122 ~gG~lv~~~ 130 (187)
.--++++.+
T Consensus 79 ~~~ii~ls~ 87 (154)
T 2rjn_A 79 DIERVVISG 87 (154)
T ss_dssp TSEEEEEEC
T ss_pred CCcEEEEec
Confidence 334555544
No 450
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=90.97 E-value=0.87 Score=34.01 Aligned_cols=89 Identities=18% Similarity=0.229 Sum_probs=53.1
Q ss_pred CEEEEEcccccHHHHHHHhhCCC-CC--EEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC-c
Q 029836 21 KNTMEIGVFTGYSLLATALAIPD-DG--KILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG-T 96 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~l~~~~~~-~~--~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~-~ 96 (187)
++|.-||+| .++..++..+.. +. +|+++|.+++..+.++ +.|... .. ..+..+. -. .
T Consensus 2 ~~I~iIG~G--~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~----~~g~~~--~~-~~~~~~~----------~~~~ 62 (281)
T 2g5c_A 2 QNVLIVGVG--FMGGSFAKSLRRSGFKGKIYGYDINPESISKAV----DLGIID--EG-TTSIAKV----------EDFS 62 (281)
T ss_dssp CEEEEESCS--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH----HTTSCS--EE-ESCGGGG----------GGTC
T ss_pred cEEEEEecC--HHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH----HCCCcc--cc-cCCHHHH----------hcCC
Confidence 367788874 444444433321 23 8999999988766543 334321 11 1232221 13 5
Q ss_pred eeEEEEcCCCcccHHHHHHHHhcccCCeEEEE
Q 029836 97 FDFVFVDADKDNYVNYHKRLIELVKVGGVIGY 128 (187)
Q Consensus 97 ~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~ 128 (187)
.|+|++-.+.......++.+.+.++++.+++.
T Consensus 63 aDvVilavp~~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 63 PDFVMLSSPVRTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCEEEEcCCHHHHHHHHHHHHhhCCCCcEEEE
Confidence 79999877655666777777788888886653
No 451
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=90.86 E-value=3 Score=30.69 Aligned_cols=84 Identities=17% Similarity=0.104 Sum_probs=54.8
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH--HHHHhhcc-cC
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDE-KY 93 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--l~~~~~~~-~~ 93 (187)
.+.+++|-.|++.| ++..+++.+. .+.+|+.++.+++..+.+.+.+...+ .++.++.+|..+. +..+.+.. ..
T Consensus 9 l~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 9 LTDKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETMKA 85 (264)
T ss_dssp TTTCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46788999987554 4444444332 25799999999988888777777654 4788888887542 22221111 01
Q ss_pred CCceeEEEEcC
Q 029836 94 HGTFDFVFVDA 104 (187)
Q Consensus 94 ~~~~D~v~~d~ 104 (187)
.+..|+++..+
T Consensus 86 ~g~id~lv~nA 96 (264)
T 3ucx_A 86 YGRVDVVINNA 96 (264)
T ss_dssp TSCCSEEEECC
T ss_pred cCCCcEEEECC
Confidence 46789998765
No 452
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=90.84 E-value=2.4 Score=27.93 Aligned_cols=80 Identities=13% Similarity=0.078 Sum_probs=51.2
Q ss_pred CCEEEEEeCCchHHHHHHHHHHH-cCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCC--cccHHHHHHHHhcc
Q 029836 44 DGKILALDITKEHYEKGLPIIQK-AGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADK--DNYVNYHKRLIELV 120 (187)
Q Consensus 44 ~~~v~~vd~~~~~~~~a~~~~~~-~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~--~~~~~~~~~~~~~L 120 (187)
..+|..+|-++......+..+.. .+. .+.....+..+.+..+. ...+|+|++|... .+-.++++.+...-
T Consensus 5 ~~~ILivdd~~~~~~~l~~~L~~~~~~--~v~~~~~~~~~a~~~l~-----~~~~dlii~D~~l~~~~g~~~~~~l~~~~ 77 (153)
T 3cz5_A 5 TARIMLVDDHPIVREGYRRLIERRPGY--AVVAEAADAGEAYRLYR-----ETTPDIVVMDLTLPGPGGIEATRHIRQWD 77 (153)
T ss_dssp CEEEEEECSCHHHHHHHHHHHTTSTTE--EEEEEESSHHHHHHHHH-----TTCCSEEEECSCCSSSCHHHHHHHHHHHC
T ss_pred ccEEEEECCcHHHHHHHHHHHhhCCCc--EEEEEeCCHHHHHHHHh-----cCCCCEEEEecCCCCCCHHHHHHHHHHhC
Confidence 35789999999988888888865 332 22224566666665553 4579999999763 23456666666553
Q ss_pred cCCeEEEEeC
Q 029836 121 KVGGVIGYDN 130 (187)
Q Consensus 121 ~~gG~lv~~~ 130 (187)
..--++++.+
T Consensus 78 ~~~~ii~ls~ 87 (153)
T 3cz5_A 78 GAARILIFTM 87 (153)
T ss_dssp TTCCEEEEES
T ss_pred CCCeEEEEEC
Confidence 3334666543
No 453
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=90.68 E-value=1.9 Score=31.55 Aligned_cols=86 Identities=14% Similarity=0.025 Sum_probs=52.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCc--hH--HHHHHhhcc-
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA--LP--LLDQLIQDE- 91 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~--~~--~l~~~~~~~- 91 (187)
.+.+++|-.|++ |.++..+++.+. .+.+|+.++.+++..+.+.+.+...+. .++.++..|. .+ ....+.+..
T Consensus 10 l~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (252)
T 3f1l_A 10 LNDRIILVTGAS-DGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETG-RQPQWFILDLLTCTSENCQQLAQRIA 87 (252)
T ss_dssp TTTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-CCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CCceEEEEecccCCHHHHHHHHHHHH
Confidence 356788888855 455555555442 257999999999888777766665432 3667777776 21 222221110
Q ss_pred cCCCceeEEEEcCC
Q 029836 92 KYHGTFDFVFVDAD 105 (187)
Q Consensus 92 ~~~~~~D~v~~d~~ 105 (187)
...+..|+++..+.
T Consensus 88 ~~~g~id~lv~nAg 101 (252)
T 3f1l_A 88 VNYPRLDGVLHNAG 101 (252)
T ss_dssp HHCSCCSEEEECCC
T ss_pred HhCCCCCEEEECCc
Confidence 01467899987643
No 454
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=90.62 E-value=1.5 Score=28.36 Aligned_cols=79 Identities=14% Similarity=0.042 Sum_probs=50.5
Q ss_pred CCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCCc----ccHHHHHHHHhc
Q 029836 44 DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKD----NYVNYHKRLIEL 119 (187)
Q Consensus 44 ~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~~----~~~~~~~~~~~~ 119 (187)
..+|..+|-++......+..++..|. ++. ...+..+.+..+. ...+|+|++|.... +-.++++.+...
T Consensus 6 ~~~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlvi~D~~l~~~~~~g~~~~~~l~~~ 77 (136)
T 3kto_A 6 HPIIYLVDHQKDARAALSKLLSPLDV--TIQ-CFASAESFMRQQI-----SDDAIGMIIEAHLEDKKDSGIELLETLVKR 77 (136)
T ss_dssp -CEEEEECSCHHHHHHHHHHHTTSSS--EEE-EESSHHHHTTSCC-----CTTEEEEEEETTGGGBTTHHHHHHHHHHHT
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHCCc--EEE-EeCCHHHHHHHHh-----ccCCCEEEEeCcCCCCCccHHHHHHHHHhC
Confidence 35899999999999988888887654 333 3445555554442 45799999998633 334566666554
Q ss_pred ccCCeEEEEeC
Q 029836 120 VKVGGVIGYDN 130 (187)
Q Consensus 120 L~~gG~lv~~~ 130 (187)
-+.--++++..
T Consensus 78 ~~~~~ii~~s~ 88 (136)
T 3kto_A 78 GFHLPTIVMAS 88 (136)
T ss_dssp TCCCCEEEEES
T ss_pred CCCCCEEEEEc
Confidence 33334555543
No 455
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=90.62 E-value=3 Score=28.67 Aligned_cols=79 Identities=14% Similarity=0.124 Sum_probs=53.6
Q ss_pred CCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCC--CcccHHHHHHHHhccc
Q 029836 44 DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDAD--KDNYVNYHKRLIELVK 121 (187)
Q Consensus 44 ~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~--~~~~~~~~~~~~~~L~ 121 (187)
..+|..+|-++......+..+...|. .+ ....+..+.+..+. ...+|+|++|.. ..+-.++++.+...-.
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~g~--~v-~~~~~~~~al~~~~-----~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~ 78 (184)
T 3rqi_A 7 DKNFLVIDDNEVFAGTLARGLERRGY--AV-RQAHNKDEALKLAG-----AEKFEFITVXLHLGNDSGLSLIAPLCDLQP 78 (184)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTC--EE-EEECSHHHHHHHHT-----TSCCSEEEECSEETTEESHHHHHHHHHHCT
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHCCC--EE-EEeCCHHHHHHHHh-----hCCCCEEEEeccCCCccHHHHHHHHHhcCC
Confidence 36899999999999999999988764 34 34556666666653 467999999975 2234566666665433
Q ss_pred CCeEEEEeC
Q 029836 122 VGGVIGYDN 130 (187)
Q Consensus 122 ~gG~lv~~~ 130 (187)
.--++++..
T Consensus 79 ~~~ii~lt~ 87 (184)
T 3rqi_A 79 DARILVLTG 87 (184)
T ss_dssp TCEEEEEES
T ss_pred CCCEEEEeC
Confidence 334555543
No 456
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=90.52 E-value=1.9 Score=31.32 Aligned_cols=84 Identities=13% Similarity=0.091 Sum_probs=54.7
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH--HHHHhhcc-cCC
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDE-KYH 94 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--l~~~~~~~-~~~ 94 (187)
+.+++|-.|+ +|.++..+++.+. .+.+|+.++.+++..+...+.++..+ .++.++.+|..+. +..+.+.. ...
T Consensus 4 ~~k~vlITGa-s~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 4 NEKVALVTGA-SRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp TTCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4678888885 4555555555442 25799999999988888777777665 4788888887542 22221111 014
Q ss_pred CceeEEEEcCC
Q 029836 95 GTFDFVFVDAD 105 (187)
Q Consensus 95 ~~~D~v~~d~~ 105 (187)
+.+|+++..+.
T Consensus 81 ~~id~li~~Ag 91 (247)
T 3lyl_A 81 LAIDILVNNAG 91 (247)
T ss_dssp CCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57899987653
No 457
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=90.51 E-value=4.4 Score=30.48 Aligned_cols=82 Identities=11% Similarity=0.050 Sum_probs=53.6
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH------HHHHhhcc
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL------LDQLIQDE 91 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~------l~~~~~~~ 91 (187)
+.+++|-.|+ +|.++..+++.+. .+.+|+.++.+++..+.+.+.++..+. .++.++.+|..+. +....+.
T Consensus 40 ~~k~vlVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~- 116 (293)
T 3rih_A 40 SARSVLVTGG-TKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGA-GNVIGVRLDVSDPGSCADAARTVVDA- 116 (293)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSS-SCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCC-CcEEEEEEeCCCHHHHHHHHHHHHHH-
Confidence 4567887775 4555565555442 257999999999888877777765542 4788888887542 2222211
Q ss_pred cCCCceeEEEEcCC
Q 029836 92 KYHGTFDFVFVDAD 105 (187)
Q Consensus 92 ~~~~~~D~v~~d~~ 105 (187)
.+.+|+++..+.
T Consensus 117 --~g~iD~lvnnAg 128 (293)
T 3rih_A 117 --FGALDVVCANAG 128 (293)
T ss_dssp --HSCCCEEEECCC
T ss_pred --cCCCCEEEECCC
Confidence 357899987653
No 458
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=90.41 E-value=1.8 Score=31.32 Aligned_cols=83 Identities=16% Similarity=0.099 Sum_probs=53.0
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCc--h--H----HHHHHh
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPA--L--P----LLDQLI 88 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~--~--~----~l~~~~ 88 (187)
.+.+++|-.|++ |.++..+++.+. .+.+|+.++.+++..+.+.+.++..+. .+..++..|. . + ....+.
T Consensus 12 l~~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~d~d~~~~~~~~~~~~~~~ 89 (247)
T 3i1j_A 12 LKGRVILVTGAA-RGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQ-PQPLIIALNLENATAQQYRELAARVE 89 (247)
T ss_dssp TTTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTS-CCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCC-CCceEEEeccccCCHHHHHHHHHHHH
Confidence 356788888854 555666555442 257999999999988888888877654 4566666554 1 1 122222
Q ss_pred hcccCCCceeEEEEcCC
Q 029836 89 QDEKYHGTFDFVFVDAD 105 (187)
Q Consensus 89 ~~~~~~~~~D~v~~d~~ 105 (187)
+. .+.+|+++..+.
T Consensus 90 ~~---~g~id~lv~nAg 103 (247)
T 3i1j_A 90 HE---FGRLDGLLHNAS 103 (247)
T ss_dssp HH---HSCCSEEEECCC
T ss_pred Hh---CCCCCEEEECCc
Confidence 11 257899987653
No 459
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=90.36 E-value=4.5 Score=30.31 Aligned_cols=108 Identities=17% Similarity=0.184 Sum_probs=62.6
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchH-HHHHHHHHHHcCCCCceEEEeCCchHH--HHHHhhcc-cC
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEH-YEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDE-KY 93 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~-~~~a~~~~~~~~~~~~i~~~~~d~~~~--l~~~~~~~-~~ 93 (187)
+.+++|-.|++ |.++..+++.+. .+.+|+.++.+++. .+.+.+.++..+ .++.++.+|..+. +..+.+.. ..
T Consensus 46 ~gk~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 46 KGKNVLITGGD-SGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG--VKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT--CCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45788888854 455555555442 25789999988753 444445455444 4788888887542 22221110 00
Q ss_pred CCceeEEEEcCC---C-c-----c---c-----------HHHHHHHHhcccCCeEEEEe
Q 029836 94 HGTFDFVFVDAD---K-D-----N---Y-----------VNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 94 ~~~~D~v~~d~~---~-~-----~---~-----------~~~~~~~~~~L~~gG~lv~~ 129 (187)
.+..|+++..+. . . . + ....+.+.+.++++|.+|.-
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i 181 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT 181 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence 357899987643 1 1 0 1 12344556778888877754
No 460
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=90.29 E-value=2.3 Score=34.65 Aligned_cols=99 Identities=14% Similarity=0.058 Sum_probs=56.2
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHc---CC---------CCceEEEeCCchHHH
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKA---GV---------AHKIDFREGPALPLL 84 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~---~~---------~~~i~~~~~d~~~~l 84 (187)
....+|.-||+| +++..++..+. .+.+|+++|.+++.++..++..... ++ ..++++ ..|..+.+
T Consensus 6 ~~~~~I~VIG~G--~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~-ttd~~~a~ 82 (478)
T 2y0c_A 6 HGSMNLTIIGSG--SVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF-STDIEAAV 82 (478)
T ss_dssp -CCCEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ECCHHHHH
T ss_pred CCCceEEEECcC--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE-ECCHHHHh
Confidence 456789999885 33333333222 1468999999998877655421000 00 012322 22322222
Q ss_pred HHHhhcccCCCceeEEEEcCCC----------cccHHHHHHHHhcccCCeEEEEe
Q 029836 85 DQLIQDEKYHGTFDFVFVDADK----------DNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 85 ~~~~~~~~~~~~~D~v~~d~~~----------~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
...|+||+--+. ......++.+.+.|++|.+++..
T Consensus 83 ----------~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~ 127 (478)
T 2y0c_A 83 ----------AHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDK 127 (478)
T ss_dssp ----------HHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred ----------hcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 246899886542 34566777788889998877643
No 461
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=90.26 E-value=2.3 Score=31.76 Aligned_cols=89 Identities=17% Similarity=0.183 Sum_probs=53.1
Q ss_pred CCEEEEEcccccHHHHHHHhhC---CCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCc
Q 029836 20 AKNTMEIGVFTGYSLLATALAI---PDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGT 96 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~~~~---~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~ 96 (187)
.++|.-||+|. .+..++..+ +.+.+|+++|.+++..+.+++ .|... . ...+..+.+ ..
T Consensus 6 ~~~I~iIG~G~--mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g~~~--~-~~~~~~~~~----------~~ 66 (290)
T 3b1f_A 6 EKTIYIAGLGL--IGASLALGIKRDHPHYKIVGYNRSDRSRDIALE----RGIVD--E-ATADFKVFA----------AL 66 (290)
T ss_dssp CCEEEEECCSH--HHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH----TTSCS--E-EESCTTTTG----------GG
T ss_pred cceEEEEeeCH--HHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH----cCCcc--c-ccCCHHHhh----------cC
Confidence 45788898753 333333322 114689999999877665433 33311 1 122322221 25
Q ss_pred eeEEEEcCCCcccHHHHHHHHhc-ccCCeEEE
Q 029836 97 FDFVFVDADKDNYVNYHKRLIEL-VKVGGVIG 127 (187)
Q Consensus 97 ~D~v~~d~~~~~~~~~~~~~~~~-L~~gG~lv 127 (187)
.|+|++-.+.......++.+.+. ++++.+++
T Consensus 67 aDvVilavp~~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 67 ADVIILAVPIKKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp CSEEEECSCHHHHHHHHHHHHTSCCCTTCEEE
T ss_pred CCEEEEcCCHHHHHHHHHHHHhcCCCCCCEEE
Confidence 69999877655567777777777 88877665
No 462
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=90.22 E-value=1.2 Score=33.30 Aligned_cols=86 Identities=7% Similarity=0.019 Sum_probs=54.7
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH---HHHHhhcc-c
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL---LDQLIQDE-K 92 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~---l~~~~~~~-~ 92 (187)
.+.+++|-.|++ |.++..+++.+. .+.+|+.++.+++..+.+.+.+...+. .++.++.+|..+. +..+.+.. .
T Consensus 10 ~~~k~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~~v~~~~~~~~~ 87 (311)
T 3o26_A 10 TKRRCAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNH-ENVVFHQLDVTDPIATMSSLADFIKT 87 (311)
T ss_dssp --CCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC-CSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEccCCCcHHHHHHHHHHHHH
Confidence 356788888855 555666555442 357999999999888777777766543 5788888887543 22221110 0
Q ss_pred CCCceeEEEEcCC
Q 029836 93 YHGTFDFVFVDAD 105 (187)
Q Consensus 93 ~~~~~D~v~~d~~ 105 (187)
..+.+|+++..+.
T Consensus 88 ~~g~iD~lv~nAg 100 (311)
T 3o26_A 88 HFGKLDILVNNAG 100 (311)
T ss_dssp HHSSCCEEEECCC
T ss_pred hCCCCCEEEECCc
Confidence 0257999998764
No 463
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=90.22 E-value=1.5 Score=32.94 Aligned_cols=87 Identities=17% Similarity=0.099 Sum_probs=55.2
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC----CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchH--HHHHHhhcc
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIP----DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDE 91 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~----~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~--~l~~~~~~~ 91 (187)
.+.+++|-.|++ |.++..+++.+. ...+|+.++.+++.++.+.+.+.......++.++.+|..+ .+..+.+..
T Consensus 31 l~~k~~lVTGas-~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 109 (287)
T 3rku_A 31 LAKKTVLITGAS-AGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL 109 (287)
T ss_dssp HTTCEEEEESTT-SHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred cCCCEEEEecCC-ChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 467889999865 445555554442 1239999999998888777777664333578888888754 233332221
Q ss_pred -cCCCceeEEEEcCC
Q 029836 92 -KYHGTFDFVFVDAD 105 (187)
Q Consensus 92 -~~~~~~D~v~~d~~ 105 (187)
...+..|+++..+.
T Consensus 110 ~~~~g~iD~lVnnAG 124 (287)
T 3rku_A 110 PQEFKDIDILVNNAG 124 (287)
T ss_dssp CGGGCSCCEEEECCC
T ss_pred HHhcCCCCEEEECCC
Confidence 01357899987653
No 464
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=90.17 E-value=2.5 Score=27.14 Aligned_cols=79 Identities=11% Similarity=-0.145 Sum_probs=53.1
Q ss_pred CCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCC---cccHHHHHHHHhcc
Q 029836 44 DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADK---DNYVNYHKRLIELV 120 (187)
Q Consensus 44 ~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~---~~~~~~~~~~~~~L 120 (187)
..+|..+|-++......+..++..|. .+.....+..+.+..+. ...+|+|++|... ..-.++++.+...
T Consensus 9 ~~~iLivdd~~~~~~~l~~~L~~~g~--~v~~~~~~~~~a~~~~~-----~~~~dlii~d~~~~~~~~g~~~~~~l~~~- 80 (140)
T 3cg0_A 9 LPGVLIVEDGRLAAATLRIQLESLGY--DVLGVFDNGEEAVRCAP-----DLRPDIALVDIMLCGALDGVETAARLAAG- 80 (140)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHH-----HHCCSEEEEESSCCSSSCHHHHHHHHHHH-
T ss_pred CceEEEEECCHHHHHHHHHHHHHCCC--eeEEEECCHHHHHHHHH-----hCCCCEEEEecCCCCCCCHHHHHHHHHhC-
Confidence 46899999999999999998988654 34333566666655553 3469999999753 2345667776665
Q ss_pred cCCeEEEEeC
Q 029836 121 KVGGVIGYDN 130 (187)
Q Consensus 121 ~~gG~lv~~~ 130 (187)
..--++++.+
T Consensus 81 ~~~~ii~ls~ 90 (140)
T 3cg0_A 81 CNLPIIFITS 90 (140)
T ss_dssp SCCCEEEEEC
T ss_pred CCCCEEEEec
Confidence 3344555543
No 465
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=90.13 E-value=2.1 Score=28.43 Aligned_cols=68 Identities=22% Similarity=0.237 Sum_probs=48.7
Q ss_pred CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCCcc--cHHHHHHHH
Q 029836 43 DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKDN--YVNYHKRLI 117 (187)
Q Consensus 43 ~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~~~--~~~~~~~~~ 117 (187)
++-+|..||-++......+..++..|.. ......+..+.+..+. ...||+|++|..... =.++++.++
T Consensus 11 k~~rILiVDD~~~~r~~l~~~L~~~G~~--~v~~a~~g~~al~~~~-----~~~~DlillD~~MP~mdG~el~~~ir 80 (134)
T 3to5_A 11 KNMKILIVDDFSTMRRIVKNLLRDLGFN--NTQEADDGLTALPMLK-----KGDFDFVVTDWNMPGMQGIDLLKNIR 80 (134)
T ss_dssp TTCCEEEECSCHHHHHHHHHHHHHTTCC--CEEEESSHHHHHHHHH-----HHCCSEEEEESCCSSSCHHHHHHHHH
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHHcCCc--EEEEECCHHHHHHHHH-----hCCCCEEEEcCCCCCCCHHHHHHHHH
Confidence 3568999999999999999999998762 2234567766666554 357999999986333 345566655
No 466
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=90.13 E-value=1.4 Score=33.73 Aligned_cols=81 Identities=17% Similarity=0.156 Sum_probs=51.7
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCC---CceEEEeCCchHH--HHHHhhcc
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVA---HKIDFREGPALPL--LDQLIQDE 91 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~---~~i~~~~~d~~~~--l~~~~~~~ 91 (187)
...++||-+| |+|.++..+++.+- .+.+|++++.++.........+...... .+++++.+|..+. +..+
T Consensus 23 ~~~~~vlVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~---- 97 (351)
T 3ruf_A 23 FSPKTWLITG-VAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQV---- 97 (351)
T ss_dssp HSCCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHH----
T ss_pred CCCCeEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHH----
Confidence 3578999888 67888888776652 3579999998655333222333322110 4789999988653 3333
Q ss_pred cCCCceeEEEEcCC
Q 029836 92 KYHGTFDFVFVDAD 105 (187)
Q Consensus 92 ~~~~~~D~v~~d~~ 105 (187)
-..+|.||.-+.
T Consensus 98 --~~~~d~Vih~A~ 109 (351)
T 3ruf_A 98 --MKGVDHVLHQAA 109 (351)
T ss_dssp --TTTCSEEEECCC
T ss_pred --hcCCCEEEECCc
Confidence 347899987654
No 467
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=90.09 E-value=1.7 Score=31.85 Aligned_cols=84 Identities=15% Similarity=0.057 Sum_probs=53.6
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC--CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH--HHHHhhcc-cC
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIP--DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDE-KY 93 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~--~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--l~~~~~~~-~~ 93 (187)
+.+++|-.| |+|.++..+++.+. .+.+|++++.+++..+...+.+...+ .++.++.+|..+. +..+.+.. ..
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHHh
Confidence 456788777 56777777766553 25799999999887777666676554 4678888886542 22221110 00
Q ss_pred CCceeEEEEcCC
Q 029836 94 HGTFDFVFVDAD 105 (187)
Q Consensus 94 ~~~~D~v~~d~~ 105 (187)
.+.+|+|+..+.
T Consensus 80 ~g~id~li~~Ag 91 (276)
T 1wma_A 80 YGGLDVLVNNAG 91 (276)
T ss_dssp HSSEEEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 247899987643
No 468
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=90.06 E-value=2.6 Score=27.09 Aligned_cols=78 Identities=13% Similarity=0.094 Sum_probs=51.1
Q ss_pred CEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCCc-------ccHHHHHHHH
Q 029836 45 GKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKD-------NYVNYHKRLI 117 (187)
Q Consensus 45 ~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~~-------~~~~~~~~~~ 117 (187)
.+|..+|-++......+..++..|. .+. ...+..+.+..+. ...+|+|++|.... .-.++++.+.
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~ 75 (140)
T 2qr3_A 4 GTIIIVDDNKGVLTAVQLLLKNHFS--KVI-TLSSPVSLSTVLR-----EENPEVVLLDMNFTSGINNGNEGLFWLHEIK 75 (140)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTTSS--EEE-EECCHHHHHHHHH-----HSCEEEEEEETTTTC-----CCHHHHHHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHhCCc--EEE-EeCCHHHHHHHHH-----cCCCCEEEEeCCcCCCCCCCccHHHHHHHHH
Confidence 5789999999998888888877654 333 3455555555553 34699999997532 3455666666
Q ss_pred hcccCCeEEEEeC
Q 029836 118 ELVKVGGVIGYDN 130 (187)
Q Consensus 118 ~~L~~gG~lv~~~ 130 (187)
+..+.--++++.+
T Consensus 76 ~~~~~~~ii~ls~ 88 (140)
T 2qr3_A 76 RQYRDLPVVLFTA 88 (140)
T ss_dssp HHCTTCCEEEEEE
T ss_pred hhCcCCCEEEEEC
Confidence 5543444666543
No 469
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=90.06 E-value=1.1 Score=33.27 Aligned_cols=86 Identities=12% Similarity=0.122 Sum_probs=52.5
Q ss_pred EEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEE
Q 029836 22 NTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFV 100 (187)
Q Consensus 22 ~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v 100 (187)
+|.-||+ |.++..++..+. .+.+|+++|.+++..+.+. +.+... .. ..+..+. ...|+|
T Consensus 2 ~i~iiG~--G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~----~~g~~~--~~-~~~~~~~-----------~~~D~v 61 (279)
T 2f1k_A 2 KIGVVGL--GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV----ERQLVD--EA-GQDLSLL-----------QTAKII 61 (279)
T ss_dssp EEEEECC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH----HTTSCS--EE-ESCGGGG-----------TTCSEE
T ss_pred EEEEEcC--cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----hCCCCc--cc-cCCHHHh-----------CCCCEE
Confidence 5777887 444444444332 1358999999987765543 334321 11 2232222 246999
Q ss_pred EEcCCCcccHHHHHHHHhcccCCeEEE
Q 029836 101 FVDADKDNYVNYHKRLIELVKVGGVIG 127 (187)
Q Consensus 101 ~~d~~~~~~~~~~~~~~~~L~~gG~lv 127 (187)
++-.+.......++.+.+.++++.+++
T Consensus 62 i~av~~~~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 62 FLCTPIQLILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp EECSCHHHHHHHHHHHGGGSCTTCEEE
T ss_pred EEECCHHHHHHHHHHHHhhCCCCCEEE
Confidence 987765566777788878888887665
No 470
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=90.05 E-value=2.6 Score=27.15 Aligned_cols=78 Identities=14% Similarity=0.094 Sum_probs=52.3
Q ss_pred CCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCC--CcccHHHHHHHHh--c
Q 029836 44 DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDAD--KDNYVNYHKRLIE--L 119 (187)
Q Consensus 44 ~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~--~~~~~~~~~~~~~--~ 119 (187)
..+|..+|-++......+..+...|. ++ ....+..+.+..+. ...+|+|++|.. ..+-.++++.+.. .
T Consensus 6 ~~~iLivdd~~~~~~~l~~~l~~~g~--~v-~~~~~~~~a~~~l~-----~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~ 77 (140)
T 3grc_A 6 RPRILICEDDPDIARLLNLMLEKGGF--DS-DMVHSAAQALEQVA-----RRPYAAMTVDLNLPDQDGVSLIRALRRDSR 77 (140)
T ss_dssp CSEEEEECSCHHHHHHHHHHHHHTTC--EE-EEECSHHHHHHHHH-----HSCCSEEEECSCCSSSCHHHHHHHHHTSGG
T ss_pred CCCEEEEcCCHHHHHHHHHHHHHCCC--eE-EEECCHHHHHHHHH-----hCCCCEEEEeCCCCCCCHHHHHHHHHhCcc
Confidence 46899999999999999999988765 33 23456666665553 357999999976 2334566666665 3
Q ss_pred ccCCeEEEEe
Q 029836 120 VKVGGVIGYD 129 (187)
Q Consensus 120 L~~gG~lv~~ 129 (187)
.+.--++++.
T Consensus 78 ~~~~~ii~~s 87 (140)
T 3grc_A 78 TRDLAIVVVS 87 (140)
T ss_dssp GTTCEEEEEC
T ss_pred cCCCCEEEEe
Confidence 3333455554
No 471
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=90.02 E-value=2.7 Score=31.14 Aligned_cols=87 Identities=15% Similarity=0.045 Sum_probs=55.4
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH--HHHHhhcc-cC
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDE-KY 93 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--l~~~~~~~-~~ 93 (187)
.+.+++|-.|+ +|.++..+++.+. .+.+|++++.++...+...+.++..+...++.++.+|..+. +..+.+.. ..
T Consensus 30 l~~k~vlVTGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 30 WRDRLALVTGA-SGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp GTTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 35678888884 5666666665442 25799999999888777777777666545788888886542 22221110 00
Q ss_pred CCceeEEEEcCC
Q 029836 94 HGTFDFVFVDAD 105 (187)
Q Consensus 94 ~~~~D~v~~d~~ 105 (187)
.+.+|+++..+.
T Consensus 109 ~g~iD~vi~~Ag 120 (279)
T 1xg5_A 109 HSGVDICINNAG 120 (279)
T ss_dssp HCCCSEEEECCC
T ss_pred CCCCCEEEECCC
Confidence 247899987653
No 472
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=89.99 E-value=1.5 Score=28.66 Aligned_cols=93 Identities=18% Similarity=0.120 Sum_probs=50.9
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchH--HHHHHhhcccCCC
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDEKYHG 95 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~--~l~~~~~~~~~~~ 95 (187)
+.++|+-+|+ |..+..+++.+. .+.+|+.+|.+++..+.++ .. ...++.+|..+ .+.... .+
T Consensus 5 ~~~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~~----~~~~~~~d~~~~~~l~~~~-----~~ 69 (144)
T 2hmt_A 5 KNKQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SY----ATHAVIANATEENELLSLG-----IR 69 (144)
T ss_dssp -CCSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----TT----CSEEEECCTTCHHHHHTTT-----GG
T ss_pred cCCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----Hh----CCEEEEeCCCCHHHHHhcC-----CC
Confidence 3467999996 666666665442 2467999999876554322 11 23456666543 222210 24
Q ss_pred ceeEEEEcCCCc-ccHHHHHHHHhcccCCeEEE
Q 029836 96 TFDFVFVDADKD-NYVNYHKRLIELVKVGGVIG 127 (187)
Q Consensus 96 ~~D~v~~d~~~~-~~~~~~~~~~~~L~~gG~lv 127 (187)
.+|+|++..... ..........+.+.+. .++
T Consensus 70 ~~d~vi~~~~~~~~~~~~~~~~~~~~~~~-~ii 101 (144)
T 2hmt_A 70 NFEYVIVAIGANIQASTLTTLLLKELDIP-NIW 101 (144)
T ss_dssp GCSEEEECCCSCHHHHHHHHHHHHHTTCS-EEE
T ss_pred CCCEEEECCCCchHHHHHHHHHHHHcCCC-eEE
Confidence 689999866532 2222333334455665 444
No 473
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=89.94 E-value=0.56 Score=45.96 Aligned_cols=103 Identities=9% Similarity=0.002 Sum_probs=66.2
Q ss_pred hcCCCEEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCC
Q 029836 17 LINAKNTMEIG--VFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYH 94 (187)
Q Consensus 17 ~~~~~~vLeiG--~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~ 94 (187)
..++++||-.| .|.|..++.+++.. +++|++++.+++..+.+++.+...+. .. ++.....++...+.... ..
T Consensus 1665 l~~Ge~VLI~gaaGgVG~aAiqlAk~~--Ga~Viat~~s~~k~~~l~~~~~~lga-~~--v~~~~~~~~~~~i~~~t-~g 1738 (2512)
T 2vz8_A 1665 MQPGESVLIHSGSGGVGQAAIAIALSR--GCRVFTTVGSAEKRAYLQARFPQLDE-TC--FANSRDTSFEQHVLRHT-AG 1738 (2512)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTCCS-TT--EEESSSSHHHHHHHHTT-TS
T ss_pred CCCCCEEEEEeCChHHHHHHHHHHHHc--CCEEEEEeCChhhhHHHHhhcCCCCc-eE--EecCCCHHHHHHHHHhc-CC
Confidence 44678999987 46677788888876 47999999998887777654432333 12 22222223333332211 02
Q ss_pred CceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEe
Q 029836 95 GTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 95 ~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
..+|+|+--.. ...+...++.|+++|.++.-
T Consensus 1739 ~GvDvVld~~g----~~~l~~~l~~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1739 KGVDLVLNSLA----EEKLQASVRCLAQHGRFLEI 1769 (2512)
T ss_dssp CCEEEEEECCC----HHHHHHHHTTEEEEEEEEEC
T ss_pred CCceEEEECCC----chHHHHHHHhcCCCcEEEEe
Confidence 36999985331 46688899999999988763
No 474
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=89.90 E-value=2.7 Score=27.14 Aligned_cols=84 Identities=11% Similarity=-0.044 Sum_probs=51.2
Q ss_pred CEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCC--cccHHHHHHHHh----
Q 029836 45 GKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADK--DNYVNYHKRLIE---- 118 (187)
Q Consensus 45 ~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~--~~~~~~~~~~~~---- 118 (187)
.+|..+|-++......+..+...+....+ ....+..+.+..+.........+|+|++|... .+-.++++.+..
T Consensus 10 ~~iLivdd~~~~~~~l~~~l~~~~~~~~v-~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~ 88 (146)
T 3ilh_A 10 DSVLLIDDDDIVNFLNTTIIRMTHRVEEI-QSVTSGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQHFQP 88 (146)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTTCCEEEE-EEESSHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHHHCGG
T ss_pred ceEEEEeCCHHHHHHHHHHHHhcCCCeee-eecCCHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHHhhhh
Confidence 57999999998888888888876542122 23456655555543200001579999999762 334566777665
Q ss_pred cccCCeEEEEe
Q 029836 119 LVKVGGVIGYD 129 (187)
Q Consensus 119 ~L~~gG~lv~~ 129 (187)
....--++++.
T Consensus 89 ~~~~~~ii~~t 99 (146)
T 3ilh_A 89 MKNKSIVCLLS 99 (146)
T ss_dssp GTTTCEEEEEC
T ss_pred ccCCCeEEEEe
Confidence 33333455543
No 475
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=89.82 E-value=1.4 Score=39.44 Aligned_cols=76 Identities=9% Similarity=-0.084 Sum_probs=53.1
Q ss_pred CEEEEEcccccHHHHHHHhhCCCCC--EEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhc--------
Q 029836 21 KNTMEIGVFTGYSLLATALAIPDDG--KILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQD-------- 90 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~l~~~~~~~~--~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~-------- 90 (187)
.+++|+-||.|..++-+..+ +. .+.++|+++.+.+..+.|+ +...++.+|..++.......
T Consensus 541 l~~iDLFaG~GGlslGl~~A---G~~~vv~avEid~~A~~ty~~N~------p~~~~~~~DI~~l~~~~~~~di~~~~~~ 611 (1002)
T 3swr_A 541 LRTLDVFSGCGGLSEGFHQA---GISDTLWAIEMWDPAAQAFRLNN------PGSTVFTEDCNILLKLVMAGETTNSRGQ 611 (1002)
T ss_dssp EEEEEESCTTSHHHHHHHHH---TSEEEEEEECSSHHHHHHHHHHC------TTSEEECSCHHHHHHHHHHTCSBCTTCC
T ss_pred CeEEEeccCccHHHHHHHHC---CCCceEEEEECCHHHHHHHHHhC------CCCccccccHHHHhhhccchhhhhhhhh
Confidence 48999999999999988765 33 5789999999888776665 35667888876654321100
Q ss_pred -ccCCCceeEEEEcCC
Q 029836 91 -EKYHGTFDFVFVDAD 105 (187)
Q Consensus 91 -~~~~~~~D~v~~d~~ 105 (187)
....+.+|+|+...+
T Consensus 612 ~lp~~~~vDll~GGpP 627 (1002)
T 3swr_A 612 RLPQKGDVEMLCGGPP 627 (1002)
T ss_dssp BCCCTTTCSEEEECCC
T ss_pred hcccCCCeeEEEEcCC
Confidence 001246899988765
No 476
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=89.69 E-value=3.1 Score=27.43 Aligned_cols=79 Identities=13% Similarity=0.086 Sum_probs=51.6
Q ss_pred CCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCC--cccHHHHHHHHhccc
Q 029836 44 DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADK--DNYVNYHKRLIELVK 121 (187)
Q Consensus 44 ~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~--~~~~~~~~~~~~~L~ 121 (187)
..+|..+|-++......+..+...|. ++. ...+..+.+..+. ...+|+|++|... ..-.++++.+....+
T Consensus 3 ~~~ILivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dliild~~l~~~~g~~~~~~l~~~~~ 74 (155)
T 1qkk_A 3 APSVFLIDDDRDLRKAMQQTLELAGF--TVS-SFASATEALAGLS-----ADFAGIVISDIRMPGMDGLALFRKILALDP 74 (155)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHTTC--EEE-EESCHHHHHHTCC-----TTCCSEEEEESCCSSSCHHHHHHHHHHHCT
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCc--EEE-EECCHHHHHHHHH-----hCCCCEEEEeCCCCCCCHHHHHHHHHhhCC
Confidence 35789999999999989999988664 333 3455555555442 4579999999763 234556666665533
Q ss_pred CCeEEEEeC
Q 029836 122 VGGVIGYDN 130 (187)
Q Consensus 122 ~gG~lv~~~ 130 (187)
.--++++.+
T Consensus 75 ~~pii~ls~ 83 (155)
T 1qkk_A 75 DLPMILVTG 83 (155)
T ss_dssp TSCEEEEEC
T ss_pred CCCEEEEEC
Confidence 344666544
No 477
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=89.56 E-value=3 Score=33.15 Aligned_cols=90 Identities=18% Similarity=0.075 Sum_probs=54.4
Q ss_pred CEEEEEcccccHHHHHHHhhCCC--C--CEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchH--HHHHHhhcccCC
Q 029836 21 KNTMEIGVFTGYSLLATALAIPD--D--GKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALP--LLDQLIQDEKYH 94 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~l~~~~~~--~--~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~--~l~~~~~~~~~~ 94 (187)
++|+-+|+ |..+..+++.+.. . ..|+.++.+++..+...+.+...+- .++..+..|..+ .+..+.+.
T Consensus 2 ~kVlIiGa--GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~-~~~~~~~~D~~d~~~l~~~l~~---- 74 (405)
T 4ina_A 2 AKVLQIGA--GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGY-GEIDITTVDADSIEELVALINE---- 74 (405)
T ss_dssp CEEEEECC--SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTC-CCCEEEECCTTCHHHHHHHHHH----
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcC-CceEEEEecCCCHHHHHHHHHh----
Confidence 47889988 5666666655432 2 3899999999887766666654321 357777777643 33443211
Q ss_pred CceeEEEEcCCCcccHHHHHHHH
Q 029836 95 GTFDFVFVDADKDNYVNYHKRLI 117 (187)
Q Consensus 95 ~~~D~v~~d~~~~~~~~~~~~~~ 117 (187)
...|+|+............+.+.
T Consensus 75 ~~~DvVin~ag~~~~~~v~~a~l 97 (405)
T 4ina_A 75 VKPQIVLNIALPYQDLTIMEACL 97 (405)
T ss_dssp HCCSEEEECSCGGGHHHHHHHHH
T ss_pred hCCCEEEECCCcccChHHHHHHH
Confidence 13799987765433344444443
No 478
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=89.55 E-value=2.9 Score=26.96 Aligned_cols=79 Identities=13% Similarity=0.079 Sum_probs=52.8
Q ss_pred CCEEEEEeCCchHHHHHHHHHHH-cCCCCceEEEeCCchHHHHHHhhcccCC-CceeEEEEcCCCc-c--cHHHHHHHHh
Q 029836 44 DGKILALDITKEHYEKGLPIIQK-AGVAHKIDFREGPALPLLDQLIQDEKYH-GTFDFVFVDADKD-N--YVNYHKRLIE 118 (187)
Q Consensus 44 ~~~v~~vd~~~~~~~~a~~~~~~-~~~~~~i~~~~~d~~~~l~~~~~~~~~~-~~~D~v~~d~~~~-~--~~~~~~~~~~ 118 (187)
..+|..+|-++......+..+.. .+. ++. ...+..+.+..+. . ..+|+|++|.... . -.++++.+..
T Consensus 4 ~~~ilivdd~~~~~~~l~~~L~~~~~~--~v~-~~~~~~~a~~~l~-----~~~~~dlvi~D~~l~~~~~g~~~~~~l~~ 75 (140)
T 3lua_A 4 DGTVLLIDYFEYEREKTKIIFDNIGEY--DFI-EVENLKKFYSIFK-----DLDSITLIIMDIAFPVEKEGLEVLSAIRN 75 (140)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHHCCC--EEE-EECSHHHHHTTTT-----TCCCCSEEEECSCSSSHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhccCc--cEE-EECCHHHHHHHHh-----cCCCCcEEEEeCCCCCCCcHHHHHHHHHh
Confidence 36899999999999999999988 654 344 4456655555543 4 6899999998644 2 3455666655
Q ss_pred --cccCCeEEEEeC
Q 029836 119 --LVKVGGVIGYDN 130 (187)
Q Consensus 119 --~L~~gG~lv~~~ 130 (187)
..+.--++++..
T Consensus 76 ~~~~~~~~ii~ls~ 89 (140)
T 3lua_A 76 NSRTANTPVIIATK 89 (140)
T ss_dssp SGGGTTCCEEEEES
T ss_pred CcccCCCCEEEEeC
Confidence 344445666544
No 479
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=89.36 E-value=2.9 Score=29.44 Aligned_cols=68 Identities=12% Similarity=-0.023 Sum_probs=45.4
Q ss_pred EEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEE
Q 029836 22 NTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFV 100 (187)
Q Consensus 22 ~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v 100 (187)
+||-+| ++|.++..+++.+. .+.+|++++.++...... . .+++++.+|..+.-... -..+|.|
T Consensus 2 kvlVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~--~~~~~~~~D~~d~~~~~------~~~~d~v 65 (221)
T 3ew7_A 2 KIGIIG-ATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT-------H--KDINILQKDIFDLTLSD------LSDQNVV 65 (221)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH-------C--SSSEEEECCGGGCCHHH------HTTCSEE
T ss_pred eEEEEc-CCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc-------c--CCCeEEeccccChhhhh------hcCCCEE
Confidence 678777 56777777665552 257999999987654321 1 47889999987643322 2468999
Q ss_pred EEcCC
Q 029836 101 FVDAD 105 (187)
Q Consensus 101 ~~d~~ 105 (187)
+....
T Consensus 66 i~~ag 70 (221)
T 3ew7_A 66 VDAYG 70 (221)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 87654
No 480
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=89.33 E-value=3.3 Score=30.10 Aligned_cols=83 Identities=18% Similarity=0.088 Sum_probs=54.2
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH--HHHHhhcc-cCC
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDE-KYH 94 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--l~~~~~~~-~~~ 94 (187)
+.+++|-.|+. |.++..+++.+. .+.+|+.++.+++..+.+.+.++..+ .++.++.+|..+. +..+.+.. ...
T Consensus 8 ~~k~vlITGas-~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 8 ENKVGIVTGSG-GGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 56788988854 555566555442 25799999999988887777776654 4788888887542 22221110 002
Q ss_pred CceeEEEEcC
Q 029836 95 GTFDFVFVDA 104 (187)
Q Consensus 95 ~~~D~v~~d~ 104 (187)
+.+|+++..+
T Consensus 85 g~id~li~~A 94 (253)
T 3qiv_A 85 GGIDYLVNNA 94 (253)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 4789999765
No 481
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=89.18 E-value=3.1 Score=26.75 Aligned_cols=80 Identities=16% Similarity=-0.027 Sum_probs=51.6
Q ss_pred CCEEEEEeCCchHHHHHHHHHHH-cCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCC--cccHHHHHHHHh--
Q 029836 44 DGKILALDITKEHYEKGLPIIQK-AGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADK--DNYVNYHKRLIE-- 118 (187)
Q Consensus 44 ~~~v~~vd~~~~~~~~a~~~~~~-~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~--~~~~~~~~~~~~-- 118 (187)
..+|..+|-++......+..+.. .+. ++.....+..+.+..+. ...+|+|++|... ..-.++++.+..
T Consensus 8 ~~~iLivdd~~~~~~~l~~~L~~~~~~--~~v~~~~~~~~a~~~l~-----~~~~dlii~d~~l~~~~g~~~~~~l~~~~ 80 (143)
T 3cnb_A 8 DFSILIIEDDKEFADMLTQFLENLFPY--AKIKIAYNPFDAGDLLH-----TVKPDVVMLDLMMVGMDGFSICHRIKSTP 80 (143)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHHCTT--CEEEEECSHHHHHHHHH-----HTCCSEEEEETTCTTSCHHHHHHHHHTST
T ss_pred CceEEEEECCHHHHHHHHHHHHhccCc--cEEEEECCHHHHHHHHH-----hcCCCEEEEecccCCCcHHHHHHHHHhCc
Confidence 46899999999999999999988 665 32334455655555543 3469999999763 234566666665
Q ss_pred cccCCeEEEEeC
Q 029836 119 LVKVGGVIGYDN 130 (187)
Q Consensus 119 ~L~~gG~lv~~~ 130 (187)
..+.--++++.+
T Consensus 81 ~~~~~~ii~~s~ 92 (143)
T 3cnb_A 81 ATANIIVIAMTG 92 (143)
T ss_dssp TTTTSEEEEEES
T ss_pred cccCCcEEEEeC
Confidence 223334555543
No 482
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=89.17 E-value=5.3 Score=29.44 Aligned_cols=111 Identities=14% Similarity=0.131 Sum_probs=63.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCC-chHHHHHHHHHHHcCCCCceEEEeCCchHH--HHHHhhcc-c
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDIT-KEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDE-K 92 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~-~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--l~~~~~~~-~ 92 (187)
.+.+++|-.|++ |.++..+++.+. .+.+|+.++.. ++..+...+.++..+ .++.++.+|..+. +..+.+.. .
T Consensus 16 l~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 92 (270)
T 3is3_A 16 LDGKVALVTGSG-RGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG--SDAIAIKADIRQVPEIVKLFDQAVA 92 (270)
T ss_dssp CTTCEEEESCTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 356788888855 445555555442 25788887764 455566666666654 4788888886542 22221110 0
Q ss_pred CCCceeEEEEcCCC-----------ccc-----------HHHHHHHHhcccCCeEEEEeCc
Q 029836 93 YHGTFDFVFVDADK-----------DNY-----------VNYHKRLIELVKVGGVIGYDNT 131 (187)
Q Consensus 93 ~~~~~D~v~~d~~~-----------~~~-----------~~~~~~~~~~L~~gG~lv~~~~ 131 (187)
..+..|+++..+.. +++ ....+.+.+.++++|.+|+-..
T Consensus 93 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 93 HFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 02578999876431 011 1233455677888888776444
No 483
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=89.16 E-value=2.8 Score=31.20 Aligned_cols=85 Identities=13% Similarity=0.126 Sum_probs=52.7
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH--HHHHhhcc-cC
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDE-KY 93 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--l~~~~~~~-~~ 93 (187)
.+++++|-.|++ |.++..+++.+. .+.+|+.++.+++..+.+.+.++..+ .++.++.+|..+. +..+.+.. ..
T Consensus 22 ~~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 22 SRPQTAFVTGVS-SGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVER 98 (279)
T ss_dssp ---CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 356788988855 445555554442 25799999999988887777776654 4788888887542 22221110 00
Q ss_pred CCceeEEEEcCC
Q 029836 94 HGTFDFVFVDAD 105 (187)
Q Consensus 94 ~~~~D~v~~d~~ 105 (187)
.+..|+++..+.
T Consensus 99 ~g~id~lv~nAg 110 (279)
T 3sju_A 99 FGPIGILVNSAG 110 (279)
T ss_dssp HCSCCEEEECCC
T ss_pred cCCCcEEEECCC
Confidence 357899987653
No 484
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=89.15 E-value=2.8 Score=26.14 Aligned_cols=78 Identities=17% Similarity=0.103 Sum_probs=49.1
Q ss_pred CEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCCc--ccHHHHHHHHhcccC
Q 029836 45 GKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKD--NYVNYHKRLIELVKV 122 (187)
Q Consensus 45 ~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~~--~~~~~~~~~~~~L~~ 122 (187)
.++..+|-++......+..++..|. .+.....+..+.+..+. ...+|+|++|.... +-.++++.+.+.-..
T Consensus 3 ~~ilivdd~~~~~~~l~~~l~~~g~--~vv~~~~~~~~a~~~~~-----~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~ 75 (120)
T 1tmy_A 3 KRVLIVDDAAFMRMMLKDIITKAGY--EVAGEATNGREAVEKYK-----ELKPDIVTMDITMPEMNGIDAIKEIMKIDPN 75 (120)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH-----HHCCSEEEEECSCGGGCHHHHHHHHHHHCTT
T ss_pred ceEEEEcCcHHHHHHHHHHHhhcCc--EEEEEECCHHHHHHHHH-----hcCCCEEEEeCCCCCCcHHHHHHHHHhhCCC
Confidence 4688899999988888888887654 33334556666655543 34689999997632 334556665543222
Q ss_pred CeEEEEe
Q 029836 123 GGVIGYD 129 (187)
Q Consensus 123 gG~lv~~ 129 (187)
--++++.
T Consensus 76 ~~ii~~s 82 (120)
T 1tmy_A 76 AKIIVCS 82 (120)
T ss_dssp CCEEEEE
T ss_pred CeEEEEe
Confidence 2355543
No 485
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=89.01 E-value=5.3 Score=29.27 Aligned_cols=86 Identities=17% Similarity=0.095 Sum_probs=50.8
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH--HHHHhhcc-cCC
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDE-KYH 94 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--l~~~~~~~-~~~ 94 (187)
+.+++|-.|+ +|.++..+++.+. .+.+|++++.+++..+.+.+.+.......++.++.+|..+. +..+.+.. ...
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (267)
T 2gdz_A 6 NGKVALVTGA-AQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 84 (267)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 5678888885 5555666655442 25799999998876665555453321124688888886542 22221110 002
Q ss_pred CceeEEEEcCC
Q 029836 95 GTFDFVFVDAD 105 (187)
Q Consensus 95 ~~~D~v~~d~~ 105 (187)
+.+|+++..+.
T Consensus 85 g~id~lv~~Ag 95 (267)
T 2gdz_A 85 GRLDILVNNAG 95 (267)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 46899987754
No 486
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=88.82 E-value=3.3 Score=26.65 Aligned_cols=79 Identities=15% Similarity=0.137 Sum_probs=52.3
Q ss_pred CCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCC--cccHHHHHHHHh--c
Q 029836 44 DGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADK--DNYVNYHKRLIE--L 119 (187)
Q Consensus 44 ~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~--~~~~~~~~~~~~--~ 119 (187)
..+|..+|-++...+..+..+...|. ++. ...+..+.+..+. ...+|+|++|... ..-.++++.+.. .
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlii~d~~l~~~~g~~~~~~l~~~~~ 78 (142)
T 3cg4_A 7 KGDVMIVDDDAHVRIAVKTILSDAGF--HII-SADSGGQCIDLLK-----KGFSGVVLLDIMMPGMDGWDTIRAILDNSL 78 (142)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHH-----TCCCEEEEEESCCSSSCHHHHHHHHHHTTC
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHCCe--EEE-EeCCHHHHHHHHH-----hcCCCEEEEeCCCCCCCHHHHHHHHHhhcc
Confidence 46899999999999999999988764 333 3455555555553 4579999999763 234566666665 3
Q ss_pred ccCCeEEEEeC
Q 029836 120 VKVGGVIGYDN 130 (187)
Q Consensus 120 L~~gG~lv~~~ 130 (187)
...--++++.+
T Consensus 79 ~~~~pii~~s~ 89 (142)
T 3cg4_A 79 EQGIAIVMLTA 89 (142)
T ss_dssp CTTEEEEEEEC
T ss_pred cCCCCEEEEEC
Confidence 33334555543
No 487
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=88.79 E-value=0.76 Score=36.13 Aligned_cols=76 Identities=12% Similarity=0.062 Sum_probs=45.1
Q ss_pred cCCCEEEEEccc---ccHHHHHHHhhCCCCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCC
Q 029836 18 INAKNTMEIGVF---TGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYH 94 (187)
Q Consensus 18 ~~~~~vLeiG~g---~G~~~~~l~~~~~~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~ 94 (187)
.+.++||-+|+| .|..+..+++.. +.+|++++.+++..+.+++ .|...-+.....+..+.+..+.. .
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~~~~v~~~t~----~ 238 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKD--GIKLVNIVRKQEQADLLKA----QGAVHVCNAASPTFMQDLTEALV----S 238 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHH--TCCEEEEESSHHHHHHHHH----TTCSCEEETTSTTHHHHHHHHHH----H
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHh----CCCcEEEeCCChHHHHHHHHHhc----C
Confidence 567899998544 455666777765 4689999999988877654 55422222222233333333211 2
Q ss_pred CceeEEEEc
Q 029836 95 GTFDFVFVD 103 (187)
Q Consensus 95 ~~~D~v~~d 103 (187)
..+|+||-.
T Consensus 239 ~g~d~v~d~ 247 (379)
T 3iup_A 239 TGATIAFDA 247 (379)
T ss_dssp HCCCEEEES
T ss_pred CCceEEEEC
Confidence 369988843
No 488
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=88.67 E-value=3.5 Score=30.70 Aligned_cols=85 Identities=13% Similarity=0.048 Sum_probs=54.7
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH--HHHHhhcc-cC
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDE-KY 93 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--l~~~~~~~-~~ 93 (187)
.+.+++|-.|++ |.++..+++.+. .+.+|+.++.+++..+...+.++..+ .++.++.+|..+. +..+.+.. ..
T Consensus 30 l~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~~ 106 (276)
T 3r1i_A 30 LSGKRALITGAS-TGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG--GKALPIRCDVTQPDQVRGMLDQMTGE 106 (276)
T ss_dssp CTTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 356788888865 455555554442 25799999999988888777777655 4678888886542 22221110 00
Q ss_pred CCceeEEEEcCC
Q 029836 94 HGTFDFVFVDAD 105 (187)
Q Consensus 94 ~~~~D~v~~d~~ 105 (187)
.+.+|+++..+.
T Consensus 107 ~g~iD~lvnnAg 118 (276)
T 3r1i_A 107 LGGIDIAVCNAG 118 (276)
T ss_dssp HSCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 257899997654
No 489
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=88.66 E-value=1.5 Score=31.23 Aligned_cols=73 Identities=16% Similarity=0.145 Sum_probs=46.7
Q ss_pred CEEEEEcccccHHHHHHHhhCC--CCCEEEEEeCCch-HHHHHHHHHHHcCCCCceEEEeCCchHH--HHHHhhcccCCC
Q 029836 21 KNTMEIGVFTGYSLLATALAIP--DDGKILALDITKE-HYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDEKYHG 95 (187)
Q Consensus 21 ~~vLeiG~g~G~~~~~l~~~~~--~~~~v~~vd~~~~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~--l~~~~~~~~~~~ 95 (187)
++||-+| ++|.++..+++.+. .+.+|++++.+++ .++... .. ..+++++.+|..+. +.... .
T Consensus 6 k~vlVtG-asg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~~D~~d~~~~~~~~------~ 72 (221)
T 3r6d_A 6 XYITILG-AAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID--HERVTVIEGSFQNPGXLEQAV------T 72 (221)
T ss_dssp SEEEEES-TTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT--STTEEEEECCTTCHHHHHHHH------T
T ss_pred EEEEEEe-CCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC--CCceEEEECCCCCHHHHHHHH------c
Confidence 4588888 55666666655443 3679999999876 443221 11 25788999988642 33332 3
Q ss_pred ceeEEEEcCCC
Q 029836 96 TFDFVFVDADK 106 (187)
Q Consensus 96 ~~D~v~~d~~~ 106 (187)
..|+|+.....
T Consensus 73 ~~d~vv~~ag~ 83 (221)
T 3r6d_A 73 NAEVVFVGAME 83 (221)
T ss_dssp TCSEEEESCCC
T ss_pred CCCEEEEcCCC
Confidence 67999987653
No 490
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=88.64 E-value=5.6 Score=29.29 Aligned_cols=80 Identities=11% Similarity=0.022 Sum_probs=46.3
Q ss_pred CCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCc-------------------hHHHHHHHHHHHcCCCCceEEEeC
Q 029836 19 NAKNTMEIGVF-TGYSLLATALAIPDDGKILALDITK-------------------EHYEKGLPIIQKAGVAHKIDFREG 78 (187)
Q Consensus 19 ~~~~vLeiG~g-~G~~~~~l~~~~~~~~~v~~vd~~~-------------------~~~~~a~~~~~~~~~~~~i~~~~~ 78 (187)
+..+|+-+|+| .|......+...+ -++++.+|.+. ...+.+++.+.+.+-.-+++.+..
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~G-vg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~ 105 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAG-VGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQ 105 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTT-CSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcC-CCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEec
Confidence 46799999997 4443333333322 47899998764 445666677776543334555554
Q ss_pred Cch-HHHHHHhhcccCCCceeEEEEcCC
Q 029836 79 PAL-PLLDQLIQDEKYHGTFDFVFVDAD 105 (187)
Q Consensus 79 d~~-~~l~~~~~~~~~~~~~D~v~~d~~ 105 (187)
... +.+..+ -..+|+|+.-.+
T Consensus 106 ~~~~~~~~~~------~~~~DvVi~~~d 127 (251)
T 1zud_1 106 RLTGEALKDA------VARADVVLDCTD 127 (251)
T ss_dssp CCCHHHHHHH------HHHCSEEEECCS
T ss_pred cCCHHHHHHH------HhcCCEEEECCC
Confidence 332 223333 236899985443
No 491
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=88.63 E-value=1.1 Score=33.74 Aligned_cols=88 Identities=9% Similarity=-0.023 Sum_probs=54.6
Q ss_pred CCEEEEEcccccHHHHHHHhhCCC-C---CEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCC
Q 029836 20 AKNTMEIGVFTGYSLLATALAIPD-D---GKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHG 95 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~~~~~~-~---~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~ 95 (187)
.++|.-||+| ..+..++..+.. + .+|+..|.+++..+.+.+. .+ ++. ..+..+.+ .
T Consensus 3 ~~~I~iIG~G--~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~---~g----i~~-~~~~~~~~----------~ 62 (280)
T 3tri_A 3 TSNITFIGGG--NMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEK---CG----VHT-TQDNRQGA----------L 62 (280)
T ss_dssp CSCEEEESCS--HHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHT---TC----CEE-ESCHHHHH----------S
T ss_pred CCEEEEEccc--HHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHH---cC----CEE-eCChHHHH----------h
Confidence 3578889885 444444333211 2 3799999999877655442 22 232 22332222 2
Q ss_pred ceeEEEEcCCCcccHHHHHHHHhc-ccCCeEEE
Q 029836 96 TFDFVFVDADKDNYVNYHKRLIEL-VKVGGVIG 127 (187)
Q Consensus 96 ~~D~v~~d~~~~~~~~~~~~~~~~-L~~gG~lv 127 (187)
..|+|++--.++...+.++.+.+. ++++.+++
T Consensus 63 ~aDvVilav~p~~~~~vl~~l~~~~l~~~~iii 95 (280)
T 3tri_A 63 NADVVVLAVKPHQIKMVCEELKDILSETKILVI 95 (280)
T ss_dssp SCSEEEECSCGGGHHHHHHHHHHHHHTTTCEEE
T ss_pred cCCeEEEEeCHHHHHHHHHHHHhhccCCCeEEE
Confidence 469999987777778888888887 87776655
No 492
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=88.54 E-value=6.4 Score=29.59 Aligned_cols=85 Identities=18% Similarity=0.216 Sum_probs=55.3
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH--HHHHhhcc-cC
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDE-KY 93 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--l~~~~~~~-~~ 93 (187)
.+.+++|-.|++ |.++..+++.+. .+.+|+.++.+++.++.+.+.++..+ .++.++.+|..+. +..+.+.. ..
T Consensus 29 l~gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 29 FDGRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG--FDAHGVVCDVRHLDEMVRLADEAFRL 105 (301)
T ss_dssp STTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHh
Confidence 356789988865 445555555442 25799999999998888877777654 4788888887542 22221110 00
Q ss_pred CCceeEEEEcCC
Q 029836 94 HGTFDFVFVDAD 105 (187)
Q Consensus 94 ~~~~D~v~~d~~ 105 (187)
.+.+|+++..+.
T Consensus 106 ~g~id~lvnnAg 117 (301)
T 3tjr_A 106 LGGVDVVFSNAG 117 (301)
T ss_dssp HSSCSEEEECCC
T ss_pred CCCCCEEEECCC
Confidence 257899987754
No 493
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=88.52 E-value=3.2 Score=31.91 Aligned_cols=98 Identities=14% Similarity=0.088 Sum_probs=57.0
Q ss_pred CCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHH----cCCCC--ceEEEeCCchHHHHHHhhccc
Q 029836 20 AKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQK----AGVAH--KIDFREGPALPLLDQLIQDEK 92 (187)
Q Consensus 20 ~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~----~~~~~--~i~~~~~d~~~~l~~~~~~~~ 92 (187)
..+|.-||+| ..+..++..+. .+.+|+.+|.+++.++..++.... .+... ++.....+. ...
T Consensus 4 ~mki~iiG~G--~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----- 72 (359)
T 1bg6_A 4 SKTYAVLGLG--NGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDI----GLA----- 72 (359)
T ss_dssp CCEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCH----HHH-----
T ss_pred cCeEEEECCC--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCH----HHH-----
Confidence 3689999885 44444443331 146899999998877655442100 00000 000111222 221
Q ss_pred CCCceeEEEEcCCCcccHHHHHHHHhcccCCeEEEEe
Q 029836 93 YHGTFDFVFVDADKDNYVNYHKRLIELVKVGGVIGYD 129 (187)
Q Consensus 93 ~~~~~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv~~ 129 (187)
-..+|+|++-.+.....+.++.+.+.+++|..++..
T Consensus 73 -~~~~D~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 73 -VKDADVILIVVPAIHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp -HTTCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred -HhcCCEEEEeCCchHHHHHHHHHHHhCCCCCEEEEc
Confidence 135799999877666678888888899998877643
No 494
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=88.47 E-value=1.3 Score=34.14 Aligned_cols=77 Identities=16% Similarity=0.113 Sum_probs=52.2
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCC--CC-EEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH--HHHHhhccc
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIPD--DG-KILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDEK 92 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~~--~~-~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--l~~~~~~~~ 92 (187)
.+.++||-.| |+|.++..+++.+.. +. +|++++.++.......+.+. ..+++++.+|..+. +...
T Consensus 19 ~~~k~vlVTG-atG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~v~~~~~Dl~d~~~l~~~----- 88 (344)
T 2gn4_A 19 LDNQTILITG-GTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN----DPRMRFFIGDVRDLERLNYA----- 88 (344)
T ss_dssp TTTCEEEEET-TTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC----CTTEEEEECCTTCHHHHHHH-----
T ss_pred hCCCEEEEEC-CCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc----CCCEEEEECCCCCHHHHHHH-----
Confidence 4567899887 578888777665531 33 89999998876655444442 15789999998653 3333
Q ss_pred CCCceeEEEEcCC
Q 029836 93 YHGTFDFVFVDAD 105 (187)
Q Consensus 93 ~~~~~D~v~~d~~ 105 (187)
-..+|.||..+.
T Consensus 89 -~~~~D~Vih~Aa 100 (344)
T 2gn4_A 89 -LEGVDICIHAAA 100 (344)
T ss_dssp -TTTCSEEEECCC
T ss_pred -HhcCCEEEECCC
Confidence 346899997664
No 495
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=88.40 E-value=6 Score=31.16 Aligned_cols=121 Identities=11% Similarity=0.102 Sum_probs=66.0
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCch-HHHHHHHH-HHHcCCCCceEEEeCCch
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKE-HYEKGLPI-IQKAGVAHKIDFREGPAL 81 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~-~~~~a~~~-~~~~~~~~~i~~~~~d~~ 81 (187)
+|...++-+.++.......++-+++|+..... +...+.++.+|+..+..-. ........ ++..|. ++.++..+..
T Consensus 66 ~p~~~~l~~~la~l~g~~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~--~~~~v~~~d~ 142 (400)
T 3nmy_A 66 NPTRFAYERCVAALEGGTRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGL--DFSFVDLTDP 142 (400)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCC--EEEEECTTSH
T ss_pred CHHHHHHHHHHHHHhCCCCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCe--EEEEECCCCH
Confidence 46667777778877777788877777655444 3333344567777776544 33444444 555554 4555554433
Q ss_pred HHHHHHhhcccCCCceeEEEEcCC--CcccHHHHHHHHhccc-CCeEEEEeCcC
Q 029836 82 PLLDQLIQDEKYHGTFDFVFVDAD--KDNYVNYHKRLIELVK-VGGVIGYDNTL 132 (187)
Q Consensus 82 ~~l~~~~~~~~~~~~~D~v~~d~~--~~~~~~~~~~~~~~L~-~gG~lv~~~~~ 132 (187)
+.+.... .+...+|++... +......++.+.++.+ .|..+++|++.
T Consensus 143 ~~l~~~i-----~~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~ 191 (400)
T 3nmy_A 143 AAFKAAI-----RADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTF 191 (400)
T ss_dssp HHHHHHC-----CTTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTT
T ss_pred HHHHHHh-----ccCCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCC
Confidence 4444332 345578887543 1111111333433333 35667777764
No 496
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=88.40 E-value=6.6 Score=29.54 Aligned_cols=88 Identities=9% Similarity=-0.027 Sum_probs=50.2
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCc
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGT 96 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~ 96 (187)
..+++|+-||+| ..+..+++.+. .+.+|+++|.+++..+.+. ..+. +... . +.+..+ -..
T Consensus 153 l~g~~v~IiG~G--~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~----~~g~----~~~~--~-~~l~~~------l~~ 213 (293)
T 3d4o_A 153 IHGANVAVLGLG--RVGMSVARKFAALGAKVKVGARESDLLARIA----EMGM----EPFH--I-SKAAQE------LRD 213 (293)
T ss_dssp STTCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTS----EEEE--G-GGHHHH------TTT
T ss_pred CCCCEEEEEeeC--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----HCCC----eecC--h-hhHHHH------hcC
Confidence 457899999975 44444433221 1469999999886544332 3332 2221 1 123333 246
Q ss_pred eeEEEEcCCCcccHHHHHHHHhcccCCeEEE
Q 029836 97 FDFVFVDADKDNYVNYHKRLIELVKVGGVIG 127 (187)
Q Consensus 97 ~D~v~~d~~~~~~~~~~~~~~~~L~~gG~lv 127 (187)
.|+|+...+...... .....+++|++++
T Consensus 214 aDvVi~~~p~~~i~~---~~l~~mk~~~~li 241 (293)
T 3d4o_A 214 VDVCINTIPALVVTA---NVLAEMPSHTFVI 241 (293)
T ss_dssp CSEEEECCSSCCBCH---HHHHHSCTTCEEE
T ss_pred CCEEEECCChHHhCH---HHHHhcCCCCEEE
Confidence 799998765322211 3445789998876
No 497
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=88.36 E-value=8.4 Score=30.74 Aligned_cols=123 Identities=15% Similarity=0.103 Sum_probs=66.7
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCchHH-HHHHHHHHHcCCCCceEEEeCCchH
Q 029836 4 SPDEAQFFSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHY-EKGLPIIQKAGVAHKIDFREGPALP 82 (187)
Q Consensus 4 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~l~~~~~~~~~v~~vd~~~~~~-~~a~~~~~~~~~~~~i~~~~~d~~~ 82 (187)
+|...++-+.++........+-+++|+......+...+.++.+|++.+..-... ......++..|. ++.++..+..+
T Consensus 81 ~p~~~~le~~lA~l~g~~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~--~~~~v~~~d~~ 158 (430)
T 3ri6_A 81 NPTVEDLEQRLKNLTGALGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGI--EVRFVDVMDSL 158 (430)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTC--EEEEECTTCHH
T ss_pred CHHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCC--EEEEeCCCCHH
Confidence 466677777787777777777777766544444444455456777766654333 333335556665 56666544333
Q ss_pred HHHHHhhcccCCCceeEEEEcCC--CcccHHHHHHHHhcccC-CeEEEEeCcCC
Q 029836 83 LLDQLIQDEKYHGTFDFVFVDAD--KDNYVNYHKRLIELVKV-GGVIGYDNTLW 133 (187)
Q Consensus 83 ~l~~~~~~~~~~~~~D~v~~d~~--~~~~~~~~~~~~~~L~~-gG~lv~~~~~~ 133 (187)
.+.... .....+|++... +......++.+.++.+. |..+++|++..
T Consensus 159 ~l~~ai-----~~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~ 207 (430)
T 3ri6_A 159 AVEHAC-----DETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMT 207 (430)
T ss_dssp HHHHHC-----CTTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTS
T ss_pred HHHHhh-----CCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCc
Confidence 333332 345678887543 11111113334444443 55677787754
No 498
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=88.34 E-value=2.4 Score=32.40 Aligned_cols=86 Identities=19% Similarity=0.141 Sum_probs=49.9
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCce
Q 029836 19 NAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTF 97 (187)
Q Consensus 19 ~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~ 97 (187)
.+++|.-||. |..+..+++.+. .+.+|++.|.++.. +.+ ...|. +. .+..+.++ ..
T Consensus 141 ~g~~vgIiG~--G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~----~~~g~----~~--~~l~ell~----------~a 197 (307)
T 1wwk_A 141 EGKTIGIIGF--GRIGYQVAKIANALGMNILLYDPYPNE-ERA----KEVNG----KF--VDLETLLK----------ES 197 (307)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHHTTCEEEEECSSCCH-HHH----HHTTC----EE--CCHHHHHH----------HC
T ss_pred CCceEEEEcc--CHHHHHHHHHHHHCCCEEEEECCCCCh-hhH----hhcCc----cc--cCHHHHHh----------hC
Confidence 4568888877 555555554331 24799999998865 222 23332 22 24333333 45
Q ss_pred eEEEEcCCC-cccHHHH-HHHHhcccCCeEEE
Q 029836 98 DFVFVDADK-DNYVNYH-KRLIELVKVGGVIG 127 (187)
Q Consensus 98 D~v~~d~~~-~~~~~~~-~~~~~~L~~gG~lv 127 (187)
|+|++..+. .....++ +...+.||+|++++
T Consensus 198 DvV~l~~p~~~~t~~li~~~~l~~mk~ga~li 229 (307)
T 1wwk_A 198 DVVTIHVPLVESTYHLINEERLKLMKKTAILI 229 (307)
T ss_dssp SEEEECCCCSTTTTTCBCHHHHHHSCTTCEEE
T ss_pred CEEEEecCCChHHhhhcCHHHHhcCCCCeEEE
Confidence 999987652 2222223 34567889999887
No 499
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=88.31 E-value=3.2 Score=30.49 Aligned_cols=85 Identities=13% Similarity=0.061 Sum_probs=54.8
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHH--HHHHhhcc-cC
Q 029836 18 INAKNTMEIGVFTGYSLLATALAIP-DDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPL--LDQLIQDE-KY 93 (187)
Q Consensus 18 ~~~~~vLeiG~g~G~~~~~l~~~~~-~~~~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--l~~~~~~~-~~ 93 (187)
.+.+++|-.|+ +|.++..+++.+. .+.+|+.++.+++..+...+.+...+ .++.++.+|..+. +..+.+.. ..
T Consensus 27 l~~k~vlITGa-s~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 27 LSGQVAVVTGA-SRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG--GEAESHACDLSHSDAIAAFATGVLAA 103 (262)
T ss_dssp TTTCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHHHh
Confidence 34678888885 4556666665542 35789999999988888777777654 4788888887532 22221110 00
Q ss_pred CCceeEEEEcCC
Q 029836 94 HGTFDFVFVDAD 105 (187)
Q Consensus 94 ~~~~D~v~~d~~ 105 (187)
.+..|+++..+.
T Consensus 104 ~g~id~lv~~Ag 115 (262)
T 3rkr_A 104 HGRCDVLVNNAG 115 (262)
T ss_dssp HSCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 257899987643
No 500
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=88.23 E-value=3.1 Score=25.67 Aligned_cols=77 Identities=19% Similarity=0.231 Sum_probs=49.2
Q ss_pred EEEEEeCCchHHHHHHHHHHHcCCCCceEEEeCCchHHHHHHhhcccCCCceeEEEEcCCCc--ccHHHHHHHHhcccCC
Q 029836 46 KILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKD--NYVNYHKRLIELVKVG 123 (187)
Q Consensus 46 ~v~~vd~~~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~l~~~~~~~~~~~~~D~v~~d~~~~--~~~~~~~~~~~~L~~g 123 (187)
++..+|-++......+..+...|. .+. ...+..+.+..+. ...+|+|++|.... +-.++++.+.+.-..-
T Consensus 3 ~ilivdd~~~~~~~l~~~l~~~~~--~v~-~~~~~~~a~~~~~-----~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ 74 (116)
T 3a10_A 3 RILVVDDEPNIRELLKEELQEEGY--EID-TAENGEEALKKFF-----SGNYDLVILDIEMPGISGLEVAGEIRKKKKDA 74 (116)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHH-----HSCCSEEEECSCCSSSCHHHHHHHHHHHCTTC
T ss_pred EEEEEeCCHHHHHHHHHHHHHCCC--EEE-EeCCHHHHHHHHh-----cCCCCEEEEECCCCCCCHHHHHHHHHccCCCC
Confidence 678899999998888888887654 333 4455555555543 34689999997632 3345566655443233
Q ss_pred eEEEEeC
Q 029836 124 GVIGYDN 130 (187)
Q Consensus 124 G~lv~~~ 130 (187)
-++++.+
T Consensus 75 ~ii~~s~ 81 (116)
T 3a10_A 75 KIILLTA 81 (116)
T ss_dssp CEEEEES
T ss_pred eEEEEEC
Confidence 4555543
Done!