BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029837
(187 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q38853|STR15_ARATH Rhodanese-like domain-containing protein 15, chloroplastic
OS=Arabidopsis thaliana GN=STR15 PE=2 SV=1
Length = 182
Score = 152 bits (384), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 116/192 (60%), Gaps = 19/192 (9%)
Query: 1 MEATSLISLSSFAAGASSLPPVLCPHGN------NRRGLLSLTVDQQRCDNIGFISSKIL 54
ME T+ + S +S++ P L G+ RRG++ V R N + +
Sbjct: 1 METTAFNTTSRIGNWSSAISPPLQTCGSFKCQLPTRRGVI---VADLRNSNFRWRKATTT 57
Query: 55 SFCPKASLRGNL--EAVGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPY 112
S RGN+ EAV +PTSVPVRVA EL QAG+RYLDVRTP+EFS GH T AINVPY
Sbjct: 58 S-------RGNVAAEAVKIPTSVPVRVARELAQAGYRYLDVRTPDEFSIGHPTRAINVPY 110
Query: 113 MYRVGSGMTKNLKFVEEVSTRFRKHDE-IIGCQSGKRSMMAATDLLNAVSTHANYPSKPL 171
MYRVGSGM KN F+ +VS+ FRKHDE IIGC+SG+ S MA+TDLL A T +
Sbjct: 111 MYRVGSGMVKNPSFLRQVSSHFRKHDEIIIGCESGQMSFMASTDLLTAGFTAITDIAGGY 170
Query: 172 TWFLSNQLLTEE 183
+ N+L EE
Sbjct: 171 VAWTENELPVEE 182
>sp|P27626|DIN1_RAPSA Senescence-associated protein DIN1 OS=Raphanus sativus GN=DIN1 PE=2
SV=1
Length = 183
Score = 137 bits (345), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 85/113 (75%), Gaps = 1/113 (0%)
Query: 72 PTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVS 131
PTSVPVRVA EL QAG+++LDVRTP+EFS GH + AINVPYMYRVGSGM KN F+ +VS
Sbjct: 71 PTSVPVRVARELAQAGYKHLDVRTPDEFSIGHPSRAINVPYMYRVGSGMVKNPSFLRQVS 130
Query: 132 TRFRKHDE-IIGCQSGKRSMMAATDLLNAVSTHANYPSKPLTWFLSNQLLTEE 183
+ FRKHDE IIGC+SG+RS+MA+T+LL A T + + N+L EE
Sbjct: 131 SHFRKHDEIIIGCESGERSLMASTELLTAGFTGVTDIAGGYVPWTENELPVEE 183
>sp|Q39129|STR16_ARATH Thiosulfate sulfurtransferase 16, chloroplastic OS=Arabidopsis
thaliana GN=STR16 PE=1 SV=2
Length = 120
Score = 127 bits (318), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 72/90 (80%), Gaps = 1/90 (1%)
Query: 71 VPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEV 130
VP+SV V VAH+LL AGHRYLDVRTPEEFS GHA GAINVPYM R SGM+KN F+E+V
Sbjct: 7 VPSSVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNPDFLEQV 66
Query: 131 STRFRKHDEII-GCQSGKRSMMAATDLLNA 159
S+ F + D II GCQSG RS+ A TDLL+A
Sbjct: 67 SSHFGQSDNIIVGCQSGGRSIKATTDLLHA 96
>sp|Q9FKW8|STR18_ARATH Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana GN=STR18
PE=1 SV=1
Length = 136
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 74 SVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGA--INVPYMYRVGSGMTKNLKFVEEVS 131
SV V A LLQ+GH+YLDVRT +EF GH A +N+PYM G KN +F+E+VS
Sbjct: 16 SVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTPQGRVKNQEFLEQVS 75
Query: 132 TRFRKHDEI-IGCQSGKRSMMAATDLLNA 159
+ D+I +GCQSG RS+ A T+L+ A
Sbjct: 76 SLLNPADDILVGCQSGARSLKATTELVAA 104
>sp|Q8RUD6|STR19_ARATH Rhodanese-like domain-containing protein 19, mitochondrial
OS=Arabidopsis thaliana GN=STR19 PE=2 SV=1
Length = 169
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 74 SVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR 133
+V V A L GHRYLDVRT EEF+ H A+N+PYM++ G N F+ +V++
Sbjct: 43 TVDVYTAKGFLSTGHRYLDVRTNEEFAKSHVEEALNIPYMFKTDEGRVINPDFLSQVASV 102
Query: 134 FRKHDE-IIGCQSGKRSMMAATDLLNAVSTH 163
+K + I+ C +G R A DLLN H
Sbjct: 103 CKKDEHLIVACNAGGRGSRACVDLLNEGYDH 133
>sp|F4IPI4|STR17_ARATH Rhodanese-like domain-containing protein 17 OS=Arabidopsis thaliana
GN=STR17 PE=2 SV=1
Length = 156
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 74 SVPVRVAHELLQAGHRYLDVRTPEEFSAGH--ATGAINVPYMYRVGSGMTKNLKFVEEVS 131
++ V A +LL +G+ +LDVRT EEF GH + NVPY G N F++ VS
Sbjct: 34 TIDVNQAQKLLDSGYTFLDVRTVEEFKKGHVDSENVFNVPYWLYTPQGQEINPNFLKHVS 93
Query: 132 TRFRKHDE-IIGCQSGKRSMMAATDLLNA 159
+ + D I+GC+SG RS+ A L+++
Sbjct: 94 SLCNQTDHLILGCKSGVRSLHATKFLVSS 122
>sp|P54433|YRKF_BACSU UPF0033 protein YrkF OS=Bacillus subtilis (strain 168) GN=yrkF PE=3
SV=1
Length = 185
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 13/64 (20%)
Query: 91 LDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEI-IGCQSGKRS 149
LDVR EE+ H G +++P L VE+ + ++DEI I C SG+RS
Sbjct: 108 LDVREIEEYEKAHIPGVVHIP------------LGEVEKRANELNENDEIYIICHSGRRS 155
Query: 150 MMAA 153
MAA
Sbjct: 156 EMAA 159
>sp|A1S1Z4|SELU_SHEAM tRNA 2-selenouridine synthase OS=Shewanella amazonensis (strain
ATCC BAA-1098 / SB2B) GN=selU PE=3 SV=1
Length = 367
Score = 38.1 bits (87), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 74 SVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYM 113
+VP + E+ GH +DVR P EFS G A+N+P M
Sbjct: 5 TVPAKQYREIFLKGHPIMDVRAPIEFSKGAFPNAVNLPLM 44
>sp|Q94A65|STR14_ARATH Rhodanese-like domain-containing protein 14, chloroplastic
OS=Arabidopsis thaliana GN=At4g27700 PE=2 SV=1
Length = 224
Score = 38.1 bits (87), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 22/104 (21%)
Query: 74 SVPVRVAHELLQAGH-RYLDVRTPEEFSAGHATGAINVPYMYR----------------- 115
SV V+ A L + + LDVR E+ AGH GAINV MYR
Sbjct: 76 SVDVKEAQRLQKENNFVILDVRPEAEYKAGHPPGAINVE-MYRLIREWTAWDIARRLGFA 134
Query: 116 ---VGSGMTKNLKFVEEVSTRFRKHDEIIGCQSGKRSMMAATDL 156
+ SG +N +F++ V + K +II S +M +L
Sbjct: 135 FFGIFSGTEENPEFIQSVEAKLDKEAKIIVACSSAGTMKPTQNL 178
>sp|P23857|PSPE_ECOLI Thiosulfate sulfurtransferase PspE OS=Escherichia coli (strain K12)
GN=pspE PE=1 SV=1
Length = 104
Score = 36.6 bits (83), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 13/80 (16%)
Query: 86 AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF-RKHDEI-IGC 143
A ++DVR PE++ H GAIN+P K +K E ++T K+D + + C
Sbjct: 19 AAEHWIDVRVPEQYQQEHVQGAINIP---------LKEVK--ERIATAVPDKNDTVKVYC 67
Query: 144 QSGKRSMMAATDLLNAVSTH 163
+G++S A L TH
Sbjct: 68 NAGRQSGQAKEILSEMGYTH 87
>sp|P54510|YQHL_BACSU Uncharacterized protein YqhL OS=Bacillus subtilis (strain 168)
GN=yqhL PE=4 SV=2
Length = 126
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 79 VAHELLQAGHR---YLDVRTPEEFSAGHATGAINVP 111
+ E +AG+R +DVR P EF GH GA N+P
Sbjct: 31 LTEEEFRAGYRKAQLIDVREPNEFEGGHILGARNIP 66
>sp|Q2NW64|MIAA_SODGM tRNA dimethylallyltransferase OS=Sodalis glossinidius (strain
morsitans) GN=miaA PE=3 SV=1
Length = 312
Score = 34.3 bits (77), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 52/129 (40%), Gaps = 29/129 (22%)
Query: 80 AHELLQAGHRYLDVRTP-EEFSA-----------GHATGAINVPYMYRVGSGMTKNLKFV 127
A EL +A HR +D+R P E +SA T A +P + VG M +
Sbjct: 59 ADELARAPHRLIDIRDPAEAYSAADFRRDALKEMAEITEAGRIPLL--VGGTMLYFKALL 116
Query: 128 E----------EVSTRFRKHDEIIGCQSGKRSMMAATDLLNAVSTHANYPSKPL----TW 173
E EV R + E +G Q+ R + D + A H N P + L +
Sbjct: 117 EGLSPLPSADPEVRARIEREAETVGWQALHRQLQ-QIDPIAANRIHPNDPQRLLRALEVF 175
Query: 174 FLSNQLLTE 182
F+S LTE
Sbjct: 176 FVSGNTLTE 184
>sp|A4VHH7|GLPE_PSEU5 Thiosulfate sulfurtransferase GlpE OS=Pseudomonas stutzeri (strain
A1501) GN=glpE PE=3 SV=1
Length = 109
Score = 34.3 bits (77), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 11/84 (13%)
Query: 75 VPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF 134
+P AH + AG +D+R P F+ GH +G+ ++ N + ++
Sbjct: 7 IPPEQAHAMRNAGAVIVDIRDPHSFANGHISGSRHL-----------DNHSLPDFIAAAD 55
Query: 135 RKHDEIIGCQSGKRSMMAATDLLN 158
H I+ C G S AA L+N
Sbjct: 56 LDHPLIVTCYHGHSSQSAAAYLVN 79
>sp|Q12305|RDL1_YEAST Thiosulfate sulfurtransferase RDL1, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RDL1 PE=1
SV=1
Length = 139
Score = 33.9 bits (76), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 91 LDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDE----IIGCQSG 146
+DVR P E+S H +INVPY + L+F +++ K D I C SG
Sbjct: 44 VDVREPSEYSIVHIPASINVPYRSHPDAFALDPLEFEKQIG--IPKPDSAKELIFYCASG 101
Query: 147 KR 148
KR
Sbjct: 102 KR 103
>sp|A9MLB3|SELU_SALAR tRNA 2-selenouridine synthase OS=Salmonella arizonae (strain ATCC
BAA-731 / CDC346-86 / RSK2980) GN=selU PE=3 SV=1
Length = 361
Score = 33.5 bits (75), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 19/33 (57%)
Query: 81 HELLQAGHRYLDVRTPEEFSAGHATGAINVPYM 113
H LL A +DVR P EF G GAIN+P M
Sbjct: 8 HALLIADTPLIDVRAPIEFQQGAMPGAINLPLM 40
>sp|Q10215|RDL_SCHPO Putative thiosulfate sulfurtransferase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC4H3.07c PE=3 SV=2
Length = 142
Score = 33.5 bits (75), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 91 LDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR---FRK----HDEIIGC 143
+DVR P+EF G + N+P VG + + +K +E ++ F K + ++ C
Sbjct: 50 IDVREPDEFKQGAIETSYNLP----VGK-IEEAMKLSDEEFSKTYGFSKPVFEDNVVVYC 104
Query: 144 QSGKRSMMAATDLLNAVSTH--ANYPSKPLTW 173
+SG+RS A+D+L + NY L W
Sbjct: 105 RSGRRS-TTASDILTKLGYKNIGNYTGSWLEW 135
>sp|A0KRK0|SELU_SHESA tRNA 2-selenouridine synthase OS=Shewanella sp. (strain ANA-3)
GN=selU PE=3 SV=1
Length = 365
Score = 33.5 bits (75), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 75 VPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYM 113
+P + H++ AG +D+R P EF G ++N+P M
Sbjct: 6 IPAQQYHDIFIAGQPLIDLRAPIEFDRGAFPSSVNLPLM 44
>sp|A8G1H1|SELU_SHESH tRNA 2-selenouridine synthase OS=Shewanella sediminis (strain
HAW-EB3) GN=selU PE=3 SV=1
Length = 369
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 75 VPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYM 113
VP E++ +GH +DVR P EF+ G + N+P M
Sbjct: 6 VPKSAYREIMLSGHPMMDVRAPIEFNKGAFPSSTNLPLM 44
>sp|Q6MK43|SELU_BDEBA tRNA 2-selenouridine synthase OS=Bdellovibrio bacteriovorus (strain
ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) GN=selU PE=3
SV=2
Length = 379
Score = 33.1 bits (74), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 83 LLQAGHRYLDVRTPEEFSAGHATGAINVPYM 113
L Q +DVR P EFS G GA+N+P M
Sbjct: 14 LFQQNIPLMDVRAPVEFSQGSIPGAVNLPVM 44
>sp|B4GKQ3|MOCS3_DROPE Adenylyltransferase and sulfurtransferase MOCS3 OS=Drosophila
persimilis GN=GL26133 PE=3 SV=1
Length = 451
Score = 33.1 bits (74), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 77 VRVAHELLQAG-HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFR 135
V+ H+ LQ+ H LDVR P EF +INVP + K +F +++ +
Sbjct: 345 VKEYHQKLQSQPHLLLDVRPPAEFEICQLPRSINVPLSEILDDSYLK--RFAKQLED--K 400
Query: 136 KHDEIIGCQSGKRSMMAATDLLNAVSTHA 164
+ ++ C+ G S +AA + N H+
Sbjct: 401 ELPIVLLCRRGNDSQIAAQHIKNRFPAHS 429
>sp|Q8NFU3|TSTD1_HUMAN Thiosulfate sulfurtransferase/rhodanese-like domain-containing
protein 1 OS=Homo sapiens GN=TSTD1 PE=1 SV=3
Length = 115
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 69 VGVPTSVPVRVAHELLQAGH-RYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFV 127
G PT V + LL +G R DVR+ EE +AG GA+N+P + + F
Sbjct: 2 AGAPT-VSLPELRSLLASGRARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQ 60
Query: 128 EEVSTRFRK-HDE--IIGCQSGKRSMMA 152
S K DE + CQ GKR + A
Sbjct: 61 ALYSAEKPKLEDEHLVFFCQMGKRGLQA 88
>sp|Q0I0D0|SELU_SHESR tRNA 2-selenouridine synthase OS=Shewanella sp. (strain MR-7)
GN=selU PE=3 SV=1
Length = 369
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 75 VPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYM 113
+P + H++ AG +D+R P EF G ++N+P M
Sbjct: 6 IPAQQYHDIFIAGQPLIDLRAPIEFDRGAFPSSVNLPLM 44
>sp|B2AGP0|SELU_CUPTR tRNA 2-selenouridine synthase OS=Cupriavidus taiwanensis (strain R1
/ LMG 19424) GN=selU PE=3 SV=1
Length = 368
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 82 ELLQAGHRYLDVRTPEEFSAGHATGAINVPYM 113
EL +G LDVR P EF+ G GA+N+P M
Sbjct: 10 ELFLSGVAMLDVRAPLEFARGAFPGAVNLPLM 41
>sp|Q5F361|TBCK_CHICK TBC domain-containing protein kinase-like protein OS=Gallus gallus
GN=TBCK PE=2 SV=2
Length = 893
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 18/22 (81%)
Query: 91 LDVRTPEEFSAGHATGAINVPY 112
+D+R E+F+ GH +G+INVP+
Sbjct: 797 VDIRNSEDFNRGHISGSINVPF 818
>sp|Q0HNW2|SELU_SHESM tRNA 2-selenouridine synthase OS=Shewanella sp. (strain MR-4)
GN=selU PE=3 SV=1
Length = 384
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 75 VPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYM 113
+P + H++ AG +D+R P EF G ++N+P M
Sbjct: 6 IPAQQYHDIFVAGKPLIDLRAPIEFDRGAFPSSVNLPLM 44
>sp|Q59WH7|UBA4_CANAL Adenylyltransferase and sulfurtransferase UBA4 OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=UBA4 PE=3 SV=1
Length = 438
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 88 HRYLDVRTPEEFSAGHATGAINVPY--MYRVGSGMTKNLKFVEEVSTRFRKHDEI-IGCQ 144
H +DVR E+F H AINV + +R + +++ + ST K DEI + C+
Sbjct: 344 HILIDVRPREQFQITHLPNAINVQWDPTFRKADAIE---QYLPDDST---KDDEIYVVCR 397
Query: 145 SGKRSMMAATDLL 157
G S +AA L+
Sbjct: 398 FGNDSQLAAKKLI 410
>sp|Q29PG5|MOC32_DROPS Adenylyltransferase and sulfurtransferase MOCS3 2 OS=Drosophila
pseudoobscura pseudoobscura GN=GA12041 PE=3 SV=1
Length = 451
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 77 VRVAHELLQAG-HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFR 135
V+ H+ LQ+ H LDVR P EF +INVP + K +F +++ +
Sbjct: 345 VKEYHQKLQSQPHLLLDVRPPAEFEICQLPRSINVPLSEILDDSYLK--RFAKQLED--K 400
Query: 136 KHDEIIGCQSGKRSMMAATDLLNAVSTHA 164
+ ++ C+ G S +A + N H+
Sbjct: 401 ELPIVLLCRRGNDSQIAVQHITNRFPAHS 429
>sp|B5DS72|MOC31_DROPS Adenylyltransferase and sulfurtransferase MOCS3 1 OS=Drosophila
pseudoobscura pseudoobscura GN=GA24966 PE=3 SV=1
Length = 451
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 77 VRVAHELLQAG-HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFR 135
V+ H+ LQ+ H LDVR P EF +INVP + K +F +++ +
Sbjct: 345 VKEYHQKLQSQPHLLLDVRPPAEFEICQLPRSINVPLSEILDDSYLK--RFAKQLED--K 400
Query: 136 KHDEIIGCQSGKRSMMAATDLLNAVSTHA 164
+ ++ C+ G S +A + N H+
Sbjct: 401 ELPIVLLCRRGNDSQIAVQHITNRFPAHS 429
>sp|P55734|YGAP_ECOLI Inner membrane protein YgaP OS=Escherichia coli (strain K12)
GN=ygaP PE=1 SV=1
Length = 174
Score = 32.0 bits (71), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 13/94 (13%)
Query: 73 TSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVST 132
T++ A EL+ G + +D+R +E+ H A P SG+ L
Sbjct: 4 TTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLSVLEQSGLPAKL-------- 55
Query: 133 RFRKHDEII-GCQSGKRSMMAATDLLNAVSTHAN 165
+H++II CQ+GKR+ A D L A++ A
Sbjct: 56 ---RHEQIIFHCQAGKRTSNNA-DKLAAIAAPAE 85
>sp|Q66KY0|SEL1A_XENLA Sel1 repeat-containing protein 1A OS=Xenopus laevis GN=selrc1-a
PE=2 SV=1
Length = 231
Score = 32.0 bits (71), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 100 SAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFR 135
S GH G N MY++G G+ KN + E + R R
Sbjct: 179 SLGHVWGCANASRMYKLGDGVAKNDEKAESLKNRAR 214
>sp|Q38W66|PYRH_LACSS Uridylate kinase OS=Lactobacillus sakei subsp. sakei (strain 23K)
GN=pyrH PE=3 SV=1
Length = 241
Score = 32.0 bits (71), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 22 VLCPHGNNRRGLL--SLTVDQQRCDNIGFISSKILSFCPKASLRGNLEAVGVPTSVPVRV 79
++C GN RG+ + +++ + D +G +++ + + +L+ NLE++GVPT V +
Sbjct: 50 IVCGGGNIWRGVTGEQMGMERAQADYMGMMATVMNAL----ALQDNLESIGVPTRVQTSI 105
Query: 80 AHELLQAGHRYLDVRTPEEFSAGHAT---GAINVPY 112
E+ Q Y+ + G G PY
Sbjct: 106 --EMRQIAEPYIRRKAVRHLEKGRVVIFAGGTGNPY 139
>sp|O05793|THTR_MYCTU Putative thiosulfate sulfurtransferase OS=Mycobacterium
tuberculosis GN=cysA1 PE=1 SV=1
Length = 277
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 47/119 (39%), Gaps = 44/119 (36%)
Query: 91 LDVRTPEEFSA----------------GHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF 134
+DVR+P+EFS GH GAINVP+ T K EE++ +
Sbjct: 161 IDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGT--FKSDEELAKLY 218
Query: 135 ------RKHDEIIGCQSGKRSMMAATDLLNAVSTHANYPSKPLTWFLSNQLLTEEKLKS 187
+ I C+ G+R S+H TWF+ +LL + +K+
Sbjct: 219 ADAGLDNSKETIAYCRIGER------------SSH--------TWFVLRELLGHQNVKN 257
>sp|P59989|THTR1_MYCBO Putative thiosulfate sulfurtransferase 1 OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=cysA1 PE=3 SV=1
Length = 277
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 47/119 (39%), Gaps = 44/119 (36%)
Query: 91 LDVRTPEEFSA----------------GHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF 134
+DVR+P+EFS GH GAINVP+ T K EE++ +
Sbjct: 161 IDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGT--FKSDEELAKLY 218
Query: 135 ------RKHDEIIGCQSGKRSMMAATDLLNAVSTHANYPSKPLTWFLSNQLLTEEKLKS 187
+ I C+ G+R S+H TWF+ +LL + +K+
Sbjct: 219 ADAGLDNSKETIAYCRIGER------------SSH--------TWFVLRELLGHQNVKN 257
>sp|Q8TEA7|TBCK_HUMAN TBC domain-containing protein kinase-like protein OS=Homo sapiens
GN=TBCK PE=2 SV=4
Length = 893
Score = 31.6 bits (70), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 91 LDVRTPEEFSAGHATGAINVPY 112
+D+R E+F GH +G+IN+P+
Sbjct: 797 VDIRNSEDFIRGHISGSINIPF 818
>sp|A7MJZ3|SELU_CROS8 tRNA 2-selenouridine synthase OS=Cronobacter sakazakii (strain ATCC
BAA-894) GN=selU PE=3 SV=1
Length = 377
Score = 31.6 bits (70), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 91 LDVRTPEEFSAGHATGAINVPYM 113
+DVR P EF+ G GAIN+P M
Sbjct: 25 IDVRAPVEFAQGAMPGAINLPLM 47
>sp|A5DMB6|UBA4_PICGU Adenylyltransferase and sulfurtransferase UBA4 OS=Meyerozyma
guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 /
JCM 1539 / NBRC 10279 / NRRL Y-324) GN=UBA4 PE=3 SV=1
Length = 424
Score = 31.6 bits (70), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 86 AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIGCQS 145
+ H LDVR E+F GA+N+P+ + T N+ ++++ + ++ C+
Sbjct: 328 SDHVLLDVRPKEQFEVSSFPGAVNIPWDSVLSK--TTNIDKIDQLQLPPKSPIYVV-CRY 384
Query: 146 GKRSMMAATDLLN 158
G S +A LL+
Sbjct: 385 GNDSQLATKKLLD 397
>sp|B4T9K6|SELU_SALHS tRNA 2-selenouridine synthase OS=Salmonella heidelberg (strain
SL476) GN=selU PE=3 SV=1
Length = 364
Score = 31.6 bits (70), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 83 LLQAGHRYLDVRTPEEFSAGHATGAINVPYM 113
LL A +DVR P EF G GAIN+P M
Sbjct: 13 LLLADTPLIDVRAPIEFEQGAMPGAINLPLM 43
>sp|B4TMJ2|SELU_SALSV tRNA 2-selenouridine synthase OS=Salmonella schwarzengrund (strain
CVM19633) GN=selU PE=3 SV=1
Length = 361
Score = 31.6 bits (70), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 83 LLQAGHRYLDVRTPEEFSAGHATGAINVPYM 113
LL A +DVR P EF G GAIN+P M
Sbjct: 10 LLLADTPLIDVRAPIEFEQGAMPGAINLPLM 40
>sp|Q9S4Y8|SELU_SALEN tRNA 2-selenouridine synthase OS=Salmonella enteritidis GN=selU
PE=3 SV=1
Length = 364
Score = 31.6 bits (70), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 83 LLQAGHRYLDVRTPEEFSAGHATGAINVPYM 113
LL A +DVR P EF G GAIN+P M
Sbjct: 13 LLLADTPLIDVRAPIEFEQGAMPGAINLPLM 43
>sp|B1KN07|SELU_SHEWM tRNA 2-selenouridine synthase OS=Shewanella woodyi (strain ATCC
51908 / MS32) GN=selU PE=3 SV=1
Length = 368
Score = 31.6 bits (70), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 75 VPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYM 113
+P E++ +GH +DVR P EF G + N P M
Sbjct: 6 IPKTTYQEIMLSGHPMIDVRAPIEFDKGAFPSSSNFPLM 44
>sp|Q8ZR88|SELU_SALTY tRNA 2-selenouridine synthase OS=Salmonella typhimurium (strain LT2
/ SGSC1412 / ATCC 700720) GN=selU PE=1 SV=1
Length = 364
Score = 31.6 bits (70), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 83 LLQAGHRYLDVRTPEEFSAGHATGAINVPYM 113
LL A +DVR P EF G GAIN+P M
Sbjct: 13 LLLADTPLIDVRAPIEFEQGAMPGAINLPLM 43
>sp|C0PVG5|SELU_SALPC tRNA 2-selenouridine synthase OS=Salmonella paratyphi C (strain
RKS4594) GN=selU PE=3 SV=1
Length = 364
Score = 31.6 bits (70), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 83 LLQAGHRYLDVRTPEEFSAGHATGAINVPYM 113
LL A +DVR P EF G GAIN+P M
Sbjct: 13 LLLADTPLIDVRAPIEFEQGAMPGAINLPLM 43
>sp|A9MW55|SELU_SALPB tRNA 2-selenouridine synthase OS=Salmonella paratyphi B (strain
ATCC BAA-1250 / SPB7) GN=selU PE=3 SV=1
Length = 364
Score = 31.6 bits (70), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 83 LLQAGHRYLDVRTPEEFSAGHATGAINVPYM 113
LL A +DVR P EF G GAIN+P M
Sbjct: 13 LLLADTPLIDVRAPIEFEQGAMPGAINLPLM 43
>sp|B4SXL9|SELU_SALNS tRNA 2-selenouridine synthase OS=Salmonella newport (strain SL254)
GN=selU PE=3 SV=1
Length = 364
Score = 31.6 bits (70), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 83 LLQAGHRYLDVRTPEEFSAGHATGAINVPYM 113
LL A +DVR P EF G GAIN+P M
Sbjct: 13 LLLADTPLIDVRAPIEFEQGAMPGAINLPLM 43
>sp|Q57S51|SELU_SALCH tRNA 2-selenouridine synthase OS=Salmonella choleraesuis (strain
SC-B67) GN=selU PE=3 SV=1
Length = 364
Score = 31.6 bits (70), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 83 LLQAGHRYLDVRTPEEFSAGHATGAINVPYM 113
LL A +DVR P EF G GAIN+P M
Sbjct: 13 LLLADTPLIDVRAPIEFEQGAMPGAINLPLM 43
>sp|Q8Z8R4|SELU_SALTI tRNA 2-selenouridine synthase OS=Salmonella typhi GN=selU PE=3 SV=1
Length = 364
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 83 LLQAGHRYLDVRTPEEFSAGHATGAINVPYM 113
LL A +DVR P EF G GAIN+P M
Sbjct: 13 LLLADTPLIDVRAPIEFEQGAMPGAINLPLM 43
>sp|B5QUA2|SELU_SALEP tRNA 2-selenouridine synthase OS=Salmonella enteritidis PT4 (strain
P125109) GN=selU PE=3 SV=1
Length = 364
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 83 LLQAGHRYLDVRTPEEFSAGHATGAINVPYM 113
LL A +DVR P EF G GAIN+P M
Sbjct: 13 LLLADTPLIDVRAPIEFEQGAMPGAINLPLM 43
>sp|B5R637|SELU_SALG2 tRNA 2-selenouridine synthase OS=Salmonella gallinarum (strain
287/91 / NCTC 13346) GN=selU PE=3 SV=1
Length = 364
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 83 LLQAGHRYLDVRTPEEFSAGHATGAINVPYM 113
LL A +DVR P EF G GAIN+P M
Sbjct: 13 LLLADTPLIDVRAPIEFEQGAMPGAINLPLM 43
>sp|B5EYB4|SELU_SALA4 tRNA 2-selenouridine synthase OS=Salmonella agona (strain SL483)
GN=selU PE=3 SV=1
Length = 364
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 83 LLQAGHRYLDVRTPEEFSAGHATGAINVPYM 113
LL A +DVR P EF G GAIN+P M
Sbjct: 13 LLLADTPLIDVRAPIEFEQGAMPGAINLPLM 43
>sp|B5BD19|SELU_SALPK tRNA 2-selenouridine synthase OS=Salmonella paratyphi A (strain
AKU_12601) GN=selU PE=3 SV=1
Length = 364
Score = 31.2 bits (69), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 83 LLQAGHRYLDVRTPEEFSAGHATGAINVPYM 113
LL A +DVR P EF G GAIN+P M
Sbjct: 13 LLLADTPLIDVRAPIEFEQGAMPGAINLPLM 43
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.131 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,489,358
Number of Sequences: 539616
Number of extensions: 2420310
Number of successful extensions: 6352
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 6293
Number of HSP's gapped (non-prelim): 70
length of query: 187
length of database: 191,569,459
effective HSP length: 111
effective length of query: 76
effective length of database: 131,672,083
effective search space: 10007078308
effective search space used: 10007078308
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)