Your job contains 1 sequence.
>029840
MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP
PMSLSRLTKFMKGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL
TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR
NSRGFRV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029840
(187 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2078077 - symbol:RPL18 "ribosomal protein L18"... 843 3.4e-84 1
TAIR|locus:2143330 - symbol:AT5G27850 species:3702 "Arabi... 843 3.4e-84 1
MGI|MGI:98003 - symbol:Rpl18 "ribosomal protein L18" spec... 641 8.8e-63 1
RGD|621182 - symbol:Rpl18 "ribosomal protein L18" species... 640 1.1e-62 1
UNIPROTKB|Q07020 - symbol:RPL18 "60S ribosomal protein L1... 636 3.0e-62 1
UNIPROTKB|D0VWQ3 - symbol:RPL18 "Ribosomal protein L18" s... 635 3.8e-62 1
UNIPROTKB|Q5E973 - symbol:RPL18 "60S ribosomal protein L1... 633 6.2e-62 1
UNIPROTKB|I3L6F1 - symbol:RPL18 "60S ribosomal protein L1... 633 6.2e-62 1
UNIPROTKB|J3QQ67 - symbol:RPL18 "60S ribosomal protein L1... 631 1.0e-61 1
ASPGD|ASPL0000006713 - symbol:AN5800 species:162425 "Emer... 619 1.9e-60 1
FB|FBgn0035753 - symbol:RpL18 "Ribosomal protein L18" spe... 610 1.7e-59 1
ZFIN|ZDB-GENE-040801-165 - symbol:rpl18 "ribosomal protei... 603 9.3e-59 1
UNIPROTKB|Q2M0G4 - symbol:RpL18 "60S ribosomal protein L1... 601 1.5e-58 1
SGD|S000005480 - symbol:RPL18A "Ribosomal 60S subunit pro... 576 6.8e-56 1
SGD|S000005245 - symbol:RPL18B "Ribosomal 60S subunit pro... 576 6.8e-56 1
POMBASE|SPAPB17E12.13 - symbol:rpl1802 "60S ribosomal pro... 573 1.4e-55 1
POMBASE|SPBC11C11.07 - symbol:rpl1801 "60S ribosomal prot... 572 1.8e-55 1
WB|WBGene00004430 - symbol:rpl-18 species:6239 "Caenorhab... 568 4.8e-55 1
UNIPROTKB|F8VWC5 - symbol:RPL18 "60S ribosomal protein L1... 553 1.9e-53 1
GENEDB_PFALCIPARUM|MAL13P1.209 - symbol:MAL13P1.209 "60S ... 550 3.8e-53 1
UNIPROTKB|C0H5G3 - symbol:MAL13P1.209 "60S ribosomal prot... 550 3.8e-53 1
UNIPROTKB|H0YHA7 - symbol:RPL18 "60S ribosomal protein L1... 543 2.1e-52 1
UNIPROTKB|G3V203 - symbol:RPL18 "60S ribosomal protein L1... 532 3.1e-51 1
UNIPROTKB|D4AD69 - symbol:D4AD69 "Uncharacterized protein... 507 1.4e-48 1
UNIPROTKB|I3LFL4 - symbol:RPL18 "60S ribosomal protein L1... 488 1.4e-46 1
DICTYBASE|DDB_G0279997 - symbol:rpl18 "S60 ribosomal prot... 480 1.0e-45 1
UNIPROTKB|F8VYV2 - symbol:RPL18 "60S ribosomal protein L1... 320 9.6e-44 2
UNIPROTKB|F8VUA6 - symbol:RPL18 "60S ribosomal protein L1... 450 1.5e-42 1
UNIPROTKB|Q95342 - symbol:RPL18 "60S ribosomal protein L1... 321 7.1e-29 1
>TAIR|locus:2078077 [details] [associations]
symbol:RPL18 "ribosomal protein L18" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS;TAS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS;TAS] [GO:0015934 "large ribosomal subunit"
evidence=ISS;IDA;TAS] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005794 "Golgi
apparatus" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR000039
PROSITE:PS01106 Pfam:PF00828 GO:GO:0005886 GO:GO:0005774
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006412
GO:GO:0003735 EMBL:AC011620 GO:GO:0022625 InterPro:IPR021131
SUPFAM:SSF52080 EMBL:U15741 EMBL:AY037224 EMBL:AY060533
IPI:IPI00528143 RefSeq:NP_187210.1 UniGene:At.12935
UniGene:At.24595 UniGene:At.460 ProteinModelPortal:P42791
SMR:P42791 STRING:P42791 PaxDb:P42791 PRIDE:P42791
EnsemblPlants:AT3G05590.1 GeneID:819725 KEGG:ath:AT3G05590
TAIR:At3g05590 eggNOG:COG1727 HOGENOM:HOG000213425
InParanoid:P42791 KO:K02883 OMA:KVRRTEP PhylomeDB:P42791
ProtClustDB:CLSN2684491 Genevestigator:P42791 GermOnline:AT3G05590
PANTHER:PTHR10934 Uniprot:P42791
Length = 187
Score = 843 (301.8 bits), Expect = 3.4e-84, P = 3.4e-84
Identities = 161/187 (86%), Positives = 179/187 (95%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGIDLIAGGKSKK+KRTAPKS+D+YLKL VKLYRFLVRRT+S F+ VILKRLFMSKVNK
Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 60
Query: 61 PMSLSRLTKFMKGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
P+SLSRL +FM GKEDKIAV+VGT+TDD+RV+E+PA+KVTALRFTE ARARIEKAGGECL
Sbjct: 61 PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120
Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
TFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVR+KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 180
Query: 181 NSRGFRV 187
SRGF+V
Sbjct: 181 KSRGFKV 187
>TAIR|locus:2143330 [details] [associations]
symbol:AT5G27850 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0015934 "large ribosomal
subunit" evidence=ISS] [GO:0005773 "vacuole" evidence=IDA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=RCA] InterPro:IPR000039 Pfam:PF00828
GO:GO:0009506 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005773
GO:GO:0016020 GO:GO:0006412 GO:GO:0003735 GO:GO:0022625
EMBL:AC007399 InterPro:IPR021131 SUPFAM:SSF52080 UniGene:At.24595
UniGene:At.460 eggNOG:COG1727 HOGENOM:HOG000213425 KO:K02883
ProtClustDB:CLSN2684491 PANTHER:PTHR10934 EMBL:AY056141
EMBL:AY122996 EMBL:BT000711 IPI:IPI00532781 RefSeq:NP_198137.1
ProteinModelPortal:Q940B0 SMR:Q940B0 IntAct:Q940B0 STRING:Q940B0
PaxDb:Q940B0 PRIDE:Q940B0 EnsemblPlants:AT5G27850.1 GeneID:832848
KEGG:ath:AT5G27850 TAIR:At5g27850 InParanoid:Q940B0 OMA:ARARIIN
PhylomeDB:Q940B0 Genevestigator:Q940B0 GermOnline:AT5G27850
Uniprot:Q940B0
Length = 187
Score = 843 (301.8 bits), Expect = 3.4e-84, P = 3.4e-84
Identities = 161/187 (86%), Positives = 180/187 (96%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGIDLIAGGKSKK+KRTAPKS+D+YLKLLVKLYRFLVRR++SNF+ VILKRLFMSKVNK
Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 60
Query: 61 PMSLSRLTKFMKGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
P+SLSRL +FM GK+DKIAV+VGT+TDD+RV+E+PA+KVTALRFTE ARARIEKAGGECL
Sbjct: 61 PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120
Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
TFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHS+TKPYVR KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKR 180
Query: 181 NSRGFRV 187
SRGF+V
Sbjct: 181 KSRGFKV 187
>MGI|MGI:98003 [details] [associations]
symbol:Rpl18 "ribosomal protein L18" species:10090 "Mus
musculus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000039
InterPro:IPR021132 PROSITE:PS01106 MGI:MGI:98003 Pfam:PF00828
GO:GO:0006412 GO:GO:0003735 GO:GO:0022625 InterPro:IPR021131
SUPFAM:SSF52080 eggNOG:COG1727 HOGENOM:HOG000213425 KO:K02883
OMA:KVRRTEP PANTHER:PTHR10934 CTD:6141 HOVERGEN:HBG000875
OrthoDB:EOG4HHP3F EMBL:L04128 EMBL:AK007263 EMBL:AK009044
EMBL:AK010510 EMBL:AK012580 EMBL:BC082290 IPI:IPI00555113
PIR:JN0779 RefSeq:NP_033103.2 UniGene:Mm.3459 UniGene:Mm.422997
ProteinModelPortal:P35980 SMR:P35980 STRING:P35980
PhosphoSite:P35980 PaxDb:P35980 PRIDE:P35980
Ensembl:ENSMUST00000072503 Ensembl:ENSMUST00000075178 GeneID:19899
KEGG:mmu:19899 InParanoid:P35980 NextBio:297433 Bgee:P35980
CleanEx:MM_RPL18 Genevestigator:P35980
GermOnline:ENSMUSG00000059070 Uniprot:P35980
Length = 188
Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
Identities = 125/188 (66%), Positives = 152/188 (80%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MG+D I K +K +R PKS DIYL+LLVKLYRFL RRT+S F++V+LKRLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+SLSR+ + MK G+E+K AVVVGTVTDD+R+ EVP LKV ALR + AR+RI KAGG+
Sbjct: 60 PLSLSRMIRKMKLPGRENKTAVVVGTVTDDVRILEVPKLKVCALRVSSRARSRILKAGGK 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG 178
LTFDQLAL +P G+ TVLL GP+ RE +HFG APG PHSHTKPYVRSKGRKFERARG
Sbjct: 120 ILTFDQLALESPKGRGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARG 179
Query: 179 KRNSRGFR 186
+R SRG++
Sbjct: 180 RRASRGYK 187
>RGD|621182 [details] [associations]
symbol:Rpl18 "ribosomal protein L18" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] InterPro:IPR000039 InterPro:IPR021132
PROSITE:PS01106 RGD:621182 Pfam:PF00828 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR021131 SUPFAM:SSF52080 eggNOG:COG1727
HOGENOM:HOG000213425 KO:K02883 PANTHER:PTHR10934
GeneTree:ENSGT00390000012976 CTD:6141 HOVERGEN:HBG000875
OrthoDB:EOG4HHP3F EMBL:M20156 EMBL:BC084727 IPI:IPI00230917
PIR:A29906 RefSeq:NP_112364.1 UniGene:Rn.484
ProteinModelPortal:P12001 SMR:P12001 IntAct:P12001 STRING:P12001
PRIDE:P12001 Ensembl:ENSRNOT00000028555 GeneID:81766 KEGG:rno:81766
UCSC:RGD:621182 InParanoid:P12001 NextBio:615566
ArrayExpress:P12001 Genevestigator:P12001
GermOnline:ENSRNOG00000021035 Uniprot:P12001
Length = 188
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 124/188 (65%), Positives = 152/188 (80%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MG+D I K +K +R PKS DIYL+LLVKLYRFL RRT+S F++V+LKRLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+SLSR+ + MK G+E+K AVVVGT+TDD+R+ EVP LKV ALR + AR+RI KAGG+
Sbjct: 60 PLSLSRMIRKMKLPGRENKTAVVVGTITDDVRILEVPKLKVCALRVSSRARSRILKAGGK 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG 178
LTFDQLAL +P G+ TVLL GP+ RE +HFG APG PHSHTKPYVRSKGRKFERARG
Sbjct: 120 ILTFDQLALESPKGRGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARG 179
Query: 179 KRNSRGFR 186
+R SRG++
Sbjct: 180 RRASRGYK 187
>UNIPROTKB|Q07020 [details] [associations]
symbol:RPL18 "60S ribosomal protein L18" species:9606 "Homo
sapiens" [GO:0006412 "translation" evidence=NAS;TAS] [GO:0003735
"structural constituent of ribosome" evidence=NAS] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA] [GO:0003723 "RNA
binding" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006413 "translational
initiation" evidence=TAS] [GO:0006414 "translational elongation"
evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000039 InterPro:IPR021132 PROSITE:PS01106 Pfam:PF00828
Reactome:REACT_116125 GO:GO:0000184 GO:GO:0006413 GO:GO:0003723
GO:GO:0003735 GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0022625 GO:GO:0019083 InterPro:IPR021131
SUPFAM:SSF52080 eggNOG:COG1727 HOGENOM:HOG000213425 KO:K02883
PANTHER:PTHR10934 CTD:6141 HOVERGEN:HBG000875 OrthoDB:EOG4HHP3F
ChiTaRS:RPL18 EMBL:L11566 EMBL:AB061825 EMBL:BC000374 EMBL:BC009708
EMBL:BC021743 IPI:IPI00215719 PIR:S38352 RefSeq:NP_000970.1
UniGene:Hs.515517 ProteinModelPortal:Q07020 SMR:Q07020
IntAct:Q07020 MINT:MINT-5000047 STRING:Q07020 PhosphoSite:Q07020
DMDM:548749 SWISS-2DPAGE:Q07020 PaxDb:Q07020 PeptideAtlas:Q07020
PRIDE:Q07020 DNASU:6141 Ensembl:ENST00000549920 GeneID:6141
KEGG:hsa:6141 UCSC:uc002pjq.1 GeneCards:GC19M049118
H-InvDB:HIX0018528 HGNC:HGNC:10310 HPA:HPA046572 MIM:604179
neXtProt:NX_Q07020 PharmGKB:PA34679 InParanoid:Q07020
GenomeRNAi:6141 NextBio:23857 ArrayExpress:Q07020 Bgee:Q07020
CleanEx:HS_RPL18 Genevestigator:Q07020 Uniprot:Q07020
Length = 188
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 125/188 (66%), Positives = 151/188 (80%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MG+D I K +K +R PKS DIYL+LLVKLYRFL RRT+S F++V+LKRLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+SLSR+ + MK G+E+K AVVVGT+TDD+RV EVP LKV ALR T AR+RI +AGG+
Sbjct: 60 PLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGK 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG 178
LTFDQLAL +P G TVLL GP+ RE +HFG APG PHSHTKPYVRSKGRKFERARG
Sbjct: 120 ILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARG 179
Query: 179 KRNSRGFR 186
+R SRG++
Sbjct: 180 RRASRGYK 187
>UNIPROTKB|D0VWQ3 [details] [associations]
symbol:RPL18 "Ribosomal protein L18" species:9615 "Canis
lupus familiaris" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR000039 InterPro:IPR021132 PROSITE:PS01106 Pfam:PF00828
GO:GO:0006412 GO:GO:0003735 GO:GO:0022625 InterPro:IPR021131
SUPFAM:SSF52080 PDB:2ZKR PDBsum:2ZKR eggNOG:COG1727 KO:K02883
OMA:KVRRTEP PANTHER:PTHR10934 GeneTree:ENSGT00390000012976 CTD:6141
HOVERGEN:HBG000875 EMBL:DQ403035 RefSeq:NP_001238887.1
UniGene:Cfa.40175 STRING:D0VWQ3 Ensembl:ENSCAFT00000006369
GeneID:476422 KEGG:cfa:476422 EvolutionaryTrace:D0VWQ3
Uniprot:D0VWQ3
Length = 188
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 125/188 (66%), Positives = 151/188 (80%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MG+D I K +K +R PKS DIYL+LLVKLYRFL RRT+S F++V+LKRLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+SLSR+ + MK G+E+K AVVVGT+TDD+RV EVP LKV ALR + AR+RI KAGG+
Sbjct: 60 PLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVSSRARSRILKAGGK 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG 178
LTFDQLAL +P G TVLL GP+ RE +HFG APG PHSHTKPYVRSKGRKFERARG
Sbjct: 120 ILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARG 179
Query: 179 KRNSRGFR 186
+R SRG++
Sbjct: 180 RRASRGYK 187
>UNIPROTKB|Q5E973 [details] [associations]
symbol:RPL18 "60S ribosomal protein L18" species:9913 "Bos
taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR000039 InterPro:IPR021132 PROSITE:PS01106 Pfam:PF00828
GO:GO:0006412 GO:GO:0003735 GO:GO:0022625 InterPro:IPR021131
SUPFAM:SSF52080 eggNOG:COG1727 HOGENOM:HOG000213425 KO:K02883
OMA:KVRRTEP PANTHER:PTHR10934 GeneTree:ENSGT00390000012976
EMBL:BT021047 EMBL:BC104507 IPI:IPI00718379 RefSeq:NP_001015556.1
UniGene:Bt.4842 ProteinModelPortal:Q5E973 SMR:Q5E973 STRING:Q5E973
PRIDE:Q5E973 Ensembl:ENSBTAT00000020452 GeneID:509163
KEGG:bta:509163 CTD:6141 HOVERGEN:HBG000875 InParanoid:Q5E973
OrthoDB:EOG4HHP3F NextBio:20868852 Uniprot:Q5E973
Length = 188
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 125/188 (66%), Positives = 150/188 (79%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MG+D I K +K +R PKS DIYL+LLVKLYRFL RRT+S F++V+LKRLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+SLSR+ + MK G+E K AVVVGT+TDD+RV EVP LKV ALR + AR+RI KAGG+
Sbjct: 60 PLSLSRMIRKMKLPGREGKTAVVVGTITDDVRVQEVPKLKVCALRVSSRARSRILKAGGK 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG 178
LTFDQLAL +P G TVLL GP+ RE +HFG APG PHSHTKPYVRSKGRKFERARG
Sbjct: 120 ILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARG 179
Query: 179 KRNSRGFR 186
+R SRG++
Sbjct: 180 RRASRGYK 187
>UNIPROTKB|I3L6F1 [details] [associations]
symbol:RPL18 "60S ribosomal protein L18" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000039 InterPro:IPR021132
PROSITE:PS01106 Pfam:PF00828 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR021131 SUPFAM:SSF52080 KO:K02883
OMA:KVRRTEP PANTHER:PTHR10934 GeneTree:ENSGT00390000012976 CTD:6141
EMBL:FQ073836 RefSeq:XP_003356018.1 RefSeq:XP_003356019.1
ProteinModelPortal:I3L6F1 SMR:I3L6F1 PRIDE:I3L6F1
Ensembl:ENSSSCT00000027696 GeneID:751868 KEGG:ssc:751868
Uniprot:I3L6F1
Length = 188
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 125/188 (66%), Positives = 150/188 (79%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MG+D I K +K +R PKS DIYL+LLVKLYRFL RRT+S F++V+LKRLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+SLSR+ + MK G+E K AVVVGT+TDD+RV EVP LKV ALR + AR+RI KAGG+
Sbjct: 60 PLSLSRMIRKMKLPGREGKTAVVVGTITDDVRVQEVPKLKVCALRVSSRARSRILKAGGK 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG 178
LTFDQLAL +P G TVLL GP+ RE +HFG APG PHSHTKPYVRSKGRKFERARG
Sbjct: 120 ILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARG 179
Query: 179 KRNSRGFR 186
+R SRG++
Sbjct: 180 RRASRGYK 187
>UNIPROTKB|J3QQ67 [details] [associations]
symbol:RPL18 "60S ribosomal protein L18" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000039 InterPro:IPR021132
PROSITE:PS01106 Pfam:PF00828 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR021131 SUPFAM:SSF52080 OMA:KVRRTEP
PANTHER:PTHR10934 ChiTaRS:RPL18 HGNC:HGNC:10310 EMBL:AC022154
Ensembl:ENST00000084795 Uniprot:J3QQ67
Length = 190
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 124/187 (66%), Positives = 150/187 (80%)
Query: 2 GIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPP 61
G+D I K +K +R PKS DIYL+LLVKLYRFL RRT+S F++V+LKRLFMS+ N+PP
Sbjct: 4 GVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 62
Query: 62 MSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGEC 119
+SLSR+ + MK G+E+K AVVVGT+TDD+RV EVP LKV ALR T AR+RI +AGG+
Sbjct: 63 LSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKI 122
Query: 120 LTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGK 179
LTFDQLAL +P G TVLL GP+ RE +HFG APG PHSHTKPYVRSKGRKFERARG+
Sbjct: 123 LTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGR 182
Query: 180 RNSRGFR 186
R SRG++
Sbjct: 183 RASRGYK 189
>ASPGD|ASPL0000006713 [details] [associations]
symbol:AN5800 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR000039 InterPro:IPR021132 PROSITE:PS01106 Pfam:PF00828
GO:GO:0006412 GO:GO:0005840 EMBL:BN001301 GO:GO:0003735
EMBL:AACD01000100 InterPro:IPR021131 SUPFAM:SSF52080 eggNOG:COG1727
HOGENOM:HOG000213425 KO:K02883 PANTHER:PTHR10934 OMA:ARARIIN
OrthoDB:EOG405W9J RefSeq:XP_663404.1 ProteinModelPortal:Q5B0Y0
SMR:Q5B0Y0 STRING:Q5B0Y0 EnsemblFungi:CADANIAT00007248
GeneID:2870950 KEGG:ani:AN5800.2 Uniprot:Q5B0Y0
Length = 184
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 126/188 (67%), Positives = 149/188 (79%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGIDL + + R APKS ++YL++LVKLYRFL RRT+SNF+KV+L+RLFMS++N+P
Sbjct: 1 MGIDLDRH-HVRSTHRKAPKSENVYLQVLVKLYRFLARRTESNFNKVVLRRLFMSRINRP 59
Query: 61 PMSLSRL-TKFMKGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGEC 119
P+SLSR+ + + + K VV+GTVTDD R+ VP L V ALRFT TARARIEKAGGE
Sbjct: 60 PVSLSRIASNVTESHQGKTIVVIGTVTDDNRLLTVPKLSVAALRFTATARARIEKAGGET 119
Query: 120 LTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGK 179
LT DQLALRAP G NT+LLRGPKNAREAVKHFG P H H KPYVRSKGRKFERARG+
Sbjct: 120 LTLDQLALRAPTGANTLLLRGPKNAREAVKHFGFGP---HKHKKPYVRSKGRKFERARGR 176
Query: 180 RNSRGFRV 187
R SRGF+V
Sbjct: 177 RRSRGFKV 184
>FB|FBgn0035753 [details] [associations]
symbol:RpL18 "Ribosomal protein L18" species:7227 "Drosophila
melanogaster" [GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0005840
"ribosome" evidence=IDA] [GO:0000022 "mitotic spindle elongation"
evidence=IMP] [GO:0007052 "mitotic spindle organization"
evidence=IMP] InterPro:IPR000039 InterPro:IPR021132 PROSITE:PS01106
Pfam:PF00828 EMBL:AE014296 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0000022 InterPro:IPR021131 SUPFAM:SSF52080
eggNOG:COG1727 KO:K02883 OMA:KVRRTEP PANTHER:PTHR10934
GeneTree:ENSGT00390000012976 CTD:6141 EMBL:AY113554 EMBL:BT030448
RefSeq:NP_648091.1 UniGene:Dm.7265 UniGene:Dm.7423
ProteinModelPortal:Q9VS34 SMR:Q9VS34 IntAct:Q9VS34 MINT:MINT-856295
STRING:Q9VS34 PaxDb:Q9VS34 PRIDE:Q9VS34 EnsemblMetazoa:FBtr0076892
EnsemblMetazoa:FBtr0333370 GeneID:38794 KEGG:dme:Dmel_CG8615
FlyBase:FBgn0035753 InParanoid:Q9VS34 OrthoDB:EOG4TB2TJ
PhylomeDB:Q9VS34 ChiTaRS:RPL18 GenomeRNAi:38794 NextBio:810409
Bgee:Q9VS34 Uniprot:Q9VS34
Length = 188
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 121/188 (64%), Positives = 148/188 (78%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGID I +K +RT PKS D+YL+LLVKLYRFL RRT+ F+++ILKRLFMSK+N+P
Sbjct: 1 MGID-INHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRP 59
Query: 61 PMSLSRLTKFMKG--KEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+SL R+ +F K + + VVVGTVTDD R+ VP L V AL T+TAR RI KAGGE
Sbjct: 60 PLSLQRIARFFKAANQPESTIVVVGTVTDDARLLVVPKLTVCALHVTQTARERILKAGGE 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG 178
LTFDQLALR+P G+NT+LL+G + AR A KHFG APGVPHSHT+PYVRSKGRKFERARG
Sbjct: 120 VLTFDQLALRSPTGKNTLLLQGRRTARTACKHFGKAPGVPHSHTRPYVRSKGRKFERARG 179
Query: 179 KRNSRGFR 186
+R+S G++
Sbjct: 180 RRSSCGYK 187
>ZFIN|ZDB-GENE-040801-165 [details] [associations]
symbol:rpl18 "ribosomal protein L18" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000039 InterPro:IPR021132 PROSITE:PS01106 Pfam:PF00828
ZFIN:ZDB-GENE-040801-165 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR021131 SUPFAM:SSF52080 eggNOG:COG1727
HOGENOM:HOG000213425 KO:K02883 OMA:KVRRTEP PANTHER:PTHR10934
GeneTree:ENSGT00390000012976 CTD:6141 HOVERGEN:HBG000875
OrthoDB:EOG4HHP3F EMBL:CR533575 EMBL:AL929505 EMBL:BC076332
IPI:IPI00493625 RefSeq:NP_001003432.1 UniGene:Dr.76043 SMR:Q6DGL0
STRING:Q6DGL0 Ensembl:ENSDART00000043173 GeneID:445038
KEGG:dre:445038 InParanoid:Q6DGL0 NextBio:20831800 Uniprot:Q6DGL0
Length = 182
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 117/183 (63%), Positives = 146/183 (79%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MG+D I K +K R PKS DIYL+LLVKLYRFL RR+D+ F+KVIL+RLFMSK N+P
Sbjct: 1 MGVD-IRHNKDRKVHRKEPKSQDIYLRLLVKLYRFLSRRSDAPFNKVILRRLFMSKTNRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P++LSRL + MK G+E+ AVVVGT+TDD+R+ +P LKV AL+ T+ AR+RI KAGG+
Sbjct: 60 PLALSRLIRKMKLPGRENLTAVVVGTITDDVRIQNIPKLKVCALKVTDRARSRILKAGGQ 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG 178
+TFDQLAL +P G+ TVLL GP+ R+ +HFG APG PHSHTKPYVRSKGRKFERARG
Sbjct: 120 IMTFDQLALTSPRGRGTVLLSGPRKGRQVYRHFGKAPGTPHSHTKPYVRSKGRKFERARG 179
Query: 179 KRN 181
+R+
Sbjct: 180 RRH 182
>UNIPROTKB|Q2M0G4 [details] [associations]
symbol:RpL18 "60S ribosomal protein L18" species:46245
"Drosophila pseudoobscura pseudoobscura" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000039 InterPro:IPR021132 PROSITE:PS01106 Pfam:PF00828
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CH379069
InterPro:IPR021131 SUPFAM:SSF52080 eggNOG:COG1727 KO:K02883
PANTHER:PTHR10934 OrthoDB:EOG4TB2TJ RefSeq:XP_001353459.2
GeneID:4813449 KEGG:dpo:Dpse_GA21210 FlyBase:FBgn0081198
InParanoid:Q2M0G4 Uniprot:Q2M0G4
Length = 189
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 118/187 (63%), Positives = 147/187 (78%)
Query: 2 GIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPP 61
GID I +K +RT PKS D+YL+LLVKLYRFL RRT+ F+++ILKRLFMSK+N+PP
Sbjct: 3 GID-INHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPP 61
Query: 62 MSLSRLTKFMKG--KEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGEC 119
+SL R+ +F K + + VVVGTVTDD R+ VP L + AL T+TAR RI KAGGE
Sbjct: 62 LSLQRIARFFKAANQPESTVVVVGTVTDDARLLVVPKLTLCALHVTQTARERILKAGGEV 121
Query: 120 LTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGK 179
LTFDQLAL++P G+NT+LL+G + AR A KHFG APGVPHSHT+PYVRSKGRKFERARG+
Sbjct: 122 LTFDQLALKSPTGKNTLLLQGKRTARTACKHFGKAPGVPHSHTRPYVRSKGRKFERARGR 181
Query: 180 RNSRGFR 186
R+S G++
Sbjct: 182 RSSCGYK 188
>SGD|S000005480 [details] [associations]
symbol:RPL18A "Ribosomal 60S subunit protein L18A"
species:4932 "Saccharomyces cerevisiae" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=TAS] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;TAS] [GO:0002181 "cytoplasmic translation"
evidence=TAS] [GO:0005840 "ribosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR000039 InterPro:IPR021132 PROSITE:PS01106
SGD:S000005480 Pfam:PF00828 EMBL:BK006948 GO:GO:0003735
GO:GO:0002181 GO:GO:0022625 EMBL:X95258 InterPro:IPR021131
SUPFAM:SSF52080 PDB:1K5Y PDB:1S1I PDB:3IZS PDB:3O58 PDB:3O5H
PDB:3U5E PDB:3U5I PDBsum:1K5Y PDBsum:1S1I PDBsum:3IZS PDBsum:3O58
PDBsum:3O5H PDBsum:3U5E PDBsum:3U5I KO:K02883 PANTHER:PTHR10934
EMBL:X01099 EMBL:X02635 EMBL:Z74862 PIR:S05867 RefSeq:NP_014098.1
RefSeq:NP_014521.1 ProteinModelPortal:P0CX49 SMR:P0CX49
EnsemblFungi:YNL301C EnsemblFungi:YOL120C GeneID:854029
GeneID:855415 KEGG:sce:YNL301C KEGG:sce:YOL120C CYGD:YOL120c
EvolutionaryTrace:P0CX49 NextBio:975577 ArrayExpress:P0CX49
GermOnline:YOL120C Uniprot:P0CX49
Length = 186
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 113/189 (59%), Positives = 144/189 (76%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGID + + RTAPKS+++YLKLLVKLY FL RRTD+ F+KV+LK LF+SK+N+P
Sbjct: 1 MGIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRP 60
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+S+SR+ + +K G +K VVVGTVTDD R++E P V ALRFT ARA+I KAGGE
Sbjct: 61 PVSVSRIARALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGE 120
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG 178
C+T DQLA+RAP GQNT++LRGP+N+REAV+HFG P H P + S GRKFERARG
Sbjct: 121 CITLDQLAVRAPKGQNTLILRGPRNSREAVRHFGMGP---HKGKAPRILSTGRKFERARG 177
Query: 179 KRNSRGFRV 187
+R S+GF+V
Sbjct: 178 RRRSKGFKV 186
>SGD|S000005245 [details] [associations]
symbol:RPL18B "Ribosomal 60S subunit protein L18B"
species:4932 "Saccharomyces cerevisiae" [GO:0003735 "structural
constituent of ribosome" evidence=IEA;TAS] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=TAS] [GO:0005840 "ribosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0002181 "cytoplasmic translation"
evidence=TAS] [GO:0006412 "translation" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000039
InterPro:IPR021132 PROSITE:PS01106 SGD:S000005245 Pfam:PF00828
EMBL:BK006947 GO:GO:0003735 GO:GO:0002181 PDB:4B6A PDBsum:4B6A
EMBL:U23084 GO:GO:0022625 InterPro:IPR021131 SUPFAM:SSF52080
KO:K02883 PANTHER:PTHR10934 PIR:S05867 RefSeq:NP_014098.1
RefSeq:NP_014521.1 EnsemblFungi:YNL301C EnsemblFungi:YOL120C
GeneID:854029 GeneID:855415 KEGG:sce:YNL301C KEGG:sce:YOL120C
NextBio:975577 EMBL:X01100 EMBL:Z71577 ProteinModelPortal:P0CX50
SMR:P0CX50 CYGD:YNL301c GeneTree:ENSGT00390000012976
ArrayExpress:P0CX50 GermOnline:YNL301C Uniprot:P0CX50
Length = 186
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 113/189 (59%), Positives = 144/189 (76%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGID + + RTAPKS+++YLKLLVKLY FL RRTD+ F+KV+LK LF+SK+N+P
Sbjct: 1 MGIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRP 60
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+S+SR+ + +K G +K VVVGTVTDD R++E P V ALRFT ARA+I KAGGE
Sbjct: 61 PVSVSRIARALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGE 120
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG 178
C+T DQLA+RAP GQNT++LRGP+N+REAV+HFG P H P + S GRKFERARG
Sbjct: 121 CITLDQLAVRAPKGQNTLILRGPRNSREAVRHFGMGP---HKGKAPRILSTGRKFERARG 177
Query: 179 KRNSRGFRV 187
+R S+GF+V
Sbjct: 178 RRRSKGFKV 186
>POMBASE|SPAPB17E12.13 [details] [associations]
symbol:rpl1802 "60S ribosomal protein L18 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] InterPro:IPR000039
InterPro:IPR021132 PROSITE:PS01106 PomBase:SPAPB17E12.13
Pfam:PF00828 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003735
GO:GO:0002181 GO:GO:0022625 InterPro:IPR021131 SUPFAM:SSF52080
eggNOG:COG1727 HOGENOM:HOG000213425 PANTHER:PTHR10934 OMA:ARARIIN
OrthoDB:EOG405W9J RefSeq:NP_001018228.1 ProteinModelPortal:Q8TFH1
SMR:Q8TFH1 IntAct:Q8TFH1 STRING:Q8TFH1 EnsemblFungi:SPAPB17E12.13.1
GeneID:3361377 KEGG:spo:SPAPB17E12.13 NextBio:20811427
Uniprot:Q8TFH1
Length = 187
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 121/191 (63%), Positives = 141/191 (73%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGID I +KS+R+ P S ++YLKLLVKLYRFL RRTDS F+K ILKRLF SK N+P
Sbjct: 1 MGID-IERHHVRKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRP 59
Query: 61 PMSLSRLTKFMKGK----EDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAG 116
P+S+S++ K E K V+VGTVTDD R+ VP L V ALRFT++ARARI KAG
Sbjct: 60 PISISKIAALTSRKSASLEGKTTVIVGTVTDDERLLTVPKLSVAALRFTKSARARILKAG 119
Query: 117 GECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERA 176
GE LT DQLALRAP G NTVLLRG K+AREA +HFG P H H PYVRS+GRKFERA
Sbjct: 120 GEVLTLDQLALRAPTGSNTVLLRGKKHAREAYRHFGFGP---HKHKAPYVRSEGRKFERA 176
Query: 177 RGKRNSRGFRV 187
RG+R SR F+V
Sbjct: 177 RGRRKSRAFKV 187
>POMBASE|SPBC11C11.07 [details] [associations]
symbol:rpl1801 "60S ribosomal protein L18" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006412
"translation" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] InterPro:IPR000039 InterPro:IPR021132
PROSITE:PS01106 PomBase:SPBC11C11.07 Pfam:PF00828 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181 GO:GO:0022625
InterPro:IPR021131 SUPFAM:SSF52080 HOGENOM:HOG000213425 KO:K02883
PANTHER:PTHR10934 PIR:T39323 RefSeq:NP_596397.1
ProteinModelPortal:Q10192 SMR:Q10192 MINT:MINT-4697656
STRING:Q10192 PRIDE:Q10192 EnsemblFungi:SPBC11C11.07.1
GeneID:2539678 KEGG:spo:SPBC11C11.07 OMA:FMEGKEN OrthoDB:EOG405W9J
NextBio:20800832 Uniprot:Q10192
Length = 187
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 120/191 (62%), Positives = 142/191 (74%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGID I KKS+R+ P S ++YLKLLVKLYRFL RRTDS F+K ILKRLF SK N+P
Sbjct: 1 MGID-IERHHVKKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRP 59
Query: 61 PMSLSRLTKFMKGK----EDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAG 116
P+S+S++ K ++K VVVGTVTDD R+ VP L + ALRFT++ARARI KAG
Sbjct: 60 PISISKIAALTSRKSASSQNKTTVVVGTVTDDERMLTVPKLSIAALRFTKSARARILKAG 119
Query: 117 GECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERA 176
GE LT DQLALRAP G NTVL+RG K+AREA +HFG P H H PYVRS+GRKFERA
Sbjct: 120 GEVLTLDQLALRAPTGSNTVLVRGKKHAREAYRHFGFGP---HKHKAPYVRSEGRKFERA 176
Query: 177 RGKRNSRGFRV 187
RG+R SR F+V
Sbjct: 177 RGRRKSRAFKV 187
>WB|WBGene00004430 [details] [associations]
symbol:rpl-18 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR000039 PROSITE:PS01106 Pfam:PF00828 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0006915 GO:GO:0002119
GO:GO:0006412 GO:GO:0018996 GO:GO:0000003 GO:GO:0005840
GO:GO:0003735 EMBL:AL021492 InterPro:IPR021131 SUPFAM:SSF52080
eggNOG:COG1727 HOGENOM:HOG000213425 KO:K02883 PANTHER:PTHR10934
OMA:FMEGKEN GeneTree:ENSGT00390000012976 PIR:T26939
RefSeq:NP_502655.1 ProteinModelPortal:O45946 SMR:O45946
DIP:DIP-25467N MINT:MINT-1068012 STRING:O45946 PaxDb:O45946
EnsemblMetazoa:Y45F10D.12.1 EnsemblMetazoa:Y45F10D.12.2
EnsemblMetazoa:Y45F10D.12.3 GeneID:178342 KEGG:cel:CELE_Y45F10D.12
UCSC:Y45F10D.12.1 CTD:178342 WormBase:Y45F10D.12 InParanoid:O45946
NextBio:900736 Uniprot:O45946
Length = 188
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 113/188 (60%), Positives = 143/188 (76%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGID I + ++RTAPKS + YL+LL KLY FL RRT F+ ++LKRL MS+ N+
Sbjct: 1 MGID-INHKHDRVARRTAPKSENPYLRLLSKLYAFLARRTGEKFNAIVLKRLRMSRRNRQ 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+SL++L + ++ G E+K V + TVTDD R+Y VP + V AL TE ARARI AGGE
Sbjct: 60 PLSLAKLARAVQKAGNENKTVVTLSTVTDDARLYTVPKISVAALHVTEGARARILAAGGE 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG 178
+T DQLAL++P G+NTV L+GP++AREA KHFGPAPGVPHSHTKPYVRSKGRKFERARG
Sbjct: 120 IITLDQLALKSPKGENTVFLQGPRSAREAEKHFGPAPGVPHSHTKPYVRSKGRKFERARG 179
Query: 179 KRNSRGFR 186
+R SR ++
Sbjct: 180 RRASRAYK 187
>UNIPROTKB|F8VWC5 [details] [associations]
symbol:RPL18 "60S ribosomal protein L18" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000039 InterPro:IPR021132
PROSITE:PS01106 Pfam:PF00828 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR021131 SUPFAM:SSF52080 KO:K02883
PANTHER:PTHR10934 CTD:6141 ChiTaRS:RPL18 UniGene:Hs.515517
GeneID:6141 KEGG:hsa:6141 HGNC:HGNC:10310 EMBL:AC022154
IPI:IPI01021193 RefSeq:NP_001257419.1 ProteinModelPortal:F8VWC5
SMR:F8VWC5 PRIDE:F8VWC5 Ensembl:ENST00000552588 ArrayExpress:F8VWC5
Bgee:F8VWC5 Uniprot:F8VWC5
Length = 159
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 107/157 (68%), Positives = 129/157 (82%)
Query: 32 LYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMK--GKEDKIAVVVGTVTDDI 89
LYRFL RRT+S F++V+LKRLFMS+ N+PP+SLSR+ + MK G+E+K AVVVGT+TDD+
Sbjct: 2 LYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDV 61
Query: 90 RVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVK 149
RV EVP LKV ALR T AR+RI +AGG+ LTFDQLAL +P G TVLL GP+ RE +
Sbjct: 62 RVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYR 121
Query: 150 HFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFR 186
HFG APG PHSHTKPYVRSKGRKFERARG+R SRG++
Sbjct: 122 HFGKAPGTPHSHTKPYVRSKGRKFERARGRRASRGYK 158
>GENEDB_PFALCIPARUM|MAL13P1.209 [details] [associations]
symbol:MAL13P1.209 "60S ribosomal subunit
porotein L18, putative" species:5833 "Plasmodium falciparum"
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR000039 InterPro:IPR021132 PROSITE:PS01106 Pfam:PF00828
GO:GO:0006412 GO:GO:0003735 EMBL:AL844509 GO:GO:0022625
InterPro:IPR021131 SUPFAM:SSF52080 HOGENOM:HOG000213425 KO:K02883
PANTHER:PTHR10934 RefSeq:XP_002809060.1 ProteinModelPortal:C0H5G3
EnsemblProtists:MAL13P1.209:mRNA GeneID:813765 KEGG:pfa:MAL13P1.209
EuPathDB:PlasmoDB:PF3D7_1341300 ProtClustDB:PTZ00469 Uniprot:C0H5G3
Length = 187
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 113/186 (60%), Positives = 136/186 (73%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGI L G+ KK R S + YL+LLVKLY FL RRT++NF+K+I KRL M K +P
Sbjct: 1 MGIALKNVGRIKKHGRKHLVSKNPYLRLLVKLYNFLARRTNANFNKIIAKRLIMPKRYRP 60
Query: 61 PMSLSRLTKFMKGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
P+SLS+L M + IAVVVG++TDD R++ + LKV ALRFTETAR RIE AGGECL
Sbjct: 61 PLSLSKLQYHMANHPNDIAVVVGSITDDKRLFSLKQLKVCALRFTETARKRIEDAGGECL 120
Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
TFDQLAL+ P G+ VLLRGP AR A KHFG APG P S +PYVRSKGRKFE+ARG+R
Sbjct: 121 TFDQLALKYPTGKKCVLLRGPTKARTAEKHFGKAPGKPKSKARPYVRSKGRKFEKARGRR 180
Query: 181 NSRGFR 186
SR ++
Sbjct: 181 KSRAYK 186
>UNIPROTKB|C0H5G3 [details] [associations]
symbol:MAL13P1.209 "60S ribosomal protein L18"
species:36329 "Plasmodium falciparum 3D7" [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISS] InterPro:IPR000039
InterPro:IPR021132 PROSITE:PS01106 Pfam:PF00828 GO:GO:0006412
GO:GO:0003735 EMBL:AL844509 GO:GO:0022625 InterPro:IPR021131
SUPFAM:SSF52080 HOGENOM:HOG000213425 KO:K02883 PANTHER:PTHR10934
RefSeq:XP_002809060.1 ProteinModelPortal:C0H5G3
EnsemblProtists:MAL13P1.209:mRNA GeneID:813765 KEGG:pfa:MAL13P1.209
EuPathDB:PlasmoDB:PF3D7_1341300 ProtClustDB:PTZ00469 Uniprot:C0H5G3
Length = 187
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 113/186 (60%), Positives = 136/186 (73%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGI L G+ KK R S + YL+LLVKLY FL RRT++NF+K+I KRL M K +P
Sbjct: 1 MGIALKNVGRIKKHGRKHLVSKNPYLRLLVKLYNFLARRTNANFNKIIAKRLIMPKRYRP 60
Query: 61 PMSLSRLTKFMKGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
P+SLS+L M + IAVVVG++TDD R++ + LKV ALRFTETAR RIE AGGECL
Sbjct: 61 PLSLSKLQYHMANHPNDIAVVVGSITDDKRLFSLKQLKVCALRFTETARKRIEDAGGECL 120
Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
TFDQLAL+ P G+ VLLRGP AR A KHFG APG P S +PYVRSKGRKFE+ARG+R
Sbjct: 121 TFDQLALKYPTGKKCVLLRGPTKARTAEKHFGKAPGKPKSKARPYVRSKGRKFEKARGRR 180
Query: 181 NSRGFR 186
SR ++
Sbjct: 181 KSRAYK 186
>UNIPROTKB|H0YHA7 [details] [associations]
symbol:RPL18 "60S ribosomal protein L18" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000039 InterPro:IPR021132
PROSITE:PS01106 Pfam:PF00828 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR021131 SUPFAM:SSF52080 PANTHER:PTHR10934
ChiTaRS:RPL18 HGNC:HGNC:10310 EMBL:AC022154 PRIDE:H0YHA7
Ensembl:ENST00000546623 Bgee:H0YHA7 Uniprot:H0YHA7
Length = 167
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 109/165 (66%), Positives = 131/165 (79%)
Query: 30 VKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMK--GKEDKIAVVVGTVTD 87
VKLYRFL RRT+S F++V+LKRLFMS+ N+PP+SLSR+ + MK G+E+K AVVVGT+TD
Sbjct: 2 VKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITD 61
Query: 88 DIRVYEVPALK------VTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGP 141
D+RV EVP LK V ALR T AR+RI +AGG+ LTFDQLAL +P G TVLL GP
Sbjct: 62 DVRVQEVPKLKPCPLHQVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGP 121
Query: 142 KNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFR 186
+ RE +HFG APG PHSHTKPYVRSKGRKFERARG+R SRG++
Sbjct: 122 RKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGRRASRGYK 166
>UNIPROTKB|G3V203 [details] [associations]
symbol:RPL18 "60S ribosomal protein L18" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000039 InterPro:IPR021132
PROSITE:PS01106 Pfam:PF00828 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:CH471177 InterPro:IPR021131 SUPFAM:SSF52080
PANTHER:PTHR10934 ChiTaRS:RPL18 UniGene:Hs.515517 HGNC:HGNC:10310
EMBL:AC022154 ProteinModelPortal:G3V203 SMR:G3V203 PRIDE:G3V203
Ensembl:ENST00000549273 ArrayExpress:G3V203 Bgee:G3V203
Uniprot:G3V203
Length = 164
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 106/165 (64%), Positives = 129/165 (78%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MG+D I K +K +R PKS DIYL+LLVKLYRFL RRT+S F++V+LKRLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+SLSR+ + MK G+E+K AVVVGT+TDD+RV EVP LKV ALR T AR+RI +AGG+
Sbjct: 60 PLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGK 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTK 163
LTFDQLAL +P G TVLL GP+ RE +HFG APG PHSHTK
Sbjct: 120 ILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTK 164
>UNIPROTKB|D4AD69 [details] [associations]
symbol:D4AD69 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000039
Pfam:PF00828 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR021131 SUPFAM:SSF52080 PANTHER:PTHR10934
GeneTree:ENSGT00390000012976 OrthoDB:EOG4HHP3F IPI:IPI00557647
PRIDE:D4AD69 Ensembl:ENSRNOT00000028940 Uniprot:D4AD69
Length = 184
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 114/190 (60%), Positives = 138/190 (72%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MG+D I K +K +R KS DIYL LLVKLYRFL RRT+S F++V+LKRLFMS N+P
Sbjct: 1 MGVD-IRHHKDQKVRRKELKSQDIYLWLLVKLYRFLARRTNSTFNQVVLKRLFMSCTNQP 59
Query: 61 PMSLSRLTKFMKGK-EDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE- 118
P+SLS++ + MK E+K AVVVGTVTDD+R+ EVP LKV ALR + + R+RI KAGG
Sbjct: 60 PLSLSQMIQKMKLPWENKTAVVVGTVTDDVRILEVPKLKVCALRVS-SRRSRILKAGGGV 118
Query: 119 --C--LTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE 174
C LTFDQLAL +P G+ TV+L GP+ RE +HFG APG PHSHTKP KFE
Sbjct: 119 GGCKILTFDQLALESPKGRGTVVLSGPRKGREVYRHFGKAPGTPHSHTKP-------KFE 171
Query: 175 RARGKRNSRG 184
RARG+R SRG
Sbjct: 172 RARGRRASRG 181
>UNIPROTKB|I3LFL4 [details] [associations]
symbol:RPL18 "60S ribosomal protein L18" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR000039 InterPro:IPR021132 PROSITE:PS01106 Pfam:PF00828
GO:GO:0006412 GO:GO:0003735 GO:GO:0022625 InterPro:IPR021131
SUPFAM:SSF52080 PANTHER:PTHR10934 GeneTree:ENSGT00390000012976
EMBL:FQ311972 Ensembl:ENSSSCT00000028278 OMA:HERSTHR Uniprot:I3LFL4
Length = 169
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 100/169 (59%), Positives = 124/169 (73%)
Query: 2 GIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPP 61
G+D I K +K +R PKS DIYL+LLVKLYRFL RRT+S F++V+LKRLFMS+ N+PP
Sbjct: 2 GVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 62 MSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGEC 119
+SLSR+ + MK G+E K AVVVGT+TDD+RV EVP LKV ALR + AR+RI KAGG+
Sbjct: 61 LSLSRMIRKMKLPGREGKTAVVVGTITDDVRVQEVPKLKVCALRVSSRARSRILKAGGKI 120
Query: 120 LTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRS 168
LTFDQLAL +P G TVLL GP+ RE +HFG G H KP ++
Sbjct: 121 LTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGRPQGPAQPHHKPLTQA 169
>DICTYBASE|DDB_G0279997 [details] [associations]
symbol:rpl18 "S60 ribosomal protein L18"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000039 PROSITE:PS01106
dictyBase:DDB_G0279997 Pfam:PF00828 GenomeReviews:CM000152_GR
GO:GO:0006412 EMBL:AAFI02000035 GO:GO:0005840 GO:GO:0003735
InterPro:IPR021131 SUPFAM:SSF52080 eggNOG:COG1727 KO:K02883
OMA:KVRRTEP PANTHER:PTHR10934 RefSeq:XP_641456.1
ProteinModelPortal:Q54VZ4 SMR:Q54VZ4 STRING:Q54VZ4 PRIDE:Q54VZ4
EnsemblProtists:DDB0229960 GeneID:8622342 KEGG:ddi:DDB_G0279997
Uniprot:Q54VZ4
Length = 181
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 102/182 (56%), Positives = 125/182 (68%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
M ID K ++T N Y LLVKLYRFL RRT+S F+KV+LKRL +K N+P
Sbjct: 1 MAIDKSKRFLRKTGRKTLVSQNP-YHALLVKLYRFLARRTNSKFNKVVLKRLLQTKTNRP 59
Query: 61 PMSLSRLTKFMKG-KEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGEC 119
P+S+SR+ MK K KIAV VGTV DD R+ + P L V ALRFTETAR+RI KAGG+
Sbjct: 60 PVSISRIANLMKDRKSGKIAVCVGTVVDDERLLDCPKLTVCALRFTETARSRIVKAGGKA 119
Query: 120 LTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGK 179
L+FDQ AL P G NT L++G ARE KHFG APG+P SH +PYVRS+G KF+R++
Sbjct: 120 LSFDQFALVRPRGNNTFLIKGVTKAREVYKHFGRAPGLPGSHARPYVRSEGIKFQRSK-T 178
Query: 180 RN 181
RN
Sbjct: 179 RN 180
>UNIPROTKB|F8VYV2 [details] [associations]
symbol:RPL18 "60S ribosomal protein L18" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000039 InterPro:IPR021132
PROSITE:PS01106 Pfam:PF00828 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR021131 SUPFAM:SSF52080 PANTHER:PTHR10934
ChiTaRS:RPL18 HGNC:HGNC:10310 EMBL:AC022154 IPI:IPI01021515
ProteinModelPortal:F8VYV2 SMR:F8VYV2 Ensembl:ENST00000550645
ArrayExpress:F8VYV2 Bgee:F8VYV2 Uniprot:F8VYV2
Length = 133
Score = 320 (117.7 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 65/109 (59%), Positives = 83/109 (76%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MG+D I K +K +R PKS DIYL+LLVKLYRFL RRT+S F++V+LKRLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTET 107
P+SLSR+ + MK G+E+K AVVVGT+TDD+RV EVP LK + T
Sbjct: 60 PLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKAPGTPHSHT 108
Score = 158 (60.7 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 28/33 (84%), Positives = 31/33 (93%)
Query: 154 APGVPHSHTKPYVRSKGRKFERARGKRNSRGFR 186
APG PHSHTKPYVRSKGRKFERARG+R SRG++
Sbjct: 100 APGTPHSHTKPYVRSKGRKFERARGRRASRGYK 132
>UNIPROTKB|F8VUA6 [details] [associations]
symbol:RPL18 "60S ribosomal protein L18" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000039 Pfam:PF00828
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR021131
SUPFAM:SSF52080 PANTHER:PTHR10934 ChiTaRS:RPL18 HGNC:HGNC:10310
EMBL:AC022154 IPI:IPI01021673 ProteinModelPortal:F8VUA6 SMR:F8VUA6
PRIDE:F8VUA6 Ensembl:ENST00000550973 ArrayExpress:F8VUA6
Bgee:F8VUA6 Uniprot:F8VUA6
Length = 130
Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 88/129 (68%), Positives = 104/129 (80%)
Query: 54 MSKVNKPPMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARAR 111
MS+ N+PP+SLSR+ + MK G+E+K AVVVGT+TDD+RV EVP LKV ALR T AR+R
Sbjct: 1 MSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSR 60
Query: 112 IEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGR 171
I +AGG+ LTFDQLAL +P G TVLL GP+ RE +HFG APG PHSHTKPYVRSKGR
Sbjct: 61 ILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGR 120
Query: 172 KFERARGKR 180
KFERARG+R
Sbjct: 121 KFERARGRR 129
>UNIPROTKB|Q95342 [details] [associations]
symbol:RPL18 "60S ribosomal protein L18" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000039 InterPro:IPR021132
PROSITE:PS01106 Pfam:PF00828 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR021131 SUPFAM:SSF52080 PANTHER:PTHR10934
HOVERGEN:HBG000875 EMBL:Z81178 PRIDE:Q95342 Uniprot:Q95342
Length = 104
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 66/105 (62%), Positives = 82/105 (78%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MG+D I K +K +R PKS DIYL+LLVKL RFL RRT+S F++V+LKRLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLXRFLARRTNSTFNQVVLKRLFMSRTNRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALR 103
P+SLSR+ + MK G+E K AVVVGT+TDD+R EVP LKV ALR
Sbjct: 60 PLSLSRMXRKMKLPGREGKTAVVVGTITDDVRFQEVPKLKVCALR 104
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 187 187 0.00085 110 3 11 22 0.42 32
31 0.41 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 29
No. of states in DFA: 531 (57 KB)
Total size of DFA: 123 KB (2081 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.75u 0.09s 16.84t Elapsed: 00:00:01
Total cpu time: 16.75u 0.09s 16.84t Elapsed: 00:00:01
Start: Thu May 9 20:21:43 2013 End: Thu May 9 20:21:44 2013