BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029840
(187 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42791|RL182_ARATH 60S ribosomal protein L18-2 OS=Arabidopsis thaliana GN=RPL18B PE=1
SV=2
Length = 187
Score = 336 bits (861), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 161/187 (86%), Positives = 179/187 (95%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGIDLIAGGKSKK+KRTAPKS+D+YLKL VKLYRFLVRRT+S F+ VILKRLFMSKVNK
Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 60
Query: 61 PMSLSRLTKFMKGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
P+SLSRL +FM GKEDKIAV+VGT+TDD+RV+E+PA+KVTALRFTE ARARIEKAGGECL
Sbjct: 61 PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120
Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
TFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVR+KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 180
Query: 181 NSRGFRV 187
SRGF+V
Sbjct: 181 KSRGFKV 187
>sp|Q940B0|RL183_ARATH 60S ribosomal protein L18-3 OS=Arabidopsis thaliana GN=RPL18C PE=2
SV=1
Length = 187
Score = 336 bits (861), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 161/187 (86%), Positives = 180/187 (96%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGIDLIAGGKSKK+KRTAPKS+D+YLKLLVKLYRFLVRR++SNF+ VILKRLFMSKVNK
Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 60
Query: 61 PMSLSRLTKFMKGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
P+SLSRL +FM GK+DKIAV+VGT+TDD+RV+E+PA+KVTALRFTE ARARIEKAGGECL
Sbjct: 61 PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120
Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
TFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHS+TKPYVR KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKR 180
Query: 181 NSRGFRV 187
SRGF+V
Sbjct: 181 KSRGFKV 187
>sp|O65729|RL18_CICAR 60S ribosomal protein L18 (Fragment) OS=Cicer arietinum GN=RPL18
PE=2 SV=1
Length = 183
Score = 321 bits (822), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 158/184 (85%), Positives = 173/184 (94%), Gaps = 1/184 (0%)
Query: 4 DLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMS 63
DL AGGK+KK+KRT+PKSNDIYLKLLVKLYRFLVRRTDSNF+ VILKRLFMSKVN+PP+S
Sbjct: 1 DLKAGGKNKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLS 60
Query: 64 LSRLTKFMKGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFD 123
LSRL K+M+GKE KI VVVG VTDDIRVY+VP +KVTAL+FTETARARI+KAGGECLTFD
Sbjct: 61 LSRLIKYMQGKEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFD 120
Query: 124 QLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSR 183
QLALR PL +TVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE+ARG+R SR
Sbjct: 121 QLALRLPL-TDTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSR 179
Query: 184 GFRV 187
GFRV
Sbjct: 180 GFRV 183
>sp|O22254|RL181_ARATH Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana
GN=RPL18A PE=2 SV=3
Length = 188
Score = 298 bits (764), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/188 (77%), Positives = 165/188 (87%), Gaps = 1/188 (0%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGIDLIAGGKSKK+KRT PKS+D+YLKLLVK R+LVRRT+S F+ VILKRLFMSKVNK
Sbjct: 1 MGIDLIAGGKSKKTKRTEPKSDDVYLKLLVKANRYLVRRTESKFNAVILKRLFMSKVNKA 60
Query: 61 PMSLSRLTKFMKGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
P+SLSRL ++M GK+ KIAV+VGTVTDD+R+ +VPAL VTALRFTE+ARARI KAGGECL
Sbjct: 61 PLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECL 120
Query: 121 TFDQLALRAP-LGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGK 179
TFDQLAL P +NTVLLRGPKN REAVKHFGPAPGVPHSHTKPYVR G+K E ARG+
Sbjct: 121 TFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKKIEIARGR 180
Query: 180 RNSRGFRV 187
R SRGF+V
Sbjct: 181 RRSRGFKV 188
>sp|Q4GXG7|RL18_TIMBA 60S ribosomal protein L18 OS=Timarcha balearica GN=RpL18 PE=2 SV=1
Length = 188
Score = 252 bits (644), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 125/188 (66%), Positives = 153/188 (81%), Gaps = 3/188 (1%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGID I +K +RT PKS D+YL+LLVKLYR+L RRT + F+K+ILKRLFMSK+ +P
Sbjct: 1 MGID-INHKYDRKVRRTEPKSQDVYLRLLVKLYRYLARRTGAKFNKIILKRLFMSKIYRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+SLS++ +FMK G+E AV+VGTVTDD R++E+P L + ALR T+TARA I KAGGE
Sbjct: 60 PISLSKVVRFMKKPGRELLTAVIVGTVTDDSRIFEIPKLSICALRVTQTARAGILKAGGE 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG 178
+TFDQLALR+P G TVLL+G +NAREAVKHFGPAPGVPHSH KP VRSKGRKFERARG
Sbjct: 120 VITFDQLALRSPTGSKTVLLQGKRNAREAVKHFGPAPGVPHSHAKPLVRSKGRKFERARG 179
Query: 179 KRNSRGFR 186
+R S G++
Sbjct: 180 RRRSCGYK 187
>sp|Q0PXY6|RL18_DIACI 60S ribosomal protein L18 OS=Diaphorina citri GN=RpL18 PE=2 SV=1
Length = 188
Score = 250 bits (638), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 118/188 (62%), Positives = 155/188 (82%), Gaps = 3/188 (1%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MG+D I ++ +RT PKS D+YL+LLVKLYRFL RRT+S F+K+ILKRLFMSK+N+P
Sbjct: 1 MGVD-ICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
PM++S++ +FMK +E ++AV+VGT+ DD R++ +P L V ALR T+ AR+RI KAGGE
Sbjct: 60 PMAISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTVCALRVTDKARSRILKAGGE 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG 178
+TFDQLALRAP G+NTVL++G + REA KHFGPAPGVPHSHTK +VRSKGR+FERARG
Sbjct: 120 IITFDQLALRAPTGKNTVLMQGKRTGREANKHFGPAPGVPHSHTKAHVRSKGRQFERARG 179
Query: 179 KRNSRGFR 186
+R S+G++
Sbjct: 180 RRTSKGYK 187
>sp|Q56FG8|RL18_LYSTE 60S ribosomal protein L18 OS=Lysiphlebus testaceipes GN=RpL18 PE=2
SV=1
Length = 188
Score = 249 bits (636), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 122/188 (64%), Positives = 153/188 (81%), Gaps = 3/188 (1%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGID I +K +RT P+S DIYL+LLVK+YRFL RRT+S F ++ILKRLFMS++N P
Sbjct: 1 MGID-INHKYDRKVRRTEPRSQDIYLRLLVKVYRFLARRTNSKFSRIILKRLFMSRINLP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+SL+R+ +FMK +++ IAVVVGT+TDD R++E+P LKV ALR TE AR RI KAGGE
Sbjct: 60 PISLARVCRFMKKESRKNSIAVVVGTITDDARIFEIPKLKVCALRITEKARGRILKAGGE 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG 178
+TF++LA +P G TVL++G +NAREAVKHFGPAPGVPHSHTKP VRSKGRKFERARG
Sbjct: 120 IITFEKLAEISPTGNKTVLMQGRRNAREAVKHFGPAPGVPHSHTKPLVRSKGRKFERARG 179
Query: 179 KRNSRGFR 186
+R S G++
Sbjct: 180 RRKSCGYK 187
>sp|Q9VS34|RL18_DROME 60S ribosomal protein L18 OS=Drosophila melanogaster GN=RpL18 PE=1
SV=1
Length = 188
Score = 243 bits (620), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 121/188 (64%), Positives = 148/188 (78%), Gaps = 3/188 (1%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGID I +K +RT PKS D+YL+LLVKLYRFL RRT+ F+++ILKRLFMSK+N+P
Sbjct: 1 MGID-INHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRP 59
Query: 61 PMSLSRLTKFMKG--KEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+SL R+ +F K + + VVVGTVTDD R+ VP L V AL T+TAR RI KAGGE
Sbjct: 60 PLSLQRIARFFKAANQPESTIVVVGTVTDDARLLVVPKLTVCALHVTQTARERILKAGGE 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG 178
LTFDQLALR+P G+NT+LL+G + AR A KHFG APGVPHSHT+PYVRSKGRKFERARG
Sbjct: 120 VLTFDQLALRSPTGKNTLLLQGRRTARTACKHFGKAPGVPHSHTRPYVRSKGRKFERARG 179
Query: 179 KRNSRGFR 186
+R+S G++
Sbjct: 180 RRSSCGYK 187
>sp|Q4PM04|RL18_IXOSC 60S ribosomal protein L18 OS=Ixodes scapularis GN=RpL18 PE=2 SV=1
Length = 188
Score = 239 bits (609), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 148/176 (84%), Gaps = 3/176 (1%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGID I +K R PKS ++YL LLVK+YRFL RR+ + F++++LKRLFMS++NKP
Sbjct: 1 MGID-INHKYDRKVVRRRPKSENVYLGLLVKVYRFLARRSGAKFNRIVLKRLFMSRINKP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
+SL+R+T+FMK G+E+ IAVVVGTVTDD+R+Y+VP L++ ALR TE ARARI KAGGE
Sbjct: 60 VISLARVTRFMKKPGRENLIAVVVGTVTDDLRLYDVPKLRLCALRVTERARARILKAGGE 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE 174
LTFDQLA++AP G+ TVL++GP+N+REA +HFGPAPGVPHSHTKPYVRSKGRKFE
Sbjct: 120 ILTFDQLAVQAPKGKGTVLMQGPRNSREACRHFGPAPGVPHSHTKPYVRSKGRKFE 175
>sp|Q90YV0|RL18_ICTPU 60S ribosomal protein L18 OS=Ictalurus punctatus GN=rpl18 PE=2 SV=3
Length = 188
Score = 237 bits (605), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 140/176 (79%), Gaps = 3/176 (1%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MG+D I K +K RT PKS DIYL+LLVKLYRFL RR+D+ F+KV+LKRLFMSK N+P
Sbjct: 1 MGVD-IRHNKDRKVHRTEPKSQDIYLRLLVKLYRFLARRSDAPFNKVVLKRLFMSKTNRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P++LSRL + MK G+E+KIAVVVGT+TDD+R+ +P LKV ALR T AR RI KAGG+
Sbjct: 60 PLALSRLIRKMKLQGRENKIAVVVGTITDDVRILNIPKLKVCALRVTAGARRRILKAGGQ 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE 174
+TFDQLA+ P GQ TVLL GP+ ARE +HFG APG PHSHTKPY+RSKGRKFE
Sbjct: 120 VMTFDQLAVTTPKGQGTVLLSGPRKAREVYRHFGKAPGTPHSHTKPYIRSKGRKFE 175
>sp|P12001|RL18_RAT 60S ribosomal protein L18 OS=Rattus norvegicus GN=Rpl18 PE=2 SV=2
Length = 188
Score = 236 bits (601), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 116/176 (65%), Positives = 141/176 (80%), Gaps = 3/176 (1%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MG+D I K +K +R PKS DIYL+LLVKLYRFL RRT+S F++V+LKRLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+SLSR+ + MK G+E+K AVVVGT+TDD+R+ EVP LKV ALR + AR+RI KAGG+
Sbjct: 60 PLSLSRMIRKMKLPGRENKTAVVVGTITDDVRILEVPKLKVCALRVSSRARSRILKAGGK 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE 174
LTFDQLAL +P G+ TVLL GP+ RE +HFG APG PHSHTKPYVRSKGRKFE
Sbjct: 120 ILTFDQLALESPKGRGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFE 175
>sp|Q4R5H8|RL18_MACFA 60S ribosomal protein L18 OS=Macaca fascicularis GN=RPL18 PE=2 SV=1
Length = 188
Score = 234 bits (598), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 140/176 (79%), Gaps = 3/176 (1%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MG+D I K +K +R PKS DIYL+LLVKLYRFL RRT+S F++V+LKRLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+SLSR+ + MK G+E+K AVVVGT+TDD+RV EVP LKV ALR T AR+RI +AGG+
Sbjct: 60 PLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGK 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE 174
LTFDQLAL +P G TVLL GP+ RE +HFG APG PHSHTKPYVRSKGRKFE
Sbjct: 120 ILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFE 175
>sp|Q07020|RL18_HUMAN 60S ribosomal protein L18 OS=Homo sapiens GN=RPL18 PE=1 SV=2
Length = 188
Score = 234 bits (598), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 140/176 (79%), Gaps = 3/176 (1%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MG+D I K +K +R PKS DIYL+LLVKLYRFL RRT+S F++V+LKRLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+SLSR+ + MK G+E+K AVVVGT+TDD+RV EVP LKV ALR T AR+RI +AGG+
Sbjct: 60 PLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGK 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE 174
LTFDQLAL +P G TVLL GP+ RE +HFG APG PHSHTKPYVRSKGRKFE
Sbjct: 120 ILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFE 175
>sp|D0VWQ3|RL18_CANFA Ribosomal protein L18 OS=Canis familiaris GN=RPL18 PE=1 SV=2
Length = 188
Score = 234 bits (597), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 140/176 (79%), Gaps = 3/176 (1%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MG+D I K +K +R PKS DIYL+LLVKLYRFL RRT+S F++V+LKRLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+SLSR+ + MK G+E+K AVVVGT+TDD+RV EVP LKV ALR + AR+RI KAGG+
Sbjct: 60 PLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVSSRARSRILKAGGK 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE 174
LTFDQLAL +P G TVLL GP+ RE +HFG APG PHSHTKPYVRSKGRKFE
Sbjct: 120 ILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFE 175
>sp|Q5E973|RL18_BOVIN 60S ribosomal protein L18 OS=Bos taurus GN=RPL18 PE=2 SV=3
Length = 188
Score = 233 bits (593), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 139/176 (78%), Gaps = 3/176 (1%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MG+D I K +K +R PKS DIYL+LLVKLYRFL RRT+S F++V+LKRLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+SLSR+ + MK G+E K AVVVGT+TDD+RV EVP LKV ALR + AR+RI KAGG+
Sbjct: 60 PLSLSRMIRKMKLPGREGKTAVVVGTITDDVRVQEVPKLKVCALRVSSRARSRILKAGGK 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE 174
LTFDQLAL +P G TVLL GP+ RE +HFG APG PHSHTKPYVRSKGRKFE
Sbjct: 120 ILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFE 175
>sp|Q962Y8|RL18_SPOFR 60S ribosomal protein L18 OS=Spodoptera frugiperda GN=RpL18 PE=2
SV=1
Length = 183
Score = 233 bits (593), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 118/184 (64%), Positives = 144/184 (78%), Gaps = 5/184 (2%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGID I +K +RT KS D+YL+LLVKLYR+L RRT+S F+ +IL+RLFMS++N+P
Sbjct: 1 MGID-INHKHDRKVRRTEVKSQDVYLRLLVKLYRYLARRTNSKFNTIILRRLFMSRINRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+SLSRL + MK +E IAVVVGT+T+D+R+Y+VP + V AL TE ARARI AGGE
Sbjct: 60 PLSLSRLARHMKKPTREGMIAVVVGTITNDVRLYKVPKMSVAALHVTEKARARILAAGGE 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG 178
LTFDQLALRAP G TVLL+G +NAREAV+HFGPAPG P SHTKPYVR+KG ERAR
Sbjct: 120 ILTFDQLALRAPTGAKTVLLQGRRNAREAVRHFGPAPGAPRSHTKPYVRTKG--HERARP 177
Query: 179 KRNS 182
+R S
Sbjct: 178 RRRS 181
>sp|P02412|RL18B_XENLA 60S ribosomal protein L18-B OS=Xenopus laevis GN=rpl18-b PE=2 SV=4
Length = 188
Score = 231 bits (589), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/176 (64%), Positives = 141/176 (80%), Gaps = 3/176 (1%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGID I K +K +R PKS DIYL+LLVKLYRFL RRT+S+F++V+LKRLFMS+ N+P
Sbjct: 1 MGID-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNRVVLKRLFMSRTNRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+S+SRL + MK G+E+K AVVVG +TDD+R++++P LKV AL+ T R+RI K+GG+
Sbjct: 60 PLSMSRLIRKMKLQGRENKTAVVVGYITDDVRIHDIPKLKVCALKITSGDRSRILKSGGQ 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE 174
+TFDQLAL AP GQNTVLL GP+ ARE +HFG APG PHS TKPYV SKGRKFE
Sbjct: 120 IMTFDQLALAAPKGQNTVLLSGPRKAREVYRHFGKAPGTPHSRTKPYVLSKGRKFE 175
>sp|Q8TFH1|RL18B_SCHPO 60S ribosomal protein L18-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl18b PE=1 SV=1
Length = 187
Score = 230 bits (586), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 121/191 (63%), Positives = 141/191 (73%), Gaps = 8/191 (4%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGID I +KS+R+ P S ++YLKLLVKLYRFL RRTDS F+K ILKRLF SK N+P
Sbjct: 1 MGID-IERHHVRKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRP 59
Query: 61 PMSLSRLTKFMKGK----EDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAG 116
P+S+S++ K E K V+VGTVTDD R+ VP L V ALRFT++ARARI KAG
Sbjct: 60 PISISKIAALTSRKSASLEGKTTVIVGTVTDDERLLTVPKLSVAALRFTKSARARILKAG 119
Query: 117 GECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERA 176
GE LT DQLALRAP G NTVLLRG K+AREA +HFG PH H PYVRS+GRKFERA
Sbjct: 120 GEVLTLDQLALRAPTGSNTVLLRGKKHAREAYRHFGFG---PHKHKAPYVRSEGRKFERA 176
Query: 177 RGKRNSRGFRV 187
RG+R SR F+V
Sbjct: 177 RGRRKSRAFKV 187
>sp|Q1HR62|RL18_AEDAE 60S ribosomal protein L18 OS=Aedes aegypti GN=RpL18 PE=2 SV=1
Length = 189
Score = 228 bits (581), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/189 (62%), Positives = 146/189 (77%), Gaps = 4/189 (2%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGID I +K +RT PKS D+YL+LLVKLYRFL RRT F+K+IL+RLFMS+ N+P
Sbjct: 1 MGID-INHKWDRKVRRTKPKSLDVYLRLLVKLYRFLYRRTHKKFNKIILRRLFMSRTNQP 59
Query: 61 PMSLSRLTKFMK--GK-EDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGG 117
P+SLSR+ K MK GK E+ IAVVVGTVT+D R P + V ALR TE AR RI K GG
Sbjct: 60 PISLSRVAKLMKLRGKDENTIAVVVGTVTNDDRKLYCPKMNVCALRVTEKARERILKWGG 119
Query: 118 ECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERAR 177
+ TFDQLAL AP G+NTVL++G + AREA HFG APGVPHS+T+PYV+SKGRK+E+AR
Sbjct: 120 KIYTFDQLALVAPTGKNTVLMQGERTAREAFTHFGRAPGVPHSNTRPYVQSKGRKYEKAR 179
Query: 178 GKRNSRGFR 186
G+R+S GF+
Sbjct: 180 GRRSSCGFK 188
>sp|Q7QJM5|RL18_ANOGA 60S ribosomal protein L18 OS=Anopheles gambiae GN=RpL18 PE=3 SV=3
Length = 189
Score = 228 bits (580), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/189 (60%), Positives = 148/189 (78%), Gaps = 4/189 (2%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGID I +K +RT PKS D+YL LLVKLYRFL RRT F+K++++RLFMS+ N P
Sbjct: 1 MGID-INHKWDRKVRRTRPKSLDVYLSLLVKLYRFLYRRTKKKFNKIVMRRLFMSRTNHP 59
Query: 61 PMSLSRLTKFMK--GKEDK-IAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGG 117
PMSL+R+ MK GK++K +AVV+GTVT+D+R+ +VP L V ALR T+ AR RI K GG
Sbjct: 60 PMSLNRVAHLMKLRGKDEKSVAVVIGTVTNDVRMMDVPKLNVCALRVTDKARQRILKNGG 119
Query: 118 ECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERAR 177
+ TFDQLAL +P G+NTVL++G + ARE KHFG APGVPHS+T+PYV+SKGRKFE+AR
Sbjct: 120 KIYTFDQLALLSPTGRNTVLMQGKRTAREVFKHFGRAPGVPHSNTRPYVQSKGRKFEKAR 179
Query: 178 GKRNSRGFR 186
G+R+S G++
Sbjct: 180 GRRSSCGYK 188
>sp|Q6F442|RL18_PLUXY 60S ribosomal protein L18 OS=Plutella xylostella GN=RpL18 PE=2 SV=1
Length = 183
Score = 227 bits (579), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/184 (61%), Positives = 144/184 (78%), Gaps = 5/184 (2%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGID I +K +RT KS D+YL+LLVKLYR+L RRT++ F++++L+RLFMS++N+P
Sbjct: 1 MGID-INHKHDRKVRRTEVKSQDVYLRLLVKLYRYLARRTNAKFNQIVLRRLFMSRINRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+SLSRL + MK +E IAVVVGT+T+D R+Y+VP + V AL TE ARARI AGGE
Sbjct: 60 PLSLSRLARHMKKPTREGLIAVVVGTITNDTRLYKVPKMTVAALHVTEKARARILDAGGE 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG 178
LTFDQLALRAP G+ TVL++G +NAREAV+HFGPAPG P SHTKPYVRSKG E+A+
Sbjct: 120 ILTFDQLALRAPTGRKTVLIQGQRNAREAVRHFGPAPGAPRSHTKPYVRSKG--HEQAKP 177
Query: 179 KRNS 182
R S
Sbjct: 178 SRRS 181
>sp|Q5UAS1|RL18_BOMMO 60S ribosomal protein L18 OS=Bombyx mori GN=RpL18 PE=2 SV=1
Length = 183
Score = 227 bits (578), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 113/184 (61%), Positives = 145/184 (78%), Gaps = 5/184 (2%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGID I +K +RT KS DIYL+LLVKLYR+L RRT++ F++++L+RLFMS++N+P
Sbjct: 1 MGID-INHKHDRKVRRTEVKSQDIYLRLLVKLYRYLARRTNAKFNQIVLRRLFMSRINRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+S+SRL + MK +E IAVVVGTVT+D+R+Y++P + V AL TE ARARI AGGE
Sbjct: 60 PISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGE 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG 178
LTFDQLALRAP G+ TVL++G +NAREAV+HFGPAPG P SHTKPYVR+KG E+AR
Sbjct: 120 ILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKG--HEKARP 177
Query: 179 KRNS 182
R +
Sbjct: 178 SRRA 181
>sp|P09897|RL18A_XENLA 60S ribosomal protein L18-A OS=Xenopus laevis GN=rpl18-a PE=2 SV=2
Length = 188
Score = 225 bits (573), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 138/176 (78%), Gaps = 3/176 (1%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGID I K +K +R PKS DIYL+LLVKLYRFL RRT+S+F++V+LKRLFMS+ N+P
Sbjct: 1 MGID-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNRVVLKRLFMSRTNRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+S+SRL + MK +E+K AVVVG +T D+R++++P L V AL+ T AR+RI KAGG+
Sbjct: 60 PLSMSRLIRKMKLPRRENKTAVVVGCITADVRIHDIPKLTVCALKLTSGARSRILKAGGQ 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE 174
+TFDQLAL AP GQNTVLL GP+ ARE +HFG AP PHS TKPYV SKGRKFE
Sbjct: 120 IMTFDQLALAAPKGQNTVLLSGPRKAREVYRHFGKAPSTPHSRTKPYVLSKGRKFE 175
>sp|Q2M0G4|RL18_DROPS 60S ribosomal protein L18 OS=Drosophila pseudoobscura pseudoobscura
GN=RpL18 PE=3 SV=2
Length = 189
Score = 223 bits (569), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 118/187 (63%), Positives = 147/187 (78%), Gaps = 3/187 (1%)
Query: 2 GIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPP 61
GID I +K +RT PKS D+YL+LLVKLYRFL RRT+ F+++ILKRLFMSK+N+PP
Sbjct: 3 GID-INHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPP 61
Query: 62 MSLSRLTKFMKG--KEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGEC 119
+SL R+ +F K + + VVVGTVTDD R+ VP L + AL T+TAR RI KAGGE
Sbjct: 62 LSLQRIARFFKAANQPESTVVVVGTVTDDARLLVVPKLTLCALHVTQTARERILKAGGEV 121
Query: 120 LTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGK 179
LTFDQLAL++P G+NT+LL+G + AR A KHFG APGVPHSHT+PYVRSKGRKFERARG+
Sbjct: 122 LTFDQLALKSPTGKNTLLLQGKRTARTACKHFGKAPGVPHSHTRPYVRSKGRKFERARGR 181
Query: 180 RNSRGFR 186
R+S G++
Sbjct: 182 RSSCGYK 188
>sp|P69091|RL18_ORENI 60S ribosomal protein L18 OS=Oreochromis niloticus GN=rpl18 PE=2
SV=2
Length = 188
Score = 223 bits (567), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 120/188 (63%), Positives = 152/188 (80%), Gaps = 3/188 (1%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MG+D I K +K R PKS DIYL+LLVKLYRFL RR+++ F++V+L+RLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVHRKEPKSQDIYLRLLVKLYRFLARRSNAPFNRVVLRRLFMSRTNRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+++SRL + MK G+E+KIAVVVGTVTDD+R+ ++P LK+ ALR T+ AR RI KAGG+
Sbjct: 60 PIAVSRLIRKMKLPGRENKIAVVVGTVTDDVRIQDIPKLKICALRVTDGARRRILKAGGQ 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG 178
+TFDQLAL +P GQ TVLL GP+ ARE +HFG APG PHSHTKPYVRSKGRKFERARG
Sbjct: 120 VMTFDQLALASPKGQGTVLLSGPRKAREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARG 179
Query: 179 KRNSRGFR 186
+R S G++
Sbjct: 180 RRASCGYK 187
>sp|P69090|RL18_OREMO 60S ribosomal protein L18 OS=Oreochromis mossambicus GN=rpl18 PE=3
SV=2
Length = 188
Score = 223 bits (567), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 120/188 (63%), Positives = 152/188 (80%), Gaps = 3/188 (1%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MG+D I K +K R PKS DIYL+LLVKLYRFL RR+++ F++V+L+RLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVHRKEPKSQDIYLRLLVKLYRFLARRSNAPFNRVVLRRLFMSRTNRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+++SRL + MK G+E+KIAVVVGTVTDD+R+ ++P LK+ ALR T+ AR RI KAGG+
Sbjct: 60 PIAVSRLIRKMKLPGRENKIAVVVGTVTDDVRIQDIPKLKICALRVTDGARRRILKAGGQ 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG 178
+TFDQLAL +P GQ TVLL GP+ ARE +HFG APG PHSHTKPYVRSKGRKFERARG
Sbjct: 120 VMTFDQLALASPKGQGTVLLSGPRKAREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARG 179
Query: 179 KRNSRGFR 186
+R S G++
Sbjct: 180 RRASCGYK 187
>sp|A3F4S0|RL18_TAEAS 60S ribosomal protein L18 OS=Taenia asiatica GN=RPL18 PE=2 SV=1
Length = 180
Score = 218 bits (554), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/174 (63%), Positives = 137/174 (78%), Gaps = 3/174 (1%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGID+ K K +R PKS D+YL+L+VKLY+FL RRT S F+ ++ +RLFMS++N+
Sbjct: 1 MGIDISHRNKRKVVRRN-PKSGDVYLRLMVKLYKFLARRTHSKFNNIVKRRLFMSRINRA 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+SLSRLT+ MK G+E KIAVV+GTVT+DIR+ EVP L V ALR T AR RI KAGG+
Sbjct: 60 PLSLSRLTRQMKKPGREGKIAVVIGTVTNDIRMREVPKLTVCALRVTAGARTRILKAGGK 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRK 172
+T DQLAL+APLG+ TVLL+GP+ AREA +HFGPAPGVP SHTKPYV SK R+
Sbjct: 120 VMTVDQLALKAPLGKGTVLLQGPRKAREACRHFGPAPGVPGSHTKPYVISKSRE 173
>sp|Q10192|RL18A_SCHPO 60S ribosomal protein L18-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl18a PE=1 SV=1
Length = 187
Score = 214 bits (544), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/191 (62%), Positives = 142/191 (74%), Gaps = 8/191 (4%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGID I KKS+R+ P S ++YLKLLVKLYRFL RRTDS F+K ILKRLF SK N+P
Sbjct: 1 MGID-IERHHVKKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRP 59
Query: 61 PMSLSRLTKFMKGK----EDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAG 116
P+S+S++ K ++K VVVGTVTDD R+ VP L + ALRFT++ARARI KAG
Sbjct: 60 PISISKIAALTSRKSASSQNKTTVVVGTVTDDERMLTVPKLSIAALRFTKSARARILKAG 119
Query: 117 GECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERA 176
GE LT DQLALRAP G NTVL+RG K+AREA +HFG PH H PYVRS+GRKFERA
Sbjct: 120 GEVLTLDQLALRAPTGSNTVLVRGKKHAREAYRHFGFG---PHKHKAPYVRSEGRKFERA 176
Query: 177 RGKRNSRGFRV 187
RG+R SR F+V
Sbjct: 177 RGRRKSRAFKV 187
>sp|Q60P81|RL18_CAEBR 60S ribosomal protein L18 OS=Caenorhabditis briggsae GN=rpl-18 PE=3
SV=1
Length = 188
Score = 214 bits (544), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 106/176 (60%), Positives = 134/176 (76%), Gaps = 3/176 (1%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGID I+ + ++RTAPKS + YL+LL KLY FL RRT F+ ++LKRL MS+ N+
Sbjct: 1 MGID-ISHKHDRVARRTAPKSENPYLRLLSKLYAFLARRTGEKFNAIVLKRLRMSRRNRQ 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+SL+++ + +K G E K V + TVTDD R+YEVP + + AL TE ARARI AGGE
Sbjct: 60 PLSLAKVARVVKQAGNEKKTVVTLSTVTDDARLYEVPKISLAALHVTEGARARILAAGGE 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE 174
+T DQLALR+P G+NTV L+GP++AREA KHFGPAPGVPHSHTKP+VRSKGRKFE
Sbjct: 120 IITLDQLALRSPKGENTVFLQGPRSAREAEKHFGPAPGVPHSHTKPHVRSKGRKFE 175
>sp|P35980|RL18_MOUSE 60S ribosomal protein L18 OS=Mus musculus GN=Rpl18 PE=2 SV=3
Length = 188
Score = 213 bits (543), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 141/176 (80%), Gaps = 3/176 (1%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MG+D I K +K +R PKS DIYL+LLVKLYRFL RRT+S F++V+LKRLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+SLSR+ + MK G+E+K AVVVGTVTDD+R+ EVP LKV ALR + AR+RI KAGG+
Sbjct: 60 PLSLSRMIRKMKLPGRENKTAVVVGTVTDDVRILEVPKLKVCALRVSSRARSRILKAGGK 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE 174
LTFDQLAL +P G+ TVLL GP+ RE +HFG APG PHSHTKPYVRSKGRKFE
Sbjct: 120 ILTFDQLALESPKGRGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFE 175
>sp|O45946|RL18_CAEEL 60S ribosomal protein L18 OS=Caenorhabditis elegans GN=rpl-18 PE=3
SV=1
Length = 188
Score = 213 bits (541), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 106/176 (60%), Positives = 133/176 (75%), Gaps = 3/176 (1%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGID I + ++RTAPKS + YL+LL KLY FL RRT F+ ++LKRL MS+ N+
Sbjct: 1 MGID-INHKHDRVARRTAPKSENPYLRLLSKLYAFLARRTGEKFNAIVLKRLRMSRRNRQ 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+SL++L + ++ G E+K V + TVTDD R+Y VP + V AL TE ARARI AGGE
Sbjct: 60 PLSLAKLARAVQKAGNENKTVVTLSTVTDDARLYTVPKISVAALHVTEGARARILAAGGE 119
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFE 174
+T DQLAL++P G+NTV L+GP++AREA KHFGPAPGVPHSHTKPYVRSKGRKFE
Sbjct: 120 IITLDQLALKSPKGENTVFLQGPRSAREAEKHFGPAPGVPHSHTKPYVRSKGRKFE 175
>sp|P0CX50|RL18B_YEAST 60S ribosomal protein L18-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL18B PE=1 SV=1
Length = 186
Score = 213 bits (541), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 113/189 (59%), Positives = 144/189 (76%), Gaps = 5/189 (2%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGID + + RTAPKS+++YLKLLVKLY FL RRTD+ F+KV+LK LF+SK+N+P
Sbjct: 1 MGIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRP 60
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+S+SR+ + +K G +K VVVGTVTDD R++E P V ALRFT ARA+I KAGGE
Sbjct: 61 PVSVSRIARALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGE 120
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG 178
C+T DQLA+RAP GQNT++LRGP+N+REAV+HFG PH P + S GRKFERARG
Sbjct: 121 CITLDQLAVRAPKGQNTLILRGPRNSREAVRHFGMG---PHKGKAPRILSTGRKFERARG 177
Query: 179 KRNSRGFRV 187
+R S+GF+V
Sbjct: 178 RRRSKGFKV 186
>sp|P0CX49|RL18A_YEAST 60S ribosomal protein L18-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL18A PE=1 SV=1
Length = 186
Score = 213 bits (541), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 113/189 (59%), Positives = 144/189 (76%), Gaps = 5/189 (2%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGID + + RTAPKS+++YLKLLVKLY FL RRTD+ F+KV+LK LF+SK+N+P
Sbjct: 1 MGIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRP 60
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+S+SR+ + +K G +K VVVGTVTDD R++E P V ALRFT ARA+I KAGGE
Sbjct: 61 PVSVSRIARALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGE 120
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG 178
C+T DQLA+RAP GQNT++LRGP+N+REAV+HFG PH P + S GRKFERARG
Sbjct: 121 CITLDQLAVRAPKGQNTLILRGPRNSREAVRHFGMG---PHKGKAPRILSTGRKFERARG 177
Query: 179 KRNSRGFRV 187
+R S+GF+V
Sbjct: 178 RRRSKGFKV 186
>sp|Q4N438|RL18_THEPA 60S ribosomal protein L18 OS=Theileria parva GN=RPL18 PE=3 SV=1
Length = 184
Score = 203 bits (517), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 134/188 (71%), Gaps = 5/188 (2%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGIDL+ G+ KK R A S + YL+LLVKLY+FL RRTD +F+KV+LKRL M + K
Sbjct: 1 MGIDLVKAGRVKKPGRKALVSKNPYLRLLVKLYKFLSRRTDHSFNKVVLKRLLMPRRFKA 60
Query: 61 PMSLSRLTKFMKGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
P+SLS+L+K M+ + D AVVVGTVT+D R+ VP L V ALR TETAR RI +GGE L
Sbjct: 61 PLSLSKLSKHMEKRPDNTAVVVGTVTNDERMDVVPKLSVCALRVTETARKRILASGGEVL 120
Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHF-GPAPGVPHSHTKPYVRSKGRKFERARGK 179
TFDQL R+P G LLRG AREAVKHF G P KPYVRSKGRKFE+ARG+
Sbjct: 121 TFDQLVARSPTGSRCTLLRGATKAREAVKHFRNEVKGNP----KPYVRSKGRKFEKARGR 176
Query: 180 RNSRGFRV 187
R+SR F+V
Sbjct: 177 RHSRAFKV 184
>sp|Q4UFD5|RL18_THEAN 60S ribosomal protein L18 OS=Theileria annulata GN=RPL18 PE=3 SV=2
Length = 184
Score = 196 bits (499), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 132/187 (70%), Gaps = 5/187 (2%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MGIDL+ G+ KK R A S + YL+LLVKL++FL RRTD F+K++LKRL M + K
Sbjct: 1 MGIDLVKAGRVKKPGRKALVSKNPYLRLLVKLFKFLARRTDFPFNKIVLKRLLMPRRYKA 60
Query: 61 PMSLSRLTKFMKGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
P+SLS+L+K M+ + + AVV+GTVT D R+ VP L V ALR TETAR RI +GGE L
Sbjct: 61 PLSLSKLSKHMESRPNNTAVVIGTVTSDERMDVVPKLSVCALRVTETARKRILASGGEVL 120
Query: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHF-GPAPGVPHSHTKPYVRSKGRKFERARGK 179
TFDQL R+P+G LLRG AREAVKHF G P KPYVRSKGRKFE+ARG+
Sbjct: 121 TFDQLVARSPIGGKCTLLRGETKAREAVKHFRNEVKGNP----KPYVRSKGRKFEKARGR 176
Query: 180 RNSRGFR 186
R+SR F+
Sbjct: 177 RHSRAFK 183
>sp|P0DJ17|RL18_TETTH 60S ribosomal protein L18 OS=Tetrahymena thermophila GN=RPL18 PE=1
SV=1
Length = 181
Score = 193 bits (491), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 103/180 (57%), Positives = 131/180 (72%), Gaps = 3/180 (1%)
Query: 1 MGIDLIAGGKS-KKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNK 59
M IDL G+ K+S KS ++Y KLL+KLY+FLVRRTDS F++ ILKRL S++NK
Sbjct: 1 MAIDLHKQGRVVKRSVVRQTKSTNVYHKLLIKLYKFLVRRTDSKFNQNILKRLSSSRLNK 60
Query: 60 PPMSLSRLTKFM-KGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 118
P+SLSR+ K + + ++++ V TVT+D R+ VP L V AL+FTETAR RI AGG+
Sbjct: 61 FPLSLSRIVKNLNETNKEQVIVSTSTVTNDERLLTVPKLTVCALKFTETARKRILAAGGK 120
Query: 119 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG 178
CLTFDQLAL+AP G N LLR PK +REA +H+G APG SH+ PYVRS+GRKFERA G
Sbjct: 121 CLTFDQLALKAPTGTNCFLLRAPK-SREAYRHWGKAPGQRGSHSAPYVRSEGRKFERAHG 179
>sp|P50885|RL18_TRYB2 60S ribosomal protein L18 OS=Trypanosoma brucei brucei (strain
927/4 GUTat10.1) GN=RPL18-A PE=2 SV=1
Length = 193
Score = 191 bits (486), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 137/190 (72%), Gaps = 9/190 (4%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MG+DL K K+ R S + Y+KLL+KLY+FL +RT+S F+K+I KRL S+ N+
Sbjct: 1 MGVDLTGVQKKKRVVRHHTYSTNPYIKLLIKLYKFLGKRTNSPFNKLIHKRLLKSRNNRA 60
Query: 61 PMSLSRLTKFM--------KGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARI 112
P+SLSR+ M KGK+ IAV+VG V DD+R+ +PAL++ ALRF+++AR RI
Sbjct: 61 PISLSRIAVCMRRRTVWLKKGKKSPIAVIVGDVLDDVRMTRIPALRICALRFSKSARERI 120
Query: 113 EKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRK 172
AGGECLTFDQLA+ AP G+NT+LLRG K+ RE+VKHFG A GVP SH KP+V S+G++
Sbjct: 121 TGAGGECLTFDQLAMMAPTGKNTMLLRGRKSGRESVKHFG-AAGVPGSHAKPHVSSRGKE 179
Query: 173 FERARGKRNS 182
+R+ +R++
Sbjct: 180 RQRSSKRRHA 189
>sp|Q54VZ4|RL18_DICDI 60S ribosomal protein L18 OS=Dictyostelium discoideum GN=rpl18 PE=1
SV=1
Length = 181
Score = 190 bits (482), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 97/167 (58%), Positives = 121/167 (72%), Gaps = 1/167 (0%)
Query: 12 KKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFM 71
+K+ R S + Y LLVKLYRFL RRT+S F+KV+LKRL +K N+PP+S+SR+ M
Sbjct: 11 RKTGRKTLVSQNPYHALLVKLYRFLARRTNSKFNKVVLKRLLQTKTNRPPVSISRIANLM 70
Query: 72 KG-KEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAP 130
K K KIAV VGTV DD R+ + P L V ALRFTETAR+RI KAGG+ L+FDQ AL P
Sbjct: 71 KDRKSGKIAVCVGTVVDDERLLDCPKLTVCALRFTETARSRIVKAGGKALSFDQFALVRP 130
Query: 131 LGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERAR 177
G NT L++G ARE KHFG APG+P SH +PYVRS+G KF+R++
Sbjct: 131 RGNNTFLIKGVTKAREVYKHFGRAPGLPGSHARPYVRSEGIKFQRSK 177
>sp|Q4DZP2|RL18_TRYCC 60S ribosomal protein L18 OS=Trypanosoma cruzi (strain CL Brener)
GN=RPL18 PE=3 SV=1
Length = 193
Score = 184 bits (466), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 128/180 (71%), Gaps = 9/180 (5%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MG+DL K K+ R S + Y+KLL+KLY+FL +RT+S F+K++ +RL S+ N+
Sbjct: 1 MGVDLTGVQKKKRVVRHHTYSTNPYIKLLIKLYKFLAQRTNSAFNKLVHQRLLKSRSNRA 60
Query: 61 PMSLSRLTKFMK--------GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARI 112
P+SLSR+ MK GK+ IAV+VG V DD+R+ +PAL+V ALRF+++AR RI
Sbjct: 61 PISLSRIAVCMKRKSVWLEKGKKAPIAVIVGDVLDDVRMARIPALRVCALRFSKSARERI 120
Query: 113 EKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRK 172
AGGECLTFDQLA+ AP G+NT LLRG K+ RE+VKHFG A GVP SH KP+ ++G++
Sbjct: 121 TGAGGECLTFDQLAMVAPTGKNTFLLRGRKSGRESVKHFG-AAGVPGSHAKPFTSNRGKE 179
>sp|Q4QG98|RL18_LEIMA 60S ribosomal protein L18 OS=Leishmania major GN=RPL18-A PE=3 SV=1
Length = 198
Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 135/196 (68%), Gaps = 15/196 (7%)
Query: 1 MGIDLIAGGKSKKSK--RTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVN 58
MG+DL G SKKS+ R S + Y+KLL+KLY+FL +RT S F+KV+ +RL S+ N
Sbjct: 1 MGVDLT--GISKKSRVIRHHTYSTNPYIKLLIKLYKFLAKRTSSGFNKVVYQRLIKSRSN 58
Query: 59 KPPMSLSRLTKFMK--------GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARA 110
+ P+SLSR+ MK K IAVVVG V DD+R+ +PA++V ALRF+++AR
Sbjct: 59 RAPISLSRIAVVMKRKAVFTAKSKAAPIAVVVGDVLDDVRMARIPAMRVCALRFSKSARQ 118
Query: 111 RIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 170
I AGGECLTFDQLA+ AP G+NT LLRG K+ RE+V+HFG A GVP SH+KPY ++G
Sbjct: 119 SIVAAGGECLTFDQLAMIAPTGKNTYLLRGRKSGRESVRHFG-ASGVPGSHSKPYATNRG 177
Query: 171 RKFERARGKRNSRGFR 186
+ E RG+R R ++
Sbjct: 178 K--ETKRGRRTGRSYK 191
>sp|Q95342|RL18_PIG 60S ribosomal protein L18 (Fragment) OS=Sus scrofa GN=RPL18 PE=3
SV=3
Length = 104
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/105 (62%), Positives = 82/105 (78%), Gaps = 3/105 (2%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP 60
MG+D I K +K +R PKS DIYL+LLVKL RFL RRT+S F++V+LKRLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLXRFLARRTNSTFNQVVLKRLFMSRTNRP 59
Query: 61 PMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALR 103
P+SLSR+ + MK G+E K AVVVGT+TDD+R EVP LKV ALR
Sbjct: 60 PLSLSRMXRKMKLPGREGKTAVVVGTITDDVRFQEVPKLKVCALR 104
>sp|P24558|RL18_SALSA 60S ribosomal protein L18 OS=Salmo salar GN=rpl18 PE=2 SV=1
Length = 179
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/171 (48%), Positives = 115/171 (67%), Gaps = 9/171 (5%)
Query: 1 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFL-VRRTDSNFDKVILKRLFMSKVNK 59
MGI +I K + + P S DI LLVK+YR + + + F+KV+L+RLFMS+ ++
Sbjct: 1 MGI-VIQHNKDRLVRPKQPLSEDI--TLLVKIYRLPGSKCSTAPFNKVVLRRLFMSRTHR 57
Query: 60 PPMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGG 117
PPMS+SR+ + MK G+E++ AVVVGTVTDD+R++E+P LKV+AL+ T R RI K
Sbjct: 58 PPMSVSRMIRKMKLPGRENRTAVVVGTVTDDVRIHEIPNLKVSALKITRRNRTRILKF-V 116
Query: 118 ECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRS 168
+ + F LAL AP Q +VLL P+NAR+ +HF AP +P HTKPYV S
Sbjct: 117 QIMRFVGLALAAPNRQKSVLLSAPRNARDVSRHFANAPSIP--HTKPYVLS 165
>sp|Q9V197|RL18E_PYRAB 50S ribosomal protein L18e OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rpl18e PE=3 SV=1
Length = 120
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 71/129 (55%), Gaps = 16/129 (12%)
Query: 15 KRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKP-----PMSLSRLTK 69
KRT P + L +L R+L R SN +KV + + ++ +P +++SR+ +
Sbjct: 2 KRTGPTDPN-----LRRLIRYL--RKKSNEEKVKIWKDIAWRLERPRRQRAEVNVSRINR 54
Query: 70 FMKGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRA 129
+ K+ + VV G+V ++ + + V A +F+ETAR +IE+AGGE +T ++L R
Sbjct: 55 Y--AKDGDMIVVPGSVLGAGKIEK--KVIVAAWKFSETARRKIEEAGGEAITIEELIKRN 110
Query: 130 PLGQNTVLL 138
P G +++
Sbjct: 111 PKGSGVIIM 119
>sp|Q5JJF5|RL18E_PYRKO 50S ribosomal protein L18e OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rpl18e PE=3 SV=1
Length = 121
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 6/124 (4%)
Query: 15 KRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMKGK 74
KRT P DI L+ L++ R K I RL + + +++S++ ++ K
Sbjct: 3 KRTGP--TDINLRRLIRTLRKKSNEEGVKIWKDIAWRLERPRRQRAEVNISKINRYTK-- 58
Query: 75 EDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQN 134
E + +V G+V R+ + V A +F+E AR +I +AGGE ++ ++L R P G
Sbjct: 59 EGDVVIVPGSVLGAGRLEH--KVVVAAWKFSEAARRKIIEAGGEAISIEELMERNPKGSG 116
Query: 135 TVLL 138
+++
Sbjct: 117 VIIM 120
>sp|B6YSQ4|RL18E_THEON 50S ribosomal protein L18e OS=Thermococcus onnurineus (strain NA1)
GN=rpl18e PE=3 SV=1
Length = 120
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 6/124 (4%)
Query: 15 KRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMKGK 74
KRT P DI L+ L++ R K I RL + + +++S++ ++ K
Sbjct: 2 KRTGP--TDINLRRLIRYLRKKSNEEGVKIWKDIAWRLERPRRQRAEVNVSKINRYTK-- 57
Query: 75 EDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQN 134
E +V G+V ++ + V A +F+ETA+ +I +AGGE +T ++L R P G
Sbjct: 58 EGDTVIVPGSVLGAGKLEH--KVVVAAWKFSETAKKKITEAGGEAITIEELIERNPKGSG 115
Query: 135 TVLL 138
+++
Sbjct: 116 VIIM 119
>sp|O59302|RL18E_PYRHO 50S ribosomal protein L18e OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rpl18e PE=3 SV=1
Length = 120
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 69/127 (54%), Gaps = 12/127 (9%)
Query: 15 KRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKV---ILKRLFMSKVNKPPMSLSRLTKFM 71
KRT P + L +L RFL ++++ K+ + RL + + +++S++ ++
Sbjct: 2 KRTGPTDPN-----LRRLIRFLKKKSNEEGVKIWKDLAWRLERPRRQRAEVNVSKINRY- 55
Query: 72 KGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPL 131
K+ + VV G+V ++ + + V A +F+ETAR +I +AGGE +T ++L R P
Sbjct: 56 -AKDGDMIVVPGSVLGAGKLEK--KVIVAAWKFSETARKKITEAGGEAITIEELIERNPK 112
Query: 132 GQNTVLL 138
G +++
Sbjct: 113 GSGVIIM 119
>sp|O26145|RL18E_METTH 50S ribosomal protein L18e OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rpl18e PE=3 SV=1
Length = 121
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 15/117 (12%)
Query: 29 LVKLYRFLVRRTDSN---FDKVILKRLFMSKVNKPPMSLSRLTKFMKGKEDKIAVVVGTV 85
L+KL R L +++ K + +RL N+ +++S++ + ED+ +V G V
Sbjct: 12 LIKLIRNLRKKSSQEGAAIWKDVARRLERPTRNRAAVNISKINRH--SDEDETVLVPGKV 69
Query: 86 TD----DIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLL 138
D RV +V AL F++TAR +IE+AGGECLT ++ P +N ++
Sbjct: 70 LGSGNLDHRV------QVVALSFSQTARDKIERAGGECLTLGKIVEENPAIKNIKII 120
>sp|Q8TVB7|RL18E_METKA 50S ribosomal protein L18e OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rpl18e PE=3 SV=1
Length = 127
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 74 KEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLG 132
+E++ +V G V D + + L+V A RF+ TAR +IE AGGECLT +L P G
Sbjct: 64 QEEETVLVPGKVLGDGVITQ--PLRVAAWRFSRTARMKIEAAGGECLTIRELLEENPEG 120
>sp|A7IAH4|RL18E_METB6 50S ribosomal protein L18e OS=Methanoregula boonei (strain 6A8)
GN=rpl18e PE=3 SV=1
Length = 121
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 9/126 (7%)
Query: 16 RTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMKGKE 75
RT K+N L L+ L + R ++ + I RL N ++LS++ ++ + E
Sbjct: 3 RTVEKTNP-RLTNLILLLKNTSRENEAKIWREIAGRLETPNRNYAEVNLSKINRYAQKGE 61
Query: 76 DKI--AVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQ 133
I V+G+ D ++++ AL F+E+A ++I A G+C+T +QL P G
Sbjct: 62 TIIVPGKVLGSGVLD------QSVRIAALNFSESATSKIRDAKGQCMTIEQLLKDNPKGS 115
Query: 134 NTVLLR 139
+LR
Sbjct: 116 GVRILR 121
>sp|Q2FTA2|RL18E_METHJ 50S ribosomal protein L18e OS=Methanospirillum hungatei (strain
JF-1 / DSM 864) GN=rpl18e PE=3 SV=1
Length = 121
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Query: 26 LKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMKGKEDKIAVVVGTV 85
L L++L + R + I RL S+ N +++S++ ++ +E + +V G V
Sbjct: 12 LAELIRLLKQTSRENEVEIWSDIASRLEKSRKNYAEVNVSKINRY--AQEGETLIVPGKV 69
Query: 86 TDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLR 139
V + V AL F++ A ++I +A G+C++ +QL + P G T +LR
Sbjct: 70 LGSGVVE--AGVTVAALSFSDAAVSKITEAKGQCISIEQLLSQNPKGSRTRILR 121
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,895,380
Number of Sequences: 539616
Number of extensions: 2447835
Number of successful extensions: 5947
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 5820
Number of HSP's gapped (non-prelim): 90
length of query: 187
length of database: 191,569,459
effective HSP length: 111
effective length of query: 76
effective length of database: 131,672,083
effective search space: 10007078308
effective search space used: 10007078308
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)