Query 029842
Match_columns 187
No_of_seqs 193 out of 1115
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 06:45:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029842.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029842hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vr3_A Acireductone dioxygenas 100.0 1.8E-52 6.2E-57 343.0 20.8 177 2-178 13-189 (191)
2 1zrr_A E-2/E-2' protein; nicke 100.0 1.2E-33 4E-38 229.3 8.0 156 9-169 7-174 (179)
3 3h8u_A Uncharacterized conserv 99.2 2.6E-11 8.8E-16 89.7 8.7 70 84-158 50-122 (125)
4 1v70_A Probable antibiotics sy 99.2 3.8E-11 1.3E-15 84.6 8.7 64 85-153 40-104 (105)
5 2b8m_A Hypothetical protein MJ 99.2 4.9E-11 1.7E-15 87.4 8.1 67 85-156 39-106 (117)
6 3fjs_A Uncharacterized protein 99.2 3.9E-11 1.3E-15 88.8 7.4 64 84-152 47-110 (114)
7 4i4a_A Similar to unknown prot 99.2 1.2E-10 3.9E-15 86.4 8.7 63 85-152 46-108 (128)
8 3ibm_A Cupin 2, conserved barr 99.1 2.9E-10 9.8E-15 89.8 10.9 65 84-153 67-132 (167)
9 2gu9_A Tetracenomycin polyketi 99.1 1.7E-10 5.7E-15 82.8 8.4 63 85-152 33-98 (113)
10 1vj2_A Novel manganese-contain 99.1 1.2E-10 4.2E-15 87.0 8.0 65 85-154 60-124 (126)
11 4e2g_A Cupin 2 conserved barre 99.1 1.6E-10 5.3E-15 85.4 8.2 62 85-152 53-114 (126)
12 2ozj_A Cupin 2, conserved barr 99.1 1E-10 3.4E-15 85.3 6.7 52 85-141 50-101 (114)
13 1x82_A Glucose-6-phosphate iso 99.1 5E-10 1.7E-14 90.1 11.0 68 86-153 86-156 (190)
14 1yhf_A Hypothetical protein SP 99.1 2.3E-10 7.9E-15 83.1 8.1 60 85-151 52-111 (115)
15 2pfw_A Cupin 2, conserved barr 99.1 3E-10 1E-14 82.6 8.3 60 86-152 47-106 (116)
16 3l2h_A Putative sugar phosphat 99.1 4.2E-10 1.4E-14 87.2 9.6 72 85-161 59-132 (162)
17 3kgz_A Cupin 2 conserved barre 99.1 3.5E-10 1.2E-14 88.8 9.2 66 85-155 56-121 (156)
18 3ht1_A REMF protein; cupin fol 99.1 2.4E-10 8.1E-15 85.9 7.9 64 85-153 51-116 (145)
19 1lr5_A Auxin binding protein 1 99.1 3.9E-10 1.4E-14 87.6 8.7 70 85-154 53-127 (163)
20 3jzv_A Uncharacterized protein 99.1 5E-10 1.7E-14 88.7 8.9 65 85-154 65-129 (166)
21 2oa2_A BH2720 protein; 1017534 99.1 7.5E-10 2.6E-14 84.9 9.6 69 85-153 55-125 (148)
22 3d82_A Cupin 2, conserved barr 99.1 2.5E-10 8.7E-15 80.7 6.2 51 85-140 41-92 (102)
23 2f4p_A Hypothetical protein TM 99.1 7.2E-10 2.5E-14 85.4 9.1 64 85-153 60-124 (147)
24 2o8q_A Hypothetical protein; c 99.1 4.8E-10 1.6E-14 83.9 7.9 62 85-152 55-118 (134)
25 2q30_A Uncharacterized protein 99.0 7.9E-10 2.7E-14 79.1 8.3 63 84-153 44-109 (110)
26 3cew_A Uncharacterized cupin p 99.0 1.5E-09 5.1E-14 80.4 8.3 61 88-153 42-103 (125)
27 1fi2_A Oxalate oxidase, germin 99.0 3.1E-09 1.1E-13 85.9 10.5 73 85-157 84-161 (201)
28 3i7d_A Sugar phosphate isomera 99.0 1.2E-09 4.1E-14 85.7 7.7 66 87-157 58-126 (163)
29 1o4t_A Putative oxalate decarb 99.0 1.8E-09 6E-14 81.6 8.2 59 86-149 70-129 (133)
30 2i45_A Hypothetical protein; n 99.0 7.2E-10 2.5E-14 80.0 5.7 48 87-139 41-90 (107)
31 2opk_A Hypothetical protein; p 99.0 1.9E-09 6.5E-14 79.5 7.8 60 88-152 48-110 (112)
32 3rns_A Cupin 2 conserved barre 98.9 2.1E-09 7.3E-14 88.3 8.3 63 83-152 47-109 (227)
33 3lwc_A Uncharacterized protein 98.9 2.4E-09 8.4E-14 80.3 7.5 64 86-158 53-116 (119)
34 2bnm_A Epoxidase; oxidoreducta 98.9 3.6E-09 1.2E-13 84.0 8.9 58 88-150 135-197 (198)
35 2fqp_A Hypothetical protein BP 98.9 2.2E-09 7.5E-14 76.6 6.8 59 86-149 31-92 (97)
36 1y9q_A Transcriptional regulat 98.9 3.6E-09 1.2E-13 83.9 8.0 59 88-152 121-179 (192)
37 4h7l_A Uncharacterized protein 98.9 3.1E-09 1.1E-13 84.2 7.3 60 85-153 57-119 (157)
38 1o5u_A Novel thermotoga mariti 98.9 5.7E-09 2E-13 76.3 8.1 47 88-140 45-92 (101)
39 3h7j_A Bacilysin biosynthesis 98.9 3.7E-09 1.3E-13 87.6 8.0 64 85-153 158-221 (243)
40 4b29_A Dimethylsulfoniopropion 98.9 4.7E-09 1.6E-13 87.1 8.5 66 83-154 142-208 (217)
41 3rns_A Cupin 2 conserved barre 98.9 4.5E-09 1.5E-13 86.3 8.3 61 84-150 164-224 (227)
42 1sef_A Conserved hypothetical 98.9 6.8E-09 2.3E-13 87.5 9.4 60 86-150 195-256 (274)
43 2vqa_A SLL1358 protein, MNCA; 98.8 1.5E-08 5.3E-13 87.6 10.6 69 85-153 64-133 (361)
44 2arc_A ARAC, arabinose operon 98.8 1.4E-08 4.9E-13 76.9 8.9 49 87-140 32-80 (164)
45 4e2q_A Ureidoglycine aminohydr 98.8 2E-08 6.9E-13 85.5 9.3 69 65-148 188-257 (266)
46 1j58_A YVRK protein; cupin, de 98.8 1.6E-08 5.4E-13 88.5 8.8 68 85-153 91-158 (385)
47 1y3t_A Hypothetical protein YX 98.8 1.7E-08 5.8E-13 85.9 8.7 64 84-153 229-293 (337)
48 2vqa_A SLL1358 protein, MNCA; 98.8 3.2E-08 1.1E-12 85.6 10.4 70 84-153 245-315 (361)
49 1dgw_A Canavalin; duplicated s 98.8 2.2E-08 7.6E-13 79.6 8.6 66 85-152 53-120 (178)
50 2d40_A Z3393, putative gentisa 98.8 8.4E-09 2.9E-13 90.6 6.6 62 84-150 111-173 (354)
51 1y3t_A Hypothetical protein YX 98.8 2.1E-08 7.1E-13 85.4 8.8 62 85-152 58-120 (337)
52 3nw4_A Gentisate 1,2-dioxygena 98.8 1.3E-08 4.5E-13 90.3 7.5 60 84-148 114-174 (368)
53 1rc6_A Hypothetical protein YL 98.7 2.4E-08 8.1E-13 83.4 8.1 60 85-149 191-252 (261)
54 1fxz_A Glycinin G1; proglycini 98.7 7.5E-08 2.6E-12 87.9 11.2 74 83-157 348-424 (476)
55 3h7j_A Bacilysin biosynthesis 98.7 2.9E-08 1E-12 82.1 7.7 61 84-149 45-106 (243)
56 1j58_A YVRK protein; cupin, de 98.7 5.2E-08 1.8E-12 85.2 9.6 69 85-153 269-338 (385)
57 1sfn_A Conserved hypothetical 98.7 6.2E-08 2.1E-12 80.6 9.4 71 64-148 166-236 (246)
58 3bu7_A Gentisate 1,2-dioxygena 98.7 3.7E-08 1.3E-12 88.1 8.5 62 83-149 304-366 (394)
59 1yfu_A 3-hydroxyanthranilate-3 98.7 5E-08 1.7E-12 78.3 8.4 56 84-140 46-101 (174)
60 3es1_A Cupin 2, conserved barr 98.7 4.2E-08 1.4E-12 78.6 7.8 76 64-155 80-156 (172)
61 2vpv_A Protein MIF2, MIF2P; nu 98.7 1.2E-07 4.2E-12 75.5 10.5 56 87-147 104-159 (166)
62 3c3v_A Arachin ARAH3 isoform; 98.7 7.8E-08 2.7E-12 88.5 10.6 75 83-158 382-459 (510)
63 2d5f_A Glycinin A3B4 subunit; 98.7 8.9E-08 3.1E-12 87.8 10.9 75 84-159 378-455 (493)
64 4axo_A EUTQ, ethanolamine util 98.7 4.9E-08 1.7E-12 76.7 7.8 61 90-158 81-141 (151)
65 2cav_A Protein (canavalin); vi 98.7 5.5E-08 1.9E-12 88.1 9.1 78 65-153 88-166 (445)
66 2xlg_A SLL1785 protein, CUCA; 98.7 2.5E-08 8.6E-13 83.5 6.3 66 85-150 55-137 (239)
67 3bu7_A Gentisate 1,2-dioxygena 98.7 4.8E-08 1.7E-12 87.3 8.3 61 83-148 133-195 (394)
68 1juh_A Quercetin 2,3-dioxygena 98.7 6.1E-08 2.1E-12 84.7 8.7 64 88-152 65-129 (350)
69 1sq4_A GLXB, glyoxylate-induce 98.7 6.3E-08 2.2E-12 82.2 8.3 58 87-149 84-141 (278)
70 1juh_A Quercetin 2,3-dioxygena 98.6 7.5E-08 2.5E-12 84.2 8.6 62 84-152 263-325 (350)
71 2ea7_A 7S globulin-1; beta bar 98.6 1.1E-07 3.7E-12 85.9 9.4 77 64-151 62-139 (434)
72 1uij_A Beta subunit of beta co 98.6 1.2E-07 3.9E-12 85.2 9.1 77 64-151 50-127 (416)
73 2pyt_A Ethanolamine utilizatio 98.6 1.3E-07 4.3E-12 72.3 7.8 53 92-151 74-126 (133)
74 1fxz_A Glycinin G1; proglycini 98.6 1.2E-07 4E-12 86.6 9.0 81 61-152 47-149 (476)
75 3bcw_A Uncharacterized protein 98.6 8.9E-08 3E-12 72.4 6.1 49 88-141 63-112 (123)
76 2e9q_A 11S globulin subunit be 98.6 1.6E-07 5.3E-12 85.5 8.8 82 61-153 62-164 (459)
77 2d5f_A Glycinin A3B4 subunit; 98.6 1.9E-07 6.6E-12 85.6 9.2 82 60-152 43-149 (493)
78 3d0j_A Uncharacterized protein 98.5 1.8E-07 6.2E-12 72.6 7.2 92 83-177 39-134 (140)
79 3qac_A 11S globulin SEED stora 98.5 2.3E-07 7.9E-12 84.5 8.9 82 61-153 49-167 (465)
80 2phl_A Phaseolin; plant SEED s 98.5 2.7E-07 9.2E-12 82.5 8.6 78 64-152 53-137 (397)
81 3c3v_A Arachin ARAH3 isoform; 98.5 2.5E-07 8.7E-12 85.1 8.7 83 60-153 46-163 (510)
82 1sq4_A GLXB, glyoxylate-induce 98.5 1.8E-07 6.2E-12 79.4 7.0 70 65-149 193-263 (278)
83 3fz3_A Prunin; TREE NUT allerg 98.5 6.8E-07 2.3E-11 82.5 10.9 74 84-158 405-481 (531)
84 1zvf_A 3-hydroxyanthranilate 3 98.5 7.4E-07 2.5E-11 71.5 9.2 58 84-141 45-105 (176)
85 1uij_A Beta subunit of beta co 98.4 1.1E-06 3.7E-11 78.8 10.6 68 84-153 260-342 (416)
86 2d40_A Z3393, putative gentisa 98.4 5.1E-07 1.8E-11 79.1 7.9 59 84-149 279-337 (354)
87 3lag_A Uncharacterized protein 98.4 2.3E-07 7.7E-12 67.1 4.4 64 84-149 28-92 (98)
88 2e9q_A 11S globulin subunit be 98.4 7.8E-07 2.7E-11 80.9 8.9 70 83-153 332-403 (459)
89 3ksc_A LEGA class, prolegumin; 98.4 8.2E-07 2.8E-11 81.5 8.9 70 84-153 57-147 (496)
90 1rc6_A Hypothetical protein YL 98.4 8.7E-07 3E-11 73.9 8.1 54 92-150 80-133 (261)
91 2phl_A Phaseolin; plant SEED s 98.4 1.2E-06 4.1E-11 78.3 9.4 68 84-153 250-325 (397)
92 3ksc_A LEGA class, prolegumin; 98.3 3.9E-06 1.3E-10 77.0 12.0 74 83-157 368-444 (496)
93 2o1q_A Putative acetyl/propion 98.3 3E-07 1E-11 70.9 3.9 76 65-154 46-121 (145)
94 1sef_A Conserved hypothetical 98.3 1.6E-06 5.3E-11 73.0 8.3 54 91-149 82-135 (274)
95 2ea7_A 7S globulin-1; beta bar 98.3 2.1E-06 7.1E-11 77.5 9.4 68 84-153 277-358 (434)
96 4e2q_A Ureidoglycine aminohydr 98.3 9.6E-07 3.3E-11 75.1 6.5 79 65-158 72-152 (266)
97 2ozi_A Hypothetical protein RP 98.3 5.8E-07 2E-11 65.2 4.1 63 85-149 29-92 (98)
98 3kgl_A Cruciferin; 11S SEED gl 98.3 3.1E-06 1E-10 77.2 9.7 74 83-157 333-409 (466)
99 3qac_A 11S globulin SEED stora 98.3 3.8E-06 1.3E-10 76.6 10.2 74 83-157 333-409 (465)
100 3s7i_A Allergen ARA H 1, clone 98.2 6.8E-06 2.3E-10 73.9 9.5 68 84-153 274-367 (418)
101 3gbg_A TCP pilus virulence reg 98.2 3E-06 1E-10 69.9 6.6 53 84-139 20-72 (276)
102 2cav_A Protein (canavalin); vi 98.1 1.2E-05 4.2E-10 72.7 10.6 69 83-153 291-371 (445)
103 3nw4_A Gentisate 1,2-dioxygena 98.1 5E-06 1.7E-10 73.7 7.3 52 84-140 290-341 (368)
104 2qnk_A 3-hydroxyanthranilate 3 98.1 1.1E-05 3.7E-10 69.1 8.9 59 84-144 42-101 (286)
105 3kgl_A Cruciferin; 11S SEED gl 98.1 1E-05 3.5E-10 73.7 8.9 70 84-153 54-182 (466)
106 3s7i_A Allergen ARA H 1, clone 98.1 1.7E-05 5.8E-10 71.3 9.7 71 84-155 55-128 (418)
107 2q1z_B Anti-sigma factor CHRR, 98.0 8.1E-06 2.8E-10 65.9 6.8 58 83-149 135-192 (195)
108 1sfn_A Conserved hypothetical 98.0 1.2E-05 4E-10 66.7 6.8 42 93-139 68-109 (246)
109 3ebr_A Uncharacterized RMLC-li 98.0 1.5E-05 5.1E-10 62.7 6.8 100 64-183 43-150 (159)
110 2y0o_A Probable D-lyxose ketol 97.9 1.9E-05 6.4E-10 63.4 6.2 60 83-142 63-145 (175)
111 3myx_A Uncharacterized protein 97.8 0.00012 4E-09 61.3 9.5 69 91-165 63-136 (238)
112 3cjx_A Protein of unknown func 97.7 2E-05 7E-10 62.4 3.8 60 65-140 45-104 (165)
113 3es4_A Uncharacterized protein 97.7 0.00012 4.2E-09 54.9 7.8 50 88-141 56-105 (116)
114 3fz3_A Prunin; TREE NUT allerg 97.7 6.2E-05 2.1E-09 69.5 7.0 34 118-151 174-207 (531)
115 3st7_A Capsular polysaccharide 97.5 0.00042 1.4E-08 59.0 9.7 66 84-149 283-352 (369)
116 3o14_A Anti-ecfsigma factor, C 97.5 0.00019 6.6E-09 59.2 6.6 64 66-149 46-109 (223)
117 3bal_A Acetylacetone-cleaving 97.0 0.0009 3.1E-08 52.5 5.2 62 64-138 47-108 (153)
118 3myx_A Uncharacterized protein 96.9 0.0019 6.6E-08 53.9 7.2 46 91-140 184-229 (238)
119 2pa7_A DTDP-6-deoxy-3,4-keto-h 96.8 0.0066 2.3E-07 46.8 8.5 68 84-154 46-115 (141)
120 2qnk_A 3-hydroxyanthranilate 3 96.6 0.006 2.1E-07 52.2 7.6 46 94-144 227-272 (286)
121 3ejk_A DTDP sugar isomerase; Y 96.3 0.037 1.3E-06 44.0 10.3 61 83-143 63-133 (174)
122 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 96.3 0.015 5E-07 46.7 7.8 60 83-142 58-128 (185)
123 3ryk_A DTDP-4-dehydrorhamnose 96.2 0.018 6.3E-07 47.0 8.2 60 83-142 80-151 (205)
124 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 96.1 0.02 6.9E-07 46.4 8.0 60 83-142 70-135 (197)
125 3eqe_A Putative cystein deoxyg 96.1 0.044 1.5E-06 43.3 9.8 71 84-154 80-155 (171)
126 2ixk_A DTDP-4-dehydrorhamnose 96.1 0.021 7.1E-07 45.8 7.9 60 83-142 59-129 (184)
127 1eyb_A Homogentisate 1,2-dioxy 95.9 0.016 5.4E-07 52.7 7.0 57 91-152 176-232 (471)
128 1dzr_A DTDP-4-dehydrorhamnose 95.8 0.03 1E-06 44.8 7.8 60 83-142 57-128 (183)
129 2gm6_A Cysteine dioxygenase ty 95.8 0.048 1.6E-06 44.2 8.8 72 83-154 89-169 (208)
130 2vec_A YHAK, pirin-like protei 95.7 0.051 1.7E-06 45.6 8.9 66 84-153 75-144 (256)
131 1yud_A Hypothetical protein SO 95.6 0.05 1.7E-06 43.2 8.1 73 84-158 60-139 (170)
132 3bb6_A Uncharacterized protein 95.5 0.14 4.9E-06 38.8 10.0 72 83-154 24-103 (127)
133 1wlt_A 176AA long hypothetical 95.2 0.086 2.9E-06 42.7 8.4 60 83-142 75-146 (196)
134 2c0z_A NOVW; isomerase, epimer 95.1 0.092 3.1E-06 43.1 8.3 60 83-142 65-136 (216)
135 1tq5_A Protein YHHW; bicupin, 94.7 0.16 5.3E-06 42.2 9.0 64 85-152 53-120 (242)
136 1oi6_A PCZA361.16; epimerase, 94.7 0.16 5.4E-06 41.3 8.8 60 83-142 57-128 (205)
137 3o14_A Anti-ecfsigma factor, C 94.4 0.041 1.4E-06 45.1 4.7 50 84-143 157-206 (223)
138 1upi_A DTDP-4-dehydrorhamnose 94.2 0.24 8.2E-06 40.9 8.9 60 83-142 76-147 (225)
139 3kmh_A D-lyxose isomerase; cup 94.0 0.083 2.8E-06 44.2 5.6 59 83-141 116-197 (246)
140 4gjz_A Lysine-specific demethy 93.8 0.15 5.3E-06 40.1 6.8 52 89-140 140-225 (235)
141 1qwr_A Mannose-6-phosphate iso 93.5 0.078 2.7E-06 45.6 4.9 24 117-140 159-182 (319)
142 2qjv_A Uncharacterized IOLB-li 93.5 0.15 5.2E-06 43.2 6.5 71 86-159 168-255 (270)
143 2p17_A Pirin-like protein; GK1 92.8 0.35 1.2E-05 40.8 7.8 64 85-152 51-117 (277)
144 3eln_A Cysteine dioxygenase ty 92.5 1.4 4.6E-05 35.4 10.6 72 83-154 80-161 (200)
145 3d8c_A Hypoxia-inducible facto 92.5 0.7 2.4E-05 39.9 9.4 68 86-153 196-299 (349)
146 2xdv_A MYC-induced nuclear ant 92.4 0.6 2E-05 41.9 9.1 55 86-140 153-223 (442)
147 4diq_A Lysine-specific demethy 92.3 0.64 2.2E-05 42.4 9.3 64 86-149 178-261 (489)
148 4hn1_A Putative 3-epimerase in 92.3 1.3 4.4E-05 35.9 10.1 60 83-142 54-125 (201)
149 1vrb_A Putative asparaginyl hy 91.6 0.76 2.6E-05 39.6 8.6 56 85-140 153-242 (342)
150 1qwr_A Mannose-6-phosphate iso 90.9 0.76 2.6E-05 39.3 7.8 37 92-133 268-304 (319)
151 3dl3_A Tellurite resistance pr 90.5 1.6 5.3E-05 32.6 8.3 61 93-154 38-101 (119)
152 1j1l_A Pirin; beta sandwich, c 90.1 0.81 2.8E-05 38.8 7.3 63 86-152 53-119 (290)
153 1dgw_X Canavalin; duplicated s 90.0 0.22 7.4E-06 34.4 2.9 28 84-111 47-75 (79)
154 3al5_A HTYW5, JMJC domain-cont 89.9 0.69 2.4E-05 39.6 6.8 66 87-154 181-277 (338)
155 1zx5_A Mannosephosphate isomer 89.4 1.1 3.9E-05 38.0 7.7 51 92-151 246-298 (300)
156 1zx5_A Mannosephosphate isomer 88.9 0.21 7.3E-06 42.5 2.8 48 93-140 117-182 (300)
157 2wfp_A Mannose-6-phosphate iso 88.6 0.97 3.3E-05 39.9 6.9 54 90-151 339-392 (394)
158 3uss_A Putative uncharacterize 88.6 4.9 0.00017 32.5 10.6 72 83-154 83-163 (211)
159 2oyz_A UPF0345 protein VPA0057 87.9 2 6.7E-05 30.8 6.8 46 93-141 41-86 (94)
160 1dgw_Y Canavalin; duplicated s 87.2 1.8 6.2E-05 30.8 6.4 36 116-153 6-41 (93)
161 2rg4_A Uncharacterized protein 86.3 1.1 3.9E-05 36.0 5.5 56 83-138 113-191 (216)
162 1pmi_A PMI, phosphomannose iso 86.0 2.1 7.3E-05 38.3 7.6 58 91-151 377-438 (440)
163 2wfp_A Mannose-6-phosphate iso 86.0 0.5 1.7E-05 41.8 3.5 23 117-139 241-263 (394)
164 3k2o_A Bifunctional arginine d 85.4 1.2 4.1E-05 38.5 5.5 38 115-153 255-292 (336)
165 2qdr_A Uncharacterized protein 82.2 1.8 6.2E-05 36.8 5.1 30 90-135 235-264 (303)
166 3kv4_A PHD finger protein 8; e 81.3 2.2 7.5E-05 38.4 5.7 46 96-141 256-326 (447)
167 1pmi_A PMI, phosphomannose iso 80.6 1.1 3.8E-05 40.2 3.5 24 117-140 267-290 (440)
168 2ypd_A Probable JMJC domain-co 80.5 1.8 6.2E-05 38.4 4.7 38 116-153 293-330 (392)
169 3eo6_A Protein of unknown func 80.2 3.5 0.00012 30.2 5.4 49 88-139 48-97 (106)
170 3hqx_A UPF0345 protein aciad03 80.0 6.3 0.00022 29.0 6.8 50 89-141 52-102 (111)
171 2yu1_A JMJC domain-containing 79.3 2.4 8.3E-05 38.2 5.3 28 114-141 264-291 (451)
172 3pua_A GRC5, PHD finger protei 79.2 1.7 5.8E-05 38.6 4.2 47 95-141 198-269 (392)
173 3k3o_A PHF8, PHD finger protei 79.2 1.9 6.4E-05 38.0 4.4 55 87-141 161-242 (371)
174 1ywk_A 4-deoxy-L-threo-5-hexos 78.5 4.8 0.00016 34.3 6.6 50 86-135 196-249 (289)
175 3pur_A Lysine-specific demethy 78.1 1.9 6.4E-05 39.7 4.2 58 84-141 307-391 (528)
176 1xru_A 4-deoxy-L-threo-5-hexos 77.6 6.9 0.00024 33.2 7.3 49 86-135 196-249 (282)
177 3kv5_D JMJC domain-containing 76.0 2.3 7.9E-05 38.6 4.2 56 86-141 279-361 (488)
178 3kv9_A JMJC domain-containing 74.9 2.7 9.1E-05 37.4 4.2 58 84-141 186-270 (397)
179 2xxz_A Lysine-specific demethy 74.7 4 0.00014 35.4 5.2 42 114-157 277-318 (332)
180 2pqq_A Putative transcriptiona 73.9 9.9 0.00034 26.5 6.5 58 93-150 46-107 (149)
181 4ask_A Lysine-specific demethy 72.7 4.2 0.00014 37.3 5.0 65 115-185 312-376 (510)
182 2fmy_A COOA, carbon monoxide o 69.4 18 0.00062 27.3 7.5 53 93-149 45-97 (220)
183 3mdp_A Cyclic nucleotide-bindi 69.1 9 0.00031 26.6 5.2 57 93-149 47-110 (142)
184 1yll_A PA5104, conserved hypot 66.6 7.7 0.00026 31.1 4.8 56 91-151 138-197 (200)
185 1ft9_A Carbon monoxide oxidati 66.6 20 0.00067 27.3 7.1 52 93-149 41-93 (222)
186 3idb_B CAMP-dependent protein 66.3 22 0.00076 25.4 7.1 56 93-149 79-138 (161)
187 3avr_A Lysine-specific demethy 65.7 7.7 0.00026 35.7 5.2 43 115-159 337-379 (531)
188 3dn7_A Cyclic nucleotide bindi 65.2 14 0.00047 27.4 5.8 57 93-149 48-109 (194)
189 3dv8_A Transcriptional regulat 64.9 23 0.0008 26.5 7.2 58 92-149 43-106 (220)
190 1xe7_A YML079WP, hypothetical 63.8 28 0.00096 28.0 7.7 54 86-139 93-152 (203)
191 3ryp_A Catabolite gene activat 63.3 24 0.00082 26.2 7.0 57 93-149 37-98 (210)
192 3loi_A Putative uncharacterize 63.0 45 0.0016 26.0 8.6 55 84-138 64-126 (172)
193 3iwz_A CAP-like, catabolite ac 62.7 23 0.00077 26.8 6.8 57 93-149 52-113 (230)
194 3b02_A Transcriptional regulat 62.2 20 0.00069 26.6 6.3 57 93-149 17-76 (195)
195 2qdr_A Uncharacterized protein 61.7 7.3 0.00025 33.1 3.9 52 88-149 106-159 (303)
196 1uhe_A Aspartate 1-decarboxyla 60.3 1.2 4.1E-05 32.2 -1.0 30 97-130 32-63 (97)
197 2a1x_A Phytanoyl-COA dioxygena 58.5 10 0.00035 31.1 4.3 46 113-158 213-261 (308)
198 3kcc_A Catabolite gene activat 58.1 31 0.0011 27.1 7.0 57 93-149 87-148 (260)
199 2bgc_A PRFA; bacterial infecti 57.9 54 0.0019 25.1 8.4 56 93-149 36-98 (238)
200 2oz6_A Virulence factor regula 55.4 43 0.0015 24.7 7.2 57 93-149 31-95 (207)
201 1o5l_A Transcriptional regulat 55.3 21 0.00073 27.0 5.5 57 93-149 40-101 (213)
202 3d0s_A Transcriptional regulat 55.2 27 0.00092 26.4 6.0 57 93-149 47-107 (227)
203 3opt_A DNA damage-responsive t 51.7 28 0.00097 30.5 6.2 54 114-169 303-356 (373)
204 4ev0_A Transcription regulator 51.5 29 0.001 25.8 5.7 57 93-149 40-100 (216)
205 2qjv_A Uncharacterized IOLB-li 51.4 80 0.0027 26.4 8.7 66 61-141 27-102 (270)
206 2rdq_A 1-deoxypentalenic acid 50.9 15 0.00051 29.6 4.1 40 113-152 208-253 (288)
207 3fx3_A Cyclic nucleotide-bindi 50.6 33 0.0011 26.1 5.9 57 93-149 52-112 (237)
208 3e6c_C CPRK, cyclic nucleotide 50.6 57 0.0019 25.1 7.4 35 93-127 50-85 (250)
209 3g7d_A PHPD; non heme Fe(II) d 50.2 48 0.0017 29.2 7.3 40 97-137 358-397 (443)
210 1zyb_A Transcription regulator 49.9 33 0.0011 26.2 5.8 57 93-149 61-122 (232)
211 3gyd_A CNMP-BD protein, cyclic 49.6 39 0.0013 25.1 6.1 34 93-126 80-114 (187)
212 3e97_A Transcriptional regulat 49.1 45 0.0015 25.2 6.5 57 93-149 47-107 (231)
213 4ava_A Lysine acetyltransferas 46.9 32 0.0011 27.9 5.6 57 93-149 54-113 (333)
214 3i3q_A Alpha-ketoglutarate-dep 46.8 16 0.00055 29.3 3.5 42 96-137 134-177 (211)
215 2zcw_A TTHA1359, transcription 44.8 34 0.0012 25.4 5.1 56 94-149 26-84 (202)
216 2z69_A DNR protein; beta barre 44.2 17 0.00058 25.5 3.0 57 93-149 53-114 (154)
217 2ptm_A Hyperpolarization-activ 43.4 37 0.0013 25.3 5.0 54 93-149 112-168 (198)
218 3r8s_R 50S ribosomal protein L 43.4 20 0.00068 25.8 3.3 22 104-130 3-24 (103)
219 3la7_A Global nitrogen regulat 43.4 45 0.0015 25.7 5.7 34 93-126 61-95 (243)
220 1vc3_B L-aspartate-alpha-decar 42.3 3 0.0001 30.0 -1.3 24 102-129 41-64 (96)
221 2opw_A Phyhd1 protein; double- 42.1 28 0.00095 28.1 4.4 39 114-152 226-267 (291)
222 2d93_A RAP guanine nucleotide 41.4 43 0.0015 23.0 4.9 53 93-149 58-114 (134)
223 2fct_A Syringomycin biosynthes 41.2 20 0.00067 29.4 3.3 26 114-139 218-243 (313)
224 3dxt_A JMJC domain-containing 40.2 40 0.0014 29.4 5.3 47 114-162 260-306 (354)
225 3plx_B Aspartate 1-decarboxyla 39.7 3.6 0.00012 29.9 -1.3 30 97-130 33-64 (102)
226 3pna_A CAMP-dependent protein 39.4 33 0.0011 24.3 4.1 53 93-149 79-134 (154)
227 3v2d_V 50S ribosomal protein L 38.8 23 0.0008 25.3 3.0 22 104-130 3-24 (101)
228 3oug_A Aspartate 1-decarboxyla 38.4 4.6 0.00016 29.8 -0.8 30 97-130 60-92 (114)
229 3bpz_A Potassium/sodium hyperp 38.0 33 0.0011 25.7 4.0 53 93-149 113-168 (202)
230 2gau_A Transcriptional regulat 37.9 39 0.0013 25.5 4.5 57 93-149 51-111 (232)
231 3m3i_A Putative uncharacterize 37.6 1.2E+02 0.0042 24.7 7.5 57 84-140 71-162 (225)
232 2ox0_A JMJC domain-containing 37.4 44 0.0015 29.3 5.2 45 114-160 278-322 (381)
233 2qcs_B CAMP-dependent protein 36.7 70 0.0024 25.0 6.0 34 93-126 198-233 (291)
234 3shr_A CGMP-dependent protein 35.4 72 0.0025 25.2 5.9 57 93-149 198-259 (299)
235 3tht_A Alkylated DNA repair pr 35.3 22 0.00077 30.6 2.9 38 97-134 227-264 (345)
236 1znp_A Hypothetical protein AT 34.9 1.5E+02 0.0052 22.6 7.5 57 83-139 50-114 (154)
237 2c45_A Aspartate 1-decarboxyla 32.8 6 0.0002 30.2 -1.0 26 102-131 65-90 (139)
238 3ocp_A PRKG1 protein; serine/t 32.5 50 0.0017 22.8 4.0 53 93-149 64-119 (139)
239 1o7f_A CAMP-dependent RAP1 gua 32.4 90 0.0031 26.5 6.3 57 93-149 83-144 (469)
240 1wgp_A Probable cyclic nucleot 32.3 10 0.00034 26.4 0.1 33 93-126 47-82 (137)
241 1pqh_A Aspartate 1-decarboxyla 31.9 5.3 0.00018 30.6 -1.5 30 97-130 74-106 (143)
242 1e5r_A Proline oxidase; oxidor 31.3 42 0.0014 28.4 3.9 42 101-147 130-172 (290)
243 1s4c_A Protein HI0227; double- 31.3 61 0.0021 24.2 4.5 52 88-139 62-135 (155)
244 2qfe_A Calpain-7; C2-like doma 30.9 32 0.0011 25.9 2.8 33 117-154 109-141 (148)
245 3gja_A CYTC3; halogenase, beta 30.2 18 0.00061 30.3 1.3 28 113-140 219-246 (319)
246 2vec_A YHAK, pirin-like protei 29.8 1.2E+02 0.0041 24.8 6.4 43 95-141 204-246 (256)
247 3h8q_A Thioredoxin reductase 3 29.4 74 0.0025 21.9 4.4 54 29-82 34-88 (114)
248 2lj0_A Sorbin and SH3 domain-c 29.0 24 0.00081 22.7 1.5 12 117-128 22-33 (65)
249 1aba_A Glutaredoxin; electron 28.7 1E+02 0.0035 19.8 4.8 53 29-81 21-82 (87)
250 1tq5_A Protein YHHW; bicupin, 28.6 1.5E+02 0.0052 23.8 6.8 38 95-141 183-220 (242)
251 3tnp_B CAMP-dependent protein 28.6 1E+02 0.0034 26.4 5.9 35 93-127 186-220 (416)
252 4f8a_A Potassium voltage-gated 27.9 1.5E+02 0.0052 20.4 7.5 53 93-149 68-125 (160)
253 1vp6_A CNBD, cyclic-nucleotide 27.6 55 0.0019 22.3 3.4 51 93-149 52-105 (138)
254 3ukn_A Novel protein similar t 27.0 1.6E+02 0.0054 21.9 6.3 53 93-149 116-173 (212)
255 2iuw_A Alkylated repair protei 27.0 69 0.0024 25.7 4.4 38 97-134 158-205 (238)
256 1xru_A 4-deoxy-L-threo-5-hexos 26.7 92 0.0032 26.2 5.2 42 93-139 79-121 (282)
257 2fi9_A Outer membrane protein; 26.7 26 0.00088 25.8 1.5 27 102-136 22-48 (128)
258 3of1_A CAMP-dependent protein 26.5 85 0.0029 23.6 4.7 31 93-126 166-196 (246)
259 2p17_A Pirin-like protein; GK1 26.2 1E+02 0.0035 25.4 5.3 51 94-154 189-244 (277)
260 1ywk_A 4-deoxy-L-threo-5-hexos 25.8 1.6E+02 0.0056 24.8 6.6 41 93-138 79-120 (289)
261 2fvt_A Conserved hypothetical 25.3 26 0.00088 26.2 1.3 27 102-136 20-46 (135)
262 3of1_A CAMP-dependent protein 25.1 65 0.0022 24.3 3.7 54 92-149 47-103 (246)
263 3kmh_A D-lyxose isomerase; cup 24.6 1.1E+02 0.0038 25.3 5.1 16 123-138 155-170 (246)
264 3ef4_A Pseudoazurin, blue copp 23.9 1.6E+02 0.0053 21.3 5.4 41 94-139 3-46 (124)
265 3dkw_A DNR protein; CRP-FNR, H 23.4 27 0.00094 26.2 1.2 57 93-149 50-111 (227)
266 2cyj_A Hypothetical protein PH 23.1 26 0.00088 25.5 0.9 24 102-133 7-30 (118)
267 3fz4_A Putative arsenate reduc 23.0 49 0.0017 23.7 2.4 44 29-72 20-64 (120)
268 3esg_A HUTD, putative uncharac 21.9 1.1E+02 0.0038 24.2 4.5 49 93-151 143-191 (193)
269 1ihn_A Hypothetical protein MT 21.7 30 0.001 25.0 1.1 24 102-133 8-31 (113)
270 2qcs_B CAMP-dependent protein 21.5 2.2E+02 0.0075 22.0 6.4 53 93-149 80-135 (291)
271 3s57_A Alpha-ketoglutarate-dep 21.0 50 0.0017 25.9 2.3 38 97-134 132-178 (204)
272 3cpk_A Uncharacterized protein 20.8 40 0.0014 25.8 1.6 28 101-136 17-45 (150)
273 3emr_A ECTD; double stranded b 20.5 27 0.00093 29.1 0.7 39 115-153 229-270 (310)
No 1
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=100.00 E-value=1.8e-52 Score=342.96 Aligned_cols=177 Identities=62% Similarity=1.148 Sum_probs=170.7
Q ss_pred ceEEEEecCCCCCCCCCCcCCCCCcCCHHHHhhcCeEEEEcCCCCCCChHHHHHHHHHcCCCeeeeeeeCcccccCHHHH
Q 029842 2 VLEAWFMDESSQDQRLPHHLNPKQFVSLDQLAELGVLYWRLNPKNYENDEELQKIREARGYSYMDLLDLCPEKVTNYEEK 81 (187)
Q Consensus 2 ~~~aw~~d~~~~d~~~~~~~~~~~~~~~~~L~~~GV~~w~~~~~~~~~~~~l~~l~~~~Gy~~~dvv~v~~~~~p~~~~~ 81 (187)
||||||||++++|+|+||+++|+++||+++|+++||+||+++++..+.+.+|++|++++||.+.|+++++++.+|+|+++
T Consensus 13 ~~~~~~~~~~~~d~~~ph~~~~~~~v~~~~L~~~GV~~w~~~~~~~~~~~~l~~l~~~~gy~~~D~v~~~p~~~p~~~~k 92 (191)
T 1vr3_A 13 MVQAWYMDESTADPRKPHRAQPDRPVSLEQLRTLGVLYWKLDADKYENDPELEKIRKMRNYSWMDIITICKDTLPNYEEK 92 (191)
T ss_dssp CCEEEEBCSCCSCTTSCCBCSSCCBCCHHHHHHTTCEEEECCGGGTTSCHHHHHHHHHHTCCEEEEEEESTTTSTTHHHH
T ss_pred hheeeeccCCccccCcccccCCCCccCHHHHHhcCcEEEECCCccccccHHHHHHHHhcCCCceeEEEECCCcCcchhhh
Confidence 99999999999999999999999999999999999999999987766789999999999999999999999867999999
Q ss_pred hcCcccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCceEEeCC
Q 029842 82 LKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNR 161 (187)
Q Consensus 82 ~~~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~~gw~~~~r 161 (187)
+..++.+|+|+++|++||++|+|+|.+++.+|+|+++.|++||+|+||+|++|+|.+++++++++||+|..++||+|++|
T Consensus 93 ~~~~~~~H~H~~~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~~~~~airlF~~~~~W~~~~r 172 (191)
T 1vr3_A 93 IKMFFEEHLHLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGEPVWTPYNR 172 (191)
T ss_dssp HHHHHSCEECSSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTTCCEEEEEEESSSCCCCCEES
T ss_pred hccCCcceECCcceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCCCCEEEEEEECCCCCccCCCC
Confidence 99999999999999999999999999998778999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHhhcC
Q 029842 162 PQEDHPARKEYIKGLTG 178 (187)
Q Consensus 162 ~~d~~~~r~~y~~~~~~ 178 (187)
++|++++|++||++|+.
T Consensus 173 ~~~~~~~r~~y~~~~~~ 189 (191)
T 1vr3_A 173 PADHFDARVQYMSFLEG 189 (191)
T ss_dssp CCTTSHHHHHHHHHHHH
T ss_pred chhccHHHHHHHHHhhh
Confidence 99999999999999863
No 2
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=100.00 E-value=1.2e-33 Score=229.26 Aligned_cols=156 Identities=24% Similarity=0.425 Sum_probs=133.2
Q ss_pred cCCCCCCCCCCcCCCCCcCCHHHHhhcCeEEEEcCCC-----CCCC-------hHHHHHHHHHcCCCeeeeeeeCccccc
Q 029842 9 DESSQDQRLPHHLNPKQFVSLDQLAELGVLYWRLNPK-----NYEN-------DEELQKIREARGYSYMDLLDLCPEKVT 76 (187)
Q Consensus 9 d~~~~d~~~~~~~~~~~~~~~~~L~~~GV~~w~~~~~-----~~~~-------~~~l~~l~~~~Gy~~~dvv~v~~~~~p 76 (187)
+++++..++....+++.+ +++|+++||+||+++++ +.+. +.+|++|++++||.+.|+++++++. |
T Consensus 7 ~~~~~~~~~~~~~~~~~i--~~~L~~~gV~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~l~~~~gy~~~D~i~~~~~~-p 83 (179)
T 1zrr_A 7 SVKDPQNSLWHSTNAEEI--QQQLNAKGVRFERWQADRDLGAAPTAETVIAAYQHAIDKLVAEKGYQSWDVISLRADN-P 83 (179)
T ss_dssp CSSCSSCEEEEECCSHHH--HHHHHHTTCCCCCCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHCCSEEEEECCCTTC-T
T ss_pred cCCCcCCcceeeCCHHHH--HHHHHHcCcEEEEcCCCCccCCcccHHHHHHHHHHHHHHHHHHhCCCcccEEEEcCCC-C
Confidence 444445555556667777 89999999999555442 1111 3579999999999999999999885 9
Q ss_pred CHHHHhcCcccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCce
Q 029842 77 NYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVW 156 (187)
Q Consensus 77 ~~~~~~~~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~~gw 156 (187)
++++++..|+.+|.|+++|++||++|+|.|.++ .+|+|+++.|++||+|+||+|++|+|.++++++++|||+|..++||
T Consensus 84 ~~~~~~~~~~~~H~H~~~Ei~~Vl~G~g~~~i~-~~d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~~~~w 162 (179)
T 1zrr_A 84 QKEALREKFLNEHTHGEDEVRFFVEGAGLFCLH-IGDEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNPEGW 162 (179)
T ss_dssp HHHHHHHHHHSCBEESSCEEEEEEESCCCCCEE-CSSCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECCGGGE
T ss_pred ChhHhhcccccceECChheEEEEEcceEEEEEE-eCCEEEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccCCCCc
Confidence 999999999999999999999999999999998 5678999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCcHHH
Q 029842 157 TAYNRPQEDHPAR 169 (187)
Q Consensus 157 ~~~~r~~d~~~~r 169 (187)
+|++| +++++.|
T Consensus 163 ~~~~~-g~~ia~~ 174 (179)
T 1zrr_A 163 IAQFT-GDDIASA 174 (179)
T ss_dssp ESCSS-CCCSGGG
T ss_pred cccCC-CchhHhh
Confidence 99888 5566655
No 3
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.24 E-value=2.6e-11 Score=89.75 Aligned_cols=70 Identities=13% Similarity=0.208 Sum_probs=59.7
Q ss_pred CcccccccC-cceEEEEeeceEEEEE-ecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC-CceEE
Q 029842 84 NFYTEHIHA-DEEIRYCLEGSGYFDV-RDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE-PVWTA 158 (187)
Q Consensus 84 ~~~~eH~H~-~~Ei~yileG~g~f~i-~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~-~gw~~ 158 (187)
.....|+|. .+|++||++|++.+.+ +++ .+.+++||+++||+|+.|++.+.++.++.++.++... ++|.+
T Consensus 50 ~~~~~H~H~~~~e~~~Vl~G~~~~~~~~~~-----~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v~~p~~~~~~~ 122 (125)
T 3h8u_A 50 QEIASHVHPHGQDTWTVISGEAEYHQGNGI-----VTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSVVAPGNAGFAL 122 (125)
T ss_dssp CEECCC-CTTCEEEEEEEECEEEEECSTTC-----EEEEETTEEEEECTTCCCEEEECSSSCEEEEEEEESTTCCCCC
T ss_pred CcCCcccCCCCeEEEEEEEeEEEEEECCCe-----EEEeCCCCEEEECCCCEEEeEeCCCCCEEEEEEECCCcccchh
Confidence 356799999 4999999999999999 777 8999999999999999999999888888888887764 55543
No 4
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.23 E-value=3.8e-11 Score=84.57 Aligned_cols=64 Identities=22% Similarity=0.327 Sum_probs=56.6
Q ss_pred cccccccCc-ceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 029842 85 FYTEHIHAD-EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 153 (187)
Q Consensus 85 ~~~eH~H~~-~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (187)
....|.|+. +|+.||++|++.+.++++ .+.+++||++++|+|+.|++.+.++....++.++...
T Consensus 40 ~~~~H~H~~~~e~~~v~~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~v~~p~ 104 (105)
T 1v70_A 40 AQKVHVHEGSDKVYYALEGEVVVRVGEE-----EALLAPGMAAFAPAGAPHGVRNESASPALLLVVTAPR 104 (105)
T ss_dssp EEEEECCSSCEEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTSCEEEECCSSSCEEEEEEEESC
T ss_pred cCCccCCCCCcEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEeCCC
Confidence 357899985 799999999999999987 8999999999999999999998777778888877654
No 5
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.20 E-value=4.9e-11 Score=87.42 Aligned_cols=67 Identities=12% Similarity=0.137 Sum_probs=58.5
Q ss_pred cccccccCcceEEEEeeceEEEEEecCCCcEEEE-EEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCce
Q 029842 85 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRI-WIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVW 156 (187)
Q Consensus 85 ~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~-~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~~gw 156 (187)
....|+|+..|+.||++|++.+.+++. .+ .+++||+++||+|+.|++.+.++..+..+.++...+.+
T Consensus 39 ~~~~H~H~~~e~~~Vl~G~~~~~i~~~-----~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i~~~~~~~ 106 (117)
T 2b8m_A 39 QMPKHYSNSYVHLIIIKGEMTLTLEDQ-----EPHNYKEGNIVYVPFNVKMLIQNINSDILEFFVVKAPHPKK 106 (117)
T ss_dssp BCCCEECSSCEEEEEEESEEEEEETTS-----CCEEEETTCEEEECTTCEEEEECCSSSEEEEEEEECSCGGG
T ss_pred cCCCEeCCCcEEEEEEeCEEEEEECCE-----EEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECCCCCC
Confidence 456899999999999999999999987 78 99999999999999999998877778888775555543
No 6
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.19 E-value=3.9e-11 Score=88.76 Aligned_cols=64 Identities=25% Similarity=0.292 Sum_probs=54.9
Q ss_pred CcccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 029842 84 NFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 152 (187)
Q Consensus 84 ~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~ 152 (187)
.....|+|+.+|++||++|++.+.++++ .+.+++||.|.||+|+.|++.+.++..+..+-+|..
T Consensus 47 ~~~~~H~H~~~e~~~Vl~G~~~~~i~~~-----~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~~v~p~ 110 (114)
T 3fjs_A 47 KQVGSHSVAGPSTIQCLEGEVEIGVDGA-----QRRLHQGDLLYLGAGAAHDVNAITNTSLLVTVVLVD 110 (114)
T ss_dssp CEEEEECCSSCEEEEEEESCEEEEETTE-----EEEECTTEEEEECTTCCEEEEESSSEEEEEEEECC-
T ss_pred CccCceeCCCcEEEEEEECEEEEEECCE-----EEEECCCCEEEECCCCcEEEEeCCCcEEEEEEEeCC
Confidence 4577899999999999999999999988 899999999999999999999987655555555544
No 7
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.16 E-value=1.2e-10 Score=86.37 Aligned_cols=63 Identities=19% Similarity=0.348 Sum_probs=55.4
Q ss_pred cccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 029842 85 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 152 (187)
Q Consensus 85 ~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~ 152 (187)
....|+|+..|+.||++|++.+.++++ .+.+++||+++||+|+.|++.+.++..+..+-++-+
T Consensus 46 ~~~~H~H~~~Ei~~v~~G~~~~~i~~~-----~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i~f~ 108 (128)
T 4i4a_A 46 KSFRHSHNEYELFIVIQGNAIIRINDE-----DFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTIWWD 108 (128)
T ss_dssp ECCCBCCSSEEEEEEEESEEEEEETTE-----EEEEETTCEEEECTTCCEEEEECSSSCEEEEEEEEC
T ss_pred ccCCEecCCeEEEEEEeCEEEEEECCE-----EEEECCCcEEEECCCCcEEeEeCCCCCEEEEEEEEC
Confidence 467899999999999999999999988 999999999999999999999877676766655433
No 8
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.15 E-value=2.9e-10 Score=89.83 Aligned_cols=65 Identities=9% Similarity=0.154 Sum_probs=58.6
Q ss_pred CcccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCC-CCcEEEEEEEcCC
Q 029842 84 NFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT-SNYVKLMRLFVGE 153 (187)
Q Consensus 84 ~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~-~~~~~~ir~f~~~ 153 (187)
.....|+|..+|++||++|++.+.++++ .+.+++||+|+||+|+.|++.+.+ +..+..+-++...
T Consensus 67 ~~~~~H~H~~~E~~~Vl~G~~~~~i~~~-----~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 67 GYTTLERHEHTHVVMVVRGHAEVVLDDR-----VEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp CBCCCBBCSSCEEEEEEESEEEEEETTE-----EEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred CCCCCccCCCcEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 3467899999999999999999999988 999999999999999999999877 7788888877665
No 9
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.14 E-value=1.7e-10 Score=82.80 Aligned_cols=63 Identities=17% Similarity=0.231 Sum_probs=55.7
Q ss_pred ccccc--ccC-cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 029842 85 FYTEH--IHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 152 (187)
Q Consensus 85 ~~~eH--~H~-~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~ 152 (187)
....| .|+ .+|+.||++|++.+.++++ .+.+++||+++||+|+.|++.+.++....++-++..
T Consensus 33 ~~~~h~~~H~~~~e~~~vl~G~~~~~~~~~-----~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v~~~ 98 (113)
T 2gu9_A 33 REGGPDNRHRGADQWLFVVDGAGEAIVDGH-----TQALQAGSLIAIERGQAHEIRNTGDTPLKTVNFYHP 98 (113)
T ss_dssp EEECCCSSSCCCEEEEEEEECCEEEEETTE-----EEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEES
T ss_pred ccCCcccccCCCcEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECC
Confidence 34567 998 8999999999999999988 899999999999999999999877777888777665
No 10
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.14 E-value=1.2e-10 Score=86.97 Aligned_cols=65 Identities=22% Similarity=0.211 Sum_probs=57.2
Q ss_pred cccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCC
Q 029842 85 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEP 154 (187)
Q Consensus 85 ~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~~ 154 (187)
....|+|+.+|+.||++|++.+.++++ .+.+++||++++|+|+.|++.+.++..+.++-++..++
T Consensus 60 ~~~~H~H~~~e~~~Vl~G~~~~~i~~~-----~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~v~~~~~ 124 (126)
T 1vj2_A 60 LIDRHSHPWEHEIFVLKGKLTVLKEQG-----EETVEEGFYIFVEPNEIHGFRNDTDSEVEFLCLIPKEG 124 (126)
T ss_dssp EEEEECCSSCEEEEEEESEEEEECSSC-----EEEEETTEEEEECTTCCEEEECCSSSCEEEEEEEEGGG
T ss_pred cCCceeCCCcEEEEEEEeEEEEEECCE-----EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEccCC
Confidence 356899999999999999999999988 89999999999999999999987777777777766543
No 11
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.13 E-value=1.6e-10 Score=85.44 Aligned_cols=62 Identities=21% Similarity=0.301 Sum_probs=55.6
Q ss_pred cccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 029842 85 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 152 (187)
Q Consensus 85 ~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~ 152 (187)
....|.|+.+|+.||++|++.+.++++ .+.+++||+++||+|+.|.+.+.++ ...++-+|..
T Consensus 53 ~~~~H~H~~~e~~~vl~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~~-~~~~l~v~~p 114 (126)
T 4e2g_A 53 EMPAHEHPHEQAGVMLEGTLELTIGEE-----TRVLRPGMAYTIPGGVRHRARTFED-GCLVLDIFSP 114 (126)
T ss_dssp EEEEECCSSEEEEEEEEECEEEEETTE-----EEEECTTEEEEECTTCCEEEECCTT-CEEEEEEEES
T ss_pred cCCCccCCCceEEEEEEeEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEECCC-CEEEEEEECC
Confidence 457899999999999999999999988 8999999999999999999998766 6777777764
No 12
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.12 E-value=1e-10 Score=85.34 Aligned_cols=52 Identities=17% Similarity=0.248 Sum_probs=47.8
Q ss_pred cccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCC
Q 029842 85 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS 141 (187)
Q Consensus 85 ~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~ 141 (187)
....|.|+.+|+.||++|++.+.++++ .+.+++||+++||+|+.|.+.+.++
T Consensus 50 ~~~~H~h~~~e~~~vl~G~~~~~i~~~-----~~~l~~Gd~i~i~~~~~H~~~~~~~ 101 (114)
T 2ozj_A 50 SVSEEEYFGDTLYLILQGEAVITFDDQ-----KIDLVPEDVLMVPAHKIHAIAGKGR 101 (114)
T ss_dssp SCCCBCCSSCEEEEEEEEEEEEEETTE-----EEEECTTCEEEECTTCCBEEEEEEE
T ss_pred ccccEECCCCeEEEEEeCEEEEEECCE-----EEEecCCCEEEECCCCcEEEEeCCC
Confidence 457899999999999999999999988 8999999999999999999998643
No 13
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.11 E-value=5e-10 Score=90.13 Aligned_cols=68 Identities=18% Similarity=0.264 Sum_probs=59.7
Q ss_pred ccccccCc---ceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 029842 86 YTEHIHAD---EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 153 (187)
Q Consensus 86 ~~eH~H~~---~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (187)
...|.|.. +|++||++|++.+.+++..++++.+.+++||+|+||+|+.|++.+.++.+++++-++...
T Consensus 86 ~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v~ip~g~~H~~~N~g~~~~~~l~v~~~~ 156 (190)
T 1x82_A 86 TKGHFHAKLDRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRTVNIGDEPFIFLAIYPAD 156 (190)
T ss_dssp CCCBBCSSTTCCEEEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEEEEEECSSSCEEEEEEEETT
T ss_pred CCCeECCCCCCCEEEEEEcCEEEEEEcCcCCcEEEEEECCCcEEEECCCCeEEEEECCcccEEEEEEECCC
Confidence 45788863 799999999999999988778888999999999999999999999877788888777654
No 14
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.11 E-value=2.3e-10 Score=83.07 Aligned_cols=60 Identities=22% Similarity=0.340 Sum_probs=51.7
Q ss_pred cccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEc
Q 029842 85 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFV 151 (187)
Q Consensus 85 ~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~ 151 (187)
....|.|+.+|+.||++|++.+.++++ .+.+++||+++||+|+.|++.+.++ .+++-++.
T Consensus 52 ~~~~H~H~~~e~~~vl~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~~~v~~ 111 (115)
T 1yhf_A 52 EIGRHSSPGDAMVTILSGLAEITIDQE-----TYRVAEGQTIVMPAGIPHALYAVEA--FQMLLVVV 111 (115)
T ss_dssp EEEEECCSSEEEEEEEESEEEEEETTE-----EEEEETTCEEEECTTSCEEEEESSC--EEEEEEEE
T ss_pred ccCCEECCCcEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCCEEEEECCC--ceEEEEEE
Confidence 466899999999999999999999988 8999999999999999999998764 44444443
No 15
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.10 E-value=3e-10 Score=82.57 Aligned_cols=60 Identities=23% Similarity=0.247 Sum_probs=53.0
Q ss_pred ccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 029842 86 YTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 152 (187)
Q Consensus 86 ~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~ 152 (187)
...|+|+.+|+.||++|++.+.++++ .+.+++||+++||+|+.|++.+.+ ...++-+|..
T Consensus 47 ~~~H~H~~~e~~~vl~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~v~~p 106 (116)
T 2pfw_A 47 GYVHAHRHSQVSYVVEGEFHVNVDGV-----IKVLTAGDSFFVPPHVDHGAVCPT--GGILIDTFSP 106 (116)
T ss_dssp EEEECCSSEEEEEEEEECEEEEETTE-----EEEECTTCEEEECTTCCEEEEESS--CEEEEEEEES
T ss_pred CCcEECCcceEEEEEeeEEEEEECCE-----EEEeCCCCEEEECcCCceeeEeCC--CcEEEEEECC
Confidence 56899999999999999999999887 899999999999999999999876 4566666654
No 16
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.10 E-value=4.2e-10 Score=87.19 Aligned_cols=72 Identities=19% Similarity=0.241 Sum_probs=63.6
Q ss_pred ccccccc-CcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCC-CeeeeeeCCCCcEEEEEEEcCCCceEEeCC
Q 029842 85 FYTEHIH-ADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAG-IYHRFTLDTSNYVKLMRLFVGEPVWTAYNR 161 (187)
Q Consensus 85 ~~~eH~H-~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g-~~H~f~~~~~~~~~~ir~f~~~~gw~~~~r 161 (187)
....|+| ..+|++||++|++.+.++++ .+.+++||+++||+| +.|++.+.++..+.++-++...+.-+..+.
T Consensus 59 ~~~~H~H~~~~E~~~Vl~G~~~~~~~~~-----~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l~v~~p~~~~~~~~p 132 (162)
T 3l2h_A 59 STEYHLHHYEEEAVYVLSGKGTLTMEND-----QYPIAPGDFVGFPCHAAAHSISNDGTETLVCLVIGQRLDQDVVDYP 132 (162)
T ss_dssp SSSSBEESSCCEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTSCCEEEECCSSSCEEEEEEEECCSEEEEEET
T ss_pred CCCCccCCCCCEEEEEEEEEEEEEECCE-----EEEeCCCCEEEECCCCceEEeEeCCCCCEEEEEEECCCCCCeEecC
Confidence 3678999 68999999999999999988 899999999999998 999999988888999999888876655443
No 17
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.10 E-value=3.5e-10 Score=88.77 Aligned_cols=66 Identities=18% Similarity=0.271 Sum_probs=59.7
Q ss_pred cccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCc
Q 029842 85 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPV 155 (187)
Q Consensus 85 ~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~~g 155 (187)
....|+|+.+|++||++|++.+.++++ .+.+++||+++||+|+.|.+.+.++.++..+.++.....
T Consensus 56 ~~~~H~H~~~E~~~Vl~G~~~v~v~g~-----~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i~~~~~d 121 (156)
T 3kgz_A 56 YSTLERHAHVHAVMIHRGHGQCLVGET-----ISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCVVNAARD 121 (156)
T ss_dssp ECCCBBCSSCEEEEEEEEEEEEEETTE-----EEEEETTCEEEECTTCCEEEECCSSSCEEEEEEEESSCC
T ss_pred ccCceeCCCcEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEeCCCC
Confidence 457899999999999999999999988 999999999999999999999988888888888877653
No 18
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.09 E-value=2.4e-10 Score=85.93 Aligned_cols=64 Identities=23% Similarity=0.258 Sum_probs=57.7
Q ss_pred cccccccCcceEEEEeeceEEEE--EecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 029842 85 FYTEHIHADEEIRYCLEGSGYFD--VRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 153 (187)
Q Consensus 85 ~~~eH~H~~~Ei~yileG~g~f~--i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (187)
....|+|+..|+.||++|++.+. ++++ .+.+++||+++||+|+.|++.+.++..+.++-++...
T Consensus 51 ~~~~H~H~~~e~~~vl~G~~~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~i~~~~ 116 (145)
T 3ht1_A 51 STPPHFHEWEHEIYVLEGSMGLVLPDQGR-----TEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVAPCE 116 (145)
T ss_dssp ECCCEECSSCEEEEEEEECEEEEEGGGTE-----EEEECTTCEEEECTTCCBEEECCTTCCEEEEEEEESC
T ss_pred cCCCccCCCceEEEEEEeEEEEEEeECCE-----EEEECCCCEEEECCCCeEEeEcCCCCCEEEEEEECCC
Confidence 46789999999999999999999 9887 8999999999999999999999887788888877655
No 19
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.08 E-value=3.9e-10 Score=87.57 Aligned_cols=70 Identities=19% Similarity=0.161 Sum_probs=58.1
Q ss_pred cccccccCcceEEEEeeceEEEEEecCC----CcEEEEEEeCCCEEEeCCCCeeeeeeCC-CCcEEEEEEEcCCC
Q 029842 85 FYTEHIHADEEIRYCLEGSGYFDVRDES----DQWIRIWIKAGDLIVLPAGIYHRFTLDT-SNYVKLMRLFVGEP 154 (187)
Q Consensus 85 ~~~eH~H~~~Ei~yileG~g~f~i~~~~----d~~~~~~v~~GDlIiIP~g~~H~f~~~~-~~~~~~ir~f~~~~ 154 (187)
....|.|...|++||++|++.+.+++.+ ++.-.+.+++||++.||+|+.|++.+.+ +.++.++-++...+
T Consensus 53 ~~~~H~H~~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~~ 127 (163)
T 1lr5_A 53 RTPIHRHSCEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVLVIISRPP 127 (163)
T ss_dssp BCCEEEESSCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEEEEEEEESSS
T ss_pred cCCCeECCCCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEEEEEEECCCC
Confidence 4578999999999999999999999811 1112899999999999999999999877 77888887776654
No 20
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.06 E-value=5e-10 Score=88.74 Aligned_cols=65 Identities=18% Similarity=0.203 Sum_probs=58.7
Q ss_pred cccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCC
Q 029842 85 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEP 154 (187)
Q Consensus 85 ~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~~ 154 (187)
....|+|...|++||++|++.+.++++ .+.+++||+|+||+|+.|.+.+..+.++..+-++....
T Consensus 65 ~~~~H~H~~~E~~~Vl~G~~~~~v~g~-----~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i~~~~~ 129 (166)
T 3jzv_A 65 HSTLERHQHAHGVMILKGRGHAMVGRA-----VSAVAPYDLVTIPGWSWHQFRAPADEALGFLCMVNAER 129 (166)
T ss_dssp ECCCBBCSSCEEEEEEEECEEEEETTE-----EEEECTTCEEEECTTCCEEEECCTTSCEEEEEEEESSC
T ss_pred ccCceeCCCcEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEccCC
Confidence 467899999999999999999999988 99999999999999999999998888888888877653
No 21
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.06 E-value=7.5e-10 Score=84.93 Aligned_cols=69 Identities=19% Similarity=0.254 Sum_probs=57.9
Q ss_pred cccccccC-cceEEEEeeceEEEEEecCCC-cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 029842 85 FYTEHIHA-DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 153 (187)
Q Consensus 85 ~~~eH~H~-~~Ei~yileG~g~f~i~~~~d-~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (187)
....|.|+ .+|++||++|++.+.+++..+ .++++.+++||+|+||+|+.|++.+.++..+.++-++...
T Consensus 55 ~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~i~~~~ 125 (148)
T 2oa2_A 55 DIGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYSIYAPP 125 (148)
T ss_dssp BCCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEEEESC
T ss_pred ccCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEEEECCC
Confidence 45789998 569999999999999998732 2455999999999999999999998777778888777654
No 22
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=99.05 E-value=2.5e-10 Score=80.71 Aligned_cols=51 Identities=31% Similarity=0.536 Sum_probs=47.3
Q ss_pred cccccccCc-ceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCC
Q 029842 85 FYTEHIHAD-EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT 140 (187)
Q Consensus 85 ~~~eH~H~~-~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~ 140 (187)
....|+|+. +|+.||++|++.+.++++ .+.+++||+++||+|+.|++.+.+
T Consensus 41 ~~~~H~H~~~~e~~~v~~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~ 92 (102)
T 3d82_A 41 EFVWHEHADTDEVFIVMEGTLQIAFRDQ-----NITLQAGEMYVIPKGVEHKPMAKE 92 (102)
T ss_dssp ECCCBCCTTCCEEEEEEESEEEEECSSC-----EEEEETTEEEEECTTCCBEEEEEE
T ss_pred CCCceeCCCCcEEEEEEeCEEEEEECCE-----EEEEcCCCEEEECCCCeEeeEcCC
Confidence 367899997 999999999999999988 899999999999999999998864
No 23
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.05 E-value=7.2e-10 Score=85.41 Aligned_cols=64 Identities=17% Similarity=0.292 Sum_probs=57.5
Q ss_pred cccccccCcceEEEEeeceEEEEEecCCCcEEE-EEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 029842 85 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIR-IWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 153 (187)
Q Consensus 85 ~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~-~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (187)
....|.|+..|+.||++|++.+.++++ . +.+++||+++||+|+.|++.+..+..+.++.++...
T Consensus 60 ~~~~H~H~~~E~~~Vl~G~~~~~~~~~-----~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~~~ 124 (147)
T 2f4p_A 60 RTHWHSHPGGQILIVTRGKGFYQERGK-----PARILKKGDVVEIPPNVVHWHGAAPDEELVHIGISTQV 124 (147)
T ss_dssp EECSEECTTCEEEEEEEEEEEEEETTS-----CCEEEETTCEEEECTTCCEEEEEBTTBCEEEEEEECCG
T ss_pred ccCceECCCceEEEEEeCEEEEEECCE-----EEEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEccC
Confidence 356899999999999999999999987 7 899999999999999999999887788888887663
No 24
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.05 E-value=4.8e-10 Score=83.89 Aligned_cols=62 Identities=23% Similarity=0.340 Sum_probs=52.3
Q ss_pred cccccccCc-ceEEEEeeceEEEEEec-CCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 029842 85 FYTEHIHAD-EEIRYCLEGSGYFDVRD-ESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 152 (187)
Q Consensus 85 ~~~eH~H~~-~Ei~yileG~g~f~i~~-~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~ 152 (187)
....|+|+. +|++||++|++.+.+++ + .+.+++||+++||+|+.|++.+.++. ..++-++..
T Consensus 55 ~~~~H~H~~~~E~~~vl~G~~~~~~~~~~-----~~~l~~Gd~~~ip~g~~H~~~~~~~~-~~~l~~~~p 118 (134)
T 2o8q_A 55 KPTWHTHTVGFQLFYVLRGWVEFEYEDIG-----AVMLEAGGSAFQPPGVRHRELRHSDD-LEVLEIVSP 118 (134)
T ss_dssp -CCCEEECCSCEEEEEEESEEEEEETTTE-----EEEEETTCEEECCTTCCEEEEEECTT-CEEEEEESS
T ss_pred CCCCEECCCCcEEEEEEeCEEEEEECCcE-----EEEecCCCEEEECCCCcEEeEeCCCC-eEEEEEECC
Confidence 357899997 99999999999999998 7 89999999999999999999985543 466655554
No 25
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=99.04 E-value=7.9e-10 Score=79.15 Aligned_cols=63 Identities=25% Similarity=0.251 Sum_probs=53.4
Q ss_pred CcccccccCc-ceE-EEEeeceEEEEEe-cCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 029842 84 NFYTEHIHAD-EEI-RYCLEGSGYFDVR-DESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 153 (187)
Q Consensus 84 ~~~~eH~H~~-~Ei-~yileG~g~f~i~-~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (187)
.....|.|+. .|+ .||++|++.+.++ ++ .+.+++||+++||+|+.|++.+.++ ..++-+|...
T Consensus 44 ~~~~~H~H~~~~e~~~~vl~G~~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~l~~~~p~ 109 (110)
T 2q30_A 44 QELPVHSHNIEGELNIVVLEGEGEFVGDGDA-----VIPAPRGAVLVAPISTPHGVRAVTD--MKVLVTIAPP 109 (110)
T ss_dssp CEEEEECCSSSCEEEEEEEESCEEEECGGGC-----EEEECTTEEEEEETTSCEEEEESSS--EEEEEEEESC
T ss_pred CcCCcccCCCCccEEEEEEeCEEEEEeCCCE-----EEEECCCCEEEeCCCCcEEEEEcCC--cEEEEEECCC
Confidence 3467899985 788 8999999999998 67 8999999999999999999998765 5667777654
No 26
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=98.99 E-value=1.5e-09 Score=80.37 Aligned_cols=61 Identities=21% Similarity=0.372 Sum_probs=51.6
Q ss_pred ccccCcce-EEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 029842 88 EHIHADEE-IRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 153 (187)
Q Consensus 88 eH~H~~~E-i~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (187)
.|+|+..| ++||++|++.+.++++ .+.+++||+++||+|+.|++.+.++..+.++-++...
T Consensus 42 ~H~H~~~e~~~~vl~G~~~~~i~~~-----~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~~~i~~~~ 103 (125)
T 3cew_A 42 VHSHKQNEEIYGILSGKGFITIDGE-----KIELQAGDWLRIAPDGKRQISAASDSPIGFLCIQVKA 103 (125)
T ss_dssp EEEESSEEEEEEEEEEEEEEEETTE-----EEEEETTEEEEECTTCCEEEEEBTTBCEEEEEEEEET
T ss_pred CccCCCceEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCcEEEEcCCCCCEEEEEEEcCC
Confidence 79999765 5559999999999988 8999999999999999999998766667766665443
No 27
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=98.97 E-value=3.1e-09 Score=85.87 Aligned_cols=73 Identities=19% Similarity=0.263 Sum_probs=61.5
Q ss_pred cccccccCc-ceEEEEeeceEEEEEecCC---CcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC-CceE
Q 029842 85 FYTEHIHAD-EEIRYCLEGSGYFDVRDES---DQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE-PVWT 157 (187)
Q Consensus 85 ~~~eH~H~~-~Ei~yileG~g~f~i~~~~---d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~-~gw~ 157 (187)
....|+|+. +|+.||++|++.+.+.+.+ ++.+...+++||+++||+|+.|++.+.++....++-+|... +|..
T Consensus 84 ~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~p~~~ 161 (201)
T 1fi2_A 84 TNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPGIV 161 (201)
T ss_dssp EEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSSCCCCE
T ss_pred CCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCCCeE
Confidence 467899995 7999999999999997554 67788999999999999999999998777788888887654 4433
No 28
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=98.97 E-value=1.2e-09 Score=85.71 Aligned_cols=66 Identities=23% Similarity=0.246 Sum_probs=59.0
Q ss_pred cccccCc-ceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCC--CeeeeeeCCCCcEEEEEEEcCCCceE
Q 029842 87 TEHIHAD-EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAG--IYHRFTLDTSNYVKLMRLFVGEPVWT 157 (187)
Q Consensus 87 ~eH~H~~-~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g--~~H~f~~~~~~~~~~ir~f~~~~gw~ 157 (187)
..|+|.. +|++||++|++.+.++++ .+.+++||+|+||+| +.|++.+.++..++++-++...+.=+
T Consensus 58 ~~H~H~~~eE~~~Vl~G~~~~~~~~~-----~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~~~l~v~~p~~~d~ 126 (163)
T 3i7d_A 58 LRHYHMEQDEFVMVTEGALVLVDDQG-----EHPMVPGDCAAFPAGDPNGHQFVNRTDAPATFLVVGTRTPTET 126 (163)
T ss_dssp SSEEESSCCEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTCCCCBEEECCSSSCEEEEEEEECCSCEE
T ss_pred CCccCCCCcEEEEEEECEEEEEECCE-----EEEeCCCCEEEECCCCCcceEEEECCCCCEEEEEEECCCCCCc
Confidence 6899987 799999999999999988 899999999999999 99999998878888888877766433
No 29
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.97 E-value=1.8e-09 Score=81.56 Aligned_cols=59 Identities=27% Similarity=0.378 Sum_probs=52.4
Q ss_pred ccccccC-cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEE
Q 029842 86 YTEHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 86 ~~eH~H~-~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~ 149 (187)
...|.|. .+|+.||++|++.+.++++ .+.+++||++++|+|+.|++.+.++..+.++-+
T Consensus 70 ~~~H~H~~~~E~~~Vl~G~~~~~i~~~-----~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l~v 129 (133)
T 1o4t_A 70 VGLHKHEGEFEIYYILLGEGVFHDNGK-----DVPIKAGDVCFTDSGESHSIENTGNTDLEFLAV 129 (133)
T ss_dssp EEEEECCSEEEEEEEEESEEEEEETTE-----EEEEETTEEEEECTTCEEEEECCSSSCEEEEEE
T ss_pred cCceECCCccEEEEEEeCEEEEEECCE-----EEEeCCCcEEEECCCCcEEeEECCCCCEEEEEE
Confidence 4689997 6999999999999999988 899999999999999999999877666666554
No 30
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=98.96 E-value=7.2e-10 Score=80.00 Aligned_cols=48 Identities=25% Similarity=0.468 Sum_probs=43.6
Q ss_pred cccccCc-ceEEEEeeceEEEEEec-CCCcEEEEEEeCCCEEEeCCCCeeeeeeC
Q 029842 87 TEHIHAD-EEIRYCLEGSGYFDVRD-ESDQWIRIWIKAGDLIVLPAGIYHRFTLD 139 (187)
Q Consensus 87 ~eH~H~~-~Ei~yileG~g~f~i~~-~~d~~~~~~v~~GDlIiIP~g~~H~f~~~ 139 (187)
..|+|+. +|+.||++|++.+.+++ + .+.+++||+++||+|+.|++.+.
T Consensus 41 ~~H~H~~~~E~~~Vl~G~~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~ 90 (107)
T 2i45_A 41 GWHTHGYSDKVLFAVEGDMAVDFADGG-----SMTIREGEMAVVPKSVSHRPRSE 90 (107)
T ss_dssp CCBCC--CCEEEEESSSCEEEEETTSC-----EEEECTTEEEEECTTCCEEEEEE
T ss_pred cceeCCCCCEEEEEEeCEEEEEECCCc-----EEEECCCCEEEECCCCcEeeEeC
Confidence 4899997 99999999999999998 7 89999999999999999999885
No 31
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=98.96 E-value=1.9e-09 Score=79.50 Aligned_cols=60 Identities=15% Similarity=0.207 Sum_probs=50.3
Q ss_pred ccccCcceEEEEeeceEEEEEecCCCcEEE--EEEeCCCEEEeCCCCeeeeeeCCC-CcEEEEEEEcC
Q 029842 88 EHIHADEEIRYCLEGSGYFDVRDESDQWIR--IWIKAGDLIVLPAGIYHRFTLDTS-NYVKLMRLFVG 152 (187)
Q Consensus 88 eH~H~~~Ei~yileG~g~f~i~~~~d~~~~--~~v~~GDlIiIP~g~~H~f~~~~~-~~~~~ir~f~~ 152 (187)
+|.|+.+|+.||++|++.+.++++ . +.+++||.|.||+|+.|++.+.++ .....+-+|..
T Consensus 48 ~~~~~~~E~~~Vl~G~~~l~~~~~-----~~~~~l~~Gd~i~ipa~~~H~~~n~~~~~~~~~l~v~~~ 110 (112)
T 2opk_A 48 WYDSPQDEWVMVVSGSAGIECEGD-----TAPRVMRPGDWLHVPAHCRHRVAWTDGGEPTVWLAVHCD 110 (112)
T ss_dssp CBCCSSEEEEEEEESCEEEEETTC-----SSCEEECTTEEEEECTTCCEEEEEECSSSCEEEEEEEEC
T ss_pred cccCCccEEEEEEeCeEEEEECCE-----EEEEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEEe
Confidence 366889999999999999999987 7 999999999999999999987654 35555666543
No 32
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.94 E-value=2.1e-09 Score=88.30 Aligned_cols=63 Identities=17% Similarity=0.285 Sum_probs=55.3
Q ss_pred cCcccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 029842 83 KNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 152 (187)
Q Consensus 83 ~~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~ 152 (187)
+.....|.|+.+|+.||++|++.|.++++ ...+++||++++|+|++|.+.+.++ ++++-++..
T Consensus 47 G~~~~~h~h~~~~~~~Vl~G~~~~~i~~~-----~~~l~~Gd~~~~p~~~~H~~~a~~~--~~~l~i~~~ 109 (227)
T 3rns_A 47 DEEITAEAMLGNRYYYCFNGNGEIFIENN-----KKTISNGDFLEITANHNYSIEARDN--LKLIEIGEK 109 (227)
T ss_dssp TCEEEECSCSSCEEEEEEESEEEEEESSC-----EEEEETTEEEEECSSCCEEEEESSS--EEEEEEEEC
T ss_pred CCccCccccCCCEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCCEEEEECCC--cEEEEEEee
Confidence 46789999999999999999999999988 8999999999999999999998764 556555443
No 33
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=98.92 E-value=2.4e-09 Score=80.27 Aligned_cols=64 Identities=19% Similarity=0.292 Sum_probs=49.2
Q ss_pred ccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCceEE
Q 029842 86 YTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTA 158 (187)
Q Consensus 86 ~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~~gw~~ 158 (187)
..+|. +.+|++|||+|++.+.++++ .+.+++||.|.||+|+.|++.+.+ ...+++-+.. |.|..
T Consensus 53 ~~~H~-~~~E~~~Vl~G~~~~~~~g~-----~~~l~~GD~v~ip~g~~H~~~~~~-~~~~~l~v~~--P~w~~ 116 (119)
T 3lwc_A 53 LTETM-AVDDVMIVLEGRLSVSTDGE-----TVTAGPGEIVYMPKGETVTIRSHE-EGALTAYVTY--PHWRP 116 (119)
T ss_dssp EEEEC-SSEEEEEEEEEEEEEEETTE-----EEEECTTCEEEECTTCEEEEEEEE-EEEEEEEEEE--CC---
T ss_pred cCccC-CCCEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCEEEEEcCC-CCeEEEEEEC--CCCcc
Confidence 45565 78999999999999999877 899999999999999999998764 3444444443 44864
No 34
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=98.92 E-value=3.6e-09 Score=84.00 Aligned_cols=58 Identities=22% Similarity=0.311 Sum_probs=52.1
Q ss_pred ccccCcceEEEEeeceEEEEEec----CCCcEEEEEEeCCCEEEeCCCCeeeeeeC-CCCcEEEEEEE
Q 029842 88 EHIHADEEIRYCLEGSGYFDVRD----ESDQWIRIWIKAGDLIVLPAGIYHRFTLD-TSNYVKLMRLF 150 (187)
Q Consensus 88 eH~H~~~Ei~yileG~g~f~i~~----~~d~~~~~~v~~GDlIiIP~g~~H~f~~~-~~~~~~~ir~f 150 (187)
.|.|+.+|+.||++|++.+.+++ + .+.+++||.+.+|+|++|++.+. ++.+.+++-++
T Consensus 135 ~h~h~~~E~~~Vl~G~~~~~~~~~~~~~-----~~~l~~GD~~~~~~~~~H~~~n~~~~~~~~~l~v~ 197 (198)
T 2bnm_A 135 NSGHAGNEFLFVLEGEIHMKWGDKENPK-----EALLPTGASMFVEEHVPHAFTAAKGTGSAKLIAVN 197 (198)
T ss_dssp CCCCSSCEEEEEEESCEEEEESCTTSCE-----EEEECTTCEEEECTTCCEEEEESTTSCCEEEEEEE
T ss_pred cccCCCeEEEEEEeeeEEEEECCcCCcc-----cEEECCCCEEEeCCCCceEEEecCCCCCeEEEEEe
Confidence 69999999999999999999998 6 89999999999999999999987 66777776654
No 35
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=98.92 E-value=2.2e-09 Score=76.62 Aligned_cols=59 Identities=12% Similarity=0.127 Sum_probs=51.1
Q ss_pred ccccccCcc-eEEEEeeceEEEEEec--CCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEE
Q 029842 86 YTEHIHADE-EIRYCLEGSGYFDVRD--ESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 86 ~~eH~H~~~-Ei~yileG~g~f~i~~--~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~ 149 (187)
...|.|+.+ |+.||++|++.+.+++ + .+.+++||.+.+|+|+.|++.+.++..++.|-+
T Consensus 31 ~~~H~H~~~~e~~~Vl~G~~~~~~~~g~~-----~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l~v 92 (97)
T 2fqp_A 31 TGWHRHSMDYVVVPMTTGPLLLETPEGSV-----TSQLTRGVSYTRPEGVEHNVINPSDTEFVFVEI 92 (97)
T ss_dssp CCSEECCSCEEEEESSCEEEEEEETTEEE-----EEEECTTCCEEECTTCEEEEECCSSSCEEEEEE
T ss_pred CCCEECCCCcEEEEEeecEEEEEeCCCCE-----EEEEcCCCEEEeCCCCcccCEeCCCCcEEEEEE
Confidence 558999975 6999999999999987 6 799999999999999999999877666666544
No 36
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=98.90 E-value=3.6e-09 Score=83.93 Aligned_cols=59 Identities=17% Similarity=0.081 Sum_probs=51.6
Q ss_pred ccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 029842 88 EHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 152 (187)
Q Consensus 88 eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~ 152 (187)
.|.|..+|+.||++|++.+.++++ .+.+++||.|++|+|++|++.+.++.+. ++-++..
T Consensus 121 ~H~h~~~E~~~Vl~G~~~~~~~~~-----~~~l~~GD~i~i~~~~~H~~~n~~~~~~-~l~v~~~ 179 (192)
T 1y9q_A 121 PHALGVIEYIHVLEGIMKVFFDEQ-----WHELQQGEHIRFFSDQPHGYAAVTEKAV-FQNIVAY 179 (192)
T ss_dssp CCSTTCEEEEEEEESCEEEEETTE-----EEEECTTCEEEEECSSSEEEEESSSCEE-EEEEEEC
T ss_pred CCCCCCEEEEEEEEeEEEEEECCE-----EEEeCCCCEEEEcCCCCeEeECCCCCcE-EEEEEec
Confidence 688888999999999999999988 8999999999999999999998766666 5555443
No 37
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=98.89 E-value=3.1e-09 Score=84.19 Aligned_cols=60 Identities=15% Similarity=0.189 Sum_probs=52.0
Q ss_pred cccccccC-cceEEEEee--ceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 029842 85 FYTEHIHA-DEEIRYCLE--GSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 153 (187)
Q Consensus 85 ~~~eH~H~-~~Ei~yile--G~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (187)
....|+|. .+|++|||+ |+|.+.++++ .+.+++||+|+||+|+.|++.. .++.|-++...
T Consensus 57 ~~~~H~H~~~~E~~yVLe~~G~g~v~idge-----~~~l~~GD~v~IPpg~~H~i~g----~l~~L~I~~Pp 119 (157)
T 4h7l_A 57 AARTHYHREHQEIYVVLDHAAHATIELNGQ-----SYPLTKLLAISIPPLVRHRIVG----EATIINIVSPP 119 (157)
T ss_dssp CCCCBBCSSCEEEEEEEEECTTCEEEETTE-----EEECCTTEEEEECTTCCEEEES----CEEEEEEEESS
T ss_pred CccceECCCCcEEEEEEecCcEEEEEECCE-----EEEeCCCCEEEECCCCeEeeEC----CEEEEEEECCC
Confidence 35789997 579999999 9999999988 8999999999999999999972 57777776643
No 38
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.89 E-value=5.7e-09 Score=76.33 Aligned_cols=47 Identities=26% Similarity=0.382 Sum_probs=43.3
Q ss_pred ccccCcceEEEEeeceEEEEEe-cCCCcEEEEEEeCCCEEEeCCCCeeeeeeCC
Q 029842 88 EHIHADEEIRYCLEGSGYFDVR-DESDQWIRIWIKAGDLIVLPAGIYHRFTLDT 140 (187)
Q Consensus 88 eH~H~~~Ei~yileG~g~f~i~-~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~ 140 (187)
.| |+.+|+.||++|++.+.++ ++ .+.+++||.|+||+|++|.+.+.+
T Consensus 45 ~h-H~~~E~~~Vl~G~~~~~i~~g~-----~~~l~~GD~i~ip~g~~H~~~n~~ 92 (101)
T 1o5u_A 45 WY-YDTNETCYILEGKVEVTTEDGK-----KYVIEKGDLVTFPKGLRCRWKVLE 92 (101)
T ss_dssp EE-CSSCEEEEEEEEEEEEEETTCC-----EEEEETTCEEEECTTCEEEEEEEE
T ss_pred cc-CCceEEEEEEeCEEEEEECCCC-----EEEECCCCEEEECCCCcEEEEeCC
Confidence 46 8899999999999999998 77 899999999999999999998754
No 39
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=98.89 E-value=3.7e-09 Score=87.61 Aligned_cols=64 Identities=19% Similarity=0.186 Sum_probs=58.9
Q ss_pred cccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 029842 85 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 153 (187)
Q Consensus 85 ~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (187)
....|+|..+|++||++|++.+.++++ .+.+++||.|.+|+|+.|++.+.++....++-+|...
T Consensus 158 ~~~~H~H~~~e~~~Vl~G~~~~~i~~~-----~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~p~ 221 (243)
T 3h7j_A 158 EMPFHKHRNEQIGICIGGGYDMTVEGC-----TVEMKFGTAYFCEPREDHGAINRSEKESKSINIFFPP 221 (243)
T ss_dssp EEEEECCSSEEEEEECSSCEEEEETTE-----EEEECTTCEEEECTTCCEEEEECSSSCEEEEEEEESC
T ss_pred cCCCEeCCCcEEEEEEECEEEEEECCE-----EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcCC
Confidence 457899999999999999999999988 8999999999999999999999888889999998853
No 40
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=98.88 E-value=4.7e-09 Score=87.05 Aligned_cols=66 Identities=23% Similarity=0.317 Sum_probs=57.8
Q ss_pred cCcccccccCcceEEEEeeceEEEEEe-cCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCC
Q 029842 83 KNFYTEHIHADEEIRYCLEGSGYFDVR-DESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEP 154 (187)
Q Consensus 83 ~~~~~eH~H~~~Ei~yileG~g~f~i~-~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~~ 154 (187)
+..++.|.|..+|++|||+|.+.|.++ +. ...+++||.|.+|+|+.|+.++ .+.++.++-++.+.+
T Consensus 142 G~~yP~HsHp~EEiy~VLsG~~e~~v~~g~-----~~~l~pGd~v~ipsgv~Ha~rt-~dePllalwvW~G~~ 208 (217)
T 4b29_A 142 GLDYGWHEHLPEELYSVVSGRALFHLRNAP-----DLMLEPGQTRFHPANAPHAMTT-LTDPILTLVLWRGAG 208 (217)
T ss_dssp SCEEEEEECSSEEEEEEEEECEEEEETTSC-----CEEECTTCEEEECTTCCEEEEC-CSSCEEEEEEEESTT
T ss_pred CCcCCCCCCCCceEEEEEeCCEEEEECCCC-----EEecCCCCEEEcCCCCceeEEE-CCccEEEEEEEeCCC
Confidence 456999999999999999999999998 44 7899999999999999999996 447888888877754
No 41
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.88 E-value=4.5e-09 Score=86.34 Aligned_cols=61 Identities=23% Similarity=0.417 Sum_probs=53.3
Q ss_pred CcccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEE
Q 029842 84 NFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLF 150 (187)
Q Consensus 84 ~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f 150 (187)
.....|+|+.+|+.||++|++.+.++++ .+.+++||.+++|+|++|++.++ ...++++-+.
T Consensus 164 ~~~~~H~H~~~e~~~Vl~G~~~~~i~g~-----~~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~ll~~ 224 (227)
T 3rns_A 164 ESLDPHKAPGDALVTVLDGEGKYYVDGK-----PFIVKKGESAVLPANIPHAVEAE-TENFKMLLIL 224 (227)
T ss_dssp CEEEEECCSSEEEEEEEEEEEEEEETTE-----EEEEETTEEEEECTTSCEEEECC-SSCEEEEEEE
T ss_pred CccCCEECCCcEEEEEEeEEEEEEECCE-----EEEECCCCEEEECCCCcEEEEeC-CCCEEEEEEE
Confidence 4567999999999999999999999988 89999999999999999999984 3456666554
No 42
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=98.88 E-value=6.8e-09 Score=87.53 Aligned_cols=60 Identities=17% Similarity=0.200 Sum_probs=53.4
Q ss_pred ccc-cccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCC-CcEEEEEEE
Q 029842 86 YTE-HIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS-NYVKLMRLF 150 (187)
Q Consensus 86 ~~e-H~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~-~~~~~ir~f 150 (187)
... |+|..+|+.||++|++.+.++++ .+.+++||+|.||+|++|++.+.++ ..++.+-+.
T Consensus 195 ~~~~H~H~~~E~~yVl~G~~~~~i~~~-----~~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l~~~ 256 (274)
T 1sef_A 195 HAYIETHVQEHGAYLISGQGMYNLDNE-----WYPVEKGDYIFMSAYVPQAAYAVGREEPLMYVYSK 256 (274)
T ss_dssp CSSCBCCSCCEEEEEEECEEEEEETTE-----EEEEETTCEEEECTTCCEEEEEECSSSCEEEEEEE
T ss_pred cCcceeccCeEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCCEEEEeCCCCCCEEEEEEE
Confidence 455 99999999999999999999988 8999999999999999999998776 777776653
No 43
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=98.84 E-value=1.5e-08 Score=87.59 Aligned_cols=69 Identities=20% Similarity=0.238 Sum_probs=58.1
Q ss_pred cccccccC-cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 029842 85 FYTEHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 153 (187)
Q Consensus 85 ~~~eH~H~-~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (187)
....|+|. .+|++||++|++.+.+.+.++.-..+.+++||+++||+|+.|++.+.++..+..+-+|...
T Consensus 64 ~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~~~ 133 (361)
T 2vqa_A 64 IRELHWHANAAEWAYVMEGRTRITLTSPEGKVEIADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFNDG 133 (361)
T ss_dssp EEEEEECTTCCEEEEEEESEEEEEEECTTSCEEEEEEETTEEEEECTTCEEEEEECSSSCEEEEEEESST
T ss_pred CCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEECCC
Confidence 45689999 9999999999999999654443336899999999999999999999877778888777554
No 44
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.83 E-value=1.4e-08 Score=76.93 Aligned_cols=49 Identities=14% Similarity=0.313 Sum_probs=46.1
Q ss_pred cccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCC
Q 029842 87 TEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT 140 (187)
Q Consensus 87 ~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~ 140 (187)
..|.|+..|+.||++|+|.+.++++ .+.+++||+++||||+.|.+...+
T Consensus 32 ~p~~h~~~~i~~v~~G~~~~~i~~~-----~~~l~~Gd~~~i~p~~~H~~~~~~ 80 (164)
T 2arc_A 32 RPLGMKGYILNLTIRGQGVVKNQGR-----EFVCRPGDILLFPPGEIHHYGRHP 80 (164)
T ss_dssp ETTCCSSEEEEEEEEECEEEEETTE-----EEEECTTCEEEECTTCCEEEEECT
T ss_pred cccCCCceEEEEEEEeEEEEEECCE-----EEEecCCeEEEEcCCCCEEEEeCC
Confidence 4789999999999999999999988 999999999999999999998765
No 45
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.78 E-value=2e-08 Score=85.53 Aligned_cols=69 Identities=19% Similarity=0.353 Sum_probs=59.0
Q ss_pred eeeeeeCcccccCHHHHhcCccc-ccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCc
Q 029842 65 MDLLDLCPEKVTNYEEKLKNFYT-EHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNY 143 (187)
Q Consensus 65 ~dvv~v~~~~~p~~~~~~~~~~~-eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~ 143 (187)
..++++.|+. ... .|+|..+|.+|||+|+|.|.+++. .+.|++||+|.+|+|.+|++.+..+.+
T Consensus 188 ~~~~t~~PG~----------~~p~~e~H~~eh~~~vL~G~g~y~l~~~-----~~~V~~GD~i~~~~~~~h~~~n~G~e~ 252 (266)
T 4e2q_A 188 IHTMDFQPGE----------FLNVKEVHYNQHGLLLLEGQGIYRLGDN-----WYPVQAGDVIWMAPFVPQWYAALGKTR 252 (266)
T ss_dssp EEEEEECTTC----------BCSSCCCCSCCEEEEEEECEEEEEETTE-----EEEEETTCEEEECTTCCEEEEEESSSC
T ss_pred EEEEEECCCc----------CcCCceEcccceEEEEEeceEEEEECCE-----EEEecCCCEEEECCCCcEEEEeCCCCC
Confidence 4566777653 344 588999999999999999999988 899999999999999999999988788
Q ss_pred EEEEE
Q 029842 144 VKLMR 148 (187)
Q Consensus 144 ~~~ir 148 (187)
++.|-
T Consensus 253 ~~yl~ 257 (266)
T 4e2q_A 253 SRYLL 257 (266)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87764
No 46
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.78 E-value=1.6e-08 Score=88.47 Aligned_cols=68 Identities=22% Similarity=0.297 Sum_probs=57.7
Q ss_pred cccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 029842 85 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 153 (187)
Q Consensus 85 ~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (187)
....|+|+.+|++||++|++.+.+.+.+++.+.+.+++||+++||+|+.|++.+.++ .+..+-+|...
T Consensus 91 ~~~~H~H~~~E~~~Vl~G~~~~~~~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~-~~~~~~v~~~~ 158 (385)
T 1j58_A 91 IRELHWHKEAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEE-GAEFLLVFDDG 158 (385)
T ss_dssp EEEEEEESSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEEEEE-EEEEEEEESCT
T ss_pred CCCCccCChheEEEEEeeeEEEEEEeCCCcEEEEEeCCCCEEEECCCCeEEEEECCC-CEEEEEEECCC
Confidence 467899999999999999999999877777767799999999999999999988653 46666666544
No 47
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.78 E-value=1.7e-08 Score=85.88 Aligned_cols=64 Identities=30% Similarity=0.567 Sum_probs=56.3
Q ss_pred CcccccccC-cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 029842 84 NFYTEHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 153 (187)
Q Consensus 84 ~~~~eH~H~-~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (187)
.....|+|. .+|++||++|++.+.++++ .+.+++||+++||+|+.|++.+.++ ..+++-+|...
T Consensus 229 ~~~~~h~H~~~~e~~~vl~G~~~~~i~~~-----~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~~~~ 293 (337)
T 1y3t_A 229 DRIVDHYHEYHTETFYCLEGQMTMWTDGQ-----EIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVLVPG 293 (337)
T ss_dssp CCCCCEECSSCEEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTCCEEEEECSS-SEEEEEEEESS
T ss_pred CCCCCcCCCCCcEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCeEEEEECCC-CeEEEEEEcCc
Confidence 345679998 6999999999999999987 8999999999999999999999876 77888777553
No 48
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=98.77 E-value=3.2e-08 Score=85.60 Aligned_cols=70 Identities=19% Similarity=0.286 Sum_probs=59.7
Q ss_pred CcccccccCc-ceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 029842 84 NFYTEHIHAD-EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 153 (187)
Q Consensus 84 ~~~~eH~H~~-~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (187)
.....|+|.. +|+.||++|++.+.+.+.+++...+.+++||+++||+|+.|++.+.++..++++-++...
T Consensus 245 ~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~~ 315 (361)
T 2vqa_A 245 AMRQLHWHPNADEWQYVLDGEMDLTVFASEGKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFNDG 315 (361)
T ss_dssp CEEEEEECSSCCEEEEEEESCEEEEEECSTTCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESSS
T ss_pred cccccccCCCCCEEEEEEeCEEEEEEEcCCCcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECCC
Confidence 3456799986 999999999999999655555567999999999999999999998777788888888653
No 49
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=98.77 E-value=2.2e-08 Score=79.64 Aligned_cols=66 Identities=17% Similarity=0.298 Sum_probs=52.8
Q ss_pred ccccccc-CcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCC-cEEEEEEEcC
Q 029842 85 FYTEHIH-ADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSN-YVKLMRLFVG 152 (187)
Q Consensus 85 ~~~eH~H-~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~-~~~~ir~f~~ 152 (187)
....| | ..+|+.||++|++.+.+.+.++. ..+.+++||+++||+|+.|++.+.++. .+.++-++..
T Consensus 53 ~~~pH-h~~a~E~~yVl~G~~~v~v~~~~~~-~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~~~ 120 (178)
T 1dgw_A 53 LLLPH-HSDSDLLVLVLEGQAILVLVNPDGR-DTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAIT 120 (178)
T ss_dssp EEEEE-EESSEEEEEEEESEEEEEEEETTEE-EEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEEEEC
T ss_pred EecCc-CCCCCEEEEEEeEEEEEEEEeCCCc-EEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEEECC
Confidence 35788 6 47999999999999999743322 278999999999999999999987654 7777766543
No 50
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=98.77 E-value=8.4e-09 Score=90.57 Aligned_cols=62 Identities=26% Similarity=0.404 Sum_probs=54.9
Q ss_pred CcccccccCcceEEEEeeceEEE-EEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEE
Q 029842 84 NFYTEHIHADEEIRYCLEGSGYF-DVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLF 150 (187)
Q Consensus 84 ~~~~eH~H~~~Ei~yileG~g~f-~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f 150 (187)
.....|.|+.+|++||++|+|.| .++++ .+.+++||+++||+|+.|++.+.++.++..+.+.
T Consensus 111 ~~~~~H~H~~~e~~yVl~G~g~~t~v~g~-----~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v~ 173 (354)
T 2d40_A 111 EVAPSHRHNQSALRFIVEGKGAFTAVDGE-----RTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDGL 173 (354)
T ss_dssp CEEEEEEESSCEEEEEEECSSCEEEETTE-----EEECCTTCEEEECTTSCEEEECCSSSCEEEEEEE
T ss_pred CCcCCeecCcceEEEEEEEEEEEEEECCE-----EEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 44678999999999999999999 88877 8999999999999999999998877777777664
No 51
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.76 E-value=2.1e-08 Score=85.36 Aligned_cols=62 Identities=23% Similarity=0.403 Sum_probs=54.3
Q ss_pred cccccccC-cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 029842 85 FYTEHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 152 (187)
Q Consensus 85 ~~~eH~H~-~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~ 152 (187)
....|+|. .+|++||++|++.+.++++ .+.+++||++.+|+|+.|.+.+.++ ..+++-++..
T Consensus 58 ~~~~h~H~~~~e~~~Vl~G~~~~~~~~~-----~~~l~~Gd~~~~p~~~~H~~~n~~~-~~~~~~~~~p 120 (337)
T 1y3t_A 58 AFPLHVHKDTHEGILVLDGKLELTLDGE-----RYLLISGDYANIPAGTPHSYRMQSH-RTRLVSYTMK 120 (337)
T ss_dssp EEEEEECTTCCEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTCCEEEEECST-TEEEEEEEET
T ss_pred CCCceeCCCceEEEEEEECEEEEEECCE-----EEEECCCCEEEECCCCcEEEEECCC-CeEEEEEECC
Confidence 45679999 8999999999999999887 8999999999999999999998766 4667766554
No 52
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.76 E-value=1.3e-08 Score=90.28 Aligned_cols=60 Identities=25% Similarity=0.481 Sum_probs=54.4
Q ss_pred CcccccccCcceEEEEeeceE-EEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEE
Q 029842 84 NFYTEHIHADEEIRYCLEGSG-YFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMR 148 (187)
Q Consensus 84 ~~~~eH~H~~~Ei~yileG~g-~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir 148 (187)
.....|.|..+|++||++|+| ++.++|+ ++.+++||+|+||+|..|.+.++++.++..+-
T Consensus 114 ~~~~~HrH~~~ev~~VleG~G~~~~vdG~-----~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l~ 174 (368)
T 3nw4_A 114 ETAPEHRHSQNAFRFVVEGEGVWTVVNGD-----PVRMSRGDLLLTPGWCFHGHMNDTDQPMAWID 174 (368)
T ss_dssp CEEEEEEESSCEEEECSSCEEEEEEETTE-----EEEEETTCEEEECTTCCEEEEECSSSCEEEEE
T ss_pred CccCceecccceEEEEEecceEEEEECCE-----EEEEeCCCEEEECCCCcEEeEeCCCCCeEEEE
Confidence 457889999999999999999 5888888 99999999999999999999998888888764
No 53
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=98.74 E-value=2.4e-08 Score=83.41 Aligned_cols=60 Identities=18% Similarity=0.108 Sum_probs=50.5
Q ss_pred cccccccC-cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCC-CcEEEEEE
Q 029842 85 FYTEHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS-NYVKLMRL 149 (187)
Q Consensus 85 ~~~eH~H~-~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~-~~~~~ir~ 149 (187)
....|.|. .+|++||++|++.+.++++ .+.+++||.|.+|+|+.|++.+.++ .+++.+-+
T Consensus 191 ~~~~h~H~~~~E~~~Vl~G~~~~~i~~~-----~~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l~~ 252 (261)
T 1rc6_A 191 SHGYIETHVQEHGAYILSGQGVYNLDNN-----WIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYS 252 (261)
T ss_dssp CBEEEEEESSCEEEEEEESEEEEESSSC-----EEEEETTCEEEECSSEEEEEEEC----CEEEEEE
T ss_pred ccCcccCCCceEEEEEEEeEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEeCCCCcCEEEEEE
Confidence 35678885 7899999999999999988 8999999999999999999999776 77776654
No 54
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=98.71 E-value=7.5e-08 Score=87.91 Aligned_cols=74 Identities=14% Similarity=0.262 Sum_probs=62.3
Q ss_pred cCcccccccC-cceEEEEeeceEEEEEecCCC-cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEE-cCCCceE
Q 029842 83 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLF-VGEPVWT 157 (187)
Q Consensus 83 ~~~~~eH~H~-~~Ei~yileG~g~f~i~~~~d-~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f-~~~~gw~ 157 (187)
+.....|+|+ ..|+.||++|++.+.+.+.++ +++...+++||+++||+|..|+..+ .+..+..+-|+ ...++-+
T Consensus 348 Ga~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~viP~G~~H~~~n-g~~~l~~l~f~~s~~p~~~ 424 (476)
T 1fxz_A 348 NAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARS-QSDNFEYVSFKTNDTPMIG 424 (476)
T ss_dssp TCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEE-CSTTEEEEEEESSSSCCEE
T ss_pred CceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEEECCCCeEEEEe-CCCCEEEEEEECCCCCcee
Confidence 3567899998 789999999999999987654 5778889999999999999999999 46778888888 4455544
No 55
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=98.71 E-value=2.9e-08 Score=82.13 Aligned_cols=61 Identities=20% Similarity=0.192 Sum_probs=53.7
Q ss_pred CcccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEE-EeCCCCeeeeeeCCCCcEEEEEE
Q 029842 84 NFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLI-VLPAGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 84 ~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlI-iIP~g~~H~f~~~~~~~~~~ir~ 149 (187)
.....|+|+.+|++||++|++.+.++++ ...+++||.| +||+|+.|++.+.++.+..++-+
T Consensus 45 ~~~~~H~H~~~e~~~Vl~G~~~~~~~~~-----~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l~i 106 (243)
T 3h7j_A 45 TNVEPHQHKEVQIGMVVSGELMMTVGDV-----TRKMTALESAYIAPPHVPHGARNDTDQEVIAIDI 106 (243)
T ss_dssp EEEEEECCSSEEEEEEEESEEEEEETTE-----EEEEETTTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred CccCCEECCCcEEEEEEEeEEEEEECCE-----EEEECCCCEEEEcCCCCcEeeEeCCCCcEEEEEE
Confidence 3467899999999999999999999888 8999999999 59999999999877766666655
No 56
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.70 E-value=5.2e-08 Score=85.16 Aligned_cols=69 Identities=17% Similarity=0.250 Sum_probs=57.3
Q ss_pred cccccccCc-ceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 029842 85 FYTEHIHAD-EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 153 (187)
Q Consensus 85 ~~~eH~H~~-~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (187)
....|+|.. +|++||++|++.+.+.+.++.--.+.+++||.+++|+|+.|++.+.++..+.++-++...
T Consensus 269 ~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~~ 338 (385)
T 1j58_A 269 MRELHWHPNTHEWQYYISGKARMTVFASDGHARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKDD 338 (385)
T ss_dssp EEEEEECSSSCEEEEEEESEEEEEEEEETTEEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESSS
T ss_pred ccCceeCCCCCEEEEEEeCeEEEEEEcCCCcEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECCC
Confidence 456799997 999999999999999832222127899999999999999999998877788888887753
No 57
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.70 E-value=6.2e-08 Score=80.58 Aligned_cols=71 Identities=20% Similarity=0.298 Sum_probs=57.3
Q ss_pred eeeeeeeCcccccCHHHHhcCcccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCc
Q 029842 64 YMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNY 143 (187)
Q Consensus 64 ~~dvv~v~~~~~p~~~~~~~~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~ 143 (187)
..-++++.|+. .....|.|..+|.+|||+|++.+.++++ .+.+++||.|.++++.+|+|.+..+.+
T Consensus 166 ~~~~~tl~PG~---------~~~~~~~h~~ee~~~vLeG~~~~~~~~~-----~~~l~~GD~~~~~~~~pH~~~n~g~~~ 231 (246)
T 1sfn_A 166 MVSTMSFAPGA---------SLPYAEVHYMEHGLLMLEGEGLYKLEEN-----YYPVTAGDIIWMGAHCPQWYGALGRNW 231 (246)
T ss_dssp EEEEEEECTTC---------BCSSCBCCSSCEEEEEEECEEEEEETTE-----EEEEETTCEEEECTTCCEEEEEESSSC
T ss_pred EEEEEEECCCC---------ccCcccCCCceEEEEEEECEEEEEECCE-----EEEcCCCCEEEECCCCCEEEEcCCCCC
Confidence 34566676653 1222367889999999999999999988 899999999999999999999987777
Q ss_pred EEEEE
Q 029842 144 VKLMR 148 (187)
Q Consensus 144 ~~~ir 148 (187)
++.|-
T Consensus 232 ~~yl~ 236 (246)
T 1sfn_A 232 SKYLL 236 (246)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 75553
No 58
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.69 E-value=3.7e-08 Score=88.09 Aligned_cols=62 Identities=21% Similarity=0.272 Sum_probs=54.3
Q ss_pred cCcccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCC-CCcEEEEEE
Q 029842 83 KNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT-SNYVKLMRL 149 (187)
Q Consensus 83 ~~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~-~~~~~~ir~ 149 (187)
+.....|.|..+|++||++|+|++.|+++ ++.+++||+|+||+|..|.+.+.+ +.++..+.+
T Consensus 304 G~~~~~HrH~~~~v~~VleG~G~~~V~ge-----~~~~~~GD~~~iP~g~~H~~~N~g~~e~~~ll~i 366 (394)
T 3bu7_A 304 GEHTKAHRHTGNVIYNVAKGQGYSIVGGK-----RFDWSEHDIFCVPAWTWHEHCNTQERDDACLFSF 366 (394)
T ss_dssp TCBCCCEEESSCEEEEEEECCEEEEETTE-----EEEECTTCEEEECTTCCEEEEECCSSCCEEEEEE
T ss_pred CCcCCCcccCCcEEEEEEeCeEEEEECCE-----EEEEeCCCEEEECCCCeEEeEeCCCCCCeEEEEe
Confidence 34577899999999999999999999988 999999999999999999999875 566665555
No 59
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.69 E-value=5e-08 Score=78.30 Aligned_cols=56 Identities=25% Similarity=0.340 Sum_probs=48.9
Q ss_pred CcccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCC
Q 029842 84 NFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT 140 (187)
Q Consensus 84 ~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~ 140 (187)
..+.+|.|+.+|++|+++|+..+.+.+. ++.-.+.+++||+++||+|++|+-.+.+
T Consensus 46 ~r~d~H~h~~dE~FyvlkG~m~i~v~d~-g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 46 HRTDYHDDPLEEFFYQLRGNAYLNLWVD-GRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp CCCCEEECSSCEEEEEEESCEEEEEEET-TEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred cCccCcCCCCceEEEEEeeEEEEEEEcC-CceeeEEECCCCEEEeCCCCCcCccccC
Confidence 5689999999999999999999999863 3344799999999999999999986544
No 60
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=98.69 E-value=4.2e-08 Score=78.60 Aligned_cols=76 Identities=17% Similarity=0.310 Sum_probs=63.3
Q ss_pred eeeeeeeCcccccCHHHHhcCcccccccCcceEEEEeeceEEEEEe-cCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCC
Q 029842 64 YMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVR-DESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSN 142 (187)
Q Consensus 64 ~~dvv~v~~~~~p~~~~~~~~~~~eH~H~~~Ei~yileG~g~f~i~-~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~ 142 (187)
..-++.+.|.. ....|.|..+|..|||+|++.+.++ ++ .+.+++||.+ +|+|+.|++.+..+.
T Consensus 80 ~~~~v~l~PG~----------~~~~H~H~~eE~~~VLeGel~l~ld~ge-----~~~L~~GDsi-~~~g~~H~~~N~g~~ 143 (172)
T 3es1_A 80 VIRVVDMLPGK----------ESPMHRTNSIDYGIVLEGEIELELDDGA-----KRTVRQGGII-VQRGTNHLWRNTTDK 143 (172)
T ss_dssp EEEEEEECTTC----------BCCCBCCSEEEEEEEEESCEEEECGGGC-----EEEECTTCEE-EECSCCBEEECCSSS
T ss_pred EEEEEEECCCC----------CCCCeecCceEEEEEEeCEEEEEECCCe-----EEEECCCCEE-EeCCCcEEEEeCCCC
Confidence 34455666643 3578999989999999999999998 67 8999999999 999999999998878
Q ss_pred cEEEEEEEcCCCc
Q 029842 143 YVKLMRLFVGEPV 155 (187)
Q Consensus 143 ~~~~ir~f~~~~g 155 (187)
..+++-++.....
T Consensus 144 ~ar~l~V~~P~~p 156 (172)
T 3es1_A 144 PCRIAFILIEAPA 156 (172)
T ss_dssp CEEEEEEEEECCC
T ss_pred CEEEEEEEcCCCc
Confidence 8888888777643
No 61
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=98.69 E-value=1.2e-07 Score=75.52 Aligned_cols=56 Identities=11% Similarity=0.010 Sum_probs=50.1
Q ss_pred cccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEE
Q 029842 87 TEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLM 147 (187)
Q Consensus 87 ~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~i 147 (187)
..+.|..+|++|||+|+..+.++++ .+.+++||.+.||+|..|++.+..+.+.+++
T Consensus 104 ~~~~h~gEE~~yVLeG~v~vtl~g~-----~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll 159 (166)
T 2vpv_A 104 LSNSFRTYITFHVIQGIVEVTVCKN-----KFLSVKGSTFQIPAFNEYAIANRGNDEAKMF 159 (166)
T ss_dssp EEECCSEEEEEEEEESEEEEEETTE-----EEEEETTCEEEECTTCEEEEEECSSSCEEEE
T ss_pred CccCCCceEEEEEEEeEEEEEECCE-----EEEEcCCCEEEECCCCCEEEEECCCCCEEEE
Confidence 4477889999999999999999998 9999999999999999999999877665544
No 62
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=98.69 E-value=7.8e-08 Score=88.54 Aligned_cols=75 Identities=16% Similarity=0.258 Sum_probs=62.6
Q ss_pred cCcccccccC-cceEEEEeeceEEEEEecCCC-cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEE-cCCCceEE
Q 029842 83 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLF-VGEPVWTA 158 (187)
Q Consensus 83 ~~~~~eH~H~-~~Ei~yileG~g~f~i~~~~d-~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f-~~~~gw~~ 158 (187)
+.....|+|+ ..|++||++|++.+.+.+.++ +.+...+++||+++||+|+.|+..+ .+..+..+-|+ ...++-+.
T Consensus 382 G~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~viP~G~~H~~~N-g~e~l~~l~f~~s~~p~~~~ 459 (510)
T 3c3v_A 382 NALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLVVPQNFAVAGKS-QSDNFEYVAFKTDSRPSIAN 459 (510)
T ss_dssp TCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEE-CSSEEEEEEEESSSSCCEEE
T ss_pred CceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEEEECCCCeEEEEe-CCCCEEEEEEECCCCcceee
Confidence 3567899998 789999999999999987654 6777889999999999999999999 46778888888 44455543
No 63
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=98.68 E-value=8.9e-08 Score=87.78 Aligned_cols=75 Identities=15% Similarity=0.210 Sum_probs=62.2
Q ss_pred CcccccccC-cceEEEEeeceEEEEEecCC-CcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC-CCceEEe
Q 029842 84 NFYTEHIHA-DEEIRYCLEGSGYFDVRDES-DQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG-EPVWTAY 159 (187)
Q Consensus 84 ~~~~eH~H~-~~Ei~yileG~g~f~i~~~~-d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~-~~gw~~~ 159 (187)
.....|+|+ .+|++||++|++.+.+.+.+ .+++...+++||+++||+|..|+..+++ ..+..|-+|+. .++-..+
T Consensus 378 ~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~vvP~G~~H~~~n~~-e~~~~l~~~ts~~p~~~~l 455 (493)
T 2d5f_A 378 GIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLVVPQNFVVAEQGGE-QGLEYVVFKTHHNAVSSYI 455 (493)
T ss_dssp CEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEE-EEEEEEEEESSTTCCEEEH
T ss_pred ceeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEEEECCCCeEeeeeCC-CCEEEEEEECCCCCcceeH
Confidence 457899998 78999999999999998765 4567788999999999999999988754 67888988844 4665543
No 64
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=98.68 E-value=4.9e-08 Score=76.72 Aligned_cols=61 Identities=20% Similarity=0.481 Sum_probs=47.8
Q ss_pred ccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCceEE
Q 029842 90 IHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTA 158 (187)
Q Consensus 90 ~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~~gw~~ 158 (187)
.|+.+|+.|||+|++.+.++++ .+.+++||.++||+|+.|++.+. .+.+.+-+.. +++|..
T Consensus 81 ~~~~eE~~yVLeG~~~l~i~g~-----~~~l~~GD~i~iP~G~~h~~~n~--~~a~~l~V~~-P~~~~~ 141 (151)
T 4axo_A 81 TLNYDEIDYVIDGTLDIIIDGR-----KVSASSGELIFIPKGSKIQFSVP--DYARFIYVTY-PADWAS 141 (151)
T ss_dssp ECSSEEEEEEEEEEEEEEETTE-----EEEEETTCEEEECTTCEEEEEEE--EEEEEEEEEE-CSCC--
T ss_pred eCCCcEEEEEEEeEEEEEECCE-----EEEEcCCCEEEECCCCEEEEEeC--CCEEEEEEEC-CCCccc
Confidence 3468999999999999999887 89999999999999999999986 3444444443 244443
No 65
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=98.68 E-value=5.5e-08 Score=88.10 Aligned_cols=78 Identities=13% Similarity=0.169 Sum_probs=63.6
Q ss_pred eeeeeeCcccccCHHHHhcCcccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCC-CCc
Q 029842 65 MDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT-SNY 143 (187)
Q Consensus 65 ~dvv~v~~~~~p~~~~~~~~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~-~~~ 143 (187)
.-.+++.|. .....|.|..+|++||++|+|.+.+-+.++. ....+++||++.+|+|+.||+.+.+ +.+
T Consensus 88 ~~~~~l~Pg----------g~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~-~~~~l~~GDv~~~P~G~~H~~~N~g~~~~ 156 (445)
T 2cav_A 88 VLEYCSKPN----------TLLLPHHSDSDLLVLVLEGQAILVLVNPDGR-DTYKLDQGDAIKIQAGTPFYLINPDNNQN 156 (445)
T ss_dssp EEEEEECSS----------EEEEEEEESSEEEEEEEESEEEEEEEETTEE-EEEEEETTEEEEECTTCCEEEEECCSSCC
T ss_pred EEEEEECCC----------cCccCcCCCCceEEEEEeCEEEEEEEeCCCC-EEEEecCCCEEEECCCCcEEEEECCCCCC
Confidence 345566664 3567886679999999999999998654333 5889999999999999999999886 788
Q ss_pred EEEEEEEcCC
Q 029842 144 VKLMRLFVGE 153 (187)
Q Consensus 144 ~~~ir~f~~~ 153 (187)
+.+|.+|...
T Consensus 157 l~~l~v~~~~ 166 (445)
T 2cav_A 157 LRILKFAITF 166 (445)
T ss_dssp EEEEEEEECC
T ss_pred EEEEEEeccC
Confidence 9999888744
No 66
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=98.67 E-value=2.5e-08 Score=83.51 Aligned_cols=66 Identities=20% Similarity=0.125 Sum_probs=54.5
Q ss_pred cccccccC-cceEEEEeeceEEEEE--------ecC-------CCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEE-E
Q 029842 85 FYTEHIHA-DEEIRYCLEGSGYFDV--------RDE-------SDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKL-M 147 (187)
Q Consensus 85 ~~~eH~H~-~~Ei~yileG~g~f~i--------~~~-------~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~-i 147 (187)
....|+|. .+|++||++|++.+.+ ++. +++.+.+.+++||+++||+|++|.|.+.++.+.++ +
T Consensus 55 ~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~~l 134 (239)
T 2xlg_A 55 GPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVF 134 (239)
T ss_dssp SCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEEEEECCSSSCEEEEE
T ss_pred cCCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECCCCCEEEEeCCCCCEEEEE
Confidence 35789998 8999999999999999 543 12355789999999999999999999877777777 5
Q ss_pred EEE
Q 029842 148 RLF 150 (187)
Q Consensus 148 r~f 150 (187)
-++
T Consensus 135 ~~~ 137 (239)
T 2xlg_A 135 VWM 137 (239)
T ss_dssp EEE
T ss_pred EEE
Confidence 555
No 67
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.66 E-value=4.8e-08 Score=87.32 Aligned_cols=61 Identities=23% Similarity=0.445 Sum_probs=54.4
Q ss_pred cCcccccccCcceEEEEeeceEEE-EEecCCCcEEEEEEeCCCEEEeCCCCeeeeee-CCCCcEEEEE
Q 029842 83 KNFYTEHIHADEEIRYCLEGSGYF-DVRDESDQWIRIWIKAGDLIVLPAGIYHRFTL-DTSNYVKLMR 148 (187)
Q Consensus 83 ~~~~~eH~H~~~Ei~yileG~g~f-~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~-~~~~~~~~ir 148 (187)
+.....|.|...|++|||+|+|.| .++++ ++.+++||+|++|+|..|...+ .++.++..+.
T Consensus 133 G~~~~~HrH~~~ev~~IleG~G~~t~v~G~-----~~~~~~GD~i~~P~g~~H~~~N~~gde~l~~l~ 195 (394)
T 3bu7_A 133 GERAGAHRHAASALRFIMEGSGAYTIVDGH-----KVELGANDFVLTPNGTWHEHGILESGTECIWQD 195 (394)
T ss_dssp TCBCCCEEESSCEEEEEEECSCEEEEETTE-----EEEECTTCEEEECTTCCEEEEECTTCCCEEEEE
T ss_pred CCCcCCccCCcceEEEEEEeeEEEEEECCE-----EEEEcCCCEEEECcCCCEEEEcCCCCCCEEEEE
Confidence 355788999988999999999977 88887 9999999999999999999999 8878887774
No 68
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.66 E-value=6.1e-08 Score=84.74 Aligned_cols=64 Identities=22% Similarity=0.347 Sum_probs=52.7
Q ss_pred ccccC-cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 029842 88 EHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 152 (187)
Q Consensus 88 eH~H~-~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~ 152 (187)
.|+|. .+|++||++|++.+.+++.++..-.+.+++||.++||+|+.|+|.+.++.. +++-++..
T Consensus 65 ~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~-~~l~v~~p 129 (350)
T 1juh_A 65 PHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT-EMTGVIVP 129 (350)
T ss_dssp CEECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTE-EEEEEEES
T ss_pred cccCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCCC-EEEEEEcC
Confidence 79998 899999999999999998222222899999999999999999999866554 66666554
No 69
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.65 E-value=6.3e-08 Score=82.22 Aligned_cols=58 Identities=14% Similarity=0.241 Sum_probs=51.4
Q ss_pred cccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEE
Q 029842 87 TEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 87 ~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~ 149 (187)
..|.|..+|++||++|++.+.++++ .+.+++||.+.+|+|+.|++.+.++...+++-+
T Consensus 84 ~~h~H~~eE~~~Vl~G~l~v~v~g~-----~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l~v 141 (278)
T 1sq4_A 84 PEQDPNAEAVLFVVEGELSLTLQGQ-----VHAMQPGGYAFIPPGADYKVRNTTGQHTRFHWI 141 (278)
T ss_dssp CCCCTTEEEEEEEEESCEEEEESSC-----EEEECTTEEEEECTTCCEEEECCSSSCEEEEEE
T ss_pred CCcCCCceEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCcEEEEECCCCCEEEEEE
Confidence 4578999999999999999999988 999999999999999999999876666665544
No 70
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.64 E-value=7.5e-08 Score=84.17 Aligned_cols=62 Identities=11% Similarity=0.174 Sum_probs=53.5
Q ss_pred CcccccccCcceEEEEeeceEEEEEec-CCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 029842 84 NFYTEHIHADEEIRYCLEGSGYFDVRD-ESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 152 (187)
Q Consensus 84 ~~~~eH~H~~~Ei~yileG~g~f~i~~-~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~ 152 (187)
.....|+|+.+++.|||+|++.+.+++ + .+.+++||.|+||+|++|.+.+.+. . +++-.+..
T Consensus 263 ~~~~~h~~~~~~~~~vleG~~~i~i~g~~-----~~~l~~Gd~~~iPag~~h~~~~~~~-~-~~~l~~~~ 325 (350)
T 1juh_A 263 VTVPTWSFPGACAFQVQEGRVVVQIGDYA-----ATELGSGDVAFIPGGVEFKYYSEAY-F-SKVLFVSS 325 (350)
T ss_dssp SCCCCBCCSSCEEEEEEESCEEEEETTSC-----CEEECTTCEEEECTTCCEEEEESSS-S-EEEEEEEE
T ss_pred CCCCcccCCCcEEEEEEeeEEEEEECCeE-----EEEeCCCCEEEECCCCCEEEEecCC-e-EEEEEEec
Confidence 467789999999999999999999998 6 8999999999999999999998754 3 55555554
No 71
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=98.62 E-value=1.1e-07 Score=85.85 Aligned_cols=77 Identities=13% Similarity=0.222 Sum_probs=62.5
Q ss_pred eeeeeeeCcccccCHHHHhcCcccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCC-CC
Q 029842 64 YMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT-SN 142 (187)
Q Consensus 64 ~~dvv~v~~~~~p~~~~~~~~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~-~~ 142 (187)
..-.+++.|. .....|.|..+|++||++|+|.+.+-+ ++.-....+++||+++||+|+.|++.+.+ +.
T Consensus 62 s~~~~~l~PG----------g~~~pHh~~a~Ei~yVl~G~g~v~~v~-~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e 130 (434)
T 2ea7_A 62 RVVEFKSKPN----------TLLLPHHADADFLLVVLNGTAVLTLVN-PDSRDSYILEQGHAQKIPAGTTFFLVNPDDNE 130 (434)
T ss_dssp EEEEEEECTT----------EEEEEEEESEEEEEEEEESEEEEEEEC-SSCEEEEEEETTEEEEECTTCEEEEEECCSSC
T ss_pred EEEEEEecCC----------cCccCccCCCceEEEEEecEEEEEEEe-CCCCEEEEeCCCCEEEECCCccEEEEeCCCCC
Confidence 3455667765 357889556899999999999999974 34455889999999999999999999876 77
Q ss_pred cEEEEEEEc
Q 029842 143 YVKLMRLFV 151 (187)
Q Consensus 143 ~~~~ir~f~ 151 (187)
++.+|-+|.
T Consensus 131 ~l~~l~~~~ 139 (434)
T 2ea7_A 131 NLRIIKLAI 139 (434)
T ss_dssp CEEEEEEEE
T ss_pred CeEEEEEec
Confidence 888888864
No 72
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=98.61 E-value=1.2e-07 Score=85.21 Aligned_cols=77 Identities=16% Similarity=0.236 Sum_probs=62.7
Q ss_pred eeeeeeeCcccccCHHHHhcCcccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeC-CCC
Q 029842 64 YMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLD-TSN 142 (187)
Q Consensus 64 ~~dvv~v~~~~~p~~~~~~~~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~-~~~ 142 (187)
..-.+++.|. .....|.|..+|++||++|+|.+.+-+. +.-....+++||++.||+|+.|++.+. ++.
T Consensus 50 s~~~~~l~PG----------g~~~pHh~~a~E~~yVl~G~g~v~~v~~-~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e 118 (416)
T 1uij_A 50 RIVQFQSKPN----------TILLPHHADADFLLFVLSGRAILTLVNN-DDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQ 118 (416)
T ss_dssp EEEEEEECTT----------EEEEEEEESEEEEEEEEESCEEEEEECS-SCEEEEEECTTEEEEECTTCEEEEEECCSSC
T ss_pred EEEEEEeccC----------cCcccccCCCceEEEEEeeEEEEEEEEC-CCCeEEEecCCCEEEECCCCeEEEEecCCCC
Confidence 4455667765 3577895578999999999999998543 344488999999999999999999998 478
Q ss_pred cEEEEEEEc
Q 029842 143 YVKLMRLFV 151 (187)
Q Consensus 143 ~~~~ir~f~ 151 (187)
++.+|.++.
T Consensus 119 ~l~~l~~~~ 127 (416)
T 1uij_A 119 NLKMIWLAI 127 (416)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEec
Confidence 899988875
No 73
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=98.60 E-value=1.3e-07 Score=72.28 Aligned_cols=53 Identities=28% Similarity=0.372 Sum_probs=45.0
Q ss_pred CcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEc
Q 029842 92 ADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFV 151 (187)
Q Consensus 92 ~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~ 151 (187)
..+|+.|||+|++.+.++++ .+.+++||.+.+|+|+.|.+...+ .++.+-++.
T Consensus 74 ~~~E~~~VLeG~~~l~~~g~-----~~~l~~GD~i~~p~g~~h~~~~~~--~~~~l~v~~ 126 (133)
T 2pyt_A 74 NYDEIDMVLEGELHVRHEGE-----TMIAKAGDVMFIPKGSSIEFGTPT--SVRFLYVAW 126 (133)
T ss_dssp SSEEEEEEEEEEEEEEETTE-----EEEEETTCEEEECTTCEEEEEEEE--EEEEEEEEE
T ss_pred CCCEEEEEEECEEEEEECCE-----EEEECCCcEEEECCCCEEEEEeCC--CEEEEEEEc
Confidence 58999999999999999988 899999999999999999998643 455554443
No 74
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=98.60 E-value=1.2e-07 Score=86.62 Aligned_cols=81 Identities=16% Similarity=0.183 Sum_probs=66.2
Q ss_pred CCCeeeeeeeCcccccCHHHHhcCcccccccCcceEEEEeeceEEEEEecCCCc----------------------EEEE
Q 029842 61 GYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQ----------------------WIRI 118 (187)
Q Consensus 61 Gy~~~dvv~v~~~~~p~~~~~~~~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~----------------------~~~~ 118 (187)
|+.. -.++|.|. .+...|+|+..|++||++|+|.+.+-..+.. ....
T Consensus 47 gvs~-~r~~l~Pg----------gl~~Ph~~~a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~d~~qk~~ 115 (476)
T 1fxz_A 47 GVAL-SRCTLNRN----------ALRRPSYTNGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSRPQDRHQKIY 115 (476)
T ss_dssp TCEE-EEEEECTT----------EEEEEEEESSCEEEEEEECCEEEEEECTTCCCC------------------CCCCEE
T ss_pred ceEE-EEEEEcCC----------CEecceecCCceEEEEEecEEEEEEEcCCCcchhhccccccccccccccccccceEE
Confidence 7643 34566764 4678999999999999999999999864321 1257
Q ss_pred EEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 029842 119 WIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 152 (187)
Q Consensus 119 ~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~ 152 (187)
.+++||+|.||+|+.||+.++++.++.+|-+|..
T Consensus 116 ~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d~ 149 (476)
T 1fxz_A 116 NFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDT 149 (476)
T ss_dssp EECTTEEEEECTTCEEEEEECSSSCEEEEEEECT
T ss_pred EEeCCCEEEECCCCcEEEEeCCCCCEEEEEEecC
Confidence 8999999999999999999998889999999874
No 75
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.57 E-value=8.9e-08 Score=72.40 Aligned_cols=49 Identities=22% Similarity=0.295 Sum_probs=43.0
Q ss_pred ccccCcceEEEEeeceEEEEE-ecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCC
Q 029842 88 EHIHADEEIRYCLEGSGYFDV-RDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS 141 (187)
Q Consensus 88 eH~H~~~Ei~yileG~g~f~i-~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~ 141 (187)
.|.|..+|+.|||+|++.+.+ +++ .+.+++||.+++|+|..|.+.+.+.
T Consensus 63 ~~~~~~~E~~~Vl~G~~~l~~~~g~-----~~~l~~GD~~~ip~g~~h~~~~~~~ 112 (123)
T 3bcw_A 63 SNTTGYIEYCHIIEGEARLVDPDGT-----VHAVKAGDAFIMPEGYTGRWEVDRH 112 (123)
T ss_dssp CCCTTEEEEEEEEEEEEEEECTTCC-----EEEEETTCEEEECTTCCCEEEEEEE
T ss_pred eEcCCCcEEEEEEEEEEEEEECCCe-----EEEECCCCEEEECCCCeEEEEECCc
Confidence 566666999999999999999 555 7999999999999999999988653
No 76
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=98.56 E-value=1.6e-07 Score=85.50 Aligned_cols=82 Identities=17% Similarity=0.198 Sum_probs=65.0
Q ss_pred CCCeeeeeeeCcccccCHHHHhcCcccccccCcceEEEEeeceEEEEEecCCCc-E--------------------EEEE
Q 029842 61 GYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQ-W--------------------IRIW 119 (187)
Q Consensus 61 Gy~~~dvv~v~~~~~p~~~~~~~~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~-~--------------------~~~~ 119 (187)
|.. .-.++|.|. .+...|+|+..|+.||++|+|.+.+-..+.. . ....
T Consensus 62 gvs-~~r~~i~pg----------gl~~Ph~h~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~d~~q~~~~ 130 (459)
T 2e9q_A 62 GVN-MIRHTIRPK----------GLLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQKIRP 130 (459)
T ss_dssp TEE-EEEEEECTT----------EEEEEEEESSCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEEECCCEE
T ss_pred ceE-EEEEEEcCC----------CEecceecCCceEEEEEeeEEEEEEEeCCCcchhccchhhccccccccccccceeEE
Confidence 653 333666664 4578999999999999999999998643221 1 1468
Q ss_pred EeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 029842 120 IKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 153 (187)
Q Consensus 120 v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (187)
+++||++.||+|+.||..++++.++.++-+|...
T Consensus 131 l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~ 164 (459)
T 2e9q_A 131 FREGDLLVVPAGVSHWMYNRGQSDLVLIVFADTR 164 (459)
T ss_dssp EETTEEEEECTTCCEEEEECSSSCEEEEEEEESS
T ss_pred ecCCCEEEECCCCCEEEEeCCCCCEEEEEEecCC
Confidence 9999999999999999999988899999888743
No 77
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=98.55 E-value=1.9e-07 Score=85.56 Aligned_cols=82 Identities=13% Similarity=0.113 Sum_probs=65.4
Q ss_pred cCCCeeeeeeeCcccccCHHHHhcCcccccccCcceEEEEeeceEEEEEecCC------------------C------c-
Q 029842 60 RGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDES------------------D------Q- 114 (187)
Q Consensus 60 ~Gy~~~dvv~v~~~~~p~~~~~~~~~~~eH~H~~~Ei~yileG~g~f~i~~~~------------------d------~- 114 (187)
.|+ ..-.++|.|.. +...|+|+..|+.||++|+|.+.+-..+ . .
T Consensus 43 ~gv-~~~r~~i~pgg----------l~~Ph~~~~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~~~~~d~~ 111 (493)
T 2d5f_A 43 AGV-TVSKRTLNRNG----------LHLPSYSPYPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQQLQDSH 111 (493)
T ss_dssp HTC-EEEEEEECTTE----------EEEEEECSSCEEEEEEECEEEEEECCTTCCCCEEECC-------------CSEEE
T ss_pred CCE-EEEEEEeCCCc----------EeCceecCCCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccccccccc
Confidence 365 45557777753 5789999999999999999999987322 0 0
Q ss_pred EEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 029842 115 WIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 152 (187)
Q Consensus 115 ~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~ 152 (187)
.-...+++||+|.||+|+.||+.++.+.++.+|.+|..
T Consensus 112 qkv~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~ 149 (493)
T 2d5f_A 112 QKIRHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDT 149 (493)
T ss_dssp SCEEEEETTEEEEECTTCCEEEEECSSSCEEEEEEECT
T ss_pred ceEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEecC
Confidence 11348999999999999999999998889999999874
No 78
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.53 E-value=1.8e-07 Score=72.65 Aligned_cols=92 Identities=13% Similarity=0.113 Sum_probs=63.2
Q ss_pred cCcccccccC-cceEEEEeeceEEEEEecCCC---cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCceEE
Q 029842 83 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDESD---QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTA 158 (187)
Q Consensus 83 ~~~~~eH~H~-~~Ei~yileG~g~f~i~~~~d---~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~~gw~~ 158 (187)
...-..|.|+ .||++++++|++.+.+++.++ +--.+.+++|++++||.|+.|+..+.++. ++|-+=...-|=..
T Consensus 39 ~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~e~--~vLLiEp~nTGd~~ 116 (140)
T 3d0j_A 39 EGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQKDT--KMMYVQDSNCSMDN 116 (140)
T ss_dssp TTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEECTTC--EEEEEEESCCCGGG
T ss_pred ccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCCCce--EEEEEEeCCCCCCC
Confidence 3456789997 799999999999999994311 01269999999999999999999997664 33333222222111
Q ss_pred eCCCCCCcHHHHHHHHhhc
Q 029842 159 YNRPQEDHPARKEYIKGLT 177 (187)
Q Consensus 159 ~~r~~d~~~~r~~y~~~~~ 177 (187)
-.| ......+.++++.+.
T Consensus 117 se~-t~~~~~~i~~i~~~~ 134 (140)
T 3d0j_A 117 SDF-CDLSKEEIEYIQTNA 134 (140)
T ss_dssp EEE-EECCHHHHHHHHHHH
T ss_pred Ccc-ccCCHHHHHHHHHHH
Confidence 112 245677777777753
No 79
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=98.53 E-value=2.3e-07 Score=84.54 Aligned_cols=82 Identities=17% Similarity=0.248 Sum_probs=65.9
Q ss_pred CCCeeeeeeeCcccccCHHHHhcCcccccccCcceEEEEeeceEEEEEecCC-CcEE-----------------------
Q 029842 61 GYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDES-DQWI----------------------- 116 (187)
Q Consensus 61 Gy~~~dvv~v~~~~~p~~~~~~~~~~~eH~H~~~Ei~yileG~g~f~i~~~~-d~~~----------------------- 116 (187)
|+.... ++|.|. .+...|+|...|+.||++|+|.+.+-..+ .+.|
T Consensus 49 gvs~~R-~~i~P~----------gl~~Ph~h~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~~~~~~~~~~~~ 117 (465)
T 3qac_A 49 GVSVIR-RTIEPH----------GLLLPSFTSAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGEDERIREQGSRKF 117 (465)
T ss_dssp TCEEEE-EEECTT----------EEEEEEEESSCEEEEEEECEEEEEEECTTCCCCC-----------------------
T ss_pred ceEEEE-EEEcCC----------cCcccEEcCCCEEEEEEECcEEEEEecCCCCceeecchhcccccccccccccccccc
Confidence 765444 556664 46789999999999999999999986331 1222
Q ss_pred -------------EEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 029842 117 -------------RIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 153 (187)
Q Consensus 117 -------------~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (187)
...+++||+|.||+|+.||+.++.+.++.+|.+|...
T Consensus 118 ~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~ 167 (465)
T 3qac_A 118 GMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDTA 167 (465)
T ss_dssp -------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECTT
T ss_pred ccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCC
Confidence 4589999999999999999999989999999998764
No 80
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=98.51 E-value=2.7e-07 Score=82.54 Aligned_cols=78 Identities=14% Similarity=0.169 Sum_probs=64.9
Q ss_pred eeeeeeeCcccccCHHHHhcCcccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCE------EEeCCCCeeeee
Q 029842 64 YMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDL------IVLPAGIYHRFT 137 (187)
Q Consensus 64 ~~dvv~v~~~~~p~~~~~~~~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDl------IiIP~g~~H~f~ 137 (187)
..-.+++.|. .+...|+|..+|++||++|+|...+-+.++. ....+++||+ +.||+|+.||..
T Consensus 53 s~~~~~l~pg----------g~~~ph~~~a~ei~yVl~G~~~v~~v~~~~~-~~~~l~~GDv~~~~~~~~iP~G~~h~~~ 121 (397)
T 2phl_A 53 RLVEFRSKPE----------TLLLPQQADAELLLVVRSGSAILVLVKPDDR-REYFFLTSDNPIFSDHQKIPAGTIFYLV 121 (397)
T ss_dssp EEEEEEECSS----------EEEEEEEESEEEEEEEEESEEEEEEEETTTE-EEEEEEESSCTTSCSEEEECTTCEEEEE
T ss_pred EEEEEEECCC----------cCccCEecCCCeEEEEEeeeEEEEEEeCCCc-EEEEECCCCcccccceEEECCCCcEEEE
Confidence 3445666765 3467899999999999999999999766555 4889999999 999999999998
Q ss_pred eCC-CCcEEEEEEEcC
Q 029842 138 LDT-SNYVKLMRLFVG 152 (187)
Q Consensus 138 ~~~-~~~~~~ir~f~~ 152 (187)
+.+ +..+.+|.+|..
T Consensus 122 N~g~~~~l~~i~~~~~ 137 (397)
T 2phl_A 122 NPDPKEDLRIIQLAMP 137 (397)
T ss_dssp ECCSSCCEEEEEEEEE
T ss_pred eCCCCCCeEEEEeecC
Confidence 866 778999999864
No 81
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=98.51 E-value=2.5e-07 Score=85.12 Aligned_cols=83 Identities=19% Similarity=0.218 Sum_probs=66.7
Q ss_pred cCCCeeeeeeeCcccccCHHHHhcCcccccccCcceEEEEeeceEEEEEecCCCc-------------------------
Q 029842 60 RGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQ------------------------- 114 (187)
Q Consensus 60 ~Gy~~~dvv~v~~~~~p~~~~~~~~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~------------------------- 114 (187)
.|+. .-.++|.|. .+...|+|+..|++||++|+|.+.+-..+..
T Consensus 46 ~gvs-~~r~~i~p~----------gl~lPh~~~a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~~~~~~~ 114 (510)
T 3c3v_A 46 AGVA-LSRLVLRRN----------ALRRPFYSNAPQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQRPPRRLQEE 114 (510)
T ss_dssp HTCE-EEEEEECTT----------EEEEEEECSSCEEEEEEECCEEEEEECTTCCCCEEEECCC----------------
T ss_pred CcEE-EEEEEECCC----------CCccceecCCCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccccccccc
Confidence 3764 444666765 4578999999999999999999999864320
Q ss_pred ----------EEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 029842 115 ----------WIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 153 (187)
Q Consensus 115 ----------~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (187)
.....+++||+|.||+|+.||+.++.+.++.+|.+|...
T Consensus 115 ~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~ 163 (510)
T 3c3v_A 115 DQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTN 163 (510)
T ss_dssp ----CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTT
T ss_pred ccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCC
Confidence 012689999999999999999999988899999998654
No 82
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.50 E-value=1.8e-07 Score=79.37 Aligned_cols=70 Identities=17% Similarity=0.275 Sum_probs=57.7
Q ss_pred eeeeeeCcccccCHHHHhcCccc-ccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCc
Q 029842 65 MDLLDLCPEKVTNYEEKLKNFYT-EHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNY 143 (187)
Q Consensus 65 ~dvv~v~~~~~p~~~~~~~~~~~-eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~ 143 (187)
..++++.|+. ... .|.|..+|.+|||+|+|.|.++++ .+.|++||+|.+++|..|+|.+.++.+
T Consensus 193 ~~~~~l~pG~----------~i~~~~~h~~e~~~~il~G~~~~~~~~~-----~~~v~~GD~~~~~~~~~h~~~n~g~~~ 257 (278)
T 1sq4_A 193 VNIVNFEPGG----------VIPFAETHVMEHGLYVLEGKAVYRLNQD-----WVEVEAGDFMWLRAFCPQACYSGGPGR 257 (278)
T ss_dssp EEEEEECSSS----------EESCCCCCSEEEEEEEEECEEEEEETTE-----EEEEETTCEEEEEESCCEEEECCSSSC
T ss_pred EEEEEECCCC----------CcCCCCCCCccEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCCEEEEcCCCCC
Confidence 4456666643 334 366888999999999999999988 999999999999999999999977777
Q ss_pred EEEEEE
Q 029842 144 VKLMRL 149 (187)
Q Consensus 144 ~~~ir~ 149 (187)
++.|-+
T Consensus 258 ~~yl~~ 263 (278)
T 1sq4_A 258 FRYLLY 263 (278)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 777654
No 83
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=98.48 E-value=6.8e-07 Score=82.51 Aligned_cols=74 Identities=12% Similarity=0.234 Sum_probs=60.3
Q ss_pred CcccccccC-cceEEEEeeceEEEEEecCCC-cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEc-CCCceEE
Q 029842 84 NFYTEHIHA-DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFV-GEPVWTA 158 (187)
Q Consensus 84 ~~~~eH~H~-~~Ei~yileG~g~f~i~~~~d-~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~-~~~gw~~ 158 (187)
.....|+|+ ..|+.||++|++.+.+-+.++ .++...+++||+++||+|..|...++ +..+..+-|.+ ..++-..
T Consensus 405 gm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GDV~v~P~G~~H~~~ag-~e~l~flaF~ss~np~~~~ 481 (531)
T 3fz3_A 405 GIYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLFIVPQNHGVIQQAG-NQGFEYFAFKTEENAFINT 481 (531)
T ss_dssp CEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEE-EEEEEEEEEESSTTCCEEE
T ss_pred ccccceEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCeEEEECCCCeEEEecC-CCCEEEEEEecCCCCccee
Confidence 557899998 689999999999999987754 67899999999999999999977655 55677775555 4566543
No 84
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.46 E-value=7.4e-07 Score=71.52 Aligned_cols=58 Identities=29% Similarity=0.349 Sum_probs=49.5
Q ss_pred CcccccccCcceEEEEeeceEEEEEecCC---CcEEEEEEeCCCEEEeCCCCeeeeeeCCC
Q 029842 84 NFYTEHIHADEEIRYCLEGSGYFDVRDES---DQWIRIWIKAGDLIVLPAGIYHRFTLDTS 141 (187)
Q Consensus 84 ~~~~eH~H~~~Ei~yileG~g~f~i~~~~---d~~~~~~v~~GDlIiIP~g~~H~f~~~~~ 141 (187)
..+.+|.|+.+|++|+++|+....+.+.+ .+...+.+++||++++|+|++|+-...++
T Consensus 45 ~r~D~H~~~~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~~e 105 (176)
T 1zvf_A 45 ERTDYHINPTPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVPHSPVRFAD 105 (176)
T ss_dssp CCSCEEECSSCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCCEEEEECTT
T ss_pred cCCcCcCCCCceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCCcCCcccCC
Confidence 56889988899999999999999999732 14568999999999999999999866543
No 85
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=98.43 E-value=1.1e-06 Score=78.83 Aligned_cols=68 Identities=15% Similarity=0.206 Sum_probs=58.1
Q ss_pred CcccccccC-cceEEEEeeceEEEEEecCCC--------------cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEE
Q 029842 84 NFYTEHIHA-DEEIRYCLEGSGYFDVRDESD--------------QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMR 148 (187)
Q Consensus 84 ~~~~eH~H~-~~Ei~yileG~g~f~i~~~~d--------------~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir 148 (187)
.....|+|+ ..|+.||++|+|.+.+-+.++ +.+.-.+++||+++||+|..|+..+. ..+..+-
T Consensus 260 ~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~l~ 337 (416)
T 1uij_A 260 ALLLPHFNSKAIVILVINEGDANIELVGIKEQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT--SNLNFLA 337 (416)
T ss_dssp EEEEEEEESSCEEEEEEEESEEEEEEEEEC------------CCEEEEEEEEETTCEEEECTTCCEEEEES--SSEEEEE
T ss_pred cEecceEcCCCcEEEEEEeeEEEEEEEcCCCccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEE
Confidence 457899997 789999999999999987654 36777999999999999999999888 3688888
Q ss_pred EEcCC
Q 029842 149 LFVGE 153 (187)
Q Consensus 149 ~f~~~ 153 (187)
||+..
T Consensus 338 f~~~~ 342 (416)
T 1uij_A 338 FGINA 342 (416)
T ss_dssp EEETC
T ss_pred EEcCC
Confidence 88654
No 86
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=98.42 E-value=5.1e-07 Score=79.14 Aligned_cols=59 Identities=22% Similarity=0.187 Sum_probs=50.2
Q ss_pred CcccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEE
Q 029842 84 NFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 84 ~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~ 149 (187)
.....|.|+..|++||++|+|.+.|+++ ++.+++||+++||++..|.+.+++ ....+++
T Consensus 279 ~~~~~H~h~~~ev~~v~~G~g~~~v~~~-----~~~~~~GD~~~vP~~~~H~~~n~e--~~~l~~~ 337 (354)
T 2d40_A 279 FASRVARTTDSTIYHVVEGSGQVIIGNE-----TFSFSAKDIFVVPTWHGVSFQTTQ--DSVLFSF 337 (354)
T ss_dssp CBCCCBEESSCEEEEEEEEEEEEEETTE-----EEEEETTCEEEECTTCCEEEEEEE--EEEEEEE
T ss_pred CCCCceecCCcEEEEEEeCeEEEEECCE-----EEEEcCCCEEEECCCCeEEEEeCC--CEEEEEE
Confidence 3456799998899999999999999887 999999999999999999998853 3444444
No 87
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=98.40 E-value=2.3e-07 Score=67.09 Aligned_cols=64 Identities=16% Similarity=0.176 Sum_probs=52.3
Q ss_pred CcccccccC-cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEE
Q 029842 84 NFYTEHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 84 ~~~~eH~H~-~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~ 149 (187)
.....|.|. .+|++++++|++.+...+ +..-.+.+++||.+.||+|+.|+..+..+.++.+|.+
T Consensus 28 ~~~~~H~H~~~~e~~~v~~G~~~v~~~d--~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~IeV 92 (98)
T 3lag_A 28 SATGHHTHGMDYVVVPMADGEMTIVAPD--GTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEI 92 (98)
T ss_dssp EECCSEECCSCEEEEESSCBC-CEECTT--SCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEEEEE
T ss_pred CccCcEECCCcEEEEEEeccEEEEEeCC--CceEEEEecCCcEEEEcCCCcEECEECCCCeEEEEEE
Confidence 346799998 568888999999988764 2333567899999999999999999998889988876
No 88
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=98.40 E-value=7.8e-07 Score=80.88 Aligned_cols=70 Identities=10% Similarity=0.190 Sum_probs=59.6
Q ss_pred cCcccccccC-cceEEEEeeceEEEEEecCCC-cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 029842 83 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 153 (187)
Q Consensus 83 ~~~~~eH~H~-~~Ei~yileG~g~f~i~~~~d-~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (187)
+.....|+|+ ..|+.||++|++.+.+-+.++ +.+.-.|++||+++||+|..|+..++ +..+..+-+|...
T Consensus 332 G~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GDv~v~P~G~~H~~~ng-~~~~~~l~~~~s~ 403 (459)
T 2e9q_A 332 NAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLMIPQNFVVIKRAS-DRGFEWIAFKTND 403 (459)
T ss_dssp TCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEE-EEEEEEEEEESSS
T ss_pred CcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCcEEEECCCCEEEEEeC-CCCeEEEEEecCC
Confidence 4568899998 679999999999999997654 56777899999999999999999885 4568999998654
No 89
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=98.39 E-value=8.2e-07 Score=81.51 Aligned_cols=70 Identities=19% Similarity=0.226 Sum_probs=57.6
Q ss_pred CcccccccCcceEEEEeeceEEEEEecCC-CcEE--------------------EEEEeCCCEEEeCCCCeeeeeeCCCC
Q 029842 84 NFYTEHIHADEEIRYCLEGSGYFDVRDES-DQWI--------------------RIWIKAGDLIVLPAGIYHRFTLDTSN 142 (187)
Q Consensus 84 ~~~~eH~H~~~Ei~yileG~g~f~i~~~~-d~~~--------------------~~~v~~GDlIiIP~g~~H~f~~~~~~ 142 (187)
.+...|+|...||.||++|+|++.+-..+ .+.| ...+++||+|+||+|+.||..++.+.
T Consensus 57 gl~lPh~~~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~viPaG~~h~~~N~G~~ 136 (496)
T 3ksc_A 57 ALRRPYYSNAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDRHQKVNRFREGDIIAVPTGIVFWMYNDQDT 136 (496)
T ss_dssp EEEEEEEESSCEEEEEEECCEEEEEECTTCCCC---------------CCCCCCEEEECTTEEEEECTTCEEEEEECSSS
T ss_pred CEeCceEcCCCEEEEEEeCceEEEEEeCCCCccchhhhhcccccccccccchheeeccCCCCEEEECCCCcEEEEcCCCC
Confidence 45788999999999999999999995432 1222 23899999999999999999998888
Q ss_pred cEEEEEEEcCC
Q 029842 143 YVKLMRLFVGE 153 (187)
Q Consensus 143 ~~~~ir~f~~~ 153 (187)
++.+|-+|...
T Consensus 137 ~lv~v~~~d~~ 147 (496)
T 3ksc_A 137 PVIAVSLTDIR 147 (496)
T ss_dssp CEEEEEEECTT
T ss_pred CEEEEEEeccC
Confidence 99999887654
No 90
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=98.38 E-value=8.7e-07 Score=73.85 Aligned_cols=54 Identities=13% Similarity=0.196 Sum_probs=47.7
Q ss_pred CcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEE
Q 029842 92 ADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLF 150 (187)
Q Consensus 92 ~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f 150 (187)
..+|+.||++|++.+.++++ .+.+++||.+.+|+|++|++.+.++...+++-+.
T Consensus 80 ~~ee~~~Vl~G~l~~~~~~~-----~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l~v~ 133 (261)
T 1rc6_A 80 GIETFLYVISGNITAKAEGK-----TFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYK 133 (261)
T ss_dssp TEEEEEEEEESEEEEEETTE-----EEEEETTEEEEECTTCCCEEEECSSSCEEEEEEE
T ss_pred CceEEEEEEEeEEEEEECCE-----EEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEE
Confidence 46899999999999999988 9999999999999999999999776666666553
No 91
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=98.37 E-value=1.2e-06 Score=78.33 Aligned_cols=68 Identities=15% Similarity=0.185 Sum_probs=59.5
Q ss_pred CcccccccC-cceEEEEeeceEEEEEecC------CC-cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 029842 84 NFYTEHIHA-DEEIRYCLEGSGYFDVRDE------SD-QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 153 (187)
Q Consensus 84 ~~~~eH~H~-~~Ei~yileG~g~f~i~~~------~d-~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (187)
.....|+|+ ..|+.||++|+|.+.+-+. ++ +.+...+++||+++||+|..|+..+.+ .+..+-|+...
T Consensus 250 ~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~GDV~vvP~G~~h~~~n~~--~l~~l~f~~~s 325 (397)
T 2phl_A 250 ALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSKDDVFVIPAAYPVAIKATS--NVNFTGFGINA 325 (397)
T ss_dssp EEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEETTCEEEECTTCCEEEEESS--SEEEEEEEESC
T ss_pred cEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecCCCEEEECCCCeEEEEeCC--CeEEEEEECCC
Confidence 557899997 7899999999999999976 44 799999999999999999999999885 67878877764
No 92
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=98.33 E-value=3.9e-06 Score=76.99 Aligned_cols=74 Identities=14% Similarity=0.184 Sum_probs=61.6
Q ss_pred cCcccccccC-cceEEEEeeceEEEEEecCC-CcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC-CceE
Q 029842 83 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDES-DQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE-PVWT 157 (187)
Q Consensus 83 ~~~~~eH~H~-~~Ei~yileG~g~f~i~~~~-d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~-~gw~ 157 (187)
+.....|+|+ ..|+.||++|++.+.+-+.+ .+++.-.+++||+++||+|..|.-.++ +..+..+-||+.. ++-.
T Consensus 368 Ggm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~~~a~-~e~~~~l~f~~s~np~~~ 444 (496)
T 3ksc_A 368 NAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVPQNYAVAAKSL-SDRFSYVAFKTNDRAGIA 444 (496)
T ss_dssp TCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEC-SSEEEEEEEESSTTCCEE
T ss_pred CeEECCeeCCCCCEEEEEEeceEEEEEEeCCCcEEEEEEecCCeEEEECCCCEEEEEeC-CCCEEEEEEECCCCCccc
Confidence 4678999997 68999999999999998765 467888999999999999999977666 5678899998543 5444
No 93
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=98.33 E-value=3e-07 Score=70.89 Aligned_cols=76 Identities=13% Similarity=0.030 Sum_probs=55.6
Q ss_pred eeeeeeCcccccCHHHHhcCcccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcE
Q 029842 65 MDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYV 144 (187)
Q Consensus 65 ~dvv~v~~~~~p~~~~~~~~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~ 144 (187)
.-++++.|.. .+..|.|...|..|||+|+..+..++..+ ...+++||++.+|+|..|......+. .
T Consensus 46 ~~~~~~~pG~----------~~p~H~H~~~ee~~VL~G~~~~~~g~~~~---~~~~~~Gd~~~~p~g~~H~p~~~~e~-~ 111 (145)
T 2o1q_A 46 TAIFDCPAGS----------SFAAHVHVGPGEYFLTKGKMDVRGGKAAG---GDTAIAPGYGYESANARHDKTEFPVA-S 111 (145)
T ss_dssp EEEEEECTTE----------EECCEEESSCEEEEEEEEEEEETTCGGGT---SEEEESSEEEEECTTCEESCCEEEEE-E
T ss_pred EEEEEECCCC----------CCCccCCCCCEEEEEEEeEEEEcCCCEec---ceEeCCCEEEEECcCCccCCeECCCC-e
Confidence 4567777653 47899999888899999999987665410 27899999999999999995332222 4
Q ss_pred EEEEEEcCCC
Q 029842 145 KLMRLFVGEP 154 (187)
Q Consensus 145 ~~ir~f~~~~ 154 (187)
.++.+|...-
T Consensus 112 ~~l~~~~gp~ 121 (145)
T 2o1q_A 112 EFYMSFLGPL 121 (145)
T ss_dssp EEEEEEESCE
T ss_pred EEEEEECCcc
Confidence 5566666554
No 94
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=98.32 E-value=1.6e-06 Score=72.98 Aligned_cols=54 Identities=9% Similarity=0.103 Sum_probs=47.3
Q ss_pred cCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEE
Q 029842 91 HADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 91 H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~ 149 (187)
|..+|+.||++|++.+.++++ .+.+++||.+.+|+|++|++.+..+...+++-+
T Consensus 82 ~~~ee~~~Vl~G~l~~~~~~~-----~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l~v 135 (274)
T 1sef_A 82 DGIQTLVYVIDGRLRVSDGQE-----THELEAGGYAYFTPEMKMYLANAQEADTEVFLY 135 (274)
T ss_dssp TTEEEEEEEEESEEEEECSSC-----EEEEETTEEEEECTTSCCEEEESSSSCEEEEEE
T ss_pred CCceEEEEEEEeEEEEEECCE-----EEEECCCCEEEECCCCCEEEEeCCCCCEEEEEE
Confidence 347899999999999999988 999999999999999999999977666655544
No 95
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=98.31 E-value=2.1e-06 Score=77.48 Aligned_cols=68 Identities=18% Similarity=0.204 Sum_probs=57.6
Q ss_pred CcccccccC-cceEEEEeeceEEEEEecCCC-------------cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEE
Q 029842 84 NFYTEHIHA-DEEIRYCLEGSGYFDVRDESD-------------QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 84 ~~~~eH~H~-~~Ei~yileG~g~f~i~~~~d-------------~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~ 149 (187)
.....|+|+ ..|+.||++|+|.+.+-+.++ +.+.-.+++||+++||+|..|+..++ ..+.++-|
T Consensus 277 ~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~v~f 354 (434)
T 2ea7_A 277 ALLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINAT--SNLNFFAF 354 (434)
T ss_dssp EEEEEEEESSCEEEEEEEESCEEEEEEEEEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEE
T ss_pred eeeccEEcCCCCEEEEEEeeEEEEEEEecCccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEE
Confidence 457899997 789999999999999987643 26677999999999999999999988 35888888
Q ss_pred EcCC
Q 029842 150 FVGE 153 (187)
Q Consensus 150 f~~~ 153 (187)
+...
T Consensus 355 ~~~~ 358 (434)
T 2ea7_A 355 GINA 358 (434)
T ss_dssp EETC
T ss_pred ECCC
Confidence 8665
No 96
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.29 E-value=9.6e-07 Score=75.15 Aligned_cols=79 Identities=14% Similarity=0.075 Sum_probs=59.8
Q ss_pred eeeeeeCcccccCHHHHhcCcccccccCcceEEEEeeceEEEEEe-cCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCc
Q 029842 65 MDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVR-DESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNY 143 (187)
Q Consensus 65 ~dvv~v~~~~~p~~~~~~~~~~~eH~H~~~Ei~yileG~g~f~i~-~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~ 143 (187)
.=++++.|+. ....|.|..+|+.||++|++.+.++ ++ .+.+++||.+.+|+|..|++.+.....
T Consensus 72 ~~lv~l~PGg----------~s~~~~h~~EEfiyVleG~l~l~l~~g~-----~~~L~~Gds~y~p~~~~H~~~N~~~Ar 136 (266)
T 4e2q_A 72 MYLAKMKEMS----------SSGLPPQDIERLIFVVEGAVTLTNTSSS-----SKKLTVDSYAYLPPNFHHSLDCVESAT 136 (266)
T ss_dssp EEEEEECSSE----------ECCCCCTTEEEEEEEEEECEEEEC--CC-----CEEECTTEEEEECTTCCCEEEESSCEE
T ss_pred EEEEEECcCC----------cCCCCCCCCeEEEEEEEEEEEEEECCCc-----EEEEcCCCEEEECCCCCEEEEeCCCEE
Confidence 3466666653 1345788899999999999999998 78 899999999999999999999865433
Q ss_pred EEEE-EEEcCCCceEE
Q 029842 144 VKLM-RLFVGEPVWTA 158 (187)
Q Consensus 144 ~~~i-r~f~~~~gw~~ 158 (187)
+..+ +-|...+|..|
T Consensus 137 ~l~V~k~y~~~~g~~p 152 (266)
T 4e2q_A 137 LVVFERRYEYLGSHTT 152 (266)
T ss_dssp EEEEEEECCCCTTCCC
T ss_pred EEEEEeEeeeCCCCCC
Confidence 4333 33666677443
No 97
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=98.28 E-value=5.8e-07 Score=65.19 Aligned_cols=63 Identities=13% Similarity=0.112 Sum_probs=48.3
Q ss_pred cccccccCc-ceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEE
Q 029842 85 FYTEHIHAD-EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 85 ~~~eH~H~~-~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~ 149 (187)
...+|.|.. +++.++++|++.+... ++..-.+.+++||.+.+|+|+.|++.+.++.++..|-+
T Consensus 29 ~~~~H~H~~~~~iv~v~~G~~~~~~~--dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~v 92 (98)
T 2ozi_A 29 ATGHHTHGMDYVVVPMADGEMTIVAP--DGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEI 92 (98)
T ss_dssp ECCSEECCSCEEEEESSCBC-CEECT--TSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEEE
T ss_pred ccCcEeCCCCEEEEEEeeEEEEEEeC--CCcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEEE
Confidence 457999974 4666677888887764 33323578999999999999999999988878877765
No 98
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=98.27 E-value=3.1e-06 Score=77.17 Aligned_cols=74 Identities=12% Similarity=0.205 Sum_probs=61.6
Q ss_pred cCcccccccC-cceEEEEeeceEEEEEecCCC-cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC-CceE
Q 029842 83 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE-PVWT 157 (187)
Q Consensus 83 ~~~~~eH~H~-~~Ei~yileG~g~f~i~~~~d-~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~-~gw~ 157 (187)
+.....|+|+ ..|+.||++|++...+-+.++ +++.-.+++||+++||.|..|.-.++ +..+.++-+|+.. ++-.
T Consensus 333 Ggm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~~~ag-~e~~~~l~~f~s~np~~~ 409 (466)
T 3kgl_A 333 NAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIPQGFSVVKRAT-SEQFRWIEFKTNANAQIN 409 (466)
T ss_dssp TEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEC-SSEEEEEEEESSSSCCEE
T ss_pred CcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcEEEECCCCeEEEEcC-CCCEEEEEEECCCCCccc
Confidence 3567899996 689999999999999997754 57889999999999999999987655 4569999998765 4433
No 99
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=98.27 E-value=3.8e-06 Score=76.55 Aligned_cols=74 Identities=15% Similarity=0.306 Sum_probs=61.4
Q ss_pred cCcccccccC-cceEEEEeeceEEEEEecCC-CcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC-CceE
Q 029842 83 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDES-DQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE-PVWT 157 (187)
Q Consensus 83 ~~~~~eH~H~-~~Ei~yileG~g~f~i~~~~-d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~-~gw~ 157 (187)
+.....|+|+ ..|+.||++|++.+.+-+.+ .+.+...+++||+++||.|..|.-.++ +..+..+-||+.. ++-+
T Consensus 333 Ggm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~GDVfvvP~g~~h~~~ag-~e~~~~l~f~~s~np~~~ 409 (465)
T 3qac_A 333 NAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSRGQLVVVPQNFAIVKQAF-EDGFEWVSFKTSENAMFQ 409 (465)
T ss_dssp TCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEE-EEEEEEEEEESSTTCCEE
T ss_pred CcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecCCeEEEECCCcEEEEEcC-CCCeEEEEEecCCCCccc
Confidence 3567899997 68999999999999998775 468888999999999999999988765 4568899888643 5433
No 100
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=98.17 E-value=6.8e-06 Score=73.89 Aligned_cols=68 Identities=15% Similarity=0.262 Sum_probs=55.4
Q ss_pred CcccccccC-cceEEEEeeceEEEEEecCCC-------------------------cEEEEEEeCCCEEEeCCCCeeeee
Q 029842 84 NFYTEHIHA-DEEIRYCLEGSGYFDVRDESD-------------------------QWIRIWIKAGDLIVLPAGIYHRFT 137 (187)
Q Consensus 84 ~~~~eH~H~-~~Ei~yileG~g~f~i~~~~d-------------------------~~~~~~v~~GDlIiIP~g~~H~f~ 137 (187)
.....|+|+ ..|+.||++|+|.+.+-+.++ +.+...+++||+++||+|.+||..
T Consensus 274 g~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~ 353 (418)
T 3s7i_A 274 ALMLPHFNSKAMVIVVVNKGTGNLELVAVRKEQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAIN 353 (418)
T ss_dssp EEEEEEEESSCEEEEEEEECCEEEEEEEEEEC-------------------CCEEEEEEEEEECTTCEEEECTTCCEEEE
T ss_pred ceeCceecCCCCEEEEEEeCeEEEEEEeCCCccccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEE
Confidence 457889995 799999999999998875432 477899999999999999999988
Q ss_pred eCCCCcEEEEEEEcCC
Q 029842 138 LDTSNYVKLMRLFVGE 153 (187)
Q Consensus 138 ~~~~~~~~~ir~f~~~ 153 (187)
+++ ++..+-|+...
T Consensus 354 ~~~--~l~~v~f~~~~ 367 (418)
T 3s7i_A 354 ASS--ELHLLGFGINA 367 (418)
T ss_dssp ESS--CEEEEEEEESC
T ss_pred CCC--CEEEEEEEcCC
Confidence 765 37777665444
No 101
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=98.16 E-value=3e-06 Score=69.93 Aligned_cols=53 Identities=15% Similarity=0.221 Sum_probs=45.4
Q ss_pred CcccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeC
Q 029842 84 NFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLD 139 (187)
Q Consensus 84 ~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~ 139 (187)
..+..|.|++.|+.||++|+|. .+++... ..+.+.+||+++||||..|.+...
T Consensus 20 ~~~~~~~~~~~~i~~v~~G~~~-~i~~~~~--~~~~l~~g~l~~i~p~~~h~~~~~ 72 (276)
T 3gbg_A 20 YIFNNLYINDYKMFWIDSGIAK-LIDKNCL--VSYEINSSSIILLKKNSIQRFSLT 72 (276)
T ss_dssp EEEEEEECSSCEEEEESSSCEE-EEETTTT--EEEEECTTEEEEECTTCEEEEEEE
T ss_pred hhccHhhhcceEEEEEecCceE-EECCccc--eeEEEcCCCEEEEcCCCceeeccc
Confidence 4578899999999999999999 9985411 137899999999999999999866
No 102
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=98.14 E-value=1.2e-05 Score=72.71 Aligned_cols=69 Identities=17% Similarity=0.253 Sum_probs=57.6
Q ss_pred cCcccccccC-cceEEEEeeceEEEEEecCCC---------c--EEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEE
Q 029842 83 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDESD---------Q--WIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLF 150 (187)
Q Consensus 83 ~~~~~eH~H~-~~Ei~yileG~g~f~i~~~~d---------~--~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f 150 (187)
+.....|+|+ ..|+.||++|++++.+-+.++ . .+...+++||+++||.|..|+-.++ + .+.++-|+
T Consensus 291 g~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~-~-~~~~v~f~ 368 (445)
T 2cav_A 291 GALFVPHYNSRATVILVANEGRAEVELVGLEQQQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA-S-DLNMVGIG 368 (445)
T ss_dssp TEEEEEEEESSCEEEEEEEESCEEEEEEEC-----------CCEEEEEEECTTCEEEECTTCCEEEEES-S-SEEEEEEE
T ss_pred CceeeeEECCCCcEEEEEEeeEEEEEEEeCCCcccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC-C-CeEEEEEE
Confidence 3568899997 799999999999999987653 3 6899999999999999999999888 3 47777777
Q ss_pred cCC
Q 029842 151 VGE 153 (187)
Q Consensus 151 ~~~ 153 (187)
+..
T Consensus 369 ~~~ 371 (445)
T 2cav_A 369 VNA 371 (445)
T ss_dssp ESC
T ss_pred ccC
Confidence 544
No 103
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.11 E-value=5e-06 Score=73.70 Aligned_cols=52 Identities=17% Similarity=0.269 Sum_probs=48.5
Q ss_pred CcccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCC
Q 029842 84 NFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT 140 (187)
Q Consensus 84 ~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~ 140 (187)
.-...|.|...+|++|++|+|...|+++ ++.+++||+++||++..|++.+++
T Consensus 290 ~~t~~hRht~s~Vy~V~eG~G~~~I~~~-----~~~w~~gD~fvvP~w~~h~~~n~~ 341 (368)
T 3nw4_A 290 TETATRNEVGSTVFQVFEGAGAVVMNGE-----TTKLEKGDMFVVPSWVPWSLQAET 341 (368)
T ss_dssp CBCCCEEESSCEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTCCEEEEESS
T ss_pred CccCCeeccccEEEEEEeCcEEEEECCE-----EEEecCCCEEEECCCCcEEEEeCC
Confidence 4568899999999999999999999998 999999999999999999998874
No 104
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.10 E-value=1.1e-05 Score=69.14 Aligned_cols=59 Identities=24% Similarity=0.296 Sum_probs=50.1
Q ss_pred CcccccccC-cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcE
Q 029842 84 NFYTEHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYV 144 (187)
Q Consensus 84 ~~~~eH~H~-~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~ 144 (187)
..+.+| |+ .+|++|+++|.....+.+. ++.-.+.+++||+.++|+|++|+-...++...
T Consensus 42 ~R~d~H-~~~~dE~FyqlkG~m~l~~~d~-g~~~~V~i~eGemfllP~gv~HsP~r~~et~g 101 (286)
T 2qnk_A 42 TRKDYH-IEEGEEVFYQLEGDMVLRVLEQ-GKHRDVVIRQGEIFLLPARVPHSPQRFANTVG 101 (286)
T ss_dssp CCCCEE-ECSSCEEEEEEESCEEEEEEET-TEEEEEEECTTEEEEECTTCCEEEEECTTCEE
T ss_pred cCccCc-CCCCCeEEEEEeCeEEEEEEeC-CceeeEEECCCeEEEeCCCCCcCCcccCCeEE
Confidence 457899 75 7999999999999999963 55667999999999999999999988665443
No 105
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=98.08 E-value=1e-05 Score=73.74 Aligned_cols=70 Identities=14% Similarity=0.236 Sum_probs=56.8
Q ss_pred CcccccccCcceEEEEeeceEEEEEecCCC-cEE----------------------------------------------
Q 029842 84 NFYTEHIHADEEIRYCLEGSGYFDVRDESD-QWI---------------------------------------------- 116 (187)
Q Consensus 84 ~~~~eH~H~~~Ei~yileG~g~f~i~~~~d-~~~---------------------------------------------- 116 (187)
.+...|+|+..|+.||++|+|++.+-..+. +-+
T Consensus 54 Gl~lPh~~~a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (466)
T 3kgl_A 54 GLYLPSFFSTAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSPFGEGQGQGQQGQGQGHQGQGQGQQGQQGQQGQQ 133 (466)
T ss_dssp EEEEEEEESSCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC------------------------------------
T ss_pred CEeCCeeCCCCeEEEEEeCeEEEEEecCCCcchhhccccccccccccccccccccccccccccccccccccccccccccc
Confidence 468899999999999999999988753210 000
Q ss_pred ------------EEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 029842 117 ------------RIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 153 (187)
Q Consensus 117 ------------~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (187)
...+++||+|.||+|+.||..++.+.++.++-++...
T Consensus 134 ~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~d~~ 182 (466)
T 3kgl_A 134 SQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVLDLA 182 (466)
T ss_dssp -----CCEEESCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEEESS
T ss_pred cccccccccceeeccccCCCEEEECCCCcEEEEeCCCCcEEEEEEEcCC
Confidence 1488999999999999999999888899999887543
No 106
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=98.05 E-value=1.7e-05 Score=71.33 Aligned_cols=71 Identities=11% Similarity=0.209 Sum_probs=53.6
Q ss_pred CcccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeC-CCCcEEEEE--EEcCCCc
Q 029842 84 NFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLD-TSNYVKLMR--LFVGEPV 155 (187)
Q Consensus 84 ~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~-~~~~~~~ir--~f~~~~g 155 (187)
.+...|.....|++||++|+|...+-+. +......+++||++.||+|+.||..+. ++..+.++- +.+..||
T Consensus 55 gl~~Phh~~A~ei~yV~~G~g~~g~V~~-~~~~~~~l~~GDv~~~P~G~~h~~~N~g~~~~l~i~~l~~~s~~pg 128 (418)
T 3s7i_A 55 TLVLPKHADADNILVIQQGQATVTVANG-NNRKSFNLDEGHALRIPSGFISYILNRHDNQNLRVAKISMPVNTPG 128 (418)
T ss_dssp EEEEEEEESEEEEEEEEESEEEEEEECS-SCEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTT
T ss_pred ceeeeeeCCCCeEEEEEEeeEEEEEEec-CCEEEEEecCCCEEEECCCCeEEEEecCCCccEEEEEeecCcCCCC
Confidence 4567783358999999999999999765 445578999999999999999999884 444555554 3333354
No 107
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.04 E-value=8.1e-06 Score=65.92 Aligned_cols=58 Identities=19% Similarity=0.162 Sum_probs=46.3
Q ss_pred cCcccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEE
Q 029842 83 KNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 83 ~~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~ 149 (187)
+..+..|+|...|+.|||+|+.. ++ .-.+.+||++.+|+|..|...+++...+.++-+
T Consensus 135 G~~~p~H~H~g~E~~~VL~G~f~----de-----~~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~~ 192 (195)
T 2q1z_B 135 GQAVPDHGHRGLELTLVLQGAFR----DE-----TDRFGAGDIEIADQELEHTPVAERGLDCICLAA 192 (195)
T ss_dssp TCBCCCCCCSSCEEEEEEESEEE----CS-----SSEEETTCEEEECSSCCCCCEECSSSCEEEEEE
T ss_pred CCCCCCcCCCCeEEEEEEEEEEE----CC-----cEEECCCeEEEeCcCCccCCEeCCCCCEEEEEE
Confidence 35688999999999999999833 44 357889999999999999999975555555543
No 108
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=97.98 E-value=1.2e-05 Score=66.71 Aligned_cols=42 Identities=26% Similarity=0.332 Sum_probs=40.4
Q ss_pred cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeC
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLD 139 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~ 139 (187)
.+|+.||++|++.+.++++ .+.+++||.+.+|+|++|++.+.
T Consensus 68 ~ee~~~Vl~G~~~~~~~~~-----~~~l~~Gd~~~~p~~~~H~~~n~ 109 (246)
T 1sfn_A 68 YQRFAFVLSGEVDVAVGGE-----TRTLREYDYVYLPAGEKHMLTAK 109 (246)
T ss_dssp SEEEEEEEEEEEEEECSSC-----EEEECTTEEEEECTTCCCEEEEE
T ss_pred eeEEEEEEECEEEEEECCE-----EEEECCCCEEEECCCCCEEEEeC
Confidence 7899999999999999988 99999999999999999999987
No 109
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=97.97 E-value=1.5e-05 Score=62.68 Aligned_cols=100 Identities=16% Similarity=0.183 Sum_probs=66.1
Q ss_pred eeeeeeeCcccccCHHHHhcCcccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeC--CC
Q 029842 64 YMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLD--TS 141 (187)
Q Consensus 64 ~~dvv~v~~~~~p~~~~~~~~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~--~~ 141 (187)
..-++.+.|+ ..+..|.|...|..|||+|+..|. +. + ..+.+||++..|+|..|...+. ++
T Consensus 43 ~v~lvr~~pG----------~~~p~H~H~g~ee~~VL~G~~~~~--e~-~----~~~~~Gd~~~~P~g~~H~~~~~~~~~ 105 (159)
T 3ebr_A 43 TITLLKAPAG----------MEMPRHHHTGTVIVYTVQGSWRYK--EH-D----WVAHAGSVVYETASTRHTPQSAYAEG 105 (159)
T ss_dssp EEEEEEECSS----------CBCCCEEESSCEEEEEEESCEEET--TS-S----CCBCTTCEEEECSSEEECEEESSSSS
T ss_pred EEEEEEECCC----------CCcccccCCCCEEEEEEEeEEEEe--CC-C----eEECCCeEEEECCCCcceeEeCCCCC
Confidence 4566777765 457899999999999999998875 22 2 3788999999999999999887 44
Q ss_pred CcEEEEE------EEcCCCceEEeCCCCCCcHHHHHHHHhhcCCCCCC
Q 029842 142 NYVKLMR------LFVGEPVWTAYNRPQEDHPARKEYIKGLTGQAGVP 183 (187)
Q Consensus 142 ~~~~~ir------~f~~~~gw~~~~r~~d~~~~r~~y~~~~~~~~~~~ 183 (187)
....++- .|.++.|.+- ++ .|.-.....|.+.. ++.|++
T Consensus 106 e~~~~~~~~~G~l~~~~~~g~~~-~~-~d~~~~~~~~~~~~-~~~g~~ 150 (159)
T 3ebr_A 106 PDIITFNIVAGELLYLDDKDNII-AV-ENWKTSMDRYLNYC-KAHGIR 150 (159)
T ss_dssp SCEEEEEEEESCEEEECTTCCEE-EE-ECHHHHHHHHHHHH-HHTTCC
T ss_pred CCEEEEEEecCccEecCCCCCEE-EE-cCHHHHHHHHHHHH-HHcCCC
Confidence 4444443 2444444443 11 24444445555554 444443
No 110
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=97.89 E-value=1.9e-05 Score=63.43 Aligned_cols=60 Identities=25% Similarity=0.405 Sum_probs=46.8
Q ss_pred cCcccccccCc-------ceEEEEeeceEEEEEecCCC----------------cEEEEEEeCCCEEEeCCCCeeeeeeC
Q 029842 83 KNFYTEHIHAD-------EEIRYCLEGSGYFDVRDESD----------------QWIRIWIKAGDLIVLPAGIYHRFTLD 139 (187)
Q Consensus 83 ~~~~~eH~H~~-------~Ei~yileG~g~f~i~~~~d----------------~~~~~~v~~GDlIiIP~g~~H~f~~~ 139 (187)
++..++|.|.. .|-++|+.|.+++.+.+..- -+=.+.++|||.+.||+|++|+|.++
T Consensus 63 GQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIppg~~H~f~ag 142 (175)
T 2y0o_A 63 GQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIPPNTKHWFQAG 142 (175)
T ss_dssp TCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEECTTCCEEEEEE
T ss_pred CCcCCceECCCCCCCCCCceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEEECCCCcEEEEeC
Confidence 35678999964 67777999999999975420 01247999999999999999999995
Q ss_pred CCC
Q 029842 140 TSN 142 (187)
Q Consensus 140 ~~~ 142 (187)
+.+
T Consensus 143 eeg 145 (175)
T 2y0o_A 143 EEG 145 (175)
T ss_dssp EEE
T ss_pred CCC
Confidence 543
No 111
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.78 E-value=0.00012 Score=61.32 Aligned_cols=69 Identities=14% Similarity=0.089 Sum_probs=53.0
Q ss_pred cCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEc-----CCCceEEeCCCCCC
Q 029842 91 HADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFV-----GEPVWTAYNRPQED 165 (187)
Q Consensus 91 H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~-----~~~gw~~~~r~~d~ 165 (187)
++.+|+.|||+|+.....+++ .+.+++||+++||+|+.|.+...+.-....++ +. ..+|=+++.+..+-
T Consensus 63 ~p~dE~~~VleG~~~lt~~g~-----~~~~~~Gd~~~ip~G~~~~w~~~~~~~~~y~~-~~~~~~p~~~~~~~i~~~~~l 136 (238)
T 3myx_A 63 YPYTEMLVMHRGSVTLTSGTD-----SVTLSTGESAVIGRGTQVRIDAQPESLWAFCA-STQASGPDKSGITALDRLALL 136 (238)
T ss_dssp CSSEEEEEEEESEEEEEETTE-----EEEEETTCEEEECTTCCEEEEECTTEEEEEEE-ECSCCSCCCCSEEEECTTCCC
T ss_pred CCCcEEEEEEEeEEEEECCCe-----EEEEcCCCEEEECCCCEEEEEecCCeEEEEEe-ccCCCCCCCCccEEecCCCCC
Confidence 455899999999999988766 89999999999999999999988765443333 33 23566666655443
No 112
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=97.72 E-value=2e-05 Score=62.37 Aligned_cols=60 Identities=20% Similarity=0.276 Sum_probs=47.5
Q ss_pred eeeeeeCcccccCHHHHhcCcccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCC
Q 029842 65 MDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT 140 (187)
Q Consensus 65 ~dvv~v~~~~~p~~~~~~~~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~ 140 (187)
.-++.+.|+ ..+..|.|...|..|||+|+..+. ++. ...+++||++.+|+|..|...+.+
T Consensus 45 v~lvr~~pG----------~~~p~H~H~g~ee~~VL~G~f~~~-~~~-----~~~~~aGd~~~~P~g~~H~~~a~~ 104 (165)
T 3cjx_A 45 VMRASFAPG----------LTLPLHFHTGTVHMYTISGCWYYT-EYP-----GQKQTAGCYLYEPGGSIHQFNTPR 104 (165)
T ss_dssp EEEEEECTT----------CBCCEEEESSCEEEEEEESEEEET-TCT-----TSCEETTEEEEECTTCEECEECCT
T ss_pred EEEEEECCC----------CcCCcccCCCCEEEEEEEEEEEEC-CCc-----eEEECCCeEEEeCCCCceeeEeCC
Confidence 456667664 457899999999999999998873 211 256789999999999999998754
No 113
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.71 E-value=0.00012 Score=54.91 Aligned_cols=50 Identities=20% Similarity=0.296 Sum_probs=41.0
Q ss_pred ccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCC
Q 029842 88 EHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS 141 (187)
Q Consensus 88 eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~ 141 (187)
.+.+..+|+.|||+|++.+...+.. .+.+++||++++|+|..-..+..+.
T Consensus 56 ~~~~~~~E~~~iLeG~~~lt~ddG~----~~~l~aGD~~~~P~G~~gtWev~e~ 105 (116)
T 3es4_A 56 YAGRDLEETFVVVEGEALYSQADAD----PVKIGPGSIVSIAKGVPSRLEILSS 105 (116)
T ss_dssp ECCCSEEEEEEEEECCEEEEETTCC----CEEECTTEEEEECTTCCEEEEECSC
T ss_pred CeeCCCcEEEEEEEeEEEEEeCCCe----EEEECCCCEEEECCCCeEEEEEeEE
Confidence 3445567999999999999986432 7899999999999999988876653
No 114
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=97.68 E-value=6.2e-05 Score=69.51 Aligned_cols=34 Identities=26% Similarity=0.390 Sum_probs=30.3
Q ss_pred EEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEc
Q 029842 118 IWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFV 151 (187)
Q Consensus 118 ~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~ 151 (187)
..+++||+|.||+|+.||.+++.+.++.+|-++.
T Consensus 174 ~~vr~GDviaiPaG~~~w~yN~G~~~l~iv~~~D 207 (531)
T 3fz3_A 174 RRIREGDVVAIPAGVAYWSYNDGDQELVAVNLFH 207 (531)
T ss_dssp EEEETTEEEEECTTCCEEEECCSSSCEEEEEEEE
T ss_pred ecccCCcEEEECCCCeEEEEeCCCceEEEEEEEc
Confidence 4789999999999999999999988888887763
No 115
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=97.53 E-value=0.00042 Score=59.04 Aligned_cols=66 Identities=17% Similarity=0.237 Sum_probs=52.2
Q ss_pred CcccccccC-cceEEEEeeceEEEEEecC-CCcEEEEEEe--CCCEEEeCCCCeeeeeeCCCCcEEEEEE
Q 029842 84 NFYTEHIHA-DEEIRYCLEGSGYFDVRDE-SDQWIRIWIK--AGDLIVLPAGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 84 ~~~~eH~H~-~~Ei~yileG~g~f~i~~~-~d~~~~~~v~--~GDlIiIP~g~~H~f~~~~~~~~~~ir~ 149 (187)
.....|.|. ..|.++|++|++.+.+++. .++|+.+.+. ..+.+.||+|..|.+.+.++....++-+
T Consensus 283 ~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~~~ 352 (369)
T 3st7_A 283 ITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTIMW 352 (369)
T ss_dssp CEEEEEECSSCCEEEEEEESEEEEEEEETTCCCCEEEEEETTBCCEEEECTTEEEEEEECSSSCEEEEEE
T ss_pred ceeccccccCcceEEEEEeeeEEEEEEcCCCCcEEEEEecCCcceEEEeCCCceEEeEEcCCCcEEEEEe
Confidence 456889997 6799999999999999865 4567777663 3399999999999999977666655544
No 116
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=97.48 E-value=0.00019 Score=59.20 Aligned_cols=64 Identities=20% Similarity=0.233 Sum_probs=48.8
Q ss_pred eeeeeCcccccCHHHHhcCcccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEE
Q 029842 66 DLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVK 145 (187)
Q Consensus 66 dvv~v~~~~~p~~~~~~~~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~ 145 (187)
-++.+.|+ ..+..|+|+..|..|||+|+.. +. .-.+.+||++.+|+|+.|...+ ++..+.
T Consensus 46 ~lvr~~pG----------~~~p~H~H~g~Ee~~VL~G~f~----d~-----~~~~~~Gd~~~~P~g~~H~p~a-~~gc~~ 105 (223)
T 3o14_A 46 SIVRYAPG----------SRFSAHTHDGGEEFIVLDGVFQ----DE-----HGDYPAGTYVRNPPTTSHVPGS-AEGCTI 105 (223)
T ss_dssp EEEEECTT----------EECCCEECTTCEEEEEEEEEEE----ET-----TEEEETTEEEEECTTCEECCEE-SSCEEE
T ss_pred EEEEECCC----------CCcccccCCCCEEEEEEEeEEE----EC-----CeEECCCeEEEeCCCCccccEe-CCCCEE
Confidence 46677765 3578999999999999999854 23 3578899999999999999887 444444
Q ss_pred EEEE
Q 029842 146 LMRL 149 (187)
Q Consensus 146 ~ir~ 149 (187)
.+.+
T Consensus 106 ~vk~ 109 (223)
T 3o14_A 106 FVKL 109 (223)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 4444
No 117
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=96.98 E-value=0.0009 Score=52.46 Aligned_cols=62 Identities=15% Similarity=0.133 Sum_probs=48.3
Q ss_pred eeeeeeeCcccccCHHHHhcCcccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeee
Q 029842 64 YMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTL 138 (187)
Q Consensus 64 ~~dvv~v~~~~~p~~~~~~~~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~ 138 (187)
..-++...+. ..+..|+|+..|.+|+|+|+-.+.-++..+ .-...+|+++.-|+|..|....
T Consensus 47 ~t~lvr~~pG----------~~~p~H~H~g~ee~~VL~G~~~~~~Gd~~~---~~~~~aGsYv~ePpGs~H~p~~ 108 (153)
T 3bal_A 47 WTAIFNCPAG----------SSFASHIHAGPGEYFLTKGKMEVRGGEQEG---GSTAYAPSYGFESSGALHGKTF 108 (153)
T ss_dssp EEEEEEECTT----------EEECCEEESSCEEEEEEESEEEETTCGGGT---SEEEESSEEEEECTTCEESCCE
T ss_pred EEEEEEeCCC----------CCccCccCCCCEEEEEEEEEEEecCccccC---ccccCCCeEEEcCCCCccccee
Confidence 4566677764 458999999999999999999887654322 2456899999999999998544
No 118
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=96.94 E-value=0.0019 Score=53.93 Aligned_cols=46 Identities=20% Similarity=0.338 Sum_probs=38.9
Q ss_pred cCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCC
Q 029842 91 HADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT 140 (187)
Q Consensus 91 H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~ 140 (187)
|+.+|+.|||+|++.+...+.. .+.+++||.++||+|..=.+...+
T Consensus 184 ~~~~E~~~ILeG~v~lt~~~G~----~~~~~aGD~~~~P~G~~~tWev~e 229 (238)
T 3myx_A 184 HKIHELMNLIEGRVVLSLENGS----SLTVNTGDTVFVAQGAPCKWTSTG 229 (238)
T ss_dssp CSSCEEEEEEECCEEEEETTSC----EEEECTTCEEEECTTCEEEEEESS
T ss_pred CCCCEEEEEEEeEEEEEeCCCC----EEEECCCCEEEECCCCEEEEEECc
Confidence 4678999999999999985432 799999999999999988777664
No 119
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=96.77 E-value=0.0066 Score=46.76 Aligned_cols=68 Identities=18% Similarity=0.219 Sum_probs=49.1
Q ss_pred CcccccccC-cceEEEEeeceEEEEEecCCCcEEEEEEeCCCE-EEeCCCCeeeeeeCCCCcEEEEEEEcCCC
Q 029842 84 NFYTEHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDL-IVLPAGIYHRFTLDTSNYVKLMRLFVGEP 154 (187)
Q Consensus 84 ~~~~eH~H~-~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDl-IiIP~g~~H~f~~~~~~~~~~ir~f~~~~ 154 (187)
....+|.|. ..|+++|++|++.+.+.+... .-++.+...+. |.||||+.|.+..-+.+ ..+-.+++.+
T Consensus 46 ~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg~~-~~~~~L~~~~~gL~IppgvWh~~~~~s~~--avllvlas~~ 115 (141)
T 2pa7_A 46 EPRGFHAHKKLEQVLVCLNGSCRVILDDGNI-IQEITLDSPAVGLYVGPAVWHEMHDFSSD--CVMMVLASDY 115 (141)
T ss_dssp CCEEEEEESSCCEEEEEEESCEEEEEECSSC-EEEEEECCTTEEEEECTTCEEEEECCCTT--CEEEEEESSC
T ss_pred CEECcCcCCCceEEEEEEccEEEEEEECCcE-EEEEEECCCCcEEEeCCCEEEEEEEcCCC--eEEEEECCCC
Confidence 446789996 789999999999999975322 33555655555 99999999999876654 3333455544
No 120
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=96.57 E-value=0.006 Score=52.17 Aligned_cols=46 Identities=17% Similarity=0.251 Sum_probs=42.2
Q ss_pred ceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcE
Q 029842 94 EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYV 144 (187)
Q Consensus 94 ~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~ 144 (187)
+-.+++|+|+....++++ .+.+++||.|.||||+.|.+...++..+
T Consensus 227 d~wiWqLEGss~Vt~~~q-----~~~L~~~DsLLIpa~~~y~~~r~~gsv~ 272 (286)
T 2qnk_A 227 DVWLWQLEGSSVVTMGGR-----RLSLAPDDSLLVLAGTSYAWERTQGSVA 272 (286)
T ss_dssp CEEEEEEESCEEEEETTE-----EEEECTTEEEEECTTCCEEEEECTTCEE
T ss_pred cEEEEEEcCceEEEECCe-----EEeccCCCEEEecCCCeEEEEecCCeEE
Confidence 788999999999999998 9999999999999999999998887543
No 121
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=96.29 E-value=0.037 Score=43.96 Aligned_cols=61 Identities=10% Similarity=0.088 Sum_probs=49.9
Q ss_pred cCcccccccC-cceEEEEeeceEEEEEecC-C-----CcEEEEEEe---CCCEEEeCCCCeeeeeeCCCCc
Q 029842 83 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDE-S-----DQWIRIWIK---AGDLIVLPAGIYHRFTLDTSNY 143 (187)
Q Consensus 83 ~~~~~eH~H~-~~Ei~yileG~g~f~i~~~-~-----d~~~~~~v~---~GDlIiIP~g~~H~f~~~~~~~ 143 (187)
+..-..|.|. ..++..|+.|++...+.|. . ++|..+.+. .+-.|.||+|..|.|.+-++..
T Consensus 63 GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~ 133 (174)
T 3ejk_A 63 RRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTP 133 (174)
T ss_dssp TCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSC
T ss_pred CCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCC
Confidence 4557788885 7899999999999988653 2 569999998 5678999999999999876633
No 122
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=96.27 E-value=0.015 Score=46.73 Aligned_cols=60 Identities=17% Similarity=0.374 Sum_probs=46.8
Q ss_pred cCccccccc---CcceEEEEeeceEE---EEEecCC---CcEEEEEEeC--CCEEEeCCCCeeeeeeCCCC
Q 029842 83 KNFYTEHIH---ADEEIRYCLEGSGY---FDVRDES---DQWIRIWIKA--GDLIVLPAGIYHRFTLDTSN 142 (187)
Q Consensus 83 ~~~~~eH~H---~~~Ei~yileG~g~---f~i~~~~---d~~~~~~v~~--GDlIiIP~g~~H~f~~~~~~ 142 (187)
+.....|.| ...++..|+.|+.. ++++... ++|..+.+.+ +..|.||+|..|.|.+-++.
T Consensus 58 GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (185)
T 1ep0_A 58 GVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE 128 (185)
T ss_dssp TBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred CeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 445677887 68899999999975 4444211 4799999987 57899999999999987764
No 123
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=96.21 E-value=0.018 Score=46.98 Aligned_cols=60 Identities=20% Similarity=0.375 Sum_probs=47.4
Q ss_pred cCcccccccC----cceEEEEeeceE---EEEEecCC---CcEEEEEEeC--CCEEEeCCCCeeeeeeCCCC
Q 029842 83 KNFYTEHIHA----DEEIRYCLEGSG---YFDVRDES---DQWIRIWIKA--GDLIVLPAGIYHRFTLDTSN 142 (187)
Q Consensus 83 ~~~~~eH~H~----~~Ei~yileG~g---~f~i~~~~---d~~~~~~v~~--GDlIiIP~g~~H~f~~~~~~ 142 (187)
+.....|.|. ..++..|++|+. .++++... ++|..+.+.+ +-.|.||+|..|.|.+-+++
T Consensus 80 GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~ 151 (205)
T 3ryk_A 80 GTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPH 151 (205)
T ss_dssp TBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSS
T ss_pred CcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCC
Confidence 3456778774 789999999997 55555322 5799999986 78899999999999987654
No 124
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=96.12 E-value=0.02 Score=46.41 Aligned_cols=60 Identities=15% Similarity=0.092 Sum_probs=48.8
Q ss_pred cCcccccccCcceEEEEee-ceEEEEEecCC-----CcEEEEEEeCCCEEEeCCCCeeeeeeCCCC
Q 029842 83 KNFYTEHIHADEEIRYCLE-GSGYFDVRDES-----DQWIRIWIKAGDLIVLPAGIYHRFTLDTSN 142 (187)
Q Consensus 83 ~~~~~eH~H~~~Ei~yile-G~g~f~i~~~~-----d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~ 142 (187)
+.....|.|....+..|+. |+..-.+-|.. ++|..+.+.++..|.||+|..|.|.+-+++
T Consensus 70 GvlRGlH~h~q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~ 135 (197)
T 1nxm_A 70 NVLRGLHAEPWDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF 135 (197)
T ss_dssp TBEEEEEECSSCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE
T ss_pred CCcceeeecccceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC
Confidence 4567789999999999999 99543333333 679999999999999999999999987654
No 125
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=96.11 E-value=0.044 Score=43.30 Aligned_cols=71 Identities=15% Similarity=0.220 Sum_probs=55.8
Q ss_pred CcccccccCc-ceEEEEeeceEEEEEecCCCc----EEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCC
Q 029842 84 NFYTEHIHAD-EEIRYCLEGSGYFDVRDESDQ----WIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEP 154 (187)
Q Consensus 84 ~~~~eH~H~~-~Ei~yileG~g~f~i~~~~d~----~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~~ 154 (187)
+....|-|.. ..+++||+|+....+-..++. .-...+.+||..+.|++-.|++.+..+.+...|-+|+.+-
T Consensus 80 q~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~aVSlHvY~pp~ 155 (171)
T 3eqe_A 80 KETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMVSLHVYSPPL 155 (171)
T ss_dssp CBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCEEEEEEEESCC
T ss_pred CCcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCCCCCEEEEEEeCCCc
Confidence 4567899984 788999999999765321111 1257789999999999999999987778889999998763
No 126
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=96.10 E-value=0.021 Score=45.78 Aligned_cols=60 Identities=23% Similarity=0.362 Sum_probs=46.7
Q ss_pred cCccccccc---CcceEEEEeeceEE---EEEecCC---CcEEEEEEeC--CCEEEeCCCCeeeeeeCCCC
Q 029842 83 KNFYTEHIH---ADEEIRYCLEGSGY---FDVRDES---DQWIRIWIKA--GDLIVLPAGIYHRFTLDTSN 142 (187)
Q Consensus 83 ~~~~~eH~H---~~~Ei~yileG~g~---f~i~~~~---d~~~~~~v~~--GDlIiIP~g~~H~f~~~~~~ 142 (187)
+.....|.| ....+..|+.|+.. ++++... ++|..+.+.+ +..|.||+|..|.|.+-++.
T Consensus 59 GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 129 (184)
T 2ixk_A 59 GVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY 129 (184)
T ss_dssp TBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred CceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC
Confidence 445677887 57899999999975 4444211 4799999987 47899999999999987764
No 127
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=95.91 E-value=0.016 Score=52.73 Aligned_cols=57 Identities=5% Similarity=0.091 Sum_probs=47.1
Q ss_pred cCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 029842 91 HADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 152 (187)
Q Consensus 91 H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~ 152 (187)
.+.|+++++-+|++.+.-.=. .+.+++||+++||.|+.++....+..+..++-.|..
T Consensus 176 aDGD~Livpq~G~l~i~TEfG-----~L~v~pgei~VIPRGi~frv~l~~p~Rgyi~E~~g~ 232 (471)
T 1eyb_A 176 SDGDFLIVPQKGNLLIYTEFG-----KMLVQPNEICVIQRGMRFSIDVFEETRGYILEVYGV 232 (471)
T ss_dssp SSEEEEEEEEESCEEEEETTE-----EEEECTTEEEEECTTCCEEEECSSSEEEEEEEEESC
T ss_pred CCCCEEEEEEeCCEEEEEecc-----cEEeccCCEEEECCccEEEEeeCCCceEEEEEccCC
Confidence 467999999999999988755 899999999999999999999866445555555554
No 128
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=95.84 E-value=0.03 Score=44.79 Aligned_cols=60 Identities=20% Similarity=0.370 Sum_probs=45.8
Q ss_pred cCccccccc----CcceEEEEeeceEE-EEEecCC-----CcEEEEEEeC--CCEEEeCCCCeeeeeeCCCC
Q 029842 83 KNFYTEHIH----ADEEIRYCLEGSGY-FDVRDES-----DQWIRIWIKA--GDLIVLPAGIYHRFTLDTSN 142 (187)
Q Consensus 83 ~~~~~eH~H----~~~Ei~yileG~g~-f~i~~~~-----d~~~~~~v~~--GDlIiIP~g~~H~f~~~~~~ 142 (187)
+.....|.| ....+.+|+.|+.. ..++... ++|..+.+.+ +..|.||+|..|.|.+-++.
T Consensus 57 GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (183)
T 1dzr_A 57 NVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY 128 (183)
T ss_dssp TBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred CeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 445677877 56899999999975 3333222 4699999987 47899999999999987764
No 129
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=95.77 E-value=0.048 Score=44.25 Aligned_cols=72 Identities=14% Similarity=0.085 Sum_probs=56.4
Q ss_pred cCcccccccCcceEEEEeeceEEEEEec--CCCcEE----EEEEeCCCEEEeCC--CCeeeeeeC-CCCcEEEEEEEcCC
Q 029842 83 KNFYTEHIHADEEIRYCLEGSGYFDVRD--ESDQWI----RIWIKAGDLIVLPA--GIYHRFTLD-TSNYVKLMRLFVGE 153 (187)
Q Consensus 83 ~~~~~eH~H~~~Ei~yileG~g~f~i~~--~~d~~~----~~~v~~GDlIiIP~--g~~H~f~~~-~~~~~~~ir~f~~~ 153 (187)
++....|-|....+++||+|+..-.+-. .++..+ +..+.+|+.+.+++ |-.|+..+. ++.+...|.+|...
T Consensus 89 Gq~spiHdH~~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~~~avsLHvY~~~ 168 (208)
T 2gm6_A 89 GQRTPIHDHTVWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDDRVSISIHVYGAN 168 (208)
T ss_dssp TCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSSCEEEEEEESSC
T ss_pred CcccCcccCCcceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCCCcEEEEEEEcCC
Confidence 4668899998899999999999765522 122222 57899999999999 999999965 56788999999875
Q ss_pred C
Q 029842 154 P 154 (187)
Q Consensus 154 ~ 154 (187)
-
T Consensus 169 ~ 169 (208)
T 2gm6_A 169 I 169 (208)
T ss_dssp G
T ss_pred C
Confidence 3
No 130
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=95.67 E-value=0.051 Score=45.56 Aligned_cols=66 Identities=12% Similarity=0.207 Sum_probs=51.5
Q ss_pred CcccccccCcc-eEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCC--CCeeeeeeC-CCCcEEEEEEEcCC
Q 029842 84 NFYTEHIHADE-EIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPA--GIYHRFTLD-TSNYVKLMRLFVGE 153 (187)
Q Consensus 84 ~~~~eH~H~~~-Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~--g~~H~f~~~-~~~~~~~ir~f~~~ 153 (187)
.-+..|-|... .|.|+++|+....-.-.+ .-.+++||+-...| |+.|.-.+. ++..+..++++...
T Consensus 75 ~gf~~HPHrg~EtvTyvl~G~~~H~DS~Gn----~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQlWi~l 144 (256)
T 2vec_A 75 AAFQPRTYPKVDILNVILDGEAEYRDSEGN----HVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLDA 144 (256)
T ss_dssp CEEEEECCSSEEEEEEEEESEEEEEETTSC----EEEEETTEEEEECCCTTCCEEEEECCSSSCEEEEEEEEEC
T ss_pred CccCCcCCCCcEEEEEEEeeEEEEEeCCCC----EEEECCCeEEEEECCCCeEEEEEECCCCceEEEEEEEEeC
Confidence 34689999855 589999999988765222 78899999999966 589997764 45789999998663
No 131
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=95.61 E-value=0.05 Score=43.20 Aligned_cols=73 Identities=14% Similarity=0.208 Sum_probs=53.5
Q ss_pred CcccccccCcceEEEEeeceE-EEEEecCCCcEEEEE----EeCCCE--EEeCCCCeeeeeeCCCCcEEEEEEEcCCCce
Q 029842 84 NFYTEHIHADEEIRYCLEGSG-YFDVRDESDQWIRIW----IKAGDL--IVLPAGIYHRFTLDTSNYVKLMRLFVGEPVW 156 (187)
Q Consensus 84 ~~~~eH~H~~~Ei~yileG~g-~f~i~~~~d~~~~~~----v~~GDl--IiIP~g~~H~f~~~~~~~~~~ir~f~~~~gw 156 (187)
.+...|....+|+.|+..|.+ .+.+-+.++...++. +.+|+. ++||+|+.+.....++.+ ++--..=.|||
T Consensus 60 ~~S~~HRv~sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~Ge~pQ~vVP~G~wqaa~~~~g~~--~LV~C~VaPGF 137 (170)
T 1yud_A 60 EVSHFHRLTADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAGERPQFLVPKGCIFGSAMNQDGF--SLVGCMVSPGF 137 (170)
T ss_dssp CCEEEEECSSCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTTEESCEEECTTCEEEEEESSSSE--EEEEEEESSCC
T ss_pred CCCeeEEcCCCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccCceeEEEECCCCEEEEEECCCCc--EEEEEEECCCc
Confidence 456778888999999999997 776755566655555 467888 999999999988764332 44445556777
Q ss_pred EE
Q 029842 157 TA 158 (187)
Q Consensus 157 ~~ 158 (187)
.-
T Consensus 138 ~f 139 (170)
T 1yud_A 138 TF 139 (170)
T ss_dssp CG
T ss_pred cC
Confidence 64
No 132
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=95.52 E-value=0.14 Score=38.76 Aligned_cols=72 Identities=17% Similarity=0.200 Sum_probs=53.8
Q ss_pred cCccccc----ccC-cceEEEEeeceEEEEEecCCCc---EEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCC
Q 029842 83 KNFYTEH----IHA-DEEIRYCLEGSGYFDVRDESDQ---WIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEP 154 (187)
Q Consensus 83 ~~~~~eH----~H~-~~Ei~yileG~g~f~i~~~~d~---~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~~ 154 (187)
+.+...| +|. ..+.+-|++|+..|..-+.++. --.+...+|+..+|||+..|+...-+++-..-|.||..++
T Consensus 24 ~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsdd~~f~leFyc~~~ 103 (127)
T 3bb6_A 24 AGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFFVAPE 103 (127)
T ss_dssp GGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESSTTCEEEEEEEECHH
T ss_pred HHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCCCEEEEEEEEeCCc
Confidence 5677888 576 5799999999999985333332 2357788999999999999999975554444488887654
No 133
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=95.20 E-value=0.086 Score=42.66 Aligned_cols=60 Identities=13% Similarity=0.195 Sum_probs=46.6
Q ss_pred cCcccccccC----cceEEEEeeceEEE-EEecCC-----CcEEEEEEeC--CCEEEeCCCCeeeeeeCCCC
Q 029842 83 KNFYTEHIHA----DEEIRYCLEGSGYF-DVRDES-----DQWIRIWIKA--GDLIVLPAGIYHRFTLDTSN 142 (187)
Q Consensus 83 ~~~~~eH~H~----~~Ei~yileG~g~f-~i~~~~-----d~~~~~~v~~--GDlIiIP~g~~H~f~~~~~~ 142 (187)
+.....|.|. ...+..|+.|+... .++... ++|..+.+.+ +..|.||+|..|.|.+-+++
T Consensus 75 GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~ 146 (196)
T 1wlt_A 75 GVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDS 146 (196)
T ss_dssp TBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSE
T ss_pred CcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 4556778885 68999999999944 333332 4699999996 68899999999999987763
No 134
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=95.08 E-value=0.092 Score=43.13 Aligned_cols=60 Identities=18% Similarity=0.273 Sum_probs=46.3
Q ss_pred cCcccccccC----cceEEEEeeceEE---EEEecC---CCcEEEEEEeCC--CEEEeCCCCeeeeeeCCCC
Q 029842 83 KNFYTEHIHA----DEEIRYCLEGSGY---FDVRDE---SDQWIRIWIKAG--DLIVLPAGIYHRFTLDTSN 142 (187)
Q Consensus 83 ~~~~~eH~H~----~~Ei~yileG~g~---f~i~~~---~d~~~~~~v~~G--DlIiIP~g~~H~f~~~~~~ 142 (187)
+.....|.|. ...+..|+.|+.. ++++.. -++|..+.+.+. ..|.||+|..|.|.+-+++
T Consensus 65 GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~ 136 (216)
T 2c0z_A 65 GVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDE 136 (216)
T ss_dssp TBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred CcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCC
Confidence 4456778875 6899999999975 444321 246999999985 6899999999999987765
No 135
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=94.75 E-value=0.16 Score=42.15 Aligned_cols=64 Identities=23% Similarity=0.369 Sum_probs=50.2
Q ss_pred cccccccCc-ceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCC--CCeeeeee-CCCCcEEEEEEEcC
Q 029842 85 FYTEHIHAD-EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPA--GIYHRFTL-DTSNYVKLMRLFVG 152 (187)
Q Consensus 85 ~~~eH~H~~-~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~--g~~H~f~~-~~~~~~~~ir~f~~ 152 (187)
-+..|-|.. +.|.|+++|+....-.-.+ .-.+++||+-..-| |+.|.-.+ .++..+..++++..
T Consensus 53 gf~~HPHrg~EtvTyvl~G~~~H~DS~Gn----~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQlWv~ 120 (242)
T 1tq5_A 53 GFGTHPHKDMEILTYVLEGTVEHQDSMGN----KEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQIWIM 120 (242)
T ss_dssp EEEEEEECSCEEEEEEEESEEEEEESSSC----EEEEETTCEEEEECTTCEEEEEECCCSSCCEEEEEEEEC
T ss_pred cCCCcCCCCcEEEEEEEEeEEEEEeCCCC----cEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEEEEc
Confidence 468999975 5599999999888765222 78899999999955 59999765 44578999999864
No 136
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=94.70 E-value=0.16 Score=41.31 Aligned_cols=60 Identities=18% Similarity=0.344 Sum_probs=45.8
Q ss_pred cCcccccccC----cceEEEEeeceEE-EEEecCC-----CcEEEEEEeCC--CEEEeCCCCeeeeeeCCCC
Q 029842 83 KNFYTEHIHA----DEEIRYCLEGSGY-FDVRDES-----DQWIRIWIKAG--DLIVLPAGIYHRFTLDTSN 142 (187)
Q Consensus 83 ~~~~~eH~H~----~~Ei~yileG~g~-f~i~~~~-----d~~~~~~v~~G--DlIiIP~g~~H~f~~~~~~ 142 (187)
+..-..|.|. ...+..|+.|+.. ..++... ++|..+.+.+. ..|.||+|..|.|.+-+++
T Consensus 57 GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (205)
T 1oi6_A 57 GVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDD 128 (205)
T ss_dssp TBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTT
T ss_pred CeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCC
Confidence 4456778874 6899999999975 2333222 46999999874 7899999999999987765
No 137
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=94.42 E-value=0.041 Score=45.10 Aligned_cols=50 Identities=16% Similarity=0.095 Sum_probs=39.5
Q ss_pred CcccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCc
Q 029842 84 NFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNY 143 (187)
Q Consensus 84 ~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~ 143 (187)
..+..|.|...|+ |||+|+.. +. .-.+.+|+.|-+|+|..|...++++..
T Consensus 157 ~~~~~~~hgG~Ei-lVL~G~~~----d~-----~~~~~~GsWlR~P~gs~h~~~ag~~g~ 206 (223)
T 3o14_A 157 ANLTSEAAGGIEV-LVLDGDVT----VN-----DEVLGRNAWLRLPEGEALSATAGARGA 206 (223)
T ss_dssp CEEEECCSSCEEE-EEEEEEEE----ET-----TEEECTTEEEEECTTCCEEEEEEEEEE
T ss_pred CccCCCCCCcEEE-EEEEeEEE----EC-----CceECCCeEEEeCCCCccCcEECCCCe
Confidence 4578899988887 99999843 23 257889999999999999998855433
No 138
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=94.23 E-value=0.24 Score=40.89 Aligned_cols=60 Identities=18% Similarity=0.304 Sum_probs=45.9
Q ss_pred cCcccccccC----cceEEEEeeceEE-EEEecCC-----CcEEEEEEeCC--CEEEeCCCCeeeeeeCCCC
Q 029842 83 KNFYTEHIHA----DEEIRYCLEGSGY-FDVRDES-----DQWIRIWIKAG--DLIVLPAGIYHRFTLDTSN 142 (187)
Q Consensus 83 ~~~~~eH~H~----~~Ei~yileG~g~-f~i~~~~-----d~~~~~~v~~G--DlIiIP~g~~H~f~~~~~~ 142 (187)
+..-..|.|. ...+..|+.|+.. ..++... ++|..+.+.+. ..|.||+|..|.|.+-++.
T Consensus 76 GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~ 147 (225)
T 1upi_A 76 GVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDN 147 (225)
T ss_dssp TBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSS
T ss_pred CeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCC
Confidence 4456778875 6899999999975 3333222 46999999875 7899999999999987765
No 139
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=93.95 E-value=0.083 Score=44.19 Aligned_cols=59 Identities=22% Similarity=0.283 Sum_probs=42.5
Q ss_pred cCcccccccC-cceEEEEeec---eEEEEEecCC-------------CcE------EEEEEeCCCEEEeCCCCeeeeeeC
Q 029842 83 KNFYTEHIHA-DEEIRYCLEG---SGYFDVRDES-------------DQW------IRIWIKAGDLIVLPAGIYHRFTLD 139 (187)
Q Consensus 83 ~~~~~eH~H~-~~Ei~yileG---~g~f~i~~~~-------------d~~------~~~~v~~GDlIiIP~g~~H~f~~~ 139 (187)
++..+.|.|. -.|=+.+.-| ..++...+.+ +.. =.+.++||+-|.||||++|||.+.
T Consensus 116 gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl~Pg~~H~F~ae 195 (246)
T 3kmh_A 116 AQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICLPPGLYHSFWAE 195 (246)
T ss_dssp TCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEECTTEEEEEEEC
T ss_pred CCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEecCCCCEEEEEec
Confidence 3568899996 5777777777 4444444322 111 146889999999999999999998
Q ss_pred CC
Q 029842 140 TS 141 (187)
Q Consensus 140 ~~ 141 (187)
++
T Consensus 196 ~g 197 (246)
T 3kmh_A 196 AG 197 (246)
T ss_dssp TT
T ss_pred CC
Confidence 86
No 140
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=93.80 E-value=0.15 Score=40.06 Aligned_cols=52 Identities=12% Similarity=0.323 Sum_probs=40.0
Q ss_pred cccCcceEEEEeeceEEEEEecCC----------------------------------CcEEEEEEeCCCEEEeCCCCee
Q 029842 89 HIHADEEIRYCLEGSGYFDVRDES----------------------------------DQWIRIWIKAGDLIVLPAGIYH 134 (187)
Q Consensus 89 H~H~~~Ei~yileG~g~f~i~~~~----------------------------------d~~~~~~v~~GDlIiIP~g~~H 134 (187)
|.-..+=+...+.|+-.+.+-... -..+.++++|||+|.||+|-.|
T Consensus 140 H~D~~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD~LyiP~gW~H 219 (235)
T 4gjz_A 140 HQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWH 219 (235)
T ss_dssp ECCSSEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEECTTCEEEECTTCEE
T ss_pred eeccccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEECCCCEEEeCCCCcE
Confidence 443456677778999999884211 1357899999999999999999
Q ss_pred eeeeCC
Q 029842 135 RFTLDT 140 (187)
Q Consensus 135 ~f~~~~ 140 (187)
...+.+
T Consensus 220 ~V~~l~ 225 (235)
T 4gjz_A 220 YVRALD 225 (235)
T ss_dssp EEEESS
T ss_pred EEEECC
Confidence 998765
No 141
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=93.49 E-value=0.078 Score=45.55 Aligned_cols=24 Identities=38% Similarity=0.642 Sum_probs=21.1
Q ss_pred EEEEeCCCEEEeCCCCeeeeeeCC
Q 029842 117 RIWIKAGDLIVLPAGIYHRFTLDT 140 (187)
Q Consensus 117 ~~~v~~GDlIiIP~g~~H~f~~~~ 140 (187)
.+.++|||.+.||||+.|.+..+.
T Consensus 159 ~v~l~pGd~~~ipaGt~HA~~~G~ 182 (319)
T 1qwr_A 159 RIKIKPGDFYYVPSGTLHALCKGA 182 (319)
T ss_dssp EEECCTTCEEEECTTCCEEECSSE
T ss_pred EEEcCCCCEEEcCCCCceEecCCC
Confidence 799999999999999999976433
No 142
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=93.45 E-value=0.15 Score=43.19 Aligned_cols=71 Identities=18% Similarity=0.302 Sum_probs=45.7
Q ss_pred ccccccCcc---------eEEEE-ee---ceEEEEEec---CCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEE
Q 029842 86 YTEHIHADE---------EIRYC-LE---GSGYFDVRD---ESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 86 ~~eH~H~~~---------Ei~yi-le---G~g~f~i~~---~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~ 149 (187)
++.|+|+.+ |++|+ +. |.|.-.+-. ..|+ .+.|+-||.|+||.|- |-..+.+......|-+
T Consensus 168 yPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~~~de--~~~V~~~d~VlvP~Gy-Hp~~a~pGy~~Yylwv 244 (270)
T 2qjv_A 168 WPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSLDE--CMAVYNRDVVXVPXGY-HPVATIAGYDNYYLNV 244 (270)
T ss_dssp CSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTSSSEE--EEEEETTCEEEESSSB-CCEEECTTCEEEEEEE
T ss_pred CCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCCCCce--EEEEECCCEEecCCCc-CCCcCCCCcccEEEEE
Confidence 689999964 99988 43 566666611 1222 6999999999999999 9866554433333433
Q ss_pred EcC-CCceEEe
Q 029842 150 FVG-EPVWTAY 159 (187)
Q Consensus 150 f~~-~~gw~~~ 159 (187)
-.+ ...|...
T Consensus 245 MaG~~r~~~~~ 255 (270)
T 2qjv_A 245 MAGPLRXWRFT 255 (270)
T ss_dssp EECSSCCCCCE
T ss_pred EECCCcccccc
Confidence 333 2345443
No 143
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=92.82 E-value=0.35 Score=40.77 Aligned_cols=64 Identities=20% Similarity=0.317 Sum_probs=50.7
Q ss_pred cccccccCc-ceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCC--CCeeeeeeCCCCcEEEEEEEcC
Q 029842 85 FYTEHIHAD-EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPA--GIYHRFTLDTSNYVKLMRLFVG 152 (187)
Q Consensus 85 ~~~eH~H~~-~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~--g~~H~f~~~~~~~~~~ir~f~~ 152 (187)
-+..|-|.. +-|-|+++|+....-.-.+ .-.+++||+-..-| |+.|.-...++..+..++++..
T Consensus 51 gf~~HPHrg~EtVTyvl~G~~~H~DS~Gn----~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlWvn 117 (277)
T 2p17_A 51 TFDVHPHRGIETVTYVISGELEHFDSKAG----HSTLGPGDVQWMTAGRGVVHKEDPASGSTVHSLQLWVN 117 (277)
T ss_dssp CCCCEEECSEEEEEEEEESCEEEEETTTE----EEEECTTCEEEEECTTCEEEEEEECTTCCEEEEEEEEE
T ss_pred CCCCCCCCCcEEEEEEEEeEEEEeeCCCC----ceEECCCeEEEEeCCCCEEEEeecCCCCCEEEEEEEee
Confidence 478999985 5599999999877644222 67899999988877 5889887777778999999874
No 144
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=92.53 E-value=1.4 Score=35.39 Aligned_cols=72 Identities=11% Similarity=-0.033 Sum_probs=55.9
Q ss_pred cCcccccccC-cceEEEEeeceEEEEEecCC-C------cEEEEEEeCCCEEEe-CCCCeeeeeeCC-CCcEEEEEEEcC
Q 029842 83 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDES-D------QWIRIWIKAGDLIVL-PAGIYHRFTLDT-SNYVKLMRLFVG 152 (187)
Q Consensus 83 ~~~~~eH~H~-~~Ei~yileG~g~f~i~~~~-d------~~~~~~v~~GDlIiI-P~g~~H~f~~~~-~~~~~~ir~f~~ 152 (187)
++...-|-|. ...+++||+|+..-..-+.. + ..-...+.+||...+ |++-.|+..+.. +.+...|.+|..
T Consensus 80 Gq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~~~avSlHvY~p 159 (200)
T 3eln_A 80 GHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHTEPAVSLHLYSP 159 (200)
T ss_dssp TCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSSCCEEEEEEEES
T ss_pred CCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCCCCEEEEEeCCC
Confidence 3567899998 68999999999987753211 1 122578999999999 777899999765 678899999987
Q ss_pred CC
Q 029842 153 EP 154 (187)
Q Consensus 153 ~~ 154 (187)
+-
T Consensus 160 p~ 161 (200)
T 3eln_A 160 PF 161 (200)
T ss_dssp CC
T ss_pred Cc
Confidence 73
No 145
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=92.46 E-value=0.7 Score=39.87 Aligned_cols=68 Identities=10% Similarity=0.100 Sum_probs=50.0
Q ss_pred ccccccCcceEEEEeeceEEEEEecC-------------------------CC----------cEEEEEEeCCCEEEeCC
Q 029842 86 YTEHIHADEEIRYCLEGSGYFDVRDE-------------------------SD----------QWIRIWIKAGDLIVLPA 130 (187)
Q Consensus 86 ~~eH~H~~~Ei~yileG~g~f~i~~~-------------------------~d----------~~~~~~v~~GDlIiIP~ 130 (187)
...|.-..+=+...+.|+=.+.+-.. .| ..+.+.++|||+|.||+
T Consensus 196 t~~H~D~~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD~LyiP~ 275 (349)
T 3d8c_A 196 TPAHYGEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPM 275 (349)
T ss_dssp EEEECCSEEEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEECTTCEEEECT
T ss_pred ccceECChhcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEECCCCEEEECC
Confidence 34566556667777899888886321 11 57899999999999999
Q ss_pred CCeeeeeeCC-CCcEEEEEEEcCC
Q 029842 131 GIYHRFTLDT-SNYVKLMRLFVGE 153 (187)
Q Consensus 131 g~~H~f~~~~-~~~~~~ir~f~~~ 153 (187)
|-.|...+.+ +..-.++.++...
T Consensus 276 gWwH~V~~l~d~~~sisvn~w~~~ 299 (349)
T 3d8c_A 276 YWWHHIESLLNGGITITVNFWYKG 299 (349)
T ss_dssp TCEEEEEECTTSCCEEEEEEEEEC
T ss_pred CCcEEEEEcCCCCcEEEEEEEcCC
Confidence 9999998876 4556677775543
No 146
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=92.36 E-value=0.6 Score=41.93 Aligned_cols=55 Identities=22% Similarity=0.318 Sum_probs=43.6
Q ss_pred ccccccCcceEEEEeeceEEEEEecCC----------------CcEEEEEEeCCCEEEeCCCCeeeeeeCC
Q 029842 86 YTEHIHADEEIRYCLEGSGYFDVRDES----------------DQWIRIWIKAGDLIVLPAGIYHRFTLDT 140 (187)
Q Consensus 86 ~~eH~H~~~Ei~yileG~g~f~i~~~~----------------d~~~~~~v~~GDlIiIP~g~~H~f~~~~ 140 (187)
+..|+-..+=+...+.|+=.+.+-... ...+.+.++|||++.||+|..|...+.+
T Consensus 153 ~~~H~D~~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s~~ 223 (442)
T 2xdv_A 153 LPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADTPA 223 (442)
T ss_dssp SCSEECSSEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEECCS
T ss_pred ccceECCcceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEecC
Confidence 357776677778888999999986442 1246889999999999999999998765
No 147
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=92.28 E-value=0.64 Score=42.44 Aligned_cols=64 Identities=20% Similarity=0.320 Sum_probs=47.8
Q ss_pred ccccccCcceEEEEeeceEEEEEecCCC--------------------cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEE
Q 029842 86 YTEHIHADEEIRYCLEGSGYFDVRDESD--------------------QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVK 145 (187)
Q Consensus 86 ~~eH~H~~~Ei~yileG~g~f~i~~~~d--------------------~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~ 145 (187)
+..|.=+.+=+..-+.|+=.+.+....+ ..+.+.++|||++.||+|..|...+.++..-.
T Consensus 178 ~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~H~~~s~~~~~Sl 257 (489)
T 4diq_A 178 FAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIHQAECQDGVHSL 257 (489)
T ss_dssp SCCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCEEEEEBCSSCCEE
T ss_pred ccCccCCcceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCceEEEecCCCceE
Confidence 3456666777777789999999865322 24689999999999999999999987654444
Q ss_pred EEEE
Q 029842 146 LMRL 149 (187)
Q Consensus 146 ~ir~ 149 (187)
.+.+
T Consensus 258 hlTi 261 (489)
T 4diq_A 258 HLTL 261 (489)
T ss_dssp EEEE
T ss_pred EEee
Confidence 4444
No 148
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=92.25 E-value=1.3 Score=35.90 Aligned_cols=60 Identities=20% Similarity=0.279 Sum_probs=46.0
Q ss_pred cCccccccc----CcceEEEEeeceEEEEEecC------CCcEEEEEEeC--CCEEEeCCCCeeeeeeCCCC
Q 029842 83 KNFYTEHIH----ADEEIRYCLEGSGYFDVRDE------SDQWIRIWIKA--GDLIVLPAGIYHRFTLDTSN 142 (187)
Q Consensus 83 ~~~~~eH~H----~~~Ei~yileG~g~f~i~~~------~d~~~~~~v~~--GDlIiIP~g~~H~f~~~~~~ 142 (187)
+..-..|.| ....+.+|+.|+..-.+-|. =++|..+.+.+ +-.|.||+|..|.|.+-++.
T Consensus 54 GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~ 125 (201)
T 4hn1_A 54 GALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDD 125 (201)
T ss_dssp TBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTT
T ss_pred CceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCC
Confidence 455667777 47899999999974443331 25799999987 78899999999999987654
No 149
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=91.55 E-value=0.76 Score=39.60 Aligned_cols=56 Identities=18% Similarity=0.402 Sum_probs=43.8
Q ss_pred cccccccCcceEEEEeeceEEEEEe-cCC---------------------------------CcEEEEEEeCCCEEEeCC
Q 029842 85 FYTEHIHADEEIRYCLEGSGYFDVR-DES---------------------------------DQWIRIWIKAGDLIVLPA 130 (187)
Q Consensus 85 ~~~eH~H~~~Ei~yileG~g~f~i~-~~~---------------------------------d~~~~~~v~~GDlIiIP~ 130 (187)
-...|.-..+=+...+.|+=.+.+- ..+ ...+.+.++|||+|.||+
T Consensus 153 ~~~~H~D~~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~pGD~LyiP~ 232 (342)
T 1vrb_A 153 GFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPR 232 (342)
T ss_dssp CCCSEECSSEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEECTTCEEEECT
T ss_pred CCCCeECChhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEECCCcEEEeCC
Confidence 3556776667777788999999887 311 124788999999999999
Q ss_pred CCeeeeeeCC
Q 029842 131 GIYHRFTLDT 140 (187)
Q Consensus 131 g~~H~f~~~~ 140 (187)
|..|...+.+
T Consensus 233 gwwH~v~s~~ 242 (342)
T 1vrb_A 233 GLWHSTKSDQ 242 (342)
T ss_dssp TCEEEEECSS
T ss_pred CccEEEEECC
Confidence 9999999874
No 150
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=90.86 E-value=0.76 Score=39.32 Aligned_cols=37 Identities=32% Similarity=0.437 Sum_probs=31.7
Q ss_pred CcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCe
Q 029842 92 ADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIY 133 (187)
Q Consensus 92 ~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~ 133 (187)
....+..|++|+|.+..++. .+.+++||.++||++..
T Consensus 268 ~~~~il~v~~G~~~l~~~~~-----~~~l~~G~~~~vpa~~~ 304 (319)
T 1qwr_A 268 ESFLICSVIEGSGLLKYEDK-----TCPLKKGDHFILPAQMP 304 (319)
T ss_dssp SSCEEEEEEEEEEEEEETTE-----EEEEETTCEEEECTTCC
T ss_pred CccEEEEEEcCeEEEEECCE-----EEEEcCCcEEEEeCCCc
Confidence 46789999999999877544 68999999999999873
No 151
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=90.50 E-value=1.6 Score=32.63 Aligned_cols=61 Identities=18% Similarity=0.217 Sum_probs=44.2
Q ss_pred cceEEEEeeceEEEEEecCCCc---EEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCC
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQ---WIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEP 154 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~---~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~~ 154 (187)
....+-|++|+..|.+-+.++. --.+.+.+|+.-+|||...|+..++++-. .-|.||..++
T Consensus 38 tWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~sdD~~-f~leFyc~~~ 101 (119)
T 3dl3_A 38 VFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELSDDAQ-FNINFWSDQD 101 (119)
T ss_dssp EEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEECTTCE-EEEEEEECC-
T ss_pred EEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEECCCeE-EEEEEEECch
Confidence 4567889999999997332221 23568889999999999999999555433 3377877765
No 152
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=90.13 E-value=0.81 Score=38.81 Aligned_cols=63 Identities=25% Similarity=0.284 Sum_probs=50.0
Q ss_pred ccccccCcce-EEEEe-eceEEEEEecCCCcEEEEEEeCCCEEEeCC--CCeeeeeeCCCCcEEEEEEEcC
Q 029842 86 YTEHIHADEE-IRYCL-EGSGYFDVRDESDQWIRIWIKAGDLIVLPA--GIYHRFTLDTSNYVKLMRLFVG 152 (187)
Q Consensus 86 ~~eH~H~~~E-i~yil-eG~g~f~i~~~~d~~~~~~v~~GDlIiIP~--g~~H~f~~~~~~~~~~ir~f~~ 152 (187)
+..|-|...| |-|++ +|+....-.-.+ .-.+++||+-..-| |+.|.-...++..+..++++..
T Consensus 53 f~~HPHrg~EtVTyvl~~G~~~H~DS~Gn----~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlWvn 119 (290)
T 1j1l_A 53 FPDHPHRGFETVSYLLEGGSMAHEDFCGH----TGKMNPGDLQWMTAGRGILHAEMPCSEEPAHGLQLWVN 119 (290)
T ss_dssp EEEEEEBSEEEEEEECSSSCEEEEETTSC----EEEECTTCEEEEECTTCEEEEEEECSSSCEEEEEEEEE
T ss_pred CCCCCCCCeEEEEEECcceEEEEeeCCCC----ceEECCCcEEEEeCCCCEEEEeEcCCCCCEEEEEEEec
Confidence 7999998655 89999 999888754323 67899999988777 5889877666678999999874
No 153
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=89.95 E-value=0.22 Score=34.44 Aligned_cols=28 Identities=14% Similarity=0.210 Sum_probs=24.4
Q ss_pred CcccccccC-cceEEEEeeceEEEEEecC
Q 029842 84 NFYTEHIHA-DEEIRYCLEGSGYFDVRDE 111 (187)
Q Consensus 84 ~~~~eH~H~-~~Ei~yileG~g~f~i~~~ 111 (187)
..+..|+|+ ..||.||++|++++.+-+.
T Consensus 47 g~~~PH~hprA~ei~~V~~G~~~v~~V~~ 75 (79)
T 1dgw_X 47 ALFVPHYNSRATVILVANEGRAEVELVGL 75 (79)
T ss_dssp CEEEEEEESSCEEEEEEEESCEEEEEEEE
T ss_pred cCcCCccCCCCcEEEEEEeceEEEEEecC
Confidence 457899998 7899999999999998654
No 154
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=89.89 E-value=0.69 Score=39.64 Aligned_cols=66 Identities=14% Similarity=0.212 Sum_probs=46.5
Q ss_pred cccccCcceEEEEeeceEEEEEecCC------------------------------CcEEEEEEeCCCEEEeCCCCeeee
Q 029842 87 TEHIHADEEIRYCLEGSGYFDVRDES------------------------------DQWIRIWIKAGDLIVLPAGIYHRF 136 (187)
Q Consensus 87 ~eH~H~~~Ei~yileG~g~f~i~~~~------------------------------d~~~~~~v~~GDlIiIP~g~~H~f 136 (187)
..|.-..+=+...+.|+=.+.+-... -..+.+.++|||+|.||+|-.|..
T Consensus 181 ~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD~LyiP~gWwH~v 260 (338)
T 3al5_A 181 WTHYDVMDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDVLFIPALWFHNV 260 (338)
T ss_dssp EEECCSSEEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTCEEEECTTCEEEE
T ss_pred cceECCcccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCCEEEECCCCeEEE
Confidence 34554555566678898888764320 127899999999999999999999
Q ss_pred eeCCCCcEEEEE-EEcCCC
Q 029842 137 TLDTSNYVKLMR-LFVGEP 154 (187)
Q Consensus 137 ~~~~~~~~~~ir-~f~~~~ 154 (187)
.+.+ .-.++. .|...+
T Consensus 261 ~~l~--~sisvn~~~~~~~ 277 (338)
T 3al5_A 261 ISEE--FGVGVNIFWKHLP 277 (338)
T ss_dssp EESS--CEEEEEEEECSSC
T ss_pred eeCC--CEEEEEEEecCCc
Confidence 9874 235555 465544
No 155
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=89.42 E-value=1.1 Score=37.96 Aligned_cols=51 Identities=20% Similarity=0.282 Sum_probs=38.2
Q ss_pred Ccc-eEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCee-eeeeCCCCcEEEEEEEc
Q 029842 92 ADE-EIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYH-RFTLDTSNYVKLMRLFV 151 (187)
Q Consensus 92 ~~~-Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H-~f~~~~~~~~~~ir~f~ 151 (187)
... .+..|++| |....++. .+.+++||.++||++..- .+. + . .+++++.|.
T Consensus 246 ~~~~~il~v~~G-~~i~~~~~-----~~~l~~G~~~~ipa~~~~~~i~-g-~-~~~~~~a~~ 298 (300)
T 1zx5_A 246 GGVMNILYAAEG-YFILRGKE-----TADLHRGYSCLVPASTDSFTVE-S-E-RGKIVRIYL 298 (300)
T ss_dssp CSBCEEEEEEES-CEEEESSS-----EEEECTTCEEEECTTCCEEEEE-E-E-EEEEEEEEE
T ss_pred CCceEEEEEccc-EEEEeCCe-----EEEEccceEEEEeCCCceEEEE-e-C-ceEEEEEEE
Confidence 556 89999999 99887655 789999999999999843 332 2 1 467776654
No 156
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=88.93 E-value=0.21 Score=42.53 Aligned_cols=48 Identities=17% Similarity=0.169 Sum_probs=33.4
Q ss_pred cceEEEEee-ceEEEEEecC-----------CCc------EEEEEEeCCCEEEeCCCCeeeeeeCC
Q 029842 93 DEEIRYCLE-GSGYFDVRDE-----------SDQ------WIRIWIKAGDLIVLPAGIYHRFTLDT 140 (187)
Q Consensus 93 ~~Ei~yile-G~g~f~i~~~-----------~d~------~~~~~v~~GDlIiIP~g~~H~f~~~~ 140 (187)
-.|++|+|+ .++.+.++.. ++. -=.+.++|||.+.||||+.|.+..+.
T Consensus 117 KpE~~y~L~~~~~~~Gf~~~~~~~~~~~~l~~~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~~G~ 182 (300)
T 1zx5_A 117 VESAWLVFNKGKAYAGFKEDVKIEELEEKLKEEDFDFKTLLNTFETTPYDTFVIRPGIPHAGEGLR 182 (300)
T ss_dssp CCEEEEECSSCEEEEEESSCCCHHHHHHHHTSSSCCGGGGEEEEECCTTCEEEECTTCCEEEESEE
T ss_pred CcEEEEEcccHHHhhCCCCCCCHHHHHHHHHhCchhHHHHhceeECCCCCEEEcCCCCceEcCCCC
Confidence 468888887 3444443321 111 34788999999999999999986543
No 157
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=88.64 E-value=0.97 Score=39.90 Aligned_cols=54 Identities=19% Similarity=0.342 Sum_probs=38.9
Q ss_pred ccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEc
Q 029842 90 IHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFV 151 (187)
Q Consensus 90 ~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~ 151 (187)
.++...|..|++|+|.....+. .+.+++||.++||++..- ++... ..+++|.|.
T Consensus 339 ~~~~~~il~v~~G~~~l~~~~~-----~~~l~~G~~~fvpa~~~~-~~i~g--~~~~~~~~~ 392 (394)
T 2wfp_A 339 GQHSAAILFCVEGEAVLRKDEQ-----RLVLKPGESAFIGADESP-VNASG--TGRLARVYN 392 (394)
T ss_dssp CCSSCEEEEEEEEEEEEEETTE-----EEEECTTCEEEECGGGCC-EEEEE--EEEEEEEEC
T ss_pred cCCCcEEEEEEeceEEEEECCe-----EEEEccCcEEEEeCCCce-EEEEe--eeEEEEEEe
Confidence 4456789999999999877654 689999999999998532 22221 356666653
No 158
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=88.63 E-value=4.9 Score=32.47 Aligned_cols=72 Identities=13% Similarity=0.090 Sum_probs=55.4
Q ss_pred cCcccccccCcceEEEEeeceEEEEEec--CCCcEE----EEEEeCCCEEEeCCC--CeeeeeeC-CCCcEEEEEEEcCC
Q 029842 83 KNFYTEHIHADEEIRYCLEGSGYFDVRD--ESDQWI----RIWIKAGDLIVLPAG--IYHRFTLD-TSNYVKLMRLFVGE 153 (187)
Q Consensus 83 ~~~~~eH~H~~~Ei~yileG~g~f~i~~--~~d~~~----~~~v~~GDlIiIP~g--~~H~f~~~-~~~~~~~ir~f~~~ 153 (187)
++...-|-|...-++.|++|+..-..-. .++... ...+.+||.+.++++ -.|+..+. ++.+...|.+|..+
T Consensus 83 Gq~spiHDH~swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d~~avSLHvYg~p 162 (211)
T 3uss_A 83 GQITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSDRTSISIHVYGAN 162 (211)
T ss_dssp TCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSSCEEEEEEESSC
T ss_pred CCcCCCCCCCeeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCCCCEEEEEEcCCC
Confidence 4567889999899999999998665411 122211 378999999999988 79999965 46778999999887
Q ss_pred C
Q 029842 154 P 154 (187)
Q Consensus 154 ~ 154 (187)
-
T Consensus 163 l 163 (211)
T 3uss_A 163 I 163 (211)
T ss_dssp G
T ss_pred C
Confidence 5
No 159
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=87.86 E-value=2 Score=30.84 Aligned_cols=46 Identities=9% Similarity=0.065 Sum_probs=37.8
Q ss_pred cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCC
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS 141 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~ 141 (187)
..|+.=|++|++.+.+.+.+ . +....+||-..||+|..-.......
T Consensus 41 ~~E~M~vvsG~~~V~lpg~~-e--w~~~~aGesF~Vpans~F~l~v~~~ 86 (94)
T 2oyz_A 41 APERMTVVKGALVVKRVGEA-D--WTTYSSGESFDVEGNSSFELQVKDA 86 (94)
T ss_dssp SCEEEEEEESEEEEEETTCS-S--CEEEETTCEEEECSSEEEEEEESSC
T ss_pred CeEEEEEEEeEEEEEcCCCC-c--CEEECCCCEEEECCCCEEEEEEccc
Confidence 67999999999999998653 3 4667899999999998877766543
No 160
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=87.18 E-value=1.8 Score=30.78 Aligned_cols=36 Identities=17% Similarity=0.304 Sum_probs=30.3
Q ss_pred EEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 029842 116 IRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 153 (187)
Q Consensus 116 ~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (187)
++-.|++||+++||+|-+=...++. .+..|-|.+..
T Consensus 6 ~~~~l~~G~v~vVPq~~~v~~~A~~--~le~v~F~tna 41 (93)
T 1dgw_Y 6 YAATLSEGDIIVIPSSFPVALKAAS--DLNMVGIGVNA 41 (93)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESS--SEEEEEEEESC
T ss_pred hhceecCCcEEEECCCCceeEEecC--CeEEEEEEecC
Confidence 4678999999999999888888875 38888887776
No 161
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=86.31 E-value=1.1 Score=35.99 Aligned_cols=56 Identities=18% Similarity=0.329 Sum_probs=38.7
Q ss_pred cCcccccccCcce---EEEEee--ceEEEEEecCC------------------CcEEEEEEeCCCEEEeCCCCeeeeee
Q 029842 83 KNFYTEHIHADEE---IRYCLE--GSGYFDVRDES------------------DQWIRIWIKAGDLIVLPAGIYHRFTL 138 (187)
Q Consensus 83 ~~~~~eH~H~~~E---i~yile--G~g~f~i~~~~------------------d~~~~~~v~~GDlIiIP~g~~H~f~~ 138 (187)
+.|...|.|..-- ++|+-- +.|.+.+.+.. ..+..+..++||+|+.|+.+.|....
T Consensus 113 G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS~l~H~V~p 191 (216)
T 2rg4_A 113 GGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESWLRHEVPM 191 (216)
T ss_dssp TCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEETTSCEEECC
T ss_pred CCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEECCCCEEeccC
Confidence 6789999997433 444432 23444444321 34557888999999999999999986
No 162
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=86.00 E-value=2.1 Score=38.34 Aligned_cols=58 Identities=19% Similarity=0.283 Sum_probs=40.1
Q ss_pred cCcceEEEEeeceEEEEEecCCCcEEE-EEEeCCCEEEeCCCCeeeeeeCC---CCcEEEEEEEc
Q 029842 91 HADEEIRYCLEGSGYFDVRDESDQWIR-IWIKAGDLIVLPAGIYHRFTLDT---SNYVKLMRLFV 151 (187)
Q Consensus 91 H~~~Ei~yileG~g~f~i~~~~d~~~~-~~v~~GDlIiIP~g~~H~f~~~~---~~~~~~ir~f~ 151 (187)
.....|..|++|+|.+...+.. . . +.+++||.++||++..=.+.... ...+.+.|-|.
T Consensus 377 ~~~~~illv~~G~g~i~~~~~~-~--~~~~l~~G~~~fvpa~~~~~i~g~~~~~~~~~~~~~a~~ 438 (440)
T 1pmi_A 377 LNGPSIVIATNGKGTIQITGDD-S--TKQKIDTGYVFFVAPGSSIELTADSANQDQDFTTYRAFV 438 (440)
T ss_dssp CSSCEEEEEEESEEEEEETTCG-G--GCEEEETTCEEEECTTCCEEEEECSSCCSSCCEEEEEEC
T ss_pred CCCcEEEEEEeCeEEEEeCCcc-c--ceEEeccCCEEEEeCCCcEEEEEecccCCCcEEEEEEEe
Confidence 3567899999999998875320 0 2 68999999999999543344431 34466666664
No 163
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=85.99 E-value=0.5 Score=41.76 Aligned_cols=23 Identities=17% Similarity=0.263 Sum_probs=21.1
Q ss_pred EEEEeCCCEEEeCCCCeeeeeeC
Q 029842 117 RIWIKAGDLIVLPAGIYHRFTLD 139 (187)
Q Consensus 117 ~~~v~~GDlIiIP~g~~H~f~~~ 139 (187)
.+.++|||.+.||||+.|.+..+
T Consensus 241 ~v~l~pGd~~fipAG~~HAy~~G 263 (394)
T 2wfp_A 241 VVKLNPGEAMFLFAETPHAYLQG 263 (394)
T ss_dssp EEEECTTCEEEECTTCCEEEEEE
T ss_pred EEECCCCCEEEcCCCCceEcCCC
Confidence 79999999999999999998755
No 164
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=85.35 E-value=1.2 Score=38.48 Aligned_cols=38 Identities=18% Similarity=0.349 Sum_probs=28.5
Q ss_pred EEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 029842 115 WIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 153 (187)
Q Consensus 115 ~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (187)
.+.+.+++||+|.||+|-.|...+.+. .+..-.-|...
T Consensus 255 ~~~~~l~pGd~l~iP~gw~H~v~~~~~-sisv~~~f~~~ 292 (336)
T 3k2o_A 255 PLEILQKPGETVFVPGGWWHVVLNLDT-TIAITQNFASS 292 (336)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSC-EEEEEEEECCT
T ss_pred eEEEEECCCCEEEeCCCCcEEEecCCC-eEEEEcccCCc
Confidence 378999999999999999999998775 33333334443
No 165
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=82.21 E-value=1.8 Score=36.78 Aligned_cols=30 Identities=27% Similarity=0.451 Sum_probs=26.2
Q ss_pred ccCcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeee
Q 029842 90 IHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHR 135 (187)
Q Consensus 90 ~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~ 135 (187)
.|+..|=.|||+|.+ .+|+..+-|+|+.|.
T Consensus 235 iHdy~EEvY~LeG~~----------------d~G~Y~~RPpg~~HG 264 (303)
T 2qdr_A 235 IQPYNEEGYCLTGYC----------------DVGDYRIVKDHYWYC 264 (303)
T ss_dssp EECSCEEEEEEEEEE----------------EETTEEEETTEEEEE
T ss_pred eeccceeEEEEeeec----------------cCceeeEcCCCCccC
Confidence 589888899999966 349999999999998
No 166
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=81.33 E-value=2.2 Score=38.43 Aligned_cols=46 Identities=20% Similarity=0.322 Sum_probs=36.5
Q ss_pred EEEEeeceEEEEEec-------------------------CCCcEEEEEEeCCCEEEeCCCCeeeeeeCCC
Q 029842 96 IRYCLEGSGYFDVRD-------------------------ESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS 141 (187)
Q Consensus 96 i~yileG~g~f~i~~-------------------------~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~ 141 (187)
...++.|+=.|.+-. ..++++++.+++||.|+||+|-.|...+.++
T Consensus 256 w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIPsGWwH~V~nled 326 (447)
T 3kv4_A 256 WYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWIHAVLTPVD 326 (447)
T ss_dssp EEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEECTTCEEEEEESSC
T ss_pred eEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecCCCCeEEEecCCC
Confidence 557888888887632 1235789999999999999999999987765
No 167
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=80.57 E-value=1.1 Score=40.17 Aligned_cols=24 Identities=17% Similarity=0.275 Sum_probs=21.4
Q ss_pred EEEEeCCCEEEeCCCCeeeeeeCC
Q 029842 117 RIWIKAGDLIVLPAGIYHRFTLDT 140 (187)
Q Consensus 117 ~~~v~~GDlIiIP~g~~H~f~~~~ 140 (187)
.+.++|||.+.||||++|.+..+.
T Consensus 267 ~v~L~pGea~flpAg~~HAYl~G~ 290 (440)
T 1pmi_A 267 HVGLNKGEAMFLQAKDPHAYISGD 290 (440)
T ss_dssp EEEECTTCEEEECTTCCEEEEEEE
T ss_pred eEecCCCCEEecCCCCccccCCCc
Confidence 688999999999999999987653
No 168
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=80.50 E-value=1.8 Score=38.41 Aligned_cols=38 Identities=29% Similarity=0.233 Sum_probs=28.7
Q ss_pred EEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 029842 116 IRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 153 (187)
Q Consensus 116 ~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~ 153 (187)
+.+.-.+||.|+||+|-+|...+-.+.-=.+..|++.+
T Consensus 293 ~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~spe 330 (392)
T 2ypd_A 293 CTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPE 330 (392)
T ss_dssp EEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECCGG
T ss_pred EEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcChh
Confidence 47888999999999999999998775333344555544
No 169
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=80.15 E-value=3.5 Score=30.18 Aligned_cols=49 Identities=22% Similarity=0.321 Sum_probs=38.4
Q ss_pred ccccC-cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeC
Q 029842 88 EHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLD 139 (187)
Q Consensus 88 eH~H~-~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~ 139 (187)
.+..+ ..|+.=|++|++.+.+.+.+ .| ....+|+-..||+|..-.....
T Consensus 48 Y~F~T~~~E~MevvsG~l~V~LpG~~-eW--~~~~aGesF~VpanssF~lkv~ 97 (106)
T 3eo6_A 48 YTLSSEVAETIRVLSGMAYYHAEGAN-DV--QELHAGDSMVIPANQSYRLEVM 97 (106)
T ss_dssp EEECCSSCEEEEEEEEEEEEECTTCS-SC--EEEETTCEEEECSSSCEEEEEE
T ss_pred EEecCCCcEEEEEEEeEEEEECCCCc-cC--EEECCCCEEEECCCCcEEEEEC
Confidence 34443 67999999999999998753 44 6678999999999987766554
No 170
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=79.98 E-value=6.3 Score=29.01 Aligned_cols=50 Identities=14% Similarity=0.203 Sum_probs=39.7
Q ss_pred cccC-cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCC
Q 029842 89 HIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS 141 (187)
Q Consensus 89 H~H~-~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~ 141 (187)
+..+ ..|+.=|++|++...+.+.+ .| ....+|+-..||++..-.......
T Consensus 52 tF~T~~~E~MevvsG~l~V~Lpg~~-eW--~~~~aGesF~VpanssF~lkv~~~ 102 (111)
T 3hqx_A 52 TFETHVPERMEIISGECRVKIADST-ES--ELFRAGQSFYVPGNSLFKIETDEV 102 (111)
T ss_dssp EEECSSCEEEEEEESEEEEEETTCS-SC--EEEETTCEEEECTTCEEEEECSSC
T ss_pred EEcCCCcEEEEEEEeEEEEEcCCcc-cC--EEeCCCCEEEECCCCcEEEEECcc
Confidence 3443 57999999999999998753 44 667899999999999887776653
No 171
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=79.29 E-value=2.4 Score=38.17 Aligned_cols=28 Identities=32% Similarity=0.421 Sum_probs=25.2
Q ss_pred cEEEEEEeCCCEEEeCCCCeeeeeeCCC
Q 029842 114 QWIRIWIKAGDLIVLPAGIYHRFTLDTS 141 (187)
Q Consensus 114 ~~~~~~v~~GDlIiIP~g~~H~f~~~~~ 141 (187)
..+.+.+++||+|+||+|=.|...+.++
T Consensus 264 ~~~~v~l~pGE~LfIPsGWwH~V~nled 291 (451)
T 2yu1_A 264 DCQRIELKQGYTFVIPSGWIHAVYTPTD 291 (451)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEECSSC
T ss_pred cceEEEECCCcEEEeCCCceEEEecCCC
Confidence 5789999999999999999999987664
No 172
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=79.24 E-value=1.7 Score=38.57 Aligned_cols=47 Identities=17% Similarity=0.246 Sum_probs=35.9
Q ss_pred eEEEEeeceEEEEEec-------------------------CCCcEEEEEEeCCCEEEeCCCCeeeeeeCCC
Q 029842 95 EIRYCLEGSGYFDVRD-------------------------ESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS 141 (187)
Q Consensus 95 Ei~yileG~g~f~i~~-------------------------~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~ 141 (187)
-...++.|+=.|.+-. ..++++++.+++||.|+||+|-.|...+.++
T Consensus 198 ~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIPsGWwH~V~nled 269 (392)
T 3pua_A 198 AWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIPSGWIYATLTPVD 269 (392)
T ss_dssp EEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTCEEEECTTCEEEEEEEEE
T ss_pred eeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCcEEeeCCCceEEEecCCC
Confidence 3567778887777631 1235789999999999999999999876543
No 173
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=79.21 E-value=1.9 Score=38.03 Aligned_cols=55 Identities=20% Similarity=0.290 Sum_probs=39.1
Q ss_pred cccccCcce--EEEEeeceEEEEEec-------------------------CCCcEEEEEEeCCCEEEeCCCCeeeeeeC
Q 029842 87 TEHIHADEE--IRYCLEGSGYFDVRD-------------------------ESDQWIRIWIKAGDLIVLPAGIYHRFTLD 139 (187)
Q Consensus 87 ~eH~H~~~E--i~yileG~g~f~i~~-------------------------~~d~~~~~~v~~GDlIiIP~g~~H~f~~~ 139 (187)
..|.....- ...++.|+=.|.+-. ..++++++.+++||.|+||+|-.|...+.
T Consensus 161 ~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIPsGWwH~V~nl 240 (371)
T 3k3o_A 161 DFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWIHAVLTP 240 (371)
T ss_dssp EEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEETTCEEEECTTCEEEEEEE
T ss_pred CeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEEEEECCCcEEEeCCCCeEEEecC
Confidence 345444322 456788887777631 12457899999999999999999998875
Q ss_pred CC
Q 029842 140 TS 141 (187)
Q Consensus 140 ~~ 141 (187)
++
T Consensus 241 ed 242 (371)
T 3k3o_A 241 VD 242 (371)
T ss_dssp EE
T ss_pred CC
Confidence 43
No 174
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=78.50 E-value=4.8 Score=34.32 Aligned_cols=50 Identities=18% Similarity=0.232 Sum_probs=27.8
Q ss_pred ccccccC-c-ceEEEEe-ec-eEEEEEecCCCcEEEEEEeCCCEEEeCCCCeee
Q 029842 86 YTEHIHA-D-EEIRYCL-EG-SGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHR 135 (187)
Q Consensus 86 ~~eH~H~-~-~Ei~yil-eG-~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~ 135 (187)
++.|+|+ . ++.+|+- .. ...|.+-+..|+-+.+.|+-||.|++|+|=+|.
T Consensus 196 yPpHkHDrr~E~yyYF~l~p~~~v~h~~g~pdEtrh~~V~n~daVlvP~wgyHp 249 (289)
T 1ywk_A 196 MPCHTHERRMEAYVYFDMEEDTRIFHMMGKPDETKHLVMSNEQAAISPSWSIHS 249 (289)
T ss_dssp --------CEEEEEEESCCTTCCEEEEESSTTSCEEEEECTTEEEEECTTSCCC
T ss_pred CCCccCCCCCeeEEEEEeCCCCeEEEECCCCCceEEEEEECCCEEEeCCCcccC
Confidence 6789998 3 3444432 11 234444455666666889999999999998896
No 175
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=78.12 E-value=1.9 Score=39.75 Aligned_cols=58 Identities=21% Similarity=0.318 Sum_probs=40.1
Q ss_pred CcccccccCc--ceEEEEeeceEEEEEecC-------------------------CCcEEEEEEeCCCEEEeCCCCeeee
Q 029842 84 NFYTEHIHAD--EEIRYCLEGSGYFDVRDE-------------------------SDQWIRIWIKAGDLIVLPAGIYHRF 136 (187)
Q Consensus 84 ~~~~eH~H~~--~Ei~yileG~g~f~i~~~-------------------------~d~~~~~~v~~GDlIiIP~g~~H~f 136 (187)
.+...|.-.. .-.+.++.|+=.|.+--. .+.++++.++|||.|+||+|-.|..
T Consensus 307 S~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s~~~~~wfgd~l~~~~~~v~l~pGEtlfIPsGW~HaV 386 (528)
T 3pur_A 307 SYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIPAGWIHAV 386 (528)
T ss_dssp EEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSSCCSCCGGGGTTTCCEEEEEETTCEEEECTTCEEEE
T ss_pred CCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccCCchhhhhcccccccEEEEEECCCCEEEecCCceEEE
Confidence 3444455432 245677777777765321 2357899999999999999999998
Q ss_pred eeCCC
Q 029842 137 TLDTS 141 (187)
Q Consensus 137 ~~~~~ 141 (187)
.+..+
T Consensus 387 ~tleD 391 (528)
T 3pur_A 387 LTPVD 391 (528)
T ss_dssp EEEEE
T ss_pred ecCCC
Confidence 77543
No 176
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=77.62 E-value=6.9 Score=33.21 Aligned_cols=49 Identities=14% Similarity=0.175 Sum_probs=33.8
Q ss_pred ccccccC--cceEEEEe---eceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeee
Q 029842 86 YTEHIHA--DEEIRYCL---EGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHR 135 (187)
Q Consensus 86 ~~eH~H~--~~Ei~yil---eG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~ 135 (187)
++.|+|+ .+|.+|+- +|.+.-.+ +..++-..+.|+-||.|++|..-.|.
T Consensus 196 yPpHkHDrr~EeyyYF~l~~~gfv~q~~-g~p~Etrhi~V~n~daVlvP~wh~h~ 249 (282)
T 1xru_A 196 MPCHTHERRMEVYFYFNMDDDACVFHMM-GQPQETRHIVMHNEQAVISPSWSIHS 249 (282)
T ss_dssp CSEEECTTEEEEEEEESCCTTCCEEEEE-EETTEEEEEEECSSEEEEECTTCEEE
T ss_pred CCCccCCCCceEEEEEEeCCCCEEEEEe-CCCCCeeEEEEECCCEEEeCCCCCCC
Confidence 7899998 46776663 23343334 45566556789999999999755666
No 177
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=75.98 E-value=2.3 Score=38.61 Aligned_cols=56 Identities=20% Similarity=0.235 Sum_probs=40.7
Q ss_pred ccccccCcce--EEEEeeceEEEEEecC-------------------------CCcEEEEEEeCCCEEEeCCCCeeeeee
Q 029842 86 YTEHIHADEE--IRYCLEGSGYFDVRDE-------------------------SDQWIRIWIKAGDLIVLPAGIYHRFTL 138 (187)
Q Consensus 86 ~~eH~H~~~E--i~yileG~g~f~i~~~-------------------------~d~~~~~~v~~GDlIiIP~g~~H~f~~ 138 (187)
...|.....- ...++.|+=.|.+-.. .++++++.+++||.|+||+|-.|...+
T Consensus 279 T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsGWwH~V~n 358 (488)
T 3kv5_D 279 TDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWIHAVLT 358 (488)
T ss_dssp EEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTTCEEEEEE
T ss_pred CCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCCCceEEeeC
Confidence 4445554332 5577888888877422 235789999999999999999999887
Q ss_pred CCC
Q 029842 139 DTS 141 (187)
Q Consensus 139 ~~~ 141 (187)
-++
T Consensus 359 led 361 (488)
T 3kv5_D 359 SQD 361 (488)
T ss_dssp EEE
T ss_pred CCC
Confidence 543
No 178
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=74.87 E-value=2.7 Score=37.36 Aligned_cols=58 Identities=19% Similarity=0.251 Sum_probs=40.4
Q ss_pred CcccccccCcc--eEEEEeeceEEEEEecC-------------------------CCcEEEEEEeCCCEEEeCCCCeeee
Q 029842 84 NFYTEHIHADE--EIRYCLEGSGYFDVRDE-------------------------SDQWIRIWIKAGDLIVLPAGIYHRF 136 (187)
Q Consensus 84 ~~~~eH~H~~~--Ei~yileG~g~f~i~~~-------------------------~d~~~~~~v~~GDlIiIP~g~~H~f 136 (187)
.+...|..... -...++.|+=.|.+-.. .+.++++.+++||.++||+|-.|..
T Consensus 186 S~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfIPsGW~H~V 265 (397)
T 3kv9_A 186 SYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWIHAV 265 (397)
T ss_dssp CEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEECTTCEEEE
T ss_pred CCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEeCCCCeEEc
Confidence 33444555432 24567777777766421 2357899999999999999999998
Q ss_pred eeCCC
Q 029842 137 TLDTS 141 (187)
Q Consensus 137 ~~~~~ 141 (187)
.+-++
T Consensus 266 ~nled 270 (397)
T 3kv9_A 266 LTSQD 270 (397)
T ss_dssp EEEEE
T ss_pred cCCcC
Confidence 87543
No 179
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=74.69 E-value=4 Score=35.38 Aligned_cols=42 Identities=21% Similarity=0.178 Sum_probs=30.0
Q ss_pred cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCceE
Q 029842 114 QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWT 157 (187)
Q Consensus 114 ~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~~gw~ 157 (187)
.++++.=+|||+|+++||.+||.-+.+- -..+-.-..++-|.
T Consensus 277 Pvyr~~QkpGd~Vi~~PgayH~v~n~G~--~~n~awN~a~~~~~ 318 (332)
T 2xxz_A 277 PVYRFVQRPGDLVWINAGTVHWVQATGW--CNNIAWNVGPLTAY 318 (332)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEEESSS--EEEEEEEEESCTTG
T ss_pred CeEEEEECCCCEEEECCCceEEEEecce--eeEEEEEeCCCcHH
Confidence 3567888899999999999999776542 34455555555454
No 180
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=73.94 E-value=9.9 Score=26.51 Aligned_cols=58 Identities=16% Similarity=0.015 Sum_probs=38.3
Q ss_pred cceEEEEeeceEEEEEecCCC-cEEEEEEeCCCEEEeC---CCCeeeeeeCCCCcEEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLP---AGIYHRFTLDTSNYVKLMRLF 150 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d-~~~~~~v~~GDlIiIP---~g~~H~f~~~~~~~~~~ir~f 150 (187)
.+.+++|++|.......+.++ ......+.+||++=.. .+.++.++.....+..++++-
T Consensus 46 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~~~~i~ 107 (149)
T 2pqq_A 46 GDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELIGELSLFDPGPRTATGTALTEVKLLALG 107 (149)
T ss_dssp ECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEESGGGGTSCEECSSEEEESSCEEEEEEE
T ss_pred CCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEechHHhcCCCCcceEEEEccceEEEEEe
Confidence 467999999999988776544 4556788999987322 244555554444455555553
No 181
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=72.73 E-value=4.2 Score=37.26 Aligned_cols=65 Identities=22% Similarity=0.172 Sum_probs=41.8
Q ss_pred EEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCceEEeCCCCCCcHHHHHHHHhhcCCCCCCcc
Q 029842 115 WIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYIKGLTGQAGVPVE 185 (187)
Q Consensus 115 ~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~~gw~~~~r~~d~~~~r~~y~~~~~~~~~~~~~ 185 (187)
++++.=+|||+|+++||++||.-+.+- -.-+-.-...+-|..+ .....|.++-+..+.+.-||.+
T Consensus 312 vyr~iQkPGdfVit~PgtyH~Vqs~Gf--~~niaWNvap~t~~ql----qlA~e~y~~n~~~~~~SivPm~ 376 (510)
T 4ask_A 312 VYRFVQRPGDLVWINAGTVHWVQATGW--CNNIAWNVGPLTAYQY----QLALERYEWNEVKNVKSIVPMI 376 (510)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSS--EEEEEEEECBSSHHHH----HHHHHHHHHHHHTTCCCSSCHH
T ss_pred eEEEEECCCCEEEECCCceEEEEecCe--eeeeEEEecCCCHHHH----HHHHHHHHHHHHhCcCcccChH
Confidence 456777899999999999999876652 2334444444433321 2344566666666666777754
No 182
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=69.42 E-value=18 Score=27.34 Aligned_cols=53 Identities=11% Similarity=0.120 Sum_probs=34.6
Q ss_pred cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|.........+...+.-.+.+||++-. ++.++.....+..++++
T Consensus 45 ~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~~G~----~~~~~~~A~~~~~v~~i 97 (220)
T 2fmy_A 45 RNLVFLVKSGRVRVYLAYEDKEFTLAILEAGDIFCT----HTRAFIQAMEDTTILYT 97 (220)
T ss_dssp SCEEEEEEESEEEEEEECSSCEEEEEEEETTCEEES----CSSSEEEESSSEEEEEE
T ss_pred CCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEeCC----ccceEEEEcCcEEEEEE
Confidence 567999999999985443333466678899999866 33334333334555555
No 183
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=69.09 E-value=9 Score=26.57 Aligned_cols=57 Identities=9% Similarity=0.067 Sum_probs=34.2
Q ss_pred cceEEEEeeceEEEEEecCCC-cEE---EEEEeCCCEEEeC---CCCeeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESD-QWI---RIWIKAGDLIVLP---AGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d-~~~---~~~v~~GDlIiIP---~g~~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|.......+.++ ..+ ...+.+||++=.. .+.++.++.....+..++++
T Consensus 47 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG~~~~~~~~~~~~~~~a~~~~~~~~i 110 (142)
T 3mdp_A 47 ADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFGVSSLIKPYHYTSSARATKPVRVVDI 110 (142)
T ss_dssp CCEEEEEEESCEEEECC---------CEEEEECTTCEECGGGSSTTCBCSSEEEESSCEEEEEE
T ss_pred CCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEechHHHcCCCCceEEEEECCcEEEEEE
Confidence 578999999999988765554 344 5678999987433 34555455444444555554
No 184
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=66.59 E-value=7.7 Score=31.09 Aligned_cols=56 Identities=14% Similarity=0.074 Sum_probs=37.5
Q ss_pred cCcceEEEEeeceEEEEEe-cCCCcEEEEEEeCCCEEEeCCCCee---eeeeCCCCcEEEEEEEc
Q 029842 91 HADEEIRYCLEGSGYFDVR-DESDQWIRIWIKAGDLIVLPAGIYH---RFTLDTSNYVKLMRLFV 151 (187)
Q Consensus 91 H~~~Ei~yileG~g~f~i~-~~~d~~~~~~v~~GDlIiIP~g~~H---~f~~~~~~~~~~ir~f~ 151 (187)
...--+.|+++|+..+.++ ++ .+.+.+||.+++-....- .........+..|+++.
T Consensus 138 ~~~~~~v~~l~G~~~v~~~~~~-----~~~L~~~d~l~~~~~~~~~~~~~~~~g~~~~~~i~l~~ 197 (200)
T 1yll_A 138 TASTLLLFAQQDGVAISLQGQP-----RGQLAAHDCLCAEGLQGLQHWRLTAHEPAWVCAVELDS 197 (200)
T ss_dssp CCSEEEEEESSSCEEEEETTEE-----EEEECTTCEEEEESCCSCEEEEEEEEEEEEEEEEEEEE
T ss_pred CCCEEEEEEccCcEEEEcCCCc-----eeecCCCCEEEEeCCCccceeEeccCCceEEEEEEEec
Confidence 3455789999999888775 34 789999999998655322 23333334455556553
No 185
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=66.57 E-value=20 Score=27.27 Aligned_cols=52 Identities=6% Similarity=0.164 Sum_probs=34.0
Q ss_pred cceEEEEeeceEEEEEecCCC-cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d-~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|....... .++ ..+.-.+.+||++- .++.+++....+..++++
T Consensus 41 ~~~~y~i~~G~v~~~~~-~~G~~~~~~~~~~G~~fG----~~~~~~~~A~~~~~v~~i 93 (222)
T 1ft9_A 41 ENGVFVVVDGRLRVYLV-GEEREISLFYLTSGDMFC----MHSGCLVEATERTEVRFA 93 (222)
T ss_dssp CCCEEEEEESEEEEEEE-ETTEEEEEEEEETTCEEE----SCSSCEEEESSCEEEEEE
T ss_pred CCeEEEEEecEEEEEEC-CCCCEEEEEEcCCCCEec----CCCCEEEEEccceEEEEE
Confidence 56799999999988643 444 45667889999987 333333333334555555
No 186
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=66.27 E-value=22 Score=25.44 Aligned_cols=56 Identities=9% Similarity=-0.152 Sum_probs=35.7
Q ss_pred cceEEEEeeceEEEEEecCCC-cEEEEEEeCCCEEEe---CCCCeeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVL---PAGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d-~~~~~~v~~GDlIiI---P~g~~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|....... .++ ....-.+.+||++=- -.+.++.++.....+..++++
T Consensus 79 ~~~~y~i~~G~v~~~~~-~~g~~~~~~~~~~G~~fGe~~~~~~~~~~~~v~A~~~~~~~~i 138 (161)
T 3idb_B 79 GDNFYVIDRGTFDIYVK-CDGVGRCVGNYDNRGSFGELALMYNTPRAATITATSPGALWGL 138 (161)
T ss_dssp CCEEEEEEESEEEEEEE-ETTEEEEEEEEESCCEECGGGGTCCCCCSSEEEESSSEEEEEE
T ss_pred CcEEEEEEeCEEEEEEc-CCCCeEEEEEcCCCCEechHHHHcCCCcccEEEECCCeEEEEE
Confidence 56899999999999884 444 455667899997631 224455444444444455444
No 187
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=65.67 E-value=7.7 Score=35.71 Aligned_cols=43 Identities=23% Similarity=0.222 Sum_probs=31.8
Q ss_pred EEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCceEEe
Q 029842 115 WIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAY 159 (187)
Q Consensus 115 ~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~~gw~~~ 159 (187)
++++.=+|||+|+++||++||.-+.+- -..+-.-...+-|.++
T Consensus 337 vyr~vQkpGd~Vi~~PgayH~v~n~G~--~~n~awN~a~~~~~q~ 379 (531)
T 3avr_A 337 VYRFIQRPGDLVWINAGTVHWVQAIGW--CNNIAWNVGPLTACQY 379 (531)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSS--EEEEEEEECCSSHHHH
T ss_pred eEEEEECCCCEEEECCCceEEEEecce--eeeeEEEeccCchHHH
Confidence 457777899999999999999877663 3445555566666654
No 188
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=65.16 E-value=14 Score=27.38 Aligned_cols=57 Identities=9% Similarity=0.032 Sum_probs=39.1
Q ss_pred cceEEEEeeceEEEEEecCCC-cEEEEEEeCCCEEE-eC---CCCeeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIV-LP---AGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d-~~~~~~v~~GDlIi-IP---~g~~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|.......+.+| +.+.-.+.+||++- +. .+.++.++.....+..++++
T Consensus 48 ~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~ge~~~~~~~~~~~~~~~a~~~~~v~~i 109 (194)
T 3dn7_A 48 CRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLSDYMAFQKQQPADFYIQSVENCELLSI 109 (194)
T ss_dssp CCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEECCHHHHHHTCBCSSEEEESSCEEEEEE
T ss_pred eeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEeehHHHhcCCCCceEEEEECCEEEEEE
Confidence 578999999999988765555 45666789999985 32 34555555544445566555
No 189
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=64.88 E-value=23 Score=26.50 Aligned_cols=58 Identities=10% Similarity=0.046 Sum_probs=38.5
Q ss_pred CcceEEEEeeceEEEEEecCCCc-EEEEEEeCCCEEEe-----CCCCeeeeeeCCCCcEEEEEE
Q 029842 92 ADEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVL-----PAGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 92 ~~~Ei~yileG~g~f~i~~~~d~-~~~~~v~~GDlIiI-----P~g~~H~f~~~~~~~~~~ir~ 149 (187)
..+.+++|++|.......+.+|+ .+...+.+||++.+ -.+.++.++.....+..++++
T Consensus 43 ~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~a~~~~~~~~i 106 (220)
T 3dv8_A 43 DCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCLLSASCIMRSIQFEVTIEAEKDTDLWII 106 (220)
T ss_dssp CCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESGGGGGGCTTCCCCCEEEESSCEEEEEE
T ss_pred CcceEEEEEeceEEEEEECCCCCEEEEEecCCCCeeehhHHHHhCCCCCceEEEEeeeeEEEEE
Confidence 35689999999999887666554 55667889999632 234455555444445555555
No 190
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=63.79 E-value=28 Score=27.99 Aligned_cols=54 Identities=19% Similarity=0.202 Sum_probs=38.8
Q ss_pred ccccccCcceEEEEeeceEEEEEecCCCcEEEEEEeC----CC--EEEeCCCCeeeeeeC
Q 029842 86 YTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKA----GD--LIVLPAGIYHRFTLD 139 (187)
Q Consensus 86 ~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~----GD--lIiIP~g~~H~f~~~ 139 (187)
...|.-..+||.+...|.+.+.+-..++..-++.+.+ |+ -++||+|+.......
T Consensus 93 S~wHRv~sdEiW~~h~G~p~~~li~~dg~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~ 152 (203)
T 1xe7_A 93 GKFHKNINRIIHILQRGKGQYVLVYPDGQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLL 152 (203)
T ss_dssp EEEEEESSCEEEEEEEECEEEEEECTTSCEEEEEESSCGGGTCBSEEEECTTCEEEEEEC
T ss_pred ccceeeCCCEEEEEEcCCccEEEEcCCCCEEEEEeCCCcccCcccEEEEcCCEEEEeEec
Confidence 4445557999999999977665554566665666654 44 389999998887654
No 191
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=63.34 E-value=24 Score=26.23 Aligned_cols=57 Identities=18% Similarity=0.222 Sum_probs=37.5
Q ss_pred cceEEEEeeceEEEEEecCCCc-EEEEEEeCCCEEEeCC---CC-eeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVLPA---GI-YHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~-~~~~~v~~GDlIiIP~---g~-~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|.......+.+++ .+...+.+||++-..+ +. ++.++.....+..++++
T Consensus 37 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~~~~~v~~i 98 (210)
T 3ryp_A 37 AETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEI 98 (210)
T ss_dssp CCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCSSEEEESSCEEEEEE
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHHhcCCCCceEEEEECCcEEEEEE
Confidence 5679999999999987766554 5666789999984322 22 44444433444555555
No 192
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=63.00 E-value=45 Score=26.05 Aligned_cols=55 Identities=9% Similarity=0.061 Sum_probs=40.9
Q ss_pred CcccccccCcceEEEEeeceE-EEEEecCCCcEEEEEEe----CCC---EEEeCCCCeeeeee
Q 029842 84 NFYTEHIHADEEIRYCLEGSG-YFDVRDESDQWIRIWIK----AGD---LIVLPAGIYHRFTL 138 (187)
Q Consensus 84 ~~~~eH~H~~~Ei~yileG~g-~f~i~~~~d~~~~~~v~----~GD---lIiIP~g~~H~f~~ 138 (187)
.+...|.=+.+|+.+...|.. .+.+-+.++....+.+. +|+ -++||+|+......
T Consensus 64 ~~S~~HRv~sdEiW~~~~G~pL~l~~~~~dG~~~~~~LG~d~~~Ge~~pQ~vVP~G~WqaA~~ 126 (172)
T 3loi_A 64 QPDPFHRVKSDETFVHNLGGSMKIHMIHPDGSYSCSILGNPLEHPEARHQVVVPRRVWFAQEV 126 (172)
T ss_dssp CCEEEEECSSEEEEEEEEESCEEEEEECTTSCEEEEEESCTTTSTTCBSEEEECTTCEEEEEE
T ss_pred CCccCEEecCCEEEEEEcCCCEEEEEEcCCCceEEEEeCCCcccCCcceEEEECCCEEEEEEe
Confidence 445555557899999999986 56666566777777765 577 58999999777666
No 193
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=62.73 E-value=23 Score=26.79 Aligned_cols=57 Identities=14% Similarity=0.228 Sum_probs=36.8
Q ss_pred cceEEEEeeceEEEEEecCCC-cEEEEEEeCCCEEEeC----CCCeeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLP----AGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d-~~~~~~v~~GDlIiIP----~g~~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|.......+.+| +.+.-.+.+||++-.. .+.++.++.....+..++++
T Consensus 52 ~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~~~~~v~~i 113 (230)
T 3iwz_A 52 AGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVGEMGLFIESDTREVILRTRTQCELAEI 113 (230)
T ss_dssp CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCGGGTSCCSBCCSEEEESSCEEEEEE
T ss_pred CCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEEehhhhcCCCCceeEEEEcCcEEEEEE
Confidence 578999999999988766655 4566778999998432 22334444333334555554
No 194
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=62.23 E-value=20 Score=26.64 Aligned_cols=57 Identities=14% Similarity=-0.021 Sum_probs=38.2
Q ss_pred cceEEEEeeceEEEEEecCCC-cEEEEEEeCCCEEEe--CCCCeeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVL--PAGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d-~~~~~~v~~GDlIiI--P~g~~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|.......+.++ ..+.-.+.+||++=- =.+.++.++.....+..++++
T Consensus 17 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~Ge~~~~~~~~~~~~~A~~~~~v~~i 76 (195)
T 3b02_A 17 ARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGEEALEGKAYRYTAEAMTEAVVQGL 76 (195)
T ss_dssp CCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEECGGGGTCSBCSSEEEESSSEEEEEE
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEechhhhCCCCceeEEEECCcEEEEEE
Confidence 467999999999988765554 455668899998843 123455555544455666655
No 195
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=61.70 E-value=7.3 Score=33.10 Aligned_cols=52 Identities=15% Similarity=0.232 Sum_probs=33.4
Q ss_pred ccccC-cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeee-eeCCCCcEEEEEE
Q 029842 88 EHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRF-TLDTSNYVKLMRL 149 (187)
Q Consensus 88 eH~H~-~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f-~~~~~~~~~~ir~ 149 (187)
+=.|. +-| +|||+|+..+ + . ..+.+|..+.+|+|+.=-. ..-....+..|-|
T Consensus 106 ~Gi~~ad~E-~fVL~G~i~~--G-~------~~l~~h~Y~f~PaGV~~~~~kv~~~~g~~iL~f 159 (303)
T 2qdr_A 106 SGIFTADLE-IFVIKGAIQL--G-E------WQLNKHSYSFIPAGVRIGSWKVLGGEEAEILWM 159 (303)
T ss_dssp CBEESSCEE-EEEEESEEEE--T-T------EEECTTEEEEECTTCCBCCEEEETTSCEEEEEE
T ss_pred CcccccceE-EEEEEeEEEe--C-C------EEecCCceEEecCCCccCceeecCCCCcEEEEE
Confidence 33444 556 9999887654 3 2 6789999999999985532 2322334555555
No 196
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=60.30 E-value=1.2 Score=32.18 Aligned_cols=30 Identities=23% Similarity=0.426 Sum_probs=24.2
Q ss_pred EEEeec--eEEEEEecCCCcEEEEEEeCCCEEEeCC
Q 029842 97 RYCLEG--SGYFDVRDESDQWIRIWIKAGDLIVLPA 130 (187)
Q Consensus 97 ~yileG--~g~f~i~~~~d~~~~~~v~~GDlIiIP~ 130 (187)
-|++.| +|...++|.. ...+++||+|+|=+
T Consensus 32 TYvI~GerSG~I~lNGAA----Arl~~~GD~vII~a 63 (97)
T 1uhe_A 32 TYVILGKKRGEICVNGAA----ARKVAIGDVVIILA 63 (97)
T ss_dssp EECEEECSTTCEEEEGGG----GGGCCTTCEEEEEE
T ss_pred EEEEeeccCCeEEEchHH----HccCCCCCEEEEEE
Confidence 578888 6889999865 67889999998743
No 197
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=58.47 E-value=10 Score=31.14 Aligned_cols=46 Identities=9% Similarity=0.099 Sum_probs=32.3
Q ss_pred CcEEEEEEeCCCEEEeCCCCeeeeeeC-C-CCc-EEEEEEEcCCCceEE
Q 029842 113 DQWIRIWIKAGDLIVLPAGIYHRFTLD-T-SNY-VKLMRLFVGEPVWTA 158 (187)
Q Consensus 113 d~~~~~~v~~GDlIiIP~g~~H~f~~~-~-~~~-~~~ir~f~~~~gw~~ 158 (187)
..++.+.+++||+++.-+.+.|+-... + ..+ ...+++......|.+
T Consensus 213 ~~~v~~~~~aGd~vlf~~~~~H~s~~N~s~~~R~~~~~~y~~~~~~y~~ 261 (308)
T 2a1x_A 213 KARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYID 261 (308)
T ss_dssp SCCEEECBCTTCEEEECTTCCEEECCBCSSSCEEEEEEEEEETTCEECC
T ss_pred CCeEEccCCCccEEEECCCccccCCCCCCCCceEEEEEEEECCCceEcc
Confidence 467899999999999999999998743 2 223 344456655544443
No 198
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=58.09 E-value=31 Score=27.12 Aligned_cols=57 Identities=18% Similarity=0.222 Sum_probs=37.7
Q ss_pred cceEEEEeeceEEEEEecCCCc-EEEEEEeCCCEEEeCC---CC-eeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVLPA---GI-YHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~-~~~~~v~~GDlIiIP~---g~-~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|.......+.+++ .+.-.+.+||++=..+ +. ++.++.....+..++++
T Consensus 87 ~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~Ge~~~~~~~~~~~~~~~A~~~~~l~~i 148 (260)
T 3kcc_A 87 AETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEI 148 (260)
T ss_dssp CCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCCSEEEESSCEEEEEE
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehHHhCCCCCCceEEEECCCeEEEEE
Confidence 5679999999999887765554 5667789999984332 22 44444444444555555
No 199
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=57.88 E-value=54 Score=25.08 Aligned_cols=56 Identities=9% Similarity=0.170 Sum_probs=34.2
Q ss_pred cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCC---CC----eeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPA---GI----YHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~---g~----~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|.......+.+|+...+.+-+||++-..+ +. .+..++.. ....++++
T Consensus 36 ~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~G~~~Ge~~~~~~~~~~~~~~~~a~~-~~~~v~~i 98 (238)
T 2bgc_A 36 QEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMSGFIDTETSVGYYNLEVIS-EQATAYVI 98 (238)
T ss_dssp CCEEEEEEESEEEEEEECTTSCEEEEEEEESSEEEESBCTTTCCBSCCCEEEECS-SEEEEEEE
T ss_pred CceEEEEEecEEEEEEECCCCCEEEEEEcCCCEecchhhhcCCCcCcceeEEEEE-cceEEEEE
Confidence 46799999999998876666553333333999985443 22 34444443 34555555
No 200
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=55.44 E-value=43 Score=24.70 Aligned_cols=57 Identities=12% Similarity=0.142 Sum_probs=36.5
Q ss_pred cceEEEEeeceEEEEEecCCC-cEEEEEEeCCCEEEeCC---CC----eeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLPA---GI----YHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d-~~~~~~v~~GDlIiIP~---g~----~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|.......+.+| +.+.-.+.+||++=..+ +. ++.++.....+..++++
T Consensus 31 ~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~A~~~~~v~~i 95 (207)
T 2oz6_A 31 CETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAKVECEVAEI 95 (207)
T ss_dssp CCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEESCTTTCC-----CBCCSEEEESSCEEEEEE
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcccHHHhcCCCCCCCcceEEEECCcEEEEEE
Confidence 567999999999988766554 45667889999974321 22 34444433444555555
No 201
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=55.33 E-value=21 Score=26.99 Aligned_cols=57 Identities=16% Similarity=0.091 Sum_probs=36.5
Q ss_pred cceEEEEeeceEEEEEecCCCc-EEEEEEeCCCEEEe----CCCCeeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVL----PAGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~-~~~~~v~~GDlIiI----P~g~~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|.......+.+|+ .+.-.+.+||++=. -.+.++.+++.......++++
T Consensus 40 ~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~A~~~~~v~~i 101 (213)
T 1o5l_A 40 IEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQIIASGFIFSSEPRFPVNVVAGENSKILSI 101 (213)
T ss_dssp CCEEEEEEESCEEEEEECTTSCEEEEEEECSSEESSGGGTTSSSCBCSSEEEESSSEEEEEE
T ss_pred cceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEeeeHHHhcCCCCceEEEEEccceEEEEE
Confidence 4578999999999887655554 55667899998732 122244444444445555555
No 202
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=55.21 E-value=27 Score=26.43 Aligned_cols=57 Identities=9% Similarity=0.029 Sum_probs=37.1
Q ss_pred cceEEEEeeceEEEEEecCCCc-EEEEEEeCCCEEEeC---CCCeeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVLP---AGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~-~~~~~v~~GDlIiIP---~g~~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|.......+.+++ .+.-.+.+||++=.. .+.++.+++....+..++++
T Consensus 47 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~~~~~v~~i 107 (227)
T 3d0s_A 47 GDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVRAVSM 107 (227)
T ss_dssp CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCHHHHSCSCCSSEEEESSCEEEEEE
T ss_pred CCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEeeHHHcCCCCceeEEEEcccEEEEEE
Confidence 5679999999999888765554 556688999987321 23444444443444555555
No 203
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=51.75 E-value=28 Score=30.55 Aligned_cols=54 Identities=11% Similarity=0.014 Sum_probs=29.5
Q ss_pred cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCceEEeCCCCCCcHHH
Q 029842 114 QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPAR 169 (187)
Q Consensus 114 ~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~~gw~~~~r~~d~~~~r 169 (187)
.+.++.-++||+|++=||.+|+.-+.+-+ .+..+.-..+-|.++.+.+..-.|+
T Consensus 303 pv~r~vQ~pGEfViTfP~aYH~gfn~Gfn--~aEAvNFA~~~Wl~~g~~a~~C~C~ 356 (373)
T 3opt_A 303 RCNEIVHHEGEFMITYPYGYHAGFNYGYN--LAESVNFALEEWLPIGKKAGKCHCI 356 (373)
T ss_dssp CCEEEEECTTCEEEECTTCCEEEEESSSE--EEEEEEECCC---------------
T ss_pred ceEEEEECCCCEEEECCCceEEEEecCcc--HHHHHccCcHHHHHhhccCccCccc
Confidence 35688889999999999999997776644 4444444568899987765444444
No 204
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=51.53 E-value=29 Score=25.84 Aligned_cols=57 Identities=9% Similarity=-0.017 Sum_probs=37.8
Q ss_pred cceEEEEeeceEEEEEecCCC-cEEEEEEeCCCEEEeC---CCCeeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLP---AGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d-~~~~~~v~~GDlIiIP---~g~~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|.......+.++ ..+.-.+.+||++=.. .+.++.++.....+..++++
T Consensus 40 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~v~~i 100 (216)
T 4ev0_A 40 GQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLLDEGERSASAVAVEDTELLAL 100 (216)
T ss_dssp CCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHHHCCBCSSEEEESSSEEEEEE
T ss_pred CCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhcCCCCcceEEEEcCCEEEEEE
Confidence 568999999999988876555 4566778999987421 23444444444444555555
No 205
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=51.44 E-value=80 Score=26.35 Aligned_cols=66 Identities=17% Similarity=0.135 Sum_probs=45.0
Q ss_pred CCCeeeeeeeCcccccCHHHHhcCcccccccCcceEEEEeeceEEEEEecCCCcEEEEEE--eC--------CCEEEeCC
Q 029842 61 GYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWI--KA--------GDLIVLPA 130 (187)
Q Consensus 61 Gy~~~dvv~v~~~~~p~~~~~~~~~~~eH~H~~~Ei~yileG~g~f~i~~~~d~~~~~~v--~~--------GDlIiIP~ 130 (187)
.|...+++.+.++. -+...+-..+-....|.|++.+.++++ .+.+ .. .|.|.||.
T Consensus 27 ~y~~f~~~~L~~Ge----------~~~~~~~~~E~~iv~l~G~~~V~~~g~-----~~~~~g~R~svF~~~~p~~lYvp~ 91 (270)
T 2qjv_A 27 EYVGFDVWQLXAGE----------SITLPSDERERCLVLVAGLASVXAADS-----FFYRIGQRMSPFERIPAYSVYLPH 91 (270)
T ss_dssp SSCEEEEEEECTTC----------EEEECCSSEEEEEEEEESCEEEEETTE-----EEEEECCCSSGGGCSCCCEEEECS
T ss_pred EEeEEEEEEecCCC----------EEEecCCCcEEEEEEecceEEEEECCE-----EEeccccccccccCCCCcEEEECC
Confidence 55567777777642 223333345566777899999999876 5644 22 59999999
Q ss_pred CCeeeeeeCCC
Q 029842 131 GIYHRFTLDTS 141 (187)
Q Consensus 131 g~~H~f~~~~~ 141 (187)
|..=.+++.+.
T Consensus 92 g~~v~i~a~~~ 102 (270)
T 2qjv_A 92 HTEAXVTAETD 102 (270)
T ss_dssp SCCEEEEESSS
T ss_pred CCEEEEEecCC
Confidence 99666776654
No 206
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=50.92 E-value=15 Score=29.65 Aligned_cols=40 Identities=15% Similarity=0.228 Sum_probs=29.8
Q ss_pred CcEEEEEEeCCCEEEeCCCCeeeeeeCCCC--c----EEEEEEEcC
Q 029842 113 DQWIRIWIKAGDLIVLPAGIYHRFTLDTSN--Y----VKLMRLFVG 152 (187)
Q Consensus 113 d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~--~----~~~ir~f~~ 152 (187)
..++.+.+++||+|+.-..+.|+......+ + ...+|+...
T Consensus 208 ~~~v~~~~~aGdv~lf~~~~~H~s~~N~s~~~R~~R~s~~~~~~~~ 253 (288)
T 2rdq_A 208 EHLLHSPMEPGDILLFHAHMCHKSIPNLSKDPRLMRMSMDTRVQPA 253 (288)
T ss_dssp SCEECCCCCTTCEEEEETTCCEEEECCCCCTTCCCEEEEEEEEEET
T ss_pred CceeecccCCCCEEEEeCCceecCCCCCCCCccceEEEEEEEEecC
Confidence 357889999999999999999998754322 1 445566655
No 207
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=50.57 E-value=33 Score=26.08 Aligned_cols=57 Identities=7% Similarity=0.021 Sum_probs=37.0
Q ss_pred cceEEEEeeceEEEEEecCCCc-EEEEEEeCCCEEEeC---CCCeeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVLP---AGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~-~~~~~v~~GDlIiIP---~g~~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|.......+.+|+ .+.-.+.+||++=.. .+.++.+++....+..++++
T Consensus 52 ~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~a~~~~~v~~i 112 (237)
T 3fx3_A 52 AQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESFGEAVALRNTPYPVSAEAVTPCEVMHI 112 (237)
T ss_dssp CCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEECHHHHHHTCCCSSEEEESSSEEEEEE
T ss_pred cceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEechHHHhcCCCCCceEEECCceEEEEE
Confidence 5689999999999888665554 566678999987322 13344444433344555554
No 208
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=50.56 E-value=57 Score=25.12 Aligned_cols=35 Identities=17% Similarity=0.169 Sum_probs=27.5
Q ss_pred cceEEEEeeceEEEEEecCCCc-EEEEEEeCCCEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIV 127 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~-~~~~~v~~GDlIi 127 (187)
.+.+++|++|.......+.+|+ .+.-.+.+||++-
T Consensus 50 ~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G 85 (250)
T 3e6c_C 50 ITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIG 85 (250)
T ss_dssp CCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred CCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEe
Confidence 4679999999999887766554 5566789999974
No 209
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=50.20 E-value=48 Score=29.16 Aligned_cols=40 Identities=10% Similarity=0.009 Sum_probs=34.4
Q ss_pred EEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeee
Q 029842 97 RYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFT 137 (187)
Q Consensus 97 ~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~ 137 (187)
+.|++|.....-++.++ -....++|+|-..|-|-++|.|+
T Consensus 358 Y~v~~G~lTL~W~~~dG-t~~a~L~PDgSAwv~PFV~H~w~ 397 (443)
T 3g7d_A 358 YVVTEGRLTLEWDGPDG-PASVELEPDGSAWTGPFVRHRWH 397 (443)
T ss_dssp EEEEESCEEEEEEETTE-EEEEEECTTCEEEECTTCCEEEE
T ss_pred EEEecCceEEEecCCCC-ccceEECCCCceeeccccccccc
Confidence 55789988888875544 48999999999999999999999
No 210
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=49.91 E-value=33 Score=26.24 Aligned_cols=57 Identities=12% Similarity=-0.025 Sum_probs=36.1
Q ss_pred cceEEEEeeceEEEEEecCCC-cEEEEEEeCCCEEEeC---CCCe-eeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLP---AGIY-HRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d-~~~~~~v~~GDlIiIP---~g~~-H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|.......+.+| +.+.-.+.+||++=.. .+.. +.+++.......++++
T Consensus 61 ~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG~~~~~~~~~~~~~~~~A~~~~~v~~i 122 (232)
T 1zyb_A 61 CTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIEPQSLFGMNTNYASSYVAHTEVHTVCI 122 (232)
T ss_dssp CCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEECGGGGSSSCCBCSSEEEESSCEEEEEE
T ss_pred ccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeeeehHHhCCCCCCceEEEEccceEEEEE
Confidence 567999999999887654443 4666678999987322 2333 4444433344555555
No 211
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=49.61 E-value=39 Score=25.10 Aligned_cols=34 Identities=15% Similarity=0.037 Sum_probs=27.6
Q ss_pred cceEEEEeeceEEEEEecCCCc-EEEEEEeCCCEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLI 126 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~-~~~~~v~~GDlI 126 (187)
.+.+++|++|.......+.+++ .+.-.+.+||++
T Consensus 80 ~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 80 GDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAII 114 (187)
T ss_dssp CCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEE
T ss_pred CCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCee
Confidence 5689999999999888766664 556688999987
No 212
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=49.06 E-value=45 Score=25.19 Aligned_cols=57 Identities=12% Similarity=-0.014 Sum_probs=35.5
Q ss_pred cceEEEEeeceEEEEEecCCCc-EEEEEEeCCCEEEeCC---CCeeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVLPA---GIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~-~~~~~v~~GDlIiIP~---g~~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|.......+.+++ .+.-.+.+||++=..+ +.++.++.....+..++++
T Consensus 47 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~v~~i 107 (231)
T 3e97_A 47 GEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVGETAVLAHQERSASVRALTPVRTLML 107 (231)
T ss_dssp TTCEEEECSSEEEEEEECC--CEEEEEEEESSEEESTTTTTCCCCCCEEEEESSCEEEEEE
T ss_pred CCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEeeHHHhCCCCceEEEEECCcEEEEEE
Confidence 5679999999999887765554 5667889999874221 3344444433334444444
No 213
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=46.91 E-value=32 Score=27.86 Aligned_cols=57 Identities=11% Similarity=-0.112 Sum_probs=37.8
Q ss_pred cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEe---CCCCeeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVL---PAGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiI---P~g~~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|.......+.+++.+...+.+||++=- =.+.++.++.....+..++++
T Consensus 54 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~fGe~~l~~~~~~~~~v~A~~~~~~~~i 113 (333)
T 4ava_A 54 AVSFLLISSGSAEVSHVGDDGVAIIARALPGMIVGEIALLRDSPRSATVTTIEPLTGWTG 113 (333)
T ss_dssp CCCEEEEEECCEEEEEECTTCCEEEEEECTTCEESHHHHHHTCBCSSEEEESSCEEEEEE
T ss_pred CCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEeeHHHhcCCCCceEEEEEecCEEEEEE
Confidence 567999999999998877766667778899998721 123444444444444555544
No 214
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=46.76 E-value=16 Score=29.28 Aligned_cols=42 Identities=17% Similarity=0.247 Sum_probs=33.5
Q ss_pred EEEEeeceEEEEEecC--CCcEEEEEEeCCCEEEeCCCCeeeee
Q 029842 96 IRYCLEGSGYFDVRDE--SDQWIRIWIKAGDLIVLPAGIYHRFT 137 (187)
Q Consensus 96 i~yileG~g~f~i~~~--~d~~~~~~v~~GDlIiIP~g~~H~f~ 137 (187)
+..=|-+++.|.++.. ++..+.+.+..||+++.+....+|+-
T Consensus 134 ~svSLG~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r~~~H 177 (211)
T 3i3q_A 134 VSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYH 177 (211)
T ss_dssp EEEEEESCEEEEECCSSTTSCCEEEEECTTCEEEECGGGTTCCE
T ss_pred EEEECCCCeEEEEecccCCCceEEEECCCCCEEEECchHHceEe
Confidence 3445778999999864 46788999999999999998776543
No 215
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=44.81 E-value=34 Score=25.39 Aligned_cols=56 Identities=18% Similarity=0.195 Sum_probs=37.3
Q ss_pred ceEEEEeeceEEEEEecCCC-cEEEEEEeCCCEEEeC--CCCeeeeeeCCCCcEEEEEE
Q 029842 94 EEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLP--AGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 94 ~Ei~yileG~g~f~i~~~~d-~~~~~~v~~GDlIiIP--~g~~H~f~~~~~~~~~~ir~ 149 (187)
+.+++|++|.......+.+| +.+.-.+.+||++-.+ .+.++.+++..-.+..++++
T Consensus 26 ~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A~~~~~v~~i 84 (202)
T 2zcw_A 26 DRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEAATDVRLEPL 84 (202)
T ss_dssp CCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEESSCEEEEEC
T ss_pred CeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEEcccEEEEEE
Confidence 67899999999988765555 4556778999987431 13444444444445666666
No 216
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=44.15 E-value=17 Score=25.46 Aligned_cols=57 Identities=11% Similarity=-0.023 Sum_probs=33.8
Q ss_pred cceEEEEeeceEEEEEecCCC-cEEEEEEeCCCEEEeC---CCCe-eeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLP---AGIY-HRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d-~~~~~~v~~GDlIiIP---~g~~-H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|.......+.++ ..+...+.+||++=.. .+.. +.++.....+..++++
T Consensus 53 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~a~~~~~~~~i 114 (154)
T 2z69_A 53 AHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAVVPSQLFRF 114 (154)
T ss_dssp CCEEEEEEESCEEEECCCC-----CCEEECTTEEESGGGGGSSCSBCSSEEEESSSEEEEEE
T ss_pred cceEEEEEeCEEEEEEECCCCCEEEEEEccCCCeeccHhhccCCCCCceEEEEccceEEEEE
Confidence 567999999999988654443 3456678999987322 2223 4444433444555555
No 217
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=43.43 E-value=37 Score=25.27 Aligned_cols=54 Identities=11% Similarity=0.113 Sum_probs=32.9
Q ss_pred cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEe---CCCCeeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVL---PAGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiI---P~g~~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|...... .+++ ....+.+||++=- =.|.++.+++.......++++
T Consensus 112 ~~~ly~I~~G~v~~~~--~~g~-~~~~l~~G~~fGe~~~~~~~~~~~~~~a~~~~~l~~i 168 (198)
T 2ptm_A 112 GDRMFFIQQGIVDIIM--SDGV-IATSLSDGSYFGEICLLTRERRVASVKCETYCTLFSL 168 (198)
T ss_dssp CSEEEEEEECCEEEEC--TTSC-EEEEECTTCEESCHHHHHSSCCSSEEEESSCEEEEEE
T ss_pred CcEEEEEEeCEEEEEe--cCCe-EEEEecCCCEechHHHcCCCccceEEEEeeEEEEEEE
Confidence 5679999999998876 3344 5668899998621 123344444433334444444
No 218
>3r8s_R 50S ribosomal protein L21; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1vs8_R 1vs6_R 2aw4_R 2awb_R 1vt2_R 2i2v_R 2j28_R 2i2t_R* 2qao_R* 2qba_R* 2qbc_R* 2qbe_R 2qbg_R 2qbi_R* 2qbk_R* 2qov_R 2qox_R 2qoz_R* 2qp1_R* 2rdo_R ...
Probab=43.42 E-value=20 Score=25.76 Aligned_cols=22 Identities=14% Similarity=0.273 Sum_probs=18.2
Q ss_pred EEEEEecCCCcEEEEEEeCCCEEEeCC
Q 029842 104 GYFDVRDESDQWIRIWIKAGDLIVLPA 130 (187)
Q Consensus 104 g~f~i~~~~d~~~~~~v~~GDlIiIP~ 130 (187)
+.+.++|+ ++.|++||+|.|+.
T Consensus 3 AIi~~gGk-----QykV~~Gd~i~vek 24 (103)
T 3r8s_R 3 AVFQSGGK-----QHRVSEGQTVRLEK 24 (103)
T ss_dssp EEEECSSS-----EEEEETTCEEEESC
T ss_pred EEEEECCE-----EEEEeCCCEEEECC
Confidence 34667778 89999999999985
No 219
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=43.36 E-value=45 Score=25.70 Aligned_cols=34 Identities=12% Similarity=0.214 Sum_probs=27.4
Q ss_pred cceEEEEeeceEEEEEecCCC-cEEEEEEeCCCEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLI 126 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d-~~~~~~v~~GDlI 126 (187)
.+.+++|++|.......+.+| +.+.-.+.+||++
T Consensus 61 ~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~ 95 (243)
T 3la7_A 61 AERVYFLLKGAVKLSRVYEAGEEITVALLRENSVF 95 (243)
T ss_dssp CCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEE
T ss_pred CceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEE
Confidence 568999999999988766655 4566778999987
No 220
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=42.27 E-value=3 Score=29.96 Aligned_cols=24 Identities=33% Similarity=0.650 Sum_probs=20.0
Q ss_pred ceEEEEEecCCCcEEEEEEeCCCEEEeC
Q 029842 102 GSGYFDVRDESDQWIRIWIKAGDLIVLP 129 (187)
Q Consensus 102 G~g~f~i~~~~d~~~~~~v~~GDlIiIP 129 (187)
|+|...++|.. ...+++||+|+|=
T Consensus 41 GSG~I~lNGAA----Arl~~~GD~vII~ 64 (96)
T 1vc3_B 41 GSGVIGINGAA----AHLVKPGDLVILV 64 (96)
T ss_dssp TTTCEEEEGGG----GGTCCTTCEEEEE
T ss_pred CCCeEEEchHH----HccCCCCCEEEEE
Confidence 57999999965 6788999999874
No 221
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=42.15 E-value=28 Score=28.06 Aligned_cols=39 Identities=10% Similarity=0.252 Sum_probs=29.2
Q ss_pred cEEEEEEeCCCEEEeCCCCeeeeeeC--CC-CcEEEEEEEcC
Q 029842 114 QWIRIWIKAGDLIVLPAGIYHRFTLD--TS-NYVKLMRLFVG 152 (187)
Q Consensus 114 ~~~~~~v~~GDlIiIP~g~~H~f~~~--~~-~~~~~ir~f~~ 152 (187)
.++.+.+++||+|+.-+.+.|+.... +. .....+++...
T Consensus 226 ~~v~~~~~aGd~~~f~~~~~H~s~~N~s~~~R~~~~~~~~~~ 267 (291)
T 2opw_A 226 LFVPTPVQRGALVLIHGEVVHKSKQNLSDRSRQAYTFHLMEA 267 (291)
T ss_dssp GCEEECBCTTCEEEEETTCEEEECCBCSSSCCCEEEEEEEEC
T ss_pred CeeecccCCCcEEEEcCCceecCCCCCCCCceEEEEEEEEcC
Confidence 57899999999999999999997632 22 33455566554
No 222
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=41.44 E-value=43 Score=22.98 Aligned_cols=53 Identities=8% Similarity=0.018 Sum_probs=32.4
Q ss_pred cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeC---CCCeeeeee-CCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLP---AGIYHRFTL-DTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP---~g~~H~f~~-~~~~~~~~ir~ 149 (187)
.+.+++|++|...... .+++. ..+.+||++=.- .+.++.+++ .......++++
T Consensus 58 ~~~~y~i~~G~v~~~~--~~g~~--~~l~~G~~fG~~~~~~~~~~~~~~~~a~~~~~~~~i 114 (134)
T 2d93_A 58 LDSWYVILNGTVEISH--PDGKV--ENLFMGNSFGITPTLDKQYMHGIVRTKVDDCQFVCI 114 (134)
T ss_dssp ECEEEECCBSCEEEEC--SSSCE--EEECTTCEESCCSSSCCEECCSEEEESSSSEEEEEE
T ss_pred CCeEEEEEeCEEEEEc--CCCcE--EEecCCCccChhHhcCCCcceeEEEEEecceEEEEE
Confidence 4568999999998774 33333 558899987322 234444444 44445555555
No 223
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=41.17 E-value=20 Score=29.40 Aligned_cols=26 Identities=19% Similarity=0.280 Sum_probs=23.1
Q ss_pred cEEEEEEeCCCEEEeCCCCeeeeeeC
Q 029842 114 QWIRIWIKAGDLIVLPAGIYHRFTLD 139 (187)
Q Consensus 114 ~~~~~~v~~GDlIiIP~g~~H~f~~~ 139 (187)
.++.+.+++||+++.-+.+.|+-...
T Consensus 218 ~~v~~~~~aGd~v~f~~~l~H~s~~N 243 (313)
T 2fct_A 218 SAVPMQMKAGQFIIFWSTLMHASYPH 243 (313)
T ss_dssp GCEEECBCTTEEEEEETTSEEEECCB
T ss_pred ceeEeeeCCceEEEEeCCceeeCCCC
Confidence 57899999999999999999998643
No 224
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=40.17 E-value=40 Score=29.37 Aligned_cols=47 Identities=23% Similarity=0.270 Sum_probs=34.8
Q ss_pred cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCceEEeCCC
Q 029842 114 QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRP 162 (187)
Q Consensus 114 ~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~~gw~~~~r~ 162 (187)
.++++.-++||+|++-||.+|+.-+.+-+. +..+.-..+.|.++.+.
T Consensus 260 pv~~~vQ~pGEfViTfP~aYH~gfn~Gfn~--aEAvNFA~~~Wl~~g~~ 306 (354)
T 3dxt_A 260 PFNRITQEAGEFMVTFPYGYHAGFNHGFNC--AEAINFATPRWIDYGKM 306 (354)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEEESSSEE--EEEEEECCGGGHHHHHH
T ss_pred ceEEEEeCCCcEEEECCCceEEEeeccccH--hHhhccCcHHHHHhhhh
Confidence 466888899999999999999987766444 44444456779887543
No 225
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=39.72 E-value=3.6 Score=29.90 Aligned_cols=30 Identities=13% Similarity=0.320 Sum_probs=23.1
Q ss_pred EEEee--ceEEEEEecCCCcEEEEEEeCCCEEEeCC
Q 029842 97 RYCLE--GSGYFDVRDESDQWIRIWIKAGDLIVLPA 130 (187)
Q Consensus 97 ~yile--G~g~f~i~~~~d~~~~~~v~~GDlIiIP~ 130 (187)
-|++. |+|...++|.. ...+.+||+|+|=+
T Consensus 33 TYvI~GeGSG~I~lNGAA----Arl~~~GD~vII~a 64 (102)
T 3plx_B 33 TYTIATQEEGVVCLNGAA----ARLAEVGDKVIIMS 64 (102)
T ss_dssp EECEEESSTTCEEEEGGG----GGGCCTTCEEEEEE
T ss_pred EEEEEcCCCCEEEeCcHH----HhccCCCCEEEEEE
Confidence 35555 46889999975 67889999998864
No 226
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=39.37 E-value=33 Score=24.30 Aligned_cols=53 Identities=19% Similarity=0.201 Sum_probs=32.0
Q ss_pred cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCC---CCeeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPA---GIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~---g~~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|......++ +. ...+.+||++=--+ +.++.++.....+..++++
T Consensus 79 ~~~~y~i~~G~v~~~~~~---~~-~~~~~~G~~fGe~~~~~~~~~~~~v~A~~~~~~~~i 134 (154)
T 3pna_A 79 GDNFYVIDQGEMDVYVNN---EW-ATSVGEGGSFGELALIYGTPRAATVKAKTNVKLWGI 134 (154)
T ss_dssp CCEEEEEEESCEEEEETT---EE-EEEECTTCEECCHHHHHCCCCSSEEEESSCEEEEEE
T ss_pred CCeEEEEEecEEEEEECC---EE-EEEecCCCEeeehHhhcCCCcceEEEECcceEEEEE
Confidence 578999999999988743 33 45689999863211 3444444333333444444
No 227
>3v2d_V 50S ribosomal protein L21; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_P 2hgj_U 2hgq_U 2hgu_U 1vsa_P 2j03_V 2jl6_V 2jl8_V 2v47_V 2v49_V 2wdi_V 2wdj_V 2wdl_V 2wdn_V 2wh2_V 2wh4_V 2wrj_V 2wrl_V 2wro_V 2wrr_V ...
Probab=38.82 E-value=23 Score=25.34 Aligned_cols=22 Identities=5% Similarity=0.104 Sum_probs=18.2
Q ss_pred EEEEEecCCCcEEEEEEeCCCEEEeCC
Q 029842 104 GYFDVRDESDQWIRIWIKAGDLIVLPA 130 (187)
Q Consensus 104 g~f~i~~~~d~~~~~~v~~GDlIiIP~ 130 (187)
+.+.++|+ ++.|++||+|.|+.
T Consensus 3 AIi~~gGk-----QykV~~Gd~i~vek 24 (101)
T 3v2d_V 3 AIVKTGGK-----QYRVEPGLKLRVEK 24 (101)
T ss_dssp EEEEETTE-----EEEECTTCEEEESC
T ss_pred EEEEeCCE-----EEEEeCCCEEEECC
Confidence 34667777 89999999999985
No 228
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=38.38 E-value=4.6 Score=29.83 Aligned_cols=30 Identities=13% Similarity=0.261 Sum_probs=22.7
Q ss_pred EEEee---ceEEEEEecCCCcEEEEEEeCCCEEEeCC
Q 029842 97 RYCLE---GSGYFDVRDESDQWIRIWIKAGDLIVLPA 130 (187)
Q Consensus 97 ~yile---G~g~f~i~~~~d~~~~~~v~~GDlIiIP~ 130 (187)
-|++. |+|...++|.. ...+.+||.|||=+
T Consensus 60 TYvI~GerGSg~I~lNGAA----Ar~~~~GD~vII~a 92 (114)
T 3oug_A 60 TYVIKGEPNSKTIALNGPA----ARRCEIGDQLFIIS 92 (114)
T ss_dssp EEEEEECTTSCCEEEEGGG----GGGCCTTCEEEEEE
T ss_pred EEEEEccCCCCEEEeCCHH----HhccCCCCEEEEEE
Confidence 35554 57899999965 67789999998743
No 229
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=37.96 E-value=33 Score=25.66 Aligned_cols=53 Identities=9% Similarity=0.160 Sum_probs=32.3
Q ss_pred cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEe---CCCCeeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVL---PAGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiI---P~g~~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|....... ++. ...+.+||++=- =.|.++.+++.......++++
T Consensus 113 ~~~ly~I~~G~v~v~~~--~g~--~~~l~~G~~fGe~~~~~~~~~~~~v~a~~~~~l~~i 168 (202)
T 3bpz_A 113 GKKMYFIQHGVVSVLTK--GNK--EMKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSL 168 (202)
T ss_dssp CCEEEEEEECEEEEECT--TSC--CEEEETTCEECHHHHHHCSBCSSEEEESSCEEEEEE
T ss_pred CCeEEEEeccEEEEEEC--CCe--EEEEcCCCEeccHHHhcCCCcccEEEEeeEEEEEEE
Confidence 46799999999987643 333 246899998721 123444444444444555555
No 230
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=37.88 E-value=39 Score=25.55 Aligned_cols=57 Identities=16% Similarity=0.077 Sum_probs=34.1
Q ss_pred cceEEEEeeceEEEEEecCCC-cEEEEEEeCCCEEEeC---CCCeeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLP---AGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d-~~~~~~v~~GDlIiIP---~g~~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|.......+.++ ..+.-.+.+||++=.. .+.++.+++....+..++++
T Consensus 51 ~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~~~~~v~~i 111 (232)
T 2gau_A 51 PNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFGMRPYFAEETCSSTAIAVENSKVLAI 111 (232)
T ss_dssp CCEEEEEEESCEEEEC-----CCCEEEEECTTCEESHHHHHHTSCCSSEEEESSCEEEEEE
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEeeeehhhCCCCcceEEEEecceEEEEE
Confidence 567999999999887654433 4566788999987322 13444444444444555555
No 231
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=37.56 E-value=1.2e+02 Score=24.66 Aligned_cols=57 Identities=16% Similarity=0.215 Sum_probs=37.8
Q ss_pred CcccccccCcceEEEEeeceE-EEEEecCCC----------------------------cEEEEEEe----CCCE--EEe
Q 029842 84 NFYTEHIHADEEIRYCLEGSG-YFDVRDESD----------------------------QWIRIWIK----AGDL--IVL 128 (187)
Q Consensus 84 ~~~~eH~H~~~Ei~yileG~g-~f~i~~~~d----------------------------~~~~~~v~----~GDl--IiI 128 (187)
.+..+|.-..+|+.+...|.. .+.+-+.++ ..-.+.+. +|+. ++|
T Consensus 71 ~~S~~HRv~sdEiW~~h~G~pL~l~li~~dG~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~LG~d~~~Ge~pQ~vV 150 (225)
T 3m3i_A 71 SPSHLHRLCSDETWMYHAGDPLQLHVILKDPQDEDRIAAQPPAAPQAETDTADARPKYQVYRRVLVGARVERGELLQYTV 150 (225)
T ss_dssp SCEEEEECSSEEEEEEEEESCEEEEEEESSSTTTTC------------------CCSSCEEEEEEESSCGGGTCBSEEEE
T ss_pred CCcccEEecCCEEEEEECCCCEEEEEEcCCCcccccccccccccccccccccccccccCceEEEEeCCCccCCceeEEEe
Confidence 344455557899999999997 454443444 34556664 4663 789
Q ss_pred CCCCeeeeeeCC
Q 029842 129 PAGIYHRFTLDT 140 (187)
Q Consensus 129 P~g~~H~f~~~~ 140 (187)
|+|+.......+
T Consensus 151 P~G~WqaA~~~~ 162 (225)
T 3m3i_A 151 PGGAIFGSSVAA 162 (225)
T ss_dssp CTTCEEEEECCS
T ss_pred CCCEEEEEEECC
Confidence 999977766443
No 232
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=37.44 E-value=44 Score=29.34 Aligned_cols=45 Identities=16% Similarity=0.224 Sum_probs=33.7
Q ss_pred cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCceEEeC
Q 029842 114 QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYN 160 (187)
Q Consensus 114 ~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~~gw~~~~ 160 (187)
.++++.-++||+|++-||.+|+--+.+-+.-.++.| ..+-|.++.
T Consensus 278 pv~r~vQ~pGEfViTfP~aYH~gfn~GfN~aEAvNF--A~~~Wl~~g 322 (381)
T 2ox0_A 278 PFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNF--ATRRWIEYG 322 (381)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEEECSSEEEEEEEE--CCTTHHHHH
T ss_pred ceEEEEecCCCEEEECCCcEEEeecCcccHHHHhcc--CcHHHHHHh
Confidence 466888899999999999999987766555555554 556676653
No 233
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=36.66 E-value=70 Score=25.02 Aligned_cols=34 Identities=21% Similarity=0.108 Sum_probs=26.6
Q ss_pred cceEEEEeeceEEEEEecCCC--cEEEEEEeCCCEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESD--QWIRIWIKAGDLI 126 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d--~~~~~~v~~GDlI 126 (187)
.+.+++|++|+........++ ......+.+||++
T Consensus 198 ~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 198 GDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYF 233 (291)
T ss_dssp CCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEE
T ss_pred CCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEe
Confidence 567999999999988764443 3567788999987
No 234
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=35.37 E-value=72 Score=25.19 Aligned_cols=57 Identities=11% Similarity=0.043 Sum_probs=37.4
Q ss_pred cceEEEEeeceEEEEEec-CCC-cEEEEEEeCCCEEE---eCCCCeeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRD-ESD-QWIRIWIKAGDLIV---LPAGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~-~~d-~~~~~~v~~GDlIi---IP~g~~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|+......+ .++ ......+.+||++= +=.+.+..++........++.+
T Consensus 198 ~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~i 259 (299)
T 3shr_A 198 GDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWFGEKALQGEDVRTANVIAAEAVTCLVI 259 (299)
T ss_dssp ECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEECGGGGSSSEECSSEEEESSSEEEEEE
T ss_pred CCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEeChHHHhCCCCcceEEEECCCEEEEEE
Confidence 467899999999988875 233 45667899999873 1124444555444445555555
No 235
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=35.26 E-value=22 Score=30.59 Aligned_cols=38 Identities=11% Similarity=0.130 Sum_probs=32.4
Q ss_pred EEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCee
Q 029842 97 RYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYH 134 (187)
Q Consensus 97 ~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H 134 (187)
..=|-+.+.|.++..++..+.+.+.+||+++++....+
T Consensus 227 slSLG~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~ 264 (345)
T 3tht_A 227 SLSLGSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRY 264 (345)
T ss_dssp EEEESSCEEEEEECTTSCEEEEEECTTEEEEECTHHHH
T ss_pred EEECCCceeEEEccCCCceEEEEcCCCcEEEEChHHhh
Confidence 34467899999998777899999999999999998664
No 236
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=34.91 E-value=1.5e+02 Score=22.63 Aligned_cols=57 Identities=11% Similarity=0.103 Sum_probs=39.3
Q ss_pred cCccccccc-CcceEEEEeeceE-EEEEecCCCcEEEEEEe----CCCE--EEeCCCCeeeeeeC
Q 029842 83 KNFYTEHIH-ADEEIRYCLEGSG-YFDVRDESDQWIRIWIK----AGDL--IVLPAGIYHRFTLD 139 (187)
Q Consensus 83 ~~~~~eH~H-~~~Ei~yileG~g-~f~i~~~~d~~~~~~v~----~GDl--IiIP~g~~H~f~~~ 139 (187)
+.+...|.= +.+||.+...|.. .+.+-..++..-++.+. +|+. ++||+|+.......
T Consensus 50 g~~S~wHRv~~sdEiW~~h~G~pL~l~~~~~dg~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~ 114 (154)
T 1znp_A 50 GVRSHWHRVTDAVEVWHYYAGAPIALHLSQDGREVQTFTLGPAILEGERPQVIVPANCWQSAESL 114 (154)
T ss_dssp SCCEEEEEETTSCEEEEEEEESCEEEEEESSSSCCEEEEESSCTTTTEESEEEECTTCEEEEEES
T ss_pred CCCCcceeccCCCEEEEeECCCCEEEEEEcCCCcEEEEEeCCCcccCcccEEEEcCCEEEEeeEC
Confidence 345667775 7899999999984 34444444555456564 4654 89999998887654
No 237
>2c45_A Aspartate 1-decarboxylase precursor; double-PSI beta barrel, lyase, zymogen, pantothenate biosynthesis, pyruvate; 2.99A {Mycobacterium tuberculosis}
Probab=32.83 E-value=6 Score=30.21 Aligned_cols=26 Identities=31% Similarity=0.537 Sum_probs=21.3
Q ss_pred ceEEEEEecCCCcEEEEEEeCCCEEEeCCC
Q 029842 102 GSGYFDVRDESDQWIRIWIKAGDLIVLPAG 131 (187)
Q Consensus 102 G~g~f~i~~~~d~~~~~~v~~GDlIiIP~g 131 (187)
|+|...++|.. ...+++||+|||=+-
T Consensus 65 GSG~I~lNGAA----Arl~~~GD~vII~aY 90 (139)
T 2c45_A 65 GSGVIGINGAA----AHLVHPGDLVILIAY 90 (139)
T ss_dssp TTTCEEEESST----TTTSCTTCEEEEEEC
T ss_pred CCCEEEEchHH----HccCCCCCEEEEEEC
Confidence 57999999975 677899999988653
No 238
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=32.52 E-value=50 Score=22.75 Aligned_cols=53 Identities=13% Similarity=-0.024 Sum_probs=32.4
Q ss_pred cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeC---CCCeeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLP---AGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP---~g~~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|......+ +. ....+.+||++=-- .+.++.++.....+..++++
T Consensus 64 ~~~~y~i~~G~v~~~~~---g~-~~~~~~~G~~fGe~~~l~~~~~~~~~~a~~~~~v~~i 119 (139)
T 3ocp_A 64 GSLVYVMEDGKVEVTKE---GV-KLCTMGPGKVFGELAILYNCTRTATVKTLVNVKLWAI 119 (139)
T ss_dssp CCEEEEEEECCEEEEET---TE-EEEEECTTCEESCHHHHHCCCCSSEEEESSCEEEEEE
T ss_pred CCEEEEEEeCEEEEEEC---CE-EEEEeCCCCEeccHHHHCCCCcceEEEECcceEEEEE
Confidence 57899999999998543 33 45678999986321 23444444433334455444
No 239
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=32.43 E-value=90 Score=26.48 Aligned_cols=57 Identities=18% Similarity=0.092 Sum_probs=38.7
Q ss_pred cceEEEEeeceEEEEEecCCCc---EEEEEEeCCCEEEeCC--CCeeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQ---WIRIWIKAGDLIVLPA--GIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~---~~~~~v~~GDlIiIP~--g~~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|.......+.++. .+...+.+||++=-.+ +.++..+........++++
T Consensus 83 ~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe~~l~~~~~~~tv~A~~~~~l~~i 144 (469)
T 1o7f_A 83 GTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGESILDNTPRHATIVTRESSELLRI 144 (469)
T ss_dssp CCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECGGGGGTCBCSSEEEESSSEEEEEE
T ss_pred CCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcchhhhCCCCccceEEEccceeEEEE
Confidence 5679999999999988766553 6777899999874333 3444444444445555555
No 240
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=32.30 E-value=10 Score=26.35 Aligned_cols=33 Identities=15% Similarity=0.175 Sum_probs=22.3
Q ss_pred cceEEEEeeceEEEEEecCCCc-EEEE--EEeCCCEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQ-WIRI--WIKAGDLI 126 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~-~~~~--~v~~GDlI 126 (187)
.+.+++|++|...+... .+++ .+.. .+.+||++
T Consensus 47 ~~~~y~i~~G~v~~~~~-~~g~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 47 VNEMLFIIRGRLESVTT-DGGRSGFYNRSLLKEGDFC 82 (137)
T ss_dssp CSEEEEEEECCCEEECC-SSCSSSSSCEEECCTTCBS
T ss_pred CCeEEEEEeeEEEEEEc-CCCcceeeeeeeecCCCEe
Confidence 46799999999996533 3333 2222 78899975
No 241
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=31.94 E-value=5.3 Score=30.63 Aligned_cols=30 Identities=20% Similarity=0.495 Sum_probs=22.8
Q ss_pred EEEee---ceEEEEEecCCCcEEEEEEeCCCEEEeCC
Q 029842 97 RYCLE---GSGYFDVRDESDQWIRIWIKAGDLIVLPA 130 (187)
Q Consensus 97 ~yile---G~g~f~i~~~~d~~~~~~v~~GDlIiIP~ 130 (187)
-|++. |+|...++|.. .-.+++||+|||=+
T Consensus 74 TYvI~GerGSG~I~lNGAA----Arl~~~GD~VII~s 106 (143)
T 1pqh_A 74 TYAIAAERGSRIISVNGAA----AHCASVGDIVIIAS 106 (143)
T ss_dssp EEEEEECTTCCCEECCGGG----GGTCCTTCEEEEEE
T ss_pred EEEEEccCCCceEEechHH----HccCCCCCEEEEEE
Confidence 35554 57999999965 67789999999743
No 242
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=31.32 E-value=42 Score=28.35 Aligned_cols=42 Identities=17% Similarity=0.203 Sum_probs=32.6
Q ss_pred eceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCC-CcEEEE
Q 029842 101 EGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS-NYVKLM 147 (187)
Q Consensus 101 eG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~-~~~~~i 147 (187)
.-.+.|.++|+ .+.+.+|+..++-...+|+..+.++ .++-.+
T Consensus 130 np~~~f~vdg~-----~~~m~~GE~w~~d~~~~H~v~N~g~~~RIhLv 172 (290)
T 1e5r_A 130 SPLAFHSNEDT-----VIHMRPGEIWFLDAATVHSAVNFSEISRQSLC 172 (290)
T ss_dssp CTTEEEEETTE-----EECCCTTEEEECCTTSCEEEEESSSSCCCEEE
T ss_pred CCCcEEEECCE-----EEecCCCCEEEEcCCCeeEEEcCCCCCeEEEE
Confidence 44566667777 8999999999999999999988554 554443
No 243
>1s4c_A Protein HI0227; double-stranded beta-helix, structural genomics, unknown function, structural genomics, unknown function; 2.20A {Haemophilus influenzae} SCOP: b.82.2.7 PDB: 1jop_A
Probab=31.28 E-value=61 Score=24.20 Aligned_cols=52 Identities=13% Similarity=0.121 Sum_probs=36.1
Q ss_pred ccccC-cceEEEEeeceEEEEEecC-------------CCc--------EEEEEEeCCCEEEeCCCCeeeeeeC
Q 029842 88 EHIHA-DEEIRYCLEGSGYFDVRDE-------------SDQ--------WIRIWIKAGDLIVLPAGIYHRFTLD 139 (187)
Q Consensus 88 eH~H~-~~Ei~yileG~g~f~i~~~-------------~d~--------~~~~~v~~GDlIiIP~g~~H~f~~~ 139 (187)
.-.|. +--|-|+|+|+=.+.+... .|. --.+.+.+|+++++-|+-.|+....
T Consensus 62 ~E~Hr~YiDIq~~l~G~E~i~~~~~~~~~~~~~~y~~e~D~~~~~~~~~~~~v~l~~G~FaiFfP~d~H~p~~~ 135 (155)
T 1s4c_A 62 AELHHEYLDVQVLIRGTENIEVGATYPNLSKYEDYNEADDYQLCADIDDKFTVTMKPKMFAVFYPYEPHKPCCV 135 (155)
T ss_dssp EEECSSEEEEEEEEESCEEEEECCSCCCGGGSCCCBTTTTBEEESCCTTCEEEEECTTEEEEECTTCCEEEEEC
T ss_pred cccccceEEEEecceeeEEEEEEecccCcccCCCCCcCCCEEecCCCCccEEEEeCCCEEEEECCCcccccccc
Confidence 34453 6678888899766655421 111 1247889999999999999998664
No 244
>2qfe_A Calpain-7; C2-like domain, hydrolase, nuclear protein, protease, thiol protease; 1.45A {Homo sapiens}
Probab=30.86 E-value=32 Score=25.86 Aligned_cols=33 Identities=15% Similarity=0.171 Sum_probs=22.8
Q ss_pred EEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCC
Q 029842 117 RIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEP 154 (187)
Q Consensus 117 ~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~~~~ 154 (187)
+..+.||..+|||. .|..+.+..| +||+|+..+
T Consensus 109 ~~~L~pG~YvIVPS----Tf~P~~eg~F-~LrVfs~~~ 141 (148)
T 2qfe_A 109 LENIPSGIFNIIPS----TFLPKQEGPF-FLDFNSIIP 141 (148)
T ss_dssp EEEECSEEEEEEEE----ESSTTCCEEE-EEEEEESSC
T ss_pred EEEcCCCCEEEEec----cCCCCCccce-EEEEEeCCC
Confidence 57788899998873 4455555454 468898865
No 245
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=30.19 E-value=18 Score=30.35 Aligned_cols=28 Identities=18% Similarity=0.217 Sum_probs=22.6
Q ss_pred CcEEEEEEeCCCEEEeCCCCeeeeeeCC
Q 029842 113 DQWIRIWIKAGDLIVLPAGIYHRFTLDT 140 (187)
Q Consensus 113 d~~~~~~v~~GDlIiIP~g~~H~f~~~~ 140 (187)
..++.+.++|||+|+.-..+.|......
T Consensus 219 ~~~v~~~~~aGd~v~f~~~~~H~s~~N~ 246 (319)
T 3gja_A 219 SQAYPMVLKPGEAVIFWSNTMHASLPHT 246 (319)
T ss_dssp --CCBCCBCTTEEEEEETTSCEEECCCC
T ss_pred CceeEeeECCCeEEEEcCCccccCCCCC
Confidence 3567889999999999999999976443
No 246
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=29.84 E-value=1.2e+02 Score=24.82 Aligned_cols=43 Identities=9% Similarity=0.063 Sum_probs=28.3
Q ss_pred eEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCC
Q 029842 95 EIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS 141 (187)
Q Consensus 95 Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~ 141 (187)
=..|+++|++.+. +.++. ...+.+||.+.+-.+..=.+++.++
T Consensus 204 ~~l~v~~G~v~v~--g~~~~--~~~l~~gd~~~l~~~~~l~l~a~~~ 246 (256)
T 2vec_A 204 AYLQSIHGKFHAL--THHEE--KAALTCGDGAFIRDEANITLVADSP 246 (256)
T ss_dssp EEEEEEESCEEEE--ETTEE--EEEECTTCEEEEESCSEEEEEESSS
T ss_pred EEEEEEECEEEEC--Ccccc--ceEECCCCEEEECCCCeEEEEeCCC
Confidence 5678889988664 31100 3568999999998766545555443
No 247
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=29.43 E-value=74 Score=21.90 Aligned_cols=54 Identities=11% Similarity=0.140 Sum_probs=37.0
Q ss_pred HHHHhhcCeEEEEcCCCCCCChHHH-HHHHHHcCCCeeeeeeeCcccccCHHHHh
Q 029842 29 LDQLAELGVLYWRLNPKNYENDEEL-QKIREARGYSYMDLLDLCPEKVTNYEEKL 82 (187)
Q Consensus 29 ~~~L~~~GV~~w~~~~~~~~~~~~l-~~l~~~~Gy~~~dvv~v~~~~~p~~~~~~ 82 (187)
...|.+.||.|-.++.+...+...+ +.|++..|..+.=++.+..+.++.++...
T Consensus 34 k~~L~~~~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi~g~~igG~d~l~ 88 (114)
T 3h8q_A 34 KELFSSLGVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFVNKVHVGGCDQTF 88 (114)
T ss_dssp HHHHHHTTCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEETTEEEESHHHHH
T ss_pred HHHHHHcCCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEECCEEEeCHHHHH
Confidence 4678888999866665543334455 45767788888878888877777666543
No 248
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=29.03 E-value=24 Score=22.72 Aligned_cols=12 Identities=17% Similarity=0.562 Sum_probs=7.3
Q ss_pred EEEEeCCCEEEe
Q 029842 117 RIWIKAGDLIVL 128 (187)
Q Consensus 117 ~~~v~~GDlIiI 128 (187)
.+.+++||+|.|
T Consensus 22 ELs~~~Gd~i~v 33 (65)
T 2lj0_A 22 ELELRDGDIVDV 33 (65)
T ss_dssp BCCBCTTCEEEE
T ss_pred CcCCCCCCEEEE
Confidence 456666666654
No 249
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=28.66 E-value=1e+02 Score=19.82 Aligned_cols=53 Identities=11% Similarity=0.035 Sum_probs=35.2
Q ss_pred HHHHhhcCeEEEEcCCCCC---CChHHHHHHHHHcCCC-----eeeeeee-CcccccCHHHH
Q 029842 29 LDQLAELGVLYWRLNPKNY---ENDEELQKIREARGYS-----YMDLLDL-CPEKVTNYEEK 81 (187)
Q Consensus 29 ~~~L~~~GV~~w~~~~~~~---~~~~~l~~l~~~~Gy~-----~~dvv~v-~~~~~p~~~~~ 81 (187)
...|.+.||.|-.++.+.. .+....+.|++..|+. +.=+|.+ ..+.++.|++.
T Consensus 21 k~~L~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i~~g~~igG~d~l 82 (87)
T 1aba_A 21 KRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFAPDGSHIGGFDQL 82 (87)
T ss_dssp HHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEECTTSCEEESHHHH
T ss_pred HHHHHHcCCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEEECCEEEeCHHHH
Confidence 4678899999966665532 1234456677778887 6677777 65556666654
No 250
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=28.64 E-value=1.5e+02 Score=23.83 Aligned_cols=38 Identities=8% Similarity=-0.011 Sum_probs=26.8
Q ss_pred eEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCC
Q 029842 95 EIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS 141 (187)
Q Consensus 95 Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~ 141 (187)
=..|+++|++.+ ++ ..+.+||++.+..+..=.+++.++
T Consensus 183 ~~~~v~~G~v~v--~g-------~~l~~gd~~~~~~~~~l~l~a~~~ 220 (242)
T 1tq5_A 183 VWIQVVKGNVTI--NG-------VKASTSDGLAIWDEQAISIHADSD 220 (242)
T ss_dssp EEEEEEESEEEE--TT-------EEEETTCEEEEESCSCEEEEESSS
T ss_pred EEEEEccCcEEE--CC-------EEeCCCCEEEECCCCeEEEEeCCC
Confidence 457889998765 32 358899999998776555666443
No 251
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=28.58 E-value=1e+02 Score=26.41 Aligned_cols=35 Identities=6% Similarity=-0.198 Sum_probs=26.1
Q ss_pred cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIV 127 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIi 127 (187)
.+.+++|++|.........+.......+.+||++=
T Consensus 186 ~d~~YiI~sG~v~v~~~~~G~~~~v~~l~~G~~fG 220 (416)
T 3tnp_B 186 GDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSFG 220 (416)
T ss_dssp CCEEEEEEECEEEEEEECSSCEEEEEEEESCCEEC
T ss_pred CceEEEEEeeEEEEEEecCCCEEEEEEecCCCEEe
Confidence 47899999999998885333345566789999763
No 252
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=27.92 E-value=1.5e+02 Score=20.44 Aligned_cols=53 Identities=13% Similarity=0.083 Sum_probs=34.2
Q ss_pred cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCC---C--CeeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPA---G--IYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~---g--~~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|.......+ .....+.+||++=-.+ + .++.++.....+..++++
T Consensus 68 ~~~~y~i~~G~v~~~~~~----~~~~~~~~G~~fG~~~~~~~~~~~~~~~~~a~~~~~v~~i 125 (160)
T 4f8a_A 68 VDSLCFVVSGSLEVIQDD----EVVAILGKGDVFGDVFWKEATLAQSCANVRALTYCDLHVI 125 (160)
T ss_dssp CCEEEEEEESEEEEEETT----EEEEEEETTCEEECCTTTCSSCCBCSSEEEESSCEEEEEE
T ss_pred ccEEEEEEeeEEEEEECC----EEEEEecCCCEeCcHHHhcCcccceEEEEEECCceEEEEE
Confidence 578999999999987632 3466789999986432 2 344444444444555554
No 253
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=27.55 E-value=55 Score=22.29 Aligned_cols=51 Identities=18% Similarity=0.247 Sum_probs=31.3
Q ss_pred cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeC---CCCeeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLP---AGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP---~g~~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|.......+ ...+.+||++=.- .+.++.++.....+..++++
T Consensus 52 ~~~~y~i~~G~v~~~~~~------~~~~~~G~~~G~~~~~~~~~~~~~~~a~~~~~~~~i 105 (138)
T 1vp6_A 52 GDRMFFVVEGSVSVATPN------PVELGPGAFFGEMALISGEPRSATVSAATTVSLLSL 105 (138)
T ss_dssp CCEEEEEEESCEEECSSS------CEEECTTCEECHHHHHHCCCCSSCEEESSSEEEEEE
T ss_pred cceEEEEEeeEEEEEeCC------cceECCCCEeeehHhccCCCceeEEEECCCEEEEEE
Confidence 567999999999887653 2578999986321 23333444333334555554
No 254
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=26.95 E-value=1.6e+02 Score=21.87 Aligned_cols=53 Identities=17% Similarity=0.128 Sum_probs=34.3
Q ss_pred cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCC---CC--eeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPA---GI--YHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~---g~--~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|......++ .+...+.+||++=-.+ +. ++.+++....+..++++
T Consensus 116 ~~~ly~I~~G~v~v~~~~----~~~~~l~~G~~fGe~~~~~~~~~~~~~~v~a~~~~~l~~i 173 (212)
T 3ukn_A 116 LQAIYFVCSGSMEVLKDN----TVLAILGKGDLIGSDSLTKEQVIKTNANVKALTYCDLQYI 173 (212)
T ss_dssp CCEEEEEEECCEEEESSS----CEEEEECTTCEEECSCCSSSSCCBBCSEEEESSCEEEEEE
T ss_pred ccEEEEEEecEEEEEECC----eEEEEecCCCCcCcHHhccCCCCCcceEEEEcccEEEEEE
Confidence 578999999999888643 3456789999875322 22 44455444444555554
No 255
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=26.95 E-value=69 Score=25.70 Aligned_cols=38 Identities=13% Similarity=0.348 Sum_probs=31.0
Q ss_pred EEEeeceEEEEEecCC----------CcEEEEEEeCCCEEEeCCCCee
Q 029842 97 RYCLEGSGYFDVRDES----------DQWIRIWIKAGDLIVLPAGIYH 134 (187)
Q Consensus 97 ~yileG~g~f~i~~~~----------d~~~~~~v~~GDlIiIP~g~~H 134 (187)
..=|-+.+.|.++... +..+.+.+..||++++......
T Consensus 158 slSLG~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~G~~r~ 205 (238)
T 2iuw_A 158 SLSFGATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIMEGATQA 205 (238)
T ss_dssp EEEEESCEEEEEEECCC--------CCCEEEEEECTTCEEEEEETHHH
T ss_pred EEECCCCEEEEEeccCCccccCcccCCceEEEEcCCCCEEEEChhhhC
Confidence 4446799999998754 3689999999999999998753
No 256
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=26.72 E-value=92 Score=26.22 Aligned_cols=42 Identities=19% Similarity=0.098 Sum_probs=33.3
Q ss_pred cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCe-eeeeeC
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIY-HRFTLD 139 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~-H~f~~~ 139 (187)
.+-....+.|.|...++++ .+.+.+-|.+.||.|.. -.|...
T Consensus 79 rE~~iV~l~G~~~V~vdG~-----~f~lg~~dalYVp~g~~~v~~as~ 121 (282)
T 1xru_A 79 RELGVINIGGAGTITVDGQ-----CYEIGHRDALYVGKGAKEVVFASI 121 (282)
T ss_dssp EEEEEEECSSCEEEEETTE-----EEEECTTCEEEECTTCCCEEEEES
T ss_pred cEEEEEEccCeEEEEECCE-----EEecCCCCEEEeCCCCeEEEEEec
Confidence 3445566899999999887 77899999999999996 455543
No 257
>2fi9_A Outer membrane protein; bartonella hense protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bartonella henselae} SCOP: c.103.1.1
Probab=26.65 E-value=26 Score=25.78 Aligned_cols=27 Identities=37% Similarity=0.624 Sum_probs=21.0
Q ss_pred ceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeee
Q 029842 102 GSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRF 136 (187)
Q Consensus 102 G~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f 136 (187)
|.|.|.|++. .+. |++|+.|.|+..|-
T Consensus 22 ~~g~f~i~g~-----~~~---g~i~v~p~~~~~W~ 48 (128)
T 2fi9_A 22 GNGGFRFADM-----SHR---GSIICIPSGIYGID 48 (128)
T ss_dssp ETTEEEETTE-----EEE---SEEEEETTEEEEEC
T ss_pred cCCEEEECCE-----EEE---eCEEEeCCCeeccC
Confidence 6677888765 443 99999999997774
No 258
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=26.49 E-value=85 Score=23.58 Aligned_cols=31 Identities=13% Similarity=0.078 Sum_probs=23.7
Q ss_pred cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLI 126 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlI 126 (187)
.+.+++|++|+......+.+ ....+.+||++
T Consensus 166 ~~~~y~I~~G~v~v~~~~~~---~~~~l~~g~~f 196 (246)
T 3of1_A 166 GENFYLIEYGAVDVSKKGQG---VINKLKDHDYF 196 (246)
T ss_dssp CCEEEEEEECEEEEEETTTE---EEEEEETTCEE
T ss_pred CCEEEEEEecEEEEEEcCCc---eEEEcCCCCcc
Confidence 56789999999988766432 46778999987
No 259
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=26.22 E-value=1e+02 Score=25.42 Aligned_cols=51 Identities=33% Similarity=0.496 Sum_probs=31.7
Q ss_pred ceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCC-C----CeeeeeeCCCCcEEEEEEEcCCC
Q 029842 94 EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPA-G----IYHRFTLDTSNYVKLMRLFVGEP 154 (187)
Q Consensus 94 ~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~-g----~~H~f~~~~~~~~~~ir~f~~~~ 154 (187)
.=..|+++|++.+ ++. ...+.+||++.+.. | ..=.+++.+ ...+ -++..+|
T Consensus 189 ~~~lyv~~G~v~v--~g~-----~~~l~~~d~~~~~~~~~~~~~~l~l~a~~--~a~~-Ll~~G~P 244 (277)
T 2p17_A 189 NGFLYILEGSGVF--GAD-----NIEGKAGQALFFSRHNRGEETELNVTARE--KLRL-LLYAGEP 244 (277)
T ss_dssp EEEEEEEESEEEE--TTT-----TEEEETTEEEEECCCCTTCEEEEEEEESS--SEEE-EEEEECC
T ss_pred EEEEEEEeCeEEE--CCC-----ceEeCCCcEEEEcCCCCCccceEEEEeCC--CcEE-EEEeccc
Confidence 3568999998654 442 24689999999986 6 433455544 3333 3455443
No 260
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=25.80 E-value=1.6e+02 Score=24.76 Aligned_cols=41 Identities=17% Similarity=0.201 Sum_probs=33.2
Q ss_pred cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCe-eeeee
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIY-HRFTL 138 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~-H~f~~ 138 (187)
.+-....|.|.|...++++ .+.+.+.|.+.||.|.. -.|.+
T Consensus 79 rE~~iV~lgG~~~V~vdg~-----~f~lg~~dalYVp~G~~~v~~as 120 (289)
T 1ywk_A 79 RELGVINIGGPGFIEIDGA-----KETMKKQDGYYIGKETKHVRFSS 120 (289)
T ss_dssp EEEEEEECSSCEEEEETTE-----EEEECTTCEEEECTTCCCEEEEE
T ss_pred cEEEEEEccCeEEEEECCE-----EEecCCCCEEEeCCCCeEEEEEe
Confidence 3455666899999999887 77899999999999977 55654
No 261
>2fvt_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: c.103.1.1
Probab=25.34 E-value=26 Score=26.18 Aligned_cols=27 Identities=26% Similarity=0.421 Sum_probs=20.7
Q ss_pred ceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeee
Q 029842 102 GSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRF 136 (187)
Q Consensus 102 G~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f 136 (187)
|.|.|.|++. .+ .|++|+.|.|+..|-
T Consensus 20 ~~g~f~ing~-----~~---~gsilv~p~~~~~W~ 46 (135)
T 2fvt_A 20 GKGGFYFAGM-----SH---QGSLLFLPDAVWGWD 46 (135)
T ss_dssp ETTEEECSSS-----EE---CSEEEECSSCEEEES
T ss_pred cCCEEEECCE-----EE---EeCEEEeCCCccccC
Confidence 5667888765 44 499999999997774
No 262
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=25.09 E-value=65 Score=24.25 Aligned_cols=54 Identities=15% Similarity=-0.046 Sum_probs=33.5
Q ss_pred CcceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEe---CCCCeeeeeeCCCCcEEEEEE
Q 029842 92 ADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVL---PAGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 92 ~~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiI---P~g~~H~f~~~~~~~~~~ir~ 149 (187)
..+.+++|++|......++. . ...+.+||++=- =.+.++..+.....+..++++
T Consensus 47 ~~~~~y~i~~G~v~v~~~~~---~-~~~~~~g~~fGe~~l~~~~~~~~tv~a~~~~~~~~i 103 (246)
T 3of1_A 47 QGDYFYVVEKGTVDFYVNDN---K-VNSSGPGSSFGELALMYNSPRAATVVATSDCLLWAL 103 (246)
T ss_dssp CCCEEEEEEECCEEEESTTS---C-CEEECTTCEECHHHHHHTCCCSSEEEESSCEEEEEE
T ss_pred CCCEEEEEEeeEEEEEECCE---E-EEecCCCCeeehhHHhcCCCCCcEEEECCCeEEEEE
Confidence 35789999999999886543 2 367899998731 114444444443444555554
No 263
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=24.56 E-value=1.1e+02 Score=25.29 Aligned_cols=16 Identities=25% Similarity=0.385 Sum_probs=10.2
Q ss_pred CCEEEeCCCCeeeeee
Q 029842 123 GDLIVLPAGIYHRFTL 138 (187)
Q Consensus 123 GDlIiIP~g~~H~f~~ 138 (187)
+++.+.+.|....+.+
T Consensus 155 ~~v~V~~DG~~~~~~a 170 (246)
T 3kmh_A 155 SDITVVIDGCRQKHTA 170 (246)
T ss_dssp SCEEEEETTEEEEECT
T ss_pred CCeEEecCCeEEEeCC
Confidence 4667777776666643
No 264
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=23.91 E-value=1.6e+02 Score=21.33 Aligned_cols=41 Identities=15% Similarity=0.184 Sum_probs=28.8
Q ss_pred ceEEEEeece-E-EEEEecCCCcEEEEEEeCCCEE-EeCCCCeeeeeeC
Q 029842 94 EEIRYCLEGS-G-YFDVRDESDQWIRIWIKAGDLI-VLPAGIYHRFTLD 139 (187)
Q Consensus 94 ~Ei~yileG~-g-~f~i~~~~d~~~~~~v~~GDlI-iIP~g~~H~f~~~ 139 (187)
.|+..+..|. | .|.+.-. .+.+++||-| +++.+..|.+...
T Consensus 3 ~~v~ml~~g~~G~~~~F~P~-----~i~V~~GDTV~f~n~~~~Hnv~~~ 46 (124)
T 3ef4_A 3 HIVEMRNKDDAGNTMVFQPG-----FVKVEAGDTVKFVPTDKSHNAESV 46 (124)
T ss_dssp EEEEEEEECTTSCEEEEESS-----EEEECTTCEEEEECSSSSCCCEEC
T ss_pred EEEEEEEcCCCCceeEEeCC-----EEEECCCCEEEEEECCCCccEEEe
Confidence 4566666553 3 4666655 8999999987 5677788988764
No 265
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=23.38 E-value=27 Score=26.24 Aligned_cols=57 Identities=11% Similarity=-0.023 Sum_probs=34.6
Q ss_pred cceEEEEeeceEEEEEecCCC-cEEEEEEeCCCEEEeCC---CCe-eeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLPA---GIY-HRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d-~~~~~~v~~GDlIiIP~---g~~-H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|.......+.+| ..+.-.+.+||++-..+ +.+ +.++.....+..++++
T Consensus 50 ~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~~~~~v~~i 111 (227)
T 3dkw_A 50 AHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAVVPSQLFRF 111 (227)
T ss_dssp CCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEESCTTTTTTCSBCSSCEEESSCCEEEEE
T ss_pred cceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHhcCCCCCCceEEEEcCcEEEEEE
Confidence 567999999999987654433 34556788999875332 333 4444333333444444
No 266
>2cyj_A Hypothetical protein PH1505; conserved hypothetical protein, structural genomics, NPPSFA; HET: OCS; 1.50A {Pyrococcus horikoshii} SCOP: c.103.1.1
Probab=23.12 E-value=26 Score=25.54 Aligned_cols=24 Identities=17% Similarity=0.461 Sum_probs=18.6
Q ss_pred ceEEEEEecCCCcEEEEEEeCCCEEEeCCCCe
Q 029842 102 GSGYFDVRDESDQWIRIWIKAGDLIVLPAGIY 133 (187)
Q Consensus 102 G~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~ 133 (187)
|.|.|.|++. ++ .||+|+.|.|+.
T Consensus 7 g~G~~~i~g~-----~~---~~sviv~p~g~v 30 (118)
T 2cyj_A 7 RFGLVKIDGK-----EF---DHDIVIYPSGRI 30 (118)
T ss_dssp ETTEEEETTE-----EE---SSCEEECTTSCE
T ss_pred cCCEEEECCE-----EE---eeCEEEeCCCcc
Confidence 5678888765 44 489999999983
No 267
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=23.02 E-value=49 Score=23.68 Aligned_cols=44 Identities=16% Similarity=0.166 Sum_probs=33.6
Q ss_pred HHHHhhcCeEEEEcCCC-CCCChHHHHHHHHHcCCCeeeeeeeCc
Q 029842 29 LDQLAELGVLYWRLNPK-NYENDEELQKIREARGYSYMDLLDLCP 72 (187)
Q Consensus 29 ~~~L~~~GV~~w~~~~~-~~~~~~~l~~l~~~~Gy~~~dvv~v~~ 72 (187)
.+.|.+.||.|-.++.. .+.+..+|..+.+..|....++++-+.
T Consensus 20 ~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~~l~n~~~ 64 (120)
T 3fz4_A 20 KAELDDLAWDYDAIDIKKNPPAASLIRNWLENSGLELKKFFNTSG 64 (120)
T ss_dssp HHHHHHHTCCEEEEETTTSCCCHHHHHHHHHHSCCCGGGGBCTTS
T ss_pred HHHHHHcCCceEEEEeccCchhHHHHHHHHHHcCCCHHHHhCCCC
Confidence 57889999998655533 335688999999999987788887654
No 268
>3esg_A HUTD, putative uncharacterized protein; beta barrel, unknown function; 1.80A {Pseudomonas fluorescens} SCOP: b.82.1.0
Probab=21.88 E-value=1.1e+02 Score=24.23 Aligned_cols=49 Identities=6% Similarity=-0.018 Sum_probs=31.0
Q ss_pred cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEc
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFV 151 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~H~f~~~~~~~~~~ir~f~ 151 (187)
.--+.|+++|...+.. +.+.+||.++|-.... .........+..|.+..
T Consensus 143 ~~~lv~~~~G~~~v~~---------~~L~~~D~L~~~~~~~-~~~~~~~~~~~~iel~~ 191 (193)
T 3esg_A 143 QTVLVFSVADEVKVLG---------EKLGHHDCLQVDGNAG-LLDISVTGRCCLIELTQ 191 (193)
T ss_dssp SEEEEEECSSCEEETT---------EEECTTCEEEECSCCS-CEEEEEESSEEEEEEEE
T ss_pred CEEEEEEeeCCEEEEE---------EecCCCCEEEEeCCcc-eEEEecceEEEEEEEEe
Confidence 3446777777665432 6899999999876544 33333335677777754
No 269
>1ihn_A Hypothetical protein MTH938; methanobacterium thermoautotrophicum, unknown function; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.103.1.1
Probab=21.69 E-value=30 Score=24.97 Aligned_cols=24 Identities=21% Similarity=0.242 Sum_probs=18.5
Q ss_pred ceEEEEEecCCCcEEEEEEeCCCEEEeCCCCe
Q 029842 102 GSGYFDVRDESDQWIRIWIKAGDLIVLPAGIY 133 (187)
Q Consensus 102 G~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~~ 133 (187)
|.|.|.|++. ++. ||+|+.|.|+.
T Consensus 8 g~G~~~i~g~-----~~~---~sviv~p~g~v 31 (113)
T 1ihn_A 8 RFGSVTYRGR-----EYR---SDIVVHVDGSV 31 (113)
T ss_dssp ETTEEEETTE-----EEC---SCEEECTTSCE
T ss_pred cCCEEEECCE-----EEe---eCEEEeCCCcc
Confidence 5677888765 443 89999999983
No 270
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=21.51 E-value=2.2e+02 Score=22.00 Aligned_cols=53 Identities=17% Similarity=0.113 Sum_probs=32.6
Q ss_pred cceEEEEeeceEEEEEecCCCcEEEEEEeCCCEEE---eCCCCeeeeeeCCCCcEEEEEE
Q 029842 93 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIV---LPAGIYHRFTLDTSNYVKLMRL 149 (187)
Q Consensus 93 ~~Ei~yileG~g~f~i~~~~d~~~~~~v~~GDlIi---IP~g~~H~f~~~~~~~~~~ir~ 149 (187)
.+.+++|++|......++ . ....+.+||++= +-.+.++..+........++.+
T Consensus 80 ~~~~y~i~~G~v~~~~~g---~-~~~~l~~G~~fGe~~l~~~~~~~~tv~a~~~~~~~~i 135 (291)
T 2qcs_B 80 GDNFYVIDQGEMDVYVNN---E-WATSVGEGGSFGELALIYGTPRAATVKAKTNVKLWGI 135 (291)
T ss_dssp CCEEEEEEECCEEEEETT---E-EEEEECTTCEECGGGGTCCCBCSSEEEESSCEEEEEE
T ss_pred CceEEEEeeeEEEEEECC---e-EEEEcCCCCccchHHHhcCCCCceEEEECCCEEEEEE
Confidence 567999999999888743 2 356788999873 2233444444433334444444
No 271
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=20.98 E-value=50 Score=25.95 Aligned_cols=38 Identities=16% Similarity=0.213 Sum_probs=30.2
Q ss_pred EEEeeceEEEEEecCC---------CcEEEEEEeCCCEEEeCCCCee
Q 029842 97 RYCLEGSGYFDVRDES---------DQWIRIWIKAGDLIVLPAGIYH 134 (187)
Q Consensus 97 ~yileG~g~f~i~~~~---------d~~~~~~v~~GDlIiIP~g~~H 134 (187)
..=|-+++.|.++... +..+.+.+..||+++.+.++..
T Consensus 132 svSLG~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g~~q~ 178 (204)
T 3s57_A 132 SVSFGASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNT 178 (204)
T ss_dssp EEEEESCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEETTHHH
T ss_pred EEECCCceEEEEEEcCCCccccccCCceEEEECCCCCEEEECchhhh
Confidence 4446789999998542 2468999999999999998765
No 272
>3cpk_A Uncharacterized protein Q7W7N7_borpa; BPP2477, BER31, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Bordetella parapertussis 12822} PDB: 2k2e_A
Probab=20.81 E-value=40 Score=25.81 Aligned_cols=28 Identities=25% Similarity=0.418 Sum_probs=21.2
Q ss_pred eceEEEEEecCCCcEEEEEEeCCCEEEeCCCC-eeee
Q 029842 101 EGSGYFDVRDESDQWIRIWIKAGDLIVLPAGI-YHRF 136 (187)
Q Consensus 101 eG~g~f~i~~~~d~~~~~~v~~GDlIiIP~g~-~H~f 136 (187)
-|.|+|.|++. ++ .|++++.|.|+ .+|-
T Consensus 17 Y~~g~~~ing~-----~~---~gsv~v~p~g~v~~W~ 45 (150)
T 3cpk_A 17 YGDGYIEVNQV-----RF---SHAIAFAPEGPVASWP 45 (150)
T ss_dssp EETTEEEETTE-----EE---CSCEEECSSSCCEECC
T ss_pred EcCCEEEECCE-----EE---EcCEEEecCCceeecC
Confidence 36788888865 44 39999999998 5664
No 273
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=20.50 E-value=27 Score=29.10 Aligned_cols=39 Identities=15% Similarity=-0.020 Sum_probs=28.9
Q ss_pred EEEEEEeCCCEEEeCCCCeeeeeeC--CC-CcEEEEEEEcCC
Q 029842 115 WIRIWIKAGDLIVLPAGIYHRFTLD--TS-NYVKLMRLFVGE 153 (187)
Q Consensus 115 ~~~~~v~~GDlIiIP~g~~H~f~~~--~~-~~~~~ir~f~~~ 153 (187)
++.+.+++||+|+.-..+.|.-... +. .....+++....
T Consensus 229 ~v~~~~~aGdvl~f~~~~~H~s~~N~S~~~R~~l~~~y~~~~ 270 (310)
T 3emr_A 229 ISVPTGKAGSVTLFESNTMHGSTSNITPYPRNNLFMVYNSVK 270 (310)
T ss_dssp CBCCCBSTTCEEEEETTCCEEECCCCSSCCCCEEEEEEEEGG
T ss_pred eEEeeeCCceEEEEeCCceecCCCCCCCCCeEEEEEEEeCCc
Confidence 6788999999999999999997643 22 335556665544
Done!