BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029850
(186 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FKN4|CRS2A_ARATH Chloroplastic group IIB intron splicing facilitator CRS2-A,
chloroplastic OS=Arabidopsis thaliana GN=CRS2A PE=2 SV=1
Length = 246
Score = 293 bits (750), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 135/177 (76%), Positives = 155/177 (87%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
+GFEMIDHIA+A I+MNTIQSKAL+GIGS+GEVPILL KPQ YMNFSGESVGPLAA+Y
Sbjct: 70 NIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYY 129
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
Q+PLRHIL+IYD+M L NGVLRLQPKGGH HNGLK+V HL+GCR +PRL IGIGNPPG
Sbjct: 130 QIPLRHILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPG 189
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFNMGQKYKYHAV 186
MDMKA+LLQKFSP+ER+Q+D LEQGVE V+TLV GF +ISRFN+GQKYK+H V
Sbjct: 190 NMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHKV 246
>sp|Q9LF14|CRS2B_ARATH Chloroplastic group IIB intron splicing facilitator CRS2-B,
chloroplastic OS=Arabidopsis thaliana GN=CRS2B PE=2 SV=1
Length = 240
Score = 281 bits (719), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 135/176 (76%), Positives = 156/176 (88%)
Query: 11 VGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQ 70
VGFEMID +A+ + + MNTIQSKALIGIG+I +VPILLAKPQ YMNFSGESVG LA+HY+
Sbjct: 65 VGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLASHYR 124
Query: 71 VPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGK 130
VPLRHIL+IYDEM+L NGVLRLQPKGG G+HNG+KSVM HLDG R FPRL IGIG PPG
Sbjct: 125 VPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGN 184
Query: 131 MDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFNMGQKYKYHAV 186
MDMKA+LLQKFSP+E++QI+ ALEQG EAV+TLVLNGF+Q ISRFN+ QKYK+H V
Sbjct: 185 MDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240
>sp|Q5ZCL8|CRS2_ORYSJ Chloroplastic group IIB intron splicing facilitator CRS2,
chloroplastic OS=Oryza sativa subsp. japonica
GN=Os01g0132800 PE=2 SV=1
Length = 259
Score = 273 bits (699), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 129/176 (73%), Positives = 152/176 (86%)
Query: 11 VGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQ 70
VGFEM+D IA+ + I MNTIQSK+L+GIGSIGEVP+LL KPQ+Y+N+SGE++GPLAA+YQ
Sbjct: 84 VGFEMVDRIARDEGITMNTIQSKSLLGIGSIGEVPVLLVKPQSYINYSGEAIGPLAAYYQ 143
Query: 71 VPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGK 130
VPLRHILV+YDEMSL NGVLRLQ KGGHG HNGL++VM LD RE PRL IGIG+PPGK
Sbjct: 144 VPLRHILVMYDEMSLPNGVLRLQRKGGHGRHNGLQNVMECLDSSRELPRLSIGIGSPPGK 203
Query: 131 MDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFNMGQKYKYHAV 186
MD +A+LLQKFS ER QID ALEQGV+AVRTLVL GF +I RFN+ QKYK+H+V
Sbjct: 204 MDTRAFLLQKFSSEERLQIDTALEQGVDAVRTLVLKGFSGSIERFNLVQKYKFHSV 259
>sp|Q9M5P4|CRS2_MAIZE Chloroplastic group IIB intron splicing facilitator CRS2,
chloroplastic OS=Zea mays GN=CRS2 PE=1 SV=1
Length = 256
Score = 272 bits (696), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 128/176 (72%), Positives = 151/176 (85%)
Query: 11 VGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQ 70
VGFEM+D IA + I MNTIQSK+L+GIGSIGEVP+L+ KPQ+YMN+SGE++GPLAA+YQ
Sbjct: 81 VGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQ 140
Query: 71 VPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGK 130
VPLRHIL+IYD+ SL NGVLRLQ KGGHG HNGL++V+ HLDG REFPRL IGIG+PPGK
Sbjct: 141 VPLRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEHLDGRREFPRLSIGIGSPPGK 200
Query: 131 MDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFNMGQKYKYHAV 186
MD +A+LLQKFS ER QID ALEQGV+AVRTLVL GF + RFN+ QKYK+H V
Sbjct: 201 MDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSGSTERFNLVQKYKFHRV 256
>sp|Q6NLS8|PTHM_ARATH Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana
GN=At5g19830 PE=2 SV=1
Length = 219
Score = 205 bits (522), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/173 (57%), Positives = 131/173 (75%)
Query: 11 VGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQ 70
+GFEMID A++ I MN + KA++G G + ++P++LAKPQ YMN SGES GPLAA+Y+
Sbjct: 38 IGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVILAKPQTYMNLSGESSGPLAAYYK 97
Query: 71 VPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGK 130
+PL +LV++D+M L GVLRLQ KGGHG HNGLKSVMNH G REF RL IGIG PPG+
Sbjct: 98 LPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVMNHFRGNREFARLRIGIGKPPGQ 157
Query: 131 MDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFNMGQKYKY 183
MD KA+LLQKFS RE++D AL +GV+A++ ++ F ++ FN+ QKYK+
Sbjct: 158 MDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDFGESWRLFNVEQKYKH 210
>sp|Q8GW64|PTHC_ARATH Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidopsis thaliana
GN=At1g18440 PE=2 SV=2
Length = 288
Score = 195 bits (495), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 87/166 (52%), Positives = 126/166 (75%)
Query: 11 VGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQ 70
VGFEM+D +A A+ I+MNT+ KAL G G IG +PI+LAKPQ +MN SGESVG + + Y+
Sbjct: 114 VGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAKPQTFMNLSGESVGQIVSFYK 173
Query: 71 VPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGK 130
+PL+ +LV+YD++ L G LRL PKGGHG HNG++S+++ L G R+FPRL IGIG PPGK
Sbjct: 174 IPLKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDRLKGSRDFPRLRIGIGRPPGK 233
Query: 131 MDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
MD ++L++F+ E+E++D + G+EA+R L+L GF+++ + N
Sbjct: 234 MDTANFVLRQFNRQEQEELDHTFQTGLEAIRILLLEGFNKSATFVN 279
>sp|Q5N9Q7|PTHM_ORYSJ Peptidyl-tRNA hydrolase, mitochondrial OS=Oryza sativa subsp.
japonica GN=Os01g0693900 PE=2 SV=1
Length = 250
Score = 191 bits (484), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 128/170 (75%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
VGFEMID IA+A+ I+++++Q KA++G G IG+ PI+LAKPQ +MN SGESVG L +++
Sbjct: 74 NVGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIMLAKPQTFMNASGESVGQLVSYF 133
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++PL +LV+YD++ L LRL PKGGHG HNG++S++NHL R+FPRL IGIG PPG
Sbjct: 134 KIPLNQVLVMYDDLDLPFAKLRLLPKGGHGGHNGVRSIINHLKQNRDFPRLRIGIGRPPG 193
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFNMGQ 179
KMD ++L+ F+ E+E++D A +G+EAVR + L GF+++ + N Q
Sbjct: 194 KMDPANFVLRPFNRKEQEELDFAFHRGLEAVRIMALEGFNKSATYVNTAQ 243
>sp|Q181A2|PTH_CLOD6 Peptidyl-tRNA hydrolase OS=Clostridium difficile (strain 630)
GN=pth PE=3 SV=1
Length = 186
Score = 137 bits (344), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 107/167 (64%), Gaps = 1/167 (0%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
VGF++ID +A+ I++ I+ KALIG G +G +LL KPQ YMN SGE++ + +Y
Sbjct: 20 NVGFDVIDILAKEYNISVTKIKHKALIGEGRVGTEKVLLVKPQTYMNLSGETLIDIYKYY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
+V L +I+V+YD++ L G +R++ KG G HNG+KS+ L G +FPR+ +G+ P
Sbjct: 80 KVDLSNIVVVYDDIDLEVGKIRIRKKGSGGTHNGMKSITKCL-GSNDFPRVRVGVSKPEA 138
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
D+ ++L +F E + I+ ALE+ +A+ +++ D +++++N
Sbjct: 139 GQDLADFVLSRFRKEESDNINEALEKAADAIDSIIRENIDMSMNKYN 185
>sp|A9KR32|PTH_CLOPH Peptidyl-tRNA hydrolase OS=Clostridium phytofermentans (strain ATCC
700394 / DSM 18823 / ISDg) GN=pth PE=3 SV=1
Length = 191
Score = 131 bits (329), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 102/167 (61%), Gaps = 1/167 (0%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
+GF+ I +A I+++T + KA+ G G IG ++LAKPQ YMN SGESV L Y
Sbjct: 20 NIGFDAITRLADDNNISLDTKKHKAICGKGMIGGEKVILAKPQTYMNLSGESVRELIDFY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
+V I+VIYD++SL G LR++ KG G HNG+K+++ HL G EF R+ IG+G+ P
Sbjct: 80 KVTKEEIIVIYDDISLDVGQLRIRTKGSAGGHNGIKNIIAHL-GSDEFCRIKIGVGDKPK 138
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
D+ Y+L +F E I ALE+ +A T++ +G ++ FN
Sbjct: 139 NWDLADYVLARFPKEEEPAIREALEKVSKACETILRDGAKVAMNLFN 185
>sp|B8G3X3|PTH_CHLAD Peptidyl-tRNA hydrolase OS=Chloroflexus aggregans (strain MD-66 /
DSM 9485) GN=pth PE=3 SV=1
Length = 188
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 98/167 (58%), Gaps = 2/167 (1%)
Query: 11 VGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQ 70
+GF ++ +A+ + ++K+ I G I + L KPQ YMN SG++V L Y+
Sbjct: 21 IGFRSVETLAERHGLTFRNQRAKSEIAEGIIRGQRVALVKPQTYMNLSGQAVAALRQWYK 80
Query: 71 V-PLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
+ P R +LVIYD++ L LRL+ +G G HNG++S++ L G EFPRL IGIG PPG
Sbjct: 81 IDPARELLVIYDDLDLPFAKLRLRERGSAGTHNGMRSIVGQL-GTTEFPRLRIGIGQPPG 139
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
+MD Y+L +F+P E + L + +AV +V G ++R+N
Sbjct: 140 QMDAADYVLSRFTPEEEAVLPEVLARVADAVEVVVSEGLTAAMNRYN 186
>sp|A8F920|PTH_BACP2 Peptidyl-tRNA hydrolase OS=Bacillus pumilus (strain SAFR-032)
GN=pth PE=3 SV=1
Length = 188
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 11 VGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQ 70
VGF ID +++ I +N + G G + +LL KP YMN SGE V PL +Y
Sbjct: 21 VGFMTIDELSKKWDIPLNQSKFHGQFGTGFVSGQKVLLVKPLTYMNLSGECVRPLMDYYD 80
Query: 71 VPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGK 130
+PL H+ VIYD++ L G +RL+ KG G HNG+KS++ HL G EF R IGIG P
Sbjct: 81 IPLEHLKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSLIQHL-GSPEFDRFRIGIGRPQNG 139
Query: 131 MDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
M + Y+L +FS E+ I +A++ VEA + F + ++ FN
Sbjct: 140 MKVVDYVLGRFSEEEQPDIASAIQASVEACEAALTKPFLEVMNDFN 185
>sp|C4KZU9|PTH_EXISA Peptidyl-tRNA hydrolase OS=Exiguobacterium sp. (strain ATCC
BAA-1283 / AT1b) GN=pth PE=3 SV=1
Length = 185
Score = 123 bits (309), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 99/167 (59%), Gaps = 1/167 (0%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
VGF ID +A+ I++N + AL+G G I ++L KP YMN SGE+V P+ +Y
Sbjct: 20 NVGFLAIDRLAEKHGISLNEAKFNALMGTGRINGERVVLVKPLTYMNLSGEAVRPILDYY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++ + +LVIYD++ ++ G LR +PKG G HNG+KS++ HL G EF RL +GIG PP
Sbjct: 80 KIEIDDLLVIYDDLDMVPGKLRFRPKGSAGGHNGIKSLIQHL-GTAEFKRLKLGIGRPPH 138
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
+ + ++L + E +++ L+ V A V + ++R+N
Sbjct: 139 PIKVVDWVLMNYRKDELPELNETLDNAVTAATDFVDTDWLALMNRYN 185
>sp|Q47SW2|PTH_THEFY Peptidyl-tRNA hydrolase OS=Thermobifida fusca (strain YX) GN=pth
PE=3 SV=1
Length = 213
Score = 123 bits (308), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 101/161 (62%), Gaps = 1/161 (0%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
VGF ++D +A + ++ A + +G+ P++LAKP +YMN SG V L+A Y
Sbjct: 53 NVGFMVVDELAAQRGERWRLHKAHAQVVETRVGDAPVVLAKPASYMNLSGGPVAKLSAFY 112
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
+VP+ I+V++DE+ + L+L+ GG HNGL+S+ L G ++ R+ +GIG PPG
Sbjct: 113 KVPVDRIIVVHDELDIPFARLKLKRGGGSAGHNGLRSITASL-GSPDYVRVRVGIGRPPG 171
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQ 170
+MD +++LQ FS ER+++D + + +AV T+V +G ++
Sbjct: 172 RMDAASFVLQDFSTAERKELDVHVARAADAVETVVTSGLEK 212
>sp|Q9F8Q3|PTH_CARHZ Peptidyl-tRNA hydrolase OS=Carboxydothermus hydrogenoformans
(strain Z-2901 / DSM 6008) GN=pth PE=3 SV=2
Length = 187
Score = 123 bits (308), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 102/167 (61%), Gaps = 2/167 (1%)
Query: 12 GFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQV 71
GF ++D +A+ I + + K+L+G G I V +LL KPQ YMN SG +V + Y++
Sbjct: 22 GFMVVDELAKKHGILITKRKFKSLVGEGEILGVKVLLLKPQTYMNLSGTAVQEAVSFYKL 81
Query: 72 PLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKM 131
PL ++V+YD++ L G +RL+ KG G H G+ S+++ L G E PRL IGIG P
Sbjct: 82 PLSRLVVVYDDLDLPLGKIRLRLKGSAGGHRGMGSIISCL-GSEEIPRLKIGIGR-PAVG 139
Query: 132 DMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFNMG 178
D+K Y+LQ F+ ERE ++ L+ EA+ + GF++ ++ FN G
Sbjct: 140 DVKDYVLQPFTGAEREILEPTLKLAAEAITVALTEGFNKAMTDFNRG 186
>sp|B9LE93|PTH_CHLSY Peptidyl-tRNA hydrolase OS=Chloroflexus aurantiacus (strain ATCC
29364 / DSM 637 / Y-400-fl) GN=pth PE=3 SV=1
Length = 188
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 100/167 (59%), Gaps = 2/167 (1%)
Query: 11 VGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQ 70
+GF +D +A+ + ++ + + G+I ++LAKPQ YMN SG++V L Y+
Sbjct: 21 IGFRSVDTLAERHGLTFRPQRANSQLAEGNIYGQRVVLAKPQTYMNLSGQAVVALCNWYK 80
Query: 71 V-PLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
+ P R +LVIYD++ L LR++ +G G HNG++S++ L G EFPRL +GIG PPG
Sbjct: 81 IDPARELLVIYDDLDLPFAKLRIRERGSAGTHNGMRSIVAQL-GTTEFPRLRVGIGQPPG 139
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
KMD Y+L +F+P E + L + +AV ++ G ++R+N
Sbjct: 140 KMDAADYVLGRFTPDEEAALPDLLGRIADAVEVILREGLTTAMNRYN 186
>sp|A9WBS1|PTH_CHLAA Peptidyl-tRNA hydrolase OS=Chloroflexus aurantiacus (strain ATCC
29366 / DSM 635 / J-10-fl) GN=pth PE=3 SV=1
Length = 188
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 100/167 (59%), Gaps = 2/167 (1%)
Query: 11 VGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQ 70
+GF +D +A+ + ++ + + G+I ++LAKPQ YMN SG++V L Y+
Sbjct: 21 IGFRSVDTLAERHGLTFRPQRANSQLAEGNIYGQRVVLAKPQTYMNLSGQAVVALCNWYK 80
Query: 71 V-PLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
+ P R +LVIYD++ L LR++ +G G HNG++S++ L G EFPRL +GIG PPG
Sbjct: 81 IDPARELLVIYDDLDLPFAKLRIRERGSAGTHNGMRSIVAQL-GTTEFPRLRVGIGQPPG 139
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
KMD Y+L +F+P E + L + +AV ++ G ++R+N
Sbjct: 140 KMDAADYVLGRFTPDEEAALPDLLGRIADAVEVILREGLTTAMNRYN 186
>sp|C4Z4L5|PTH_EUBE2 Peptidyl-tRNA hydrolase OS=Eubacterium eligens (strain ATCC 27750 /
VPI C15-48) GN=pth PE=3 SV=1
Length = 186
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 98/167 (58%), Gaps = 1/167 (0%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
GF +ID +A I+++T + K LIG G I ++L KP YMN SGE + + +Y
Sbjct: 20 NAGFSVIDELADKYNISVDTAKHKGLIGKGVIAGQKVILVKPMTYMNNSGECIREVMDYY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
+ + LVI+D++SL G LRL+ KG G HNG+KS++ HL G +F R+ G+G+ P
Sbjct: 80 KCDIDDFLVIFDDISLDVGKLRLRAKGSAGGHNGIKSIIAHL-GSDKFKRIKFGVGDKPK 138
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
D+ ++L KF E + A ++ EAV ++ +G + ++++N
Sbjct: 139 NWDLADWVLGKFPAEEYATLREANKKACEAVECILTDGIESGMNKYN 185
>sp|A5I7R5|PTH_CLOBH Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Hall /
ATCC 3502 / NCTC 13319 / Type A) GN=pth PE=3 SV=1
Length = 189
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
+GF+++D IA+ I +N + K G G IG I+L KP YMN SGESV A Y
Sbjct: 20 NIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKPSTYMNLSGESVIEAANFY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++ +I+VIYD+MS+ G LR++ KG G HNG+K+++ HL+ FPR+ +GIG P
Sbjct: 80 KIDKENIIVIYDDMSIDIGKLRVRSKGSAGGHNGIKNIIQHLN-SDIFPRVRVGIGQPD- 137
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
++ Y+L KFS ERE I+ L +A ++V +G + ++++N
Sbjct: 138 -ENVVNYVLGKFSKDEREIIEKVLAMSAKACISIVEDGVTEAMNKYN 183
>sp|A7FPJ7|PTH_CLOB1 Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain ATCC 19397
/ Type A) GN=pth PE=3 SV=1
Length = 189
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
+GF+++D IA+ I +N + K G G IG I+L KP YMN SGESV A Y
Sbjct: 20 NIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKPSTYMNLSGESVIEAANFY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++ +I+VIYD+MS+ G LR++ KG G HNG+K+++ HL+ FPR+ +GIG P
Sbjct: 80 KIDKENIIVIYDDMSIDIGKLRVRSKGSAGGHNGIKNIIQHLN-SDIFPRVRVGIGQPD- 137
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
++ Y+L KFS ERE I+ L +A ++V +G + ++++N
Sbjct: 138 -ENVVNYVLGKFSKDEREIIEKVLAMSAKACISIVEDGVTEAMNKYN 183
>sp|B1IGZ7|PTH_CLOBK Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Okra /
Type B1) GN=pth PE=3 SV=1
Length = 189
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
+GF+++D IA+ I +N + K G G IG I+L KP YMN SGESV A Y
Sbjct: 20 NIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKPSTYMNLSGESVIEAANFY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++ +I+VIYD+MS+ G LR++ KG G HNG+K+++ HL+ FPR+ +GIG P
Sbjct: 80 KIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHLN-SDIFPRVRVGIGQPD- 137
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
++ Y+L KFS +RE ID L +A ++V +G + ++++N
Sbjct: 138 -ENVVNYVLGKFSKDQREIIDKVLAMSAKACISIVEDGVTEAMNKYN 183
>sp|Q5L3U7|PTH_GEOKA Peptidyl-tRNA hydrolase OS=Geobacillus kaustophilus (strain HTA426)
GN=pth PE=3 SV=1
Length = 186
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 98/167 (58%), Gaps = 1/167 (0%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
VGF +ID +A+ +++ T + + L G S+ + L KP YMN SGE V PL +Y
Sbjct: 20 NVGFFVIDELAKRWNVSLKTAKFRGLFGTASVSGEKVALCKPLTYMNLSGECVRPLMDYY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
+ + ++VIYD++ L G +RL+ KG G HNG+KS+++HL G +F R+ IGIG P G
Sbjct: 80 DIAIDDVIVIYDDLDLPPGKIRLRLKGSSGGHNGVKSLIHHL-GTEQFKRIRIGIGRPAG 138
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
+ Y+L +F+ E+ +D A+ + +A V F Q ++ FN
Sbjct: 139 GQPVTDYVLGRFTEEEKPAVDKAVLRAADACEQAVKAPFIQVMNDFN 185
>sp|Q10LI6|CRS2L_ORYSJ CRS2-like protein, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os03g0347800 PE=2 SV=1
Length = 186
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/94 (61%), Positives = 71/94 (75%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
VGF+MID AQ+Q I++ KAL G G + VP+LLAKPQ YMN SGESVGPLAA+Y
Sbjct: 79 NVGFDMIDMFAQSQGISLTRHPFKALFGEGMVEGVPVLLAKPQTYMNLSGESVGPLAAYY 138
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNG 103
++PL +LV +D+M L GVLRLQPKGG+G HNG
Sbjct: 139 KLPLNRVLVAFDDMDLPCGVLRLQPKGGYGRHNG 172
>sp|A0PXL3|PTH_CLONN Peptidyl-tRNA hydrolase OS=Clostridium novyi (strain NT) GN=pth
PE=3 SV=1
Length = 188
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 102/167 (61%), Gaps = 2/167 (1%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
VGF++ID I++ I +N + K + G G+I ++L KP YMN SGES+ + Y
Sbjct: 20 NVGFDIIDVISEKYNIDLNKKKFKGMYGDGTIANEKVILLKPLTYMNLSGESIKEVTDFY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++P +++VIYD++SL G +R++ KG G HNG+K+++ H G FPR+ +G+G P
Sbjct: 80 KIPKENVIVIYDDISLEVGRMRIREKGSAGGHNGIKNIIAHF-GSDVFPRIKVGVGQPV- 137
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
+ D+ +++L KF+ +RE + E +A ++ G + +++FN
Sbjct: 138 QRDLVSHVLGKFNKDDREILSKVFEAASDAAENIIEKGTAEAMNKFN 184
>sp|C1FNE6|PTH_CLOBJ Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Kyoto /
Type A2) GN=pth PE=3 SV=1
Length = 189
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
+GF+++D IA+ I +N + K G G IG I+L KP YMN SGESV A Y
Sbjct: 20 NIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKPSTYMNLSGESVIEAANFY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++ +I+VIYD+MS+ G LR++ KG G HNG+K+++ HL+ FPR+ +GIG P
Sbjct: 80 KIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHLN-SDIFPRVRVGIGQPD- 137
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
++ Y+L KFS ERE I+ L +A ++V +G + ++++N
Sbjct: 138 -ENVVNYVLGKFSKDEREIIEKVLAMSAKACISIVEDGVTEAMNKYN 183
>sp|Q97E97|PTH_CLOAB Peptidyl-tRNA hydrolase OS=Clostridium acetobutylicum (strain ATCC
824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=pth
PE=3 SV=1
Length = 187
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 103/167 (61%), Gaps = 3/167 (1%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
+GF+ I++IA I+++ K L G G I ++L KP YMN SGESV A +Y
Sbjct: 20 NMGFDAIENIAAKHNISIDKKGFKGLYGKGIIDGEKVILLKPYTYMNLSGESVVEAANYY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++ +I+VIYD++SL G +R++ KG G HNG+K+++ HL EFPR+ +G+G P
Sbjct: 80 KINKENIVVIYDDISLDVGKIRIRTKGSAGGHNGIKNIVLHLS-SEEFPRVKVGVGEPT- 137
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
++ Y+L KFS ER++I+ L EAV +V++G +++FN
Sbjct: 138 -ENLVNYVLGKFSQDERKKIEEVLNIVTEAVECMVVDGVQNAMNKFN 183
>sp|A4XIS3|PTH_CALS8 Peptidyl-tRNA hydrolase OS=Caldicellulosiruptor saccharolyticus
(strain ATCC 43494 / DSM 8903) GN=pth PE=3 SV=1
Length = 189
Score = 120 bits (300), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 101/172 (58%), Gaps = 3/172 (1%)
Query: 5 TIISCQVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGP 64
T GF ID++AQA ++ I+ K L G + +LL KP YMN SG+S+
Sbjct: 16 TFTRHNAGFLAIDYLAQAFNTKVDKIKFKGLTGSFEYADKKVLLLKPMTYMNSSGDSIVE 75
Query: 65 LAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGI 124
Y+V ++VIYD+++ GV++++ KG G HNG+KS++ L G EFPR+ IGI
Sbjct: 76 AVNFYKVKPEKLIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQRL-GTEEFPRIRIGI 134
Query: 125 GNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
G P K DM Y+L +F E+++I A+E+ + ++ L+ +G D+ ++ N
Sbjct: 135 GVP--KEDMVKYVLSEFEDYEKQKIFRAIEKAAQGIKILLESGIDRAMNYIN 184
>sp|Q8R757|PTH_THETN Peptidyl-tRNA hydrolase OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=pth PE=3
SV=1
Length = 185
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 105/167 (62%), Gaps = 2/167 (1%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
VGF +ID +++ I ++ ++ K+L+G G ++L KPQ +MN SGE++ Y
Sbjct: 20 NVGFMVIDALSKKLGIEVSRLKFKSLMGEGHFKGEKVILLKPQTFMNLSGEALYDAVNFY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++PL +++V+YD+ L G +R++ KG G HNG+ S++ +L +FPR+ IGIG P
Sbjct: 80 KIPLENVIVVYDDKDLEVGKIRIRRKGSSGGHNGMNSII-YLLNSEDFPRVRIGIGKPED 138
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
D+ ++L +FS E++ ID A+E+ EAV ++ NG + +SRFN
Sbjct: 139 G-DLVRHVLGRFSDEEKKVIDEAVERAAEAVIDIMENGIEHAMSRFN 184
>sp|A8MK43|PTH_ALKOO Peptidyl-tRNA hydrolase OS=Alkaliphilus oremlandii (strain OhILAs)
GN=pth PE=3 SV=1
Length = 185
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 104/167 (62%), Gaps = 2/167 (1%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
+GFE ID +A+ I + ++ KAL G G+IG +LL KPQ +MN SG+S+ + Y
Sbjct: 20 NIGFEAIDMLAKRNNIEVKKLKHKALCGEGTIGGNKVLLVKPQTFMNLSGQSLLDIVQFY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
+V ++I+V+YD++ + G LR++ KG G HNG+KS++ +L +FPR+ IG+G P
Sbjct: 80 KVDPKNIVVLYDDIDIPVGTLRIREKGSSGTHNGMKSII-YLLQTDQFPRIRIGVGKPQF 138
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
D+ Y+L +F E + LE+ +AV TLV +G +++R+N
Sbjct: 139 G-DLADYVLGRFPKEEIPTMLETLERASQAVETLVKDGIAVSMNRYN 184
>sp|A7GJD4|PTH_CLOBL Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Langeland
/ NCTC 10281 / Type F) GN=pth PE=3 SV=1
Length = 189
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
+GF+++D IA+ I +N + K G G IG I+L KP YMN SGESV A Y
Sbjct: 20 NIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKPSTYMNLSGESVIEAANFY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++ +I+VIYD+MS+ G LR++ KG G HNG+K+++ HL+ FPR+ +GIG P
Sbjct: 80 KIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHLN-SDIFPRVRVGIGQPD- 137
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
++ Y+L KFS +RE I+ L +A ++V +G + ++++N
Sbjct: 138 -ENVVNYVLGKFSKDQREIIEKVLAMSAKACISIVEDGVTEAMNKYN 183
>sp|B0K466|PTH_THEPX Peptidyl-tRNA hydrolase OS=Thermoanaerobacter sp. (strain X514)
GN=pth PE=3 SV=1
Length = 184
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 105/167 (62%), Gaps = 3/167 (1%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
VGF +ID +A+ + + ++ K+L+G G+ I+L KPQ +MN SGE++ Y
Sbjct: 20 NVGFMVIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLKPQTFMNSSGEALYDAVNFY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++PL +++VIYD+ L G +R++ KG G HNG+ S++ +L EFPR+ IGIG P
Sbjct: 80 KIPLENVIVIYDDKDLDLGKIRIRKKGSSGGHNGMNSII-YLLNSEEFPRVRIGIGKP-- 136
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
+ D+ +++L KF E++ ID A+ + +AV ++ NG + +S+FN
Sbjct: 137 QKDLVSHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEHAMSKFN 183
>sp|C3KW96|PTH_CLOB6 Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain 657 / Type
Ba4) GN=pth PE=3 SV=1
Length = 189
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
+GF+++D IA+ I +N + K G G IG I+L KP YMN SGESV A Y
Sbjct: 20 NIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKPSTYMNLSGESVIEAANFY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++ +I+VIYD+MS+ G LR++ KG G HNG+K+++ HL+ FPR+ +GIG P
Sbjct: 80 KIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHLN-SDIFPRVRVGIGQPD- 137
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
++ Y+L KFS +RE I+ L +A ++V +G + ++++N
Sbjct: 138 -ENVVNYVLGKFSKDQREIIEKVLAMSAKACISIVEDGVTEAMNKYN 183
>sp|B1KTE2|PTH_CLOBM Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Loch Maree
/ Type A3) GN=pth PE=3 SV=1
Length = 189
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
+GF+++D +A+ I +N + K G G IG I+L KP YMN SGESV A Y
Sbjct: 20 NIGFDVVDIVAEKYNIEINRQKFKGSYGEGRIGNEKIILLKPSTYMNLSGESVIEAANFY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++ +I+VIYD+MS+ G LR++ KG G HNG+K+++ HL+ FPR+ +GIG P
Sbjct: 80 KIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHLN-SDIFPRVRVGIGQPD- 137
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
++ Y+L KFS +RE I+ L +A ++V +G + ++++N
Sbjct: 138 -ENVVNYVLGKFSKDQREVIEKVLAMSAKACISIVEDGVTEAMNKYN 183
>sp|Q4L3F9|PTH_STAHJ Peptidyl-tRNA hydrolase OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=pth PE=3 SV=1
Length = 190
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 97/167 (58%), Gaps = 2/167 (1%)
Query: 11 VGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQ 70
+GFE+ID+I + +++ + K I + +L +P MN SGE+VGPL +Y
Sbjct: 21 IGFEVIDYILKKHNFSLDKQKFKGAYTIERLNGDKVLFIEPMTMMNLSGEAVGPLMDYYN 80
Query: 71 VPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGK 130
V + ++V+YD++ L G +RL+ KG G HNG+KS++ HL G +F R+ IG+G P
Sbjct: 81 VEVEDLIVLYDDLDLSQGQIRLRQKGSAGGHNGMKSIIKHL-GTDQFKRIRIGVGRPTNG 139
Query: 131 MDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNG-FDQNISRFN 176
M + Y+LQKFS E +D +E AV + + FD ++++N
Sbjct: 140 MSVPDYVLQKFSKEEMITMDKVIEHSAHAVEAFIESSRFDHVMNQYN 186
>sp|P37470|PTH_BACSU Peptidyl-tRNA hydrolase OS=Bacillus subtilis (strain 168) GN=spoVC
PE=3 SV=1
Length = 188
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 95/167 (56%), Gaps = 1/167 (0%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
VGF +ID +A+ I +N + L G G + +LL KP YMN SGE + PL +Y
Sbjct: 20 NVGFMVIDQLAKEWNIELNQNKFNGLYGTGFVSGKKVLLVKPLTYMNLSGECLRPLMDYY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
V + VIYD++ L G +RL+ KG G HNG+KS++ HL G EF R+ IGIG P
Sbjct: 80 DVDNEDLTVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL-GTSEFDRIRIGIGRPVN 138
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
M + Y+L F+ E +I+ A+++ V+A + F + ++ FN
Sbjct: 139 GMKVVDYVLGSFTKEEAPEIEEAVDKSVKACEASLSKPFLEVMNEFN 185
>sp|B2TI10|PTH_CLOBB Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Eklund 17B
/ Type B) GN=pth PE=3 SV=1
Length = 191
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 101/167 (60%), Gaps = 3/167 (1%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
+GFE+ID+I+ I +N + + + G G I ++L KP YMN SG+SV +A Y
Sbjct: 20 NIGFEVIDNISNEYNIDINRQKFRGVYGEGFIANNKVILLKPTTYMNLSGDSVREVANFY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++ +I+VIYD++SL G LR++ KG G HNG+KS++ +L FPR+ +G+G P
Sbjct: 80 KISNENIIVIYDDISLDIGRLRIREKGSAGGHNGIKSIIANL-STDVFPRIKVGVGQP-- 136
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
+D+ Y+L KFS E+E + ++E +V ++ + +++FN
Sbjct: 137 NIDLVNYVLGKFSKEEKEVLKESIEVATNSVEEIIKQDVNSAMNKFN 183
>sp|B0KBG1|PTH_THEP3 Peptidyl-tRNA hydrolase OS=Thermoanaerobacter pseudethanolicus
(strain ATCC 33223 / 39E) GN=pth PE=3 SV=1
Length = 184
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 105/167 (62%), Gaps = 3/167 (1%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
VGF +ID +A+ + + ++ K+L+G G+ I+L KPQ ++N SGE++ Y
Sbjct: 20 NVGFMVIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLKPQTFVNSSGEALYDAVNFY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++PL +++VIYD+ L G +R++ KG G HNG+ S++ +L EFPR+ IGIG P
Sbjct: 80 KIPLENVIVIYDDKDLDVGKIRIRKKGSSGGHNGMNSII-YLLNSEEFPRVRIGIGKP-- 136
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
+ D+ +++L KF E++ ID A+ + +AV ++ NG + +S+FN
Sbjct: 137 QKDLVSHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEHAMSKFN 183
>sp|A6TJM7|PTH_ALKMQ Peptidyl-tRNA hydrolase OS=Alkaliphilus metalliredigens (strain
QYMF) GN=pth PE=3 SV=1
Length = 185
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 100/167 (59%), Gaps = 2/167 (1%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
VGF++ID +A I +N ++ KAL G IG ++LAKPQ +MN SGES+ + Y
Sbjct: 20 NVGFDVIDLLAHRLGITVNKLKHKALYGEARIGGEKVILAKPQTFMNLSGESIREMMQFY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++ +++VIYD++ + G LR++ G G HNG+KS + L FPR+ IG+G P
Sbjct: 80 KIDPENLIVIYDDIDVKVGSLRIRQSGSAGTHNGMKSTIYQLQ-TDAFPRIRIGVGRPEF 138
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
D+ Y+L F+ E + +LE+ V ++V++G D+ ++R+N
Sbjct: 139 G-DLSNYVLGSFTKDEIPLMKESLERATLTVESIVIDGIDKAMNRYN 184
>sp|B2UXS9|PTH_CLOBA Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Alaska E43
/ Type E3) GN=pth PE=3 SV=1
Length = 191
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 3/167 (1%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
+GFE+ID+I+ I +N + K + G G I ++L KP YMN SG+SV +A Y
Sbjct: 20 NIGFEVIDNISNEYNIDINRQKFKGVYGEGFIANNKVILLKPTTYMNLSGDSVREVANFY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++ +I+VIYD++SL G LR++ KG G HNG+KS++ +L FPR+ +G+G P
Sbjct: 80 KISNENIIVIYDDISLDIGRLRIREKGSAGGHNGIKSIIANL-STDVFPRIKVGVGQPND 138
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
++ Y+L KFS E+E + ++E +V ++ + +++FN
Sbjct: 139 --NLVDYVLGKFSKEEKEVLKESIEAATNSVEEIIKQDINSAMNKFN 183
>sp|A7GJW3|PTH_BACCN Peptidyl-tRNA hydrolase OS=Bacillus cereus subsp. cytotoxis (strain
NVH 391-98) GN=pth PE=3 SV=1
Length = 186
Score = 116 bits (291), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 96/167 (57%), Gaps = 1/167 (0%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
+GF ID +A+ I++N + K + G G + ++L KP YMN SGES+ PL +Y
Sbjct: 20 NIGFMAIDELAKRWNISLNEQKFKGMFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++ L +++YD++ L G LRL+ KG G HNG+KS + HL G +EF R+ +GI P
Sbjct: 80 KIDLEDFIIMYDDLDLPVGKLRLRMKGSAGGHNGVKSTIAHL-GTQEFQRIRMGIDRPKN 138
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
M + Y+L +F+ E ++ A+E+ A + F Q ++ FN
Sbjct: 139 GMKVVDYVLGRFTAEEMVDVNHAIEKAANACEEWLNKSFLQVMNDFN 185
>sp|A4IJC9|PTH_GEOTN Peptidyl-tRNA hydrolase OS=Geobacillus thermodenitrificans (strain
NG80-2) GN=pth PE=3 SV=1
Length = 186
Score = 116 bits (291), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 96/167 (57%), Gaps = 1/167 (0%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
+GF +ID +A+ +++ T + + L G S+ + L KP YMN SGE V PL Y
Sbjct: 20 NIGFFVIDELAKRWNVSLKTAKFRGLFGTASVFGEKVALCKPLTYMNLSGECVCPLIDFY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
+ + +++IYD++ L G +RL+ KGG G HNG+KS+++HL G +F R+ IGIG P
Sbjct: 80 DIAVDDVIIIYDDLDLPPGKIRLRLKGGSGGHNGVKSIIHHL-GTEQFKRIRIGIGRPTN 138
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
+ Y+L +F+ E+ + A+ + +A V F Q ++ FN
Sbjct: 139 GQPVADYVLSRFTEEEKPAVMEAVLRAADACEQAVTTPFIQVMNDFN 185
>sp|Q65PG8|PTH_BACLD Peptidyl-tRNA hydrolase OS=Bacillus licheniformis (strain DSM 13 /
ATCC 14580) GN=pth PE=3 SV=1
Length = 188
Score = 116 bits (291), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 93/167 (55%), Gaps = 1/167 (0%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
VGF ID +++ I ++ + GIG + +LL KP YMN SGE + PL +Y
Sbjct: 20 NVGFMTIDELSKEWNIPLDKTKFNGQYGIGFVSGKKVLLVKPLTYMNLSGECLRPLLDYY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++P+ ++ VIYD++ L G +RL+ KG G HNG+KS + HL G EF R+ IGIG P
Sbjct: 80 EIPVDNLKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSTIQHL-GTSEFNRIRIGIGRPVN 138
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
M + Y+L F+ E I A+ Q +A + F + ++ FN
Sbjct: 139 GMKVVDYVLGAFTDEEEPAIKEAVRQSAKACEASLEKPFLEVMNEFN 185
>sp|Q8XHJ8|PTH_CLOPE Peptidyl-tRNA hydrolase OS=Clostridium perfringens (strain 13 /
Type A) GN=pth PE=3 SV=1
Length = 188
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 104/167 (62%), Gaps = 3/167 (1%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
+GF++ID++A I +N + K + G G I ++L KP YMN SGES+ LA Y
Sbjct: 20 NIGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLKPLTYMNLSGESIRELANFY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++ I+V+YD++SL G LR++ KG G HNG+KS++ +L G + FPR+ +G+G P
Sbjct: 80 KLEDDEIIVVYDDISLDIGRLRIREKGSAGGHNGIKSIIQNLGGDK-FPRVKVGVGQP-- 136
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
K ++ ++L KFS +RE I+ + +A+ +V N +++++FN
Sbjct: 137 KDNLVNHVLGKFSKEDREHIEKVIPVVSDAIVEIVKNDAKESMNKFN 183
>sp|Q0TMG7|PTH_CLOP1 Peptidyl-tRNA hydrolase OS=Clostridium perfringens (strain ATCC
13124 / NCTC 8237 / Type A) GN=pth PE=3 SV=1
Length = 188
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 104/167 (62%), Gaps = 3/167 (1%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
+GF++ID++A I +N + K + G G I ++L KP YMN SGES+ LA Y
Sbjct: 20 NIGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLKPLTYMNLSGESIRELANFY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++ I+V+YD++SL G LR++ KG G HNG+KS++ +L G + FPR+ +G+G P
Sbjct: 80 KLEDDEIIVVYDDISLDIGRLRIREKGSAGGHNGIKSIIQNLGGDK-FPRVKVGVGQP-- 136
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
K ++ ++L KFS +RE I+ + +A+ +V N +++++FN
Sbjct: 137 KDNLVNHVLGKFSKEDREHIEKVIPVVSDAIVEIVKNDAKESMNKFN 183
>sp|A5US07|PTH_ROSS1 Peptidyl-tRNA hydrolase OS=Roseiflexus sp. (strain RS-1) GN=pth
PE=3 SV=1
Length = 217
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 98/167 (58%), Gaps = 2/167 (1%)
Query: 11 VGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQ 70
+GF ++ +AQ R+ ++ A I G I + LA PQ YMN SG++V L Y+
Sbjct: 21 IGFRVVSELAQRHRLEFTHKRAHARIAEGIIAGQRVALALPQTYMNLSGQAVVGLRQWYK 80
Query: 71 V-PLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
+ P +LV+YD++ L GVLRL+ +G G HNG++S++ L G + FPRL IGI PP
Sbjct: 81 IDPATELLVVYDDVDLPFGVLRLRERGSAGTHNGMRSIITLL-GSQVFPRLRIGIDRPPP 139
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
D+ Y+L +F+P + Q+ +++ +A+ T+V G ++R N
Sbjct: 140 AWDLADYVLGRFTPEQEAQLPDIMQKAADALETVVREGMAVAMNRIN 186
>sp|Q6HPW6|PTH_BACHK Peptidyl-tRNA hydrolase OS=Bacillus thuringiensis subsp. konkukian
(strain 97-27) GN=pth PE=3 SV=1
Length = 186
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 98/167 (58%), Gaps = 1/167 (0%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
+GF ID +A+ I++N + K L G G + ++L KP YMN SGES+ PL +Y
Sbjct: 20 NIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++ + +V+YD++ + G LRL+ KG G HNG+KS ++HL G +EF R+ +GI P
Sbjct: 80 KIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKN 138
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
M + Y+L +F+ E ++ ++E+ +A + F Q ++ FN
Sbjct: 139 GMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFN 185
>sp|Q81VY9|PTH_BACAN Peptidyl-tRNA hydrolase OS=Bacillus anthracis GN=pth PE=3 SV=1
Length = 186
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 98/167 (58%), Gaps = 1/167 (0%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
+GF ID +A+ I++N + K L G G + ++L KP YMN SGES+ PL +Y
Sbjct: 20 NIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++ + +V+YD++ + G LRL+ KG G HNG+KS ++HL G +EF R+ +GI P
Sbjct: 80 KIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKN 138
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
M + Y+L +F+ E ++ ++E+ +A + F Q ++ FN
Sbjct: 139 GMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFN 185
>sp|B1I197|PTH_DESAP Peptidyl-tRNA hydrolase OS=Desulforudis audaxviator (strain MP104C)
GN=pth PE=3 SV=1
Length = 195
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 96/167 (57%), Gaps = 4/167 (2%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
GF ++D +A A +N + +L+G G + V ++LAKPQ YMN SG +V L HY
Sbjct: 20 NAGFMVVDRLAGAAGTTVNRRRCFSLVGEGRLNGVRVVLAKPQTYMNLSGLAVSALCRHY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++ L +LVI D++ L G +RL+PKGG G H GL S++ L G +FPR+ IGIG
Sbjct: 80 RLELADLLVICDDLDLEFGRIRLRPKGGSGGHRGLASIIAAL-GSSDFPRVRIGIGKAE- 137
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
D A++L +F+P ++ ++ L A G D+ +SRFN
Sbjct: 138 --DASAHVLGEFAPEDQSGLEEILSTAALAAACACREGLDEAMSRFN 182
>sp|Q63HI2|PTH_BACCZ Peptidyl-tRNA hydrolase OS=Bacillus cereus (strain ZK / E33L)
GN=pth PE=3 SV=1
Length = 186
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 98/167 (58%), Gaps = 1/167 (0%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
+GF ID +A+ I++N + K + G G + ++L KP YMN SGES+ PL +Y
Sbjct: 20 NIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++ + +V+YD++ + G LRL+ KG G HNG+KS ++HL G +EF R+ +GI P
Sbjct: 80 KIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKN 138
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
M + Y+L +F+ E ++ ++E+ +A + F Q ++ FN
Sbjct: 139 GMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFN 185
>sp|B9IZD4|PTH_BACCQ Peptidyl-tRNA hydrolase OS=Bacillus cereus (strain Q1) GN=pth PE=3
SV=1
Length = 186
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 98/167 (58%), Gaps = 1/167 (0%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
+GF ID +A+ I++N + K + G G + ++L KP YMN SGES+ PL +Y
Sbjct: 20 NIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++ + +V+YD++ + G LRL+ KG G HNG+KS ++HL G +EF R+ +GI P
Sbjct: 80 KIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKN 138
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
M + Y+L +F+ E ++ ++E+ +A + F Q ++ FN
Sbjct: 139 GMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFN 185
>sp|Q81J96|PTH_BACCR Peptidyl-tRNA hydrolase OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=pth PE=3 SV=2
Length = 186
Score = 113 bits (283), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 98/167 (58%), Gaps = 1/167 (0%)
Query: 10 QVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHY 69
+GF ID +A+ I++N + K + G G + ++L KP YMN SGES+ PL +Y
Sbjct: 20 NIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYY 79
Query: 70 QVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 129
++ + +V+YD++ + G LRL+ KG G HNG+KS ++HL G +EF R+ +GI P
Sbjct: 80 KIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKN 138
Query: 130 KMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 176
M + Y+L +F+ E ++ ++E+ +A + F Q ++ FN
Sbjct: 139 GMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFN 185
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.140 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,048,929
Number of Sequences: 539616
Number of extensions: 2888404
Number of successful extensions: 7442
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 6124
Number of HSP's gapped (non-prelim): 758
length of query: 186
length of database: 191,569,459
effective HSP length: 111
effective length of query: 75
effective length of database: 131,672,083
effective search space: 9875406225
effective search space used: 9875406225
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)