Query 029855
Match_columns 186
No_of_seqs 110 out of 516
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 07:06:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029855.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029855hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iqu_A 14-3-3 protein sigma; s 100.0 4.3E-74 1.5E-78 479.8 16.0 180 4-186 6-197 (236)
2 3uzd_A 14-3-3 protein gamma; s 100.0 9.5E-74 3.2E-78 480.4 17.0 181 3-186 1-195 (248)
3 3ubw_A 14-3-3E, 14-3-3 protein 100.0 1.7E-73 5.9E-78 481.0 17.3 181 3-186 28-220 (261)
4 2br9_A 14-3-3E, 14-3-3 protein 100.0 6.1E-72 2.1E-76 467.1 17.0 181 3-186 2-194 (234)
5 1o9d_A 14-3-3-like protein C; 100.0 8.4E-71 2.9E-75 465.8 17.6 182 4-186 6-199 (260)
6 2npm_A 14-3-3 domain containin 100.0 1.5E-70 5E-75 464.1 16.8 181 5-186 27-219 (260)
7 2o8p_A 14-3-3 domain containin 100.0 1.8E-69 6.3E-74 448.8 17.5 169 5-186 2-189 (227)
8 3efz_A 14-3-3 protein; 14-3-3, 100.0 9.6E-70 3.3E-74 459.3 12.8 175 5-186 28-218 (268)
9 3lf9_A 4E10_D0_1IS1A_001_C (T1 78.7 9.6 0.00033 28.1 7.4 50 20-69 11-60 (121)
10 4g1t_A Interferon-induced prot 61.4 42 0.0014 27.6 8.7 35 151-185 351-392 (472)
11 3qky_A Outer membrane assembly 59.6 54 0.0019 24.8 11.1 63 10-73 152-223 (261)
12 3ulq_A Response regulator aspa 59.5 36 0.0012 27.5 7.9 53 122-185 101-163 (383)
13 3u4t_A TPR repeat-containing p 57.6 56 0.0019 24.3 10.0 15 150-164 237-251 (272)
14 4gfq_A Ribosome-recycling fact 55.8 22 0.00074 28.6 5.6 69 40-113 127-199 (209)
15 1lyp_A CAP18; lipopolysacchari 55.7 24 0.00081 19.4 4.4 26 85-110 4-29 (32)
16 3vtx_A MAMA; tetratricopeptide 55.4 51 0.0018 23.2 13.3 58 7-69 6-63 (184)
17 4ga2_A E3 SUMO-protein ligase 52.4 37 0.0013 23.9 6.1 43 9-55 34-76 (150)
18 3ma5_A Tetratricopeptide repea 51.0 47 0.0016 21.5 9.7 58 7-69 8-65 (100)
19 2wh5_A Acyl-COA-binding domain 49.6 26 0.00089 25.0 4.7 50 20-71 10-75 (106)
20 1dd5_A Ribosome recycling fact 49.1 36 0.0012 26.6 5.9 67 40-112 103-174 (185)
21 2kat_A Uncharacterized protein 48.9 52 0.0018 21.3 12.1 59 6-69 19-77 (115)
22 3u4t_A TPR repeat-containing p 48.3 80 0.0027 23.4 7.8 27 9-35 77-103 (272)
23 3hym_B Cell division cycle pro 47.3 91 0.0031 23.6 14.5 57 8-69 127-183 (330)
24 1ise_A Ribosome recycling fact 47.0 38 0.0013 26.5 5.7 67 40-112 103-174 (185)
25 1is1_A Ribosome recycling fact 46.2 40 0.0014 26.4 5.7 67 40-112 103-174 (185)
26 1eh1_A Ribosome recycling fact 44.8 38 0.0013 26.5 5.4 73 40-113 104-176 (185)
27 1wqg_A Ribosome recycling fact 44.7 44 0.0015 26.1 5.7 67 40-112 103-174 (185)
28 4gco_A Protein STI-1; structur 44.4 45 0.0015 22.8 5.3 60 7-71 48-107 (126)
29 3q15_A PSP28, response regulat 44.1 56 0.0019 26.4 6.6 55 120-185 97-161 (378)
30 1xnf_A Lipoprotein NLPI; TPR, 44.0 94 0.0032 22.9 10.0 57 8-69 79-135 (275)
31 1ge9_A Ribosome recycling fact 42.4 69 0.0024 25.0 6.5 68 40-113 105-174 (184)
32 3bee_A Putative YFRE protein; 41.9 35 0.0012 22.7 4.3 29 7-35 44-72 (93)
33 3k9i_A BH0479 protein; putativ 40.9 74 0.0025 20.8 8.6 59 7-70 28-86 (117)
34 2l6j_A TPR repeat-containing p 38.2 73 0.0025 19.9 6.0 30 6-35 4-33 (111)
35 3sz7_A HSC70 cochaperone (SGT) 37.3 1E+02 0.0035 21.3 11.2 26 10-35 49-74 (164)
36 1na3_A Designed protein CTPR2; 36.7 69 0.0024 19.2 6.2 60 7-71 10-69 (91)
37 3hym_B Cell division cycle pro 36.3 1.4E+02 0.0047 22.6 11.8 60 7-71 23-82 (330)
38 2xcb_A PCRH, regulatory protei 36.2 1E+02 0.0034 20.9 11.5 25 10-34 22-46 (142)
39 1hxi_A PEX5, peroxisome target 35.9 98 0.0033 20.7 6.2 59 7-70 18-76 (121)
40 2fbn_A 70 kDa peptidylprolyl i 35.0 96 0.0033 22.3 6.2 60 7-71 89-148 (198)
41 2xcb_A PCRH, regulatory protei 34.6 88 0.003 21.2 5.6 59 7-70 53-111 (142)
42 2kck_A TPR repeat; tetratricop 33.5 84 0.0029 19.3 7.7 25 10-34 10-34 (112)
43 2xpi_A Anaphase-promoting comp 33.3 2.2E+02 0.0074 24.0 13.5 25 10-34 411-435 (597)
44 1tdp_A Carnobacteriocin B2 imm 32.4 1.2E+02 0.0043 21.7 6.0 66 48-131 10-82 (111)
45 1hxi_A PEX5, peroxisome target 32.1 96 0.0033 20.8 5.4 45 7-55 52-96 (121)
46 4abn_A Tetratricopeptide repea 31.5 2.4E+02 0.0081 23.9 13.0 58 7-69 103-161 (474)
47 1iwp_G Glycerol dehydratase ga 31.4 1.3E+02 0.0043 22.6 6.0 61 5-74 50-110 (141)
48 3vtx_A MAMA; tetratricopeptide 31.2 1.3E+02 0.0045 20.8 6.8 25 10-34 111-135 (184)
49 2kc7_A BFR218_protein; tetratr 31.1 96 0.0033 19.2 5.8 55 9-68 3-58 (99)
50 2vyi_A SGTA protein; chaperone 30.9 1E+02 0.0035 19.4 6.1 62 7-73 47-108 (131)
51 2crb_A Nuclear receptor bindin 30.1 1.4E+02 0.0049 20.9 7.8 28 18-59 27-54 (97)
52 1elw_A TPR1-domain of HOP; HOP 29.8 1E+02 0.0034 19.0 6.3 30 6-35 4-33 (118)
53 1elr_A TPR2A-domain of HOP; HO 29.0 1.1E+02 0.0038 19.3 6.0 28 8-35 81-108 (131)
54 2pl2_A Hypothetical conserved 27.8 1.8E+02 0.0062 21.3 15.1 58 7-69 6-63 (217)
55 3q49_B STIP1 homology and U bo 27.7 1.3E+02 0.0044 19.6 6.6 30 6-35 9-38 (137)
56 1xi4_A Clathrin heavy chain; a 27.2 2.3E+02 0.0078 29.4 8.8 17 169-185 1284-1300(1630)
57 2pl2_A Hypothetical conserved 27.2 1.9E+02 0.0064 21.3 6.9 47 7-57 40-86 (217)
58 4eqf_A PEX5-related protein; a 26.0 2.3E+02 0.008 22.0 11.3 58 7-69 66-123 (365)
59 3urz_A Uncharacterized protein 25.8 1.9E+02 0.0066 21.0 6.8 55 12-71 60-114 (208)
60 2y4t_A DNAJ homolog subfamily 24.4 2.7E+02 0.0093 22.2 12.2 35 150-185 311-349 (450)
61 2w2u_A Hypothetical P60 katani 24.0 97 0.0033 20.7 4.0 27 8-34 21-47 (83)
62 4fhn_B Nucleoporin NUP120; pro 23.7 1.6E+02 0.0054 28.6 6.9 60 10-71 903-964 (1139)
63 3iyk_A VP5; icosahedral virus; 23.4 3.8E+02 0.013 24.2 8.7 74 19-95 120-199 (526)
64 3fp2_A TPR repeat-containing p 23.1 3.1E+02 0.011 22.4 13.1 59 7-70 311-369 (537)
65 3cv0_A Peroxisome targeting si 22.1 2.5E+02 0.0086 21.0 11.7 28 8-35 23-50 (327)
66 2xev_A YBGF; tetratricopeptide 22.0 1.6E+02 0.0056 18.8 9.2 59 9-69 5-63 (129)
67 2r5s_A Uncharacterized protein 21.8 2.1E+02 0.0072 20.0 6.8 30 6-35 108-137 (176)
68 2ho1_A Type 4 fimbrial biogene 21.8 2.3E+02 0.0079 20.5 11.4 57 8-69 39-95 (252)
69 1ya0_A SMG-7 transcript varian 21.3 3.4E+02 0.012 24.0 8.1 25 130-164 158-182 (497)
70 1ccd_A Clara cell 17 KD protei 21.1 77 0.0026 21.0 3.0 65 101-181 4-69 (77)
71 2v6y_A AAA family ATPase, P60 20.3 1.3E+02 0.0043 20.0 4.0 27 8-34 13-39 (83)
72 3flv_A Acyl-COA-binding domain 20.2 2.5E+02 0.0085 20.2 7.4 38 19-58 25-62 (119)
73 3gyz_A Chaperone protein IPGC; 20.1 2.4E+02 0.0082 20.0 10.4 44 7-54 37-80 (151)
No 1
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=100.00 E-value=4.3e-74 Score=479.80 Aligned_cols=180 Identities=51% Similarity=0.776 Sum_probs=174.4
Q ss_pred CcHHhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHHHHhhhhhcccchhh
Q 029855 4 PTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEH 83 (186)
Q Consensus 4 ~~re~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqke~~~~~~~~ 83 (186)
.+|++++|+|||||||||||||+++||++++. + ++||.||||||||||||+||++|+|||+|+++||+++.+|++.+
T Consensus 6 ~~re~~v~~AklaeqaeRyddM~~~mk~v~~~-~--~eLs~EERnLLSvaYKNvig~rR~swRiissieqke~~~~~~~~ 82 (236)
T 3iqu_A 6 MERASLIQKAKLAEQAERYEDMAAFMKGAVEK-G--EELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEK 82 (236)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT-C--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCC
T ss_pred ccHHHHHHHHHHHHHhccHHHHHHHHHHHHhc-C--CcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCCHHH
Confidence 37999999999999999999999999999986 3 89999999999999999999999999999999999988888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCchHhHHhhhhcccchhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 029855 84 VSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQVI 163 (186)
Q Consensus 84 ~~~i~~yr~kie~EL~~~C~eii~lid~~Lip~~~~~eskvFy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~ 163 (186)
++.+++||++|++||..+|++||+|||++|||++++++++|||+|||||||||+|||..|++|++++++|++||++|+++
T Consensus 83 ~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~i 162 (236)
T 3iqu_A 83 GPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDI 162 (236)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcC------------chhhHHHHHcCChhhhcC
Q 029855 164 SNLDL------------LYNPFFFLRLNRIHQVIK 186 (186)
Q Consensus 164 a~~~L------------N~SVF~yEi~~~~~~A~~ 186 (186)
|+.+| |||||||||+|+|++||+
T Consensus 163 A~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~ 197 (236)
T 3iqu_A 163 SKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAIS 197 (236)
T ss_dssp HHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHH
T ss_pred HHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 98765 999999999999999994
No 2
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=100.00 E-value=9.5e-74 Score=480.44 Aligned_cols=181 Identities=48% Similarity=0.747 Sum_probs=170.8
Q ss_pred CCcHHhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHHHHhhhhhcccchh
Q 029855 3 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (186)
Q Consensus 3 ~~~re~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqke~~~~~~~ 82 (186)
|.+|++++|+|||||||||||||+++||+++++ + ++||.||||||||||||+||++|+|||+|+++||+++++|++.
T Consensus 1 m~~re~lv~~AklaeqaeRyddM~~~Mk~v~~~-~--~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~ 77 (248)
T 3uzd_A 1 MVDREQLVQKARLAEQAERYDDMAAAMKNVTEL-N--EPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEK 77 (248)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT-C--SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC
T ss_pred CCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-C--CcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHH
Confidence 347999999999999999999999999999986 3 8999999999999999999999999999999999998888889
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCC--chHhHHhhhhcccchhhhhhccchhHHHHHHHHHHHHHHH
Q 029855 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAG--ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAA 160 (186)
Q Consensus 83 ~~~~i~~yr~kie~EL~~~C~eii~lid~~Lip~~~~~--eskvFy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A 160 (186)
+++.+++||++|++||..+|++||+|||++|||.++++ +++|||+|||||||||+|||..|++|++++++|++||++|
T Consensus 78 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A 157 (248)
T 3uzd_A 78 KIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEA 157 (248)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHhcC------------chhhHHHHHcCChhhhcC
Q 029855 161 QVISNLDL------------LYNPFFFLRLNRIHQVIK 186 (186)
Q Consensus 161 ~~~a~~~L------------N~SVF~yEi~~~~~~A~~ 186 (186)
+++|+.+| |||||||||+|+|++||+
T Consensus 158 ~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~ 195 (248)
T 3uzd_A 158 HEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACH 195 (248)
T ss_dssp HHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred HHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 99998765 999999999999999994
No 3
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=100.00 E-value=1.7e-73 Score=480.99 Aligned_cols=181 Identities=56% Similarity=0.884 Sum_probs=174.2
Q ss_pred CCcHHhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHHHHhhhhhcccchh
Q 029855 3 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (186)
Q Consensus 3 ~~~re~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqke~~~~~~~ 82 (186)
|.+|++++|+|||||||||||||+++||+++++ + ++||.||||||||||||+||+||+|||+|+++||+++.+|++.
T Consensus 28 m~~re~lv~~AKLaeqaeRYddMv~~MK~v~~~-~--~eLt~EERNLLSvAYKNvIgarR~swRiissieqkee~~g~~~ 104 (261)
T 3ubw_A 28 MDDREDLVYQAKLAEQAERYDEMVESMKKVAGM-D--VELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGED 104 (261)
T ss_dssp --CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT-C--SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred hhhHHHHHHHHHHHHHhccHHHHHHHHHHHHhc-C--CcCCHHHHHHHHHHHHhccCCchhHHHHHhHHHHhhhccccHH
Confidence 457999999999999999999999999999986 3 8999999999999999999999999999999999999889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCchHhHHhhhhcccchhhhhhccchhHHHHHHHHHHHHHHHHH
Q 029855 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQV 162 (186)
Q Consensus 83 ~~~~i~~yr~kie~EL~~~C~eii~lid~~Lip~~~~~eskvFy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 162 (186)
+++.+++||++|++||..+|++||+|||++|||++++++++|||+|||||||||+|||..|++|+++++.|++||++|++
T Consensus 105 ~~~~i~~yr~kIe~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~~ 184 (261)
T 3ubw_A 105 KLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASD 184 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcC------------chhhHHHHHcCChhhhcC
Q 029855 163 ISNLDL------------LYNPFFFLRLNRIHQVIK 186 (186)
Q Consensus 163 ~a~~~L------------N~SVF~yEi~~~~~~A~~ 186 (186)
+|+.+| |||||||||+|+|++||+
T Consensus 185 iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~ 220 (261)
T 3ubw_A 185 IAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACR 220 (261)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred HHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 998765 999999999999999994
No 4
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=100.00 E-value=6.1e-72 Score=467.09 Aligned_cols=181 Identities=56% Similarity=0.884 Sum_probs=173.6
Q ss_pred CCcHHhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHHHHhhhhhcccchh
Q 029855 3 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (186)
Q Consensus 3 ~~~re~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqke~~~~~~~ 82 (186)
|++|++++|+||||+||||||||+++||++++. + ++||.||||||||||||+||++|+|||+|+++||+++++|++.
T Consensus 2 m~~re~~v~~AklaeqaeRyddm~~~mk~v~~~-~--~eLt~EERnLLsvayKnvig~rR~swRiissieqk~~~k~~~~ 78 (234)
T 2br9_A 2 MDDREDLVYQAKLAEQAERYDEMVESMKKVAGM-D--VELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGED 78 (234)
T ss_dssp --CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT-C--SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred cchHHHHHHHHHHHHHHhCHHHHHHHHHHHhcc-c--CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchH
Confidence 457999999999999999999999999999986 3 8999999999999999999999999999999999998888889
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCchHhHHhhhhcccchhhhhhccchhHHHHHHHHHHHHHHHHH
Q 029855 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQV 162 (186)
Q Consensus 83 ~~~~i~~yr~kie~EL~~~C~eii~lid~~Lip~~~~~eskvFy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 162 (186)
+++.+++||++|++||..+|++||++||++|||.+++++++|||+|||||||||+|||..|++|++++++|++||++|++
T Consensus 79 ~~~~i~~yr~kie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~ 158 (234)
T 2br9_A 79 KLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASD 158 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcC------------chhhHHHHHcCChhhhcC
Q 029855 163 ISNLDL------------LYNPFFFLRLNRIHQVIK 186 (186)
Q Consensus 163 ~a~~~L------------N~SVF~yEi~~~~~~A~~ 186 (186)
+|+.+| |||||||||+|+|++||+
T Consensus 159 iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~ 194 (234)
T 2br9_A 159 IAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACR 194 (234)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred HHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 998765 999999999999999994
No 5
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=100.00 E-value=8.4e-71 Score=465.77 Aligned_cols=182 Identities=64% Similarity=0.969 Sum_probs=174.3
Q ss_pred CcHHhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHHHHhhhhhcccchhh
Q 029855 4 PTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEH 83 (186)
Q Consensus 4 ~~re~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqke~~~~~~~~ 83 (186)
++|++++|+||||+||||||||+++||++++.. .+++||.||||||||||||+||++|+|||+|+++||+++.+|++.+
T Consensus 6 ~~re~~v~~AkLaeqaeRyddm~~~mk~v~~~~-~~~eLt~EERnLLSvaYKNvig~rR~swRiissieqke~~k~~~~~ 84 (260)
T 1o9d_A 6 TAREENVYMAKLAEQAERYEEMVEFMEKVSNSL-GSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEH 84 (260)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTC-SSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHccC-CCCCCCHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhhccCcHHH
Confidence 479999999999999999999999999999852 1279999999999999999999999999999999999988888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCchHhHHhhhhcccchhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 029855 84 VSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQVI 163 (186)
Q Consensus 84 ~~~i~~yr~kie~EL~~~C~eii~lid~~Lip~~~~~eskvFy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~ 163 (186)
++.|++||++|++||..+|++||+|||++|||.+++++++|||+|||||||||+|||..|++|++++++|++||++|+++
T Consensus 85 ~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~i 164 (260)
T 1o9d_A 85 VNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDI 164 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcC------------chhhHHHHHcCChhhhcC
Q 029855 164 SNLDL------------LYNPFFFLRLNRIHQVIK 186 (186)
Q Consensus 164 a~~~L------------N~SVF~yEi~~~~~~A~~ 186 (186)
|+.+| |||||||||+|+|++||+
T Consensus 165 A~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~ 199 (260)
T 1o9d_A 165 ATTELAPTHPIRLGLALNFSVFYYEILNSPDRACN 199 (260)
T ss_dssp HHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred HHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHH
Confidence 98765 999999999999999994
No 6
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=100.00 E-value=1.5e-70 Score=464.08 Aligned_cols=181 Identities=54% Similarity=0.893 Sum_probs=171.8
Q ss_pred cHHhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHHHHhhhhhcccchhhH
Q 029855 5 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHV 84 (186)
Q Consensus 5 ~re~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqke~~~~~~~~~ 84 (186)
+|++++|+||||+||||||||+++||++++....+++||.||||||||||||+||++|+|||+|+++||+++++|++.++
T Consensus 27 ~re~~v~~AkLaeqaeRyddmv~~mk~v~~~~~~~~eLt~EERnLLSvAyKNvIg~rR~swRiissieqke~~k~~~~~~ 106 (260)
T 2npm_A 27 ARESNVYMAKLAEQAERYDEMAKYMKDVVEARQESEELTVEERNLLSVAYKNAVGSRRSSWRIISSVEQKEHSRNAEDAS 106 (260)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhccCcHHHH
Confidence 59999999999999999999999999999752011699999999999999999999999999999999999888888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCchHhHHhhhhcccchhhhhhccchhHHHHHHHHHHHHHHHHHHH
Q 029855 85 SLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQVIS 164 (186)
Q Consensus 85 ~~i~~yr~kie~EL~~~C~eii~lid~~Lip~~~~~eskvFy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a 164 (186)
+.|++||++|++||..+|++||+|||++|||.+++++++|||+|||||||||+|||..|++|++++++|++||++|+++|
T Consensus 107 ~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA 186 (260)
T 2npm_A 107 KMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDATVVA 186 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcC------------chhhHHHHHcCChhhhcC
Q 029855 165 NLDL------------LYNPFFFLRLNRIHQVIK 186 (186)
Q Consensus 165 ~~~L------------N~SVF~yEi~~~~~~A~~ 186 (186)
.+| |||||||||+|+|++||+
T Consensus 187 -~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~ 219 (260)
T 2npm_A 187 -KDLEPTHPIRLGLALNFSVFHYEILNEPRAAID 219 (260)
T ss_dssp -TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred -HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 765 999999999999999994
No 7
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=100.00 E-value=1.8e-69 Score=448.83 Aligned_cols=169 Identities=22% Similarity=0.269 Sum_probs=161.7
Q ss_pred cHHhHH---HHHHHHHHhcCHHHHHHHHHHHhh----cCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHHHHhhhhhc
Q 029855 5 TREQYV---YLAKLAEQAERYEEMVKFMDSLVT----SSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEG 77 (186)
Q Consensus 5 ~re~~~---~~Aklaeq~ery~dm~~~mk~~~~----~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqke~~ 77 (186)
+|++++ |+|||||||||||||+++||++++ + + ++||.||||||||||||+||++|+|||+|+++||++
T Consensus 2 ~re~~v~~~~~AKlaeqaeRyddM~~~mk~v~~~~~~~-~--~eLt~EERnLLSvAYKNvig~rR~swRiissiEqke-- 76 (227)
T 2o8p_A 2 EMDERLLQKYRAQVFEWGGCFDKMFEALKSLIYLSEFE-N--SEFDDEERHLLTLCIKHKISDYRTMTSQVLQEQTKQ-- 76 (227)
T ss_dssp -CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-T--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcc-C--CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHH--
Confidence 488999 999999999999999999999998 5 3 899999999999999999999999999999999998
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCchHhHHhhhhcccchhhhhhccchhHHHHHHHHHHHH
Q 029855 78 RKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSY 157 (186)
Q Consensus 78 ~~~~~~~~~i~~yr~kie~EL~~~C~eii~lid~~Lip~~~~~eskvFy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY 157 (186)
+|++.+++++++||++|++||..+|++|+++||++|||++ +++|||+|||||||||+|||..|+ +++|++||
T Consensus 77 k~~~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a---EskVFY~KMKGDYyRYlAE~~~g~-----~e~a~~aY 148 (227)
T 2o8p_A 77 LNNDELVKICSEYVFSLRKDIKAFLQSFEDCVDRLVEKSF---FSKFFKLKVKSDISRYKLEFGLCS-----LEDSKKIH 148 (227)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSH---HHHHHHHHHHHHHHHHHHHTTSSC-----HHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhccCcH---HHHHHHHHHhhhHHHHHHHHcccc-----HHHHHHHH
Confidence 6788899999999999999999999999999999999998 999999999999999999999998 89999999
Q ss_pred HHHHHHHHhcC------------chhhHHHHHcCChhhhcC
Q 029855 158 KAAQVISNLDL------------LYNPFFFLRLNRIHQVIK 186 (186)
Q Consensus 158 ~~A~~~a~~~L------------N~SVF~yEi~~~~~~A~~ 186 (186)
++|+++|+++| |||||||||+|+|++||+
T Consensus 149 ~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~ 189 (227)
T 2o8p_A 149 QDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFN 189 (227)
T ss_dssp HHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHH
T ss_pred HHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHH
Confidence 99999998765 999999999999999994
No 8
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=100.00 E-value=9.6e-70 Score=459.34 Aligned_cols=175 Identities=22% Similarity=0.333 Sum_probs=146.5
Q ss_pred cHHhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHHHHhhhh-hcccc-hh
Q 029855 5 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKE-EGRKN-EE 82 (186)
Q Consensus 5 ~re~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqke-~~~~~-~~ 82 (186)
+|++++|+|||||||||||||+++| +++ + ++||.||||||||||||+||++|+|||+|+++||++ +.+|+ +.
T Consensus 28 ~r~~lv~~AKLaeqaeRYddMv~~M---~e~-~--~eLs~EERNLLSvAYKNvIgarR~swRiissieqke~e~kg~~~~ 101 (268)
T 3efz_A 28 KLSEGAYRAKLADMVGNYKDVIKVL---TES-S--DFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNNE 101 (268)
T ss_dssp ------------------CHHHHHH---TC--------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHH---Hhc-C--CcCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHhhhccCChHH
Confidence 5999999999999999999999999 655 3 899999999999999999999999999999999999 77788 88
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCchHhHHhhhhcccchhhhhhccchhHHHHHHHHHHHHHHHHH
Q 029855 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQV 162 (186)
Q Consensus 83 ~~~~i~~yr~kie~EL~~~C~eii~lid~~Lip~~~~~eskvFy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 162 (186)
+++.+++||++|++||..+|++||+|||++|||.++++ ++|||+|||||||||+|||..|++|++++++|++||++|++
T Consensus 102 ~~~~i~~yr~kie~EL~~iC~diL~llD~~Lip~a~~~-skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~e 180 (268)
T 3efz_A 102 FIQVIEDIKRDFEESILLESEDVIRIIDDNLLMYSEEG-ARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQ 180 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCCHH-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHhcC--------------chhhHHHHHcCChhhhcC
Q 029855 163 ISNLDL--------------LYNPFFFLRLNRIHQVIK 186 (186)
Q Consensus 163 ~a~~~L--------------N~SVF~yEi~~~~~~A~~ 186 (186)
+|+++| |||||||||+|+|++||+
T Consensus 181 iA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~ 218 (268)
T 3efz_A 181 RERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMK 218 (268)
T ss_dssp HHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred HHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 997644 999999999999999994
No 9
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=78.71 E-value=9.6 Score=28.08 Aligned_cols=50 Identities=22% Similarity=0.157 Sum_probs=37.7
Q ss_pred cCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHH
Q 029855 20 ERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (186)
Q Consensus 20 ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~ 69 (186)
+|.|..|+.+|.-+...--|.+||.|-|.=|.---|...-.-|-|.|.+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~plTEERRKeLVK~akk~aEeaKVAIRNIR 60 (121)
T 3lf9_A 11 ERMDKSVEALKNNLSKVRTGGGGTEERRKDLVKIVRGEAEGGRVAVRNIA 60 (121)
T ss_dssp HHHHHHHHHHHHHHHHCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 67788888888766332235899999999888888887777777777763
No 10
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=61.40 E-value=42 Score=27.60 Aligned_cols=35 Identities=14% Similarity=0.189 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHh-------cCchhhHHHHHcCChhhhc
Q 029855 151 ENTMLSYKAAQVISNL-------DLLYNPFFFLRLNRIHQVI 185 (186)
Q Consensus 151 ~~a~~aY~~A~~~a~~-------~LN~SVF~yEi~~~~~~A~ 185 (186)
+.|...|++|+++... .+++..+.+.-+++.++|+
T Consensus 351 ~~A~~~~~kaL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai 392 (472)
T 4g1t_A 351 EEAEYYFQKEFSKELTPVAKQLLHLRYGNFQLYQMKCEDKAI 392 (472)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTSSCHHHHH
T ss_pred HHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 4577778887764211 1255556655667777664
No 11
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=59.64 E-value=54 Score=24.75 Aligned_cols=63 Identities=21% Similarity=0.146 Sum_probs=45.3
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhh---------hchhhhHHHHHHHHhh
Q 029855 10 VYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNV---------IGSLRAAWRIISSIEQ 73 (186)
Q Consensus 10 ~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~---------i~~~R~s~R~l~~ieq 73 (186)
..+|.+..+.|+|++++...++++... ++.+...+-...+..+|-+. .+....|...+..+.+
T Consensus 152 ~~la~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~ 223 (261)
T 3qky_A 152 YEAARLYERRELYEAAAVTYEAVFDAY-PDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQ 223 (261)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC-TTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHC-CCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHH
Confidence 678999999999999999999999753 23445666777778888654 2445556666654433
No 12
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=59.54 E-value=36 Score=27.52 Aligned_cols=53 Identities=9% Similarity=0.110 Sum_probs=30.2
Q ss_pred hHhHHhhhhcccchhhhhhccchhHHHHHHHHHHHHHHHHHHHHhc----------CchhhHHHHHcCChhhhc
Q 029855 122 SKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQVISNLD----------LLYNPFFFLRLNRIHQVI 185 (186)
Q Consensus 122 skvFy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~----------LN~SVF~yEi~~~~~~A~ 185 (186)
-..+|+-.+|.++...-. -+.|...|++|+.++... .|.+..|+. ++++++|+
T Consensus 101 l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~-~~~~~~A~ 163 (383)
T 3ulq_A 101 LEYYFNFFRGMYELDQRE----------YLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYY-MKQTYFSM 163 (383)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHH-cCCHHHHH
Confidence 345666677777644322 345677788887765431 144544443 66666664
No 13
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=57.57 E-value=56 Score=24.30 Aligned_cols=15 Identities=7% Similarity=0.091 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHH
Q 029855 150 AENTMLSYKAAQVIS 164 (186)
Q Consensus 150 ~~~a~~aY~~A~~~a 164 (186)
.+.|...|++|+++.
T Consensus 237 ~~~A~~~~~~al~~~ 251 (272)
T 3u4t_A 237 KVKADAAWKNILALD 251 (272)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcC
Confidence 467788888888754
No 14
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=55.76 E-value=22 Score=28.57 Aligned_cols=69 Identities=17% Similarity=0.137 Sum_probs=43.2
Q ss_pred CCCCHHHHHHHHhhHhhhhchhhhHHHHHHH--Hhh--hhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 029855 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISS--IEQ--KEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (186)
Q Consensus 40 ~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~--ieq--ke~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lid~~L 113 (186)
|+||.|-|.=|...-|...-.-|.|.|.+.. ... +.+..+ .+-++-.++.+++|..+.++-+.-||..|
T Consensus 127 P~LTeErRkelvK~ak~~~E~aKvaIRniRrda~~~lKk~~K~~-----~isEDe~k~~e~eiQklTd~~i~~iD~~l 199 (209)
T 4gfq_A 127 PALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAG-----EITEDDLRGYTEDIQKETDKYIAKVDEIA 199 (209)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999998888888888888887742 111 100000 11233445566677777777777666543
No 15
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=55.72 E-value=24 Score=19.39 Aligned_cols=26 Identities=23% Similarity=0.461 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 029855 85 SLVKDYRSKVESELSDVCGSILKLLD 110 (186)
Q Consensus 85 ~~i~~yr~kie~EL~~~C~eii~lid 110 (186)
+.+..||.+|.+.|..|-+.|-.++-
T Consensus 4 krlrkfrnkikeklkkigqkiqgllp 29 (32)
T 1lyp_A 4 KRLRKFRNKIKEKLKKIGQKIQGLLP 29 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 45678999999999999999888764
No 16
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=55.39 E-value=51 Score=23.16 Aligned_cols=58 Identities=14% Similarity=0.218 Sum_probs=39.7
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHH
Q 029855 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (186)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~ 69 (186)
.-...++.+..+-|+|++++++.+++++.. | =+.+=...+..+|-. .+....+...+.
T Consensus 6 ~iy~~lG~~~~~~g~~~~A~~~~~~al~~~---p-~~~~~~~~la~~~~~-~~~~~~a~~~~~ 63 (184)
T 3vtx_A 6 TIYMDIGDKKRTKGDFDGAIRAYKKVLKAD---P-NNVETLLKLGKTYMD-IGLPNDAIESLK 63 (184)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC---T-TCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---C-CCHHHHHHHHHHHHH-CCCHHHHHHHHH
Confidence 345678999999999999999999999762 3 345555666666644 344444544444
No 17
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=52.42 E-value=37 Score=23.86 Aligned_cols=43 Identities=21% Similarity=0.369 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHh
Q 029855 9 YVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYK 55 (186)
Q Consensus 9 ~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayK 55 (186)
.+.+|++..+.|+|++++++.+++++.. | =+.+=...|..+|.
T Consensus 34 ~~~la~~y~~~~~~~~A~~~~~~al~~~---p-~~~~a~~~lg~~~~ 76 (150)
T 4ga2_A 34 GFYFAKLYYEAKEYDLAKKYICTYINVQ---E-RDPKAHRFLGLLYE 76 (150)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC---T-TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC---C-CCHHHHHHHHHHHH
Confidence 4678999999999999999999999762 2 23444555555554
No 18
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=51.03 E-value=47 Score=21.45 Aligned_cols=58 Identities=14% Similarity=0.123 Sum_probs=40.4
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHH
Q 029855 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (186)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~ 69 (186)
.-+..+|.+..+.|+|++++.++.++++.. |. ...=...|..+|.. .+..-.+...+.
T Consensus 8 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~---p~-~~~a~~~lg~~~~~-~g~~~~A~~~~~ 65 (100)
T 3ma5_A 8 FTRYALAQEHLKHDNASRALALFEELVETD---PD-YVGTYYHLGKLYER-LDRTDDAIDTYA 65 (100)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS---TT-CTHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CC-cHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 456788999999999999999999999762 33 33455666777644 344444444443
No 19
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=49.61 E-value=26 Score=24.97 Aligned_cols=50 Identities=16% Similarity=0.254 Sum_probs=36.4
Q ss_pred cCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhc----------------hhhhHHHHHHHH
Q 029855 20 ERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIG----------------SLRAAWRIISSI 71 (186)
Q Consensus 20 ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~----------------~~R~s~R~l~~i 71 (186)
++|+.+++.++.+-... ...++.+++-.|-.-||.+.. .+..||..+..+
T Consensus 10 ~~F~~A~~~vk~l~~~g--~~~ps~e~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gm 75 (106)
T 2wh5_A 10 KQFQAAVSVIQNLPKNG--SYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGKM 75 (106)
T ss_dssp HHHHHHHHHHHHSCSSC--SCCCCHHHHHHHHHHHHHHHHCSCCSCCCCTTCHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHhccccC--CCCCCHHHHHHHHHHHhhhccCCCCCCCCCcccHHHHHHHHHHHHhcCC
Confidence 67999999998865321 247899999999999998753 256778777533
No 20
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=49.09 E-value=36 Score=26.63 Aligned_cols=67 Identities=19% Similarity=0.270 Sum_probs=42.5
Q ss_pred CCCCHHHHHHHHhhHhhhhchhhhHHHHHHH-----HhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 029855 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISS-----IEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSH 112 (186)
Q Consensus 40 ~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~-----ieqke~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lid~~ 112 (186)
|+||.|-|.=|.-.-|...-.-|.+.|.+.. +...++. | .+-++-.++.+++|..+.+.-+.-||..
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~-~-----~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1dd5_A 103 PSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKIKEDQKE-G-----LIPEDDAKRLENEIQKLTDEFIEKLDEV 174 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-T-----SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-C-----CCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999998888888878888887742 1110100 0 1123444556666777766666666654
No 21
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=48.85 E-value=52 Score=21.35 Aligned_cols=59 Identities=10% Similarity=0.065 Sum_probs=42.1
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHH
Q 029855 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (186)
Q Consensus 6 re~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~ 69 (186)
-.-+..+|.+....|+|++.+.++++++... + -..+-...|..+|.. .|....+...+.
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~---p-~~~~~~~~la~~~~~-~g~~~~A~~~~~ 77 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALDFD---P-TYSVAWKWLGKTLQG-QGDRAGARQAWE 77 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---T-TCHHHHHHHHHHHHH-HTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHC---C-CcHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 3456778999999999999999999999752 3 335555667777755 455555655554
No 22
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=48.29 E-value=80 Score=23.42 Aligned_cols=27 Identities=11% Similarity=0.197 Sum_probs=15.9
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhc
Q 029855 9 YVYLAKLAEQAERYEEMVKFMDSLVTS 35 (186)
Q Consensus 9 ~~~~Aklaeq~ery~dm~~~mk~~~~~ 35 (186)
+..++.+....|+|++++.++++++..
T Consensus 77 ~~~lg~~~~~~~~~~~A~~~~~~a~~~ 103 (272)
T 3u4t_A 77 FEYYGKILMKKGQDSLAIQQYQAAVDR 103 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhc
Confidence 345556666666666666666666543
No 23
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=47.29 E-value=91 Score=23.63 Aligned_cols=57 Identities=7% Similarity=-0.010 Sum_probs=30.4
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHH
Q 029855 8 QYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (186)
Q Consensus 8 ~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~ 69 (186)
-+..+|.+..+.|+|++++...++++... +. +..-...++.+|-. .+..-.+...+.
T Consensus 127 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~---~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~ 183 (330)
T 3hym_B 127 AWIAYGHSFAVESEHDQAMAAYFTAAQLM---KG-CHLPMLYIGLEYGL-TNNSKLAERFFS 183 (330)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHT---TT-CSHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhc---cc-cHHHHHHHHHHHHH-HhhHHHHHHHHH
Confidence 34566777777777777777777776542 22 22333334444433 333344444443
No 24
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=47.01 E-value=38 Score=26.49 Aligned_cols=67 Identities=16% Similarity=0.245 Sum_probs=41.6
Q ss_pred CCCCHHHHHHHHhhHhhhhchhhhHHHHHHH-----HhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 029855 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISS-----IEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSH 112 (186)
Q Consensus 40 ~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~-----ieqke~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lid~~ 112 (186)
|+||.|-|.=|.-.-|...-.-|.+.|.+.. +...++. | .+-++-.++.+++|..+.+.-+.-||..
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~-~-----~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1ise_A 103 PPLTEERRKDLTKIVRGEAEQARVAVRNVGRDANDKVKALLKD-K-----EISEDDDRRSQDDVQKLTDAAIKKIEAA 174 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-S-----SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-C-----CCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999998888888777888887732 1111110 0 1123344456666666666666666654
No 25
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=46.24 E-value=40 Score=26.36 Aligned_cols=67 Identities=22% Similarity=0.216 Sum_probs=42.3
Q ss_pred CCCCHHHHHHHHhhHhhhhchhhhHHHHHHH-----HhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 029855 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISS-----IEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSH 112 (186)
Q Consensus 40 ~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~-----ieqke~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lid~~ 112 (186)
|+||.|-|.=|.-.-|...-.-|.+.|.+.. +...+. .| .+-++-.++.+++|..+.+.-+.-||..
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K-~~-----~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1is1_A 103 PPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLK-DK-----EISEDEDRKAQEEIQKLTDVAVKKIDEV 174 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cC-----CCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999998888888777888887732 111111 00 1123344456666666666666666654
No 26
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6 2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J 3j0e_G
Probab=44.76 E-value=38 Score=26.51 Aligned_cols=73 Identities=22% Similarity=0.203 Sum_probs=44.0
Q ss_pred CCCCHHHHHHHHhhHhhhhchhhhHHHHHHHHhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 029855 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (186)
Q Consensus 40 ~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqke~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lid~~L 113 (186)
|+||.|-|.=|.-.-|...-.-|.+.|.+..--.+. -+.......+-++-.++.+++|..+.+.-+.-||..|
T Consensus 104 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~-lKk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 176 (185)
T 1eh1_A 104 PPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDK-LKKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLA 176 (185)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999888888888888888774210000 0000000012234445667777777777777776543
No 27
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=44.72 E-value=44 Score=26.14 Aligned_cols=67 Identities=18% Similarity=0.168 Sum_probs=41.0
Q ss_pred CCCCHHHHHHHHhhHhhhhchhhhHHHHHHH-----HhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 029855 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISS-----IEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSH 112 (186)
Q Consensus 40 ~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~-----ieqke~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lid~~ 112 (186)
|+||.|-|.=|.-.-|...-.-|.+.|.+.. +...+. .| .+-++-.++.+++|..+.+.-+.-||..
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K-~~-----~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1wqg_A 103 PQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRK-EG-----EAGEDEVGRAEKDLDKTTHQYVTQIDEL 174 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cC-----CCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999988888887777888887732 111111 00 0123344455666666666666666654
No 28
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=44.44 E-value=45 Score=22.80 Aligned_cols=60 Identities=8% Similarity=0.000 Sum_probs=44.6
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHHHH
Q 029855 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSI 71 (186)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~i 71 (186)
.-+..+|.+..+.|+|++++....++++.. +=+.+=...+..+|.. .+..-.|...+...
T Consensus 48 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~----p~~~~a~~~lg~~~~~-~~~~~~A~~~~~~a 107 (126)
T 4gco_A 48 ILYSNRAACLTKLMEFQRALDDCDTCIRLD----SKFIKGYIRKAACLVA-MREWSKAQRAYEDA 107 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----TTCHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHhhHHHhhccHHHHHHHHHHHHHhh----hhhhHHHHHHHHHHHH-CCCHHHHHHHHHHH
Confidence 455678899999999999999999999762 3345566777777755 56677777777643
No 29
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=44.08 E-value=56 Score=26.38 Aligned_cols=55 Identities=16% Similarity=0.178 Sum_probs=31.7
Q ss_pred CchHhHHhhhhcccchhhhhhccchhHHHHHHHHHHHHHHHHHHHHhcC----------chhhHHHHHcCChhhhc
Q 029855 120 GESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQVISNLDL----------LYNPFFFLRLNRIHQVI 185 (186)
Q Consensus 120 ~eskvFy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L----------N~SVF~yEi~~~~~~A~ 185 (186)
+.-..+|+-.+|.++...-. -+.|...|++|..++...- |.+..|+ .++++++|+
T Consensus 97 ~~l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~-~~~~~~~A~ 161 (378)
T 3q15_A 97 GLLKYYSLFFRGMYEFDQKE----------YVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYY-HMKQTHVSM 161 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHH-HTTCHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHCC----------HHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHH-HcCCcHHHH
Confidence 34455666777877654322 3567778888887764310 4444444 366666664
No 30
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=43.98 E-value=94 Score=22.90 Aligned_cols=57 Identities=16% Similarity=0.084 Sum_probs=28.2
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHH
Q 029855 8 QYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (186)
Q Consensus 8 ~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~ 69 (186)
-+..+|.+..+.|+|++++.+.++++... |. +.+-...+..+|-. .|....+...+.
T Consensus 79 ~~~~la~~~~~~~~~~~A~~~~~~al~~~---~~-~~~~~~~la~~~~~-~g~~~~A~~~~~ 135 (275)
T 1xnf_A 79 VFNYLGIYLTQAGNFDAAYEAFDSVLELD---PT-YNYAHLNRGIALYY-GGRDKLAQDDLL 135 (275)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TT-CTHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcC---cc-ccHHHHHHHHHHHH-hccHHHHHHHHH
Confidence 34455666666666666666666666541 21 23333444444432 344444444443
No 31
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=42.42 E-value=69 Score=24.99 Aligned_cols=68 Identities=19% Similarity=0.218 Sum_probs=44.2
Q ss_pred CCCCHHHHHHHHhhHhhhhchhhhHHHHHHH--HhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 029855 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISS--IEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (186)
Q Consensus 40 ~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~--ieqke~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lid~~L 113 (186)
|+||.|-|.=|.-.-|...-.-|.+.|.+.. ...-... . ++-++-.++.+++|..+.+.-+.-||..+
T Consensus 105 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~---~---kiseD~~k~~e~~iQkltd~~i~~id~~~ 174 (184)
T 1ge9_A 105 PPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEEL---E---GISEDEKKRALERLQKLTDKYIDEINKLM 174 (184)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS---T---TCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---c---CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999998888888888888888742 1111100 0 02234445567777777777777776543
No 32
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=41.92 E-value=35 Score=22.74 Aligned_cols=29 Identities=17% Similarity=0.108 Sum_probs=20.2
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhc
Q 029855 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTS 35 (186)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~~~~~ 35 (186)
.-+++++.++.+.|+|++.+.+..++++.
T Consensus 44 rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~ 72 (93)
T 3bee_A 44 AALSLIANDHFISFRFQEAIDTWVLLLDS 72 (93)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 34566777777777777777777777654
No 33
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=40.86 E-value=74 Score=20.81 Aligned_cols=59 Identities=14% Similarity=0.170 Sum_probs=42.7
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHHH
Q 029855 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (186)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ 70 (186)
.-+..++.+..+.|+|++++.++.+++... |+ +.+=...+..+|-. .|....+...+..
T Consensus 28 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~---p~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~ 86 (117)
T 3k9i_A 28 ECYLGLGSTFRTLGEYRKAEAVLANGVKQF---PN-HQALRVFYAMVLYN-LGRYEQGVELLLK 86 (117)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TT-CHHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CC-chHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 345678899999999999999999999762 33 35566667777654 4566666666653
No 34
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=38.17 E-value=73 Score=19.92 Aligned_cols=30 Identities=23% Similarity=0.183 Sum_probs=26.0
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHhhc
Q 029855 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTS 35 (186)
Q Consensus 6 re~~~~~Aklaeq~ery~dm~~~mk~~~~~ 35 (186)
-+.+..++.+....|+|++++....+++..
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 33 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITA 33 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 356678899999999999999999999975
No 35
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=37.27 E-value=1e+02 Score=21.33 Aligned_cols=26 Identities=8% Similarity=-0.097 Sum_probs=13.5
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhc
Q 029855 10 VYLAKLAEQAERYEEMVKFMDSLVTS 35 (186)
Q Consensus 10 ~~~Aklaeq~ery~dm~~~mk~~~~~ 35 (186)
..++.+..+.|+|++.+.+..+++..
T Consensus 49 ~~l~~~~~~~g~~~~A~~~~~~al~~ 74 (164)
T 3sz7_A 49 SNRAAAYSASGQHEKAAEDAELATVV 74 (164)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 34455555555555555555555543
No 36
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=36.75 E-value=69 Score=19.23 Aligned_cols=60 Identities=17% Similarity=0.206 Sum_probs=41.7
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHHHH
Q 029855 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSI 71 (186)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~i 71 (186)
.-+..+|.+..+.|+|++.+.+.++.+... +-+.+-...++.+|-. .+....+...+...
T Consensus 10 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~----~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a 69 (91)
T 1na3_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELD----PNNAEAWYNLGNAYYK-QGDYDEAIEYYQKA 69 (91)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----TTCHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcC----CCCHHHHHHHHHHHHH-HhhHHHHHHHHHHH
Confidence 345678899999999999999999998752 2344445566666644 45666666666543
No 37
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=36.27 E-value=1.4e+02 Score=22.55 Aligned_cols=60 Identities=7% Similarity=0.013 Sum_probs=38.0
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHHHH
Q 029855 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSI 71 (186)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~i 71 (186)
+-++.+|...-..|+|++++....+++... +-+.+-...+..++ -..+....+...+...
T Consensus 23 ~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~----p~~~~~~~~~~~~~-~~~~~~~~A~~~~~~~ 82 (330)
T 3hym_B 23 DVVVSLAERHYYNCDFKMCYKLTSVVMEKD----PFHASCLPVHIGTL-VELNKANELFYLSHKL 82 (330)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHHC----TTCTTTHHHHHHHH-HHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcC----CCChhhHHHHHHHH-HHhhhHHHHHHHHHHH
Confidence 456788899999999999999999988652 22223333333444 2335555666555543
No 38
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=36.24 E-value=1e+02 Score=20.95 Aligned_cols=25 Identities=20% Similarity=0.235 Sum_probs=12.0
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhh
Q 029855 10 VYLAKLAEQAERYEEMVKFMDSLVT 34 (186)
Q Consensus 10 ~~~Aklaeq~ery~dm~~~mk~~~~ 34 (186)
..+|....+.|+|++.+..+++++.
T Consensus 22 ~~~a~~~~~~g~~~~A~~~~~~al~ 46 (142)
T 2xcb_A 22 YALGFNQYQAGKWDDAQKIFQALCM 46 (142)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHH
Confidence 3344444444555555555554443
No 39
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=35.89 E-value=98 Score=20.73 Aligned_cols=59 Identities=8% Similarity=-0.064 Sum_probs=42.5
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHHH
Q 029855 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (186)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ 70 (186)
...+.+|...-+.|+|++.+..+++++.. .+-+.+=...+..+|-. .+....|...+..
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~----~P~~~~a~~~lg~~~~~-~g~~~~A~~~~~~ 76 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQK----EPEREEAWRSLGLTQAE-NEKDGLAIIALNH 76 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHH----STTCHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHH----CCCCHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 35677888888999999999999999975 23456666777777653 4556666666643
No 40
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=35.05 E-value=96 Score=22.25 Aligned_cols=60 Identities=17% Similarity=0.144 Sum_probs=42.1
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHHHH
Q 029855 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSI 71 (186)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~i 71 (186)
.-+..+|.+..+.|+|++++.+..+++.. .+-+..=...+..+|- ..+....|...+...
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~~----~p~~~~~~~~lg~~~~-~~~~~~~A~~~~~~a 148 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLKI----DKNNVKALYKLGVANM-YFGFLEEAKENLYKA 148 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH----STTCHHHHHHHHHHHH-HHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHh----CcccHHHHHHHHHHHH-HcccHHHHHHHHHHH
Confidence 34567888888999999999999999875 2334555666677764 356666666666543
No 41
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=34.60 E-value=88 Score=21.24 Aligned_cols=59 Identities=12% Similarity=-0.038 Sum_probs=40.1
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHHH
Q 029855 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (186)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ 70 (186)
.-+..++.+..+.|+|++.+.+.++++... +-+.+-...++.+|-. .|....+...+..
T Consensus 53 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~----p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~ 111 (142)
T 2xcb_A 53 RYFLGLGACRQSLGLYEQALQSYSYGALMD----INEPRFPFHAAECHLQ-LGDLDGAESGFYS 111 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----TTCTHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhcC----CCCcHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 345677888888999999999999988752 2334445566666654 4556666666653
No 42
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=33.53 E-value=84 Score=19.28 Aligned_cols=25 Identities=16% Similarity=0.276 Sum_probs=12.8
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhh
Q 029855 10 VYLAKLAEQAERYEEMVKFMDSLVT 34 (186)
Q Consensus 10 ~~~Aklaeq~ery~dm~~~mk~~~~ 34 (186)
..+|.+..+.|+|++.+.++++++.
T Consensus 10 ~~~~~~~~~~~~~~~A~~~~~~a~~ 34 (112)
T 2kck_A 10 YLEGVLQYDAGNYTESIDLFEKAIQ 34 (112)
T ss_dssp GGHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 3444555555555555555555554
No 43
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=33.27 E-value=2.2e+02 Score=23.95 Aligned_cols=25 Identities=4% Similarity=-0.000 Sum_probs=13.9
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhh
Q 029855 10 VYLAKLAEQAERYEEMVKFMDSLVT 34 (186)
Q Consensus 10 ~~~Aklaeq~ery~dm~~~mk~~~~ 34 (186)
..++.+..+.|+++++++.+++++.
T Consensus 411 ~~l~~~~~~~g~~~~A~~~~~~~~~ 435 (597)
T 2xpi_A 411 IGFAHSFAIEGEHDQAISAYTTAAR 435 (597)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3455555555556655555555554
No 44
>1tdp_A Carnobacteriocin B2 immunity protein; four-helix bundle, antimicrobial protein; NMR {Carnobacterium maltaromaticum} SCOP: a.29.8.1
Probab=32.40 E-value=1.2e+02 Score=21.74 Aligned_cols=66 Identities=23% Similarity=0.227 Sum_probs=42.8
Q ss_pred HHHHhhHhhhhchhhhHHHHHHHHhhhhhcccchhhHHHHHHHHHHHHH-H----HHHHHHHHHHHHhhccCCCCC-CCc
Q 029855 48 NLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVES-E----LSDVCGSILKLLDSHLVPSAT-AGE 121 (186)
Q Consensus 48 nLlsvayKn~i~~~R~s~R~l~~ieqke~~~~~~~~~~~i~~yr~kie~-E----L~~~C~eii~lid~~Lip~~~-~~e 121 (186)
++||+||+. ++.+.++.-.+.|-.+-+++.+ + ...+|.-.-..|-++++-+.. -|+
T Consensus 10 ~~lS~AY~D------------------peVk~~p~Lr~~lf~~Ak~L~~~~d~~~y~~V~~KLs~~IS~Y~l~hh~~~P~ 71 (111)
T 1tdp_A 10 LNLSEAYKD------------------PEVKANEFLSKLVVQCAGKLTASNSENSYIEVISLLSRGISSYYLSHKRIIPS 71 (111)
T ss_dssp HHHHHHHTC------------------HHHHSCHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHTCTTSCCCCCG
T ss_pred HHHHHHhCC------------------HhhhcCHHHHHHHHHHHHHhccCCCcchhHhHHHHHHhHHHHHHHHhcccCcH
Confidence 678888886 2233455566677777777765 3 777888888888888776654 444
Q ss_pred h-HhHHhhhhc
Q 029855 122 S-KVFYLKMKG 131 (186)
Q Consensus 122 s-kvFy~Kmkg 131 (186)
+ -..|...+.
T Consensus 72 ali~L~~~I~k 82 (111)
T 1tdp_A 72 SMLTIYTQIQK 82 (111)
T ss_dssp GGTHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 4 345555554
No 45
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=32.07 E-value=96 Score=20.76 Aligned_cols=45 Identities=11% Similarity=0.093 Sum_probs=27.0
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHh
Q 029855 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYK 55 (186)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayK 55 (186)
+-+..++.+..+.|++++.+.+.+++++.. |. +.+=...|..+|.
T Consensus 52 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~---P~-~~~~~~~la~~~~ 96 (121)
T 1hxi_A 52 EAWRSLGLTQAENEKDGLAIIALNHARMLD---PK-DIAVHAALAVSHT 96 (121)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TT-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CC-CHHHHHHHHHHHH
Confidence 345567777777777777777777777642 22 2334444444443
No 46
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=31.51 E-value=2.4e+02 Score=23.87 Aligned_cols=58 Identities=21% Similarity=0.206 Sum_probs=38.3
Q ss_pred HhHHHHHHHHHHhcCH-HHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHH
Q 029855 7 EQYVYLAKLAEQAERY-EEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (186)
Q Consensus 7 e~~~~~Aklaeq~ery-~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~ 69 (186)
.-+..+|++....|+| ++++.+++++++. .+-+.+-...|..+|-. .+....|...+.
T Consensus 103 ~~~~~lg~~~~~~g~~~~~A~~~~~~al~~----~p~~~~a~~~lg~~~~~-~g~~~~A~~~~~ 161 (474)
T 4abn_A 103 QALMLKGKALNVTPDYSPEAEVLLSKAVKL----EPELVEAWNQLGEVYWK-KGDVTSAHTCFS 161 (474)
T ss_dssp HHHHHHHHHHTSSSSCCHHHHHHHHHHHHH----CTTCHHHHHHHHHHHHH-HTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHhh----CCCCHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 4456778888888999 9999999888875 23345566666666644 244455555543
No 47
>1iwp_G Glycerol dehydratase gamma subunit; cobalamin, radical catalysis, lyase; HET: B12; 2.10A {Klebsiella pneumoniae} SCOP: a.23.2.1 PDB: 1mmf_G*
Probab=31.37 E-value=1.3e+02 Score=22.58 Aligned_cols=61 Identities=23% Similarity=0.326 Sum_probs=43.6
Q ss_pred cHHhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHHHHhhh
Q 029855 5 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQK 74 (186)
Q Consensus 5 ~re~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqk 74 (186)
+.+-|.+.|+||+.+||.. +..-+...++. ... +++|-| ..=|.+-+.|++---|..|-+.
T Consensus 50 spetL~~QaqIAe~~gr~~-~a~NfrRAAEL----t~V-PD~riL---eiYnaLRP~RSTk~ELl~iA~e 110 (141)
T 1iwp_G 50 SRQTLEYQAQIAEQMQRHA-VARNFRRAAEL----IAI-PDERIL---AIYNALRPFRSSQAELLAIADE 110 (141)
T ss_dssp CHHHHHHHHHHHHTTTCHH-HHHHHHHHHTT----TTS-CHHHHH---HHHHHHSTTSCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHH-HHHHHHHHHhc----ccC-CHHHHH---HHHHhhCCCcccHHHHHHHHHH
Confidence 4688999999999999986 66677776653 222 455544 3448899999987777665433
No 48
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=31.19 E-value=1.3e+02 Score=20.85 Aligned_cols=25 Identities=4% Similarity=0.129 Sum_probs=12.5
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhh
Q 029855 10 VYLAKLAEQAERYEEMVKFMDSLVT 34 (186)
Q Consensus 10 ~~~Aklaeq~ery~dm~~~mk~~~~ 34 (186)
..++.+..+.|+|++++++.+++++
T Consensus 111 ~~lg~~~~~~g~~~~A~~~~~~~l~ 135 (184)
T 3vtx_A 111 YKLGLVYDSMGEHDKAIEAYEKTIS 135 (184)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCchhHHHHHHHHHH
Confidence 3444455555555555555555444
No 49
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=31.13 E-value=96 Score=19.20 Aligned_cols=55 Identities=13% Similarity=0.199 Sum_probs=35.3
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHH-HHHHHHhhHhhhhchhhhHHHHH
Q 029855 9 YVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVE-ERNLLSVAYKNVIGSLRAAWRII 68 (186)
Q Consensus 9 ~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~e-ERnLlsvayKn~i~~~R~s~R~l 68 (186)
.+.+|...-+.|+|++.+...++++... +-+.. =...++.+|-. .+....|...+
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~----p~~~~~~~~~lg~~~~~-~~~~~~A~~~~ 58 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTE----PVGKDEAYYLMGNAYRK-LGDWQKALNNY 58 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHC----SSTHHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHC----CCcHHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 3567888889999999999999999752 23334 44555555543 23333444433
No 50
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=30.87 E-value=1e+02 Score=19.40 Aligned_cols=62 Identities=8% Similarity=0.012 Sum_probs=44.0
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHHHHhh
Q 029855 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQ 73 (186)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieq 73 (186)
.-+..+|.+..+.|+|++++.+..+++... +-+..-...+..+|-. .+....+...+.....
T Consensus 47 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~~~ 108 (131)
T 2vyi_A 47 VYFCNRAAAYSKLGNYAGAVQDCERAICID----PAYSKAYGRMGLALSS-LNKHVEAVAYYKKALE 108 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----TTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhchHHHHHHHHHHHhcC----ccCHHHHHHHHHHHHH-hCCHHHHHHHHHHHHh
Confidence 456678999999999999999999998752 2345555666666654 5666777777764433
No 51
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=30.05 E-value=1.4e+02 Score=20.89 Aligned_cols=28 Identities=29% Similarity=0.275 Sum_probs=20.7
Q ss_pred HhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhc
Q 029855 18 QAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIG 59 (186)
Q Consensus 18 q~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~ 59 (186)
..|||||+|++-.+.+ .+|+-|.|.+=+
T Consensus 27 ~~gkydeAIech~kAa--------------~yL~eAmkltqs 54 (97)
T 2crb_A 27 AAGKYEEAISCHRKAT--------------TYLSEAMKLTES 54 (97)
T ss_dssp HTTCHHHHHHHHHHHH--------------HHHHHHHTTCCC
T ss_pred hcCCHHHHHHHHHHHH--------------HHHHHHHHhhcc
Confidence 4599999999998876 346667776533
No 52
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=29.77 E-value=1e+02 Score=19.03 Aligned_cols=30 Identities=3% Similarity=-0.002 Sum_probs=26.1
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHhhc
Q 029855 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTS 35 (186)
Q Consensus 6 re~~~~~Aklaeq~ery~dm~~~mk~~~~~ 35 (186)
-+.+..+|.+..+.|+|++.+.++.+++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 33 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKL 33 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 356778899999999999999999999865
No 53
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=28.97 E-value=1.1e+02 Score=19.26 Aligned_cols=28 Identities=14% Similarity=0.405 Sum_probs=24.0
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhc
Q 029855 8 QYVYLAKLAEQAERYEEMVKFMDSLVTS 35 (186)
Q Consensus 8 ~~~~~Aklaeq~ery~dm~~~mk~~~~~ 35 (186)
-+..+|.+..+.|+|++++.++.+++..
T Consensus 81 ~~~~la~~~~~~~~~~~A~~~~~~~~~~ 108 (131)
T 1elr_A 81 AYARIGNSYFKEEKYKDAIHFYNKSLAE 108 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 4567888999999999999999998865
No 54
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=27.78 E-value=1.8e+02 Score=21.32 Aligned_cols=58 Identities=12% Similarity=0.111 Sum_probs=40.4
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHH
Q 029855 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (186)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~ 69 (186)
+-+..++.+..+.|+|++.+..+.+++.. .+-+.+=...+..+|-. .|....+...+.
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~----~p~~~~a~~~lg~~~~~-~g~~~~A~~~~~ 63 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALKE----NPQDPEALYWLARTQLK-LGLVNPALENGK 63 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTT----SSSCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 46678888999999999999999999865 33445556666666543 444555555554
No 55
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=27.70 E-value=1.3e+02 Score=19.58 Aligned_cols=30 Identities=10% Similarity=0.068 Sum_probs=26.6
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHhhc
Q 029855 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTS 35 (186)
Q Consensus 6 re~~~~~Aklaeq~ery~dm~~~mk~~~~~ 35 (186)
-+.+..++.+....|+|++++.++.+++..
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 38 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITR 38 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 456788999999999999999999999875
No 56
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=27.23 E-value=2.3e+02 Score=29.38 Aligned_cols=17 Identities=6% Similarity=-0.009 Sum_probs=12.1
Q ss_pred chhhHHHHHcCChhhhc
Q 029855 169 LYNPFFFLRLNRIHQVI 185 (186)
Q Consensus 169 N~SVF~yEi~~~~~~A~ 185 (186)
.--|-+|+-.|..++|+
T Consensus 1284 eeli~yYe~~G~feEAI 1300 (1630)
T 1xi4_A 1284 EELINYYQDRGYFEELI 1300 (1630)
T ss_pred HHHHHHHHHcCCHHHHH
Confidence 34566788888887775
No 57
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=27.19 E-value=1.9e+02 Score=21.26 Aligned_cols=47 Identities=21% Similarity=0.169 Sum_probs=35.5
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhh
Q 029855 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNV 57 (186)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~ 57 (186)
+-+..+|.+..+.|++++++..++++++. .+-+.+-...+..+|...
T Consensus 40 ~a~~~lg~~~~~~g~~~~A~~~~~~al~~----~P~~~~a~~~lg~~~~~~ 86 (217)
T 2pl2_A 40 EALYWLARTQLKLGLVNPALENGKTLVAR----TPRYLGGYMVLSEAYVAL 86 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH----CTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh----CCCcHHHHHHHHHHHHHh
Confidence 45677899999999999999999999976 233455566666666543
No 58
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=26.01 E-value=2.3e+02 Score=22.00 Aligned_cols=58 Identities=10% Similarity=0.032 Sum_probs=34.4
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHH
Q 029855 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (186)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~ 69 (186)
+.++.+|....+.|+|++++.+.++++... | -+.+-...+..+|-. .|....+...+.
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~---p-~~~~~~~~lg~~~~~-~g~~~~A~~~~~ 123 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTILFMEAAILQD---P-GDAEAWQFLGITQAE-NENEQAAIVALQ 123 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHHHC---T-TCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHHHhC---c-CCHHHHHHHHHHHHH-CCCHHHHHHHHH
Confidence 346777778888888888888888877642 2 234445555555543 334444444443
No 59
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=25.83 E-value=1.9e+02 Score=20.99 Aligned_cols=55 Identities=18% Similarity=0.194 Sum_probs=41.5
Q ss_pred HHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHHHH
Q 029855 12 LAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSI 71 (186)
Q Consensus 12 ~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~i 71 (186)
+|.+..+.|+|++++.+.+++++. .+=+.+-...+..+|-. .|....+...+...
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~----~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~a 114 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQK----APNNVDCLEACAEMQVC-RGQEKDALRMYEKI 114 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH----CTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHH----CCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHH
Confidence 888999999999999999999976 23345666777777753 56677777777644
No 60
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=24.39 E-value=2.7e+02 Score=22.21 Aligned_cols=35 Identities=6% Similarity=-0.023 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHhcC----chhhHHHHHcCChhhhc
Q 029855 150 AENTMLSYKAAQVISNLDL----LYNPFFFLRLNRIHQVI 185 (186)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L----N~SVF~yEi~~~~~~A~ 185 (186)
.+.|...|++|+++..... +.+.. |..+++.++|+
T Consensus 311 ~~~A~~~~~~a~~~~p~~~~~~~~l~~~-~~~~~~~~~A~ 349 (450)
T 2y4t_A 311 PVEAIRVCSEVLQMEPDNVNALKDRAEA-YLIEEMYDEAI 349 (450)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHH-HHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHH-HHHhcCHHHHH
Confidence 3556777777776532211 33332 34456666654
No 61
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=23.96 E-value=97 Score=20.72 Aligned_cols=27 Identities=19% Similarity=0.212 Sum_probs=19.5
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 029855 8 QYVYLAKLAEQAERYEEMVKFMDSLVT 34 (186)
Q Consensus 8 ~~~~~Aklaeq~ery~dm~~~mk~~~~ 34 (186)
+++-.|=-.+++|+|++.+.+.++.++
T Consensus 21 ~lv~~Ave~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 21 KYAINAVKADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 345566667788888888888777764
No 62
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=23.71 E-value=1.6e+02 Score=28.65 Aligned_cols=60 Identities=15% Similarity=0.078 Sum_probs=40.9
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhch--hhhHHHHHHHH
Q 029855 10 VYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGS--LRAAWRIISSI 71 (186)
Q Consensus 10 ~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~--~R~s~R~l~~i 71 (186)
...++|.|+.+.|+-.+++-+..++..+ ++-..-...|.+.-||..+.- .-.|.-.|.+.
T Consensus 903 ~hv~~LFe~~~~~~~vi~fa~lAi~~~~--~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~ 964 (1139)
T 4fhn_B 903 LHLSKKLFEESAYIDALEFSLLADASKE--TDDEDLSIAITHETLKTACAAGKFDAAHVALMVL 964 (1139)
T ss_dssp HHHHHHHHHTSCCHHHHHHHHHHHHHCC--SCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhcc--CCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhC
Confidence 4567899999999999999999886532 222222445777778777643 34666666544
No 63
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Probab=23.39 E-value=3.8e+02 Score=24.22 Aligned_cols=74 Identities=19% Similarity=0.420 Sum_probs=48.0
Q ss_pred hcCHHHHHHHHHHHhhcCCCCCCCCHH---HHHHHH---hhHhhhhchhhhHHHHHHHHhhhhhcccchhhHHHHHHHHH
Q 029855 19 AERYEEMVKFMDSLVTSSTPATELTVE---ERNLLS---VAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRS 92 (186)
Q Consensus 19 ~ery~dm~~~mk~~~~~~~~~~~Lt~e---ERnLls---vayKn~i~~~R~s~R~l~~ieqke~~~~~~~~~~~i~~yr~ 92 (186)
.++|.+-++-+++++.. . .....+ |-.+|- .+|..++..-+..+..|..--++|....+.....++..||.
T Consensus 120 ~~k~g~~l~~v~~~~~~-~--~~~e~~e~~q~~~LekAl~s~~~i~~~e~~~l~~L~~AL~kE~~~Rt~dE~~mi~~yr~ 196 (526)
T 3iyk_A 120 KEKFGKELEEVYNFMNG-E--ANAEIEDEKQFDILNKAVTSYNKILTEEDLQMRRLATALQKEIGERTHAETVMVKEYRD 196 (526)
T ss_pred HHHHHHHHHHHHHHHHH-h--hhhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcHHHHHHHHHHHH
Confidence 35566667777777642 1 333333 444554 35667777788888888766677765555566788888888
Q ss_pred HHH
Q 029855 93 KVE 95 (186)
Q Consensus 93 kie 95 (186)
++.
T Consensus 197 k~~ 199 (526)
T 3iyk_A 197 KID 199 (526)
T ss_pred HHH
Confidence 764
No 64
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=23.07 E-value=3.1e+02 Score=22.43 Aligned_cols=59 Identities=10% Similarity=0.058 Sum_probs=33.4
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHHH
Q 029855 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (186)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ 70 (186)
.-+..+|.+..+.|+|++.+..+++++... +. +.+-...+..+|-. .|....+...+..
T Consensus 311 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~---~~-~~~~~~~la~~~~~-~g~~~~A~~~~~~ 369 (537)
T 3fp2_A 311 PTYYHRGQMYFILQDYKNAKEDFQKAQSLN---PE-NVYPYIQLACLLYK-QGKFTESEAFFNE 369 (537)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TT-CSHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHhC---CC-CHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 345567777777778887777777777542 22 22334444444432 3444555555543
No 65
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=22.11 E-value=2.5e+02 Score=20.97 Aligned_cols=28 Identities=4% Similarity=-0.069 Sum_probs=16.0
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhc
Q 029855 8 QYVYLAKLAEQAERYEEMVKFMDSLVTS 35 (186)
Q Consensus 8 ~~~~~Aklaeq~ery~dm~~~mk~~~~~ 35 (186)
.++.+|...-+.|+|++++...++++..
T Consensus 23 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 50 (327)
T 3cv0_A 23 NPMEEGLSMLKLANLAEAALAFEAVCQA 50 (327)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 3455555555666666666666655543
No 66
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=21.98 E-value=1.6e+02 Score=18.78 Aligned_cols=59 Identities=15% Similarity=0.104 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHH
Q 029855 9 YVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (186)
Q Consensus 9 ~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~ 69 (186)
+..+|....+.|+|++.+..+++++... ++..+..+-...+..+|-. .+....|...+.
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~-p~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~ 63 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELY-PNGVYTPNALYWLGESYYA-TRNFQLAEAQFR 63 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC-SSSTTHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHC-CCCcccHHHHHHHHHHHHH-hccHHHHHHHHH
Confidence 3445555555666666666666655431 1222323444444444422 233444444443
No 67
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=21.84 E-value=2.1e+02 Score=19.97 Aligned_cols=30 Identities=23% Similarity=0.150 Sum_probs=23.1
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHhhc
Q 029855 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTS 35 (186)
Q Consensus 6 re~~~~~Aklaeq~ery~dm~~~mk~~~~~ 35 (186)
-+-+..+|.+..+.|+|++.+..+.+++..
T Consensus 108 ~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 137 (176)
T 2r5s_A 108 FELACELAVQYNQVGRDEEALELLWNILKV 137 (176)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHh
Confidence 345567788888888888888888888764
No 68
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=21.83 E-value=2.3e+02 Score=20.47 Aligned_cols=57 Identities=12% Similarity=0.026 Sum_probs=34.4
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhhchhhhHHHHHH
Q 029855 8 QYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (186)
Q Consensus 8 ~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~ 69 (186)
-+..+|.+..+.|+|++.+.++++++.. .+-+.+-...+..+|-. .+..-.+...+.
T Consensus 39 ~~~~~a~~~~~~~~~~~A~~~~~~al~~----~~~~~~~~~~la~~~~~-~~~~~~A~~~~~ 95 (252)
T 2ho1_A 39 AYIQLGLGYLQRGNTEQAKVPLRKALEI----DPSSADAHAALAVVFQT-EMEPKLADEEYR 95 (252)
T ss_dssp HHHHHHHHHHHTTCTGGGHHHHHHHHHH----CTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHhc----CCChHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 3456777778888888888888888764 22234444555555533 344445555554
No 69
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=21.26 E-value=3.4e+02 Score=24.03 Aligned_cols=25 Identities=24% Similarity=0.315 Sum_probs=21.2
Q ss_pred hcccchhhhhhccchhHHHHHHHHHHHHHHHHHHH
Q 029855 130 KGDYYRYLAEFKVGDERKAAAENTMLSYKAAQVIS 164 (186)
Q Consensus 130 kgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a 164 (186)
-||-.||.... ..|...|.+|..+.
T Consensus 158 LGDL~RY~~~~----------~~A~~~Y~~A~~~~ 182 (497)
T 1ya0_A 158 LGDIARYRNQT----------SQAESYYRHAAQLV 182 (497)
T ss_dssp HHHHHHHTTCH----------HHHHHHHHHHHHHC
T ss_pred cccHHHHHHHH----------HHHHHHHHHHHHhC
Confidence 69999999764 57889999999875
No 70
>1ccd_A Clara cell 17 KD protein; phospholipase A2 inhibitor; 3.00A {Rattus rattus} SCOP: a.101.1.1
Probab=21.11 E-value=77 Score=21.02 Aligned_cols=65 Identities=15% Similarity=0.187 Sum_probs=43.7
Q ss_pred HHHHHHHHHhhccCCCCCCCchHhHHhhhhcccchhhhhhccchhHHHHHHHHHHHHHHHHHHHHhc-CchhhHHHHHcC
Q 029855 101 VCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQVISNLD-LLYNPFFFLRLN 179 (186)
Q Consensus 101 ~C~eii~lid~~Lip~~~~~eskvFy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~-LN~SVF~yEi~~ 179 (186)
+|--+.+.|+..|.++ ++ +|--|+..|..+++-.+++.+-+++.- .+.... .|..++...|++
T Consensus 4 iCpal~~~v~~~l~~s---~~----------~Y~~~l~~y~~~~~a~eA~~~lK~C~D---~ls~e~r~~i~~~l~kI~~ 67 (77)
T 1ccd_A 4 ICPGFLQVLEALLLGS---ES----------NYEAALKPFNPASDLQNAGTQLKRLVD---TLPQETRINIVKLTEKILT 67 (77)
T ss_dssp SCHHHHHHHHHHTTSC---HH----------HHHHHHTTTCCCHHHHHHHHHHHHHHH---HSCHHHHHHHHHHHHHHTT
T ss_pred cchhHHHHHHHHhcCC---HH----------HHHHHHHhcCCCHHHHHHHHHHHHHHH---hCCHHHHHHHHHHHHHHHc
Confidence 6888888888888773 22 355778999998876666655555433 111112 288889888887
Q ss_pred Ch
Q 029855 180 RI 181 (186)
Q Consensus 180 ~~ 181 (186)
++
T Consensus 68 S~ 69 (77)
T 1ccd_A 68 SP 69 (77)
T ss_dssp ST
T ss_pred Cc
Confidence 75
No 71
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=20.32 E-value=1.3e+02 Score=19.98 Aligned_cols=27 Identities=19% Similarity=0.431 Sum_probs=19.5
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 029855 8 QYVYLAKLAEQAERYEEMVKFMDSLVT 34 (186)
Q Consensus 8 ~~~~~Aklaeq~ery~dm~~~mk~~~~ 34 (186)
+++..|--.+++|+|++++.+.+..++
T Consensus 13 ~lv~~Ave~D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 13 KYAILAVKADKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 355666667788888888887777663
No 72
>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens}
Probab=20.19 E-value=2.5e+02 Score=20.22 Aligned_cols=38 Identities=26% Similarity=0.264 Sum_probs=30.1
Q ss_pred hcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhHhhhh
Q 029855 19 AERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVI 58 (186)
Q Consensus 19 ~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvayKn~i 58 (186)
-++|+.++..++.+-... ...++.+++-.|=.-||.+.
T Consensus 25 e~~F~~A~~~Vk~l~~~g--~~~ps~d~~L~LYaLyKQAT 62 (119)
T 3flv_A 25 ETRFEAAVKVIQSLPKNG--SFQPTNEMMLKFYSFYKQAT 62 (119)
T ss_dssp HHHHHHHHHHHHHHHHHS--SCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcccC--CCCCCHHHHHHHHHHHHHHh
Confidence 367999999999887542 14689999999988888776
No 73
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=20.06 E-value=2.4e+02 Score=19.96 Aligned_cols=44 Identities=20% Similarity=0.061 Sum_probs=25.1
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhH
Q 029855 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAY 54 (186)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~~~~~~~~~~~Lt~eERnLlsvay 54 (186)
+-+..+|.+..+.|+|++++.+.++++.. .+-+.+=...|..+|
T Consensus 37 ~~~~~lg~~~~~~g~~~eA~~~~~~al~~----~P~~~~~~~~lg~~~ 80 (151)
T 3gyz_A 37 DDIYSYAYDFYNKGRIEEAEVFFRFLCIY----DFYNVDYIMGLAAIY 80 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH----CTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh----CCCCHHHHHHHHHHH
Confidence 34455666666667777777777666654 233344444455544
Done!