BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029863
(186 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SEU6|TRXM4_ARATH Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360
PE=1 SV=2
Length = 193
Score = 203 bits (516), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 109/196 (55%), Positives = 138/196 (70%), Gaps = 15/196 (7%)
Query: 1 MATVLECVAVPRASASSVFSSP--AKLSSSSINSISGRRK-----FAEFKGLKVRPVRSF 53
MA++L+ V V R VFS P A +SSSS RR+ F EF+GLK
Sbjct: 1 MASLLDSVTVTR-----VFSLPIAASVSSSSAAPSVSRRRISPARFLEFRGLKSSRSLVT 55
Query: 54 GSVSQGSSSSFRLRRGAQIVCEAQET---AVEVPAVTDATWQSLVLDSGSPVLVEFWAPW 110
S S G++ R+ RG +I CEAQ+T AVEVP ++D+ WQ+ VL+S PVLVEFWAPW
Sbjct: 56 QSASLGANRRTRIARGGRIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPW 115
Query: 111 CGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVI 170
CGPCRMIHPI+D+L+K + GK K YK+NTDESP+ A RYGIRS+PTV+IFK GEKKD++I
Sbjct: 116 CGPCRMIHPIVDQLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSII 175
Query: 171 GAVPKSTLTTSIEKFL 186
GAVP+ TL +IE+FL
Sbjct: 176 GAVPRETLEKTIERFL 191
>sp|Q9XGS0|TRXM_BRANA Thioredoxin M-type, chloroplastic OS=Brassica napus PE=1 SV=1
Length = 177
Score = 196 bits (498), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 95/162 (58%), Positives = 127/162 (78%), Gaps = 5/162 (3%)
Query: 25 LSSSSINSISGRRKFAEFKGLKVRPVRSFGSVSQGSSSSFRLRRGAQIVCEAQETAVEVP 84
++SS S+S R+ F+ GL+ R S SVS+ S +S RLRRG I+CEAQ+TA +P
Sbjct: 20 IASSKTVSLSTRQMFS-VGGLRTR--VSLSSVSKNSRAS-RLRRGG-IICEAQDTATGIP 74
Query: 85 AVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPS 144
V D+TW+SLVL + PV+V+FWAPWCGPC+MI PI++EL++QY GK+K +K+NTD+SP+
Sbjct: 75 MVNDSTWESLVLKADEPVVVDFWAPWCGPCKMIDPIVNELAQQYTGKIKFFKLNTDDSPA 134
Query: 145 IATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
+YG+RSIPT+MIF GEKKDT+IGAVPK+TL TSI+KFL
Sbjct: 135 TPGKYGVRSIPTIMIFVKGEKKDTIIGAVPKTTLATSIDKFL 176
>sp|O48737|TRXM1_ARATH Thioredoxin M1, chloroplastic OS=Arabidopsis thaliana GN=At1g03680
PE=1 SV=1
Length = 179
Score = 191 bits (484), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/169 (56%), Positives = 123/169 (72%), Gaps = 8/169 (4%)
Query: 21 SPAKLSSSSINSISGRRKFA---EFKGLKVRPVRSFGSVSQGSSSSFRLRRGAQIVCEAQ 77
S +++SS S S R+ F+ E GL+ R S S+S+ S S RLRRG ++CEAQ
Sbjct: 16 SEMRIASSPTGSFSTRQMFSVLPESSGLRTR--VSLSSLSKNSRVS-RLRRG--VICEAQ 70
Query: 78 ETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKV 137
+TA +P V D+TW SLVL + PV V+FWAPWCGPC+MI PI++EL+++Y G+ K YK+
Sbjct: 71 DTATGIPVVNDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKL 130
Query: 138 NTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
NTDESP+ +YG+RSIPT+MIF NGEKKDT+IGAV K TL TSI KFL
Sbjct: 131 NTDESPATPGQYGVRSIPTIMIFVNGEKKDTIIGAVSKDTLATSINKFL 179
>sp|Q6H7E4|TRXM1_ORYSJ Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os02g0639900 PE=2 SV=1
Length = 173
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/157 (57%), Positives = 115/157 (73%), Gaps = 19/157 (12%)
Query: 36 RRKFAEFKGLKVRPVRSFGSVSQGSSSSFRLR----RGAQIVCEAQ--ETAVEVPAVTDA 89
RR + +G++ PV RLR RG +VC AQ ET+ +VP VT +
Sbjct: 28 RRLLPQCRGVRAAPV-------------VRLRSGRARGVSVVCAAQGQETSFQVPDVTKS 74
Query: 90 TWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRY 149
TWQSLV++S PVLVEFWA WCGPC+MI P+I +LSK+Y GKL CYK+NTDE+P IAT++
Sbjct: 75 TWQSLVVESELPVLVEFWASWCGPCKMIDPVIGKLSKEYEGKLNCYKLNTDENPDIATQF 134
Query: 150 GIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
GIRSIPT+MIFKNGEKKD VIGAVP+STL +SI+K++
Sbjct: 135 GIRSIPTMMIFKNGEKKDAVIGAVPESTLVSSIDKYI 171
>sp|Q9SEU8|TRXM2_ARATH Thioredoxin M2, chloroplastic OS=Arabidopsis thaliana GN=At4g03520
PE=1 SV=2
Length = 186
Score = 181 bits (460), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/158 (56%), Positives = 117/158 (74%), Gaps = 12/158 (7%)
Query: 36 RRKFA---EFKGLKVR----PVRSFGSVSQGSSSSFRLRRGAQIVCEAQETAVEVPAVTD 88
RR FA E GL++R P S S+ Q S RLRR +VCEAQET ++ V D
Sbjct: 33 RRMFAVLPESSGLRIRLSLSPA-SLTSIHQPRVS--RLRRA--VVCEAQETTTDIQVVND 87
Query: 89 ATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATR 148
+TW SLVL + PV+V+FWAPWCGPC+MI P++++L++ Y GK+K YK+NTDESP+ +
Sbjct: 88 STWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQ 147
Query: 149 YGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
YG+RSIPT+MIF GEKKDT+IGAVPK+TLT+S++KFL
Sbjct: 148 YGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185
>sp|P48384|TRXM_PEA Thioredoxin M-type, chloroplastic OS=Pisum sativum PE=2 SV=1
Length = 172
Score = 180 bits (457), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 82/141 (58%), Positives = 107/141 (75%), Gaps = 2/141 (1%)
Query: 46 KVRPVRSFGSVSQGSSSSFRLRRGAQIVCEAQETAVEVPAVTDATWQSLVLDSGSPVLVE 105
K R SF ++ S +S L ++ A+E EV V D++W LV+ S +PVLV+
Sbjct: 34 KSRIQESFAELN--SFTSLVLLIENHVLLHAREAVNEVQVVNDSSWDELVIGSETPVLVD 91
Query: 106 FWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEK 165
FWAPWCGPCRMI PIIDEL+K+Y GK+KCYK+NTDESP+ AT+YGIRSIPTV+ FKNGE+
Sbjct: 92 FWAPWCGPCRMIAPIIDELAKEYAGKIKCYKLNTDESPNTATKYGIRSIPTVLFFKNGER 151
Query: 166 KDTVIGAVPKSTLTTSIEKFL 186
KD+VIGAVPK+TL+ +EK++
Sbjct: 152 KDSVIGAVPKATLSEKVEKYI 172
>sp|Q7X8R5|TRXM2_ORYSJ Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os04g0530600 PE=2 SV=2
Length = 180
Score = 179 bits (453), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 79/119 (66%), Positives = 102/119 (85%), Gaps = 2/119 (1%)
Query: 70 AQIVC--EAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQ 127
A +VC + Q+T+++VP VT +TWQSLV++S PVLV +WA WCGPC+MI P++ +LSK+
Sbjct: 60 ASVVCAVQGQDTSIQVPEVTKSTWQSLVMESELPVLVGYWATWCGPCKMIDPVVGKLSKE 119
Query: 128 YVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
Y GKLKCYK+NTDE+P IA++YG+RSIPT+MIFKNGEKKD VIGAVP+STL SIEKF+
Sbjct: 120 YEGKLKCYKLNTDENPDIASQYGVRSIPTMMIFKNGEKKDAVIGAVPESTLIASIEKFV 178
>sp|P07591|TRXM_SPIOL Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2
Length = 181
Score = 176 bits (446), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 86/146 (58%), Positives = 113/146 (77%), Gaps = 5/146 (3%)
Query: 42 FKGLKVRPVRSFGSVSQGSSSSF-RLRRGAQIVCEAQETAVEVPAVTDATWQSLVLDSGS 100
F+GLK RSF ++S SSS R R + +VC+A E EV V D++W+ VL+S
Sbjct: 38 FRGLK----RSFPALSSSVSSSSPRQFRYSSVVCKASEAVKEVQDVNDSSWKEFVLESEV 93
Query: 101 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIF 160
PV+V+FWAPWCGPC++I P+IDEL+K+Y GK+ YK+NTDE+P IAT+Y IRSIPTV+ F
Sbjct: 94 PVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFF 153
Query: 161 KNGEKKDTVIGAVPKSTLTTSIEKFL 186
KNGE+K+++IGAVPKSTLT SIEK+L
Sbjct: 154 KNGERKESIIGAVPKSTLTDSIEKYL 179
>sp|Q9ZP20|TRXM5_ORYSJ Thioredoxin M5, chloroplastic OS=Oryza sativa subsp. japonica
GN=TRXM PE=2 SV=1
Length = 172
Score = 169 bits (428), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 77/121 (63%), Positives = 97/121 (80%)
Query: 66 LRRGAQIVCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELS 125
LR ++ C+ EV + W S+VL S +PVLVEFWAPWCGPCRMI P+IDEL+
Sbjct: 50 LRPASRFACQCSNVVDEVVVADEKNWDSMVLGSEAPVLVEFWAPWCGPCRMIAPVIDELA 109
Query: 126 KQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKF 185
K+YVGK+KC KVNTD+SP+IAT YGIRSIPTV++FKNGEKK++VIGAVPK+TL T I+K+
Sbjct: 110 KEYVGKIKCCKVNTDDSPNIATNYGIRSIPTVLMFKNGEKKESVIGAVPKTTLATIIDKY 169
Query: 186 L 186
+
Sbjct: 170 V 170
>sp|Q9ZP21|TRXM_WHEAT Thioredoxin M-type, chloroplastic OS=Triticum aestivum PE=2 SV=1
Length = 175
Score = 166 bits (421), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 73/120 (60%), Positives = 96/120 (80%)
Query: 67 RRGAQIVCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSK 126
RR ++ VC+ + EV + W ++V+ SPVLVEFWAPWCGPCRMI P+IDEL+K
Sbjct: 54 RRPSRFVCKCKNVVDEVIVADEKNWDNMVIACESPVLVEFWAPWCGPCRMIAPVIDELAK 113
Query: 127 QYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
YVGK+KC KVNTD+ P+IA+ YGIRSIPTV++FK+GEKK++VIGAVPK+TL T I+K++
Sbjct: 114 DYVGKIKCCKVNTDDCPNIASTYGIRSIPTVLMFKDGEKKESVIGAVPKTTLCTIIDKYI 173
>sp|Q41864|TRXM_MAIZE Thioredoxin M-type, chloroplastic OS=Zea mays GN=TRM1 PE=2 SV=1
Length = 167
Score = 166 bits (420), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 77/136 (56%), Positives = 100/136 (73%), Gaps = 4/136 (2%)
Query: 51 RSFGSVSQGSSSSFRLRRGAQIVCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPW 110
R+ +S G ++ R R VC+++ EV + W LV+ +PVLVEFWAPW
Sbjct: 33 RALAPLSVGRVATRRPRH----VCQSKNAVDEVVVADEKNWDGLVMACETPVLVEFWAPW 88
Query: 111 CGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVI 170
CGPCRMI P+IDEL+K Y GK+ C KVNTD+SP++A+ YGIRSIPTV+IFK GEKK++VI
Sbjct: 89 CGPCRMIAPVIDELAKDYAGKITCCKVNTDDSPNVASTYGIRSIPTVLIFKGGEKKESVI 148
Query: 171 GAVPKSTLTTSIEKFL 186
GAVPKSTLTT I+K++
Sbjct: 149 GAVPKSTLTTLIDKYI 164
>sp|P0A4L1|THIO1_NOSS1 Thioredoxin-1 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=trxA
PE=3 SV=2
Length = 107
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 65/101 (64%), Positives = 87/101 (86%)
Query: 86 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 145
VTD+T++ VLDS PVLV+FWAPWCGPCRM+ P++DE+++QY GK+K KVNTDE+P +
Sbjct: 7 VTDSTFKQEVLDSDVPVLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDENPQV 66
Query: 146 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
A++YGIRSIPT+MIFK G+K D V+GAVPK+TL+ ++EK L
Sbjct: 67 ASQYGIRSIPTLMIFKGGQKVDMVVGAVPKTTLSQTLEKHL 107
>sp|P0A4L2|THIO1_ANASO Thioredoxin-1 OS=Anabaena sp. (strain PCC 7119) GN=trxA PE=1 SV=2
Length = 107
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 65/101 (64%), Positives = 87/101 (86%)
Query: 86 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 145
VTD+T++ VLDS PVLV+FWAPWCGPCRM+ P++DE+++QY GK+K KVNTDE+P +
Sbjct: 7 VTDSTFKQEVLDSDVPVLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDENPQV 66
Query: 146 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
A++YGIRSIPT+MIFK G+K D V+GAVPK+TL+ ++EK L
Sbjct: 67 ASQYGIRSIPTLMIFKGGQKVDMVVGAVPKTTLSQTLEKHL 107
>sp|P12243|THIO1_SYNE7 Thioredoxin-1 OS=Synechococcus elongatus (strain PCC 7942) GN=trxA
PE=3 SV=2
Length = 107
Score = 153 bits (387), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 89/102 (87%)
Query: 85 AVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPS 144
AVTDAT++ VL+S PVLV+FWAPWCGPCRM+ P++DE+++QY ++K KVNTDE+PS
Sbjct: 6 AVTDATFKQEVLESSIPVLVDFWAPWCGPCRMVAPVVDEIAQQYSDQVKVVKVNTDENPS 65
Query: 145 IATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
+A++YGIRSIPT+MIFK+G++ DTV+GAVPK+TL +++K L
Sbjct: 66 VASQYGIRSIPTLMIFKDGQRVDTVVGAVPKTTLANTLDKHL 107
>sp|P52231|THIO_SYNY3 Thioredoxin OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=trxA
PE=1 SV=3
Length = 107
Score = 153 bits (386), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 64/103 (62%), Positives = 89/103 (86%)
Query: 84 PAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESP 143
P V+DA+++ VLDS PVLV+FWAPWCGPCRM+ P++DE+S+QY GK+K K+NTDE+P
Sbjct: 5 PQVSDASFKEDVLDSELPVLVDFWAPWCGPCRMVAPVVDEISQQYEGKVKVVKLNTDENP 64
Query: 144 SIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
+ A++YGIRSIPT+MIFK G++ D V+GAVPK+TL +++EK+L
Sbjct: 65 NTASQYGIRSIPTLMIFKGGQRVDMVVGAVPKTTLASTLEKYL 107
>sp|P23400|TRXM_CHLRE Thioredoxin M-type, chloroplastic OS=Chlamydomonas reinhardtii
GN=TRXM PE=1 SV=3
Length = 140
Score = 152 bits (384), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 89/105 (84%)
Query: 82 EVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDE 141
E AV D T++++VL+S PVLV+FWAPWCGPCR+I P++DE++ +Y KLKC K+NTDE
Sbjct: 35 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDE 94
Query: 142 SPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
SP++A+ YGIRSIPT+M+FK G+K +T+IGAVPK+T+ ++EK+L
Sbjct: 95 SPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYL 139
>sp|P37395|THIO_CYACA Thioredoxin OS=Cyanidium caldarium GN=trxA PE=3 SV=1
Length = 107
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 87/101 (86%)
Query: 86 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 145
VTD +++ V++S VLV+FWAPWCGPCRMI P+IDEL+++YV ++K K+NTDE+PSI
Sbjct: 7 VTDFSFEKEVVNSEKLVLVDFWAPWCGPCRMISPVIDELAQEYVEQVKIVKINTDENPSI 66
Query: 146 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
+ YGIRSIPT+M+FK+G++ DTVIGAVPKSTLT +++K+L
Sbjct: 67 SAEYGIRSIPTLMLFKDGKRVDTVIGAVPKSTLTNALKKYL 107
>sp|P50254|THIO_PORYE Thioredoxin OS=Porphyra yezoensis GN=trxA PE=3 SV=1
Length = 107
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 86/104 (82%)
Query: 83 VPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDES 142
V VTDA+++ V+++ PVLV+FWAPWCGPCRM+ P++DE++++Y +K K+NTD++
Sbjct: 3 VSQVTDASFKQEVINNNLPVLVDFWAPWCGPCRMVSPVVDEIAEEYESSIKVVKINTDDN 62
Query: 143 PSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
P+IA YGIRSIPT+MIFK GE+ DTVIGAVPKSTL +++ K++
Sbjct: 63 PTIAAEYGIRSIPTLMIFKAGERVDTVIGAVPKSTLASTLNKYI 106
>sp|P51225|THIO_PORPU Thioredoxin OS=Porphyra purpurea GN=trxA PE=3 SV=1
Length = 107
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 86/104 (82%)
Query: 83 VPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDES 142
V VTDA+++ V+++ PVLV+FWAPWCGPCRM+ P++D ++++Y +K K+NTD++
Sbjct: 3 VSQVTDASFKQEVINNDLPVLVDFWAPWCGPCRMVSPVVDAIAEEYESSIKVVKINTDDN 62
Query: 143 PSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
P+IA YGIRSIPT+MIFK+GE+ DTVIGAVPKSTL +++ K++
Sbjct: 63 PTIAAEYGIRSIPTLMIFKSGERVDTVIGAVPKSTLESTLNKYI 106
>sp|P50338|THIO_GRIPA Thioredoxin OS=Griffithsia pacifica GN=trxA PE=3 SV=2
Length = 109
Score = 139 bits (351), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 79/104 (75%)
Query: 83 VPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDES 142
+ V D ++ V++S PVLV+FWAPWCGPCRMI IDE++ Y KLK KVNTD++
Sbjct: 3 ISQVIDTSFHEEVINSRQPVLVDFWAPWCGPCRMIASTIDEIAHDYKDKLKVVKVNTDQN 62
Query: 143 PSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
P+IAT YGIRSIPTVMIF NG+K DTV+GAVPK TL +++K L
Sbjct: 63 PTIATEYGIRSIPTVMIFINGKKVDTVVGAVPKLTLLNTLQKHL 106
>sp|O22022|THIO_CYAME Thioredoxin OS=Cyanidioschyzon merolae GN=trxA PE=3 SV=1
Length = 102
Score = 131 bits (329), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 81/101 (80%), Gaps = 2/101 (1%)
Query: 86 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 145
+ + T+++ VL S VLV+FWAPWCGPCRMI PI++E++K++ LK +VNTDE+P++
Sbjct: 4 IDELTFENEVLQSEKLVLVDFWAPWCGPCRMIGPILEEIAKEF--NLKVVQVNTDENPNL 61
Query: 146 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
AT YGIRSIPT+M+FK G++ DTVIGAVPKS L +I K+L
Sbjct: 62 ATFYGIRSIPTLMLFKKGQRVDTVIGAVPKSILIHTINKYL 102
>sp|Q4UNK3|THIO_RICFE Thioredoxin OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
GN=trxA PE=3 SV=2
Length = 105
Score = 130 bits (326), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 58/99 (58%), Positives = 78/99 (78%)
Query: 86 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 145
VTD++++ VL+S PVLV+FWA WCGPC+M+ PIIDE+SK+ GK+K K+N DE+P+I
Sbjct: 5 VTDSSFKKEVLESDLPVLVDFWAEWCGPCKMLTPIIDEISKELKGKVKVLKMNIDENPNI 64
Query: 146 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 184
+ YGIRSIPT+M+FKNGE+KDT IG K++L I K
Sbjct: 65 PSEYGIRSIPTIMLFKNGEQKDTKIGLQQKNSLLDWINK 103
>sp|Q7XQQ2|TRXM3_ORYSJ Thioredoxin M3, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os04g0430800 PE=2 SV=4
Length = 175
Score = 129 bits (325), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 74/99 (74%)
Query: 86 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 145
+T +W V+ S PVL+EFWA WCGPCRM+H I+DE++++Y G++KCYK++TD+ P +
Sbjct: 70 ITACSWNEYVICSDIPVLIEFWASWCGPCRMVHRIVDEIAQEYAGRIKCYKLDTDDYPQV 129
Query: 146 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 184
AT Y I IPTV++FK+GEK ++ G +PK+ +IEK
Sbjct: 130 ATSYSIERIPTVLLFKDGEKTHSITGTLPKAVYVRAIEK 168
>sp|Q92JR5|THIO_RICCN Thioredoxin OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7)
GN=trxA PE=3 SV=1
Length = 105
Score = 126 bits (316), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 76/99 (76%)
Query: 86 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 145
V D++++ VL+S PVLV+FWA WCGPC+M+ PIIDE+SK+ GK+K K+N DE+P+
Sbjct: 5 VMDSSFKKEVLESDLPVLVDFWAEWCGPCKMLTPIIDEISKELQGKVKVLKMNIDENPNT 64
Query: 146 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 184
+ YGIRSIPT+M+FKNGE+KDT IG K++L I K
Sbjct: 65 PSEYGIRSIPTIMLFKNGEQKDTKIGLQQKNSLLDWINK 103
>sp|Q9ZEE0|THIO_RICPR Thioredoxin OS=Rickettsia prowazekii (strain Madrid E) GN=trxA PE=3
SV=2
Length = 105
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 77/102 (75%)
Query: 83 VPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDES 142
V VTD+++++ VL+S PV+V+FWA WCGPC+M+ PIIDE+SK+ K+K K+N DE+
Sbjct: 2 VNNVTDSSFKNEVLESDLPVMVDFWAEWCGPCKMLIPIIDEISKELQDKVKVLKMNIDEN 61
Query: 143 PSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 184
P + YGIRSIPT+M+FKNGE+KDT IG K++L I K
Sbjct: 62 PKTPSEYGIRSIPTIMLFKNGEQKDTKIGLQQKNSLLDWINK 103
>sp|P33791|THIO_STRAU Thioredoxin (Fragment) OS=Streptomyces aureofaciens GN=trxA PE=3
SV=1
Length = 106
Score = 123 bits (309), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 76/101 (75%)
Query: 86 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 145
VT+AT++S VL+S PVLV F PWCGPC+M+ P++DE++ +Y GK+K KVNTDE+P +
Sbjct: 6 VTNATFKSDVLESDKPVLVHFEGPWCGPCKMVAPVLDEIANEYEGKVKVAKVNTDENPQL 65
Query: 146 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
A++YG+RSIPT ++FK GE ++GA PK+ L ++ L
Sbjct: 66 ASQYGVRSIPTRLMFKGGEVAANMVGAAPKTRLAAFLDASL 106
>sp|Q68Y00|THIO_RICTY Thioredoxin OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington)
GN=trxA PE=3 SV=1
Length = 105
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 75/102 (73%)
Query: 83 VPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDES 142
V VTD ++++ VL+S PV+V+FWA WCGPC+M+ PIIDE+SK+ K+K K+N DE+
Sbjct: 2 VNNVTDISFKNEVLESDLPVIVDFWAEWCGPCKMLIPIIDEISKELQDKVKVLKMNIDEN 61
Query: 143 PSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 184
P + YG+RSIPT+M+FKNGE+KDT IG K +L I K
Sbjct: 62 PKTPSEYGVRSIPTIMLFKNGEQKDTKIGLQQKKSLLDWINK 103
>sp|Q9SEU7|TRXM3_ARATH Thioredoxin M3, chloroplastic OS=Arabidopsis thaliana GN=GAT1 PE=2
SV=2
Length = 173
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 72/101 (71%)
Query: 86 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 145
VT +W+ VL S +PVLVEF+ WCGPCRM+H IIDE++ Y GKL CY +N D +
Sbjct: 71 VTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPV 130
Query: 146 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
A Y I+++P V++FKNGEK+++++G +PK ++IE+ L
Sbjct: 131 AEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVL 171
>sp|Q1RKN1|THIO_RICBR Thioredoxin OS=Rickettsia bellii (strain RML369-C) GN=trxA PE=3
SV=2
Length = 105
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 72/97 (74%)
Query: 86 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 145
VTD +++ VL S PVLV+FWA WC PCRM+ PII+E+SK K+K K+N DE+P I
Sbjct: 5 VTDKSFEEEVLKSDLPVLVDFWAEWCSPCRMLTPIIEEISKDLESKVKVLKMNIDENPEI 64
Query: 146 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSI 182
++YGIRSIPTVM+FKNGE+KDT +G K++L I
Sbjct: 65 PSKYGIRSIPTVMLFKNGEQKDTKVGLHQKNSLIEWI 101
>sp|Q9CM49|THIO_PASMU Thioredoxin OS=Pasteurella multocida (strain Pm70) GN=trxA PE=3
SV=1
Length = 106
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 77/104 (74%)
Query: 81 VEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTD 140
+EV TDAT+ + V++S PVL++FWAPWCGPCRMI PI+DE++ ++ GK+K K+N D
Sbjct: 1 MEVLHSTDATFTADVVNSDVPVLLDFWAPWCGPCRMISPILDEIAAEFSGKVKVVKINID 60
Query: 141 ESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 184
E+ + + G+RSIPT+++FKNG+ T +GA+PK+ L I +
Sbjct: 61 ENQATPAQLGVRSIPTLVLFKNGKAVATQVGALPKNQLANFINQ 104
>sp|P43785|THIO_HAEIN Thioredoxin OS=Haemophilus influenzae (strain ATCC 51907 / DSM
11121 / KW20 / Rd) GN=trxA PE=3 SV=1
Length = 107
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 78/105 (74%)
Query: 82 EVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDE 141
EV + DA ++S+V++S P+L++FWAPWCGPC+MI P++DEL+ ++ GK+K K+N D+
Sbjct: 3 EVLHINDADFESVVVNSDIPILLDFWAPWCGPCKMIAPVLDELAPEFAGKVKIVKMNVDD 62
Query: 142 SPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
+ + ++G+RSIPT+++ KNG+ T +GA+PK+ L I + +
Sbjct: 63 NQATPAQFGVRSIPTLLLIKNGQVVATQVGALPKTQLANFINQHI 107
>sp|P00275|THIO1_CORNE Thioredoxin C-1 OS=Corynebacterium nephridii PE=1 SV=1
Length = 105
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 72/98 (73%)
Query: 86 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 145
V ++ +QS VL S PV+V+FWA WCGPC+MI P +DE++ + G++K KVN DE+P +
Sbjct: 5 VDNSNFQSDVLQSSEPVVVDFWAEWCGPCKMIAPALDEIATEMAGQVKIAKVNIDENPEL 64
Query: 146 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIE 183
A ++G+RSIPT+++FK+GE ++GA PKS L I+
Sbjct: 65 AAQFGVRSIPTLLMFKDGELAANMVGAAPKSRLADWIK 102
>sp|P10472|THIO_CHLLT Thioredoxin OS=Chlorobium limicola f.sp. thiosulfatophilum GN=trxA
PE=1 SV=5
Length = 108
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 72/100 (72%)
Query: 87 TDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIA 146
TD +Q+ +LDS VLV+FWA WCGPC M+ P+I++L+ Y GK K+N DE+P+IA
Sbjct: 8 TDKNFQTEILDSDKAVLVDFWASWCGPCMMLGPVIEQLADDYEGKAIIAKLNVDENPNIA 67
Query: 147 TRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
+YGIRSIPT++I K G+ D ++GA+PK+ + I++ +
Sbjct: 68 GQYGIRSIPTMLIIKGGKVVDQMVGALPKNMIAKKIDEHI 107
>sp|Q9X2T1|THIO_PSEAE Thioredoxin OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 /
1C / PRS 101 / LMG 12228) GN=trxA PE=3 SV=1
Length = 108
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 71/98 (72%)
Query: 86 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 145
VTDA+++ VL + PVLV++WA WCGPC+MI P++DE+++ Y GKLK K+N DE+
Sbjct: 8 VTDASFEQDVLKADGPVLVDYWAEWCGPCKMIAPVLDEVARDYQGKLKVCKLNIDENQDT 67
Query: 146 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIE 183
+YG+R IPT+M+FK+G + T +GA+ KS L ++
Sbjct: 68 PPKYGVRGIPTLMLFKDGNVEATKVGALSKSQLAAFLD 105
>sp|P0AA30|THIO_SHIFL Thioredoxin-1 OS=Shigella flexneri GN=trxA PE=3 SV=2
Length = 109
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 70/101 (69%)
Query: 86 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 145
+TD ++ + VL + +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P
Sbjct: 8 LTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 67
Query: 146 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
A +YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 68 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 108
>sp|P0AA28|THIO_SALTY Thioredoxin-1 OS=Salmonella typhimurium (strain LT2 / SGSC1412 /
ATCC 700720) GN=trxA PE=3 SV=2
Length = 109
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 70/101 (69%)
Query: 86 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 145
+TD ++ + VL + +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P
Sbjct: 8 LTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 67
Query: 146 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
A +YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 68 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 108
>sp|P0AA29|THIO_SALTI Thioredoxin-1 OS=Salmonella typhi GN=trxA PE=3 SV=2
Length = 109
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 70/101 (69%)
Query: 86 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 145
+TD ++ + VL + +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P
Sbjct: 8 LTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 67
Query: 146 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
A +YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 68 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 108
>sp|P0AA25|THIO_ECOLI Thioredoxin-1 OS=Escherichia coli (strain K12) GN=trxA PE=1 SV=2
Length = 109
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 70/101 (69%)
Query: 86 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 145
+TD ++ + VL + +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P
Sbjct: 8 LTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 67
Query: 146 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
A +YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 68 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 108
>sp|P0AA26|THIO_ECOL6 Thioredoxin-1 OS=Escherichia coli O6:H1 (strain CFT073 / ATCC
700928 / UPEC) GN=trxA PE=3 SV=2
Length = 109
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 70/101 (69%)
Query: 86 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 145
+TD ++ + VL + +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P
Sbjct: 8 LTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 67
Query: 146 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
A +YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 68 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 108
>sp|P0AA27|THIO_ECO57 Thioredoxin-1 OS=Escherichia coli O157:H7 GN=trxA PE=1 SV=2
Length = 109
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 70/101 (69%)
Query: 86 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 145
+TD ++ + VL + +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P
Sbjct: 8 LTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 67
Query: 146 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
A +YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 68 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 108
>sp|P08058|THIO_RHOSH Thioredoxin OS=Rhodobacter sphaeroides GN=trxA PE=1 SV=3
Length = 106
Score = 110 bits (275), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 66/101 (65%)
Query: 86 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 145
VTDAT+ + V S PV+V+FWA WCGPCR I P ++ELSK+Y GK+K KVN DE+P
Sbjct: 6 VTDATFDTEVRKSDVPVVVDFWAEWCGPCRQIGPALEELSKEYAGKVKIVKVNVDENPES 65
Query: 146 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
G+R IP + +FKNG+ +GA PK+ L T I L
Sbjct: 66 PAMLGVRGIPALFLFKNGQVVSNKVGAAPKAALATWIASAL 106
>sp|P09857|THIO_CHRVI Thioredoxin OS=Chromatium vinosum GN=trxA PE=1 SV=1
Length = 107
Score = 109 bits (273), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 68/98 (69%)
Query: 86 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 145
VTD +++ V S PVLV++WA WCGPC+M P+ DE++ +Y G++K K N DE+P+
Sbjct: 7 VTDDSFEEEVXKSPDPVLVDYWADWCGPCKMXAPVXDEIADEYAGRVKXAKXNXDENPNT 66
Query: 146 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIE 183
RYG R IPT+M+F+ GE + T +GAV KS LT ++
Sbjct: 67 PPRYGXRGIPTLMLFRGGEVEATKVGAVSKSQLTAFLD 104
>sp|Q8KE49|THIO2_CHLTE Thioredoxin-2 OS=Chlorobium tepidum (strain ATCC 49652 / DSM 12025
/ TLS) GN=trx2 PE=3 SV=3
Length = 109
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 70/100 (70%)
Query: 87 TDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIA 146
TD +Q+ +L+S LV+FWA WCGPC M+ P+I+EL+ Y GK K+N DE+P+ A
Sbjct: 9 TDQNFQAEILNSDKVALVDFWAAWCGPCMMLGPVIEELAGDYEGKAIIAKLNVDENPNTA 68
Query: 147 TRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
+YGIRSIPT++I K G+ D ++GA+PK+ + +++ +
Sbjct: 69 GQYGIRSIPTMLIIKGGKVVDQMVGALPKNMIAKKLDEHI 108
>sp|P52233|THIO_THIFE Thioredoxin OS=Thiobacillus ferrooxidans GN=trxA PE=3 SV=1
Length = 108
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 71/98 (72%)
Query: 86 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 145
V+D ++++ VL S PVLV+FWA WCGPC+MI PI++E++ +Y +L+ K N DE+P+
Sbjct: 8 VSDDSFETDVLKSSKPVLVDFWAEWCGPCKMIAPILEEIADEYADRLRVAKFNIDENPNT 67
Query: 146 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIE 183
+Y IR IPT+++FK G+ + T +GA+ K+ LT ++
Sbjct: 68 PPQYAIRGIPTLLLFKAGKLEATKVGALSKAQLTAFLD 105
>sp|P52230|THIO_STRCO Thioredoxin OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2)
/ M145) GN=trxA PE=1 SV=4
Length = 110
Score = 106 bits (265), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 69/101 (68%)
Query: 86 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 145
VTD +++ VL + PVLV+FWA WCGPCR I P ++ ++ +Y K++ K+N DE+P
Sbjct: 8 VTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGT 67
Query: 146 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
A +YG+ SIPT+ +++ GE T++GA PK+ + +E F+
Sbjct: 68 AAKYGVMSIPTLNVYQGGEVAKTIVGAKPKAAIVRDLEDFI 108
>sp|Q7M1B9|THIO_CHLAA Thioredoxin OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM
635 / J-10-fl) GN=trxA PE=1 SV=3
Length = 110
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 71/101 (70%)
Query: 86 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 145
V D+ + VL S +PV+V+FWAPWCGPCR+I PI+D+L+ +Y G+L KVNTD++
Sbjct: 7 VHDSDFAEKVLKSKTPVVVDFWAPWCGPCRVIAPILDKLAGEYAGRLTIAKVNTDDNVQY 66
Query: 146 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
A++ GI+ IPT++IFK+G + ++GA P++ +K L
Sbjct: 67 ASQLGIQGIPTLVIFKDGREVGRLVGARPEAMYREIFDKVL 107
>sp|P07887|THIO2_CORNE Thioredoxin C-2 OS=Corynebacterium nephridii PE=1 SV=3
Length = 108
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 66/98 (67%)
Query: 87 TDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIA 146
TD +Q+ VLD+ +PVLV+FWA WC PC+ I P+++ELS +Y GK+K KV+ A
Sbjct: 9 TDENFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEELSNEYAGKVKIVKVDVTSCEDTA 68
Query: 147 TRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 184
+Y IR+IP +++FK+GE +GA P+S L I++
Sbjct: 69 VKYNIRNIPALLMFKDGEVVAQQVGAAPRSKLAAFIDQ 106
>sp|P0A0K5|THIO_STAAW Thioredoxin OS=Staphylococcus aureus (strain MW2) GN=trxA PE=3 SV=1
Length = 104
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Query: 86 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 145
VTDA + S V +SG LV+FWA WCGPC+MI P+++EL+ Y GK K++ DE+PS
Sbjct: 6 VTDADFDSKV-ESGVQ-LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPST 63
Query: 146 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
A +Y + SIPT+++FK+G+ D V+G PK L ++K L
Sbjct: 64 AAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104
>sp|P0A0K6|THIO_STAAU Thioredoxin OS=Staphylococcus aureus GN=trxA PE=1 SV=1
Length = 104
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Query: 86 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 145
VTDA + S V +SG LV+FWA WCGPC+MI P+++EL+ Y GK K++ DE+PS
Sbjct: 6 VTDADFDSKV-ESGVQ-LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPST 63
Query: 146 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
A +Y + SIPT+++FK+G+ D V+G PK L ++K L
Sbjct: 64 AAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104
>sp|Q6GA69|THIO_STAAS Thioredoxin OS=Staphylococcus aureus (strain MSSA476) GN=trxA PE=3
SV=1
Length = 104
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Query: 86 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 145
VTDA + S V +SG LV+FWA WCGPC+MI P+++EL+ Y GK K++ DE+PS
Sbjct: 6 VTDADFDSKV-ESGVQ-LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPST 63
Query: 146 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186
A +Y + SIPT+++FK+G+ D V+G PK L ++K L
Sbjct: 64 AAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.130 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,838,550
Number of Sequences: 539616
Number of extensions: 2332244
Number of successful extensions: 7080
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 103
Number of HSP's that attempted gapping in prelim test: 6347
Number of HSP's gapped (non-prelim): 613
length of query: 186
length of database: 191,569,459
effective HSP length: 111
effective length of query: 75
effective length of database: 131,672,083
effective search space: 9875406225
effective search space used: 9875406225
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)