Query 029865
Match_columns 186
No_of_seqs 157 out of 1266
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 07:22:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029865.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029865hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hui_A Ferredoxin; cytochrome 99.9 4.3E-22 1.5E-26 154.3 8.3 106 51-172 15-125 (126)
2 3lxf_A Ferredoxin; iron, iron- 99.9 5.2E-22 1.8E-26 148.3 7.9 97 59-171 2-103 (104)
3 2bt6_A Adrenodoxin 1; rutheniu 99.9 7.5E-22 2.6E-26 147.3 8.2 98 56-169 5-108 (108)
4 2y5c_A Adrenodoxin-like protei 99.8 1.5E-21 5.2E-26 146.0 7.3 99 57-171 5-107 (109)
5 3n9z_C Adrenodoxin; cytochrome 99.8 1.8E-22 6.2E-27 155.7 -0.0 102 55-172 3-110 (123)
6 3ah7_A [2Fe-2S]ferredoxin; [2F 99.8 6.4E-21 2.2E-25 143.2 8.2 85 76-172 17-104 (113)
7 1xlq_A Putidaredoxin, PDX; [2F 99.8 1.8E-20 6.1E-25 139.2 8.2 87 76-172 13-105 (106)
8 1uwm_A Ferredoxin VI, FDVI; el 99.8 2.2E-20 7.7E-25 138.6 7.1 86 76-171 13-104 (106)
9 2wlb_A ETP1-FD, electron trans 99.8 4.8E-20 1.6E-24 136.2 8.5 98 56-169 2-103 (103)
10 1b9r_A Protein (terpredoxin); 99.8 1.3E-20 4.4E-25 139.7 2.5 85 76-170 13-103 (105)
11 1i7h_A Ferredoxin; 2Fe-2S,elec 99.8 2.6E-19 8.9E-24 134.2 7.6 84 76-171 17-103 (111)
12 1l5p_A Ferredoxin; [2Fe-2S] cl 99.8 3.4E-19 1.2E-23 129.9 7.3 78 76-163 12-90 (93)
13 1czp_A Ferredoxin I; [2Fe-2S] 99.7 6.2E-17 2.1E-21 118.6 4.9 77 76-171 16-94 (98)
14 1frd_A Heterocyst [2Fe-2S] fer 99.7 7.2E-17 2.5E-21 117.9 5.2 78 76-172 16-95 (98)
15 1iue_A Ferredoxin; electron tr 99.6 8.5E-17 2.9E-21 118.0 5.0 78 76-172 14-93 (98)
16 1awd_A Ferredoxin; electron tr 99.6 9.1E-17 3.1E-21 116.9 5.0 78 76-172 12-91 (94)
17 1a70_A Ferredoxin; iron-sulfur 99.6 8.4E-17 2.9E-21 117.9 4.7 77 76-171 14-92 (97)
18 1jq4_A Methane monooxygenase c 99.6 2.5E-17 8.5E-22 120.6 0.4 78 76-170 17-96 (98)
19 1frr_A Ferredoxin I; electron 99.6 1.6E-16 5.6E-21 115.1 4.6 76 76-170 13-90 (95)
20 1wri_A Ferredoxin II, ferredox 99.6 1.9E-16 6.6E-21 115.1 4.4 76 76-171 13-90 (93)
21 1krh_A Benzoate 1,2-dioxygenas 99.6 1.1E-15 3.7E-20 131.8 5.1 81 76-171 16-98 (338)
22 3zyy_X Iron-sulfur cluster bin 99.5 5.2E-15 1.8E-19 140.2 4.2 79 76-172 13-93 (631)
23 1doi_A 2Fe-2S ferredoxin; halo 99.5 9E-15 3.1E-19 113.1 4.5 66 77-155 39-107 (128)
24 2pia_A Phthalate dioxygenase r 99.4 2.5E-13 8.7E-18 116.8 8.6 70 77-165 248-319 (321)
25 2bs2_B Quinol-fumarate reducta 98.7 1.7E-08 5.8E-13 83.8 5.6 88 57-169 6-95 (241)
26 1kf6_B Fumarate reductase iron 98.6 4.8E-08 1.6E-12 81.1 5.0 88 57-169 7-94 (243)
27 2wdq_B Succinate dehydrogenase 98.6 6.8E-08 2.3E-12 79.9 5.5 89 57-169 4-95 (238)
28 3vr8_B Iron-sulfur subunit of 98.4 4.8E-07 1.6E-11 78.2 7.7 91 56-170 36-128 (282)
29 2h88_B Succinate dehydrogenase 98.4 2.3E-07 8E-12 77.8 5.3 89 57-170 13-104 (252)
30 1t3q_A Quinoline 2-oxidoreduct 98.0 3.7E-06 1.3E-10 67.2 4.7 56 76-162 21-78 (168)
31 3i9v_3 NADH-quinone oxidoreduc 98.0 8.2E-06 2.8E-10 78.4 7.2 75 76-168 9-96 (783)
32 3c8y_A Iron hydrogenase 1; dit 97.7 4.9E-05 1.7E-09 70.8 6.8 67 76-169 9-76 (574)
33 1rm6_C 4-hydroxybenzoyl-COA re 97.6 8E-05 2.7E-09 59.3 5.0 57 76-162 14-71 (161)
34 3hrd_D Nicotinate dehydrogenas 96.8 0.0022 7.4E-08 51.2 6.4 52 76-155 15-67 (160)
35 1n62_A Carbon monoxide dehydro 96.8 0.0025 8.7E-08 50.9 6.4 57 76-162 15-72 (166)
36 1ffv_A CUTS, iron-sulfur prote 96.7 0.003 1E-07 50.4 6.3 57 76-162 15-72 (163)
37 1dgj_A Aldehyde oxidoreductase 95.8 0.0098 3.4E-07 58.3 5.9 52 77-155 14-65 (907)
38 1vlb_A Aldehyde oxidoreductase 95.1 0.015 5E-07 57.1 4.3 53 76-155 13-65 (907)
39 2w3s_A Xanthine dehydrogenase; 93.9 0.041 1.4E-06 50.1 4.0 61 76-162 12-73 (462)
40 3nvw_A Xanthine dehydrogenase/ 93.7 0.042 1.4E-06 43.9 3.2 39 77-122 16-55 (164)
41 1y56_A Hypothetical protein PH 90.6 0.21 7.3E-06 44.6 4.3 55 55-122 13-67 (493)
42 2gag_A Heterotetrameric sarcos 86.2 0.65 2.2E-05 45.4 4.7 56 54-122 19-79 (965)
43 1ep3_B Dihydroorotate dehydrog 83.2 0.62 2.1E-05 37.9 2.6 31 91-122 209-239 (262)
44 3unc_A Xanthine dehydrogenase/ 74.4 2 6.8E-05 43.9 3.6 38 79-122 19-56 (1332)
45 3kwl_A Uncharacterized protein 65.8 7.3 0.00025 35.6 5.1 56 58-129 27-82 (514)
46 3zyv_A AOH1; oxidoreductase, m 56.3 7.3 0.00025 39.7 3.6 38 79-122 23-60 (1335)
47 3u7z_A Putative metal binding 54.4 19 0.00065 26.2 4.7 40 54-100 5-44 (101)
48 2l32_A Small archaeal modifier 29.3 50 0.0017 22.2 3.3 23 76-99 13-35 (74)
49 3kdv_A DDRB, DNA damage respon 21.0 1E+02 0.0035 24.5 4.0 37 53-96 3-39 (184)
No 1
>3hui_A Ferredoxin; cytochrome P450, electron transfer, iron, iron-sulfur, metal-binding, electron transport; 2.01A {Rhodopseudomonas palustris}
Probab=99.86 E-value=4.3e-22 Score=154.29 Aligned_cols=106 Identities=20% Similarity=0.299 Sum_probs=85.8
Q ss_pred CCCCCCcEEEEEecCCCCCCCCcceEEEEecCCchHHHHHHHHCCCC-ccccCCcccCCCCceeecCCEEEEecCc-ccC
Q 029865 51 PEPEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIE-LYATYGKVMNCGGGGSCGTCIVEIIDGK-DLL 128 (186)
Q Consensus 51 ~~~~~~~V~v~f~~~~~~~d~~~~v~~v~v~~G~tLLr~al~~~GI~-l~~~~~~~~~CgG~G~CGTC~V~V~~G~-~~l 128 (186)
.+.++..++|+|.++++ ..+++++.+|+||| ++++++||+ +++ .|+|.|.||||+|+|.+|+ ..+
T Consensus 15 ~~~~~~M~~Vt~~~~~G------~~~~v~~~~G~tLL-~aa~~~gi~gi~~------~C~G~G~CgtC~v~v~~G~~~~l 81 (126)
T 3hui_A 15 VPRGSHMAKINFVDHTG------ETRTVEVEEGATVM-EAAIRNAIPGVEA------ECGGACACATCHVYVDEAWREKV 81 (126)
T ss_dssp CCTTCSEEEEEEECTTS------CEEEEEEETTSBHH-HHHHTTTCTTCCC------TTSSSSCCSTTEEEECGGGHHHH
T ss_pred cCCCCCceEEEEEeCCC------CEEEEEECCCCcHH-HHHHHcCCCCCcc------CCCCCCCCCCCEEEECCCccccc
Confidence 44455566677876543 13688999999999 999999999 998 6999999999999999997 567
Q ss_pred CCCChHHHhccCC---CCCCeEEeeEeEeeeccCCCceEEEEcchHh
Q 029865 129 NERTNTELRYLKK---KPESWRLACQTIVGNKENSGKCRIKYLKVEA 172 (186)
Q Consensus 129 ~~~t~~E~~~L~~---~~~g~RLACQ~~v~~~~~~gdv~V~~lP~~~ 172 (186)
+++++.|+++|+. ..++|||+||+++. .|++| ++ +.+|+.+
T Consensus 82 ~~~~~~E~~~L~~~~e~~~g~RLaCQ~~~~-~dldg-l~-V~lp~~~ 125 (126)
T 3hui_A 82 GGPSPMEEDMLDFGYDVRPNSRLSCQIKVS-NELDG-LI-VTTPERQ 125 (126)
T ss_dssp CCCCHHHHHHHTTSSSCCTTEEEGGGCBCC-GGGTT-EE-EECCSCC
T ss_pred CCCCHHHhhhcCchhhccCCeEEeeeCEEC-cCCCc-EE-EEecCcC
Confidence 8899999999984 37899999999998 55555 45 5888653
No 2
>3lxf_A Ferredoxin; iron, iron-sulfur, metal-binding, metal protein; 2.30A {Novosphingobium aromaticivorans} SCOP: d.15.4.0
Probab=99.86 E-value=5.2e-22 Score=148.26 Aligned_cols=97 Identities=26% Similarity=0.374 Sum_probs=81.3
Q ss_pred EEEEecCCCCCCCCcceEEEEecCCchHHHHHHHHCCCC-ccccCCcccCCCCceeecCCEEEEecCc-ccCCCCChHHH
Q 029865 59 ELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIE-LYATYGKVMNCGGGGSCGTCIVEIIDGK-DLLNERTNTEL 136 (186)
Q Consensus 59 ~v~f~~~~~~~d~~~~v~~v~v~~G~tLLr~al~~~GI~-l~~~~~~~~~CgG~G~CGTC~V~V~~G~-~~l~~~t~~E~ 136 (186)
+|+|+++++ ..+++++.+|+||| ++++++||+ +++ .|+|.|.||||+|+|.+|+ ..++++++.|.
T Consensus 2 ~vt~~~~~G------~~~~~~~~~g~tll-~a~~~~gi~~i~~------~C~G~G~CgtC~v~v~~g~~~~l~~~~~~e~ 68 (104)
T 3lxf_A 2 AILVTTRDG------TRTEIQAEPGLSLM-EALRDAGIDELLA------LCGGCCSCATCHVLVAPAFADRLPALSGDEN 68 (104)
T ss_dssp EEEEECTTS------CEEEEECCTTSBHH-HHHHHTTCTTCCC------TTCSSSSCSTTEEEECGGGGGGSCCCCHHHH
T ss_pred EEEEEeCCC------CEEEEEECCCChHH-HHHHHcCCCCCCc------CCCCCCCCCCCEEEECCcccccCCCCCHHHH
Confidence 466877654 13689999999999 999999999 998 6999999999999999997 56788999999
Q ss_pred hccCC---CCCCeEEeeEeEeeeccCCCceEEEEcchH
Q 029865 137 RYLKK---KPESWRLACQTIVGNKENSGKCRIKYLKVE 171 (186)
Q Consensus 137 ~~L~~---~~~g~RLACQ~~v~~~~~~gdv~V~~lP~~ 171 (186)
++|+. ..++|||+||+++. .|++|. + +.+|+.
T Consensus 69 ~~L~~~~~~~~g~rLaCq~~~~-~dl~gl-~-v~ip~~ 103 (104)
T 3lxf_A 69 DLLDSSDHRTPHSRLSCQITIN-DKLEGL-E-VEIAPE 103 (104)
T ss_dssp HHHHTSTTCCTTEEEGGGCBCC-GGGTTC-E-EEECCC
T ss_pred HHhccccccCCCcEEEeeCEEc-cCCCCE-E-EEecCC
Confidence 99976 37899999999998 555554 4 477754
No 3
>2bt6_A Adrenodoxin 1; ruthenium(II) bipyridyl complex, intramolecular electron TRA electron transport, metal-binding; HET: RUA; 1.50A {Bos taurus} SCOP: d.15.4.1 PDB: 1ayf_A 3n9y_C* 2jqr_B* 3na0_C*
Probab=99.86 E-value=7.5e-22 Score=147.26 Aligned_cols=98 Identities=22% Similarity=0.377 Sum_probs=79.6
Q ss_pred CcEEEEEecCCCCCCCCcceEEEEecCCchHHHHHHHHCCCCcc--ccCCcccCCCCceeecCCEEEEecCc-ccCCCCC
Q 029865 56 PEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELY--ATYGKVMNCGGGGSCGTCIVEIIDGK-DLLNERT 132 (186)
Q Consensus 56 ~~V~v~f~~~~~~~d~~~~v~~v~v~~G~tLLr~al~~~GI~l~--~~~~~~~~CgG~G~CGTC~V~V~~G~-~~l~~~t 132 (186)
..++|+|..+++ ..+++++.+|+||| ++++++||+++ + .|+|.|.||||+|+|.+|+ ..+++++
T Consensus 5 ~m~~V~~~~~~g------~~~~v~~~~g~tLL-~aa~~~gi~i~~~~------~Cgg~G~CgtC~v~v~~g~~~~l~~~~ 71 (108)
T 2bt6_A 5 DKITVHFINRDG------ETLTTKGKIGDSLL-DVVVQNNLDIDGFG------ACEGTLACSTCHLIFEQHIFEKLEAIT 71 (108)
T ss_dssp CEEEEEEECTTS------CEEEEEEETTCBHH-HHHHHTTCCCTTTT------TTSSSSSBSTTEEECCHHHHTTSCCCC
T ss_pred ceEEEEEECCCC------CEEEEEECCCChHH-HHHHHcCCCCCccc------CCCCCcCcCCCEEEECccccccCCCCC
Confidence 346667775533 13588999999999 99999999999 8 6999999999999999996 5778899
Q ss_pred hHHHhccCC---CCCCeEEeeEeEeeeccCCCceEEEEcc
Q 029865 133 NTELRYLKK---KPESWRLACQTIVGNKENSGKCRIKYLK 169 (186)
Q Consensus 133 ~~E~~~L~~---~~~g~RLACQ~~v~~~~~~gdv~V~~lP 169 (186)
+.|.++|+. ..++|||+||+++. +++++ ++ +.+|
T Consensus 72 ~~E~~~L~~~~~~~~g~rLaCq~~~~-~d~d~-~~-V~~p 108 (108)
T 2bt6_A 72 DEENDMLDLAYGLTDRSRLGCQICLT-KAMDN-MT-VRVP 108 (108)
T ss_dssp HHHHHHHTTCTTCCTTEEEGGGCBCC-GGGTT-EE-EECC
T ss_pred HHHHHHHhCcccCCCCcEeeEEEEec-CCCCC-EE-EEcC
Confidence 999999985 37899999999998 44333 55 4565
No 4
>2y5c_A Adrenodoxin-like protein, mitochondrial; electron transport, iron-sulfur cluster biogenesis; 1.70A {Homo sapiens}
Probab=99.85 E-value=1.5e-21 Score=145.98 Aligned_cols=99 Identities=22% Similarity=0.355 Sum_probs=80.5
Q ss_pred cEEEEEecCCCCCCCCcceEEEEecCCchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEecCc-ccCCCCChHH
Q 029865 57 EIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGK-DLLNERTNTE 135 (186)
Q Consensus 57 ~V~v~f~~~~~~~d~~~~v~~v~v~~G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~-~~l~~~t~~E 135 (186)
.++|+|+.+++ ..+++++.+|+||| ++++++||++++ .|+|.|.||||+|+|.+|+ ..++++++.|
T Consensus 5 m~~v~~~~~~g------~~~~~~~~~g~tlL-~aa~~~gi~i~~------~C~g~G~CgtC~v~v~~g~~~~l~~~~~~E 71 (109)
T 2y5c_A 5 VVNVVFVDRSG------QRIPVSGRVGDNVL-HLAQRHGVDLEG------ACEASLACSTCHVYVSEDHLDLLPPPEERE 71 (109)
T ss_dssp EEEEEEECTTS------CEEEEEEETTCBHH-HHHHHTTCCCCC------TTSSSSSCCTTEEEECHHHHTTSCCCCHHH
T ss_pred cEEEEEEcCCC------CEEEEEECCCCcHH-HHHHHcCCCCCc------CCCCCcCcCccEEEECCcchhhcCCCCHHH
Confidence 45677876543 13578999999999 999999999998 6998899999999999996 5678899999
Q ss_pred HhccCC---CCCCeEEeeEeEeeeccCCCceEEEEcchH
Q 029865 136 LRYLKK---KPESWRLACQTIVGNKENSGKCRIKYLKVE 171 (186)
Q Consensus 136 ~~~L~~---~~~g~RLACQ~~v~~~~~~gdv~V~~lP~~ 171 (186)
.++|+. ..+||||+||+++. .|+++ ++ +.+|++
T Consensus 72 ~~~L~~~~~~~~g~rLaCq~~~~-~d~~~-~~-v~ip~~ 107 (109)
T 2y5c_A 72 DDMLDMAPLLQENSRLGCQIVLT-PELEG-AE-FTLPKI 107 (109)
T ss_dssp HHHHHTSTTCCTTEEEGGGCBCC-GGGTT-CE-EECCSC
T ss_pred HHHHhccccCCCCcEeeEEeEEe-cCCCe-EE-EEecCC
Confidence 999973 38899999999998 44333 45 478864
No 5
>3n9z_C Adrenodoxin; cytochrome P450, 22-hydroxycholesterol, cholesterol SIDE CHA cleavage, structural genomics; HET: HEM HC9; 2.17A {Homo sapiens} SCOP: d.15.4.1 PDB: 3na1_C* 3p1m_A* 1l6u_A 1l6v_A 1e6e_B* 1cje_A
Probab=99.83 E-value=1.8e-22 Score=155.71 Aligned_cols=102 Identities=23% Similarity=0.385 Sum_probs=25.2
Q ss_pred CCcEEEEEecCCCCCCCCcceEEEEecCCchHHHHHHHHCCCCcc--ccCCcccCCCCceeecCCEEEEecCc-ccCCCC
Q 029865 55 KPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELY--ATYGKVMNCGGGGSCGTCIVEIIDGK-DLLNER 131 (186)
Q Consensus 55 ~~~V~v~f~~~~~~~d~~~~v~~v~v~~G~tLLr~al~~~GI~l~--~~~~~~~~CgG~G~CGTC~V~V~~G~-~~l~~~ 131 (186)
+..++|+|+++++. .+++++..|+||| ++++++||+++ + .|+|.|.||||+|+|.+|+ ..++++
T Consensus 3 ~~~v~Vtf~~~~G~------~~~v~~~~G~tLl-~aa~~~gi~i~g~~------~CgG~g~CgtC~v~v~~~~~~~l~~~ 69 (123)
T 3n9z_C 3 EDKITVHFINRDGE------TLTTKGKVGDSLL-DVVVENNLDIDGFG------ACEGTLACSTCHLIFEDHIYEKLDAI 69 (123)
T ss_dssp -----------------------------------------------C------TTCSSSSCSTTBC-------------
T ss_pred CCcEEEEEEeCCCC------EEEEEECCCCcHH-HHHHHcCCCCCcCC------CCCCCCEeCCCeeEEeccccccCCCC
Confidence 34566778776541 2578899999999 99999999998 6 6999999999999999754 678899
Q ss_pred ChHHHhccCC---CCCCeEEeeEeEeeeccCCCceEEEEcchHh
Q 029865 132 TNTELRYLKK---KPESWRLACQTIVGNKENSGKCRIKYLKVEA 172 (186)
Q Consensus 132 t~~E~~~L~~---~~~g~RLACQ~~v~~~~~~gdv~V~~lP~~~ 172 (186)
++.|.++|+. ..++||||||+++. +++++ ++ +.+|+..
T Consensus 70 ~~~E~~~L~~~~~~~~~~RLaCQ~~v~-~~ld~-l~-V~ip~~~ 110 (123)
T 3n9z_C 70 TDEENDMLDLAYGLTDRSRLGCQICLT-KSMDN-MT-VRVPETV 110 (123)
T ss_dssp -CHHHHHHCC--------CBCC----------------------
T ss_pred ChHHHhhhcccccccCCeEEeeEeEEc-cCCCC-EE-EEECccc
Confidence 9999999985 26899999999998 44444 44 5788776
No 6
>3ah7_A [2Fe-2S]ferredoxin; [2Fe-2S] cluster, iron-sulfur cluster biosynthes pseudomonas, metal binding protein; 1.90A {Pseudomonas putida}
Probab=99.83 E-value=6.4e-21 Score=143.23 Aligned_cols=85 Identities=27% Similarity=0.415 Sum_probs=74.5
Q ss_pred EEEEecCCchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEecCcccCCCCChHHHhccCC---CCCCeEEeeEe
Q 029865 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK---KPESWRLACQT 152 (186)
Q Consensus 76 ~~v~v~~G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~---~~~g~RLACQ~ 152 (186)
+++++.+|+||| ++|+++||++++ .|+|.|.||+|+|+|.+|...++++++.|..+|+. ..++|||+||+
T Consensus 17 ~~v~~~~g~tlL-~aa~~~Gi~i~~------~C~g~G~CgtC~v~v~~G~~~~~~~~~~e~~~L~~~~~~~~g~rLaCq~ 89 (113)
T 3ah7_A 17 LTVEVKPGTNIL-ELAHDHHIEMES------ACGGVKACTTCHCIVRKGFDSLEEADELEEDMLDKAWGLEAQSRLGCQV 89 (113)
T ss_dssp EEEECCTTCBHH-HHHHHTTCCCCC------TTCSSSSCSTTEEEEEESGGGSCCCCHHHHHHHTTSTTCCTTEEEGGGC
T ss_pred eEEEECCCCcHH-HHHHHcCCCCCc------CCCCCCCcCCCEEEEcCCcccCCCCCHHHHHhhhcccccCCCcEEeeeC
Confidence 588999999999 999999999998 69989999999999999988888899999999974 47899999999
Q ss_pred EeeeccCCCceEEEEcchHh
Q 029865 153 IVGNKENSGKCRIKYLKVEA 172 (186)
Q Consensus 153 ~v~~~~~~gdv~V~~lP~~~ 172 (186)
++. +++++ +.+|+++
T Consensus 90 ~~~----~~dl~-v~~~~~~ 104 (113)
T 3ah7_A 90 FVA----DEDLT-IEIPKYS 104 (113)
T ss_dssp BCC----SSCEE-EECCSCC
T ss_pred EEe----CCCEE-EEECchh
Confidence 996 25777 4777644
No 7
>1xlq_A Putidaredoxin, PDX; [2Fe-2S], ferredoxin, oxidoreductase; 1.45A {Pseudomonas putida} SCOP: d.15.4.1 PDB: 1xlp_A 1oqr_A 1r7s_A 1pdx_A 1yji_A 1yjj_A 1oqq_A 1xln_A 1xlo_A 3lb8_C* 1put_A 1gpx_A
Probab=99.82 E-value=1.8e-20 Score=139.20 Aligned_cols=87 Identities=24% Similarity=0.399 Sum_probs=74.1
Q ss_pred EEEEecCCchHHHHHHHHCCCC-ccccCCcccCCCCceeecCCEEEEecCc-ccCCCCChHHHhccCC---C-CCCeEEe
Q 029865 76 ERAKAISGEKLLRNIMLDNKIE-LYATYGKVMNCGGGGSCGTCIVEIIDGK-DLLNERTNTELRYLKK---K-PESWRLA 149 (186)
Q Consensus 76 ~~v~v~~G~tLLr~al~~~GI~-l~~~~~~~~~CgG~G~CGTC~V~V~~G~-~~l~~~t~~E~~~L~~---~-~~g~RLA 149 (186)
+++++.+|+||| ++++++||+ +++ .|+|.|.||||+|+|.+|+ ..++++++.|.++|+. . .+++||+
T Consensus 13 ~~~~~~~g~tlL-eaa~~~gi~~i~~------~C~g~G~CgtC~v~v~~g~~~~l~~~~~~e~~~L~~~~~~~~~g~rLa 85 (106)
T 1xlq_A 13 RELDVADGVSLM-QAAVSNGIYDIVG------DCGGSASCATCHVYVNEAFTDKVPAANEREIGMLESVTAELKPNSRLC 85 (106)
T ss_dssp EEEECCTTCBHH-HHHHHTTCTTSCC------TTCSSSSSCTTEEEECTTTGGGSCCCCHHHHHHHTTCSSCCCTTEEEG
T ss_pred EEEEECCCCcHH-HHHHHcCCCCCCc------CCCCCcccCcCEEEECCcccccCCCCCHHHHHHhhcccccCCCCcEee
Confidence 588999999999 999999999 998 6998999999999999996 5678889999999985 3 6899999
Q ss_pred eEeEeeeccCCCceEEEEcchHh
Q 029865 150 CQTIVGNKENSGKCRIKYLKVEA 172 (186)
Q Consensus 150 CQ~~v~~~~~~gdv~V~~lP~~~ 172 (186)
||+++. .+++ +++ +.+|+..
T Consensus 86 Cq~~~~-~d~~-~l~-v~~p~~~ 105 (106)
T 1xlq_A 86 CQIIMT-PELD-GIV-VDVPDRQ 105 (106)
T ss_dssp GGCBCC-GGGT-TEE-EECCSCC
T ss_pred eeeEee-cCCC-CEE-EEecCcc
Confidence 999998 3333 355 5788654
No 8
>1uwm_A Ferredoxin VI, FDVI; electron transport, metal-binding, iron-sulfur, iron, 2Fe-2S; 2.0A {Rhodobacter capsulatus} SCOP: d.15.4.1 PDB: 1e9m_A
Probab=99.81 E-value=2.2e-20 Score=138.64 Aligned_cols=86 Identities=24% Similarity=0.317 Sum_probs=73.5
Q ss_pred EEEEecCCchHHHHHHHHCCCC-ccccCCcccCCCCceeecCCEEEEecCc-ccCCCCChHHHhccCCC---C-CCeEEe
Q 029865 76 ERAKAISGEKLLRNIMLDNKIE-LYATYGKVMNCGGGGSCGTCIVEIIDGK-DLLNERTNTELRYLKKK---P-ESWRLA 149 (186)
Q Consensus 76 ~~v~v~~G~tLLr~al~~~GI~-l~~~~~~~~~CgG~G~CGTC~V~V~~G~-~~l~~~t~~E~~~L~~~---~-~g~RLA 149 (186)
+++++.+|+||| ++|+++||+ +++ .|+|.|.||||+|+|.+|+ ..++++++.|.++|+.. . ++|||+
T Consensus 13 ~~~~~~~g~tlL-~aa~~~gi~~i~~------~C~g~G~CgtC~v~v~~g~~~~l~~~~~~e~~~L~~~~~~~~~g~rLa 85 (106)
T 1uwm_A 13 HEVEAKPGLTVM-EAARDNGVPGIDA------DCGGACACSTCHAYVDPAWVDKLPKALPTETDMIDFAYEPNPATSRLT 85 (106)
T ss_dssp EEEECCTTSBHH-HHHHTTTCTTCCC------TTSSSSSSCTTEEEECHHHHTTSCCCCHHHHHHHTTSSSCCTTTEEEG
T ss_pred EEEEECCCCcHH-HHHHHcCCCCccc------CCCCCCCcCcCEEEECCcccccCCCCCHHHHHHhcCccccCCCCcEec
Confidence 588999999999 999999999 998 6998999999999999996 66788999999999863 5 899999
Q ss_pred eEeEeeeccCCCceEEEEcchH
Q 029865 150 CQTIVGNKENSGKCRIKYLKVE 171 (186)
Q Consensus 150 CQ~~v~~~~~~gdv~V~~lP~~ 171 (186)
||+++. .+++ +++ +.+|+.
T Consensus 86 Cq~~~~-~d~~-~l~-v~~p~~ 104 (106)
T 1uwm_A 86 CQIKVT-SLLD-GLV-VHLPEK 104 (106)
T ss_dssp GGCBCC-GGGT-TEE-EECCSC
T ss_pred ccCEEc-cCCC-CEE-EEecCC
Confidence 999998 3333 355 478764
No 9
>2wlb_A ETP1-FD, electron transfer protein 1, mitochondrial; iron-sulfur, iron, transport, ferredoxin, adrenodoxin-like, electron transport; 2.60A {Schizosaccharomyces pombe}
Probab=99.81 E-value=4.8e-20 Score=136.21 Aligned_cols=98 Identities=27% Similarity=0.462 Sum_probs=78.9
Q ss_pred CcEEEEEecCCCCCCCCcceEEEEecCCchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEecCc-ccCCCCChH
Q 029865 56 PEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGK-DLLNERTNT 134 (186)
Q Consensus 56 ~~V~v~f~~~~~~~d~~~~v~~v~v~~G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~-~~l~~~t~~ 134 (186)
+.++|+|..+++ ..+++++.+|+||| ++|+++|+++++ .|+|.|.||+|+|+|.+|+ ..++++++.
T Consensus 2 ~~~~v~~~~~~g------~~~~~~~~~g~tlL-~a~~~~gi~i~~------~C~g~G~Cg~C~v~v~~g~~~~~~~~~~~ 68 (103)
T 2wlb_A 2 TGIKVFFVTPEG------REIMIEGNEGDSIL-DLAHANNIDLEG------ACEGSVACSTCHVIVDPEHYELLDPPEED 68 (103)
T ss_dssp CCEEEEEECTTC------CEEEEEECTTCBHH-HHHHHTTCCCCC------TTTTSSCCSTTEEEECHHHHHHSCCCCHH
T ss_pred CceEEEEEeCCC------CEEEEEECCCCHHH-HHHHHcCCCcCc------CCCCCCCcCCCEEEECCCchhccCCCCHH
Confidence 346677774332 12588999999999 999999999998 6999999999999999997 457888999
Q ss_pred HHhccCC---CCCCeEEeeEeEeeeccCCCceEEEEcc
Q 029865 135 ELRYLKK---KPESWRLACQTIVGNKENSGKCRIKYLK 169 (186)
Q Consensus 135 E~~~L~~---~~~g~RLACQ~~v~~~~~~gdv~V~~lP 169 (186)
|.++|+. ..++|||+||+++. .++++ ++ +.+|
T Consensus 69 E~~~L~~~~~~~~g~rLaCq~~~~-~d~~~-l~-v~lp 103 (103)
T 2wlb_A 69 EEDMLDLAFGLEETSRLGCQVLLR-KDLDG-IR-VRIP 103 (103)
T ss_dssp HHHHHTTBTTCCTTEEEGGGCBCC-GGGTT-EE-EECC
T ss_pred HHHHHhcccCCCCCcEeeEeeEeC-CCCCc-EE-EEcC
Confidence 9999986 37899999999998 33333 55 4665
No 10
>1b9r_A Protein (terpredoxin); structure from molmol, ferredoxin; NMR {Pseudomonas SP} SCOP: d.15.4.1
Probab=99.79 E-value=1.3e-20 Score=139.74 Aligned_cols=85 Identities=25% Similarity=0.445 Sum_probs=72.1
Q ss_pred EEEEecCCchHHHHHHHHCCCC-ccccCCcccCCCCceeecCCEEEEecCc-ccCCCCChHHHhccC--C--CCCCeEEe
Q 029865 76 ERAKAISGEKLLRNIMLDNKIE-LYATYGKVMNCGGGGSCGTCIVEIIDGK-DLLNERTNTELRYLK--K--KPESWRLA 149 (186)
Q Consensus 76 ~~v~v~~G~tLLr~al~~~GI~-l~~~~~~~~~CgG~G~CGTC~V~V~~G~-~~l~~~t~~E~~~L~--~--~~~g~RLA 149 (186)
+++++.+|+||| ++++++||+ +++ .|+|.|.||||+|+|.+|+ ..++++++.|.++|+ . ..++|||+
T Consensus 13 ~~~~~~~g~tlL-~aa~~~gi~~i~~------~C~g~G~CgtC~v~v~~G~~~~l~~~~~~e~~~L~~~~~~~~~g~rLa 85 (105)
T 1b9r_A 13 YAVDAQDGQSLM-EVATQNGVPGIVA------ECGGSCVCATCRIEIEDAWVEIVGEANPDENDLLQSTGEPMTAGTRLS 85 (105)
T ss_dssp EEEECCTTCCTT-HHHHHHTCCCCCC------SSTTSSCCCCCCCEECTTTHHHHTCCCTTHHHHHHTSCCCCCTTBSCG
T ss_pred EEEEECCCChHH-HHHHHcCCCCcCc------CCCCCCCcCcCEEEECCcccccCCCCCHHHHHHhhcccccCCCCcEee
Confidence 588999999999 999999999 998 6999999999999999996 566788888999998 3 37899999
Q ss_pred eEeEeeeccCCCceEEEEcch
Q 029865 150 CQTIVGNKENSGKCRIKYLKV 170 (186)
Q Consensus 150 CQ~~v~~~~~~gdv~V~~lP~ 170 (186)
||+++. .+++ +++ +.+|+
T Consensus 86 Cq~~~~-~~~~-~l~-v~~p~ 103 (105)
T 1b9r_A 86 CQVFID-PSMD-GLI-VRVPL 103 (105)
T ss_dssp GGCCCC-TTST-TEE-EECCS
T ss_pred eeCEec-CCCC-cEE-EEecC
Confidence 999998 3332 466 47775
No 11
>1i7h_A Ferredoxin; 2Fe-2S,electron transport; 1.70A {Escherichia coli} SCOP: d.15.4.1
Probab=99.78 E-value=2.6e-19 Score=134.21 Aligned_cols=84 Identities=30% Similarity=0.368 Sum_probs=73.5
Q ss_pred EEEEecCCchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEecCcccCCCCChHHHhccCC---CCCCeEEeeEe
Q 029865 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK---KPESWRLACQT 152 (186)
Q Consensus 76 ~~v~v~~G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~---~~~g~RLACQ~ 152 (186)
+++++.+|+||| ++|+++|+.+++ .|+|.|.||+|+|+|.+|.+.+.++++.|.++|+. ..+++||+||+
T Consensus 17 ~~~~~~~g~tlL-~a~~~~gi~i~~------~C~~~G~Cg~C~v~v~~G~~~~~~~~~~e~~~L~~~~~~~~g~rLaCq~ 89 (111)
T 1i7h_A 17 AVLEANSGETIL-DAALRNGIEIEH------ACEKSCACTTCHCIVREGFDSLPESSEQEDDMLDKAWGLEPESRLSCQA 89 (111)
T ss_dssp EEEECCTTCBHH-HHHHHTTCCCCC------TTSSSSCCSTTEEEEEECGGGSCCCCHHHHHHHTTCTTCCTTEEETTTC
T ss_pred eEEEeCCCCcHH-HHHHHcCCCCcc------cCCCCCcCCCCEEEEccCcccCCCCCHHHHHHhhhccccCCCcEEEEEE
Confidence 588999999999 999999999998 69889999999999999998888889999999885 36899999999
Q ss_pred EeeeccCCCceEEEEcchH
Q 029865 153 IVGNKENSGKCRIKYLKVE 171 (186)
Q Consensus 153 ~v~~~~~~gdv~V~~lP~~ 171 (186)
++. +++++ +.+|++
T Consensus 90 ~~~----~~dl~-v~~~~~ 103 (111)
T 1i7h_A 90 RVT----DEDLV-VEIPRY 103 (111)
T ss_dssp BCC----SSCEE-EECCSC
T ss_pred EEe----CCCEE-EEEChH
Confidence 995 25777 477764
No 12
>1l5p_A Ferredoxin; [2Fe-2S] cluster, electron transfer, iron-sulfur protein, metalloprotein, oxidoreductase; 2.20A {Trichomonas vaginalis} SCOP: d.15.4.1
Probab=99.78 E-value=3.4e-19 Score=129.87 Aligned_cols=78 Identities=26% Similarity=0.572 Sum_probs=70.2
Q ss_pred EEEEecCCchHHHHHHHHCCCC-ccccCCcccCCCCceeecCCEEEEecCcccCCCCChHHHhccCCCCCCeEEeeEeEe
Q 029865 76 ERAKAISGEKLLRNIMLDNKIE-LYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154 (186)
Q Consensus 76 ~~v~v~~G~tLLr~al~~~GI~-l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLACQ~~v 154 (186)
+++++.+|+||| ++++++|++ +++ .|+|.|.||+|+|+|.+|. ++++++.|.++|++..++|||+||+++
T Consensus 12 ~~~~~~~g~tll-~a~~~~gi~gi~~------~C~G~G~Cg~C~v~v~~g~--~~~~~~~e~~~L~~~~~g~rLaCq~~~ 82 (93)
T 1l5p_A 12 KQLKFEDDQTLF-TVLTEAGLMSADD------TCQGNKACGKCICKHVSGK--VAAAEDDEKEFLEDQPANARLACAITL 82 (93)
T ss_dssp EEEECCTTEEHH-HHHHTTTSSCCTT------SCSSSSSSCCCEEEEEESC--CCCCCHHHHHHHTTSCTTEEEGGGCEE
T ss_pred EEEEECCCChHH-HHHHHcCCCcCCc------CCCCcCCcCCCEEEECCCc--CCCCCHHHHHHhcCCCCCcEEeeECEE
Confidence 588999999999 999999999 998 6999999999999999976 467788899999966899999999999
Q ss_pred eeccCCCce
Q 029865 155 GNKENSGKC 163 (186)
Q Consensus 155 ~~~~~~gdv 163 (186)
. .+++|.+
T Consensus 83 ~-~d~~g~~ 90 (93)
T 1l5p_A 83 S-GENDGAV 90 (93)
T ss_dssp C-GGGTTCE
T ss_pred C-CCCCceE
Confidence 8 7888864
No 13
>1czp_A Ferredoxin I; [2Fe-2S] protein, crystal reduced with dithionite, electron; 1.17A {Nostoc SP} SCOP: d.15.4.1 PDB: 1ewy_C* 1fxa_A 1qt9_A 1qog_A 1j7c_A 1j7b_A 1qof_A 1qob_A 1j7a_A 1qoa_A 1rfk_A 3p63_A 4fxc_A 3ab5_A 1roe_A 2cjn_A 2cjo_A 1off_A 1dox_A 1doy_A ...
Probab=99.65 E-value=6.2e-17 Score=118.59 Aligned_cols=77 Identities=18% Similarity=0.368 Sum_probs=63.4
Q ss_pred EEEEecCCchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEecCcccCCCCChHHHhccCCC--CCCeEEeeEeE
Q 029865 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTI 153 (186)
Q Consensus 76 ~~v~v~~G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~--~~g~RLACQ~~ 153 (186)
+++++.+|+||| ++++++|+.+++ .|+ .|.||+|+|+|.+|+... .|...|++. .+++||+||++
T Consensus 16 ~~~~~~~g~tlL-~a~~~~gi~i~~------~C~-~G~Cg~C~v~v~~G~~~~-----~e~~~L~~~e~~~g~~LaCq~~ 82 (98)
T 1czp_A 16 HEIEVPDDEYIL-DAAEEQGYDLPF------SCR-AGACSTCAGKLVSGTVDQ-----SDQSFLDDDQIEAGYVLTCVAY 82 (98)
T ss_dssp EEEEEETTSCHH-HHHHHTTCCCCC------SSS-SSSSSTTEEEEEESCEEC-----TTCCSSCHHHHHTTEEEGGGCE
T ss_pred EEEEeCCCCCHH-HHHHHcCCCccC------CCC-CCCCCCCeEEEccCCcCc-----cccccCCHHHhhCCeEEeeeCE
Confidence 578899999999 999999999998 698 999999999999998532 334566642 57899999999
Q ss_pred eeeccCCCceEEEEcchH
Q 029865 154 VGNKENSGKCRIKYLKVE 171 (186)
Q Consensus 154 v~~~~~~gdv~V~~lP~~ 171 (186)
+. ++++| .+|+.
T Consensus 83 ~~-----~d~~v-~~~~~ 94 (98)
T 1czp_A 83 PT-----SDVVI-QTHKE 94 (98)
T ss_dssp ES-----SCEEE-ECCCT
T ss_pred EC-----CCEEE-Eeccc
Confidence 98 78774 66654
No 14
>1frd_A Heterocyst [2Fe-2S] ferredoxin; electron transport; 1.70A {Nostoc SP} SCOP: d.15.4.1
Probab=99.65 E-value=7.2e-17 Score=117.92 Aligned_cols=78 Identities=23% Similarity=0.446 Sum_probs=63.9
Q ss_pred EEEEecCCchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEecCcccCCCCChHHHhccCCC--CCCeEEeeEeE
Q 029865 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTI 153 (186)
Q Consensus 76 ~~v~v~~G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~--~~g~RLACQ~~ 153 (186)
+++++++|+||| ++++++||++++ .|+ .|.||+|+|+|.+|.... .|...|+.. .+++||+||++
T Consensus 16 ~~~~~~~g~tlL-~a~~~~gi~i~~------~C~-~G~Cg~C~v~v~~G~~~~-----~e~~~L~~~e~~~g~~LaC~~~ 82 (98)
T 1frd_A 16 TTIEIDEETTIL-DGAEENGIELPF------SCH-SGSCSSCVGKVVEGEVDQ-----SDQIFLDDEQMGKGFALLCVTY 82 (98)
T ss_dssp EEEEEETTSCHH-HHHHHTTCCCCC------SSS-SSSSSTTEEEEEESCEEC-----TTCCSCCHHHHHTTEEEGGGCE
T ss_pred EEEEeCCCCcHH-HHHHHcCCCccc------CCC-CCCCCCCEEEEEeCCccc-----cccccCCHHHhhCCcEEEeECE
Confidence 588999999999 999999999998 698 999999999999997532 334566653 57899999999
Q ss_pred eeeccCCCceEEEEcchHh
Q 029865 154 VGNKENSGKCRIKYLKVEA 172 (186)
Q Consensus 154 v~~~~~~gdv~V~~lP~~~ 172 (186)
+. ++++| .+|..+
T Consensus 83 ~~-----~d~~v-~~~~~~ 95 (98)
T 1frd_A 83 PR-----SNCTI-KTHQEP 95 (98)
T ss_dssp ES-----SSEEE-ECCCGG
T ss_pred EC-----CCEEE-Eecchh
Confidence 98 77774 666543
No 15
>1iue_A Ferredoxin; electron transport, iron-sulfur; 1.70A {Plasmodium falciparum} SCOP: d.15.4.1
Probab=99.65 E-value=8.5e-17 Score=118.02 Aligned_cols=78 Identities=26% Similarity=0.521 Sum_probs=64.1
Q ss_pred EEEEecCCchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEecCcccCCCCChHHHhccCCC--CCCeEEeeEeE
Q 029865 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTI 153 (186)
Q Consensus 76 ~~v~v~~G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~--~~g~RLACQ~~ 153 (186)
+++++++|+||| ++++++|+++++ .|+ .|.||+|+|+|++|... ..|...|+.. ++|+||+||++
T Consensus 14 ~~~~~~~g~tlL-~a~~~~gi~i~~------~C~-~G~Cg~C~v~v~~G~~~-----~~e~~~L~~~e~~~g~~LaCq~~ 80 (98)
T 1iue_A 14 KKIECNEDEYIL-DASERQNVELPY------SCR-GGSCSTCAAKLVEGEVD-----NDDQSYLDEEQIKKKYILLCTCY 80 (98)
T ss_dssp EEEEEETTSCHH-HHHHHTTCCCCC------SSC-SSSSSTTEEEEEESCEE-----CTTCCSSCHHHHHTTEEEGGGCE
T ss_pred EEEEeCCCCcHH-HHHHHcCCCCCC------CCC-CCcCCCCEEEEeeCCcc-----ccccccCCHHHHhCCeEEEeECE
Confidence 578899999999 999999999998 698 99999999999999753 2345566643 57899999999
Q ss_pred eeeccCCCceEEEEcchHh
Q 029865 154 VGNKENSGKCRIKYLKVEA 172 (186)
Q Consensus 154 v~~~~~~gdv~V~~lP~~~ 172 (186)
+. ++++| .+|+.+
T Consensus 81 ~~-----~d~~i-~~~~~~ 93 (98)
T 1iue_A 81 PK-----SDCVI-ETHKED 93 (98)
T ss_dssp ES-----SCEEE-ECCCHH
T ss_pred EC-----CCeEE-EeCChH
Confidence 98 78874 666544
No 16
>1awd_A Ferredoxin; electron transport, eukaryotic, green ALGA, electron transfer, metalloprotein; 1.40A {'chlorella' fusca} SCOP: d.15.4.1
Probab=99.65 E-value=9.1e-17 Score=116.89 Aligned_cols=78 Identities=18% Similarity=0.367 Sum_probs=64.0
Q ss_pred EEEEecCCchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEecCcccCCCCChHHHhccCCC--CCCeEEeeEeE
Q 029865 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTI 153 (186)
Q Consensus 76 ~~v~v~~G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~--~~g~RLACQ~~ 153 (186)
+++++.+|+||| ++|+++|+.+++ .|+ .|.||+|+|+|++|.... .|...|++. .+++||+||++
T Consensus 12 ~~~~~~~g~tlL-~a~~~~gi~i~~------~C~-~G~Cg~C~v~v~~G~~~~-----~e~~~L~~~e~~~g~~LaCq~~ 78 (94)
T 1awd_A 12 ETIECPEDTYIL-DAAEEAGLDLPY------SCR-AGACSSCAGKVESGEVDQ-----SDQSFLDDAQMGKGFVLTCVAY 78 (94)
T ss_dssp EEEECCTTSCHH-HHHHHTTCCCCC------SSS-SSSSSTTEEEEEESCEEC-----TTCCSSCHHHHHTTEEEGGGCE
T ss_pred EEEEECCCCcHH-HHHHHcCCCCCc------CCC-CCcCCCCEEEEEeCCcCc-----cccccCCHHHHhCCcEEeeECE
Confidence 578999999999 999999999998 698 999999999999997532 345566642 57899999999
Q ss_pred eeeccCCCceEEEEcchHh
Q 029865 154 VGNKENSGKCRIKYLKVEA 172 (186)
Q Consensus 154 v~~~~~~gdv~V~~lP~~~ 172 (186)
+. ++++| .+|+.+
T Consensus 79 ~~-----~d~~i-~~~~~~ 91 (94)
T 1awd_A 79 PT-----SDVTI-LTHQEA 91 (94)
T ss_dssp ES-----SCEEE-ECCCGG
T ss_pred EC-----CCEEE-Eecchh
Confidence 98 78875 666543
No 17
>1a70_A Ferredoxin; iron-sulfur protein, photosynthesis, electron transport; 1.70A {Spinacia oleracea} SCOP: d.15.4.1 PDB: 1pfd_A
Probab=99.65 E-value=8.4e-17 Score=117.85 Aligned_cols=77 Identities=19% Similarity=0.368 Sum_probs=63.6
Q ss_pred EEEEecCCchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEecCcccCCCCChHHHhccCCC--CCCeEEeeEeE
Q 029865 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTI 153 (186)
Q Consensus 76 ~~v~v~~G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~--~~g~RLACQ~~ 153 (186)
+++++.+|+||| ++|+++|+.+++ .|+ .|.||+|+|+|.+|.... .|...|+.. ++|+||+||++
T Consensus 14 ~~~~~~~g~tlL-~a~~~~gi~i~~------~C~-~G~Cg~C~v~v~~G~~~~-----~e~~~L~~~e~~~g~~LaCq~~ 80 (97)
T 1a70_A 14 VEFQCPDDVYIL-DAAEEEGIDLPY------SCR-AGSCSSCAGKLKTGSLNQ-----DDQSFLDDDQIDEGWVLTCAAY 80 (97)
T ss_dssp EEEEEETTSCHH-HHHHHTTCCCCC------SSS-SSCSSTTEEEEEESCEEC-----TTCCSSCHHHHHHTEEEGGGCE
T ss_pred EEEEeCCCCcHH-HHHHHcCCCccc------CCC-CcCCCCCeEEEccCCcCc-----cccccCCHHHhhCCeEEEeECE
Confidence 578899999999 999999999998 698 999999999999997532 345566643 57899999999
Q ss_pred eeeccCCCceEEEEcchH
Q 029865 154 VGNKENSGKCRIKYLKVE 171 (186)
Q Consensus 154 v~~~~~~gdv~V~~lP~~ 171 (186)
+. ++++| .+|+.
T Consensus 81 ~~-----~d~~v-~~~~~ 92 (97)
T 1a70_A 81 PV-----SDVTI-ETHKK 92 (97)
T ss_dssp ES-----SCEEE-ECCCG
T ss_pred EC-----CCEEE-EeCch
Confidence 98 77774 66654
No 18
>1jq4_A Methane monooxygenase component C; [2Fe-2S] ferredoxin, oxidoreductase; NMR {Methylococcus capsulatus str} SCOP: d.15.4.2
Probab=99.63 E-value=2.5e-17 Score=120.58 Aligned_cols=78 Identities=26% Similarity=0.366 Sum_probs=64.0
Q ss_pred EEEEecCCchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEecCcccCCCCChHHHhccCCC--CCCeEEeeEeE
Q 029865 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTI 153 (186)
Q Consensus 76 ~~v~v~~G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~--~~g~RLACQ~~ 153 (186)
+++++.+|+||| ++|+++|+++++ .| |.|.||+|+|+|.+|...+. +.|...|+.. .+++||+||++
T Consensus 17 ~~~~~~~g~tlL-~a~~~~gi~i~~------~C-~~G~Cg~C~v~v~~G~~~~~---~~e~~~L~~~~~~~g~~LaCq~~ 85 (98)
T 1jq4_A 17 LRFECRSDEDVI-TAALRQNIFLMS------SC-REGGCATCKALCSEGDYDLK---GCSVQALPPEEEEEGLVLLCRTY 85 (98)
T ss_dssp EEEEEESCCTHH-HHHHHHTCCCCC------SC-CSSCCCCCCBCEEECCCCCC---CSCTTTSCHHHHHHHCBCTTTCC
T ss_pred EEEEeCCCChHH-HHHHHcCCCCcC------CC-CCCCCCCCEEEEEcCccccC---cccccccCHHHhcCCcEEEeeCE
Confidence 588999999999 999999999998 69 59999999999999986432 3455667653 57899999999
Q ss_pred eeeccCCCceEEEEcch
Q 029865 154 VGNKENSGKCRIKYLKV 170 (186)
Q Consensus 154 v~~~~~~gdv~V~~lP~ 170 (186)
+. ++++| .+|+
T Consensus 86 ~~-----~d~~v-~~~~ 96 (98)
T 1jq4_A 86 PK-----TDLEI-ELPY 96 (98)
T ss_dssp SS-----CCSEE-ECSC
T ss_pred EC-----CCEEE-EecC
Confidence 98 67774 6664
No 19
>1frr_A Ferredoxin I; electron transfer(iron-sulfur protein); 1.80A {Equisetum arvense} SCOP: d.15.4.1
Probab=99.63 E-value=1.6e-16 Score=115.09 Aligned_cols=76 Identities=20% Similarity=0.361 Sum_probs=62.6
Q ss_pred EEEEecCCchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEecCcccCCCCChHHHhccCCC--CCCeEEeeEeE
Q 029865 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTI 153 (186)
Q Consensus 76 ~~v~v~~G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~--~~g~RLACQ~~ 153 (186)
+++++.+|+||| ++|+++||++++ .|+ .|.||+|+|+|.+|.... .|...|++. .+++||+||++
T Consensus 13 ~~~~~~~g~tlL-~a~~~~gi~i~~------~C~-~G~Cg~C~v~v~~G~~~~-----~~~~~L~~~~~~~g~~LaC~~~ 79 (95)
T 1frr_A 13 FTLDVPEGTTIL-DAAEEAGYDLPF------SCR-AGACSSCLGKVVSGSVDE-----SEGSFLDDGQMEEGFVLTCIAI 79 (95)
T ss_dssp EEEEECTTCCHH-HHHHHTTCCCCC------SSS-SSSSSTTEEEEEESCEEC-----TTCCSCCHHHHHTTEEETTTCE
T ss_pred EEEEeCCCCcHH-HHHHHcCCCCCC------CCC-CcCCCCCEEEEEeCCccc-----cccccCCHHHHhCCcEEeeECE
Confidence 578999999999 999999999998 698 999999999999997532 234566542 57899999999
Q ss_pred eeeccCCCceEEEEcch
Q 029865 154 VGNKENSGKCRIKYLKV 170 (186)
Q Consensus 154 v~~~~~~gdv~V~~lP~ 170 (186)
+. ++++| .+|.
T Consensus 80 ~~-----~~~~v-~~~~ 90 (95)
T 1frr_A 80 PE-----SDLVI-ETHK 90 (95)
T ss_dssp ES-----SCEEE-ECCC
T ss_pred EC-----CCEEE-EEcc
Confidence 98 68875 5554
No 20
>1wri_A Ferredoxin II, ferredoxin; electron transport; 1.20A {Equisetum arvense} SCOP: d.15.4.1
Probab=99.62 E-value=1.9e-16 Score=115.09 Aligned_cols=76 Identities=24% Similarity=0.430 Sum_probs=62.9
Q ss_pred EEEEecCCchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEecCcccCCCCChHHHhccCCC--CCCeEEeeEeE
Q 029865 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTI 153 (186)
Q Consensus 76 ~~v~v~~G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~--~~g~RLACQ~~ 153 (186)
+++++.+|+||| ++++++| .+++ .|+ .|.||+|+|+|.+|.... .|...|+.. .+||||+||++
T Consensus 13 ~~~~~~~g~tlL-~a~~~~g-~i~~------~C~-~G~Cg~C~v~v~~G~~~~-----~e~~~L~~~~~~~g~~LaCq~~ 78 (93)
T 1wri_A 13 ITFDVEPGERLI-DIGSEKA-DLPL------SCQ-AGACSTCLGKIVSGTVDQ-----SEGSFLDDEQIEQGYVLTCIAI 78 (93)
T ss_dssp EEEEECTTSCHH-HHHHHHS-CCCC------SSS-SSSSSTTEEEEEESCEEC-----TTCCSCCHHHHHTTEEETTTCE
T ss_pred EEEEECCCCcHH-HHHHHCc-CCCC------CCC-CCCCCCCEEEEecCccCc-----cccccCCHHHHhCCcEEeeeCE
Confidence 578999999999 9999999 9998 698 999999999999997532 345666643 57899999999
Q ss_pred eeeccCCCceEEEEcchH
Q 029865 154 VGNKENSGKCRIKYLKVE 171 (186)
Q Consensus 154 v~~~~~~gdv~V~~lP~~ 171 (186)
+. +|++ +.+|+.
T Consensus 79 ~~-----~d~~-v~~~~~ 90 (93)
T 1wri_A 79 PE-----SDVV-IETHKE 90 (93)
T ss_dssp ES-----SCEE-EECCCG
T ss_pred EC-----CCEE-EEeccc
Confidence 98 7877 477754
No 21
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.57 E-value=1.1e-15 Score=131.76 Aligned_cols=81 Identities=21% Similarity=0.313 Sum_probs=67.2
Q ss_pred EEEEecCCchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEecCcccCCCCChHHHhccCCC--CCCeEEeeEeE
Q 029865 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTI 153 (186)
Q Consensus 76 ~~v~v~~G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~--~~g~RLACQ~~ 153 (186)
+++++.+|+||| ++++++||++++ .|+ .|.||+|+|+|.+|+..++ |.+.|...|++. .+|+||+||++
T Consensus 16 ~~~~~~~g~tll-~a~~~~gi~i~~------~C~-~g~Cg~C~v~v~~G~~~~~-~~~~~~~~l~~~~~~~g~~LaCq~~ 86 (338)
T 1krh_A 16 RFICIAQGETLS-DAAYRQQINIPM------DCR-EGECGTCRAFCESGNYDMP-EDNYIEDALTPEEAQQGYVLACQCR 86 (338)
T ss_dssp EEEEECTTCCHH-HHHHHTTCCCSC------SCS-SSSSCTTEEEEEECCEECC-GGGSCTTTCCHHHHHHTEEETTTCE
T ss_pred EEEEeCCCCcHH-HHHHHcCCCccc------CCC-CcCCCCCEEEEecCcEecc-cCccccccCCHHHHhCCeEEEEeCE
Confidence 689999999999 999999999998 698 9999999999999986543 244567778753 67899999999
Q ss_pred eeeccCCCceEEEEcchH
Q 029865 154 VGNKENSGKCRIKYLKVE 171 (186)
Q Consensus 154 v~~~~~~gdv~V~~lP~~ 171 (186)
+. ++++| .+|+.
T Consensus 87 ~~-----~~~~v-~~~~~ 98 (338)
T 1krh_A 87 PT-----SDAVF-QIQAS 98 (338)
T ss_dssp ES-----SSEEE-EESSC
T ss_pred EC-----CCeEE-EEecc
Confidence 98 67775 56654
No 22
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=99.51 E-value=5.2e-15 Score=140.16 Aligned_cols=79 Identities=24% Similarity=0.522 Sum_probs=66.3
Q ss_pred EEEEecCCchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEecCcccCCCCChHHHhccCCC--CCCeEEeeEeE
Q 029865 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTI 153 (186)
Q Consensus 76 ~~v~v~~G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~--~~g~RLACQ~~ 153 (186)
+++++++|+||| ++++++|+++++ .|+|.|.||||+|+|.+|++.. .|...|++. ++++||+||++
T Consensus 13 ~~v~v~~G~tLL-eAa~~aGi~ip~------~C~G~G~CGtC~v~V~~G~v~~-----~e~~~Ls~~e~~~G~rLaCqa~ 80 (631)
T 3zyy_X 13 KEVAISENTNLM-EALNLAGINIKT------VCGGAGTCGKCLVRVVDGQKRV-----ESYGKLKQEEIAQGYVLACQTY 80 (631)
T ss_dssp EEEEECTTSCHH-HHHHHHTCCCCC------SCCCSSCCSTTEEEEEESCEEE-----SCCTTCCHHHHHTTEEETTTEE
T ss_pred eEEEECCCCcHH-HHHHHcCCCCCc------CCCCCCcCCCCEEEEeeCcccc-----cccccCCHHHhcCCcEEeeeCE
Confidence 589999999999 999999999998 6999999999999999998532 234566642 67999999999
Q ss_pred eeeccCCCceEEEEcchHh
Q 029865 154 VGNKENSGKCRIKYLKVEA 172 (186)
Q Consensus 154 v~~~~~~gdv~V~~lP~~~ 172 (186)
+. +|++ +.+|+.+
T Consensus 81 ~~-----sDl~-Ielp~~~ 93 (631)
T 3zyy_X 81 PE-----SDLI-IEIPFDS 93 (631)
T ss_dssp EC-----SSEE-EECCTTS
T ss_pred EC-----CCEE-EEecchh
Confidence 98 7887 5777653
No 23
>1doi_A 2Fe-2S ferredoxin; halophilic protein, redox protein, iron-sulfur, electron transport; 1.90A {Haloarcula marismortui} SCOP: d.15.4.1 PDB: 1e0z_A* 1e10_A
Probab=99.50 E-value=9e-15 Score=113.14 Aligned_cols=66 Identities=18% Similarity=0.360 Sum_probs=56.7
Q ss_pred EEEecCCchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEecCcccCCCCChHHHhccCC---CCCCeEEeeEeE
Q 029865 77 RAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK---KPESWRLACQTI 153 (186)
Q Consensus 77 ~v~v~~G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~---~~~g~RLACQ~~ 153 (186)
++++++|+||| ++++++|+++++ .|+ .|.||+|+|+|++|.... .|...|+. .++++||+||++
T Consensus 39 ~v~v~~g~tlL-~aa~~~Gi~i~~------~C~-~G~CgtC~v~v~~G~v~~-----~e~~~L~~~e~~~~g~rLaCq~~ 105 (128)
T 1doi_A 39 SLEVNEGEYIL-EAAEAQGYDWPF------SCR-AGACANCAAIVLEGDIDM-----DMQQILSDEEVEDKNVRLTCIGS 105 (128)
T ss_dssp EEECCTTSCHH-HHHHHTTCCCCC------SSS-SSSSSTTEEEEEESCEEE-----CCCSSSCHHHHHTSCEEEGGGEE
T ss_pred EEEECCCCcHH-HHHHHcCCCCcc------CCC-ccCCCCCEeEEecCCcCc-----hhhccCCHhHhccCCEEEEEEeE
Confidence 78899999999 999999999998 695 999999999999998532 24556765 368999999999
Q ss_pred ee
Q 029865 154 VG 155 (186)
Q Consensus 154 v~ 155 (186)
+.
T Consensus 106 ~~ 107 (128)
T 1doi_A 106 PD 107 (128)
T ss_dssp EC
T ss_pred Ec
Confidence 98
No 24
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.43 E-value=2.5e-13 Score=116.82 Aligned_cols=70 Identities=14% Similarity=0.366 Sum_probs=58.4
Q ss_pred EEEecCCchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEecCcccCCCCChHHHhccCCC-CCCeEEeeEeEee
Q 029865 77 RAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK-PESWRLACQTIVG 155 (186)
Q Consensus 77 ~v~v~~G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~-~~g~RLACQ~~v~ 155 (186)
++++.+|+||| ++++++|+++++ +|+ .|.||+|+++|++|.+... ...|++. .++++|+||+++.
T Consensus 248 ~~~~~~~~~ll-~a~~~~g~~~~~------~C~-~G~Cg~C~~~v~~G~~~~~------~~~l~~~e~~g~~L~C~~~~~ 313 (321)
T 2pia_A 248 SFEIPANRSIL-EVLRDANVRVPS------SCE-SGTCGSCKTALCSGEADHR------DMVLRDDEKGTQIMVCVSRAK 313 (321)
T ss_dssp EEEECTTSCHH-HHHHHTTCCCCC------SCS-SSSSCTTEEEEEESCEECC------CSSCCTTTTTTEEETTTCEES
T ss_pred EEEECCCCcHH-HHHHHcCCCCCC------CCC-CCCCCCCEEEEecCccccc------cCCCChHHHCCeEEEeEeEEC
Confidence 78899999999 999999999998 695 9999999999999986432 1456653 2899999999998
Q ss_pred eccCCCc-eEE
Q 029865 156 NKENSGK-CRI 165 (186)
Q Consensus 156 ~~~~~gd-v~V 165 (186)
+| ++|
T Consensus 314 -----~d~~~i 319 (321)
T 2pia_A 314 -----SAELVL 319 (321)
T ss_dssp -----SSEEEE
T ss_pred -----CCcEEE
Confidence 66 653
No 25
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=98.68 E-value=1.7e-08 Score=83.82 Aligned_cols=88 Identities=16% Similarity=0.281 Sum_probs=60.9
Q ss_pred cEEEEEecCCCC-CCCCcceEEEEecCCchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEecCcccCCCCChHH
Q 029865 57 EIELEFIAPRAG-DDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTE 135 (186)
Q Consensus 57 ~V~v~f~~~~~~-~d~~~~v~~v~v~~G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~E 135 (186)
+++|..++++.+ ....|+.+++++.+|+||| ++|++.|+.+...+....+|+ .|.||+|.|+| +|.
T Consensus 6 ~~~i~R~~~~~~~~~~~~~~~~v~~~~~~tlL-~~l~~~~~~~~~~l~~~~~c~-~g~Cg~C~v~i-~G~---------- 72 (241)
T 2bs2_B 6 TIRVFKYDPQSAVSKPHFQEYKIEEAPSMTIF-IVLNMIRETYDPDLNFDFVCR-AGICGSCGMMI-NGR---------- 72 (241)
T ss_dssp EEEEEECCTTCTTCCCEEEEEEEECCTTCBHH-HHHHHHHHHTCTTCCCCCSSS-SSSSCTTEEEE-TTE----------
T ss_pred EEEEEEeCCCCCCCCceEEEEEEeCCCCChHH-HHHHHhchhcCCCCccCCCCC-CCCCCCCEeEE-CCC----------
Confidence 455666666543 3345778899999999999 999987643222223345797 99999999999 675
Q ss_pred HhccCCCCCCeEEeeEeEeeeccCCCc-eEEEEcc
Q 029865 136 LRYLKKKPESWRLACQTIVGNKENSGK-CRIKYLK 169 (186)
Q Consensus 136 ~~~L~~~~~g~RLACQ~~v~~~~~~gd-v~V~~lP 169 (186)
.+|||++.+. +.+|+ ++|+.++
T Consensus 73 ----------~~~aC~~~~~--~~~g~~~~ie~l~ 95 (241)
T 2bs2_B 73 ----------PSLACRTLTK--DFEDGVITLLPLP 95 (241)
T ss_dssp ----------EEEGGGCBGG--GCTTSEEEEECCT
T ss_pred ----------eecchhCcHh--HcCCCeEEEecCC
Confidence 3589999886 22333 6666555
No 26
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=98.56 E-value=4.8e-08 Score=81.06 Aligned_cols=88 Identities=18% Similarity=0.256 Sum_probs=62.0
Q ss_pred cEEEEEecCCCCCCCCcceEEEEecCCchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEecCcccCCCCChHHH
Q 029865 57 EIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTEL 136 (186)
Q Consensus 57 ~V~v~f~~~~~~~d~~~~v~~v~v~~G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~E~ 136 (186)
+++|..++++.+....|+..++++.+|+||| ++|+++|+.....+.....|+ .|.||+|.|+| +|.
T Consensus 7 ~~~i~R~~~~~~~~~~~~~~~~~~~~~~tll-~al~~~~~~~~p~l~~~~~c~-~G~Cg~C~v~v-~G~----------- 72 (243)
T 1kf6_B 7 KIEVVRYNPEVDTAPHSAFYEVPYDATTSLL-DALGYIKDNLAPDLSYRWSCR-MAICGSCGMMV-NNV----------- 72 (243)
T ss_dssp EEEEEECCTTTCSSCEEEEEEEEECTTCBHH-HHHHHHHHHTCTTCCCCCCCS-SSSSCCCEEEE-TTE-----------
T ss_pred EEEEEEcCCCCCCCCeeEEEEEecCCCChHH-HHHHHcCcccCCCcccccCCC-CCcCCCCEeEE-CCE-----------
Confidence 4666666665433456888899999999999 999999954112233446895 99999999996 464
Q ss_pred hccCCCCCCeEEeeEeEeeeccCCCceEEEEcc
Q 029865 137 RYLKKKPESWRLACQTIVGNKENSGKCRIKYLK 169 (186)
Q Consensus 137 ~~L~~~~~g~RLACQ~~v~~~~~~gdv~V~~lP 169 (186)
.+|||++.+.. ..+.++|..++
T Consensus 73 ---------~~~aC~~~~~~--~~~~~~i~~l~ 94 (243)
T 1kf6_B 73 ---------PKLACKTFLRD--YTDGMKVEALA 94 (243)
T ss_dssp ---------EEEGGGCBGGG--CTTCEEEECCT
T ss_pred ---------EEeeeeeEHhh--CCCcEEEEecC
Confidence 48899998862 11236666654
No 27
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=98.55 E-value=6.8e-08 Score=79.92 Aligned_cols=89 Identities=22% Similarity=0.278 Sum_probs=61.6
Q ss_pred cEEEEEecCCCCCCCCcceEEEEecC--CchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEecCcccCCCCChH
Q 029865 57 EIELEFIAPRAGDDGSYPVERAKAIS--GEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNT 134 (186)
Q Consensus 57 ~V~v~f~~~~~~~d~~~~v~~v~v~~--G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~ 134 (186)
+++|..++++.+....|+.+++++++ |+||| ++|++.++.. ..++...+|+ .|.||+|.|.| +|.
T Consensus 4 ~~~i~R~~~~~~~~~~~~~~~v~~~~~~~~tll-~~l~~~~~~~-~~l~~~~~C~-~g~Cg~C~v~v-~G~--------- 70 (238)
T 2wdq_B 4 EFSIYRYNPDVDDAPRMQDYTLEADEGRDMMLL-DALIQLKEKD-PSLSFRRSCR-EGVCGSDGLNM-NGK--------- 70 (238)
T ss_dssp EEEEEECCTTTCSSCEEEEEEEECCTTCCCBHH-HHHHHHHHHC-TTCCCCCSSS-SSSSCTTEEEE-TTE---------
T ss_pred EEEEEEcCCCCCCCCceEEEEeecCCCCCChHH-HHHHHhcccC-CCccccccCC-CCCCCCCEEEE-CCE---------
Confidence 45666666654333457788999999 99999 9999988542 1244456898 89999999998 454
Q ss_pred HHhccCCCCCCeEEeeEeEeee-ccCCCceEEEEcc
Q 029865 135 ELRYLKKKPESWRLACQTIVGN-KENSGKCRIKYLK 169 (186)
Q Consensus 135 E~~~L~~~~~g~RLACQ~~v~~-~~~~gdv~V~~lP 169 (186)
.+|||++.+.. ...++.++|+.|+
T Consensus 71 -----------~~laC~~~~~~~g~~~~~~~ie~l~ 95 (238)
T 2wdq_B 71 -----------NGLACITPISALNQPGKKIVIRPLP 95 (238)
T ss_dssp -----------EEEGGGCBGGGTCCTTSCEEEECCT
T ss_pred -----------EEcccccchhhhccCCCCEEEeeCC
Confidence 36789988861 0212346666554
No 28
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=98.42 E-value=4.8e-07 Score=78.23 Aligned_cols=91 Identities=23% Similarity=0.351 Sum_probs=63.4
Q ss_pred CcEEEEEecCCC-CCCCCcceEEEEecC-CchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEecCcccCCCCCh
Q 029865 56 PEIELEFIAPRA-GDDGSYPVERAKAIS-GEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTN 133 (186)
Q Consensus 56 ~~V~v~f~~~~~-~~d~~~~v~~v~v~~-G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~ 133 (186)
-+++|..++++. +....|+..++++.+ |+||| ++|++.+..+...++...+|+ .|.||+|.|.|. |.
T Consensus 36 ~~~~I~R~~p~~~~~~p~~~~~~v~v~~~~~tlL-daL~~i~~~~~ptl~~~~~C~-~G~CGsC~V~In-G~-------- 104 (282)
T 3vr8_B 36 KTFEIYRFNPEEPGAKPKLQKFDVDLDKCGTMVL-DALIKIKNEVDPTLTFRRSCR-EGICGSCAMNIA-GE-------- 104 (282)
T ss_pred EEEEEEEeCCCCCCCCCCcEEEEEEeCCCCCcHH-HHHHhcCcccCCceeecCCCC-CCCCCCCEEEEC-CE--------
Confidence 456777777763 223557778899998 99999 999998875433345556898 799999999875 64
Q ss_pred HHHhccCCCCCCeEEeeEeEeeeccCCCceEEEEcch
Q 029865 134 TELRYLKKKPESWRLACQTIVGNKENSGKCRIKYLKV 170 (186)
Q Consensus 134 ~E~~~L~~~~~g~RLACQ~~v~~~~~~gdv~V~~lP~ 170 (186)
.+|||.+.+. ......++|+.||.
T Consensus 105 ------------~~laC~t~v~-~~~~~~~tIepL~~ 128 (282)
T 3vr8_B 105 ------------NTLACICNID-QNTSKTTKIYPLPH 128 (282)
T ss_pred ------------EecchhhhHh-HhcCCcEEeccCCC
Confidence 3678887775 22233456666654
No 29
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=98.41 E-value=2.3e-07 Score=77.81 Aligned_cols=89 Identities=21% Similarity=0.325 Sum_probs=61.2
Q ss_pred cEEEEEecCCCCC-CCCcceEEEEecC-CchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEecCcccCCCCChH
Q 029865 57 EIELEFIAPRAGD-DGSYPVERAKAIS-GEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNT 134 (186)
Q Consensus 57 ~V~v~f~~~~~~~-d~~~~v~~v~v~~-G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~ 134 (186)
+++|..++++.+. ...|+.+++++.+ |+||| ++|++.|+.....+.....|+ .|.||+|.|.| +|.
T Consensus 13 ~~~i~R~~~~~~~~~~~~~~~~v~~~~~~~tlL-d~l~~~~~~~~p~l~~~~~c~-~g~Cg~C~v~i-~G~--------- 80 (252)
T 2h88_B 13 KFSIYRWDPDKPGDKPRMQTYEVDLNKCGPMVL-DALIKIKNELDSTLTFRRSCR-EGICGSCAMNI-AGG--------- 80 (252)
T ss_dssp EEEEEECCTTSTTSCCEEEEEEEEGGGSCSBHH-HHHHHHHHHTCTTCCCCCSCS-SSSSCTTEEEE-TTE---------
T ss_pred EEEEEEeCCCCCCCCceEEEEEEecCCCCChHH-HHHHHhCcccCCCccccCCCC-CCCCCCCEEEE-CCc---------
Confidence 4566666654422 2357778899988 99999 999998753221223345797 99999999996 454
Q ss_pred HHhccCCCCCCeEEeeEeEeeeccCCC-ceEEEEcch
Q 029865 135 ELRYLKKKPESWRLACQTIVGNKENSG-KCRIKYLKV 170 (186)
Q Consensus 135 E~~~L~~~~~g~RLACQ~~v~~~~~~g-dv~V~~lP~ 170 (186)
.+|||++.+. +.+| .++|+.|+.
T Consensus 81 -----------~~~aC~~~~~--~~~g~~~~iepl~~ 104 (252)
T 2h88_B 81 -----------NTLACTKKID--PDLSKTTKIYPLPH 104 (252)
T ss_dssp -----------EEEGGGSBCC--CCTTSCEEEECSTT
T ss_pred -----------EEccccCCHh--HcCCCceEEecccC
Confidence 5789999886 2333 467776663
No 30
>1t3q_A Quinoline 2-oxidoreductase small subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: a.56.1.1 d.15.4.2
Probab=98.04 E-value=3.7e-06 Score=67.21 Aligned_cols=56 Identities=21% Similarity=0.377 Sum_probs=44.5
Q ss_pred EEEEecCCchHHHHHHHHC-CCC-ccccCCcccCCCCceeecCCEEEEecCcccCCCCChHHHhccCCCCCCeEEeeEeE
Q 029865 76 ERAKAISGEKLLRNIMLDN-KIE-LYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTI 153 (186)
Q Consensus 76 ~~v~v~~G~tLLr~al~~~-GI~-l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLACQ~~ 153 (186)
.++++.+|+||| ++|+++ |+. +.. .|+ .|.||+|.|.| +|. .++||++.
T Consensus 21 ~~~~v~~~~tlL-~~Lr~~~gl~g~~~------~C~-~G~CGaC~V~v-dG~--------------------~v~sC~~~ 71 (168)
T 1t3q_A 21 RVFYVEPRMHLA-DALREVVGLTGTKI------GCE-QGVCGSCTILI-DGA--------------------PMRSCLTL 71 (168)
T ss_dssp EEEEECTTSBHH-HHHHHTTCCTTSCC------SCS-SSSSCTTEEEE-TTE--------------------EEEGGGSB
T ss_pred EEEecCCCCcHH-HHHHhcCCCCcccc------CCC-CCCCCCcEEEE-CCC--------------------EeechhhH
Confidence 467789999999 999996 887 544 698 99999999999 564 47899998
Q ss_pred eeeccCCCc
Q 029865 154 VGNKENSGK 162 (186)
Q Consensus 154 v~~~~~~gd 162 (186)
+. +.+|.
T Consensus 72 ~~--~~~G~ 78 (168)
T 1t3q_A 72 AV--QAEGC 78 (168)
T ss_dssp GG--GGTTC
T ss_pred HH--HhCCC
Confidence 75 33454
No 31
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=98.01 E-value=8.2e-06 Score=78.43 Aligned_cols=75 Identities=19% Similarity=0.330 Sum_probs=51.2
Q ss_pred EEEEecCCchHHHHHHHHCCCCccccCCcccCC-----CCceeecCCEEEEecCcccCCCCChHHHh-ccCCC-------
Q 029865 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNC-----GGGGSCGTCIVEIIDGKDLLNERTNTELR-YLKKK------- 142 (186)
Q Consensus 76 ~~v~v~~G~tLLr~al~~~GI~l~~~~~~~~~C-----gG~G~CGTC~V~V~~G~~~l~~~t~~E~~-~L~~~------- 142 (186)
.++++++|+||| +|++++||++++ .| ++.|.|+.|.|+|..+.. +.+.. .+++.
T Consensus 9 ~~~~v~~g~til-~a~~~~gi~ip~------~C~~~~~~~~G~C~~C~V~v~~~~~------~~~g~~~~~~~G~~~~~~ 75 (783)
T 3i9v_3 9 RIVEVPPGTSVM-DAVFHAGYDVPL------FCSEKHLSPIGACRMCLVRIGLPKK------GPDGKPLLNEKGEPEIQW 75 (783)
T ss_dssp CEEEECTTCBHH-HHHHHTTCCCCC------SSCCTTSCCCCCSCCSEEEEECC-----------------------CCB
T ss_pred EEEEeCCCChHH-HHHHHhCCCccc------cCCCCCCCCCcccCCcEEEeccccc------cccccccccccccccccc
Confidence 378999999999 999999999998 58 458999999999963221 11111 11111
Q ss_pred CCCeEEeeEeEeeeccCCCceEEEEc
Q 029865 143 PESWRLACQTIVGNKENSGKCRIKYL 168 (186)
Q Consensus 143 ~~g~RLACQ~~v~~~~~~gdv~V~~l 168 (186)
..+..+||++.+. ..++|.+-
T Consensus 76 ~~~~~~aC~t~v~-----~gm~v~t~ 96 (783)
T 3i9v_3 76 QPKLAASCVTAVA-----DGMVVDTL 96 (783)
T ss_dssp CSSCEETTTCBCC-----SSEEEESS
T ss_pred CCCcccccCCCCC-----CCCEEEEC
Confidence 2357899999998 34555543
No 32
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=97.71 E-value=4.9e-05 Score=70.81 Aligned_cols=67 Identities=24% Similarity=0.368 Sum_probs=49.5
Q ss_pred EEEEecCCchHHHHHHHHCCCCccccCCcccCCCC-ceeecCCEEEEecCcccCCCCChHHHhccCCCCCCeEEeeEeEe
Q 029865 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGG-GGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154 (186)
Q Consensus 76 ~~v~v~~G~tLLr~al~~~GI~l~~~~~~~~~CgG-~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLACQ~~v 154 (186)
..+++++|+||| ++++++|+.+++. -....|++ .|.||.|.|+|. |. . .++||++.+
T Consensus 9 ~~v~v~~g~tiL-~a~~~~gi~ip~l-C~~~~~~~~~G~Cg~C~V~v~-g~------------------~-~~~aC~t~v 66 (574)
T 3c8y_A 9 VQFNTDEDTTIL-KFARDNNIDISAL-CFLNNCNNDINKCEICTVEVE-GT------------------G-LVTACDTLI 66 (574)
T ss_dssp EEEEECCCCBHH-HHHHHTTCCCCCS-SCBTTBCCSSSCCCTTEEEET-TT------------------E-EEEGGGCBC
T ss_pred EEEEeCCCCHHH-HHHHHcCCCCCcc-cCCCCCCCCcccCCCCEEEeC-CC------------------c-ccccCCCCc
Confidence 478899999999 9999999998872 00112337 899999999984 32 2 689999998
Q ss_pred eeccCCCceEEEEcc
Q 029865 155 GNKENSGKCRIKYLK 169 (186)
Q Consensus 155 ~~~~~~gdv~V~~lP 169 (186)
. ..++|.+..
T Consensus 67 ~-----~gm~V~T~~ 76 (574)
T 3c8y_A 67 E-----DGMIINTNS 76 (574)
T ss_dssp C-----TTCEEESSC
T ss_pred c-----cceeEEecc
Confidence 7 344556544
No 33
>1rm6_C 4-hydroxybenzoyl-COA reductase gamma subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: a.56.1.1 d.15.4.2 PDB: 1sb3_C*
Probab=97.55 E-value=8e-05 Score=59.25 Aligned_cols=57 Identities=32% Similarity=0.644 Sum_probs=43.0
Q ss_pred EEEEecCCchHHHHHHHHC-CCCccccCCcccCCCCceeecCCEEEEecCcccCCCCChHHHhccCCCCCCeEEeeEeEe
Q 029865 76 ERAKAISGEKLLRNIMLDN-KIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154 (186)
Q Consensus 76 ~~v~v~~G~tLLr~al~~~-GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLACQ~~v 154 (186)
+++++.+|++|| ++|++. |+. +....|+ .|.||.|.|.| +|. .++||++.+
T Consensus 14 ~~v~~~~~~tLL-~~Lr~~~gl~-----g~k~gC~-~G~CGaCtV~v-dG~--------------------~v~sC~~~~ 65 (161)
T 1rm6_C 14 REDLVPDNMLLL-DYLRETVGLT-----GTKQGCD-GGECGACTVLV-DDR--------------------PRLACSTLA 65 (161)
T ss_dssp EEEEEETTCBHH-HHHHHTTCCT-----TSCCCSS-SSSSCTTEEEE-TTE--------------------EEEGGGSBG
T ss_pred EEEecCCcCcHH-HHHHHcCCCc-----ccccCCC-CCCCCCCEEEE-CCc--------------------EEechHHHH
Confidence 466788999999 999986 542 2345798 89999999999 454 478999987
Q ss_pred eeccCCCc
Q 029865 155 GNKENSGK 162 (186)
Q Consensus 155 ~~~~~~gd 162 (186)
. +.+|.
T Consensus 66 ~--~~~G~ 71 (161)
T 1rm6_C 66 H--QVAGK 71 (161)
T ss_dssp G--GGTTS
T ss_pred H--HhCCc
Confidence 5 33454
No 34
>3hrd_D Nicotinate dehydrogenase small FES subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=96.84 E-value=0.0022 Score=51.18 Aligned_cols=52 Identities=21% Similarity=0.511 Sum_probs=39.9
Q ss_pred EEEEecCCchHHHHHHHHC-CCCccccCCcccCCCCceeecCCEEEEecCcccCCCCChHHHhccCCCCCCeEEeeEeEe
Q 029865 76 ERAKAISGEKLLRNIMLDN-KIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154 (186)
Q Consensus 76 ~~v~v~~G~tLLr~al~~~-GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLACQ~~v 154 (186)
+++++.++++|| ++|++. |+. +....|+ .|.||.|.|.|. |. .+++|.+.+
T Consensus 15 ~~v~v~p~~tLL-d~LR~~lglt-----gtk~gC~-~G~CGACtV~vd-G~--------------------~v~sC~~~~ 66 (160)
T 3hrd_D 15 RSIVTEPNKRLL-DLLREDFGLT-----SVKEGCS-EGECGACTVIFN-GD--------------------PVTTCCMLA 66 (160)
T ss_dssp EEEEECSSSBHH-HHHHTTSCCT-----TSCCSSS-SSSSCTTEEEET-TE--------------------EEEGGGSBG
T ss_pred EEEecCCCCCHH-HHHHHhcCCC-----ccccccC-CCCCCCCEEEEC-CE--------------------EEEchhhhh
Confidence 577899999999 999875 542 2234697 999999999985 43 477888877
Q ss_pred e
Q 029865 155 G 155 (186)
Q Consensus 155 ~ 155 (186)
.
T Consensus 67 ~ 67 (160)
T 3hrd_D 67 G 67 (160)
T ss_dssp G
T ss_pred h
Confidence 4
No 35
>1n62_A Carbon monoxide dehydrogenase small chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: a.56.1.1 d.15.4.2 PDB: 1n5w_A* 1n61_A* 1n60_A* 1n63_A* 1zxi_A*
Probab=96.78 E-value=0.0025 Score=50.94 Aligned_cols=57 Identities=19% Similarity=0.458 Sum_probs=42.1
Q ss_pred EEEEecCCchHHHHHHHHC-CCCccccCCcccCCCCceeecCCEEEEecCcccCCCCChHHHhccCCCCCCeEEeeEeEe
Q 029865 76 ERAKAISGEKLLRNIMLDN-KIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154 (186)
Q Consensus 76 ~~v~v~~G~tLLr~al~~~-GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLACQ~~v 154 (186)
+++++.++++|| ++|++. |+. +....|+ .|.||.|.|.|. |. .++||.+.+
T Consensus 15 ~~~~v~~~~tLL-d~LR~~lgl~-----g~k~gC~-~G~CGaCtV~vd-G~--------------------~v~SC~~~~ 66 (166)
T 1n62_A 15 VEALVEPRTLLI-HFIREQQNLT-----GAHIGCD-TSHCGACTVDLD-GM--------------------SVKSCTMFA 66 (166)
T ss_dssp EEEEECTTCBHH-HHHHHTSCCT-----TSCCCCS-SSCSCTTEEEET-TE--------------------EEEGGGSBG
T ss_pred EEEecCCCCcHH-HHHHHcCCCC-----ccccCCC-CCCCCCCEEEEC-Cc--------------------EEechhhhH
Confidence 467889999999 998885 432 2234797 899999999994 53 478888877
Q ss_pred eeccCCCc
Q 029865 155 GNKENSGK 162 (186)
Q Consensus 155 ~~~~~~gd 162 (186)
. +.+|.
T Consensus 67 ~--~~~G~ 72 (166)
T 1n62_A 67 V--QANGA 72 (166)
T ss_dssp G--GGTTC
T ss_pred H--HhCCc
Confidence 4 33454
No 36
>1ffv_A CUTS, iron-sulfur protein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: a.56.1.1 d.15.4.2 PDB: 1ffu_A*
Probab=96.71 E-value=0.003 Score=50.37 Aligned_cols=57 Identities=19% Similarity=0.506 Sum_probs=42.2
Q ss_pred EEEEecCCchHHHHHHHHC-CCCccccCCcccCCCCceeecCCEEEEecCcccCCCCChHHHhccCCCCCCeEEeeEeEe
Q 029865 76 ERAKAISGEKLLRNIMLDN-KIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154 (186)
Q Consensus 76 ~~v~v~~G~tLLr~al~~~-GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLACQ~~v 154 (186)
++++++++++|| ++|++. |+. +....|+ .|.||+|.|.|. |. .++||.+.+
T Consensus 15 ~~~~v~~~~tLL-d~LR~~lglt-----g~k~gC~-~G~CGaCtV~vd-G~--------------------~v~sC~~~~ 66 (163)
T 1ffv_A 15 QEKAVEPRTLLI-HFLREELNLT-----GAHIGCE-TSHCGACTVDID-GR--------------------SVKSCTHLA 66 (163)
T ss_dssp EEEEECTTCBHH-HHHHHTSCCT-----TSCCCCS-SSCSCTTEEEET-TE--------------------EEEGGGSBG
T ss_pred EEEecCCCCcHH-HHHHhcCCCc-----ccccCCC-CCCCCCCEEEEC-Cc--------------------EecchHhhH
Confidence 467889999999 998874 432 2335798 899999999984 53 478888877
Q ss_pred eeccCCCc
Q 029865 155 GNKENSGK 162 (186)
Q Consensus 155 ~~~~~~gd 162 (186)
. +.+|.
T Consensus 67 ~--~~~G~ 72 (163)
T 1ffv_A 67 V--QCDGS 72 (163)
T ss_dssp G--GGTTC
T ss_pred H--HhCCc
Confidence 5 34454
No 37
>1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1
Probab=95.84 E-value=0.0098 Score=58.33 Aligned_cols=52 Identities=27% Similarity=0.558 Sum_probs=40.4
Q ss_pred EEEecCCchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEecCcccCCCCChHHHhccCCCCCCeEEeeEeEee
Q 029865 77 RAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVG 155 (186)
Q Consensus 77 ~v~v~~G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLACQ~~v~ 155 (186)
++++.++++|| ++|++. +.+. +.+..|+ .|.||.|.|.|. |. .+++|.+.+.
T Consensus 14 ~~~~~~~~~ll-~~Lr~~-~~l~---g~k~gC~-~G~CGaCtv~vd-g~--------------------~v~sC~~~~~ 65 (907)
T 1dgj_A 14 RLLVSPNDLLV-DVLRSQ-LQLT---SVKVGCG-KGQCGACTVILD-GK--------------------VVRACIIKMS 65 (907)
T ss_dssp EEEECTTCBHH-HHHHHT-TCCT---TSCCSSS-SSSSCTTEEEET-TE--------------------EEEGGGCBGG
T ss_pred EEecCCCCcHH-HHHHHh-cCCC---ccCCCCC-CCCcCceEEEEC-Ce--------------------EeehhHhHHH
Confidence 67889999999 999885 2222 3456898 899999999994 54 5788888775
No 38
>1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A*
Probab=95.14 E-value=0.015 Score=57.13 Aligned_cols=53 Identities=28% Similarity=0.505 Sum_probs=40.8
Q ss_pred EEEEecCCchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEecCcccCCCCChHHHhccCCCCCCeEEeeEeEee
Q 029865 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVG 155 (186)
Q Consensus 76 ~~v~v~~G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLACQ~~v~ 155 (186)
+++++.++++|| ++|++. ..+ .+.+..|+ .|.||.|.|.| +|. .++||.+.+.
T Consensus 13 ~~~~~~~~~~ll-~~Lr~~-~~l---~g~k~gC~-~g~CGaCtv~v-dg~--------------------~~~sC~~~~~ 65 (907)
T 1vlb_A 13 QNLFVDAEALLS-DVLRQQ-LGL---TGVKVGCE-QGQCGACSVIL-DGK--------------------VVRACVTKMK 65 (907)
T ss_dssp EEEEECTTSBHH-HHHHHT-TCC---TTSCCSSS-SSSSCTTEEEE-TTE--------------------EEEGGGCBGG
T ss_pred EEEecCCCChHH-HHHHHh-cCC---CeecCCCC-CCCcCccEEEE-CCe--------------------EeechHhHHH
Confidence 467899999999 999885 222 23456798 89999999998 354 5789988775
No 39
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=93.94 E-value=0.041 Score=50.15 Aligned_cols=61 Identities=26% Similarity=0.466 Sum_probs=42.3
Q ss_pred EEE-EecCCchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEecCcccCCCCChHHHhccCCCCCCeEEeeEeEe
Q 029865 76 ERA-KAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154 (186)
Q Consensus 76 ~~v-~v~~G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLACQ~~v 154 (186)
+++ ++.++++|| ++|++.|+. +....|+ .|.||.|.|.|.+=.+ ...+++|.+.+
T Consensus 12 ~~~~~~~~~~~Ll-~~Lr~~~l~-----g~k~gC~-~G~CGaCtV~v~~~~~-----------------g~~v~sCl~~~ 67 (462)
T 2w3s_A 12 RRVRIEDPTQSLL-EWLRAEGLT-----GTKEGCN-EGDCGACTVMIRDAAG-----------------SRAVNACLMML 67 (462)
T ss_dssp EEEECSCTTCBHH-HHHHHTTCT-----TSCCSCS-SSSSCTTEEEEEETTE-----------------EEEEETTTCBG
T ss_pred EEEecCCCCCcHH-HHHHHcCCC-----ccCCCCC-CCCcCCcEEEEEecCC-----------------CeEEEchhhhH
Confidence 456 678999999 999855543 3456798 8999999999943110 02578888877
Q ss_pred eeccCCCc
Q 029865 155 GNKENSGK 162 (186)
Q Consensus 155 ~~~~~~gd 162 (186)
. +.+|.
T Consensus 68 ~--~~~g~ 73 (462)
T 2w3s_A 68 P--QIAGK 73 (462)
T ss_dssp G--GGTTC
T ss_pred H--HhCCC
Confidence 5 34453
No 40
>3nvw_A Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, guanine, oxidoredu; HET: FAD MTE GUN; 1.60A {Bos taurus} PDB: 3etr_A* 3ns1_A* 3nvv_A* 3nrz_A* 3nvy_A* 3nvz_A* 3rca_A* 3sr6_A* 3eub_A*
Probab=93.68 E-value=0.042 Score=43.93 Aligned_cols=39 Identities=28% Similarity=0.612 Sum_probs=30.6
Q ss_pred EEEecCCchHHHHHHHHC-CCCccccCCcccCCCCceeecCCEEEEe
Q 029865 77 RAKAISGEKLLRNIMLDN-KIELYATYGKVMNCGGGGSCGTCIVEII 122 (186)
Q Consensus 77 ~v~v~~G~tLLr~al~~~-GI~l~~~~~~~~~CgG~G~CGTC~V~V~ 122 (186)
.+++.++++|| ++|++. |+ . +....|+ .|.||.|.|.|.
T Consensus 16 ~~~~~p~~~Ll-~~LR~~lgl--t---GtK~GC~-~G~CGACTVlvd 55 (164)
T 3nvw_A 16 EKNADPETTLL-AYLRRKLGL--R---GTKLGCG-EGGCGACTVMLS 55 (164)
T ss_dssp ETTCCTTCBHH-HHHHHTSCC--T---TSCCSCS-SSSSCTTEEEEE
T ss_pred EecCCCCCCHH-HHHHHHcCC--C---CcCCCcC-CCCCCCCEEEEc
Confidence 45688999999 999875 43 2 2345797 999999999997
No 41
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=90.58 E-value=0.21 Score=44.59 Aligned_cols=55 Identities=22% Similarity=0.238 Sum_probs=35.7
Q ss_pred CCcEEEEEecCCCCCCCCcceEEEEecCCchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEe
Q 029865 55 KPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEII 122 (186)
Q Consensus 55 ~~~V~v~f~~~~~~~d~~~~v~~v~v~~G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~ 122 (186)
+..|+++|.+ ..+++.+|+||+ +|++++|+++-.. ...+.-.|.-.|+.|.|.|.
T Consensus 13 ~~~v~~~~dg-----------~~~~~~~g~ti~-~a~~~~g~~~~~~-~~~~~p~g~~~~~~c~v~v~ 67 (493)
T 1y56_A 13 GKKVTIYFEG-----------KELEAYEGEKLP-VALLANEIYWLTT-SNEGRKRGAFTFGPVPMTVN 67 (493)
T ss_dssp SCEEEEEETT-----------EEEEEETTCBHH-HHHHHTTCCCCEE-CTTSCEECSSSSSCCEEBSS
T ss_pred CCeEEEEECC-----------EEEEecCCCHHH-HHHHHCCCceecC-CCCCCCCccccceEEEEEEC
Confidence 3468888743 478889999999 9999999975321 11111112223678999875
No 42
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=86.25 E-value=0.65 Score=45.37 Aligned_cols=56 Identities=13% Similarity=0.217 Sum_probs=42.5
Q ss_pred CCCcEEEEEecCCCCCCCCcceEEEEecCCchHHHHHHHHCCCCcccc---CCc--ccCCCCceeecCCEEEEe
Q 029865 54 EKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYAT---YGK--VMNCGGGGSCGTCIVEII 122 (186)
Q Consensus 54 ~~~~V~v~f~~~~~~~d~~~~v~~v~v~~G~tLLr~al~~~GI~l~~~---~~~--~~~CgG~G~CGTC~V~V~ 122 (186)
.+..|+|+|.+ .++++.+|+||+ +||+.+|+.+... |+. ...|. .|.|..|.|.|.
T Consensus 19 ~~~~~~~~~dG-----------~~~~~~~g~tv~-~aL~~~Gv~~~~~s~~~~~prg~~~~-~~~c~~~~v~v~ 79 (965)
T 2gag_A 19 REEALSLTVDG-----------AKLSAFRGDTVA-SALLANGVRRAGNSLYLDRPRGIFAA-GVEEPNALVTVS 79 (965)
T ss_dssp EEEEEEEEETT-----------EEEEEEETCBHH-HHHHHTTCCBCSCCTTTCCCCBCCCS-STTCCSCEEEEC
T ss_pred CCCeEEEEECC-----------EEEEecCCCHHH-HHHHHcCCeEeecCCCCCCCcccccC-CccCCceEEEEc
Confidence 34567877644 477888999999 9999999985432 333 35787 688999999998
No 43
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=83.18 E-value=0.62 Score=37.89 Aligned_cols=31 Identities=29% Similarity=0.536 Sum_probs=26.1
Q ss_pred HHHCCCCccccCCcccCCCCceeecCCEEEEe
Q 029865 91 MLDNKIELYATYGKVMNCGGGGSCGTCIVEII 122 (186)
Q Consensus 91 l~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~ 122 (186)
+.+.|++....+...+.|| -|.|+.|.+.+.
T Consensus 209 l~~~gv~~~vs~e~~m~CG-~G~C~~C~~~~~ 239 (262)
T 1ep3_B 209 KYDQLERLYISMESRMACG-IGACYACVEHDK 239 (262)
T ss_dssp HTTTCSSEEEECCCCCSSS-SSSSCTTEEEET
T ss_pred HHhCCCCEEEEecccccCc-ccccccCCcccc
Confidence 6678888766778889997 999999999864
No 44
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=74.36 E-value=2 Score=43.92 Aligned_cols=38 Identities=29% Similarity=0.612 Sum_probs=29.2
Q ss_pred EecCCchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEe
Q 029865 79 KAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEII 122 (186)
Q Consensus 79 ~v~~G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~ 122 (186)
.+.++++|| +.|++. +.+.+ ....|+ .|.||.|.|.|.
T Consensus 19 ~~~p~~~ll-~~LR~~-~~ltg---tk~gC~-~g~CGaCtV~~~ 56 (1332)
T 3unc_A 19 NADPETTLL-AYLRRK-LGLRG---TKLGCG-EGGCGACTVMLS 56 (1332)
T ss_dssp TCCTTCBHH-HHHHHT-SCCTT---SCCSCS-SSSSCTTEEEEE
T ss_pred cCCCCCCHH-HHHhhh-cCCCC---cCCCcC-CCCCCCcEEEEe
Confidence 578999999 988874 23332 345697 999999999995
No 45
>3kwl_A Uncharacterized protein; putative oxidoreductase, multidomain, unknown function; 1.94A {Helicobacter pylori}
Probab=65.85 E-value=7.3 Score=35.57 Aligned_cols=56 Identities=9% Similarity=0.121 Sum_probs=38.4
Q ss_pred EEEEEecCCCCCCCCcceEEEEecCCchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEecCcccCC
Q 029865 58 IELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLN 129 (186)
Q Consensus 58 V~v~f~~~~~~~d~~~~v~~v~v~~G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~~G~~~l~ 129 (186)
++|..++++.+....|+..++++.+++|+| ++|..-. . +.|+ . +|.++| .|...|.
T Consensus 27 ~~i~R~~p~~~~~p~~~~y~v~~~~~~~vL-d~L~~ik-~--------l~fr-~----sCam~I-NG~~~la 82 (514)
T 3kwl_A 27 VKVFRFETNKDYNPAYESYFLEYQEDQYLL-DLLKQLK-G--------VSYS-E----NIALKI-NQIAVFE 82 (514)
T ss_dssp EEEEECBTTSCSCCEEEEEEEECCTTCBHH-HHHTTST-T--------CCCC-S----SCCEEE-TTEEECS
T ss_pred EEEEEeCCCCCCCCceEEEEEeCCCCCcHH-HHHHHhh-h--------Ceee-c----cceEEE-CCEehhh
Confidence 556666665433455777788999999999 9997766 2 2477 3 787877 4765443
No 46
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=56.30 E-value=7.3 Score=39.74 Aligned_cols=38 Identities=37% Similarity=0.628 Sum_probs=28.9
Q ss_pred EecCCchHHHHHHHHCCCCccccCCcccCCCCceeecCCEEEEe
Q 029865 79 KAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEII 122 (186)
Q Consensus 79 ~v~~G~tLLr~al~~~GI~l~~~~~~~~~CgG~G~CGTC~V~V~ 122 (186)
.+.+.+||| +-|+.+ ..+.+ ...-|+ .|-||.|.|-|-
T Consensus 23 ~~~p~~tLl-~~LR~~-~~ltG---TK~gC~-EG~CGACtV~v~ 60 (1335)
T 3zyv_A 23 NADPEVNLL-FYLRKV-IRLTG---TKYGCG-GGDCGACTVMIS 60 (1335)
T ss_dssp SCCTTCBHH-HHHHHT-TCCTT---SCCSCS-SSSSCTTEEEEE
T ss_pred CCCcCccHH-HHHhcc-CCCcc---cccccC-CCCCcceEEEEe
Confidence 467899999 877763 44443 345698 999999999985
No 47
>3u7z_A Putative metal binding protein rumgna_00854; the binding protein, transport protein, structural genomics, center for structural genomics; 1.30A {Ruminococcus gnavus}
Probab=54.39 E-value=19 Score=26.20 Aligned_cols=40 Identities=10% Similarity=0.044 Sum_probs=29.1
Q ss_pred CCCcEEEEEecCCCCCCCCcceEEEEecCCchHHHHHHHHCCCCccc
Q 029865 54 EKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYA 100 (186)
Q Consensus 54 ~~~~V~v~f~~~~~~~d~~~~v~~v~v~~G~tLLr~al~~~GI~l~~ 100 (186)
...+|+|++.++++ +-....++ +.|++|+ ++|.++. .+..
T Consensus 5 g~k~i~i~v~~~~~----~~~~~~v~-t~g~tL~-dvLk~~~-~ve~ 44 (101)
T 3u7z_A 5 GEKHITVTVIHGDQ----TENVFEFD-TDAKYLG-EVLESEN-LVDG 44 (101)
T ss_dssp CCEEEEEEEECTTS----CEEEEEEE-ECCSBHH-HHHHHTT-CEEE
T ss_pred ceeEEEEEEEcCCC----ceeEEEEc-CCccHHH-HHHHHcC-cccc
Confidence 45678888888643 23345778 9999999 9999988 3443
No 48
>2l32_A Small archaeal modifier protein 2; protein BIN; NMR {Haloferax volcanii}
Probab=29.32 E-value=50 Score=22.16 Aligned_cols=23 Identities=0% Similarity=-0.052 Sum_probs=19.9
Q ss_pred EEEEecCCchHHHHHHHHCCCCcc
Q 029865 76 ERAKAISGEKLLRNIMLDNKIELY 99 (186)
Q Consensus 76 ~~v~v~~G~tLLr~al~~~GI~l~ 99 (186)
.++++++|.|+. +++.+.|++..
T Consensus 13 ~~~ev~~g~Tv~-dLL~~Lgl~~~ 35 (74)
T 2l32_A 13 SEVAVDDDGTYA-DLVRAVDLSPH 35 (74)
T ss_dssp EEEECSTTCSHH-HHHHTTCCCSS
T ss_pred eeEEcCCCCcHH-HHHHHcCCCcc
Confidence 468899999987 99999998865
No 49
>3kdv_A DDRB, DNA damage response B protein; anti-parallel beta-barrel, pentamer, DNA binding protein; HET: DNA; 2.80A {Deinococcus geothermalis} PDB: 4exw_A
Probab=21.02 E-value=1e+02 Score=24.52 Aligned_cols=37 Identities=19% Similarity=0.198 Sum_probs=27.8
Q ss_pred CCCCcEEEEEecCCCCCCCCcceEEEEecCCchHHHHHHHHCCC
Q 029865 53 PEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKI 96 (186)
Q Consensus 53 ~~~~~V~v~f~~~~~~~d~~~~v~~v~v~~G~tLLr~al~~~GI 96 (186)
+|-..++|+|..+-+. ..++++..++.|| ++++..|-
T Consensus 3 ~~~tml~i~f~t~LG~------~V~vdve~~~~~l-~v~R~yG~ 39 (184)
T 3kdv_A 3 DPFTMLHIEFITDLGA------KVTVDVESADKLL-DVQRQYGR 39 (184)
T ss_dssp CCSCCEEEEEECTTCC------EEEEEESSGGGHH-HHHHHHHT
T ss_pred CccceEEEEEecCCCc------eEEEecCCHHHHH-HHHHHhhh
Confidence 3456788999886431 2588999999999 99987654
Done!