BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029867
(186 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9WTU0|PHF2_MOUSE Lysine-specific demethylase PHF2 OS=Mus musculus GN=Phf2 PE=1 SV=2
Length = 1096
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 107 VAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCS-----SDVD 161
V VYC C +PY+ M++C+ CKDWFH SC+G+ EEA +D + C +C S +
Sbjct: 4 VPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGKSTLK 63
Query: 162 AKRSLNTFSVSPSVEAK 178
KR+ + P+ + K
Sbjct: 64 KKRTWHKHGPGPTPDVK 80
>sp|O75151|PHF2_HUMAN Lysine-specific demethylase PHF2 OS=Homo sapiens GN=PHF2 PE=1 SV=4
Length = 1096
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 107 VAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDC 156
V VYC C +PY+ M++C+ CKDWFH SC+G+ EEA +D + C +C
Sbjct: 4 VPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNC 53
>sp|Q6P949|PHF2_DANRE Lysine-specific demethylase phf2 OS=Danio rerio GN=phf2 PE=2 SV=3
Length = 1063
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 107 VAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDC 156
V VYC C +PY+ M++C+ CKDWFH SC+G+ +EA +D + C +C
Sbjct: 4 VPVYCICRLPYDVTQFMIECDACKDWFHGSCVGVDEDEAPDIDIYHCPNC 53
>sp|E6ZGB4|PHF2_DICLA Lysine-specific demethylase phf2 OS=Dicentrarchus labrax GN=phf2
PE=3 SV=1
Length = 1081
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 107 VAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDC 156
V VYC C +PY+ M++C+ CKDWFH SC+G+ ++A +D + C +C
Sbjct: 4 VPVYCICRLPYDVTQFMIECDACKDWFHGSCVGVDEDDAPDIDIYHCPNC 53
>sp|Q9UPP1|PHF8_HUMAN Histone lysine demethylase PHF8 OS=Homo sapiens GN=PHF8 PE=1 SV=3
Length = 1060
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 107 VAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDC 156
V VYC C +PY+ M++C+ C+DWFH SC+G+ E+A +D + C +C
Sbjct: 40 VPVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNC 89
>sp|Q80TJ7|PHF8_MOUSE Histone lysine demethylase PHF8 OS=Mus musculus GN=Phf8 PE=1 SV=2
Length = 1023
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 107 VAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDC 156
V VYC C +PY+ M++C+ C+DWFH SC+G+ E+A +D + C +C
Sbjct: 4 VPVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNC 53
>sp|P0CH95|PHF8_DANRE Histone lysine demethylase PHF8 OS=Danio rerio GN=phf8 PE=1 SV=1
Length = 1032
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 107 VAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDC 156
V VYC C +PY+ M++C+ C+DWFH SC+G+ ++A ++D + C +C
Sbjct: 4 VPVYCLCRLPYDVTRFMIECDVCQDWFHGSCVGVEEDKAAEIDLYHCPNC 53
>sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF301 OS=Drosophila
melanogaster GN=E(bx) PE=1 SV=2
Length = 2669
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 109 VYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCSSDVDA 162
+YC C PY+ + C+ C+DWFH C+G+ EA+ +D ++C +C DA
Sbjct: 2496 LYCSCRQPYDESQFYICCDKCQDWFHGRCVGILQSEAEFIDEYVCPECQRKNDA 2549
Score = 57.4 bits (137), Expect = 6e-08, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 102 FTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDC 156
T + +YC C PY+ V C+ C +WFH C+ +T E +KKL F+C DC
Sbjct: 2433 LTRKKEKLYCICRTPYDDTKFYVGCDLCSNWFHGDCVSITEEASKKLSEFICIDC 2487
>sp|Q3UWM4|KDM7_MOUSE Lysine-specific demethylase 7 OS=Mus musculus GN=Jhdm1d PE=2 SV=2
Length = 940
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 109 VYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCSS 158
VYC C PY+ + M++C+ CKDWFH SC+G+ A +D + C DC++
Sbjct: 38 VYCVCRQPYDVNRFMIECDVCKDWFHGSCVGVEEHHAVDIDLYHCPDCAA 87
>sp|Q9P281|BAHC1_HUMAN BAH and coiled-coil domain-containing protein 1 OS=Homo sapiens
GN=BAHCC1 PE=1 SV=3
Length = 2608
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 10 PYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGK 69
PY+ R+E + +N+ V+V+W+Y PEE+ G+RQ G L+ S H D TI K
Sbjct: 2501 PYIGRIESMWESWGSNMVVKVKWFYHPEETKLGKRQCDGKNALYQSCHEDENDVQTISHK 2560
Query: 70 CTVHTFKNYTKL-ENVGAED----YFCRFEYKAATGGF-TPDRVAVYC 111
C V + Y ++ + +D Y+ Y TG T D V + C
Sbjct: 2561 CQVVAREQYEQMARSRKCQDRQDLYYLAGTYDPTTGRLVTADGVPILC 2608
>sp|Q3UHR0|BAHC1_MOUSE BAH and coiled-coil domain-containing protein 1 OS=Mus musculus
GN=Bahcc1 PE=2 SV=2
Length = 2643
Score = 56.6 bits (135), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 10 PYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGK 69
PY+ R+E + +N+ V+V+W+Y PEE+ G+RQ G L+ S H D TI K
Sbjct: 2536 PYIGRIESLWESWGSNMVVKVKWFYHPEETKLGKRQSDGKNALYQSCHEDENDVQTISHK 2595
Query: 70 CTVHTFKNYTKL----ENVGAED-YFCRFEYKAATGGF-TPDRVAVYC 111
C V + Y ++ + +D Y+ Y TG T D V V C
Sbjct: 2596 CQVVGREQYEQMMRGRKYQDQQDLYYLAGTYDPTTGRLVTADGVPVLC 2643
>sp|Q6ZMT4|KDM7_HUMAN Lysine-specific demethylase 7 OS=Homo sapiens GN=JHDM1D PE=1 SV=2
Length = 941
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 109 VYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCS 157
VYC C PY+ + M++C+ CKDWFH SC+G+ A +D + C +C+
Sbjct: 38 VYCVCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCA 86
>sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF
PE=1 SV=3
Length = 3046
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 97 AATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDC 156
+ T T +YC C+ PY+ + C+ C++W+H C+G+ EA+ +D ++C C
Sbjct: 2856 STTSKETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQC 2915
Query: 157 SSDVDAKRSLNTFSVSPSVEAKVEPKRR 184
S DA L +P E E +R
Sbjct: 2916 QSTEDAMTVL-----TPLTEKDYEGLKR 2938
>sp|Q6BER5|NU301_CAEEL Nucleosome-remodeling factor subunit NURF301-like OS=Caenorhabditis
elegans GN=nurf-1 PE=1 SV=2
Length = 2194
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 105 DRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCSSDVDAKR 164
D+ A+YC C+ PY+ V C+ C+ WFHP C+G T EA++ + C C+ + +
Sbjct: 1956 DQPALYCVCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPACTREAEGYE 2015
Query: 165 S 165
S
Sbjct: 2016 S 2016
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 100 GGFTPDRVAV---YCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDC 156
G TP + + +C C+ ++ L +QCE C W+H C+G+ + L+H+ C +C
Sbjct: 1888 GSATPHDINLSIEHCTCQKIFDASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEEC 1947
>sp|Q08D35|KDM7_XENTR Lysine-specific demethylase 7 OS=Xenopus tropicalis GN=jhdm1d PE=2
SV=1
Length = 922
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 109 VYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDC 156
VYC C PY+ M++C+ CKDWFH SC+ + +A +D + C +C
Sbjct: 7 VYCVCRQPYDVSRFMIECDICKDWFHSSCVKVEEHQAADIDLYHCPNC 54
>sp|Q90941|PB1_CHICK Protein polybromo-1 OS=Gallus gallus GN=PBRM1 PE=1 SV=1
Length = 1633
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 1 MRPADSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDV 60
+ PA+++ P++ +E++ D + W+YRP E+ + KE+F SD+Y+
Sbjct: 964 VEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNK 1023
Query: 61 QSAHTIEGKCTVHTFKNYTKL--ENVGAED-YFCRFEYKAATGGF 102
I GKC V K Y KL EN ED Y C Y A T F
Sbjct: 1024 VPVSKILGKCVVMFVKEYFKLCPENFRDEDVYVCESRYSAKTKSF 1068
>sp|Q3LHL9|WGE_DROME Protein winged eye OS=Drosophila melanogaster GN=wge PE=1 SV=1
Length = 1658
Score = 52.4 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 10 PYVARVEKIEADHRNNVKVRVRWYYRPEESIG-GRRQFHGAKELFLSDHYDVQSAHTIEG 68
PY+ R+E + N VRV W+Y PEE+ G + +F GA LF S H D TI
Sbjct: 1529 PYIGRIESMWETTTGNKVVRVAWFYHPEETTGCPKLKFPGA--LFESPHEDENDVQTISH 1586
Query: 69 KCTVHTFKNYTKLENVGAE 87
+C V F +Y E GA+
Sbjct: 1587 RCEVLQFGSY--FEKFGAD 1603
>sp|Q8BSQ9|PB1_MOUSE Protein polybromo-1 OS=Mus musculus GN=Pbrm1 PE=1 SV=4
Length = 1634
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 1 MRPADSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDV 60
+ PA+++ P++ +E++ D + W+YRP E+ + KE+F SD+Y+
Sbjct: 966 VEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNK 1025
Query: 61 QSAHTIEGKCTVHTFKNYTKL--ENVGAEDYF-CRFEYKAATGGF 102
I GKC V K Y KL EN ED F C Y A T F
Sbjct: 1026 VPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVCESRYSAKTKSF 1070
>sp|Q5RHD1|KDM7A_DANRE Lysine-specific demethylase 7A OS=Danio rerio GN=jhdm1da PE=2 SV=2
Length = 875
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 109 VYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDC 156
+YC C PY+ + M++C+ CKDWFH SC+ + A +D + C +C
Sbjct: 6 LYCVCRQPYDVNRFMIECDICKDWFHGSCVQVVEHHAADIDVYHCPNC 53
>sp|Q86U86|PB1_HUMAN Protein polybromo-1 OS=Homo sapiens GN=PBRM1 PE=1 SV=1
Length = 1689
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 1 MRPADSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDV 60
+ PA+++ P++ +E++ D + W+YRP E+ + KE+F SD+Y+
Sbjct: 966 VEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNK 1025
Query: 61 QSAHTIEGKCTVHTFKNYTKL--ENVGAEDYF-CRFEYKAATGGF 102
I GKC V K Y KL EN ED F C Y A T F
Sbjct: 1026 VPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVCESRYSAKTKSF 1070
>sp|Q9UT79|MSC1_SCHPO Multicopy suppressor of chk1 protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=msc1 PE=4 SV=1
Length = 1588
Score = 50.8 bits (120), Expect = 5e-06, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 108 AVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCSS 158
+V C C P+ D VQC C +WFH C+G++ + L ++ C DC S
Sbjct: 1454 SVICLCRQPFAISDGTVQCHNCLEWFHYECVGLSSDIVSTLSNYACPDCCS 1504
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 110 YCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCSSDVDAKR 164
YC C P +M++CE C +W+H CM M+ ++ + + F+C C V+ R
Sbjct: 1173 YCFCRQP--EAGMMIECELCHEWYHAKCMKMSKKKLRADEKFICPICDYRVEVPR 1225
>sp|P0CF52|KDM7B_DANRE Lysine-specific demethylase 7B OS=Danio rerio GN=jhdm1db PE=2 SV=1
Length = 577
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 109 VYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDC 156
+YC C PY+ M++C+ CKDWFH SC+ + A +D + C +C
Sbjct: 6 LYCVCRQPYDVSRFMIECDICKDWFHGSCVEVEEHYAVDIDVYHCPNC 53
>sp|Q8TBE0|BAHD1_HUMAN Bromo adjacent homology domain-containing 1 protein OS=Homo sapiens
GN=BAHD1 PE=1 SV=2
Length = 780
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 10 PYVARVEKI-EADHRNNVKVRVRWYYRPEESIGGRR-QFHGA--KELFLSDHYDVQSAHT 65
PYVA++ + E + + + WYYRPE GGR H E+F S H D S
Sbjct: 644 PYVAKISALWENPESGELMMSLLWYYRPEHLQGGRSPSMHEPLQNEVFASRHQDQNSVAC 703
Query: 66 IEGKCTVHTFKNY 78
IE KC V TF Y
Sbjct: 704 IEEKCYVLTFAEY 716
>sp|O15417|TNC18_HUMAN Trinucleotide repeat-containing gene 18 protein OS=Homo sapiens
GN=TNRC18 PE=1 SV=3
Length = 2968
Score = 47.4 bits (111), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 33/134 (24%)
Query: 10 PYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGA-------------------- 49
PY+ R++ + NN+ VRV+W+Y PEE+ G +QFH
Sbjct: 2836 PYIGRIQSMWESWGNNMVVRVKWFYHPEETSPG-KQFHQGQHWDQKSSRSLPAALRVSSQ 2894
Query: 50 ------KELFLSDHYDVQSAHTIEGKCTVHTFKNYTK-LENVGAED----YFCRFEYKAA 98
+ L+ S H D T+ KC V + Y + L+ +D Y+ Y+
Sbjct: 2895 RKDFMERALYQSSHVDENDVQTVSHKCLVVGLEQYEQMLKTKKYQDSEGLYYLAGTYEPT 2954
Query: 99 TGG-FTPDRVAVYC 111
TG F+ D V V C
Sbjct: 2955 TGMIFSTDGVPVLC 2968
>sp|Q80WC3|TNC18_MOUSE Trinucleotide repeat-containing gene 18 protein OS=Mus musculus
GN=Tnrc18 PE=1 SV=2
Length = 2878
Score = 47.0 bits (110), Expect = 7e-05, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 33/134 (24%)
Query: 10 PYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGA-------------------- 49
PY+ R++ + NN+ VRV+W+Y PEE+ G +QFH
Sbjct: 2746 PYIGRIQSMWESWGNNMVVRVKWFYHPEETSPG-KQFHEGQHWDQKSGHSLPAALRASSQ 2804
Query: 50 ------KELFLSDHYDVQSAHTIEGKCTVHTFKNYTK-LENVGAED----YFCRFEYKAA 98
+ L+ S H D T+ KC V + Y + L+ +D Y+ Y+
Sbjct: 2805 RKDFMERALYQSSHVDENDVQTVSHKCLVVGLEQYEQMLKTKKYQDSEGLYYLAGTYEPT 2864
Query: 99 TGG-FTPDRVAVYC 111
TG F+ D V V C
Sbjct: 2865 TGMIFSTDGVPVLC 2878
>sp|Q84TV4|ALFL3_ORYSJ PHD finger protein ALFIN-LIKE 3 OS=Oryza sativa subsp. japonica
GN=Os03g0818300 PE=2 SV=1
Length = 247
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 113 CEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCSSDVDAKRSL 166
C YN ++ + C+ C+ WFH C+ +T +A+ + H+ C DCSS K L
Sbjct: 194 CGGLYNANEFWIGCDICERWFHGKCVRITPAKAEHIKHYKCPDCSSSSSKKTRL 247
>sp|B8AMA8|ALFL3_ORYSI PHD finger protein ALFIN-LIKE 3 OS=Oryza sativa subsp. indica
GN=OsI_14081 PE=3 SV=2
Length = 247
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 113 CEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCSSDVDAKRSL 166
C YN ++ + C+ C+ WFH C+ +T +A+ + H+ C DCSS K L
Sbjct: 194 CGGLYNANEFWIGCDICERWFHGKCVRITPAKAEHIKHYKCPDCSSSSSKKTRL 247
>sp|Q09329|MLO2_SCHPO Protein mlo2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mlo2 PE=2 SV=1
Length = 329
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 8/56 (14%)
Query: 110 YCKCEMPYNPDD---LMVQCEGCKDWFHPSCM-----GMTIEEAKKLDHFLCSDCS 157
+C C+ YNP+ M QC C+DWFH C+ G+ I +A+ + +CS+CS
Sbjct: 122 FCICDTVYNPETEEGTMFQCILCEDWFHEKCLQKTNKGIAIPDAETFEWLVCSECS 177
>sp|Q497V6|BAHD1_MOUSE Bromo adjacent homology domain-containing 1 protein OS=Mus musculus
GN=Bahd1 PE=2 SV=1
Length = 772
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 10 PYVARVEKI-EADHRNNVKVRVRWYYRPEESIGGRR-QFHGA--KELFLSDHYDVQSAHT 65
PYVA++ + E + + + WYYRPE GGR H E+F S H D S
Sbjct: 636 PYVAKISALWENPESGELMMSLLWYYRPEHLQGGRSPSMHEPLQNEVFASRHQDQNSVAC 695
Query: 66 IEGKCTVHTFKNYTKL 81
IE KC V TF Y +
Sbjct: 696 IEEKCYVLTFAEYCRF 711
>sp|Q23541|KDM5_CAEEL Lysine-specific demethylase rbr-2 OS=Caenorhabditis elegans GN=rbr-2
PE=1 SV=2
Length = 1477
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 113 CEMPYNPDDLMVQCE-GCKDWFHPSCMGMTIEEAKKLDHFLCSDCSSDVDAKRS 165
C PY V CE GCK+WFH C+G T+ E + + CS C D+ S
Sbjct: 1419 CLKPYGDSVNWVMCEAGCKNWFHVICLGFTLREINDMHEYRCSSCLDHADSPTS 1472
>sp|Q9HDV4|LID2_SCHPO Lid2 complex component lid2 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=lid2 PE=1 SV=1
Length = 1513
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 109 VYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCSSDVDAKRSLN 167
++C C +P +M++CE C +W+H C+ M+ ++ ++ + F C C V+ R N
Sbjct: 1097 IFCFCRLP--ESGVMIECEICHEWYHAKCLKMSKKKLRQDEKFTCPICDYRVEIPRLSN 1153
Score = 36.6 bits (83), Expect = 0.085, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 111 CKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDC 156
C C ++P D + C C+ FH C+G+ E A + F C C
Sbjct: 1355 CLCGEEFSPRDSFIDCTICERRFHYDCVGLNNEIADSVSKFTCPIC 1400
Score = 30.8 bits (68), Expect = 5.0, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 113 CEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCS---SDVDAKRSL 166
C + NP+ +++ C+GC+ +H SC+ + K D + C C SD D ++
Sbjct: 274 CGLDKNPETILL-CDGCEAAYHTSCLDPPLTSIPKEDWY-CDACKFNISDYDPRKGF 328
>sp|Q9BTC0|DIDO1_HUMAN Death-inducer obliterator 1 OS=Homo sapiens GN=DIDO1 PE=1 SV=5
Length = 2240
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 37/61 (60%), Gaps = 7/61 (11%)
Query: 101 GFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDH----FLCSDC 156
G+ P+ A+YC C P+N + M+ C+ C++WFH C+G++ + L+ ++C +C
Sbjct: 263 GYDPN--ALYCICRQPHN-NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNC 319
Query: 157 S 157
+
Sbjct: 320 T 320
>sp|Q54DV0|UBR7_DICDI Putative E3 ubiquitin-protein ligase ubr7 OS=Dictyostelium
discoideum GN=ubr7 PE=3 SV=2
Length = 465
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 110 YCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMT-----IEEAKKLDHFLCSDCSS 158
YC C+ PY+ + M+QC C+DWFH +C+ + I + +C+DC S
Sbjct: 239 YCYCDSPYDYKEDMIQCIFCEDWFHENCLKLNSNVTDIPSPGEFSDLICADCLS 292
>sp|Q9W352|Y7446_DROME PHD finger and CXXC domain-containing protein CG17446 OS=Drosophila
melanogaster GN=CG17446 PE=1 SV=1
Length = 663
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 94 EYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLC 153
E K+ YC C + M+ C+GC++W+H C+G+T +EAK + + C
Sbjct: 46 ERKSKIATILKQEDQAYCICR-SSDCSRFMIGCDGCEEWYHGDCIGITEKEAKHIKQYYC 104
Query: 154 SDCSSD 159
C +
Sbjct: 105 RRCKKE 110
>sp|Q8H383|ALFL2_ORYSJ PHD finger protein ALFIN-LIKE 2 OS=Oryza sativa subsp. japonica
GN=Os07g0233300 PE=2 SV=1
Length = 244
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 113 CEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCSS 158
C YN ++ + C+ C+ WFH C+ +T +A+ + H+ C DCSS
Sbjct: 193 CGGRYNANEFWIGCDICERWFHGKCVRITPAKAEHIKHYKCPDCSS 238
>sp|B8B8I3|ALFL2_ORYSI PHD finger protein ALFIN-LIKE 2 OS=Oryza sativa subsp. indica
GN=OsI_25444 PE=3 SV=1
Length = 244
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 113 CEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCSS 158
C YN ++ + C+ C+ WFH C+ +T +A+ + H+ C DCSS
Sbjct: 193 CGGRYNANEFWIGCDICERWFHGKCVRITPAKAEHIKHYKCPDCSS 238
>sp|Q9TSV4|TCF19_PIG Transcription factor 19 OS=Sus scrofa GN=TCF19 PE=3 SV=1
Length = 346
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 98 ATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCS 157
A GG P A C C +P VQC+GC WFH +C+G +I+ AK+ D F C C
Sbjct: 286 AAGGGEP--CAAPCCC-LPQEETVAWVQCDGCDTWFHVACVGCSIQAAKEAD-FRCPGCR 341
Query: 158 SDVDA 162
+ +
Sbjct: 342 VGIQS 346
>sp|Q8C9B9|DIDO1_MOUSE Death-inducer obliterator 1 OS=Mus musculus GN=Dido1 PE=1 SV=4
Length = 2256
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 105 DRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDH----FLCSDCS 157
D A+YC C P+N + M+ C+ C++WFH C+G++ + L+ ++C +C+
Sbjct: 262 DPNALYCICRQPHN-NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCT 317
>sp|P53236|RSC1_YEAST Chromatin structure-remodeling complex subunit RSC1
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=RSC1 PE=1 SV=1
Length = 928
Score = 43.5 bits (101), Expect = 8e-04, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 57/137 (41%), Gaps = 4/137 (2%)
Query: 3 PADSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQS 62
P D +KP V ++ ++ + N + WY+RPE+++ + E+ + Y
Sbjct: 381 PNDINKP-IVGQIFRLWSTTDGNKWLNACWYFRPEQTVHRVDRLFYKNEVMKTGQYRDHP 439
Query: 63 AHTIEGKCTVHTFKNYTKLE---NVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP 119
I+GKC V F + + + V + C F Y + F R C E +
Sbjct: 440 IQDIKGKCYVIHFTRFQRGDPSTKVNGPQFVCEFRYNESDKVFNKIRTWKACLPEELRDQ 499
Query: 120 DDLMVQCEGCKDWFHPS 136
D+ + G K + +PS
Sbjct: 500 DEPTIPVNGRKFFKYPS 516
>sp|Q7YR48|TCF19_PANTR Transcription factor 19 OS=Pan troglodytes GN=TCF19 PE=3 SV=1
Length = 345
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 98 ATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCS 157
A GG P A C C +P VQC+GC WFH +C+G +I+ A++ D F C C
Sbjct: 285 AVGGGEP--CAAPCCC-LPQEETVAWVQCDGCDVWFHVACVGCSIQAAREAD-FRCPGCR 340
Query: 158 SDVD 161
+ +
Sbjct: 341 AGIQ 344
>sp|Q2R837|ALFL8_ORYSJ PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. japonica
GN=Os11g0244800 PE=2 SV=1
Length = 254
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 113 CEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCSSDVDAKRS 165
C Y D+ + C+ C+ WFH C+ +T +A+ + H+ C +CSS R+
Sbjct: 202 CGDNYGQDEFWICCDACETWFHGKCVKITPAKAEHIKHYKCPNCSSSSKRARA 254
>sp|B8BJV8|ALFL8_ORYSI PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. indica
GN=OsI_35671 PE=3 SV=1
Length = 254
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 113 CEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCSSDVDAKRS 165
C Y D+ + C+ C+ WFH C+ +T +A+ + H+ C +CSS R+
Sbjct: 202 CGDNYGQDEFWICCDACETWFHGKCVKITPAKAEHIKHYKCPNCSSSSKRARA 254
>sp|Q9Y242|TCF19_HUMAN Transcription factor 19 OS=Homo sapiens GN=TCF19 PE=1 SV=2
Length = 345
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 98 ATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCS 157
A GG P A C C +P VQC+GC WFH +C+G +I+ A++ D F C C
Sbjct: 285 AVGGGEP--CAAPCCC-LPQEETVAWVQCDGCDVWFHVACVGCSIQAAREAD-FRCPGCR 340
Query: 158 SDVD 161
+ +
Sbjct: 341 AGIQ 344
>sp|Q5TM48|TCF19_MACMU Transcription factor 19 OS=Macaca mulatta GN=TCF19 PE=3 SV=1
Length = 345
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 98 ATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCS 157
A GG P A C C +P VQC+GC WFH +C+G +I+ A++ D F C C
Sbjct: 285 AVGGGEP--CAAPCCC-LPQEETVAWVQCDGCDVWFHVACVGCSIQAAREAD-FRCPGCR 340
Query: 158 SDV 160
+ +
Sbjct: 341 AGI 343
>sp|Q92576|PHF3_HUMAN PHD finger protein 3 OS=Homo sapiens GN=PHF3 PE=1 SV=3
Length = 2039
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 88 DYFCRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKK 147
D+ FE K +TP + +CK P+ + MV C C DWFH C+G+++ +A++
Sbjct: 703 DHSSSFESKYM---WTPSKQCGFCK--KPHG-NRFMVGCGRCDDWFHGDCVGLSLSQAQQ 756
Query: 148 L----DHFLCSDCSSDVDAKRSL 166
+ ++C C ++ D K +
Sbjct: 757 MGEEDKEYVCVKCCAEEDKKTEI 779
>sp|Q03012|SPP1_YEAST COMPASS component SPP1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SPP1 PE=1 SV=1
Length = 353
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 109 VYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCSSDVDAK 163
VYC C+ P + +LMV C+GC DWFH +C+ + + + F C C + + K
Sbjct: 23 VYCICKRP-DYGELMVGCDGCDDWFHFTCLHIPEQFKDLVFSFYCPYCQAGITGK 76
>sp|Q24459|PCL_DROME Polycomb protein Pcl OS=Drosophila melanogaster GN=Pcl PE=1 SV=2
Length = 1043
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 109 VYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFL---CSDCSSDVDAKRS 165
+YC C P D M+QC C++WFH CM ++ + D F C+ C++ ++ R
Sbjct: 513 IYCYCGKPGKFDHNMLQCCKCRNWFHTQCMQNFKKKLLRGDMFFVFCCTVCNNGIEFVRR 572
Query: 166 L 166
+
Sbjct: 573 M 573
>sp|Q61T02|KDM5_CAEBR Lysine-specific demethylase rbr-2 OS=Caenorhabditis briggsae GN=rbr-2
PE=3 SV=2
Length = 1482
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 113 CEMPYNPDDLMVQCE-GCKDWFHPSCMGMTIEEAKKLDHFLCSDCSSDVDAKRS 165
C P+ V C+ GCK+WFH C+G T+ E + + CS C D+ S
Sbjct: 1424 CLKPFGDSVNWVMCDAGCKNWFHVICVGFTLREINDMHEYRCSSCLDHADSPAS 1477
>sp|Q8S8M9|ALFL6_ARATH PHD finger protein ALFIN-LIKE 6 OS=Arabidopsis thaliana GN=AL6 PE=2
SV=1
Length = 256
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 108 AVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCSS 158
AV C Y D+ + C+ C+ WFH C+ +T +A+ + H+ C CS+
Sbjct: 201 AVCGACGDNYGTDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCPTCSN 251
>sp|Q99MY8|ASH1L_MOUSE Histone-lysine N-methyltransferase ASH1L OS=Mus musculus GN=Ash1l
PE=1 SV=3
Length = 2958
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 101 GFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDC 156
G D + C C + Y + LM+QC+ C W H CMG+ + ++H+LC C
Sbjct: 2567 GHEKDDDVIRCICGL-YKDEGLMIQCDKCMVWQHCDCMGVNTD----VEHYLCEQC 2617
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,074,360
Number of Sequences: 539616
Number of extensions: 3022477
Number of successful extensions: 5958
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 5760
Number of HSP's gapped (non-prelim): 266
length of query: 186
length of database: 191,569,459
effective HSP length: 111
effective length of query: 75
effective length of database: 131,672,083
effective search space: 9875406225
effective search space used: 9875406225
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)