Your job contains 1 sequence.
>029868
MLFLLLKHQLVATGLSGGFVLVTKMGFSCHTQPQTKRIEERLSALGNCIACNDHVALAHT
DLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQV
PLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPNAIVDEMRKS
LIDSYV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029868
(186 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2078921 - symbol:eIF6A "AT3G55620" species:370... 705 1.4e-69 1
UNIPROTKB|Q9TU47 - symbol:EIF6 "Eukaryotic translation in... 600 1.9e-58 1
UNIPROTKB|P56537 - symbol:EIF6 "Eukaryotic translation in... 600 1.9e-58 1
UNIPROTKB|I3L8I5 - symbol:EIF6 "Uncharacterized protein" ... 600 1.9e-58 1
MGI|MGI:1196288 - symbol:Eif6 "eukaryotic translation ini... 596 5.1e-58 1
RGD|1305373 - symbol:Eif6 "eukaryotic translation initiat... 596 5.1e-58 1
UNIPROTKB|F1NGL6 - symbol:EIF6 "Eukaryotic translation in... 595 6.6e-58 1
ZFIN|ZDB-GENE-031118-110 - symbol:eif6 "eukaryotic transl... 590 2.2e-57 1
UNIPROTKB|E2R1S5 - symbol:EIF6 "Eukaryotic translation in... 586 5.9e-57 1
CGD|CAL0001603 - symbol:orf19.1815 species:5476 "Candida ... 578 4.2e-56 1
POMBASE|SPCC1919.09 - symbol:tif6 "translation initiation... 572 1.8e-55 1
SGD|S000006220 - symbol:TIF6 "Constituent of 66S pre-ribo... 566 7.8e-55 1
TAIR|locus:2063927 - symbol:eIF6B "AT2G39820" species:370... 562 2.1e-54 1
DICTYBASE|DDB_G0276493 - symbol:eIF6 "eukaryotic translat... 551 3.0e-53 1
FB|FBgn0034915 - symbol:eIF6 "eIF6" species:7227 "Drosoph... 547 8.0e-53 1
UNIPROTKB|G4MUS0 - symbol:TIF6 "Eukaryotic translation in... 540 4.4e-52 1
ASPGD|ASPL0000076897 - symbol:AN8824 species:162425 "Emer... 534 1.9e-51 1
UNIPROTKB|B7ZBG9 - symbol:EIF6 "Eukaryotic translation in... 482 6.2e-46 1
WB|WBGene00001234 - symbol:eif-6 species:6239 "Caenorhabd... 451 1.2e-42 1
>TAIR|locus:2078921 [details] [associations]
symbol:eIF6A "AT3G55620" species:3702 "Arabidopsis
thaliana" [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0006413 "translational initiation" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=IMP;NAS] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0071215
"cellular response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR002769 Pfam:PF01912 PIRSF:PIRSF006413 SMART:SM00654
HAMAP:MF_00032 GO:GO:0005829 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0009793 GO:GO:0043022
GO:GO:0003743 GO:GO:0071215 GO:GO:0042256 EMBL:AL161667
eggNOG:COG1976 HOGENOM:HOG000230605 KO:K03264
ProtClustDB:CLSN2683375 PANTHER:PTHR10784 TIGRFAMs:TIGR00323
EMBL:AY128351 EMBL:BT009656 IPI:IPI00521801 PIR:T47701
RefSeq:NP_191121.1 UniGene:At.23205 HSSP:Q12522
ProteinModelPortal:Q9M060 SMR:Q9M060 STRING:Q9M060 PaxDb:Q9M060
PRIDE:Q9M060 EnsemblPlants:AT3G55620.1 GeneID:824728
KEGG:ath:AT3G55620 TAIR:At3g55620 InParanoid:Q9M060 OMA:QFENSNE
PhylomeDB:Q9M060 Genevestigator:Q9M060 Uniprot:Q9M060
Length = 245
Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
Identities = 134/155 (86%), Positives = 150/155 (96%)
Query: 32 QPQTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGS 91
Q +RI+ERLSALGNCIACND+VALAHTDLD+ETEEIIADVLGVEVFRQTIAGNILVGS
Sbjct: 91 QVVVQRIDERLSALGNCIACNDYVALAHTDLDKETEEIIADVLGVEVFRQTIAGNILVGS 150
Query: 92 YCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDT 151
YC+ SN+GG+VHPHTS+EDL+ELSTLLQVPLVAGTVNRGSEVI AG+TVNDWT+FCGSDT
Sbjct: 151 YCALSNKGGMVHPHTSVEDLEELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTSFCGSDT 210
Query: 152 TATELSVIESVFKLREAQPNAIVDEMRKSLIDSYV 186
TATELSVI+S+FKLREAQP++IVDEMRKSLID+YV
Sbjct: 211 TATELSVIDSIFKLREAQPSSIVDEMRKSLIDTYV 245
>UNIPROTKB|Q9TU47 [details] [associations]
symbol:EIF6 "Eukaryotic translation initiation factor 6"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005638 "lamin filament"
evidence=IEA] [GO:0043023 "ribosomal large subunit binding"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0042256 "mature ribosome assembly" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0000054 "ribosomal subunit export from nucleus" evidence=IEA]
[GO:0043022 "ribosome binding" evidence=IEA] InterPro:IPR002769
Pfam:PF01912 PIRSF:PIRSF006413 SMART:SM00654 HAMAP:MF_00032
GO:GO:0005737 GO:GO:0005730 GO:GO:0043022 GO:GO:0003743
GO:GO:0042256 eggNOG:COG1976 HOGENOM:HOG000230605 KO:K03264
PANTHER:PTHR10784 TIGRFAMs:TIGR00323 HSSP:Q12522 OMA:QFENSNE
EMBL:AF141872 EMBL:BC109922 IPI:IPI00699022 PIR:JC7273
RefSeq:NP_777255.1 UniGene:Bt.4426 ProteinModelPortal:Q9TU47
SMR:Q9TU47 STRING:Q9TU47 PRIDE:Q9TU47 Ensembl:ENSBTAT00000014966
GeneID:286811 KEGG:bta:286811 CTD:3692 GeneTree:ENSGT00390000015972
HOVERGEN:HBG001300 InParanoid:Q9TU47 OrthoDB:EOG4STS5C
NextBio:20806465 GO:GO:0005638 Uniprot:Q9TU47
Length = 245
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 117/151 (77%), Positives = 129/151 (85%)
Query: 34 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYC 93
Q +R+EERLSALGN CND+VAL H DLDRETEEI+ADVL VEVFRQT+A +LVGSYC
Sbjct: 93 QIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYC 152
Query: 94 SFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTA 153
FSN+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVI AG+ VNDW AFCG DTT+
Sbjct: 153 VFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTS 212
Query: 154 TELSVIESVFKLREAQPNAIVDEMRKSLIDS 184
TELSV+ESVFKL EAQP+ I MR SLIDS
Sbjct: 213 TELSVVESVFKLNEAQPSTIATSMRDSLIDS 243
>UNIPROTKB|P56537 [details] [associations]
symbol:EIF6 "Eukaryotic translation initiation factor 6"
species:9606 "Homo sapiens" [GO:0000054 "ribosomal subunit export
from nucleus" evidence=IEA] [GO:0003743 "translation initiation
factor activity" evidence=IEA] [GO:0042273 "ribosomal large subunit
biogenesis" evidence=IEA] [GO:0043023 "ribosomal large subunit
binding" evidence=IEA] [GO:0005638 "lamin filament" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0043022 "ribosome
binding" evidence=IDA] [GO:0042256 "mature ribosome assembly"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR002769 Pfam:PF01912 PIRSF:PIRSF006413
SMART:SM00654 HAMAP:MF_00032 GO:GO:0005634 GO:GO:0005737
EMBL:CH471077 GO:GO:0043022 GO:GO:0003743 GO:GO:0042256
CleanEx:HS_EIF3A eggNOG:COG1976 HOGENOM:HOG000230605 KO:K03264
PANTHER:PTHR10784 TIGRFAMs:TIGR00323 OMA:QFENSNE CTD:3692
HOVERGEN:HBG001300 OrthoDB:EOG4STS5C GO:GO:0005638 EMBL:AF022229
EMBL:Y11435 EMBL:AF289541 EMBL:AF289540 EMBL:AF047433 EMBL:AK314969
EMBL:AB062289 EMBL:CR456764 EMBL:AL121753 EMBL:BC001119
EMBL:BC011845 EMBL:BC019305 IPI:IPI00010105 RefSeq:NP_001254739.1
RefSeq:NP_002203.1 RefSeq:NP_852131.1 RefSeq:NP_852133.1
UniGene:Hs.654848 ProteinModelPortal:P56537 SMR:P56537
IntAct:P56537 STRING:P56537 Allergome:8361 PhosphoSite:P56537
DMDM:3122258 OGP:P56537 REPRODUCTION-2DPAGE:IPI00010105
SWISS-2DPAGE:P56537 PaxDb:P56537 PeptideAtlas:P56537 PRIDE:P56537
DNASU:3692 Ensembl:ENST00000374436 Ensembl:ENST00000374450
GeneID:3692 KEGG:hsa:3692 UCSC:uc002xbv.1 GeneCards:GC20M033870
HGNC:HGNC:6159 HPA:HPA040873 MIM:602912 neXtProt:NX_P56537
PharmGKB:PA29958 InParanoid:P56537 PhylomeDB:P56537 ChiTaRS:EIF6
GenomeRNAi:3692 NextBio:14465 ArrayExpress:P56537 Bgee:P56537
CleanEx:HS_EIF6 Genevestigator:P56537 GermOnline:ENSG00000126005
Uniprot:P56537
Length = 245
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 117/151 (77%), Positives = 129/151 (85%)
Query: 34 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYC 93
Q +R+EERLSALGN CND+VAL H DLDRETEEI+ADVL VEVFRQT+A +LVGSYC
Sbjct: 93 QIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYC 152
Query: 94 SFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTA 153
FSN+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVI AG+ VNDW AFCG DTT+
Sbjct: 153 VFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTS 212
Query: 154 TELSVIESVFKLREAQPNAIVDEMRKSLIDS 184
TELSV+ESVFKL EAQP+ I MR SLIDS
Sbjct: 213 TELSVVESVFKLNEAQPSTIATSMRDSLIDS 243
>UNIPROTKB|I3L8I5 [details] [associations]
symbol:EIF6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005638 "lamin filament" evidence=IEA] [GO:0043022
"ribosome binding" evidence=IEA] [GO:0042256 "mature ribosome
assembly" evidence=IEA] InterPro:IPR002769 Pfam:PF01912
PIRSF:PIRSF006413 SMART:SM00654 HAMAP:MF_00032 GO:GO:0043022
GO:GO:0042256 PANTHER:PTHR10784 TIGRFAMs:TIGR00323 OMA:QFENSNE
GeneTree:ENSGT00390000015972 GO:GO:0005638
Ensembl:ENSSSCT00000023513 Uniprot:I3L8I5
Length = 211
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 117/151 (77%), Positives = 129/151 (85%)
Query: 34 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYC 93
Q +R+EERLSALGN CND+VAL H DLDRETEEI+ADVL VEVFRQT+A +LVGSYC
Sbjct: 59 QIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLRVEVFRQTVADQVLVGSYC 118
Query: 94 SFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTA 153
FSN+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVI AG+ VNDW AFCG DTT+
Sbjct: 119 VFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTS 178
Query: 154 TELSVIESVFKLREAQPNAIVDEMRKSLIDS 184
TELSV+ESVFKL EAQP+ I MR SLIDS
Sbjct: 179 TELSVVESVFKLNEAQPSTIATSMRDSLIDS 209
>MGI|MGI:1196288 [details] [associations]
symbol:Eif6 "eukaryotic translation initiation factor 6"
species:10090 "Mus musculus" [GO:0003743 "translation initiation
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005638 "lamin filament" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005882 "intermediate filament" evidence=IDA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0007229 "integrin-mediated signaling
pathway" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0042256 "mature ribosome assembly" evidence=ISO]
[GO:0043022 "ribosome binding" evidence=ISO] InterPro:IPR002769
Pfam:PF01912 PIRSF:PIRSF006413 SMART:SM00654 HAMAP:MF_00032
MGI:MGI:1196288 GO:GO:0005737 GO:GO:0005730 GO:GO:0043022
GO:GO:0003743 GO:GO:0042256 eggNOG:COG1976 HOGENOM:HOG000230605
KO:K03264 PANTHER:PTHR10784 TIGRFAMs:TIGR00323 OMA:QFENSNE CTD:3692
HOVERGEN:HBG001300 OrthoDB:EOG4STS5C GO:GO:0005638 EMBL:AF047046
EMBL:BC015274 EMBL:BC024442 EMBL:Y11460 IPI:IPI00115862
RefSeq:NP_034709.1 UniGene:Mm.271674 ProteinModelPortal:O55135
SMR:O55135 IntAct:O55135 STRING:O55135 PhosphoSite:O55135
PaxDb:O55135 PRIDE:O55135 Ensembl:ENSMUST00000029142 GeneID:16418
KEGG:mmu:16418 InParanoid:O55135 NextBio:289617 Bgee:O55135
CleanEx:MM_EIF6 Genevestigator:O55135 GermOnline:ENSMUSG00000027613
Uniprot:O55135
Length = 245
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 116/151 (76%), Positives = 129/151 (85%)
Query: 34 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYC 93
Q +R+EERLSALGN CND+VAL H DLDRETEEI+ADVL VEVFRQT+A +LVGSYC
Sbjct: 93 QIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYC 152
Query: 94 SFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTA 153
FSN+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVI AG+ VNDW AFCG DTT+
Sbjct: 153 VFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTS 212
Query: 154 TELSVIESVFKLREAQPNAIVDEMRKSLIDS 184
TELSV+ESVFKL EA+P+ I MR SLIDS
Sbjct: 213 TELSVVESVFKLNEAKPSTIATSMRDSLIDS 243
>RGD|1305373 [details] [associations]
symbol:Eif6 "eukaryotic translation initiation factor 6"
species:10116 "Rattus norvegicus" [GO:0000054 "ribosomal subunit
export from nucleus" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005638 "lamin
filament" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0042256 "mature ribosome
assembly" evidence=IEA] [GO:0042273 "ribosomal large subunit
biogenesis" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0043023 "ribosomal large subunit binding"
evidence=IEA] InterPro:IPR002769 Pfam:PF01912 PIRSF:PIRSF006413
SMART:SM00654 HAMAP:MF_00032 RGD:1305373 GO:GO:0005737
GO:GO:0005730 GO:GO:0043022 EMBL:CH474050 GO:GO:0003743
GO:GO:0042256 KO:K03264 PANTHER:PTHR10784 TIGRFAMs:TIGR00323
CTD:3692 HOVERGEN:HBG001300 EMBL:BC105764 IPI:IPI00364976
RefSeq:NP_001032429.1 UniGene:Rn.190833 ProteinModelPortal:Q3KRD8
SMR:Q3KRD8 PRIDE:Q3KRD8 GeneID:305506 KEGG:rno:305506
NextBio:654737 Genevestigator:Q3KRD8 Uniprot:Q3KRD8
Length = 245
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 116/151 (76%), Positives = 129/151 (85%)
Query: 34 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYC 93
Q +R+EERLSALGN CND+VAL H DLDRETEEI+ADVL VEVFRQT+A +LVGSYC
Sbjct: 93 QIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYC 152
Query: 94 SFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTA 153
FSN+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVI AG+ VNDW AFCG DTT+
Sbjct: 153 VFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTS 212
Query: 154 TELSVIESVFKLREAQPNAIVDEMRKSLIDS 184
TELSV+ESVFKL EA+P+ I MR SLIDS
Sbjct: 213 TELSVVESVFKLNEAKPSTIATSMRDSLIDS 243
>UNIPROTKB|F1NGL6 [details] [associations]
symbol:EIF6 "Eukaryotic translation initiation factor 6"
species:9031 "Gallus gallus" [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0042256 "mature ribosome assembly" evidence=IEA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IEA]
[GO:0043023 "ribosomal large subunit binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005638 "lamin filament" evidence=IEA]
InterPro:IPR002769 Pfam:PF01912 PIRSF:PIRSF006413 SMART:SM00654
HAMAP:MF_00032 GO:GO:0005737 GO:GO:0005730 GO:GO:0043022
GO:GO:0042273 GO:GO:0003743 GO:GO:0042256 GO:GO:0043023
PANTHER:PTHR10784 TIGRFAMs:TIGR00323 OMA:QFENSNE
GeneTree:ENSGT00390000015972 GO:GO:0005638 EMBL:AADN02019500
IPI:IPI00576279 Ensembl:ENSGALT00000002799 Uniprot:F1NGL6
Length = 242
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 115/148 (77%), Positives = 128/148 (86%)
Query: 36 KRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSF 95
+R+EERLSALGN CND+VAL H DLDRETEEI+ADVL VEVFRQT+A +LVGSYC F
Sbjct: 95 QRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYCVF 154
Query: 96 SNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATE 155
SN+GG+VHP TSIED DELS+LLQVPLVAGTVNRGSEVIGAG+ VNDW AFCG DTT+TE
Sbjct: 155 SNQGGIVHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIGAGMVVNDWCAFCGLDTTSTE 214
Query: 156 LSVIESVFKLREAQPNAIVDEMRKSLID 183
LSVIES+FKL EAQP+ I MR SLID
Sbjct: 215 LSVIESIFKLNEAQPSTIATNMRDSLID 242
>ZFIN|ZDB-GENE-031118-110 [details] [associations]
symbol:eif6 "eukaryotic translation initiation
factor 6" species:7955 "Danio rerio" [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0042256 "mature ribosome assembly" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0043023 "ribosomal large subunit
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IEA]
InterPro:IPR002769 Pfam:PF01912 PIRSF:PIRSF006413 SMART:SM00654
HAMAP:MF_00032 ZFIN:ZDB-GENE-031118-110 GO:GO:0005737 GO:GO:0005730
GO:GO:0043022 GO:GO:0003743 GO:GO:0042256 eggNOG:COG1976
HOGENOM:HOG000230605 KO:K03264 PANTHER:PTHR10784 TIGRFAMs:TIGR00323
OMA:QFENSNE CTD:3692 GeneTree:ENSGT00390000015972
HOVERGEN:HBG001300 EMBL:AY398366 EMBL:AL929108 EMBL:BC071374
EMBL:BC049488 IPI:IPI00509697 RefSeq:NP_957238.1 UniGene:Dr.76244
ProteinModelPortal:Q6ZM19 SMR:Q6ZM19 STRING:Q6ZM19 PRIDE:Q6ZM19
Ensembl:ENSDART00000016890 GeneID:386850 KEGG:dre:386850
InParanoid:Q7ZWC1 NextBio:20814044 ArrayExpress:Q6ZM19 Bgee:Q6ZM19
Uniprot:Q6ZM19
Length = 245
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 116/149 (77%), Positives = 129/149 (86%)
Query: 36 KRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSF 95
+R+EERLSALGN IACND+VAL H DLDRETEEI+AD L VEVFRQT+A +LVGSYC+F
Sbjct: 95 QRVEERLSALGNVIACNDYVALVHPDLDRETEEILADTLKVEVFRQTVAEQVLVGSYCAF 154
Query: 96 SNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATE 155
SN+GGLVH TSIED DELS+LLQVPLVAGTVNRGSEVI AG+ VNDW AFCG DTT+TE
Sbjct: 155 SNQGGLVHAKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTE 214
Query: 156 LSVIESVFKLREAQPNAIVDEMRKSLIDS 184
LSVIESVF+L E QP+AI MR SLIDS
Sbjct: 215 LSVIESVFRLSETQPSAIATTMRDSLIDS 243
>UNIPROTKB|E2R1S5 [details] [associations]
symbol:EIF6 "Eukaryotic translation initiation factor 6"
species:9615 "Canis lupus familiaris" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005638
"lamin filament" evidence=IEA] [GO:0043023 "ribosomal large subunit
binding" evidence=IEA] [GO:0042273 "ribosomal large subunit
biogenesis" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0000054 "ribosomal subunit export from nucleus"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
InterPro:IPR002769 Pfam:PF01912 PIRSF:PIRSF006413 SMART:SM00654
HAMAP:MF_00032 GO:GO:0005737 GO:GO:0005730 GO:GO:0043022
GO:GO:0042273 GO:GO:0003743 GO:GO:0042256 GO:GO:0043023
GO:GO:0000054 PANTHER:PTHR10784 TIGRFAMs:TIGR00323 OMA:QFENSNE
GeneTree:ENSGT00390000015972 GO:GO:0005638 EMBL:AAEX03013911
ProteinModelPortal:E2R1S5 Ensembl:ENSCAFT00000012778
NextBio:20852730 Uniprot:E2R1S5
Length = 242
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 115/150 (76%), Positives = 127/150 (84%)
Query: 34 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYC 93
Q +R+EERLSALGN CND+VAL H DLDRETEEI+ADVL VEVFRQT+A +LVGSY
Sbjct: 93 QIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYS 152
Query: 94 SFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTA 153
FSN+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVI AG+ VNDW AFCG DTT+
Sbjct: 153 VFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTS 212
Query: 154 TELSVIESVFKLREAQPNAIVDEMRKSLID 183
TELSV+ESVFKL EAQP+ I MR SLID
Sbjct: 213 TELSVVESVFKLNEAQPSTIATSMRDSLID 242
>CGD|CAL0001603 [details] [associations]
symbol:orf19.1815 species:5476 "Candida albicans" [GO:0043023
"ribosomal large subunit binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000054 "ribosomal subunit export from nucleus" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR002769 Pfam:PF01912 PIRSF:PIRSF006413 SMART:SM00654
CGD:CAL0001603 HAMAP:MF_00032 GO:GO:0005737 GO:GO:0005730
GO:GO:0043022 GO:GO:0003743 GO:GO:0042256 eggNOG:COG1976
HOGENOM:HOG000230605 KO:K03264 PANTHER:PTHR10784 TIGRFAMs:TIGR00323
EMBL:AACQ01000270 EMBL:AACQ01000269 RefSeq:XP_710430.1
RefSeq:XP_710434.1 ProteinModelPortal:Q59L13 SMR:Q59L13
STRING:Q59L13 GeneID:3647964 GeneID:3647968 KEGG:cal:CaO19.1815
KEGG:cal:CaO19.9378 Uniprot:Q59L13
Length = 245
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 109/150 (72%), Positives = 132/150 (88%)
Query: 36 KRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSF 95
+R+EERLSALGN I CND+VAL H D++RETEE+IADVLGVEVFRQTIAGN+LVGSYCS
Sbjct: 95 QRVEERLSALGNVICCNDYVALVHPDIERETEELIADVLGVEVFRQTIAGNVLVGSYCSL 154
Query: 96 SNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATE 155
SN+GGLVHP TSI+D +ELS+LLQVPLVAGTVNRGS V+GAG+ VNDW + G DTTA E
Sbjct: 155 SNQGGLVHPQTSIQDQEELSSLLQVPLVAGTVNRGSSVVGAGMVVNDWLSVAGLDTTAPE 214
Query: 156 LSVIESVFKLREAQPNAIVDEMRKSLIDSY 185
LSVIES+F+L++AQP+AI +R +LI++Y
Sbjct: 215 LSVIESIFRLQDAQPDAIGGNLRDTLIETY 244
>POMBASE|SPCC1919.09 [details] [associations]
symbol:tif6 "translation initiation factor eIF6"
species:4896 "Schizosaccharomyces pombe" [GO:0000054 "ribosomal
subunit export from nucleus" evidence=IEA] [GO:0002183 "cytoplasmic
translational initiation" evidence=NAS] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0043023 "ribosomal large subunit binding" evidence=IEA]
InterPro:IPR002769 Pfam:PF01912 PIRSF:PIRSF006413 SMART:SM00654
PomBase:SPCC1919.09 HAMAP:MF_00032 GO:GO:0005829 GO:GO:0005634
GO:GO:0005730 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0043022
GO:GO:0003743 GO:GO:0042256 GO:GO:0002183 eggNOG:COG1976
HOGENOM:HOG000230605 KO:K03264 PANTHER:PTHR10784 TIGRFAMs:TIGR00323
OMA:QFENSNE OrthoDB:EOG4M951G PIR:T41234 RefSeq:NP_588491.1
ProteinModelPortal:O94476 SMR:O94476 STRING:O94476
EnsemblFungi:SPCC1919.09.1 GeneID:2539126 KEGG:spo:SPCC1919.09
NextBio:20800298 Uniprot:O94476
Length = 244
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 107/150 (71%), Positives = 132/150 (88%)
Query: 36 KRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSF 95
+R++ERLSALGN +ACND+VAL H D++RETEEIIADVL VEVFRQT+AGN+L GSYC+
Sbjct: 95 QRVDERLSALGNIVACNDYVALVHPDIERETEEIIADVLDVEVFRQTVAGNVLTGSYCAL 154
Query: 96 SNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATE 155
SN+G LVHP TSI++ DELS+LLQVPLVAGT+NRGS+VIGAGL VNDW AF G DTTATE
Sbjct: 155 SNQGALVHPRTSIQEQDELSSLLQVPLVAGTINRGSDVIGAGLVVNDWCAFAGLDTTATE 214
Query: 156 LSVIESVFKLREAQPNAIVDEMRKSLIDSY 185
L+V ES+FKL++AQP+AI+ R +L++SY
Sbjct: 215 LAVCESIFKLQDAQPSAIISN-RDTLVESY 243
>SGD|S000006220 [details] [associations]
symbol:TIF6 "Constituent of 66S pre-ribosomal particles"
species:4932 "Saccharomyces cerevisiae" [GO:0043023 "ribosomal
large subunit binding" evidence=IEA;IDA] [GO:0043022 "ribosome
binding" evidence=IEA] [GO:0042273 "ribosomal large subunit
biogenesis" evidence=IEA;IMP;IPI] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IDA] [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0000466
"maturation of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0000054 "ribosomal subunit export
from nucleus" evidence=IEA;IGI] [GO:0006364 "rRNA processing"
evidence=IGI] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0042256 "mature ribosome assembly" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002769 Pfam:PF01912
PIRSF:PIRSF006413 SMART:SM00654 SGD:S000006220 HAMAP:MF_00032
GO:GO:0005737 GO:GO:0005730 GO:GO:0043022 EMBL:Z71255 EMBL:U31900
EMBL:BK006949 GO:GO:0030687 GO:GO:0003743 EMBL:Z49919 GO:GO:0000463
GO:GO:0042256 GO:GO:0000466 GO:GO:0043023 GO:GO:0000054
eggNOG:COG1976 HOGENOM:HOG000230605 KO:K03264 PANTHER:PTHR10784
TIGRFAMs:TIGR00323 OMA:QFENSNE GeneTree:ENSGT00390000015972
OrthoDB:EOG4M951G EMBL:AY692916 PIR:S57550 RefSeq:NP_015341.1
PDB:1G62 PDB:2X7N PDB:3J2I PDBsum:1G62 PDBsum:2X7N PDBsum:3J2I
ProteinModelPortal:Q12522 SMR:Q12522 DIP:DIP-5395N IntAct:Q12522
MINT:MINT-527536 STRING:Q12522 PaxDb:Q12522 PeptideAtlas:Q12522
EnsemblFungi:YPR016C GeneID:856126 KEGG:sce:YPR016C CYGD:YPR016c
EvolutionaryTrace:Q12522 NextBio:981212 Genevestigator:Q12522
GermOnline:YPR016C Uniprot:Q12522
Length = 245
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 107/150 (71%), Positives = 131/150 (87%)
Query: 36 KRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSF 95
+R+EERLSALGN I CND+VAL H D+DRETEE+I+DVLGVEVFRQTI+GNILVGSYCS
Sbjct: 95 QRVEERLSALGNVICCNDYVALVHPDIDRETEELISDVLGVEVFRQTISGNILVGSYCSL 154
Query: 96 SNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATE 155
SN+GGLVHP TS++D +ELS+LLQVPLVAGTVNRGS V+GAG+ VND+ A G DTTA E
Sbjct: 155 SNQGGLVHPQTSVQDQEELSSLLQVPLVAGTVNRGSSVVGAGMVVNDYLAVTGLDTTAPE 214
Query: 156 LSVIESVFKLREAQPNAIVDEMRKSLIDSY 185
LSVIES+F+L++AQP +I +R +LI++Y
Sbjct: 215 LSVIESIFRLQDAQPESISGNLRDTLIETY 244
>TAIR|locus:2063927 [details] [associations]
symbol:eIF6B "AT2G39820" species:3702 "Arabidopsis
thaliana" [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0006413 "translational initiation" evidence=ISS]
[GO:0042256 "mature ribosome assembly" evidence=IEA] [GO:0043022
"ribosome binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR002769 Pfam:PF01912 PIRSF:PIRSF006413 SMART:SM00654
HAMAP:MF_00032 GO:GO:0005829 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0043022 GO:GO:0003743
EMBL:AC003000 GO:GO:0042256 EMBL:BX821100 IPI:IPI00534073
PIR:T01012 RefSeq:NP_181512.1 UniGene:At.50125
ProteinModelPortal:O22290 SMR:O22290 STRING:O22290 PaxDb:O22290
PRIDE:O22290 EnsemblPlants:AT2G39820.1 GeneID:818569
KEGG:ath:AT2G39820 TAIR:At2g39820 eggNOG:COG1976
HOGENOM:HOG000230605 InParanoid:O22290 KO:K03264 OMA:RIEEPIC
PhylomeDB:O22290 ProtClustDB:CLSN2683375 Genevestigator:O22290
GermOnline:AT2G39820 PANTHER:PTHR10784 TIGRFAMs:TIGR00323
Uniprot:O22290
Length = 247
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 106/151 (70%), Positives = 131/151 (86%)
Query: 36 KRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSF 95
+RIEE + ALGN IACND+VAL H L+++TEEII+DVLGVEV+RQTIA N LVGSYCS
Sbjct: 97 QRIEEPICALGNAIACNDYVALVHPKLEKDTEEIISDVLGVEVYRQTIANNELVGSYCSL 156
Query: 96 SNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATE 155
SN GG+VH +T++E++ EL+ L+QVPLVAGTVNRGS+VI AGLTVNDWTAFCGSDTTA E
Sbjct: 157 SNNGGMVHSNTNVEEMVELANLVQVPLVAGTVNRGSQVISAGLTVNDWTAFCGSDTTAVE 216
Query: 156 LSVIESVFKLREAQPNAIVDEMRKSLIDSYV 186
LSV+ ++FKL ++QP+ + EMRKSLID+YV
Sbjct: 217 LSVVNNIFKLVQSQPDFVGSEMRKSLIDTYV 247
>DICTYBASE|DDB_G0276493 [details] [associations]
symbol:eIF6 "eukaryotic translation initiation factor
6" species:44689 "Dictyostelium discoideum" [GO:0043023 "ribosomal
large subunit binding" evidence=IEA;ISS] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0005730 "nucleolus" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043022 "ribosome
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002769 Pfam:PF01912
PIRSF:PIRSF006413 SMART:SM00654 dictyBase:DDB_G0276493
HAMAP:MF_00032 GO:GO:0005737 GO:GO:0005730
GenomeReviews:CM000151_GR GO:GO:0043022 GO:GO:0042273 GO:GO:0003743
EMBL:AAFI02000015 GO:GO:0042256 GO:GO:0043023 eggNOG:COG1976
KO:K03264 PANTHER:PTHR10784 TIGRFAMs:TIGR00323 HSSP:Q12522
OMA:QFENSNE RefSeq:XP_643108.1 ProteinModelPortal:Q551M2 SMR:Q551M2
STRING:Q551M2 EnsemblProtists:DDB0234038 GeneID:8620512
KEGG:ddi:DDB_G0276493 ProtClustDB:PTZ00136 Uniprot:Q551M2
Length = 244
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 102/149 (68%), Positives = 129/149 (86%)
Query: 36 KRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSF 95
+RIEE+ SALGNCIA ND+VAL H D+DRETEEIIADVLGVEVFRQT++GN+LVG+YC+
Sbjct: 95 QRIEEKFSALGNCIATNDYVALVHPDIDRETEEIIADVLGVEVFRQTVSGNVLVGTYCAL 154
Query: 96 SNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATE 155
+N+G LVHP TSI D DELS+LLQVPLVAGTVNRG+E + AG VNDWTA G+DTTATE
Sbjct: 155 TNQGALVHPMTSIADQDELSSLLQVPLVAGTVNRGNECVAAGCVVNDWTAIVGADTTATE 214
Query: 156 LSVIESVFKLREAQPNAIVDEMRKSLIDS 184
+SVIES+F L+ ++P+ I++ +R S++D+
Sbjct: 215 ISVIESIFALQGSKPSNIINNIRNSIVDN 243
>FB|FBgn0034915 [details] [associations]
symbol:eIF6 "eIF6" species:7227 "Drosophila melanogaster"
[GO:0005829 "cytosol" evidence=ISS;NAS] [GO:0006412 "translation"
evidence=NAS] [GO:0006413 "translational initiation" evidence=ISS]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0043022 "ribosome binding" evidence=IEA] [GO:0042256 "mature
ribosome assembly" evidence=IEA] InterPro:IPR002769 Pfam:PF01912
PIRSF:PIRSF006413 SMART:SM00654 HAMAP:MF_00032 EMBL:AE013599
GO:GO:0005829 GO:GO:0005730 GO:GO:0043022 GO:GO:0003743
GO:GO:0042256 eggNOG:COG1976 KO:K03264 PANTHER:PTHR10784
TIGRFAMs:TIGR00323 OMA:QFENSNE CTD:3692
GeneTree:ENSGT00390000015972 EMBL:X97641 EMBL:AY094688
RefSeq:NP_659573.1 UniGene:Dm.33632 ProteinModelPortal:P56538
SMR:P56538 STRING:P56538 PaxDb:P56538 PRIDE:P56538
EnsemblMetazoa:FBtr0072235 GeneID:37776 KEGG:dme:Dmel_CG17611
UCSC:CG17611-RA FlyBase:FBgn0034915 InParanoid:P56538
OrthoDB:EOG46WWRC PhylomeDB:P56538 GenomeRNAi:37776 NextBio:805352
Bgee:P56538 GermOnline:CG17611 Uniprot:P56538
Length = 245
Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
Identities = 107/147 (72%), Positives = 125/147 (85%)
Query: 37 RIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFS 96
R+EERLSALGN IACND+VAL H DLD+ETEEIIADVL VEVFRQTIA N LVGSY S
Sbjct: 96 RVEERLSALGNVIACNDYVALVHPDLDKETEEIIADVLKVEVFRQTIADNSLVGSYAVLS 155
Query: 97 NRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATEL 156
N+GG+VHP TSI+D DELS+LLQVPLVAGTVNRGSEV+ AG+ VNDW +F G +TTATE+
Sbjct: 156 NQGGMVHPKTSIQDQDELSSLLQVPLVAGTVNRGSEVLAAGMVVNDWLSFVGMNTTATEI 215
Query: 157 SVIESVFKLREAQPNAIVDEMRKSLID 183
SVIESVFKL +AQP + ++R +LI+
Sbjct: 216 SVIESVFKLNQAQPATVTTKLRAALIE 242
>UNIPROTKB|G4MUS0 [details] [associations]
symbol:TIF6 "Eukaryotic translation initiation factor 6"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR002769 Pfam:PF01912
PIRSF:PIRSF006413 SMART:SM00654 HAMAP:MF_00032 GO:GO:0005737
GO:GO:0005730 GO:GO:0043022 GO:GO:0042273 GO:GO:0003743
GO:GO:0043581 EMBL:CM001232 GO:GO:0042256 GO:GO:0043023
GO:GO:0000054 KO:K03264 PANTHER:PTHR10784 TIGRFAMs:TIGR00323
RefSeq:XP_003714657.1 ProteinModelPortal:G4MUS0 SMR:G4MUS0
EnsemblFungi:MGG_01671T0 GeneID:2679613 KEGG:mgr:MGG_01671
Uniprot:G4MUS0
Length = 246
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 106/151 (70%), Positives = 127/151 (84%)
Query: 36 KRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSF 95
+RIEERLSALGN IA NDH+AL H DL+RETEEIIADVLGVEVFRQT+A N+LVGSY S
Sbjct: 95 QRIEERLSALGNVIATNDHIALVHPDLERETEEIIADVLGVEVFRQTVADNVLVGSYMSL 154
Query: 96 SNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATE 155
SN+GGLVHP TSI+D DELS+LLQVPLVAG++NRGS V+GAG+ VNDW A G DTTATE
Sbjct: 155 SNQGGLVHPKTSIQDQDELSSLLQVPLVAGSINRGSNVVGAGMVVNDWMAVTGLDTTATE 214
Query: 156 LSVIESVFKLREAQ-PNAIVDEMRKSLIDSY 185
LSV+ESVF+L E P+ I M+ ++++S+
Sbjct: 215 LSVVESVFRLGEGLGPSNINTNMKDTMVESF 245
>ASPGD|ASPL0000076897 [details] [associations]
symbol:AN8824 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0043023 "ribosomal large subunit binding"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0042256 "mature ribosome assembly" evidence=IEA] [GO:0000466
"maturation of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000054
"ribosomal subunit export from nucleus" evidence=IEA] [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR002769
Pfam:PF01912 PIRSF:PIRSF006413 SMART:SM00654 HAMAP:MF_00032
GO:GO:0005737 GO:GO:0005730 GO:GO:0043022 GO:GO:0003743
EMBL:BN001303 GO:GO:0042256 eggNOG:COG1976 HOGENOM:HOG000230605
KO:K03264 PANTHER:PTHR10784 TIGRFAMs:TIGR00323 OMA:QFENSNE
EMBL:AACD01000162 RefSeq:XP_682093.1 ProteinModelPortal:Q5ASA6
SMR:Q5ASA6 STRING:Q5ASA6 EnsemblFungi:CADANIAT00006233
GeneID:2868426 KEGG:ani:AN8824.2 OrthoDB:EOG4M951G Uniprot:Q5ASA6
Length = 247
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 108/152 (71%), Positives = 124/152 (81%)
Query: 36 KRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSF 95
+RIEERLSALGN I CNDHVAL H DL+RETEEIIADVLGVEVFRQTIA N+L GSY +
Sbjct: 95 QRIEERLSALGNVICCNDHVALIHPDLERETEEIIADVLGVEVFRQTIADNVLTGSYMAL 154
Query: 96 SNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATE 155
SN+GG+VHP TSI D DELS+LLQVPLVAG+VNRGS V+GAGL VNDW A G DTTATE
Sbjct: 155 SNQGGIVHPKTSIRDQDELSSLLQVPLVAGSVNRGSPVVGAGLVVNDWLAVTGLDTTATE 214
Query: 156 LSVIESVFKLREAQPNAIVDEM--RKSLIDSY 185
LSVIESVF+L E P I + + S+++S+
Sbjct: 215 LSVIESVFRLGENGPGGIGQGVANKDSIVESF 246
>UNIPROTKB|B7ZBG9 [details] [associations]
symbol:EIF6 "Eukaryotic translation initiation factor 6"
species:9606 "Homo sapiens" [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0000054 "ribosomal subunit export from nucleus"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0043023 "ribosomal large subunit binding"
evidence=IEA] InterPro:IPR002769 Pfam:PF01912 SMART:SM00654
HAMAP:MF_00032 GO:GO:0005737 GO:GO:0005730 GO:GO:0043022
GO:GO:0042273 GO:GO:0003743 GO:GO:0042256 GO:GO:0043023
GO:GO:0000054 HOGENOM:HOG000230605 KO:K03264 PANTHER:PTHR10784
CTD:3692 HOVERGEN:HBG001300 EMBL:AL121753 RefSeq:NP_852131.1
UniGene:Hs.654848 DNASU:3692 GeneID:3692 KEGG:hsa:3692
HGNC:HGNC:6159 PharmGKB:PA29958 ChiTaRS:EIF6 GenomeRNAi:3692
NextBio:14465 IPI:IPI00375391 SMR:B7ZBG9 STRING:B7ZBG9
Ensembl:ENST00000374443 UCSC:uc002xbz.1 Uniprot:B7ZBG9
Length = 226
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 95/120 (79%), Positives = 104/120 (86%)
Query: 65 ETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVA 124
ETEEI+ADVL VEVFRQT+A +LVGSYC FSN+GGLVHP TSIED DELS+LLQVPLVA
Sbjct: 105 ETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVPLVA 164
Query: 125 GTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPNAIVDEMRKSLIDS 184
GTVNRGSEVI AG+ VNDW AFCG DTT+TELSV+ESVFKL EAQP+ I MR SLIDS
Sbjct: 165 GTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAQPSTIATSMRDSLIDS 224
>WB|WBGene00001234 [details] [associations]
symbol:eif-6 species:6239 "Caenorhabditis elegans"
[GO:0042256 "mature ribosome assembly" evidence=IEA] [GO:0043022
"ribosome binding" evidence=IEA] [GO:0040010 "positive regulation
of growth rate" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR002769 Pfam:PF01912 PIRSF:PIRSF006413
SMART:SM00654 HAMAP:MF_00032 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0005730
GO:GO:0002119 GO:GO:0043022 GO:GO:0003743 GO:GO:0042256
eggNOG:COG1976 HOGENOM:HOG000230605 KO:K03264 PANTHER:PTHR10784
TIGRFAMs:TIGR00323 OMA:QFENSNE GeneTree:ENSGT00390000015972
EMBL:Z99709 PIR:T19988 RefSeq:NP_493272.1 ProteinModelPortal:O62106
SMR:O62106 IntAct:O62106 STRING:O62106 PaxDb:O62106
EnsemblMetazoa:C47B2.5.1 EnsemblMetazoa:C47B2.5.2 GeneID:173169
KEGG:cel:CELE_C47B2.5 UCSC:C47B2.5.1 CTD:173169 WormBase:C47B2.5
InParanoid:O62106 NextBio:878561 Uniprot:O62106
Length = 246
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 87/150 (58%), Positives = 115/150 (76%)
Query: 36 KRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSF 95
+R++ERLSALGN IACNDHVA+ H ++ ETE+ + +VL VEVFR ++A N LVGSYC
Sbjct: 95 RRVDERLSALGNVIACNDHVAIVHAEISAETEQALVEVLKVEVFRVSLAQNSLVGSYCIL 154
Query: 96 SNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATE 155
S+ G LV T E E++ LLQ+P+VAGT NRGSE+IGAG+ VNDW AFCG D+T+TE
Sbjct: 155 SSNGCLVAARTPPETQREIAALLQIPVVAGTCNRGSELIGAGMVVNDWVAFCGLDSTSTE 214
Query: 156 LSVIESVFKLRE-AQPNAIVDEMRKSLIDS 184
LSV+ES+FKL E P +I +++R +LI+S
Sbjct: 215 LSVVESIFKLGEQGAPTSISNQLRDTLIES 244
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.391 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 186 186 0.00083 110 3 11 22 0.42 32
31 0.41 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 592 (63 KB)
Total size of DFA: 149 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.76u 0.10s 16.86t Elapsed: 00:00:01
Total cpu time: 16.77u 0.10s 16.87t Elapsed: 00:00:01
Start: Tue May 21 01:12:29 2013 End: Tue May 21 01:12:30 2013