BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029868
(186 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M060|IF62_ARATH Eukaryotic translation initiation factor 6-2 OS=Arabidopsis
thaliana GN=EIF6-2 PE=2 SV=1
Length = 245
Score = 285 bits (728), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 134/155 (86%), Positives = 150/155 (96%)
Query: 32 QPQTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGS 91
Q +RI+ERLSALGNCIACND+VALAHTDLD+ETEEIIADVLGVEVFRQTIAGNILVGS
Sbjct: 91 QVVVQRIDERLSALGNCIACNDYVALAHTDLDKETEEIIADVLGVEVFRQTIAGNILVGS 150
Query: 92 YCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDT 151
YC+ SN+GG+VHPHTS+EDL+ELSTLLQVPLVAGTVNRGSEVI AG+TVNDWT+FCGSDT
Sbjct: 151 YCALSNKGGMVHPHTSVEDLEELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTSFCGSDT 210
Query: 152 TATELSVIESVFKLREAQPNAIVDEMRKSLIDSYV 186
TATELSVI+S+FKLREAQP++IVDEMRKSLID+YV
Sbjct: 211 TATELSVIDSIFKLREAQPSSIVDEMRKSLIDTYV 245
>sp|P56537|IF6_HUMAN Eukaryotic translation initiation factor 6 OS=Homo sapiens GN=EIF6
PE=1 SV=1
Length = 245
Score = 242 bits (618), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 117/151 (77%), Positives = 129/151 (85%)
Query: 34 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYC 93
Q +R+EERLSALGN CND+VAL H DLDRETEEI+ADVL VEVFRQT+A +LVGSYC
Sbjct: 93 QIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYC 152
Query: 94 SFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTA 153
FSN+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVI AG+ VNDW AFCG DTT+
Sbjct: 153 VFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTS 212
Query: 154 TELSVIESVFKLREAQPNAIVDEMRKSLIDS 184
TELSV+ESVFKL EAQP+ I MR SLIDS
Sbjct: 213 TELSVVESVFKLNEAQPSTIATSMRDSLIDS 243
>sp|Q9TU47|IF6_BOVIN Eukaryotic translation initiation factor 6 OS=Bos taurus GN=EIF6
PE=2 SV=2
Length = 245
Score = 242 bits (618), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/151 (77%), Positives = 129/151 (85%)
Query: 34 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYC 93
Q +R+EERLSALGN CND+VAL H DLDRETEEI+ADVL VEVFRQT+A +LVGSYC
Sbjct: 93 QIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYC 152
Query: 94 SFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTA 153
FSN+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVI AG+ VNDW AFCG DTT+
Sbjct: 153 VFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTS 212
Query: 154 TELSVIESVFKLREAQPNAIVDEMRKSLIDS 184
TELSV+ESVFKL EAQP+ I MR SLIDS
Sbjct: 213 TELSVVESVFKLNEAQPSTIATSMRDSLIDS 243
>sp|O55135|IF6_MOUSE Eukaryotic translation initiation factor 6 OS=Mus musculus GN=Eif6
PE=1 SV=2
Length = 245
Score = 241 bits (615), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/151 (76%), Positives = 129/151 (85%)
Query: 34 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYC 93
Q +R+EERLSALGN CND+VAL H DLDRETEEI+ADVL VEVFRQT+A +LVGSYC
Sbjct: 93 QIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYC 152
Query: 94 SFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTA 153
FSN+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVI AG+ VNDW AFCG DTT+
Sbjct: 153 VFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTS 212
Query: 154 TELSVIESVFKLREAQPNAIVDEMRKSLIDS 184
TELSV+ESVFKL EA+P+ I MR SLIDS
Sbjct: 213 TELSVVESVFKLNEAKPSTIATSMRDSLIDS 243
>sp|Q3KRD8|IF6_RAT Eukaryotic translation initiation factor 6 OS=Rattus norvegicus
GN=Eif6 PE=2 SV=1
Length = 245
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/151 (76%), Positives = 129/151 (85%)
Query: 34 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYC 93
Q +R+EERLSALGN CND+VAL H DLDRETEEI+ADVL VEVFRQT+A +LVGSYC
Sbjct: 93 QIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYC 152
Query: 94 SFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTA 153
FSN+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVI AG+ VNDW AFCG DTT+
Sbjct: 153 VFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTS 212
Query: 154 TELSVIESVFKLREAQPNAIVDEMRKSLIDS 184
TELSV+ESVFKL EA+P+ I MR SLIDS
Sbjct: 213 TELSVVESVFKLNEAKPSTIATSMRDSLIDS 243
>sp|Q6GR45|IF6_XENLA Eukaryotic translation initiation factor 6 OS=Xenopus laevis
GN=eif6 PE=2 SV=1
Length = 245
Score = 239 bits (611), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 116/151 (76%), Positives = 130/151 (86%)
Query: 34 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYC 93
+ +R+EERLSALGN IACND+VAL H DLDRETEEI+ADVL VEVFRQTIA +LVGSYC
Sbjct: 93 RIQRVEERLSALGNVIACNDYVALVHPDLDRETEEILADVLKVEVFRQTIAEQVLVGSYC 152
Query: 94 SFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTA 153
+FSN+GGL+HP TSIED DELS+LLQVPLV GTVNRGSEVI AG+ VNDW AFCG DTT+
Sbjct: 153 AFSNQGGLLHPKTSIEDQDELSSLLQVPLVTGTVNRGSEVIAAGMVVNDWCAFCGLDTTS 212
Query: 154 TELSVIESVFKLREAQPNAIVDEMRKSLIDS 184
TELSVIESVFKL +A P+ I MR SLIDS
Sbjct: 213 TELSVIESVFKLSDAHPSTIATSMRDSLIDS 243
>sp|Q6ZM19|IF6_DANRE Eukaryotic translation initiation factor 6 OS=Danio rerio GN=eif6
PE=2 SV=1
Length = 245
Score = 239 bits (609), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/151 (76%), Positives = 130/151 (86%)
Query: 34 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYC 93
+ +R+EERLSALGN IACND+VAL H DLDRETEEI+AD L VEVFRQT+A +LVGSYC
Sbjct: 93 RIQRVEERLSALGNVIACNDYVALVHPDLDRETEEILADTLKVEVFRQTVAEQVLVGSYC 152
Query: 94 SFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTA 153
+FSN+GGLVH TSIED DELS+LLQVPLVAGTVNRGSEVI AG+ VNDW AFCG DTT+
Sbjct: 153 AFSNQGGLVHAKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTS 212
Query: 154 TELSVIESVFKLREAQPNAIVDEMRKSLIDS 184
TELSVIESVF+L E QP+AI MR SLIDS
Sbjct: 213 TELSVIESVFRLSETQPSAIATTMRDSLIDS 243
>sp|Q59L13|IF6_CANAL Eukaryotic translation initiation factor 6 OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=TIF6 PE=3 SV=1
Length = 245
Score = 234 bits (597), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 109/152 (71%), Positives = 133/152 (87%)
Query: 34 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYC 93
+ +R+EERLSALGN I CND+VAL H D++RETEE+IADVLGVEVFRQTIAGN+LVGSYC
Sbjct: 93 KIQRVEERLSALGNVICCNDYVALVHPDIERETEELIADVLGVEVFRQTIAGNVLVGSYC 152
Query: 94 SFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTA 153
S SN+GGLVHP TSI+D +ELS+LLQVPLVAGTVNRGS V+GAG+ VNDW + G DTTA
Sbjct: 153 SLSNQGGLVHPQTSIQDQEELSSLLQVPLVAGTVNRGSSVVGAGMVVNDWLSVAGLDTTA 212
Query: 154 TELSVIESVFKLREAQPNAIVDEMRKSLIDSY 185
ELSVIES+F+L++AQP+AI +R +LI++Y
Sbjct: 213 PELSVIESIFRLQDAQPDAIGGNLRDTLIETY 244
>sp|A4RSQ6|IF6_OSTLU Eukaryotic translation initiation factor 6 OS=Ostreococcus
lucimarinus (strain CCE9901) GN=EIF6 PE=3 SV=2
Length = 245
Score = 234 bits (597), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 106/151 (70%), Positives = 132/151 (87%)
Query: 36 KRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSF 95
+R EERLSALGNC+ACNDHVAL H D+D+ETEEIIADVLGVEVFRQ++AGN+LVGS+C F
Sbjct: 95 QRTEERLSALGNCVACNDHVALVHPDIDQETEEIIADVLGVEVFRQSVAGNVLVGSFCKF 154
Query: 96 SNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATE 155
SNRGG+VHP S++++DELS+LLQVPLVAGT+NRGS+VIGAGL VNDW AFCG DTT+TE
Sbjct: 155 SNRGGMVHPQASVQEVDELSSLLQVPLVAGTINRGSDVIGAGLLVNDWIAFCGLDTTSTE 214
Query: 156 LSVIESVFKLREAQPNAIVDEMRKSLIDSYV 186
+ VIES+++L A + V ++R SL+D+ V
Sbjct: 215 IQVIESIYQLHGADSSGAVRDIRASLLDTLV 245
>sp|Q12522|IF6_YEAST Eukaryotic translation initiation factor 6 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TIF6 PE=1
SV=1
Length = 245
Score = 230 bits (587), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 107/152 (70%), Positives = 132/152 (86%)
Query: 34 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYC 93
+ +R+EERLSALGN I CND+VAL H D+DRETEE+I+DVLGVEVFRQTI+GNILVGSYC
Sbjct: 93 KIQRVEERLSALGNVICCNDYVALVHPDIDRETEELISDVLGVEVFRQTISGNILVGSYC 152
Query: 94 SFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTA 153
S SN+GGLVHP TS++D +ELS+LLQVPLVAGTVNRGS V+GAG+ VND+ A G DTTA
Sbjct: 153 SLSNQGGLVHPQTSVQDQEELSSLLQVPLVAGTVNRGSSVVGAGMVVNDYLAVTGLDTTA 212
Query: 154 TELSVIESVFKLREAQPNAIVDEMRKSLIDSY 185
ELSVIES+F+L++AQP +I +R +LI++Y
Sbjct: 213 PELSVIESIFRLQDAQPESISGNLRDTLIETY 244
>sp|O94476|IF6_SCHPO Eukaryotic translation initiation factor 6 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=tif6 PE=3 SV=1
Length = 244
Score = 229 bits (583), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 107/152 (70%), Positives = 133/152 (87%), Gaps = 1/152 (0%)
Query: 34 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYC 93
+ +R++ERLSALGN +ACND+VAL H D++RETEEIIADVL VEVFRQT+AGN+L GSYC
Sbjct: 93 KIQRVDERLSALGNIVACNDYVALVHPDIERETEEIIADVLDVEVFRQTVAGNVLTGSYC 152
Query: 94 SFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTA 153
+ SN+G LVHP TSI++ DELS+LLQVPLVAGT+NRGS+VIGAGL VNDW AF G DTTA
Sbjct: 153 ALSNQGALVHPRTSIQEQDELSSLLQVPLVAGTINRGSDVIGAGLVVNDWCAFAGLDTTA 212
Query: 154 TELSVIESVFKLREAQPNAIVDEMRKSLIDSY 185
TEL+V ES+FKL++AQP+AI+ R +L++SY
Sbjct: 213 TELAVCESIFKLQDAQPSAIISN-RDTLVESY 243
>sp|O22290|IF61_ARATH Eukaryotic translation initiation factor 6-1 OS=Arabidopsis
thaliana GN=EIF6-1 PE=2 SV=1
Length = 247
Score = 227 bits (579), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 106/151 (70%), Positives = 131/151 (86%)
Query: 36 KRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSF 95
+RIEE + ALGN IACND+VAL H L+++TEEII+DVLGVEV+RQTIA N LVGSYCS
Sbjct: 97 QRIEEPICALGNAIACNDYVALVHPKLEKDTEEIISDVLGVEVYRQTIANNELVGSYCSL 156
Query: 96 SNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATE 155
SN GG+VH +T++E++ EL+ L+QVPLVAGTVNRGS+VI AGLTVNDWTAFCGSDTTA E
Sbjct: 157 SNNGGMVHSNTNVEEMVELANLVQVPLVAGTVNRGSQVISAGLTVNDWTAFCGSDTTAVE 216
Query: 156 LSVIESVFKLREAQPNAIVDEMRKSLIDSYV 186
LSV+ ++FKL ++QP+ + EMRKSLID+YV
Sbjct: 217 LSVVNNIFKLVQSQPDFVGSEMRKSLIDTYV 247
>sp|P56538|IF6_DROME Eukaryotic translation initiation factor 6 OS=Drosophila
melanogaster GN=eIF6 PE=2 SV=3
Length = 245
Score = 224 bits (571), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 107/147 (72%), Positives = 125/147 (85%)
Query: 37 RIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFS 96
R+EERLSALGN IACND+VAL H DLD+ETEEIIADVL VEVFRQTIA N LVGSY S
Sbjct: 96 RVEERLSALGNVIACNDYVALVHPDLDKETEEIIADVLKVEVFRQTIADNSLVGSYAVLS 155
Query: 97 NRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATEL 156
N+GG+VHP TSI+D DELS+LLQVPLVAGTVNRGSEV+ AG+ VNDW +F G +TTATE+
Sbjct: 156 NQGGMVHPKTSIQDQDELSSLLQVPLVAGTVNRGSEVLAAGMVVNDWLSFVGMNTTATEI 215
Query: 157 SVIESVFKLREAQPNAIVDEMRKSLID 183
SVIESVFKL +AQP + ++R +LI+
Sbjct: 216 SVIESVFKLNQAQPATVTTKLRAALIE 242
>sp|D1ZG64|IF6_SORMK Eukaryotic translation initiation factor 6 OS=Sordaria macrospora
(strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell)
GN=TIF6 PE=3 SV=2
Length = 246
Score = 219 bits (559), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 108/153 (70%), Positives = 125/153 (81%), Gaps = 1/153 (0%)
Query: 34 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYC 93
+ +RIEERLSALGN I CNDH AL H DL+RETEEIIADVLGVEVFRQTIA N+LVGSY
Sbjct: 93 RIQRIEERLSALGNVIVCNDHTALIHPDLERETEEIIADVLGVEVFRQTIADNVLVGSYM 152
Query: 94 SFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTA 153
S SN+GGLVHP TSI+D DELS+LLQVPLVAG+VNRGS VIG G+ VNDW A G DTTA
Sbjct: 153 SLSNQGGLVHPKTSIQDQDELSSLLQVPLVAGSVNRGSNVIGGGMVVNDWMAVTGLDTTA 212
Query: 154 TELSVIESVFKLRE-AQPNAIVDEMRKSLIDSY 185
ELSVIESVF+L E A P I ++ ++++S+
Sbjct: 213 PELSVIESVFRLGEGAAPGQINSSLKDTMVESF 245
>sp|Q245F2|IF6_TETTS Eukaryotic translation initiation factor 6 OS=Tetrahymena
thermophila (strain SB210) GN=EIF6 PE=1 SV=1
Length = 245
Score = 219 bits (558), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 100/149 (67%), Positives = 124/149 (83%)
Query: 34 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYC 93
+ +RIEE+LSALGNC+ ND+VAL H DLDRE+EEIIAD LGVEVFR TIA N+LVG+YC
Sbjct: 93 RVRRIEEKLSALGNCVVANDYVALIHPDLDRESEEIIADTLGVEVFRTTIANNVLVGTYC 152
Query: 94 SFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTA 153
+NRGGLVHP S+E+LDEL+ LLQ+PL AGT+NRGS+VIGAGL VNDW AFCG DTT+
Sbjct: 153 VINNRGGLVHPLASVEELDELANLLQIPLCAGTINRGSDVIGAGLVVNDWAAFCGLDTTS 212
Query: 154 TELSVIESVFKLREAQPNAIVDEMRKSLI 182
TE+SV+E++FKL E + + +EMRK +
Sbjct: 213 TEISVVENIFKLNEMKDENMDNEMRKDFV 241
>sp|C9SV08|IF6_VERA1 Eukaryotic translation initiation factor 6 OS=Verticillium
albo-atrum (strain VaMs.102 / ATCC MYA-4576 / FGSC
10136) GN=TIF6 PE=3 SV=2
Length = 246
Score = 219 bits (557), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 107/151 (70%), Positives = 126/151 (83%), Gaps = 1/151 (0%)
Query: 36 KRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSF 95
+RIEERLSALGN I NDH+AL H D++RETEEIIADVLGVEVFRQTIA N+LVGSY S
Sbjct: 95 QRIEERLSALGNVIVTNDHIALVHPDIERETEEIIADVLGVEVFRQTIADNVLVGSYMSL 154
Query: 96 SNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATE 155
SN+GGLVHP TSI+D DELS+LLQVPLVAG+VNRGS V+GAG+ VNDW A G DTTATE
Sbjct: 155 SNQGGLVHPKTSIQDQDELSSLLQVPLVAGSVNRGSNVVGAGMVVNDWMAVTGLDTTATE 214
Query: 156 LSVIESVFKLREA-QPNAIVDEMRKSLIDSY 185
LSVIESVF+L E P+ I M+ ++++S+
Sbjct: 215 LSVIESVFRLGEGLGPSNINTGMKDTMVESF 245
>sp|Q7S2W6|IF6_NEUCR Eukaryotic translation initiation factor 6 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=tif-6 PE=3 SV=1
Length = 246
Score = 218 bits (556), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/153 (69%), Positives = 125/153 (81%), Gaps = 1/153 (0%)
Query: 34 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYC 93
+ +RIEERLSALGN I CNDH AL H DL+RETEEIIADVLGVEVFRQTIA N+LVGSY
Sbjct: 93 RIQRIEERLSALGNVIVCNDHTALIHPDLERETEEIIADVLGVEVFRQTIADNVLVGSYM 152
Query: 94 SFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTA 153
+ SN+GGLVHP TSI+D DELS+LLQVPLVAG+VNRGS VIG G+ VNDW A G DTTA
Sbjct: 153 ALSNQGGLVHPKTSIQDQDELSSLLQVPLVAGSVNRGSNVIGGGMVVNDWMAVTGLDTTA 212
Query: 154 TELSVIESVFKLRE-AQPNAIVDEMRKSLIDSY 185
ELSVIESVF+L E A P I ++ ++++S+
Sbjct: 213 PELSVIESVFRLGEGAAPGQINSSLKDTMVESF 245
>sp|Q5ASA6|IF6_EMENI Eukaryotic translation initiation factor 6 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=tif6 PE=3 SV=1
Length = 247
Score = 216 bits (549), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/154 (70%), Positives = 125/154 (81%), Gaps = 2/154 (1%)
Query: 34 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYC 93
+ +RIEERLSALGN I CNDHVAL H DL+RETEEIIADVLGVEVFRQTIA N+L GSY
Sbjct: 93 KIQRIEERLSALGNVICCNDHVALIHPDLERETEEIIADVLGVEVFRQTIADNVLTGSYM 152
Query: 94 SFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTA 153
+ SN+GG+VHP TSI D DELS+LLQVPLVAG+VNRGS V+GAGL VNDW A G DTTA
Sbjct: 153 ALSNQGGIVHPKTSIRDQDELSSLLQVPLVAGSVNRGSPVVGAGLVVNDWLAVTGLDTTA 212
Query: 154 TELSVIESVFKLREAQPNAIVDEM--RKSLIDSY 185
TELSVIESVF+L E P I + + S+++S+
Sbjct: 213 TELSVIESVFRLGENGPGGIGQGVANKDSIVESF 246
>sp|Q2UTN7|IF6_ASPOR Eukaryotic translation initiation factor 6 OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=tif6 PE=3 SV=2
Length = 247
Score = 215 bits (547), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/154 (68%), Positives = 125/154 (81%), Gaps = 2/154 (1%)
Query: 34 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYC 93
+ +RIEERLSALGN I CNDHVAL H DL+RETEEIIADVLGVEVFRQTIA N+L GSY
Sbjct: 93 KIQRIEERLSALGNVICCNDHVALIHPDLERETEEIIADVLGVEVFRQTIADNVLTGSYM 152
Query: 94 SFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTA 153
+ SN+GG+VHP TSI D DELS+LLQVPLVAG+VNRGS V+GAG+ VNDW A G DTTA
Sbjct: 153 ALSNQGGIVHPKTSIRDQDELSSLLQVPLVAGSVNRGSAVVGAGMVVNDWLAVTGLDTTA 212
Query: 154 TELSVIESVFKLREAQPNAI--VDEMRKSLIDSY 185
TELSVIESVF+L E P + ++S+++S+
Sbjct: 213 TELSVIESVFRLGEMGPRGVGMGSTNKESIVESF 246
>sp|Q551M2|IF6_DICDI Eukaryotic translation initiation factor 6 OS=Dictyostelium
discoideum GN=eif6 PE=3 SV=1
Length = 244
Score = 212 bits (539), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 98/135 (72%), Positives = 118/135 (87%)
Query: 36 KRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSF 95
+RIEE+ SALGNCIA ND+VAL H D+DRETEEIIADVLGVEVFRQT++GN+LVG+YC+
Sbjct: 95 QRIEEKFSALGNCIATNDYVALVHPDIDRETEEIIADVLGVEVFRQTVSGNVLVGTYCAL 154
Query: 96 SNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATE 155
+N+G LVHP TSI D DELS+LLQVPLVAGTVNRG+E + AG VNDWTA G+DTTATE
Sbjct: 155 TNQGALVHPMTSIADQDELSSLLQVPLVAGTVNRGNECVAAGCVVNDWTAIVGADTTATE 214
Query: 156 LSVIESVFKLREAQP 170
+SVIES+F L+ ++P
Sbjct: 215 ISVIESIFALQGSKP 229
>sp|B8MDN4|IF6_TALSN Eukaryotic translation initiation factor 6 OS=Talaromyces
stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 /
NRRL 1006) GN=tif6 PE=3 SV=1
Length = 247
Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 103/154 (66%), Positives = 127/154 (82%), Gaps = 2/154 (1%)
Query: 34 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYC 93
+ +R+EERLSALGN I CNDHVAL H DL+RETEEIIADVLGVEVFRQT+A N+L GSY
Sbjct: 93 KIQRVEERLSALGNVICCNDHVALIHPDLERETEEIIADVLGVEVFRQTVADNVLTGSYM 152
Query: 94 SFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTA 153
+ SN+GG+VHP TSI D DELS+LLQVPLVAG+VNRGS V+GAG+ VNDW A G DTTA
Sbjct: 153 ALSNQGGIVHPKTSIRDQDELSSLLQVPLVAGSVNRGSPVVGAGMVVNDWLAVTGLDTTA 212
Query: 154 TELSVIESVFKLRE--AQPNAIVDEMRKSLIDSY 185
TELSV+ESVF+L E A+ + + ++S+++S+
Sbjct: 213 TELSVMESVFRLGEMGAKGLGMGNANKESIVESF 246
>sp|B9PVB9|IF6_TOXGO Eukaryotic translation initiation factor 6 OS=Toxoplasma gondii
GN=EIF6 PE=3 SV=2
Length = 249
Score = 208 bits (530), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/155 (64%), Positives = 124/155 (80%), Gaps = 4/155 (2%)
Query: 34 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYC 93
+ +R+EERLSALGN +ACND+VAL HTD+D+ETEEI+ DVLGVE FR TI LVGSYC
Sbjct: 93 EIRRVEERLSALGNNVACNDYVALLHTDMDKETEEIVQDVLGVEAFRATIGKQTLVGSYC 152
Query: 94 SFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTA 153
F+N+GGLVH T +ED++ELS LLQVPL AGTVNRGS+++GAGL NDW AFCG DTTA
Sbjct: 153 HFTNQGGLVHVMTPVEDMEELSQLLQVPLTAGTVNRGSDLVGAGLIANDWAAFCGMDTTA 212
Query: 154 TELSVIESVFKL--REAQPNAIVDE--MRKSLIDS 184
TEL+V+E +FK+ R Q +VD+ +R SLID+
Sbjct: 213 TELAVVERIFKIATRNQQKLNLVDDLTLRSSLIDT 247
>sp|A7ANL7|IF6_BABBO Eukaryotic translation initiation factor 6 OS=Babesia bovis GN=EIF6
PE=3 SV=2
Length = 249
Score = 196 bits (499), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 91/157 (57%), Positives = 122/157 (77%), Gaps = 4/157 (2%)
Query: 34 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYC 93
+ +RI++RLSALGN I CND+V L H D+DRETEEI+ DVLG+EVFR +IAGN+L+GSYC
Sbjct: 93 EIRRIDDRLSALGNVITCNDYVGLIHVDIDRETEEIVEDVLGIEVFRASIAGNVLIGSYC 152
Query: 94 SFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTA 153
F N+GGLVH T+ ++++ELS LLQ+PL +GTVNRGS+VIG GL NDW AFCG TTA
Sbjct: 153 RFQNKGGLVHVKTTTDEMEELSQLLQIPLTSGTVNRGSDVIGGGLIANDWVAFCGMSTTA 212
Query: 154 TELSVIESVFKL---REAQPN-AIVDEMRKSLIDSYV 186
TE++ IE +F+L +E P+ + +R +LID+ +
Sbjct: 213 TEIATIERIFQLSRPKEFDPSVSNSHTLRNALIDTLI 249
>sp|Q4E097|IF61_TRYCC Eukaryotic translation initiation factor 6 OS=Trypanosoma cruzi
(strain CL Brener) GN=EIF6 PE=3 SV=2
Length = 248
Score = 193 bits (490), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 88/154 (57%), Positives = 121/154 (78%), Gaps = 5/154 (3%)
Query: 34 QTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYC 93
+ +R+EERL+ALGNC+ CNDHVAL HTDL RETEEI+ D L V+ FR +IA N LVGSY
Sbjct: 93 KVQRVEERLNALGNCVVCNDHVALIHTDLSRETEEILRDTLQVQTFRTSIAENALVGSYA 152
Query: 94 SFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTA 153
+N+G +VHP T +D+DE+++LLQVP+VAGT+NRG+ IG+GL VNDW AFCG +TTA
Sbjct: 153 VVNNKGCMVHPKTPAQDMDEIASLLQVPVVAGTINRGNAAIGSGLVVNDWAAFCGLNTTA 212
Query: 154 TELSVIESVFKLRE----AQPNAIVDEMRKSLID 183
TE++V+E +F+LR +PN ++ ++R +L+D
Sbjct: 213 TEITVVERIFQLRRDLGGDEPN-LLQQLRDTLVD 245
>sp|B0EMY3|IF6_ENTDS Eukaryotic translation initiation factor 6 OS=Entamoeba dispar
(strain ATCC PRA-260 / SAW760) GN=EIF6 PE=3 SV=2
Length = 239
Score = 189 bits (480), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 83/131 (63%), Positives = 110/131 (83%)
Query: 36 KRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSF 95
+R+EER+SALGNCIACND+VAL H ++DRETEEIIADVLGVEVFR + GN LVG+Y
Sbjct: 94 QRVEERMSALGNCIACNDYVALVHPEIDRETEEIIADVLGVEVFRHAVGGNPLVGTYSVI 153
Query: 96 SNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATE 155
+N+G ++ P+T+ ++ +E+ T+LQVPLVAGTVNRGS ++G+G+ VNDW F G DTTATE
Sbjct: 154 TNKGAMLAPNTTQQEQEEIGTILQVPLVAGTVNRGSNLLGSGMIVNDWCGFVGMDTTATE 213
Query: 156 LSVIESVFKLR 166
LS++E ++KLR
Sbjct: 214 LSIVEGIYKLR 224
>sp|O81920|IF6_BETVU Eukaryotic translation initiation factor 6 (Fragment) OS=Beta
vulgaris PE=2 SV=1
Length = 193
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/99 (88%), Positives = 96/99 (96%)
Query: 36 KRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSF 95
+RIEE+LSALGNCIACND+VAL HTDLD+ETEE+IADVLGVEVF QTIAGNILVGSYC+
Sbjct: 95 QRIEEKLSALGNCIACNDYVALTHTDLDKETEELIADVLGVEVFGQTIAGNILVGSYCAI 154
Query: 96 SNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVI 134
+N+GGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVI
Sbjct: 155 TNKGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVI 193
Score = 31.2 bits (69), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 76 VEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSI-EDLDELSTLLQVPLVAGTVNRGSEVI 134
+ V + +IAG ++G N+ GL+ PHT+ ++L L L +V + +
Sbjct: 46 IPVVKTSIAGTRIIGPNVC-RNKNGLLVPHTTTDQELQHLRNCLPDSVVVQRIEEKLSAL 104
Query: 135 GAGLTVNDWTAFCGSD 150
G + ND+ A +D
Sbjct: 105 GNCIACNDYVALTHTD 120
>sp|O62106|IF6_CAEEL Eukaryotic translation initiation factor 6 OS=Caenorhabditis
elegans GN=eif-6 PE=3 SV=1
Length = 246
Score = 180 bits (457), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 87/150 (58%), Positives = 115/150 (76%), Gaps = 1/150 (0%)
Query: 36 KRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSF 95
+R++ERLSALGN IACNDHVA+ H ++ ETE+ + +VL VEVFR ++A N LVGSYC
Sbjct: 95 RRVDERLSALGNVIACNDHVAIVHAEISAETEQALVEVLKVEVFRVSLAQNSLVGSYCIL 154
Query: 96 SNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATE 155
S+ G LV T E E++ LLQ+P+VAGT NRGSE+IGAG+ VNDW AFCG D+T+TE
Sbjct: 155 SSNGCLVAARTPPETQREIAALLQIPVVAGTCNRGSELIGAGMVVNDWVAFCGLDSTSTE 214
Query: 156 LSVIESVFKLRE-AQPNAIVDEMRKSLIDS 184
LSV+ES+FKL E P +I +++R +LI+S
Sbjct: 215 LSVVESIFKLGEQGAPTSISNQLRDTLIES 244
>sp|Q8SS47|IF6_ENCCU Eukaryotic translation initiation factor 6 OS=Encephalitozoon
cuniculi (strain GB-M1) GN=TIF6 PE=3 SV=2
Length = 241
Score = 150 bits (379), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/145 (53%), Positives = 100/145 (68%), Gaps = 5/145 (3%)
Query: 36 KRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSF 95
+RIEERL+ALGN I CNDH+A+ H DLD+E+E++I DVL V V+RQ I LVG++ +
Sbjct: 93 RRIEERLNALGNVILCNDHIAIIHGDLDKESEDLIRDVLQVHVYRQNIGQEPLVGTFGAL 152
Query: 96 SNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATE 155
+N+G LVHP TS E ELS LL+V +VAGT+N GS+ +G G+ NDW G TT E
Sbjct: 153 NNQGMLVHPFTSTECQKELSELLEVNVVAGTINGGSQCVGGGVVANDWMCIAGIKTTNVE 212
Query: 156 LSVIESVFKLR-----EAQPNAIVD 175
++VIE VF L EA+ AIVD
Sbjct: 213 MAVIEGVFDLTGDQDLEARRRAIVD 237
>sp|Q9XYP3|IF6_TRYCR Eukaryotic translation initiation factor 6 (Fragment)
OS=Trypanosoma cruzi PE=3 SV=1
Length = 114
Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 83/109 (76%), Gaps = 5/109 (4%)
Query: 79 FRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGL 138
FR +IA N LVGSY +N+G +VHP T +D+DE+++LLQVP+VAGT+NRG+ IG+GL
Sbjct: 4 FRTSIAENALVGSYAVVNNKGCMVHPKTPAQDMDEIASLLQVPVVAGTINRGNAAIGSGL 63
Query: 139 TVNDWTAFCGSDTTATELSVIESVFKLRE----AQPNAIVDEMRKSLID 183
VNDW AFCG +TTATE++V+E +F+LR + N ++ ++R +L+D
Sbjct: 64 VVNDWAAFCGLNTTATEITVVERIFQLRRDLGGGRAN-LLQQLRDTLVD 111
>sp|Q98RM8|IF6_GUITH Eukaryotic translation initiation factor 6 OS=Guillardia theta
GN=EIF6 PE=3 SV=1
Length = 228
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 79/129 (61%)
Query: 36 KRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSF 95
K+ E L+ LGN +A N+ L+ DL + + E+I+DVLGVE+ + T+ ++G+YC F
Sbjct: 95 KKFNENLTNLGNLLAHNELYGLSSPDLSQSSCELISDVLGVEILKLTLGEEKMIGTYCKF 154
Query: 96 SNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATE 155
+ GG+V P SIED DEL + VP + GTVN G +G G+ ND FCG T TE
Sbjct: 155 NINGGIVQPFLSIEDHDELVEITGVPFIGGTVNSGCSNVGKGIVCNDNLVFCGYKTNQTE 214
Query: 156 LSVIESVFK 164
+ +I ++ K
Sbjct: 215 MHIINNIMK 223
>sp|Q9YD27|IF6_AERPE Translation initiation factor 6 OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=eif6 PE=3 SV=1
Length = 233
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 73/123 (59%)
Query: 38 IEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSN 97
+ R +ALGN I CND LA L++E + ++D LGVEV ++AG VGS +N
Sbjct: 103 VPTRSNALGNVIVCNDRACLASPGLEKEALKTVSDTLGVEVVEGSVAGVYTVGSAIVVTN 162
Query: 98 RGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELS 157
RGGL HP S E+L LS + +VP AGT+N G E + GL N + A G DTT E++
Sbjct: 163 RGGLAHPDASEEELKFLSDVFKVPFEAGTINFGVEFVRTGLVANSYGALVGEDTTGPEIA 222
Query: 158 VIE 160
I+
Sbjct: 223 RIQ 225
>sp|Q2NGQ7|IF6_METST Translation initiation factor 6 OS=Methanosphaera stadtmanae
(strain DSM 3091) GN=eif6 PE=3 SV=1
Length = 224
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 79/132 (59%)
Query: 38 IEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSN 97
+ ++L+A+GN I ND+ AL + L E + II + L VEV +IAG +VGS + +N
Sbjct: 92 MPDKLTAIGNIIVANDNGALVNPSLSDEAKRIIKNTLEVEVVETSIAGLDIVGSLVAATN 151
Query: 98 RGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELS 157
RG LVHP S E+LD + +L VP GTVNRG +++GA + N G+ TT EL+
Sbjct: 152 RGALVHPDASEEELDLVEDVLGVPAEIGTVNRGVKLVGACIIANSNGVIVGNKTTGPELA 211
Query: 158 VIESVFKLREAQ 169
I+ VF L E
Sbjct: 212 RIDQVFNLFEGS 223
>sp|Q46FA1|IF6_METBF Translation initiation factor 6 OS=Methanosarcina barkeri (strain
Fusaro / DSM 804) GN=eif6 PE=3 SV=1
Length = 219
Score = 96.7 bits (239), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 73/127 (57%)
Query: 41 RLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGG 100
+L+A+GN + ND AL H +L + E+IA L VEV+R TIAG VG +N+G
Sbjct: 93 KLNAVGNIVLANDSAALVHPELSDKAIEVIASTLKVEVYRGTIAGIKNVGMAGVVTNKGL 152
Query: 101 LVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIE 160
LVHP + +++ L L ++P+ GT N G++++G+GL N GSDTT EL IE
Sbjct: 153 LVHPKVTASEIETLEKLFELPVNIGTTNFGTQMLGSGLLANSKNYLAGSDTTGPELGRIE 212
Query: 161 SVFKLRE 167
E
Sbjct: 213 EALGFLE 219
>sp|Q8TUY5|IF6_METKA Translation initiation factor 6 OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=eif6 PE=3
SV=1
Length = 221
Score = 96.7 bits (239), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 79/145 (54%), Gaps = 6/145 (4%)
Query: 21 LVTKMGFSCHTQPQTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFR 80
+V ++G P +++A+GN + NDH AL H DLD E+I VLG V R
Sbjct: 82 VVRELGVEVDVLPS------KMNAVGNLVLTNDHGALVHPDLDDHALEVIESVLGGRVVR 135
Query: 81 QTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTV 140
+ G VGS +++G +VHP + E+++ +S +L V + GTVNRGS +G G+ V
Sbjct: 136 GELGGVKTVGSAGVANSKGAVVHPGATEEEMERVSEVLGVDVEVGTVNRGSPYVGVGIVV 195
Query: 141 NDWTAFCGSDTTATELSVIESVFKL 165
N A G DTT EL+ +E L
Sbjct: 196 NSKGAVVGEDTTGPELARLEDALYL 220
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 45 LGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHP 104
+G IA ++ A+ + + E + + L VEV R T+AG+ LVG+ + ++ G L
Sbjct: 14 IGAWIAASEEYAVVAPKVPDDIVERVKEALDVEVVRTTVAGSNLVGALLAVNSNGALFPR 73
Query: 105 HTSIEDLDELSTL-LQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVF 163
H ++ + L ++V ++ +N +G + ND A D L VIESV
Sbjct: 74 HAREHEIRVVRELGVEVDVLPSKMN----AVGNLVLTNDHGALVHPDLDDHALEVIESVL 129
Query: 164 KLR 166
R
Sbjct: 130 GGR 132
>sp|Q8PYQ3|IF6_METMA Translation initiation factor 6 OS=Methanosarcina mazei (strain
ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM
88) GN=eif6 PE=3 SV=1
Length = 219
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 14 GLSGGFVLVTKMGFSCHTQPQTKR-------IEERLSALGNCIACNDHVALAHTDLDRET 66
G S GF+L + + KR + +RL+A+GN + ND AL H +L
Sbjct: 63 GNSNGFLLP----YGSSVEEMQKRTGVPAGILPDRLNAVGNIVLANDSAALVHPELSDRA 118
Query: 67 EEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGT 126
EIIA L VEV+R TIAG VG +N+G LVHP ++ + + L + +P+ GT
Sbjct: 119 LEIIARTLKVEVYRGTIAGIKNVGMAGVVTNKGLLVHPKVTVSEREALEEIFGLPVNIGT 178
Query: 127 VNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLRE 167
N G++++G+GL N GS+TT EL IE E
Sbjct: 179 TNFGTQMLGSGLLANSKNFVAGSETTGPELGRIEEALGFLE 219
>sp|Q8ZTU1|IF6_PYRAE Translation initiation factor 6 OS=Pyrobaculum aerophilum (strain
ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=eif6 PE=3 SV=1
Length = 220
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 71/126 (56%)
Query: 38 IEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSN 97
I + +A+ N I + VAL L+ +++ADVLGVEV TIAGN LVG+ ++
Sbjct: 94 INTKYTAISNLILAGNKVALVSPLLEPSARKVVADVLGVEVIVDTIAGNPLVGALAVLNS 153
Query: 98 RGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELS 157
RG LV P + +DL +LS +V + GTVNRG + G+ VND A G +T EL
Sbjct: 154 RGLLVAPEATDDDLKKLSEYFKVRVDVGTVNRGKSFLRGGIVVNDNGALVGDETAGPELM 213
Query: 158 VIESVF 163
++ V
Sbjct: 214 RMQQVL 219
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 33/62 (53%)
Query: 43 SALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLV 102
S++G IA N+ V D+ + ++ + + L V R T+A + L+G + ++ G L+
Sbjct: 13 SSIGVFIATNNTVTFIPPDVPEKIDDAVRNTLRTSVARFTVARSPLLGIFTVVNDNGVLL 72
Query: 103 HP 104
P
Sbjct: 73 PP 74
>sp|Q8U3S8|IF6_PYRFU Translation initiation factor 6 OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=eif6 PE=3 SV=1
Length = 227
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 68/120 (56%)
Query: 41 RLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGG 100
+ +ALGN I ND AL + RE + I D+LGVEV R IAG + VGS +N+GG
Sbjct: 102 KYTALGNLILTNDKGALVSSKFSREEAKKIGDILGVEVERGVIAGIVAVGSAGVVTNKGG 161
Query: 101 LVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIE 160
LVHP + E+L+ LS L +V + GT N G +G+ + N + G TT E+ IE
Sbjct: 162 LVHPEATDEELEWLSDLFKVDVYVGTANMGVPYVGSCMLANSYGVVVGHLTTGPEIVKIE 221
>sp|Q12ZJ5|IF6_METBU Translation initiation factor 6 OS=Methanococcoides burtonii
(strain DSM 6242) GN=eif6 PE=3 SV=1
Length = 217
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 72/123 (58%)
Query: 38 IEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSN 97
+ + L+A+GN I ND AL H ++ + E+I+ VLGV+V R TIAG VG +N
Sbjct: 89 LPDMLTAVGNVILANDTAALVHPEMTDSSIEVISRVLGVDVHRGTIAGLGTVGMAGVVTN 148
Query: 98 RGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELS 157
RG LVHP + ++L L + +P+ GT N GS+ +G+GL N GS+TT EL
Sbjct: 149 RGLLVHPMVTPDELSVLEDVFALPIELGTTNYGSQAVGSGLLANSKGYVAGSNTTGHELG 208
Query: 158 VIE 160
+E
Sbjct: 209 RVE 211
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Query: 45 LGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHP 104
LG C + VA+ + +++A+ L V+V I G+I+VGS ++ G L+
Sbjct: 13 LGVFATCTEDVAIVPIGTAGKAIDLLAEQLDVKVISTLINGSIVVGSLSKGNSNGFLISR 72
Query: 105 HTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVF 163
++ DL ++ ++V + +G + ND A + T + + VI V
Sbjct: 73 DANVSDLKDVEVPVEV------LPDMLTAVGNVILANDTAALVHPEMTDSSIEVISRVL 125
>sp|Q8TIN4|IF6_METAC Translation initiation factor 6 OS=Methanosarcina acetivorans
(strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=eif6
PE=3 SV=1
Length = 218
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 71/130 (54%)
Query: 38 IEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSN 97
+ +RL+A+GN + ND AL H DL + E IA L V+V+R TIAG VG +N
Sbjct: 89 LPDRLNAVGNIVFANDSAALVHPDLSDKALEAIARTLKVDVYRGTIAGIKNVGMAGVVTN 148
Query: 98 RGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELS 157
+G LVHP + + + L + P+ GT N G++++G+GL N GS+TT EL
Sbjct: 149 KGLLVHPKVTASEREVLEKIFGFPVNIGTTNFGTQMLGSGLLANSKNFVAGSETTGPELG 208
Query: 158 VIESVFKLRE 167
IE E
Sbjct: 209 RIEEALGFLE 218
>sp|C5A7H2|IF6_THEGJ Translation initiation factor 6 OS=Thermococcus gammatolerans
(strain DSM 15229 / JCM 11827 / EJ3) GN=eif6 PE=3 SV=1
Length = 228
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 65/122 (53%)
Query: 39 EERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNR 98
+ RL+A GN I ND AL D RE I D+LGV V R IA VGS +N+
Sbjct: 100 QSRLTAFGNLILANDKGALVSKDFTREEARKIEDILGVPVERGVIADYTAVGSVGVVTNK 159
Query: 99 GGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSV 158
GGLVHP + E+L+ LS L +V + GT N G +G+ + N + G TT E+
Sbjct: 160 GGLVHPEATDEELEWLSDLFKVDVYVGTANMGVPFVGSCMIANSYGVVVGHLTTGPEIVK 219
Query: 159 IE 160
IE
Sbjct: 220 IE 221
>sp|A7I9I6|IF6_METB6 Translation initiation factor 6 OS=Methanoregula boonei (strain
6A8) GN=eif6 PE=3 SV=1
Length = 220
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 68/128 (53%)
Query: 40 ERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRG 99
E ++A GN I ND A H DL E E I LGVEV T+ G G +N+G
Sbjct: 93 ETMNAAGNVIMANDTFAAVHPDLPAEVAEEIGAFLGVEVIHLTLGGVRTTGMAGVATNKG 152
Query: 100 GLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVI 159
+VHP + +++ L T+ +P+ GT+N GS ++G GL VND G+ T+ EL +
Sbjct: 153 VIVHPRATAQEIARLETVSGIPVGTGTINMGSGLVGTGLLVNDTGYLAGNATSGFELGRV 212
Query: 160 ESVFKLRE 167
E VF E
Sbjct: 213 EDVFGFLE 220
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 54 HVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDE 113
++A+ + E I + LGVE+ TI G+ ++GS + ++RG +V + E+L
Sbjct: 22 NIAVIPPEAPEEFRNAIREGLGVELLVTTIQGSAIIGSLVAGNSRGLVVSGLATDEELAV 81
Query: 114 LSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTA 153
L +V L+ T+N VI A ND A D A
Sbjct: 82 LKKHRKVMLLCETMNAAGNVIMA----NDTFAAVHPDLPA 117
>sp|A4WL95|IF6_PYRAR Translation initiation factor 6 OS=Pyrobaculum arsenaticum (strain
DSM 13514 / JCM 11321) GN=eif6 PE=3 SV=1
Length = 220
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 67/123 (54%)
Query: 41 RLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGG 100
+ +A+ N I + VAL L+ +++ADVLGVEV TIAGN LVGS ++RG
Sbjct: 97 KYTAISNLILAGNKVALVSPLLEPSVRKVVADVLGVEVIVDTIAGNPLVGSLAVLNSRGV 156
Query: 101 LVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIE 160
LV P + EDL +L+ + GTVN+G + G+ VND A G +T E I+
Sbjct: 157 LVAPEATDEDLKKLAEYFKAKTDLGTVNKGKSFLRGGIVVNDHGALVGDETAGPEFMRIQ 216
Query: 161 SVF 163
V
Sbjct: 217 QVL 219
Score = 34.3 bits (77), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 37/69 (53%)
Query: 43 SALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLV 102
S++G +A N+ V D+ + ++I+ + L V R T+A + L+G + ++ G L+
Sbjct: 13 SSIGVFLATNNSVTFLPPDVPEKIDDIVRNTLRTTVARLTVAKSPLLGIFTVVNDNGVLL 72
Query: 103 HPHTSIEDL 111
P E++
Sbjct: 73 PPMVLEEEI 81
>sp|Q9HM16|IF6_THEAC Translation initiation factor 6 OS=Thermoplasma acidophilum (strain
ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 /
AMRC-C165) GN=eif6 PE=3 SV=2
Length = 216
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 74/128 (57%), Gaps = 2/128 (1%)
Query: 37 RIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNIL-VGSYCSF 95
+++++++A+GN I NDH A+ H + + + I D LGVE R TI GNIL VGS
Sbjct: 89 QLKDKINAIGNDIIANDHGAIIHKNFSNRSRKEIEDTLGVETIRTTI-GNILTVGSAGIL 147
Query: 96 SNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATE 155
+++G LV+P T ++L+ L +V + +GT N GS +GA + N G DTT E
Sbjct: 148 TSKGMLVNPETDDDELEFLRDFFKVSVKSGTANFGSIYVGASIVANSKGVLVGKDTTPIE 207
Query: 156 LSVIESVF 163
+ I+ V
Sbjct: 208 MDRIDDVL 215
>sp|A2BN57|IF6_HYPBU Translation initiation factor 6 OS=Hyperthermus butylicus (strain
DSM 5456 / JCM 9403) GN=eif6 PE=3 SV=1
Length = 225
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
Query: 38 IEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNI-LVGSYCSFS 96
+E R +ALGN IA N+ AL +D+ + I VLGVE Q NI VGS +
Sbjct: 95 LEVRQTALGNLIAANNRGALVSPLIDKAILDKIKSVLGVETIYQRHLANIPTVGSMIVVT 154
Query: 97 NRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATEL 156
NRGG+VHP S +++ L+++ V TVN G + AGL ND A G +TT EL
Sbjct: 155 NRGGVVHPGVSDDEIRILNSVFGVEFTTATVNFGLYFVKAGLVANDHGALVGDETTGPEL 214
Query: 157 SVIESVFKLR 166
I+ +LR
Sbjct: 215 MRIQQALRLR 224
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 45 LGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHP 104
+G I N+ +AL L + ++ I + LGVEV IA I+ G + ++ G L+
Sbjct: 13 IGVYIYANNKIALVPPTLTEKDKKKIEETLGVEVIETKIADMIINGVMIAGNDNGLLLPR 72
Query: 105 HTSIEDLDEL 114
E+LD L
Sbjct: 73 IVKPEELDYL 82
>sp|O58264|IF6_PYRHO Translation initiation factor 6 OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=eif6 PE=3 SV=1
Length = 227
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 65/120 (54%)
Query: 41 RLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGG 100
+ +ALGN I ND AL R+ + I ++LGVEV R IAG VGS +N+GG
Sbjct: 102 KYTALGNLILTNDKAALVSAKFSRKEAQEIGEILGVEVERGVIAGLHAVGSAGVVTNKGG 161
Query: 101 LVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIE 160
LVHP TS E+L+ LS L +V + GT N G +G + N G TT E+ IE
Sbjct: 162 LVHPETSDEELEWLSDLFKVDVYVGTANMGVPYVGTCMLANSNGVVVGHLTTGPEIVKIE 221
>sp|Q9UYI6|IF6_PYRAB Translation initiation factor 6 OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=eif6 PE=3 SV=1
Length = 227
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 65/125 (52%)
Query: 41 RLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGG 100
+ +ALGN I ND AL R+ + I D+LGVEV R IAG VGS +N+GG
Sbjct: 102 KYTALGNLILTNDKAALVSAKFSRDEAKEIGDILGVEVERGLIAGLHAVGSAGVVTNKGG 161
Query: 101 LVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIE 160
LVHP S E+L+ LS L +V + GT N G +G + N G TT E+ IE
Sbjct: 162 LVHPEASDEELEWLSELFKVDVYVGTANMGVPYVGTCMLANSNGVVVGHLTTGPEIVKIE 221
Query: 161 SVFKL 165
L
Sbjct: 222 EALGL 226
>sp|B8GEU6|IF6_METPE Translation initiation factor 6 OS=Methanosphaerula palustris
(strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=eif6 PE=3
SV=1
Length = 221
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 69/131 (52%)
Query: 38 IEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSN 97
+E ++A GN I ND +A H D+D T E I VLGV V R T++G VG +N
Sbjct: 91 LEGSMNAAGNVILANDQMAAVHPDMDNATIEQIHSVLGVPVIRLTLSGIKTVGMAGYATN 150
Query: 98 RGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELS 157
RG LVH ++ +L L + +P+ GT+N GS ++G GL N G +T+ E+
Sbjct: 151 RGILVHARSAGRELATLESTTDLPVGTGTINMGSGLVGTGLLANSTGYLAGIETSGFEMG 210
Query: 158 VIESVFKLREA 168
I VF E
Sbjct: 211 RIADVFGFVEG 221
Score = 31.2 bits (69), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 70 IADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNR 129
+ + LGV + + + G+ ++GS S ++RG +V +++ + +V L+ G++N
Sbjct: 38 LKEALGVTLVKTHVQGSSIIGSLVSGNSRGAIVSGLAYPDEIRAIEEYREVMLLEGSMNA 97
Query: 130 GSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKL 165
VI A ND A D + I SV +
Sbjct: 98 AGNVILA----NDQMAAVHPDMDNATIEQIHSVLGV 129
>sp|A0RYC3|IF6_CENSY Translation initiation factor 6 OS=Cenarchaeum symbiosum (strain A)
GN=eif6 PE=3 SV=1
Length = 221
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 72/137 (52%)
Query: 27 FSCHTQPQTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGN 86
+ HT ++ + +ALGN I+ ND + RE IIAD LG+EV ++ IAG
Sbjct: 83 YKKHTDLNVVVLDTKFTALGNMISVNDRGGVVSPVFPREEVRIIADALGIEVIQRRIAGY 142
Query: 87 ILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAF 146
VG+ ++ GG++HP T ED+ +S ++ V + T+N G + +GL N +
Sbjct: 143 NQVGAMMVATSGGGIIHPETDGEDVKRISEVMGVHMEPATINGGIPFVSSGLLANKKSVV 202
Query: 147 CGSDTTATELSVIESVF 163
GS T+ E+ ++ F
Sbjct: 203 AGSFTSGPEIMMLTRAF 219
>sp|O27648|IF6_METTH Translation initiation factor 6 OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=eif6 PE=3 SV=1
Length = 222
Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 84/176 (47%), Gaps = 13/176 (7%)
Query: 5 LLKHQLVATGLSGGFVLVTKMGFSCHTQPQTK-------------RIEERLSALGNCIAC 51
+LK + + L+G + GF Q + RI ER +A+GN +
Sbjct: 46 VLKVSISGSSLNGALAVGNSNGFVVSNQAMDREIDALAAAGVEAVRIPERFTAVGNLVLA 105
Query: 52 NDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDL 111
ND+ A+A L + ++I DVL V+V T+AG +VGS + +NRG L++P S E++
Sbjct: 106 NDNGAVASPLLSDDALQVIGDVLEVDVKVSTLAGLNIVGSMGAATNRGALLNPQASSEEI 165
Query: 112 DELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLRE 167
+ L V GTVN G +IGA N G +TT EL+ IE E
Sbjct: 166 GIIEDTLGVEADVGTVNHGVTLIGACSVANSNGVLVGEETTGPELARIEEALGFLE 221
Score = 30.0 bits (66), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 45 LGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHP 104
LG I+ D VAL + + E ++ + L VEV + +I+G+ L G+ ++ G +V
Sbjct: 13 LGVYISVTDSVALIPQNTPEKFEGVLREALEVEVLKVSISGSSLNGALAVGNSNGFVVSN 72
Query: 105 HTSIEDLDELS 115
++D L+
Sbjct: 73 QAMDREIDALA 83
>sp|Q5JGT4|IF6_PYRKO Translation initiation factor 6 OS=Pyrococcus kodakaraensis (strain
ATCC BAA-918 / JCM 12380 / KOD1) GN=eif6 PE=3 SV=1
Length = 229
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 39 EERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGV-EVFRQTIAGNILVGSYCSFSN 97
+ RL+ALGN I ND AL + RE I ++LGV EV R IA VGS +N
Sbjct: 100 KSRLTALGNLILTNDKAALVSKEFTREEANAIGEILGVDEVERGMIASYRSVGSVGVVTN 159
Query: 98 RGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELS 157
+GGLVHP + E+L+ LS L V + GT N G +G+ + N + G TT E+
Sbjct: 160 KGGLVHPEATDEELEWLSDLFGVDIYVGTANMGVPFVGSCMLANSYGVVVGHLTTGPEIV 219
Query: 158 VIE 160
IE
Sbjct: 220 KIE 222
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,682,368
Number of Sequences: 539616
Number of extensions: 2564399
Number of successful extensions: 6652
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 6455
Number of HSP's gapped (non-prelim): 156
length of query: 186
length of database: 191,569,459
effective HSP length: 111
effective length of query: 75
effective length of database: 131,672,083
effective search space: 9875406225
effective search space used: 9875406225
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)