Query 029874
Match_columns 186
No_of_seqs 114 out of 1096
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 07:37:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029874.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029874hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o3r_A Aldo-keto reductase fam 100.0 1.8E-41 6.1E-46 279.9 19.8 179 1-184 3-183 (316)
2 3ln3_A Dihydrodiol dehydrogena 100.0 8.5E-41 2.9E-45 276.6 19.1 179 2-185 8-191 (324)
3 1us0_A Aldose reductase; oxido 100.0 7.4E-40 2.5E-44 270.2 19.4 178 2-184 4-183 (316)
4 1afs_A 3-alpha-HSD, 3-alpha-hy 100.0 2.5E-39 8.6E-44 267.8 19.1 178 2-184 7-189 (323)
5 3h7u_A Aldo-keto reductase; st 100.0 1.1E-39 3.7E-44 271.3 17.0 166 2-177 27-194 (335)
6 4gie_A Prostaglandin F synthas 100.0 1.4E-39 4.7E-44 265.7 17.3 156 1-185 14-172 (290)
7 1mi3_A Xylose reductase, XR; a 100.0 1.6E-39 5.4E-44 268.9 17.8 172 2-176 7-184 (322)
8 1s1p_A Aldo-keto reductase fam 100.0 3.8E-39 1.3E-43 267.5 19.7 171 2-177 7-182 (331)
9 3buv_A 3-OXO-5-beta-steroid 4- 100.0 4.3E-39 1.5E-43 266.7 19.8 172 2-178 9-186 (326)
10 1qwk_A Aldose reductase, aldo- 100.0 1.7E-39 5.7E-44 268.2 17.0 161 2-177 7-169 (317)
11 4gac_A Alcohol dehydrogenase [ 100.0 2.5E-39 8.7E-44 267.4 18.1 173 1-178 3-178 (324)
12 1vp5_A 2,5-diketo-D-gluconic a 100.0 2.1E-39 7.1E-44 265.6 16.2 150 2-177 17-168 (298)
13 3krb_A Aldose reductase; ssgci 100.0 3.2E-39 1.1E-43 268.3 17.5 172 2-177 16-192 (334)
14 3o0k_A Aldo/keto reductase; ss 100.0 1.8E-39 6.1E-44 264.3 15.1 149 2-177 28-178 (283)
15 1hw6_A 2,5-diketo-D-gluconic a 100.0 4.6E-39 1.6E-43 261.2 16.9 149 2-177 5-155 (278)
16 3f7j_A YVGN protein; aldo-keto 100.0 9.9E-39 3.4E-43 259.0 17.3 148 2-178 8-158 (276)
17 4f40_A Prostaglandin F2-alpha 100.0 8.5E-39 2.9E-43 260.8 16.8 153 2-175 12-167 (288)
18 1zgd_A Chalcone reductase; pol 100.0 1.3E-38 4.6E-43 262.3 17.6 163 5-175 12-180 (312)
19 3up8_A Putative 2,5-diketo-D-g 100.0 1.3E-38 4.4E-43 260.9 17.1 143 2-172 26-170 (298)
20 2wzm_A Aldo-keto reductase; ox 100.0 7E-39 2.4E-43 260.8 15.4 149 2-177 13-163 (283)
21 3b3d_A YTBE protein, putative 100.0 9.7E-39 3.3E-43 263.4 16.2 159 2-185 42-203 (314)
22 3h7r_A Aldo-keto reductase; st 100.0 9E-39 3.1E-43 265.3 15.9 162 2-177 27-190 (331)
23 1mzr_A 2,5-diketo-D-gluconate 100.0 1.1E-38 3.8E-43 261.1 16.0 144 2-171 27-170 (296)
24 1vbj_A Prostaglandin F synthas 100.0 2.3E-38 7.9E-43 257.5 17.2 146 2-176 11-159 (281)
25 3b3e_A YVGN protein; aldo-keto 100.0 2.7E-38 9.1E-43 260.3 17.2 148 2-178 42-192 (310)
26 1ynp_A Oxidoreductase, AKR11C1 100.0 2E-38 6.7E-43 261.9 15.7 152 3-185 25-193 (317)
27 2bgs_A Aldose reductase; holoe 100.0 3.9E-38 1.3E-42 262.7 17.1 165 2-177 39-206 (344)
28 3eau_A Voltage-gated potassium 100.0 7.3E-38 2.5E-42 259.2 15.1 148 3-177 7-171 (327)
29 1pyf_A IOLS protein; beta-alph 100.0 8.3E-38 2.9E-42 257.4 15.0 153 3-185 5-179 (312)
30 1pz1_A GSP69, general stress p 100.0 1.6E-37 5.6E-42 257.9 15.6 153 4-185 6-179 (333)
31 4exb_A Putative uncharacterize 100.0 5.6E-38 1.9E-42 256.5 12.1 151 3-184 34-211 (292)
32 3n6q_A YGHZ aldo-keto reductas 100.0 4.6E-37 1.6E-41 256.3 17.8 143 3-171 17-179 (346)
33 3v0s_A Perakine reductase; AKR 100.0 1.2E-37 4.2E-42 259.0 13.7 153 3-185 5-180 (337)
34 3n2t_A Putative oxidoreductase 100.0 1.8E-37 6E-42 259.1 14.6 152 3-185 23-200 (348)
35 1ur3_M Hypothetical oxidoreduc 100.0 4.5E-37 1.5E-41 253.9 16.5 141 4-171 28-190 (319)
36 3erp_A Putative oxidoreductase 100.0 3.9E-37 1.3E-41 257.4 16.2 143 3-171 38-200 (353)
37 3lut_A Voltage-gated potassium 100.0 2.1E-37 7.1E-42 260.3 14.4 150 2-178 40-206 (367)
38 1lqa_A TAS protein; TIM barrel 100.0 4.2E-36 1.4E-40 250.2 15.6 157 4-171 6-190 (346)
39 2bp1_A Aflatoxin B1 aldehyde r 100.0 3.7E-35 1.3E-39 246.1 10.7 139 6-171 33-183 (360)
40 1gve_A Aflatoxin B1 aldehyde r 100.0 4.7E-35 1.6E-39 242.3 10.2 135 10-171 4-150 (327)
41 3cf4_A Acetyl-COA decarboxylas 91.0 0.087 3E-06 48.1 2.0 72 89-185 231-322 (807)
42 3ngj_A Deoxyribose-phosphate a 64.1 12 0.00042 28.9 5.3 79 14-99 147-229 (239)
43 3f6p_A Transcriptional regulat 57.8 26 0.0009 22.5 5.6 41 141-181 61-101 (120)
44 4eiv_A Deoxyribose-phosphate a 57.1 46 0.0016 26.5 7.6 89 11-101 152-262 (297)
45 2ovl_A Putative racemase; stru 56.1 78 0.0027 25.5 11.1 131 10-179 133-268 (371)
46 1p1x_A Deoxyribose-phosphate a 55.9 70 0.0024 24.9 9.2 82 14-102 139-230 (260)
47 1vcv_A Probable deoxyribose-ph 55.5 22 0.00077 27.1 5.5 36 13-48 117-152 (226)
48 2qxy_A Response regulator; reg 55.4 41 0.0014 22.0 7.6 64 90-180 38-102 (142)
49 1vyr_A Pentaerythritol tetrani 54.4 85 0.0029 25.4 11.4 39 142-181 283-321 (364)
50 3l23_A Sugar phosphate isomera 53.2 76 0.0026 24.5 8.6 48 12-59 13-70 (303)
51 1vpq_A Hypothetical protein TM 50.7 86 0.003 24.4 9.5 68 37-112 49-131 (273)
52 2a4a_A Deoxyribose-phosphate a 50.6 50 0.0017 26.1 6.9 88 13-102 160-257 (281)
53 2gou_A Oxidoreductase, FMN-bin 47.9 1.1E+02 0.0037 24.7 11.9 38 143-181 283-320 (365)
54 1qwg_A PSL synthase;, (2R)-pho 45.0 1.1E+02 0.0036 23.8 7.9 76 23-108 84-169 (251)
55 3l5l_A Xenobiotic reductase A; 44.6 1.2E+02 0.0042 24.4 10.9 38 143-180 285-322 (363)
56 3qc0_A Sugar isomerase; TIM ba 43.9 96 0.0033 23.0 10.3 51 10-60 3-57 (275)
57 1x87_A Urocanase protein; stru 42.8 69 0.0023 27.6 6.8 37 138-175 214-250 (551)
58 2xvc_A ESCRT-III, SSO0910; cel 42.6 21 0.00072 21.2 2.6 19 137-155 38-56 (59)
59 3kto_A Response regulator rece 42.5 50 0.0017 21.5 5.2 41 140-180 66-107 (136)
60 2fkn_A Urocanate hydratase; ro 42.2 68 0.0023 27.6 6.7 116 27-175 111-251 (552)
61 1xhf_A DYE resistance, aerobic 42.1 62 0.0021 20.4 5.5 39 142-180 63-101 (123)
62 3gt7_A Sensor protein; structu 41.8 76 0.0026 21.2 7.7 65 90-180 41-108 (154)
63 3oa3_A Aldolase; structural ge 41.8 46 0.0016 26.4 5.4 82 13-98 177-262 (288)
64 3kht_A Response regulator; PSI 41.3 73 0.0025 20.8 6.4 64 90-179 41-107 (144)
65 1wv2_A Thiazole moeity, thiazo 41.2 1.3E+02 0.0043 23.6 11.3 133 11-176 19-157 (265)
66 2nql_A AGR_PAT_674P, isomerase 40.6 1.4E+02 0.0049 24.0 11.5 120 22-180 164-286 (388)
67 1z41_A YQJM, probable NADH-dep 40.3 1.4E+02 0.0047 23.7 11.9 39 142-180 266-304 (338)
68 3r12_A Deoxyribose-phosphate a 39.7 52 0.0018 25.7 5.3 81 13-99 162-245 (260)
69 2jrt_A Uncharacterized protein 39.3 17 0.00058 23.8 2.1 63 2-64 11-77 (95)
70 3eod_A Protein HNR; response r 39.1 74 0.0025 20.3 6.1 65 90-180 41-106 (130)
71 3lua_A Response regulator rece 38.9 79 0.0027 20.5 6.7 42 139-180 64-108 (140)
72 3hdg_A Uncharacterized protein 38.3 78 0.0027 20.4 5.6 40 141-180 66-106 (137)
73 1uwk_A Urocanate hydratase; hy 38.2 68 0.0023 27.6 6.1 116 27-175 115-255 (557)
74 1o94_A Tmadh, trimethylamine d 38.1 1.8E+02 0.0062 25.7 9.4 40 142-181 280-319 (729)
75 3hgj_A Chromate reductase; TIM 38.0 1.5E+02 0.0053 23.6 11.2 39 142-180 277-315 (349)
76 4e7p_A Response regulator; DNA 37.2 89 0.003 20.6 7.3 64 90-179 56-120 (150)
77 3p6l_A Sugar phosphate isomera 37.2 1.2E+02 0.0043 22.3 7.5 33 13-45 11-43 (262)
78 2qzj_A Two-component response 36.5 50 0.0017 21.6 4.4 41 141-181 63-103 (136)
79 3nl6_A Thiamine biosynthetic b 36.0 1.2E+02 0.004 26.2 7.5 19 24-42 25-43 (540)
80 2a9o_A Response regulator; ess 35.7 70 0.0024 19.9 4.9 39 142-180 61-99 (120)
81 2r14_A Morphinone reductase; H 35.7 1.8E+02 0.006 23.6 10.8 37 143-180 289-325 (377)
82 1zgz_A Torcad operon transcrip 35.4 82 0.0028 19.7 5.7 39 142-180 62-100 (122)
83 3q9s_A DNA-binding response re 35.3 72 0.0025 23.7 5.5 42 139-180 94-135 (249)
84 3obe_A Sugar phosphate isomera 34.8 1.1E+02 0.0039 23.5 6.8 35 12-46 21-58 (305)
85 3kru_A NADH:flavin oxidoreduct 34.4 1.8E+02 0.0061 23.3 11.2 39 142-180 266-304 (343)
86 2o56_A Putative mandelate race 34.4 1.8E+02 0.0063 23.5 11.9 22 22-43 152-173 (407)
87 1k66_A Phytochrome response re 33.4 98 0.0034 20.0 5.7 39 141-179 77-118 (149)
88 3gl9_A Response regulator; bet 32.7 96 0.0033 19.7 6.8 39 141-179 61-102 (122)
89 3hdv_A Response regulator; PSI 32.6 99 0.0034 19.8 5.7 40 141-180 67-108 (136)
90 3t6k_A Response regulator rece 32.2 1E+02 0.0036 19.9 6.0 40 141-180 63-105 (136)
91 3gr7_A NADPH dehydrogenase; fl 31.9 1.9E+02 0.0067 23.0 11.9 39 142-180 266-304 (340)
92 3cg0_A Response regulator rece 31.8 1E+02 0.0034 19.8 5.3 38 142-179 71-108 (140)
93 2ph5_A Homospermidine synthase 31.5 29 0.00099 29.6 2.8 23 23-45 93-115 (480)
94 2zay_A Response regulator rece 31.0 99 0.0034 20.1 5.2 40 141-180 67-109 (147)
95 1dbw_A Transcriptional regulat 30.9 1E+02 0.0035 19.5 7.0 39 142-180 63-102 (126)
96 3cnb_A DNA-binding response re 30.5 1.1E+02 0.0037 19.7 5.9 39 141-179 69-110 (143)
97 1k68_A Phytochrome response re 30.4 1.1E+02 0.0037 19.5 6.9 39 141-179 70-111 (140)
98 2qsj_A DNA-binding response re 29.4 93 0.0032 20.5 4.9 39 142-180 66-105 (154)
99 3ijw_A Aminoglycoside N3-acety 29.2 97 0.0033 24.2 5.4 51 86-155 17-69 (268)
100 2pgw_A Muconate cycloisomerase 28.8 2.3E+02 0.0077 22.8 11.7 118 22-180 147-268 (384)
101 2og9_A Mandelate racemase/muco 28.4 2.3E+02 0.008 22.8 13.3 120 22-180 162-285 (393)
102 2pl1_A Transcriptional regulat 28.3 1.1E+02 0.0037 19.0 6.1 39 142-180 60-99 (121)
103 1tmy_A CHEY protein, TMY; chem 28.3 1E+02 0.0035 19.1 4.8 39 141-179 62-101 (120)
104 3t8y_A CHEB, chemotaxis respon 28.1 96 0.0033 21.0 4.9 40 141-180 86-127 (164)
105 1qkk_A DCTD, C4-dicarboxylate 27.8 1.3E+02 0.0046 19.8 6.6 64 90-179 37-101 (155)
106 2qr3_A Two-component system re 27.7 99 0.0034 19.8 4.7 38 142-179 68-106 (140)
107 2pln_A HP1043, response regula 27.1 1.2E+02 0.0041 19.4 5.1 38 142-179 74-112 (137)
108 2nyg_A YOKD protein; PFAM02522 27.0 1.2E+02 0.0041 23.7 5.5 51 86-155 15-67 (273)
109 2hqr_A Putative transcriptiona 26.4 1.7E+02 0.006 20.7 6.3 38 142-179 56-94 (223)
110 2oqr_A Sensory transduction pr 26.3 1.4E+02 0.0046 21.4 5.6 40 142-181 64-103 (230)
111 3k30_A Histamine dehydrogenase 26.3 3.2E+02 0.011 23.8 11.4 39 142-180 283-321 (690)
112 3hzh_A Chemotaxis response reg 26.0 1.3E+02 0.0045 20.0 5.2 39 141-179 98-137 (157)
113 3eul_A Possible nitrate/nitrit 26.0 1.4E+02 0.0049 19.5 5.5 39 141-179 76-115 (152)
114 3cz5_A Two-component response 26.0 1.4E+02 0.0049 19.5 6.6 39 141-179 66-105 (153)
115 2oa4_A SIR5; structure, struct 25.5 82 0.0028 20.8 3.7 62 3-64 13-78 (101)
116 1mdl_A Mandelate racemase; iso 25.4 2.5E+02 0.0086 22.2 13.7 119 23-180 145-267 (359)
117 2qvg_A Two component response 25.3 1.4E+02 0.0048 19.2 6.2 39 141-179 74-115 (143)
118 1zh2_A KDP operon transcriptio 25.3 70 0.0024 19.9 3.5 39 142-180 61-99 (121)
119 2qgy_A Enolase from the enviro 24.8 2.7E+02 0.0093 22.4 13.0 120 22-180 149-272 (391)
120 3g8r_A Probable spore coat pol 24.8 2.8E+02 0.0095 22.5 9.8 124 21-176 75-219 (350)
121 3cu5_A Two component transcrip 24.5 1.5E+02 0.0051 19.3 5.5 38 142-179 65-103 (141)
122 3h5i_A Response regulator/sens 24.1 93 0.0032 20.2 4.0 38 141-178 66-103 (140)
123 3aty_A Tcoye, prostaglandin F2 23.4 3E+02 0.01 22.3 11.1 35 145-180 299-333 (379)
124 3gka_A N-ethylmaleimide reduct 22.9 3E+02 0.01 22.2 9.4 16 28-43 165-180 (361)
125 3snk_A Response regulator CHEY 22.8 27 0.00092 22.9 0.9 40 141-180 74-114 (135)
126 3nhm_A Response regulator; pro 22.7 1.5E+02 0.0051 18.7 4.8 37 141-178 62-101 (133)
127 1jbe_A Chemotaxis protein CHEY 22.5 1.5E+02 0.0052 18.6 7.0 39 142-180 65-106 (128)
128 3b2n_A Uncharacterized protein 22.3 1.6E+02 0.0055 18.8 5.1 39 141-179 64-103 (133)
129 1tzz_A Hypothetical protein L1 22.1 3.1E+02 0.011 22.0 11.9 83 10-99 150-239 (392)
130 3stp_A Galactonate dehydratase 21.9 3.3E+02 0.011 22.3 12.6 119 22-180 179-308 (412)
131 1r0m_A N-acylamino acid racema 21.6 3.1E+02 0.011 21.8 9.7 71 22-101 148-219 (375)
132 3cg4_A Response regulator rece 21.6 1.1E+02 0.0036 19.8 3.9 38 141-178 66-106 (142)
133 1vpy_A Protein (hypothetical p 21.4 2.6E+02 0.0088 21.8 6.6 94 11-112 13-125 (289)
134 1mvo_A PHOP response regulator 21.3 1.6E+02 0.0056 18.6 4.8 38 142-179 63-101 (136)
135 3rqi_A Response regulator prot 21.3 1.2E+02 0.0041 21.0 4.3 39 142-180 67-106 (184)
136 3r0j_A Possible two component 21.2 1.8E+02 0.0062 21.2 5.5 40 141-180 82-122 (250)
137 3jte_A Response regulator rece 21.0 1.7E+02 0.0059 18.7 6.7 39 141-179 64-103 (143)
138 1olt_A Oxygen-independent copr 21.0 3.5E+02 0.012 22.2 11.4 79 77-166 214-294 (457)
139 3gqe_A Non-structural protein 21.0 40 0.0014 24.3 1.6 28 9-36 106-133 (168)
140 3qy7_A Tyrosine-protein phosph 20.9 2.1E+02 0.007 21.9 5.9 25 23-47 19-43 (262)
141 1yio_A Response regulatory pro 20.6 1.9E+02 0.0066 20.1 5.4 64 90-179 38-102 (208)
142 3lmz_A Putative sugar isomeras 20.4 2.6E+02 0.0089 20.5 8.1 36 11-46 17-52 (257)
143 2hsa_B 12-oxophytodienoate red 20.4 3.5E+02 0.012 22.0 13.0 40 141-181 307-346 (402)
144 2hzg_A Mandelate racemase/muco 20.4 3.4E+02 0.012 21.8 12.3 120 22-180 145-274 (401)
145 3f6c_A Positive transcription 20.3 1.2E+02 0.004 19.3 3.8 39 141-179 61-100 (134)
146 1kgs_A DRRD, DNA binding respo 20.3 1.7E+02 0.0059 20.7 5.1 39 141-179 61-100 (225)
147 2jba_A Phosphate regulon trans 20.1 75 0.0026 20.0 2.8 39 141-179 61-102 (127)
148 2rjn_A Response regulator rece 20.1 1.9E+02 0.0066 18.9 6.7 34 142-175 67-101 (154)
149 1y60_A Formaldehyde-activating 20.1 1.7E+02 0.0058 21.2 4.7 32 49-80 86-120 (169)
150 1ps9_A 2,4-dienoyl-COA reducta 20.1 4.3E+02 0.015 22.9 11.4 39 142-180 269-307 (671)
No 1
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A*
Probab=100.00 E-value=1.8e-41 Score=279.85 Aligned_cols=179 Identities=36% Similarity=0.686 Sum_probs=147.8
Q ss_pred CeeecCCCCcCCccccccccCCchhHHHHHHHHHHhCCceEeCCCCCCCHHHHHHHHHHHhhcCCccccceEEEeccCCC
Q 029874 1 MAITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNS 80 (186)
Q Consensus 1 ~~~~~~tg~~v~~lglG~~~~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~~ 80 (186)
.+++++||.+||+||||||+.+.+++.+++..|+++|||+||||+.||+|..+|++|++.+..+.++|++++|+||+|+.
T Consensus 3 ~~~~l~tg~~v~~lglGt~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~~~~~~~~R~~v~I~TK~~~~ 82 (316)
T 3o3r_A 3 TFVKLRTKAKMPLVGLGTWKSPPGQVKEAVKAAIDAGYRHFDCAYVYQNESEVGEAIQEKIKEKAVRREDLFIVSKLWST 82 (316)
T ss_dssp CEEECTTSCEEESBEEBCTTCCTTHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHHHHTTSCCGGGCEEEEEECGG
T ss_pred CeEECCCCCEeCCeeeECCcCCcHHHHHHHHHHHHcCCCEEEccCccCCHHHHHHHHHHHHhhCCCChHHcEEEeeeCCC
Confidence 36789999999999999999999999999999999999999999999999999999999877776799999999999864
Q ss_pred --ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEE
Q 029874 81 --DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIG 158 (186)
Q Consensus 81 --~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iG 158 (186)
+++.+++++++||++||+||||+|++|||+...+ ++...+.++++.. .+...++.++|++|++|+++|+||+||
T Consensus 83 ~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~---~~~~~~~~~~~~~-~~~~~~~~e~~~al~~l~~~Gkir~iG 158 (316)
T 3o3r_A 83 FFEKSLMKEAFQKTLSDLKLDYLDLYLIHWPQGLQA---GKEFLPKDSQGKV-LMSKSTFLDAWEGMEELVDQGLVKALG 158 (316)
T ss_dssp GCSHHHHHHHHHHHHHHHTCSCEEEEEESCSSCBCC---SSCSSCBCTTSCB-CBCSCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCeeeEEEEcCCccccC---ccccccccccccc-ccccccHHHHHHHHHHHHHcCCCcEEE
Confidence 7899999999999999999999999999975432 1122222222211 223456899999999999999999999
Q ss_pred ecCCCchhHhhHHhhccCCCCCccee
Q 029874 159 IRYVGILNPCEHSIRSSKFSTKFIIV 184 (186)
Q Consensus 159 vsn~~~~~l~~~~~~~~~~~~~~~~~ 184 (186)
||||+.+++ +.+++...++.+++++
T Consensus 159 vSn~~~~~l-~~~~~~~~~~~~p~~~ 183 (316)
T 3o3r_A 159 VSNFNHFQI-ERLLNKPGLKHKPVTN 183 (316)
T ss_dssp EESCCHHHH-HHHHTCTTCCSCCCEE
T ss_pred EecCCHHHH-HHHHHhCCCCCCceEe
Confidence 999999994 5555655554344443
No 2
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=100.00 E-value=8.5e-41 Score=276.61 Aligned_cols=179 Identities=34% Similarity=0.603 Sum_probs=147.2
Q ss_pred eeecCCCCcCCcccccccc---CCchhHHHHHHHHHHhCCceEeCCCCCCCHHHHHHHHHHHhhcCCccccceEEEeccC
Q 029874 2 AITLNNGFKMPIIGLGVWR---MDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLW 78 (186)
Q Consensus 2 ~~~~~tg~~v~~lglG~~~---~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~ 78 (186)
++.++||.+||+||||||+ .+.+++.++++.|+++|||+||||+.||+|..+|++|++.+..|.++|++++|+||+|
T Consensus 8 ~~~L~tg~~v~~lglGt~~~~~~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~~~~~~~~R~~~~I~TK~~ 87 (324)
T 3ln3_A 8 CVXLNDGHLIPALGFGTYXPXEVPXSXSLEAACLALDVGYRHVDTAYAYQVEEEIGQAIQSXIXAGVVXREDLFVTTKLW 87 (324)
T ss_dssp EEECTTSCEEESSEEECCCCTTSCHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSCCGGGCEEEEEEC
T ss_pred eEECCCCCCcCCeeecCCcccCCChHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHhhccCCcccceeEEEeeeC
Confidence 5677999999999999998 6778899999999999999999999999999999999998877778999999999998
Q ss_pred CC--ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccE
Q 029874 79 NS--DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRS 156 (186)
Q Consensus 79 ~~--~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~ 156 (186)
.. +++.+++++++||++||+||||+|++|||+...+ +....+.++++.. .....++.++|++|++|+++|+||+
T Consensus 88 ~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~---~~~~~~~~~~~~~-~~~~~~~~e~~~al~~l~~~Gkir~ 163 (324)
T 3ln3_A 88 CTCFRPELVXPALEXSLXXLQLDYVDLYIMHYPVPMXS---GDNDFPVNEQGXS-LLDTVDFCDTWERLEECXDAGLVXS 163 (324)
T ss_dssp GGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCC---SSCSSCBCTTCCB-CBCCCCHHHHHHHHHHHHHTTSEEE
T ss_pred CccCCHHHHHHHHHHHHHHhCCCcceEEEEecCccccc---ccccccccccccc-ccccCCHHHHHHHHHHHHhcCCeeE
Confidence 64 7899999999999999999999999999976432 1122222222221 1123568999999999999999999
Q ss_pred EEecCCCchhHhhHHhhccCCCCCcceee
Q 029874 157 IGIRYVGILNPCEHSIRSSKFSTKFIIVT 185 (186)
Q Consensus 157 iGvsn~~~~~l~~~~~~~~~~~~~~~~~~ 185 (186)
||||||+.++ ++.+++...++.+++++|
T Consensus 164 iGvSn~~~~~-l~~~~~~~~~~~~p~~~Q 191 (324)
T 3ln3_A 164 IGVSNFNHRQ-LERILNXPGLXYXPVCNQ 191 (324)
T ss_dssp EEEESCCHHH-HHHHHTCTTCCCCCSEEE
T ss_pred EEecCCcHHH-HHHHHHhcCccCCceeeE
Confidence 9999999988 455666666653344433
No 3
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=100.00 E-value=7.4e-40 Score=270.16 Aligned_cols=178 Identities=44% Similarity=0.758 Sum_probs=143.0
Q ss_pred eeecCCCCcCCccccccccCCchhHHHHHHHHHHhCCceEeCCCCCCCHHHHHHHHHHHhhcCCccccceEEEeccCCC-
Q 029874 2 AITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNS- 80 (186)
Q Consensus 2 ~~~~~tg~~v~~lglG~~~~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~~- 80 (186)
++.++||.+||+||||||+.+.+++.+++..|+++|||+||||+.||+|..+|++|+..+.+|.++|++++|+||+|..
T Consensus 4 ~~~l~tg~~v~~lglGt~~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~~R~~~~I~TK~~~~~ 83 (316)
T 1us0_A 4 RILLNNGAKMPILGLGTWKSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKREELFIVSKLWCTY 83 (316)
T ss_dssp EEECTTSCEEESBCEECTTCCHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSSCGGGCEEEEEECGGG
T ss_pred eEECCCCCEECCEeEECCcCCHHHHHHHHHHHHHcCCCEEEcccccCCHHHHHHHHHHHHhcCCCChhHeEEEEeeCCCc
Confidence 5678999999999999999999999999999999999999999999999999999998776676789999999999853
Q ss_pred -ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEEe
Q 029874 81 -DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGI 159 (186)
Q Consensus 81 -~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv 159 (186)
+++.+++++++||++||+||||+|++|||+...+ +++..+.+.++.... ...++.++|++|++|+++|+||+|||
T Consensus 84 ~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~---~~~~~~~~~~~~~~~-~~~~~~e~~~ale~l~~~Gkir~iGv 159 (316)
T 1us0_A 84 HEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKP---GKEFFPLDESGNVVP-SDTNILDTWAAMEELVDEGLVKAIGI 159 (316)
T ss_dssp CSHHHHHHHHHHHHHHHTCSCBSEEEESSSCCBCC---SSCSSCBCTTSCBCB-CSCCHHHHHHHHHHHHHTTSBSCEEE
T ss_pred CCHHHHHHHHHHHHHHhCCCceeeEEEecCccccc---ccccccccccccccc-ccccHHHHHHHHHHHHHCCCccEEEE
Confidence 7899999999999999999999999999965321 111111111110000 02357899999999999999999999
Q ss_pred cCCCchhHhhHHhhccCCCCCccee
Q 029874 160 RYVGILNPCEHSIRSSKFSTKFIIV 184 (186)
Q Consensus 160 sn~~~~~l~~~~~~~~~~~~~~~~~ 184 (186)
|||+.++ ++.+++...+++++.++
T Consensus 160 Sn~~~~~-l~~~~~~~~~~~~p~~~ 183 (316)
T 1us0_A 160 SNFNHLQ-VEMILNKPGLKYKPAVN 183 (316)
T ss_dssp ESCCHHH-HHHHHTCTTCCSCCSEE
T ss_pred ecCCHHH-HHHHHHhCcccCCceee
Confidence 9999998 45555555553333333
No 4
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A*
Probab=100.00 E-value=2.5e-39 Score=267.76 Aligned_cols=178 Identities=34% Similarity=0.568 Sum_probs=141.2
Q ss_pred eeecCCCCcCCccccccc---cCCchhHHHHHHHHHHhCCceEeCCCCCCCHHHHHHHHHHHhhcCCccccceEEEeccC
Q 029874 2 AITLNNGFKMPIIGLGVW---RMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLW 78 (186)
Q Consensus 2 ~~~~~tg~~v~~lglG~~---~~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~ 78 (186)
++.++||.+||+|||||| +.+.+++.+++..|+++|||+||||+.||+|..+|++|++.+.+|.++|++++|+||+|
T Consensus 7 ~~~L~tg~~v~~lglGt~~~g~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~~R~~~~I~TK~~ 86 (323)
T 1afs_A 7 RVALNDGNFIPVLGFGTTVPEKVAKDEVIKATKIAIDNGFRHFDSAYLYEVEEEVGQAIRSKIEDGTVKREDIFYTSKLW 86 (323)
T ss_dssp EEECTTSCEEESSEEECCCCTTSCTTHHHHHHHHHHHTTCCEEECCTTTTCHHHHHHHHHHHHHTTSCCGGGCEEEEEEC
T ss_pred eEECCCCCeECCeeEecccCCCCCHHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHHHhcCCCChHHeEEEEecC
Confidence 456799999999999999 56788899999999999999999999999999999999987777767899999999998
Q ss_pred CC--ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccE
Q 029874 79 NS--DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRS 156 (186)
Q Consensus 79 ~~--~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~ 156 (186)
.. +++.+++++++||++||+||||+|++|||....+ ++...+.+.++.... ...++.++|++|++|+++|+||+
T Consensus 87 ~~~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~---~~~~~~~d~~~~~~~-~~~~~~e~~~ale~l~~~Gkir~ 162 (323)
T 1afs_A 87 STFHRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQP---GDIFFPRDEHGKLLF-ETVDICDTWEAMEKCKDAGLAKS 162 (323)
T ss_dssp GGGCSTTTHHHHHHHHHHHHCCSSEEEEEESCSCEECS---SSSSSCBCTTCCBCE-ECCCHHHHHHHHHHHHHTTSEEE
T ss_pred CCcCCHHHHHHHHHHHHHHhCCCceeEEEecCcCcCCC---CcccCcccccccccc-cCCCHHHHHHHHHHHHHcCCcCE
Confidence 53 7899999999999999999999999999964311 011111111110000 12357899999999999999999
Q ss_pred EEecCCCchhHhhHHhhccCCCCCccee
Q 029874 157 IGIRYVGILNPCEHSIRSSKFSTKFIIV 184 (186)
Q Consensus 157 iGvsn~~~~~l~~~~~~~~~~~~~~~~~ 184 (186)
||||||+.++ ++.+++...+++++.++
T Consensus 163 iGvSn~~~~~-l~~~~~~~~~~~~p~~~ 189 (323)
T 1afs_A 163 IGVSNFNCRQ-LERILNKPGLKYKPVCN 189 (323)
T ss_dssp EEEESCCHHH-HHHHHTCTTCCSCCSEE
T ss_pred EEeeCCCHHH-HHHHHHhcCcCCCCEEE
Confidence 9999999998 45555555553233333
No 5
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana}
Probab=100.00 E-value=1.1e-39 Score=271.26 Aligned_cols=166 Identities=40% Similarity=0.722 Sum_probs=139.5
Q ss_pred eeecCCCCcCCccccccccCCchhHHHHHHHHHHhCCceEeCCCCCCCHHHHHHHHHHHhhcCCccccceEEEeccCCC-
Q 029874 2 AITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNS- 80 (186)
Q Consensus 2 ~~~~~tg~~v~~lglG~~~~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~~- 80 (186)
++.++||.+||+||||||+++.+++.++|+.|+++|||+||||+.||+|..+|++|++.+..|.++|++++|+||+|..
T Consensus 27 ~~~L~tg~~v~~lglGt~~~~~~~~~~~v~~Al~~Gi~~~DTA~~YgsE~~lG~al~~~~~~g~~~R~~v~I~TK~~~~~ 106 (335)
T 3h7u_A 27 FFKLNTGAKFPSVGLGTWQASPGLVGDAVAAAVKIGYRHIDCAQIYGNEKEIGAVLKKLFEDRVVKREDLFITSKLWCTD 106 (335)
T ss_dssp EEECTTSCEEESBCEECTTCCHHHHHHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHHHHHTTSCCGGGCEEEEEECGGG
T ss_pred eEEcCCCCEecceeEeCCcCCHHHHHHHHHHHHHcCCCEEECCcccCCHHHHHHHHHHHHhcCCCCcceeEEEeeeCCCC
Confidence 5677899999999999999999999999999999999999999999999999999999877786789999999999864
Q ss_pred -ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEEe
Q 029874 81 -DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGI 159 (186)
Q Consensus 81 -~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv 159 (186)
+++.+++++++||++||+||||+|++|||+...+. . ..+ +.+. ....++.++|++|++|+++|+||+|||
T Consensus 107 ~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~---~-~~~-~~~~----~~~~~~~e~~~aL~~l~~~Gkir~iGv 177 (335)
T 3h7u_A 107 HDPQDVPEALNRTLKDLQLEYVDLYLIHWPARIKKG---S-VGI-KPEN----LLPVDIPSTWKAMEALYDSGKARAIGV 177 (335)
T ss_dssp CSTTHHHHHHHHHHHHHTCSCBSEEEECSSCEECSS---C-SSC-CGGG----EECCCHHHHHHHHHHHHHTTSBSSEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEEcCCCccccc---c-ccc-cccc----cccCCHHHHHHHHHHHHHcCCccEEEe
Confidence 78999999999999999999999999999754321 0 000 0000 012457899999999999999999999
Q ss_pred cCCCchhHhhHHhhccCC
Q 029874 160 RYVGILNPCEHSIRSSKF 177 (186)
Q Consensus 160 sn~~~~~l~~~~~~~~~~ 177 (186)
|||+.+++.+ +++...+
T Consensus 178 Sn~~~~~l~~-~~~~~~~ 194 (335)
T 3h7u_A 178 SNFSTKKLAD-LLELARV 194 (335)
T ss_dssp ESCCHHHHHH-HHHHCSS
T ss_pred cCCCHHHHHH-HHHhCCC
Confidence 9999998544 4444443
No 6
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=100.00 E-value=1.4e-39 Score=265.74 Aligned_cols=156 Identities=38% Similarity=0.644 Sum_probs=136.8
Q ss_pred CeeecCCCCcCCccccccccCC-chhHHHHHHHHHHhCCceEeCCCCCCCHHHHHHHHHHHhhcCCccccceEEEeccCC
Q 029874 1 MAITLNNGFKMPIIGLGVWRMD-ESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWN 79 (186)
Q Consensus 1 ~~~~~~tg~~v~~lglG~~~~~-~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~ 79 (186)
.+++++||++||.||||||+.+ .+++.++|+.|+++|||+||||+.||||..+|++++.. + ++|++++++||++.
T Consensus 14 ~~v~Ln~G~~ip~lGlGtw~~~d~~e~~~~v~~Al~~Gin~~DTA~~YgsE~~vG~~l~~~---~-~~r~~~~i~tk~~~ 89 (290)
T 4gie_A 14 NCVTLHNSVRMPQLGLGVWRAQDGAETANAVRWAIEAGYRHIDTAYIYSNERGVGQGIRES---G-VPREEVWVTTKVWN 89 (290)
T ss_dssp CEEECTTSCEEESBCEECTTCCTTHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHH---C-CCGGGSEEEEEECG
T ss_pred CEEEcCCCCCccceeEECCCCCCHHHHHHHHHHHHHcCCCEEecccccCCHHHHHHHHHhc---C-Ccchhccccccccc
Confidence 3688999999999999999885 57899999999999999999999999999999999984 3 68999999999976
Q ss_pred C--ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEE
Q 029874 80 S--DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSI 157 (186)
Q Consensus 80 ~--~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i 157 (186)
. +++.+++++++||++||+||||+|++|||+.. +..++|++|++|+++|+||+|
T Consensus 90 ~~~~~~~~~~~~e~SL~rL~~dyiDly~lH~p~~~------------------------~~~e~~~al~~l~~~Gkir~i 145 (290)
T 4gie_A 90 SDQGYEKTLAAFERSRELLGLEYIDLYLIHWPGKK------------------------KFVDTWKALEKLYEEKKVRAI 145 (290)
T ss_dssp GGCSHHHHHHHHHHHHHHHTCSCEEEEEECCCCSS------------------------SHHHHHHHHHHHHHTTSEEEE
T ss_pred cCCChHHHHHHHHHHHHHhCCCceeeEEecCCCCC------------------------cchHHHHHHHHHHHCCCccee
Confidence 5 78999999999999999999999999998543 257899999999999999999
Q ss_pred EecCCCchhHhhHHhhccCCCCCcceee
Q 029874 158 GIRYVGILNPCEHSIRSSKFSTKFIIVT 185 (186)
Q Consensus 158 Gvsn~~~~~l~~~~~~~~~~~~~~~~~~ 185 (186)
|+|||+.+++ +.+.....+......++
T Consensus 146 GvSn~~~~~l-~~~~~~~~~~~~~~q~~ 172 (290)
T 4gie_A 146 GVSNFEPHHL-TELFKSCKIRPMVNQVE 172 (290)
T ss_dssp EEESCCHHHH-HHHHTTCSSCCSEEEEE
T ss_pred eecCCCHHHH-HHHHHhccCCCceeeEe
Confidence 9999999994 55556666665554444
No 7
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A*
Probab=100.00 E-value=1.6e-39 Score=268.86 Aligned_cols=172 Identities=37% Similarity=0.653 Sum_probs=138.4
Q ss_pred eeecCCCCcCCccccccccCCchhHHHHHHHHHHhCCceEeCCCCCCCHHHHHHHHHHHhhcCCccccceEEEeccCCC-
Q 029874 2 AITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNS- 80 (186)
Q Consensus 2 ~~~~~tg~~v~~lglG~~~~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~~- 80 (186)
+..++||.+||+||||||+.+.+++.+++..|+++|||+||||+.||+|..+|++|+..+.+|.++|++++|+||+|..
T Consensus 7 ~~~L~tg~~v~~lglGt~~~~~~~~~~~v~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~~R~~~~i~TK~~~~~ 86 (322)
T 1mi3_A 7 DIKLSSGHLMPSIGFGCWKLANATAGEQVYQAIKAGYRLFDGAEDYGNEKEVGDGVKRAIDEGLVKREEIFLTSKLWNNY 86 (322)
T ss_dssp EEECTTSCEEESBCEECTTCCHHHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHHHHTTSCCGGGCEEEEEECGGG
T ss_pred eEECCCCCEECCeeeeCCcCCHHHHHHHHHHHHHcCCCEEEccccccCHHHHHHHHHHHhhcCCCChhhEEEEEeeCCCC
Confidence 4567999999999999999999999999999999999999999999999999999998776676789999999999853
Q ss_pred -ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCC----CCcccccccccHHHHHHHHHHHHHcCCcc
Q 029874 81 -DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDA----DGVLEIDTTISLETTWHAMEDLVSMGLVR 155 (186)
Q Consensus 81 -~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~l~~~G~ir 155 (186)
+++.+++++++||++||+||||+|++|||...... .++...+.+. ++.... ...++.++|++|++|+++|+||
T Consensus 87 ~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~-~~~~~~~~d~~~~~~~~~~~-~~~~~~e~~~al~~l~~~Gkir 164 (322)
T 1mi3_A 87 HDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFV-PIEEKYPPGFYCGDGNNFVY-EDVPILETWKALEKLVAAGKIK 164 (322)
T ss_dssp CSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCC-CTTTCSSCTTCCSSTTCCCB-CCCCHHHHHHHHHHHHHTTSEE
T ss_pred CCHHHHHHHHHHHHHHhCCCCeeeEEEecCcccccC-cccccccccccccccccccc-cCCCHHHHHHHHHHHHHcCCcC
Confidence 78999999999999999999999999999643100 0011001010 110000 0235789999999999999999
Q ss_pred EEEecCCCchhHhhHHhhccC
Q 029874 156 SIGIRYVGILNPCEHSIRSSK 176 (186)
Q Consensus 156 ~iGvsn~~~~~l~~~~~~~~~ 176 (186)
+||||||+.+++.+ +++...
T Consensus 165 ~iGvSn~~~~~l~~-~~~~~~ 184 (322)
T 1mi3_A 165 SIGVSNFPGALLLD-LLRGAT 184 (322)
T ss_dssp EEEEESCCHHHHHH-HHHHCS
T ss_pred EEEEcCCCHHHHHH-HHHhCC
Confidence 99999999999554 444443
No 8
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Probab=100.00 E-value=3.8e-39 Score=267.53 Aligned_cols=171 Identities=39% Similarity=0.639 Sum_probs=139.0
Q ss_pred eeecCCCCcCCccccccc---cCCchhHHHHHHHHHHhCCceEeCCCCCCCHHHHHHHHHHHhhcCCccccceEEEeccC
Q 029874 2 AITLNNGFKMPIIGLGVW---RMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLW 78 (186)
Q Consensus 2 ~~~~~tg~~v~~lglG~~---~~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~ 78 (186)
++.++||.+||+|||||| +.+.+++.+++..|+++|||+||||+.||+|..+|++|+..+..|.++|++++|+||+|
T Consensus 7 ~~~L~tg~~v~~lglGt~~~~~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~~~~~R~~~~I~TK~~ 86 (331)
T 1s1p_A 7 CVKLNDGHFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLW 86 (331)
T ss_dssp EEECTTSCEEESEEEECCCCTTSCTTHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSCCGGGCEEEEEEC
T ss_pred eEECCCCCEeCCeeEcCccCCCCCHHHHHHHHHHHHHcCCCEEEccccccCHHHHHHHHHHHHhcCCCCchheEEEeccC
Confidence 467799999999999999 66788899999999999999999999999999999999987766767899999999998
Q ss_pred CC--ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccE
Q 029874 79 NS--DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRS 156 (186)
Q Consensus 79 ~~--~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~ 156 (186)
.. +++.+++++++||++||+||||+|++|||....+ ++...+.+.++.... ...++.++|++|++|+++|+||+
T Consensus 87 ~~~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~---~~~~~~~d~~g~~~~-~~~~~~e~~~ale~l~~~Gkir~ 162 (331)
T 1s1p_A 87 STFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKP---GEELSPTDENGKVIF-DIVDLCTTWEAMEKCKDAGLAKS 162 (331)
T ss_dssp GGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCC---SSCSSCBCTTSCBCB-CCCCHHHHHHHHHHHHHTTSEEE
T ss_pred CccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCcccCC---CcccCCccccccccc-cccCHHHHHHHHHHHHHcCCccE
Confidence 53 7899999999999999999999999999965321 111111111110000 12357899999999999999999
Q ss_pred EEecCCCchhHhhHHhhccCC
Q 029874 157 IGIRYVGILNPCEHSIRSSKF 177 (186)
Q Consensus 157 iGvsn~~~~~l~~~~~~~~~~ 177 (186)
||||||+.++ ++.+++...+
T Consensus 163 iGvSn~~~~~-l~~~~~~~~~ 182 (331)
T 1s1p_A 163 IGVSNFNRRQ-LEMILNKPGL 182 (331)
T ss_dssp EEEESCCHHH-HHHHHTCTTC
T ss_pred EEEeCCCHHH-HHHHHHhcCc
Confidence 9999999988 4555555555
No 9
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Probab=100.00 E-value=4.3e-39 Score=266.69 Aligned_cols=172 Identities=37% Similarity=0.582 Sum_probs=139.8
Q ss_pred eeecCCCCcCCcccccccc----CCchhHHHHHHHHHHhCCceEeCCCCCCCHHHHHHHHHHHhhcCCccccceEEEecc
Q 029874 2 AITLNNGFKMPIIGLGVWR----MDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKL 77 (186)
Q Consensus 2 ~~~~~tg~~v~~lglG~~~----~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~~~~~R~~~~i~tK~ 77 (186)
++.++||.+||+||||||+ .+.+++.+++..|+++|||+||||+.||+|..+|++|+..+..|.++|++++|+||+
T Consensus 9 ~~~L~tg~~v~~lglGt~~~g~~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~~R~~~~i~TK~ 88 (326)
T 3buv_A 9 RIPLSDGNSIPIIGLGTYSEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIREKIAEGKVRREDIFYCGKL 88 (326)
T ss_dssp EEECTTSCEEESBCEECCCCGGGCCTTHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSCCGGGCEEEEEE
T ss_pred eEECCCCCeeCCeeEcccCCCCCCCHHHHHHHHHHHHHcCCCEEECccccCCHHHHHHHHHHHHhcCCCChhHeEEEeee
Confidence 4667999999999999998 678889999999999999999999999999999999998776676789999999999
Q ss_pred CCC--ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCcc
Q 029874 78 WNS--DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVR 155 (186)
Q Consensus 78 ~~~--~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir 155 (186)
|.. +++.+++++++||++||+||||+|++|||+...+ ++...+.+.++.... ...++.++|++|++|+++|+||
T Consensus 89 ~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~---~~~~~~~~~~~~~~~-~~~~~~e~~~ale~l~~~Gkir 164 (326)
T 3buv_A 89 WATNHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKP---GDEIYPRDENGKWLY-HKSNLCATWEAMEACKDAGLVK 164 (326)
T ss_dssp CGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCC---SSCSSCBCTTCCBCB-CCCCHHHHHHHHHHHHHTTSEE
T ss_pred CCCcCCHHHHHHHHHHHHHHhCCCceeEEEEccCCccCC---ccccCcccccccccc-ccccHHHHHHHHHHHHHcCCcc
Confidence 853 7899999999999999999999999999975321 111111111110000 0235789999999999999999
Q ss_pred EEEecCCCchhHhhHHhhccCCC
Q 029874 156 SIGIRYVGILNPCEHSIRSSKFS 178 (186)
Q Consensus 156 ~iGvsn~~~~~l~~~~~~~~~~~ 178 (186)
+||||||+.++ ++.+++...+.
T Consensus 165 ~iGvSn~~~~~-l~~~~~~~~~~ 186 (326)
T 3buv_A 165 SLGVSNFNRRQ-LELILNKPGLK 186 (326)
T ss_dssp EEEEESCCHHH-HHHHHTCTTCC
T ss_pred EEEEeCCCHHH-HHHHHHhCCCC
Confidence 99999999988 45556555554
No 10
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=100.00 E-value=1.7e-39 Score=268.21 Aligned_cols=161 Identities=36% Similarity=0.656 Sum_probs=137.1
Q ss_pred eeecCCCCcCCccccccccCCchhHHHHHHHHHHhCCceEeCCCCCCCHHHHHHHHHHHhhcCCccccceEEEeccCCC-
Q 029874 2 AITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNS- 80 (186)
Q Consensus 2 ~~~~~tg~~v~~lglG~~~~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~~- 80 (186)
++.++||.+||+||||||+++.+++.+++..|+++|||+||||+.||+|..+|++|+..+.+|.++|++++|+||+|..
T Consensus 7 ~~~l~~g~~vs~lglGt~~~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~vG~al~~~~~~~~~~R~~~~i~TK~~~~~ 86 (317)
T 1qwk_A 7 SIKLSNGVEMPVIGLGTWQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKELLEEGVVKREELFITTKAWTHE 86 (317)
T ss_dssp EEECTTSCEEESBCEECTTCCHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHHTSCCGGGCEEEEEECTTT
T ss_pred eEECCCCCEeCCeeEECCcCCHHHHHHHHHHHHHcCCCEEEccccccCHHHHHHHHHHHhhcCCCChhheEEEeeeCCCc
Confidence 4567899999999999999999999999999999999999999999999999999998666666789999999999854
Q ss_pred -ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEEe
Q 029874 81 -DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGI 159 (186)
Q Consensus 81 -~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv 159 (186)
+++.+++++++||++||+||||+|++|||+...+ ++ + . .+ ..+..++|++|++|+++|+||+|||
T Consensus 87 ~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~---~~-------~-~--~~-~~~~~e~~~al~~l~~~Gkir~iGv 152 (317)
T 1qwk_A 87 LAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFND---DM-------S-E--HI-ASPVEDVWRQFDAVYKAGLAKAVGV 152 (317)
T ss_dssp SSTTTHHHHHHHHHHHHTCSCBSEEEESCSCEECT---TS-------C-S--EE-CCCHHHHHHHHHHHHHTTSBSSEEE
T ss_pred CCHHHHHHHHHHHHHHhCCCceeEEEEeccCcccc---cc-------c-c--cc-CCCHHHHHHHHHHHHHcCCeeEEEe
Confidence 7899999999999999999999999999965311 00 0 0 00 2347899999999999999999999
Q ss_pred cCCCchhHhhHHhhccCC
Q 029874 160 RYVGILNPCEHSIRSSKF 177 (186)
Q Consensus 160 sn~~~~~l~~~~~~~~~~ 177 (186)
|||+.+++ +.+++...+
T Consensus 153 Sn~~~~~l-~~~~~~~~~ 169 (317)
T 1qwk_A 153 SNWNNDQI-SRALALGLT 169 (317)
T ss_dssp ESCCHHHH-HHHHTTCSS
T ss_pred cCCCHHHH-HHHHHhcCC
Confidence 99999985 445554443
No 11
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=100.00 E-value=2.5e-39 Score=267.44 Aligned_cols=173 Identities=40% Similarity=0.732 Sum_probs=143.2
Q ss_pred CeeecCCCCcCCccccccccCCchhHHHHHHHHHHhCCceEeCCCCCCCHHHHHHHHHHHhhcC-CccccceEEEeccCC
Q 029874 1 MAITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTG-LVKREDLFITTKLWN 79 (186)
Q Consensus 1 ~~~~~~tg~~v~~lglG~~~~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~~-~~~R~~~~i~tK~~~ 79 (186)
.+++++||++||.||||||+++++++.++|+.|+++|||+||||+.||||..+|++|++...++ .+.|+++++++|++.
T Consensus 3 ~~v~LntG~~vp~iGlGtw~~~~~~a~~~i~~Al~~Gin~~DTA~~YgsE~~vG~al~~~~~~~~~~~r~~~~~~~~~~~ 82 (324)
T 4gac_A 3 SSVLLHTGQKMPLIGLGTWKSEPGQVKAAIKHALSAGYRHIDCASVYGNETEIGEALKESVGSGKAVPREELFVTSKLWN 82 (324)
T ss_dssp CEEECTTSCEEESBCEECTTCCHHHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHHBSTTSSBCGGGCEEEEEECG
T ss_pred CeEECCCCCEeccceeECCCCCHHHHHHHHHHHHHcCCCEEECCcccCCHHHHHHHHHhhhcccceecccccccccccCC
Confidence 4789999999999999999999999999999999999999999999999999999999876554 257899999999976
Q ss_pred C--ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEE
Q 029874 80 S--DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSI 157 (186)
Q Consensus 80 ~--~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i 157 (186)
. +++.+++++++||++||+||||+|++|||+.... .+...+.+.++.. .....+++++|++|++|+++|+||+|
T Consensus 83 ~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~---~~~~~~~~~~~~~-~~~~~~~~e~~~al~~l~~~Gkir~i 158 (324)
T 4gac_A 83 TKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFER---GDNPFPKNADGTV-RYDSTHYKETWKALEVLVAKGLVKAL 158 (324)
T ss_dssp GGCSHHHHHHHHHHHHHHHTCSCBSEEEESCSSEECS---SSCSSCBCTTSCB-CEECCCHHHHHHHHHHHHHTTSBSCE
T ss_pred CCCCHHHHHHHHHHHHHHhCCCccceeeeccCccccc---ccccccccccCcc-ccCCCCHHHHHHHHHHHHHCCCeeEe
Confidence 4 7899999999999999999999999999976432 2222222222222 12245689999999999999999999
Q ss_pred EecCCCchhHhhHHhhccCCC
Q 029874 158 GIRYVGILNPCEHSIRSSKFS 178 (186)
Q Consensus 158 Gvsn~~~~~l~~~~~~~~~~~ 178 (186)
|+|||+.+++.+ +.....+.
T Consensus 159 GvSn~~~~~l~~-~~~~~~~~ 178 (324)
T 4gac_A 159 GLSNFNSRQIDD-VLSVASVR 178 (324)
T ss_dssp EEESCCHHHHHH-HHHHCSSC
T ss_pred cCCCCCHHHHHH-HHHhCCCC
Confidence 999999999544 44444444
No 12
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1
Probab=100.00 E-value=2.1e-39 Score=265.62 Aligned_cols=150 Identities=43% Similarity=0.747 Sum_probs=134.4
Q ss_pred eeecCCCCcCCccccccccCCchhHHHHHHHHHHhCCceEeCCCCCCCHHHHHHHHHHHhhcCCccccceEEEeccCCC-
Q 029874 2 AITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNS- 80 (186)
Q Consensus 2 ~~~~~tg~~v~~lglG~~~~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~~- 80 (186)
+..|+||.+||+||||||+++.+++.+++..|+++|||+||||+.||+|..+|++|+..+..+.++|++++|+||+|..
T Consensus 17 ~~~~~tg~~v~~lglGt~~~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~vG~al~~~~~~~~~~R~~v~I~TK~~~~~ 96 (298)
T 1vp5_A 17 KVTLNNGVEMPILGYGVFQIPPEKTEECVYEAIKVGYRLIDTAASYMNEEGVGRAIKRAIDEGIVRREELFVTTKLWVSD 96 (298)
T ss_dssp EEECTTSCEEESBCEECTTCCHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSCCGGGCEEEEEECGGG
T ss_pred eEeCCCCCCccCeeEeCCcCChHHHHHHHHHHHHcCCCEEECCCcccCHHHHHHHHHHhhhccCCChhhEEEEeccCCCC
Confidence 5689999999999999999998899999999999999999999999999999999998665555789999999999854
Q ss_pred -ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEEe
Q 029874 81 -DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGI 159 (186)
Q Consensus 81 -~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv 159 (186)
+++.+++++++||++||+||+|+|++|||+. +..++|++|++|+++|+||+|||
T Consensus 97 ~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~-------------------------~~~e~~~al~~l~~~Gkir~iGv 151 (298)
T 1vp5_A 97 VGYESTKKAFEKSLKKLQLEYIDLYLIHQPFG-------------------------DVHCAWKAMEEMYKDGLVRAIGV 151 (298)
T ss_dssp CSSHHHHHHHHHHHHHHTCSCEEEEEECSSCS-------------------------CHHHHHHHHHHHHHTTSEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHCCCcEEEEEecCCCC-------------------------CHHHHHHHHHHHHHcCCccEEEe
Confidence 7899999999999999999999999999843 26789999999999999999999
Q ss_pred cCCCchhHhhHHhhccCC
Q 029874 160 RYVGILNPCEHSIRSSKF 177 (186)
Q Consensus 160 sn~~~~~l~~~~~~~~~~ 177 (186)
|||+.+++.+ +++...+
T Consensus 152 Sn~~~~~l~~-~~~~~~~ 168 (298)
T 1vp5_A 152 SNFYPDRLMD-LMVHHEI 168 (298)
T ss_dssp ESCCHHHHHH-HHHHCSS
T ss_pred cCCCHHHHHH-HHHhCCC
Confidence 9999998544 4444433
No 13
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=100.00 E-value=3.2e-39 Score=268.27 Aligned_cols=172 Identities=37% Similarity=0.635 Sum_probs=137.1
Q ss_pred eeecCCCCcCCccccccccCCchhHHHHHHHHHHhCCceEeCCCCCCCHHHHHHHHHHHhhc---CCccccceEEEeccC
Q 029874 2 AITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFST---GLVKREDLFITTKLW 78 (186)
Q Consensus 2 ~~~~~tg~~v~~lglG~~~~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~---~~~~R~~~~i~tK~~ 78 (186)
++..+||.+||+||||||+++.+++.++|..|+++|||+||||+.||||..+|++|++.+.. | ++|++++|+||+|
T Consensus 16 ~~~~~tg~~vp~lGlGt~~~~~~~~~~~v~~Al~~Gi~~~DTA~~YgsE~~vG~al~~~~~~~~~g-~~R~~v~I~TK~~ 94 (334)
T 3krb_A 16 TQGPGSMQYPPRLGFGTWQAPPEAVQTAVETALMTGYRHIDCAYVYQNEEAIGRAFGKIFKDASSG-IKREDVWITSKLW 94 (334)
T ss_dssp -----CCSSCCSBCEECTTCCHHHHHHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHHHHHCTTSS-CCGGGCEEEEEEC
T ss_pred CcCCCCCCccCCeeeeCCCCCHHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHHhhhccCC-CChhhEEEEeeeC
Confidence 46678999999999999999999999999999999999999999999999999999977666 5 7899999999998
Q ss_pred CC--ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccE
Q 029874 79 NS--DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRS 156 (186)
Q Consensus 79 ~~--~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~ 156 (186)
.. +++.+++++++||++||+||||+|++|||......+ +.+..+.+.++.. .....++.++|++|++|+++|+||+
T Consensus 95 ~~~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~-~~~~~~~d~~g~~-~~~~~~~~e~~~al~~l~~~Gkir~ 172 (334)
T 3krb_A 95 NYNHRPELVREQCKKTMSDLQVDYLDLFLVHWPLAFVRND-VGDLFPKDAEGRA-MLEKVPLADTWRAMEQLVEEGLVKH 172 (334)
T ss_dssp GGGCSGGGHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCT-TCCSSCBCTTSCB-CBCCCCHHHHHHHHHHHHHHTSEEE
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCceeEEEEcccccccccc-ccccCcccccccc-cccCCCHHHHHHHHHHHHHcCCccE
Confidence 64 789999999999999999999999999996542100 1112222222111 1122468899999999999999999
Q ss_pred EEecCCCchhHhhHHhhccCC
Q 029874 157 IGIRYVGILNPCEHSIRSSKF 177 (186)
Q Consensus 157 iGvsn~~~~~l~~~~~~~~~~ 177 (186)
||||||+.+++ +.+++...+
T Consensus 173 iGvSn~~~~~l-~~~~~~~~~ 192 (334)
T 3krb_A 173 IGVSNYTVPLL-ADLLNYAKI 192 (334)
T ss_dssp EEEESCCHHHH-HHHHHHCSS
T ss_pred EEEecCCHHHH-HHHHHhCCC
Confidence 99999999885 445555544
No 14
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar}
Probab=100.00 E-value=1.8e-39 Score=264.30 Aligned_cols=149 Identities=40% Similarity=0.692 Sum_probs=132.5
Q ss_pred eeecCCCCcCCccccccccCCchhHHHHHHHHHHhCCceEeCCCCCCCHHHHHHHHHHHhhcCCccccceEEEeccCCC-
Q 029874 2 AITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNS- 80 (186)
Q Consensus 2 ~~~~~tg~~v~~lglG~~~~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~~- 80 (186)
++.+++|.+||+||||||+++.+++.++++.|+++|||+||||+.||+|..+|++|++. + ++|++++|+||+|..
T Consensus 28 ~~~L~~g~~v~~lglGt~~~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~---~-~~R~~~~i~TK~~~~~ 103 (283)
T 3o0k_A 28 TVKLNDGNHIPQLGYGVWQISNDEAVSAVSEALKAGYRHIDTATIYGNEEGVGKAINGS---G-IARADIFLTTKLWNSD 103 (283)
T ss_dssp EEECTTSCEEESBCEECCSCCHHHHHHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHTS---S-SCGGGCEEEEEECGGG
T ss_pred eEECCCCCEECCeeEECccCCHHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHc---C-CCcccEEEEEccCCCC
Confidence 45679999999999999999999999999999999999999999999999999999973 3 689999999999864
Q ss_pred -ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEEe
Q 029874 81 -DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGI 159 (186)
Q Consensus 81 -~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv 159 (186)
+++.+++++++||++||+||||+|++|||+.. ..+..++|++|++|+++|+||+|||
T Consensus 104 ~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~----------------------~~~~~e~~~al~~l~~~Gkir~iGv 161 (283)
T 3o0k_A 104 QGYESTLKAFDTSLKKLGTDYVDLYLIHWPMPS----------------------KDLFMETWRAFIKLKEEGRVKSIGV 161 (283)
T ss_dssp CSHHHHHHHHHHHHHHHTSSCEEEEEECCSCSC----------------------HHHHHHHHHHHHHHHHTTSEEEEEE
T ss_pred CCHHHHHHHHHHHHHHhCCCceeEEEECCCCCC----------------------cccHHHHHHHHHHHHHCCCcceEEe
Confidence 78999999999999999999999999999643 0236789999999999999999999
Q ss_pred cCCCchhHhhHHhhccCC
Q 029874 160 RYVGILNPCEHSIRSSKF 177 (186)
Q Consensus 160 sn~~~~~l~~~~~~~~~~ 177 (186)
|||+.+++.+.+ +...+
T Consensus 162 Sn~~~~~l~~~~-~~~~~ 178 (283)
T 3o0k_A 162 SNFRTADLERLI-KESGV 178 (283)
T ss_dssp ESCCHHHHHHHH-HHHSC
T ss_pred ccCcHHHHHHHH-HhCCC
Confidence 999999965544 43333
No 15
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A*
Probab=100.00 E-value=4.6e-39 Score=261.25 Aligned_cols=149 Identities=40% Similarity=0.688 Sum_probs=129.2
Q ss_pred eeecCCCCcCCccccccccCCchhHHHHHHHHHHhCCceEeCCCCCCCHHHHHHHHHHHhhcCCccccceEEEeccCCC-
Q 029874 2 AITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNS- 80 (186)
Q Consensus 2 ~~~~~tg~~v~~lglG~~~~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~~- 80 (186)
+..++||.+||+||||||+++.+++.+++..|+++|||+||||+.||+|..+|++|++. + ++|++++|+||+|..
T Consensus 5 ~~~l~~g~~v~~lglGt~~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~---~-~~R~~~~i~TK~~~~~ 80 (278)
T 1hw6_A 5 SIVLNDGNSIPQLGYGVFKVPPADTQRAVEEALEVGYRHIDTAAIYGNEEGVGAAIAAS---G-IARDDLFITTKLWNDR 80 (278)
T ss_dssp EEECTTSCEEESBCEECCSCCGGGHHHHHHHHHHHTCCEEECGGGTTCCHHHHHHHHHH---C-CCGGGCEEEEEECCC-
T ss_pred eEECCCCCccCCeeEECCcCChHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHc---C-CChhhEEEEEeeCCCC
Confidence 34569999999999999999888999999999999999999999999999999999974 4 689999999999864
Q ss_pred -ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEEe
Q 029874 81 -DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGI 159 (186)
Q Consensus 81 -~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv 159 (186)
+++.+++++++||++||+||+|+|++|||+.. ..+..++|++|++|+++|+||+|||
T Consensus 81 ~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~----------------------~~~~~e~~~al~~l~~~Gkir~iGv 138 (278)
T 1hw6_A 81 HDGDEPAAAIAESLAKLALDQVDLYLVHWPTPA----------------------ADNYVHAWEKMIELRAAGLTRSIGV 138 (278)
T ss_dssp ----CHHHHHHHHHHHHTCSCEEEEEECCCCTT----------------------CSSHHHHHHHHHHHHHTTSEEEEEE
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEEEEcCCCCC----------------------CCCHHHHHHHHHHHHHcCCccEEEe
Confidence 68999999999999999999999999998542 1236789999999999999999999
Q ss_pred cCCCchhHhhHHhhccCC
Q 029874 160 RYVGILNPCEHSIRSSKF 177 (186)
Q Consensus 160 sn~~~~~l~~~~~~~~~~ 177 (186)
|||+.+++.+ +++...+
T Consensus 139 Sn~~~~~l~~-~~~~~~~ 155 (278)
T 1hw6_A 139 SNHLVPHLER-IVAATGV 155 (278)
T ss_dssp ESCCHHHHHH-HHHHHSC
T ss_pred cCCCHHHHHH-HHHhcCC
Confidence 9999998544 4444433
No 16
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=100.00 E-value=9.9e-39 Score=259.02 Aligned_cols=148 Identities=41% Similarity=0.743 Sum_probs=131.3
Q ss_pred eeecCCCCcCCccccccccCC-chhHHHHHHHHHHhCCceEeCCCCCCCHHHHHHHHHHHhhcCCccccceEEEeccCCC
Q 029874 2 AITLNNGFKMPIIGLGVWRMD-ESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNS 80 (186)
Q Consensus 2 ~~~~~tg~~v~~lglG~~~~~-~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~~ 80 (186)
+..++||.+||+||||||+++ .+++.++++.|+++|+|+||||+.||+|..+|++|++. + ++|++++|+||+|..
T Consensus 8 ~~~L~~g~~v~~lglGt~~~~~~~~~~~~l~~Al~~G~~~~DTA~~Yg~E~~lG~al~~~---~-~~R~~~~i~TK~~~~ 83 (276)
T 3f7j_A 8 TVKLHNGVEMPWFGLGVFKVENGNEATESVKAAIKNGYRSIDTAAIYKNEEGVGIGIKES---G-VAREELFITSKVWNE 83 (276)
T ss_dssp EEECTTSCEEESBCEECTTCCTTHHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHH---C-SCGGGCEEEEEECGG
T ss_pred eEECCCCCEecceeecCCcCCCHHHHHHHHHHHHHcCCCEEECcCcccCHHHHHHHHhhc---C-CCcccEEEEEeeCCC
Confidence 456779999999999999985 58899999999999999999999999999999999974 4 689999999999874
Q ss_pred --ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEE
Q 029874 81 --DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIG 158 (186)
Q Consensus 81 --~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iG 158 (186)
+++.+++++++||++||+||+|+|++|||+.. ...++|++|++|+++|+||+||
T Consensus 84 ~~~~~~v~~~~~~SL~rLg~dyiDl~~lH~p~~~------------------------~~~~~~~~l~~l~~~Gkir~iG 139 (276)
T 3f7j_A 84 DQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKD------------------------KYKDTWRALEKLYKDGKIRAIG 139 (276)
T ss_dssp GCSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSS------------------------SHHHHHHHHHHHHHTTSEEEEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCeeEEEEEecCCCC------------------------cHHHHHHHHHHHHHcCCccEEE
Confidence 78999999999999999999999999998643 1578999999999999999999
Q ss_pred ecCCCchhHhhHHhhccCCC
Q 029874 159 IRYVGILNPCEHSIRSSKFS 178 (186)
Q Consensus 159 vsn~~~~~l~~~~~~~~~~~ 178 (186)
||||+.+++. .+++...++
T Consensus 140 vSn~~~~~l~-~~~~~~~~~ 158 (276)
T 3f7j_A 140 VSNFQVHHLE-ELLKDAEIK 158 (276)
T ss_dssp EESCCHHHHH-HHHHHCSSC
T ss_pred eccCCHHHHH-HHHHhcCCC
Confidence 9999999954 455544444
No 17
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A*
Probab=100.00 E-value=8.5e-39 Score=260.82 Aligned_cols=153 Identities=41% Similarity=0.673 Sum_probs=132.0
Q ss_pred eeecCCCCcCCccccccccCC-chhHHHHHHHHHHhCCceEeCCCCCCCHHHHHHHHHHHhhcCCccccceEEEeccCCC
Q 029874 2 AITLNNGFKMPIIGLGVWRMD-ESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNS 80 (186)
Q Consensus 2 ~~~~~tg~~v~~lglG~~~~~-~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~~ 80 (186)
+++++||.+||+||||||+++ .+++.++++.|+++|||+||||+.||+|..+|++|+.. + ++|++++|+||+|..
T Consensus 12 ~~~l~~g~~v~~lglGt~~~~~~~~~~~~v~~Al~~G~~~~DTA~~Yg~E~~vG~al~~~---~-~~R~~~~I~TK~~~~ 87 (288)
T 4f40_A 12 MVTLSNGVKMPQFGLGVWQSPAGEVTENAVKWALCAGYRHIDTAAIYKNEESVGAGLRAS---G-VPREDVFITTKLWNT 87 (288)
T ss_dssp EEECTTSCEEESBCEECTTCCTTHHHHHHHHHHHHTTCCEEECCGGGTCHHHHHHHHHHH---T-CCGGGCEEEEEECGG
T ss_pred eEECCCCCeecceeEECCcCCCcHHHHHHHHHHHHcCCCeEECcccccCHHHHHHHHHhc---C-CChhhEEEEEecCCC
Confidence 678999999999999999987 48899999999999999999999999999999999974 4 689999999999865
Q ss_pred --ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEE
Q 029874 81 --DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIG 158 (186)
Q Consensus 81 --~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iG 158 (186)
+++.+++++++||++||+||+|+|++|||+...+ . .....+..++|++|++|+++|+||+||
T Consensus 88 ~~~~~~i~~~~~~SL~rLg~dyiDl~llH~p~~~~~---------------~-~~~~~~~~e~~~al~~l~~~Gkir~iG 151 (288)
T 4f40_A 88 EQGYESTLAAFEESRQKLGVDYIDLYLIHWPRGKDI---------------L-SKEGKKYLDSWRAFEQLYKEKKVRAIG 151 (288)
T ss_dssp GCSHHHHHHHHHHHHHHHTCSCEEEEEECCCCCHHH---------------H-HHHCCHHHHHHHHHHHHHHTTSEEEEE
T ss_pred cCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCCCcc---------------c-ccccccHHHHHHHHHHHHHcCCccEEE
Confidence 6799999999999999999999999999964310 0 001134788999999999999999999
Q ss_pred ecCCCchhHhhHHhhcc
Q 029874 159 IRYVGILNPCEHSIRSS 175 (186)
Q Consensus 159 vsn~~~~~l~~~~~~~~ 175 (186)
||||+.+++.+ +++..
T Consensus 152 vSn~~~~~l~~-~~~~~ 167 (288)
T 4f40_A 152 VSNFHIHHLED-VLAMC 167 (288)
T ss_dssp EESCCHHHHHH-HHTTC
T ss_pred eccCCHHHHHH-HHHhC
Confidence 99999998544 44433
No 18
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa}
Probab=100.00 E-value=1.3e-38 Score=262.28 Aligned_cols=163 Identities=39% Similarity=0.705 Sum_probs=134.3
Q ss_pred cCC--CCcCCcccccc--ccCCchhHHHHHHHHHHhCCceEeCCCCCCCHHHHHHHHHHHhhcCCccccceEEEeccCCC
Q 029874 5 LNN--GFKMPIIGLGV--WRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNS 80 (186)
Q Consensus 5 ~~t--g~~v~~lglG~--~~~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~~ 80 (186)
+++ |.+||+||||| |+.+.+++.++++.|+++|||+||||+.||||..+|++|++.+..|.++|++++|+||+|..
T Consensus 12 l~~~tg~~v~~lglGt~~~~~~~~~~~~~v~~Al~~G~~~iDTA~~YgsE~~vG~al~~~~~~g~~~R~~~~i~TK~~~~ 91 (312)
T 1zgd_A 12 TNTSSQLKMPVVGMGSAPDFTCKKDTKDAIIEAIKQGYRHFDTAAAYGSEQALGEALKEAIELGLVTRDDLFVTSKLWVT 91 (312)
T ss_dssp TTSTTCCEEESBCBCCSCCTTCCSCHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSCCGGGCEEEEEECGG
T ss_pred cCCCCCCCCCceeEcCcccCCCHHHHHHHHHHHHHcCCCEEECccccCCHHHHHHHHHHHHhcCCCcchheEEEeccCCC
Confidence 555 99999999999 88888899999999999999999999999999999999998776676789999999999864
Q ss_pred --ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEE
Q 029874 81 --DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIG 158 (186)
Q Consensus 81 --~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iG 158 (186)
+++.+++++++||++||++|||+|++|||+...+ ++...+.+.+. . ...+..++|++|++|+++|+||+||
T Consensus 92 ~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~---~~~~~~~~~~~---~-~~~~~~e~~~ale~l~~~Gkir~iG 164 (312)
T 1zgd_A 92 ENHPHLVIPALQKSLKTLQLDYLDLYLIHWPLSSQP---GKFSFPIDVAD---L-LPFDVKGVWESMEESLKLGLTKAIG 164 (312)
T ss_dssp GCSGGGHHHHHHHHHHHHTCSCBSEEEECCSCEECT---TCCCSSEEGGG---E-ECCCHHHHHHHHHHHHHTTSBSCEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCceeEEEEeccCcccC---ccccccccccc---c-ccccHHHHHHHHHHHHHcCCCCEEE
Confidence 7899999999999999999999999999965321 00000100000 0 0234789999999999999999999
Q ss_pred ecCCCchhHhhHHhhcc
Q 029874 159 IRYVGILNPCEHSIRSS 175 (186)
Q Consensus 159 vsn~~~~~l~~~~~~~~ 175 (186)
||||+.+++. .+++..
T Consensus 165 vSn~~~~~l~-~~~~~~ 180 (312)
T 1zgd_A 165 VSNFSVKKLE-NLLSVA 180 (312)
T ss_dssp EESCCHHHHH-HHHTTC
T ss_pred EeCCCHHHHH-HHHHhC
Confidence 9999999854 445444
No 19
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.3e-38 Score=260.91 Aligned_cols=143 Identities=36% Similarity=0.670 Sum_probs=129.2
Q ss_pred eeecCCCCcCCccccccccCCchhHHHHHHHHHHhCCceEeCCCCCCCHHHHHHHHHHHhhcCCccccceEEEeccCCC-
Q 029874 2 AITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNS- 80 (186)
Q Consensus 2 ~~~~~tg~~v~~lglG~~~~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~~- 80 (186)
+..++ |.+||+||||||+++.+++.+++..|+++|||+||||+.||||..+|++|++. + ++|++++|+||+|..
T Consensus 26 ~~~l~-g~~v~~lglGt~~~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~---~-~~R~~v~I~TK~~~~~ 100 (298)
T 3up8_A 26 AVSSN-GANIPALGFGTFRMSGAEVLRILPQALKLGFRHVDTAQIYGNEAEVGEAIQKS---G-IPRADVFLTTKVWVDN 100 (298)
T ss_dssp EECCT-TCCEESEEEECTTCCHHHHHHHHHHHHHHTCCEEECCTTTTCHHHHHHHHHHH---T-CCGGGCEEEEEECGGG
T ss_pred eEEeC-CeecCCeeEECCcCCHHHHHHHHHHHHHcCCCEEECCCcccCHHHHHHHHHHc---C-CChHHEEEEeccCCCC
Confidence 34556 99999999999999999999999999999999999999999999999999985 4 689999999999854
Q ss_pred -ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEEe
Q 029874 81 -DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGI 159 (186)
Q Consensus 81 -~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv 159 (186)
+++.+++++++||++||+||+|+|++|||+.. .+..++|++|++|+++|+||+|||
T Consensus 101 ~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~-----------------------~~~~e~~~al~~l~~~Gkir~iGv 157 (298)
T 3up8_A 101 YRHDAFIASVDESLRKLRTDHVDLLLLHWPGSD-----------------------VPMAERIGALNEVRNAGKVRHIGI 157 (298)
T ss_dssp CSHHHHHHHHHHHHHHHTSSCEEEEEESCSCCS-----------------------SCHHHHHHHHHHHHHTTSEEEEEE
T ss_pred CCHHHHHHHHHHHHHHhCCCcEEEEEEccCCCC-----------------------CCHHHHHHHHHHHHHcCCccEEEE
Confidence 78999999999999999999999999999653 136899999999999999999999
Q ss_pred cCCCchhHhhHHh
Q 029874 160 RYVGILNPCEHSI 172 (186)
Q Consensus 160 sn~~~~~l~~~~~ 172 (186)
|||+.+++.+.+-
T Consensus 158 Sn~~~~~l~~~~~ 170 (298)
T 3up8_A 158 SNFNTTQMEEAAR 170 (298)
T ss_dssp ESCCHHHHHHHHH
T ss_pred cCCCHHHHHHHHH
Confidence 9999998555443
No 20
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A
Probab=100.00 E-value=7e-39 Score=260.79 Aligned_cols=149 Identities=35% Similarity=0.624 Sum_probs=131.2
Q ss_pred eeecCCCCcCCccccccccCCchhHHHHHHHHHHhCCceEeCCCCCCCHHHHHHHHHHHhhcCCccccceEEEeccCCC-
Q 029874 2 AITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNS- 80 (186)
Q Consensus 2 ~~~~~tg~~v~~lglG~~~~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~~- 80 (186)
+..++||.+||+||||||+++.+++.++++.|+++|||+||||+.||+|..+|++|++. + ++|++++|+||+|..
T Consensus 13 ~~~l~~g~~v~~lglGt~~~~~~~~~~~v~~Al~~Gi~~iDTA~~Yg~E~~lG~al~~~---~-~~R~~v~i~TK~~~~~ 88 (283)
T 2wzm_A 13 TVTLNDDNTLPVVGIGVGELSDSEAERSVSAALEAGYRLIDTAAAYGNEAAVGRAIAAS---G-IPRDEIYVTTKLATPD 88 (283)
T ss_dssp EEECTTSCEEESEEEECTTCCHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHT---C-CCGGGCEEEEEECGGG
T ss_pred eEECCCCCEEcceeEECCCCChHHHHHHHHHHHHcCCCEEECCCcccCHHHHHHHHHhc---C-CCcccEEEEeccCCCC
Confidence 45669999999999999999888899999999999999999999999999999999973 3 689999999999864
Q ss_pred -ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEEe
Q 029874 81 -DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGI 159 (186)
Q Consensus 81 -~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv 159 (186)
+++.+++++++||++||+||+|+|++|||+.. ..+..++|++|++|+++|+||+|||
T Consensus 89 ~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~----------------------~~~~~e~~~al~~l~~~Gkir~iGv 146 (283)
T 2wzm_A 89 QGFTSSQAAARASLERLGLDYVDLYLIHWPGGD----------------------TSKYVDSWGGLMKVKEDGIARSIGV 146 (283)
T ss_dssp CSHHHHHHHHHHHHHHHTCSCEEEEEECCCTTC----------------------HHHHHHHHHHHHHHHHTTSEEEEEE
T ss_pred CCHHHHHHHHHHHHHHhCCCCEeEEEEcCCCCC----------------------CCCHHHHHHHHHHHHHcCCccEEEE
Confidence 78999999999999999999999999998542 1236789999999999999999999
Q ss_pred cCCCchhHhhHHhhccCC
Q 029874 160 RYVGILNPCEHSIRSSKF 177 (186)
Q Consensus 160 sn~~~~~l~~~~~~~~~~ 177 (186)
|||+.+++.+ +++...+
T Consensus 147 Sn~~~~~l~~-~~~~~~~ 163 (283)
T 2wzm_A 147 CNFGAEDLET-IVSLTYF 163 (283)
T ss_dssp ESCCHHHHHH-HHHHHCC
T ss_pred cCCCHHHHHH-HHHhcCC
Confidence 9999988544 4444433
No 21
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=100.00 E-value=9.7e-39 Score=263.40 Aligned_cols=159 Identities=41% Similarity=0.684 Sum_probs=140.3
Q ss_pred eeecCCCCcCCccccccccCC-chhHHHHHHHHHHhCCceEeCCCCCCCHHHHHHHHHHHhhcCCccccceEEEeccCCC
Q 029874 2 AITLNNGFKMPIIGLGVWRMD-ESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNS 80 (186)
Q Consensus 2 ~~~~~tg~~v~~lglG~~~~~-~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~~ 80 (186)
+..++||++||.||||||+++ .+++.++|+.|+++|||+||||+.||||..+|+++++.+....+.|+++++++|+|..
T Consensus 42 ~~TLn~G~~ip~lGlGt~~~~d~~e~~~~v~~Al~~Gi~~~DTA~~YgnE~~vG~~l~~~~~~~~i~r~~~~i~~k~~~~ 121 (314)
T 3b3d_A 42 KATLHNGVEMPWFGLGVFQVEEGSELVNAVKTAIVHGYRSIDTAAIYGNEAGVGEGIREGIEEAGISREDLFITSKVWNA 121 (314)
T ss_dssp EEECTTSCEEESBCEECCSCCCSHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHHHTCCGGGCEEEEEECGG
T ss_pred cEECCCcCcccceeEECCCCCCHHHHHHHHHHHHHcCCCEEECccccCChHHHHHHHHHHHHHhCCCcccccccccCcCC
Confidence 456899999999999999984 5789999999999999999999999999999999998777666899999999999865
Q ss_pred --ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEE
Q 029874 81 --DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIG 158 (186)
Q Consensus 81 --~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iG 158 (186)
+++.+++++++||++||+||||+|++|||+.. ...++|++|++|+++|+||+||
T Consensus 122 ~~~~~~~~~~~e~SL~rL~~dyiDL~~~H~~~~~------------------------~~~e~~~al~~l~~~Gkir~iG 177 (314)
T 3b3d_A 122 DLGYEETLAAFETSLSKLGLDYLDLYLIHWPVEG------------------------KYKEAWRALETLYKEGRIKAIG 177 (314)
T ss_dssp GCSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTT------------------------THHHHHHHHHHHHHTTSEEEEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCccccccccccccc------------------------chhHHHHHHHHHHHCCCEeEEE
Confidence 78999999999999999999999999998643 2568999999999999999999
Q ss_pred ecCCCchhHhhHHhhccCCCCCcceee
Q 029874 159 IRYVGILNPCEHSIRSSKFSTKFIIVT 185 (186)
Q Consensus 159 vsn~~~~~l~~~~~~~~~~~~~~~~~~ 185 (186)
||||+.++ ++.+++...+..+...|+
T Consensus 178 vSn~~~~~-l~~~~~~~~i~~~~nq~~ 203 (314)
T 3b3d_A 178 VSNFQIHH-LEDLMTAAEIKPMINQVE 203 (314)
T ss_dssp EESCCHHH-HHHHTTTCSSCCSEEEEE
T ss_pred ecCCchHH-HHHHHHhcCCCeEEEEec
Confidence 99999999 455666667766555554
No 22
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana}
Probab=100.00 E-value=9e-39 Score=265.33 Aligned_cols=162 Identities=40% Similarity=0.683 Sum_probs=135.0
Q ss_pred eeecCCCCcCCccccccccCCchhHHHHHHHHHHhCCceEeCCCCCCCHHHHHHHHHHHhhcCCccccceEEEeccCCC-
Q 029874 2 AITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNS- 80 (186)
Q Consensus 2 ~~~~~tg~~v~~lglG~~~~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~~- 80 (186)
++.++||.+||+||||||+ ++.++|..|+++|||+||||+.||+|..+|++|++.+..|.++|++++|+||+|..
T Consensus 27 ~~~L~tg~~vs~lglGt~~----~~~~~v~~Al~~Gi~~~DTA~~YgsE~~lG~al~~~~~~g~~~R~~v~I~TK~~~~~ 102 (331)
T 3h7r_A 27 FFELNTGAKLPCVGLGTYA----MVATAIEQAIKIGYRHIDCASIYGNEKEIGGVLKKLIGDGFVKREELFITSKLWSND 102 (331)
T ss_dssp EEECTTSCEEESBEEECTT----CCHHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHHHHHTTSSCGGGCEEEEEECGGG
T ss_pred EEECCCCCEecCEeeccHH----HHHHHHHHHHHcCCCEEECccccCCHHHHHHHHHHHhhcCCCCchhEEEEEeeCCCC
Confidence 5677999999999999997 77899999999999999999999999999999999877776689999999999865
Q ss_pred -ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEEe
Q 029874 81 -DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGI 159 (186)
Q Consensus 81 -~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv 159 (186)
+++.+++++++||++||+||||+|++|||+...+. . ..+ +++. ....+..++|++|++|+++|+||+|||
T Consensus 103 ~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~---~-~~~-~~~~----~~~~~~~e~~~aL~~l~~~Gkir~iGv 173 (331)
T 3h7r_A 103 HLPEDVPKALEKTLQDLQIDYVDLYLIHWPASLKKE---S-LMP-TPEM----LTKPDITSTWKAMEALYDSGKARAIGV 173 (331)
T ss_dssp CSTTHHHHHHHHHHHHHTCSCBSEEEECCSCEECTT---C-SSC-CGGG----EECCCHHHHHHHHHHHHHTTSBSSEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCeeEEEEEecCcccccc---c-ccc-cccc----cccCCHHHHHHHHHHHHHcCCCcEEEe
Confidence 67999999999999999999999999999754221 0 001 0000 012457899999999999999999999
Q ss_pred cCCCchhHhhHHhhccCC
Q 029874 160 RYVGILNPCEHSIRSSKF 177 (186)
Q Consensus 160 sn~~~~~l~~~~~~~~~~ 177 (186)
|||+.+++.+ +++...+
T Consensus 174 Sn~~~~~l~~-~~~~~~~ 190 (331)
T 3h7r_A 174 SNFSSKKLTD-LLNVARV 190 (331)
T ss_dssp ESCCHHHHHH-HHHHCSS
T ss_pred cCCCHHHHHH-HHHhcCC
Confidence 9999998544 4444443
No 23
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=1.1e-38 Score=261.05 Aligned_cols=144 Identities=48% Similarity=0.785 Sum_probs=129.6
Q ss_pred eeecCCCCcCCccccccccCCchhHHHHHHHHHHhCCceEeCCCCCCCHHHHHHHHHHHhhcCCccccceEEEeccCCCC
Q 029874 2 AITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSD 81 (186)
Q Consensus 2 ~~~~~tg~~v~~lglG~~~~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~~~ 81 (186)
++.++||.+||+||||||+++.+++.++++.|+++|||+||||+.||+|..+|++|++. + ++|++++|+||+|..+
T Consensus 27 ~~~L~tg~~vs~lglGt~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~E~~vG~al~~~---~-~~R~~v~I~TK~~~~~ 102 (296)
T 1mzr_A 27 VIKLQDGNVMPQLGLGVWQASNEEVITAIQKALEVGYRSIDTAAAYKNEEGVGKALKNA---S-VNREELFITTKLWNDD 102 (296)
T ss_dssp EEECTTSCEEESBCEECCSCCHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHS---C-SCGGGCEEEEEECGGG
T ss_pred eEECCCCCeeCCEeEECCCCCHHHHHHHHHHHHHcCCCEEECCccccCHHHHHHHHHhc---C-CCcccEEEEeccCCCc
Confidence 45678999999999999999989999999999999999999999999999999999972 3 6899999999998765
Q ss_pred hhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEEecC
Q 029874 82 HGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGIRY 161 (186)
Q Consensus 82 ~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvsn 161 (186)
.+.+++++++||++||+||+|+|++|||+.. ..+..++|++|++|+++|+||+|||||
T Consensus 103 ~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~----------------------~~~~~e~~~al~~l~~~Gkir~iGvSn 160 (296)
T 1mzr_A 103 HKRPREALLDSLKKLQLDYIDLYLMHWPVPA----------------------IDHYVEAWKGMIELQKEGLIKSIGVCN 160 (296)
T ss_dssp TTCHHHHHHHHHHHHTCSCEEEEEESCCCTT----------------------TCCHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEccCCCC----------------------cCCHHHHHHHHHHHHHCCCcCEEEEeC
Confidence 6899999999999999999999999998542 123678999999999999999999999
Q ss_pred CCchhHhhHH
Q 029874 162 VGILNPCEHS 171 (186)
Q Consensus 162 ~~~~~l~~~~ 171 (186)
|+.+++.+.+
T Consensus 161 ~~~~~l~~~~ 170 (296)
T 1mzr_A 161 FQIHHLQRLI 170 (296)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 9999855444
No 24
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=2.3e-38 Score=257.50 Aligned_cols=146 Identities=43% Similarity=0.760 Sum_probs=129.3
Q ss_pred eeecCCCCcCCccccccccCCc-hhHHHHHHHHHHhCCceEeCCCCCCCHHHHHHHHHHHhhcCCccccceEEEeccCCC
Q 029874 2 AITLNNGFKMPIIGLGVWRMDE-SNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNS 80 (186)
Q Consensus 2 ~~~~~tg~~v~~lglG~~~~~~-~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~~ 80 (186)
+..++||.+||+||||||+++. +++.+++..|+++|||+||||+.||+|..+|++|++. + ++|++++|+||+|..
T Consensus 11 ~~~l~~g~~v~~lglGt~~~~~~~~~~~~v~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~---~-~~R~~~~i~TK~~~~ 86 (281)
T 1vbj_A 11 SLKLSNGVMMPVLGFGMWKLQDGNEAETATMWAIKSGYRHIDTAAIYKNEESAGRAIASC---G-VPREELFVTTKLWNS 86 (281)
T ss_dssp EEECTTSCEEESBCEECTTCCTTHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHS---S-SCGGGCEEEEEECGG
T ss_pred eEECCCCCeecCeeEECCcCCCHHHHHHHHHHHHHcCCCEEECCcccCCHHHHHHHHHhc---C-CChhHEEEEeccCCC
Confidence 4566899999999999999865 7889999999999999999999999999999999973 3 689999999999854
Q ss_pred --ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEE
Q 029874 81 --DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIG 158 (186)
Q Consensus 81 --~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iG 158 (186)
+++.+++++++||++||+||+|+|++|||+ . .+..++|++|++|+++|+||+||
T Consensus 87 ~~~~~~v~~~~~~SL~rL~~dyiDl~~lH~p~-~-----------------------~~~~~~~~al~~l~~~Gkir~iG 142 (281)
T 1vbj_A 87 DQGYESTLSAFEKSIKKLGLEYVDLYLIHWPG-K-----------------------DKFIDTWKAFEKLYADKKVRAIG 142 (281)
T ss_dssp GCSHHHHHHHHHHHHHHHTCSCBSEEEESCCC-S-----------------------SCHHHHHHHHHHHHHTTSBSCEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCcEEEEEEcCCC-C-----------------------CCHHHHHHHHHHHHHCCCccEEE
Confidence 789999999999999999999999999985 2 12678999999999999999999
Q ss_pred ecCCCchhHhhHHhhccC
Q 029874 159 IRYVGILNPCEHSIRSSK 176 (186)
Q Consensus 159 vsn~~~~~l~~~~~~~~~ 176 (186)
||||+.+++ +.+++...
T Consensus 143 vSn~~~~~l-~~~~~~~~ 159 (281)
T 1vbj_A 143 VSNFHEHHI-EELLKHCK 159 (281)
T ss_dssp EESCCHHHH-HHHHTSCS
T ss_pred eeCCCHHHH-HHHHHhCC
Confidence 999999885 45555443
No 25
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=100.00 E-value=2.7e-38 Score=260.32 Aligned_cols=148 Identities=41% Similarity=0.743 Sum_probs=131.1
Q ss_pred eeecCCCCcCCccccccccCC-chhHHHHHHHHHHhCCceEeCCCCCCCHHHHHHHHHHHhhcCCccccceEEEeccCCC
Q 029874 2 AITLNNGFKMPIIGLGVWRMD-ESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNS 80 (186)
Q Consensus 2 ~~~~~tg~~v~~lglG~~~~~-~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~~ 80 (186)
+..++||.+||+||||||+++ .+++.++++.|+++|||+||||+.||+|..+|++|++. + ++|++++|+||+|..
T Consensus 42 ~~~L~~g~~v~~lglGt~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~---~-~~R~~v~I~TK~~~~ 117 (310)
T 3b3e_A 42 TVKLHNGVEMPWFGLGVFKVENGNEATESVKAAIKNGYRSIDTAAIYKNEEGVGIGIKES---G-VAREELFITSKVWNE 117 (310)
T ss_dssp EEECTTSCEEESBCEECTTCCTTHHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHS---S-SCGGGCEEEEEECGG
T ss_pred eEECCCCCeeCceeeeCCcCCCHHHHHHHHHHHHHcCCCEEECCCccCCHHHHHHHHHhc---C-CCcceEEEEEeCCCC
Confidence 456789999999999999984 58899999999999999999999999999999999973 3 689999999999874
Q ss_pred --ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEE
Q 029874 81 --DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIG 158 (186)
Q Consensus 81 --~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iG 158 (186)
+++.+++++++||++||+||||+|++|||+.. ...++|++|++|+++|+||+||
T Consensus 118 ~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~------------------------~~~e~~~al~~l~~~Gkir~iG 173 (310)
T 3b3e_A 118 DQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKD------------------------KYKDTWRALEKLYKDGKIRAIG 173 (310)
T ss_dssp GCSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSS------------------------CHHHHHHHHHHHHHTTSEEEEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCeeEEEEeeCCCcc------------------------cHHHHHHHHHHHHHcCCcceEe
Confidence 68999999999999999999999999998643 1678999999999999999999
Q ss_pred ecCCCchhHhhHHhhccCCC
Q 029874 159 IRYVGILNPCEHSIRSSKFS 178 (186)
Q Consensus 159 vsn~~~~~l~~~~~~~~~~~ 178 (186)
||||+.+++. .+++...++
T Consensus 174 vSn~~~~~l~-~~~~~~~~~ 192 (310)
T 3b3e_A 174 VSNFQVHHLE-ELLKDAEIK 192 (310)
T ss_dssp EESCCHHHHH-HHHHHCSSC
T ss_pred ecCCCHHHHH-HHHHhcCCC
Confidence 9999999954 445544444
No 26
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A*
Probab=100.00 E-value=2e-38 Score=261.86 Aligned_cols=152 Identities=27% Similarity=0.430 Sum_probs=131.8
Q ss_pred eecCCCCcCCccccccccCCc--hhHHHHHHHHHHhCCceEeCCCCCC---CHHHHHHHHHHHhhcCCccccceEEEecc
Q 029874 3 ITLNNGFKMPIIGLGVWRMDE--SNIRDLIINAIKIGYRHIDCAADYR---NEAEVGEALAEAFSTGLVKREDLFITTKL 77 (186)
Q Consensus 3 ~~~~tg~~v~~lglG~~~~~~--~~~~~~l~~a~~~Gi~~~Dta~~Yg---~e~~vG~~l~~~~~~~~~~R~~~~i~tK~ 77 (186)
..|+||.+||+||||||+++. +++.+++..|+++|||+||||+.|| ||..+|++|+. +|++++|+||+
T Consensus 25 ~lg~tg~~vs~lglGt~~~g~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~-------~R~~v~I~TK~ 97 (317)
T 1ynp_A 25 QLGTSDLHVSELGFGCMSLGTDETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKG-------RRQDIILATKV 97 (317)
T ss_dssp ECTTSSCEEESBCBCSCCCCSCHHHHHHHHHHHHHTTCCEEECSCBTTBCCCHHHHHHHHTT-------CGGGCEEEEEC
T ss_pred ecCCCCCcccCEeEcCcccCCCHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhc-------CCCeEEEEeee
Confidence 457899999999999998864 7889999999999999999999998 99999999985 79999999999
Q ss_pred CC------------CChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHH
Q 029874 78 WN------------SDHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAM 145 (186)
Q Consensus 78 ~~------------~~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 145 (186)
+. .+++.+++++++||++||+||||+|++|||+.. .++.++|++|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~v~~~~e~SL~rL~~dyiDl~llH~p~~~-----------------------~~~~e~~~al 154 (317)
T 1ynp_A 98 GNRFEQGKEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLYQLHGGTID-----------------------DPIDETIEAF 154 (317)
T ss_dssp ---------------CHHHHHHHHHHHHHHHTCSCEEEEEECSCCTT-----------------------SCHHHHHHHH
T ss_pred CCCcCCCCccccCCCCHHHHHHHHHHHHHHHCCCcEeEEEecCCCCC-----------------------CChHHHHHHH
Confidence 64 267899999999999999999999999998643 1267899999
Q ss_pred HHHHHcCCccEEEecCCCchhHhhHHhhccCCCCCcceee
Q 029874 146 EDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTKFIIVT 185 (186)
Q Consensus 146 ~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~~~~~~ 185 (186)
++|+++|+||+||||||+.+++ +.+++..+++...+.++
T Consensus 155 ~~l~~~Gkir~iGvSn~~~~~l-~~~~~~~~~~~~Q~~~n 193 (317)
T 1ynp_A 155 EELKQEGVIRYYGISSIRPNVI-KEYLKRSNIVSIMMQYS 193 (317)
T ss_dssp HHHHHHTSEEEEEEECCCHHHH-HHHHHHSCCCEEEEECB
T ss_pred HHHHhCCceEEEEecCCCHHHH-HHHHhcCCCEEEeccCC
Confidence 9999999999999999999884 55666667776555554
No 27
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A*
Probab=100.00 E-value=3.9e-38 Score=262.70 Aligned_cols=165 Identities=39% Similarity=0.708 Sum_probs=136.2
Q ss_pred eeecCCCCcCCccccccccCCchhHHHHHHHHHH-hCCceEeCCCCCCCHHHHHHHHHHHhhcCCccccceEEEeccCC-
Q 029874 2 AITLNNGFKMPIIGLGVWRMDESNIRDLIINAIK-IGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWN- 79 (186)
Q Consensus 2 ~~~~~tg~~v~~lglG~~~~~~~~~~~~l~~a~~-~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~- 79 (186)
++.++||.+||+||||||+.+ +++.++|..|++ +|||+||||+.||+|..+|++|++.+..| ++|++++|+||+|.
T Consensus 39 ~~~L~tg~~vp~lglGt~~~~-~~~~~~l~~Al~~~Gi~~iDTA~~Yg~E~~vG~al~~~~~~g-~~R~~v~I~TK~~~~ 116 (344)
T 2bgs_A 39 HFVLKSGHAMPAVGLGTWRAG-SDTAHSVRTAITEAGYRHVDTAAEYGVEKEVGKGLKAAMEAG-IDRKDLFVTSKIWCT 116 (344)
T ss_dssp EEECTTSCEEESBCEECTTCG-GGHHHHHHHHHHTTCCCEEECCGGGTCHHHHHHHHHHHHHTT-CCGGGCEEEEEECGG
T ss_pred eEECCCCCccCCeeEeCCCCc-HHHHHHHHHHHHhcCCCEEECCCccCCHHHHHHHHHHhhhcC-CCcccEEEEeccCCC
Confidence 467899999999999999988 889999999999 99999999999999999999999877667 78999999999985
Q ss_pred -CChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEE
Q 029874 80 -SDHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIG 158 (186)
Q Consensus 80 -~~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iG 158 (186)
.+++.+++++++||++||+||||+|++|||+...+ ++...+. .++ . ...++.++|++|++|+++|+||+||
T Consensus 117 ~~~~~~v~~ale~SL~rLg~dyIDl~llH~p~~~~~---~~~~~~~-~~~---~-~~~~~~e~~~aLe~l~~~GkIr~iG 188 (344)
T 2bgs_A 117 NLAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKD---GAHMPPE-AGE---V-LEFDMEGVWKEMENLVKDGLVKDIG 188 (344)
T ss_dssp GCSHHHHHHHHHHHHHHHTCSCEEEEEESSSCEECT---TCCSSCC-TTC---E-ECCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCcccc---ccccccc-ccc---c-cCCCHHHHHHHHHHHHHcCCccEEE
Confidence 37899999999999999999999999999964311 0000000 000 0 0235789999999999999999999
Q ss_pred ecCCCchhHhhHHhhccCC
Q 029874 159 IRYVGILNPCEHSIRSSKF 177 (186)
Q Consensus 159 vsn~~~~~l~~~~~~~~~~ 177 (186)
||||+.+++. .+++...+
T Consensus 189 vSn~~~~~l~-~~~~~~~i 206 (344)
T 2bgs_A 189 VCNYTVTKLN-RLLRSAKI 206 (344)
T ss_dssp EESCCHHHHH-HHHHHCSS
T ss_pred EecCCHHHHH-HHHHhcCC
Confidence 9999999854 44444443
No 28
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Probab=100.00 E-value=7.3e-38 Score=259.17 Aligned_cols=148 Identities=26% Similarity=0.448 Sum_probs=129.9
Q ss_pred eecCCCCcCCccccccc-----cCCchhHHHHHHHHHHhCCceEeCCCCCCC---HHHHHHHHHHHhhcCCccccceEEE
Q 029874 3 ITLNNGFKMPIIGLGVW-----RMDESNIRDLIINAIKIGYRHIDCAADYRN---EAEVGEALAEAFSTGLVKREDLFIT 74 (186)
Q Consensus 3 ~~~~tg~~v~~lglG~~-----~~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~---e~~vG~~l~~~~~~~~~~R~~~~i~ 74 (186)
..|+||++||+|||||| ..+.+++.++++.|+++|||+||||+.||+ |..+|++|++. + ++|++++|+
T Consensus 7 ~lG~tg~~vs~iglGt~~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~-~~R~~v~I~ 82 (327)
T 3eau_A 7 NLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKK---G-WRRSSLVIT 82 (327)
T ss_dssp ESTTSSCEEESEEEECTTCCCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHH---T-CCGGGCEEE
T ss_pred ccCCCCCcccceeecCccccCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHHhc---C-CccCeEEEE
Confidence 46899999999999998 456788999999999999999999999974 99999999985 4 579999999
Q ss_pred eccCCC---------ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHH
Q 029874 75 TKLWNS---------DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAM 145 (186)
Q Consensus 75 tK~~~~---------~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 145 (186)
||++.. +++.+++++++||++||+||||+|++|||+.. .++.++|++|
T Consensus 83 TK~~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~-----------------------~~~~e~~~al 139 (327)
T 3eau_A 83 TKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPN-----------------------TPMEETVRAM 139 (327)
T ss_dssp EEESBCCSSGGGBSSSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTT-----------------------SCHHHHHHHH
T ss_pred EeecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEEeCCCCC-----------------------CCHHHHHHHH
Confidence 998421 57899999999999999999999999998653 2378899999
Q ss_pred HHHHHcCCccEEEecCCCchhHhhHHhhccCC
Q 029874 146 EDLVSMGLVRSIGIRYVGILNPCEHSIRSSKF 177 (186)
Q Consensus 146 ~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~ 177 (186)
++|+++|+||+||||||+.+++.+.+.....+
T Consensus 140 ~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~ 171 (327)
T 3eau_A 140 THVINQGMAMYWGTSRWSSMEIMEAYSVARQF 171 (327)
T ss_dssp HHHHHTTSEEEEEEESCCHHHHHHHHHHHHHT
T ss_pred HHHHHcCCeeEEeecCCCHHHHHHHHHHHHHc
Confidence 99999999999999999999977766544433
No 29
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=100.00 E-value=8.3e-38 Score=257.37 Aligned_cols=153 Identities=26% Similarity=0.397 Sum_probs=132.2
Q ss_pred eecCCCCcCCccccccccCC---------chhHHHHHHHHHHhCCceEeCCCCCC---CHHHHHHHHHHHhhcCCccccc
Q 029874 3 ITLNNGFKMPIIGLGVWRMD---------ESNIRDLIINAIKIGYRHIDCAADYR---NEAEVGEALAEAFSTGLVKRED 70 (186)
Q Consensus 3 ~~~~tg~~v~~lglG~~~~~---------~~~~~~~l~~a~~~Gi~~~Dta~~Yg---~e~~vG~~l~~~~~~~~~~R~~ 70 (186)
..|+||.+||+||||||+++ .+++.++++.|+++|||+||||+.|| ||..+|++|+.. +|++
T Consensus 5 ~lg~tg~~vs~lglGt~~~g~~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~------~R~~ 78 (312)
T 1pyf_A 5 KLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREF------NRED 78 (312)
T ss_dssp ECTTSCCEECSBCEECTTSSCTTTCSSCCHHHHHHHHHHHHHTTCCEEECCTTTTTTHHHHHHHHHHTTS------CGGG
T ss_pred ecCCCCCcccCEeEeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHhhhc------CCCe
Confidence 34689999999999999764 46789999999999999999999998 899999999862 7999
Q ss_pred eEEEecc--CC--------CChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHH
Q 029874 71 LFITTKL--WN--------SDHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLET 140 (186)
Q Consensus 71 ~~i~tK~--~~--------~~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (186)
++|+||+ |+ .+++.+++++++||++||+||||+|++|||+.. .+..+
T Consensus 79 ~~i~TK~g~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~-----------------------~~~~e 135 (312)
T 1pyf_A 79 VVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEH-----------------------TPKDE 135 (312)
T ss_dssp CEEEEEECEEEETTEEEECCCHHHHHHHHHHHHHHHTSSCBSEEEECSCCSS-----------------------SCHHH
T ss_pred EEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCC-----------------------CCHHH
Confidence 9999995 32 478999999999999999999999999998543 23689
Q ss_pred HHHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCCCCcceee
Q 029874 141 TWHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTKFIIVT 185 (186)
Q Consensus 141 ~~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~~~~~~ 185 (186)
+|++|++|+++|+||+||||||+.++ ++.+++..+|+...+.++
T Consensus 136 ~~~al~~l~~~Gkir~iGvSn~~~~~-l~~~~~~~~~~~~Q~~~~ 179 (312)
T 1pyf_A 136 AVNALNEMKKAGKIRSIGVSNFSLEQ-LKEANKDGLVDVLQGEYN 179 (312)
T ss_dssp HHHHHHHHHHTTSBSCEEEESCCHHH-HHHHTTTSCCCEEEEECB
T ss_pred HHHHHHHHHHCCCcCEEEecCCCHHH-HHHHHhhCCceEEeccCC
Confidence 99999999999999999999999988 555666667765555554
No 30
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1
Probab=100.00 E-value=1.6e-37 Score=257.87 Aligned_cols=153 Identities=31% Similarity=0.492 Sum_probs=132.3
Q ss_pred ecCCCCcCCccccccccCC--------chhHHHHHHHHHHhCCceEeCCCCCC---CHHHHHHHHHHHhhcCCccccceE
Q 029874 4 TLNNGFKMPIIGLGVWRMD--------ESNIRDLIINAIKIGYRHIDCAADYR---NEAEVGEALAEAFSTGLVKREDLF 72 (186)
Q Consensus 4 ~~~tg~~v~~lglG~~~~~--------~~~~~~~l~~a~~~Gi~~~Dta~~Yg---~e~~vG~~l~~~~~~~~~~R~~~~ 72 (186)
.|+||++||+||||||+++ .+++.+++..|+++|||+||||+.|| ||..+|++|+.. + +|++++
T Consensus 6 lg~tg~~vs~lglGt~~~g~~~~g~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~--~R~~~~ 80 (333)
T 1pz1_A 6 IADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEY---M--KRDQVI 80 (333)
T ss_dssp CTTSSCEEESEEEECTGGGCTTTTCCCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHH---T--CGGGCE
T ss_pred cCCCCCcccCEeEechhhcCCcCCCCCHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhcC---C--CcCeEE
Confidence 4689999999999999764 46789999999999999999999999 899999999974 4 799999
Q ss_pred EEeccC---C-------CChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHH
Q 029874 73 ITTKLW---N-------SDHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTW 142 (186)
Q Consensus 73 i~tK~~---~-------~~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (186)
|+||++ . .+++.+++++++||++||+||||+|++|||+.. .++.++|
T Consensus 81 i~TK~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~-----------------------~~~~e~~ 137 (333)
T 1pz1_A 81 LATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPL-----------------------VPIEETA 137 (333)
T ss_dssp EEEEECEEESSSCEEECCCHHHHHHHHHHHHHHTTSSCBSEEEECSCCTT-----------------------SCHHHHH
T ss_pred EEEeeCccCCCCCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCCCCC-----------------------CCHHHHH
Confidence 999995 2 368999999999999999999999999998643 2367999
Q ss_pred HHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCCCCcceee
Q 029874 143 HAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTKFIIVT 185 (186)
Q Consensus 143 ~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~~~~~~ 185 (186)
++|++|+++|+||+||||||+.++ ++.+++..+++...+.++
T Consensus 138 ~al~~l~~~Gkir~iGvSn~~~~~-l~~~~~~~~~~~~Q~~~n 179 (333)
T 1pz1_A 138 EVMKELYDAGKIRAIGVSNFSIEQ-MDTFRAVAPLHTIQPPYN 179 (333)
T ss_dssp HHHHHHHHTTSBSCEEECSCCHHH-HHHHHTTSCCCEECCBCB
T ss_pred HHHHHHHHCCcCCEEEecCCCHHH-HHHHHhcCCcEEEecccc
Confidence 999999999999999999999988 455555566665554444
No 31
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=100.00 E-value=5.6e-38 Score=256.50 Aligned_cols=151 Identities=23% Similarity=0.333 Sum_probs=127.9
Q ss_pred eecCCCCcCCccccccccCC---------------chhHHHHHHHHHHhCCceEeCCCCCC-CHHHHHHHHHHHhhcCCc
Q 029874 3 ITLNNGFKMPIIGLGVWRMD---------------ESNIRDLIINAIKIGYRHIDCAADYR-NEAEVGEALAEAFSTGLV 66 (186)
Q Consensus 3 ~~~~tg~~v~~lglG~~~~~---------------~~~~~~~l~~a~~~Gi~~~Dta~~Yg-~e~~vG~~l~~~~~~~~~ 66 (186)
..|+||.+||+||||||+++ .+++.+++..|+++|||+||||+.|| +|..+|++|+.
T Consensus 34 ~Lg~tg~~vs~lglGt~~~g~~~~~~~~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~sE~~lG~al~~------- 106 (292)
T 4exb_A 34 PLGDTGLAVSPLGLGTVKFGRDQGVKYPSGFTIPDDREAADLLALARDLGINLIDTAPAYGRSEERLGPLLRG------- 106 (292)
T ss_dssp ECTTSSCEECSEEEECSTTTCC---------CCCCHHHHHHHHHHHHHTTCCEEECCTTSTTHHHHHHHHHTT-------
T ss_pred ecCCCCCccCCEeEcccccCCCcccccccccCCCCHHHHHHHHHHHHHcCCCEEEcCCccchHHHHHHHHhcc-------
Confidence 45799999999999999764 37789999999999999999999999 89999999986
Q ss_pred cccceEEEeccCC----------CChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccc
Q 029874 67 KREDLFITTKLWN----------SDHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTI 136 (186)
Q Consensus 67 ~R~~~~i~tK~~~----------~~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (186)
+|++++|+||++. .+++.+++++++||++||+||+|+|++|||... +..
T Consensus 107 ~R~~v~I~TK~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~d---------------------~~~ 165 (292)
T 4exb_A 107 QREHWVIVSKVGEEFVDGQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGND---------------------LDI 165 (292)
T ss_dssp TGGGCEEEEEESBC--CCSCCBCCCHHHHHHHHHHHHHHTTSSCEEEEEEECCSCH---------------------HHH
T ss_pred CCCcEEEEEeeccccCCCCccCCCCHHHHHHHHHHHHHHhCCCceeEEEEecCCCC---------------------ccc
Confidence 7999999999983 378999999999999999999999999998321 011
Q ss_pred cHH-HHHHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCCCCccee
Q 029874 137 SLE-TTWHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTKFIIV 184 (186)
Q Consensus 137 ~~~-~~~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~~~~~ 184 (186)
+.. ++|++|++|+++|+||+||||||+.+++.+. ++. ++...+.+
T Consensus 166 ~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~-~~~--~~~~Q~~~ 211 (292)
T 4exb_A 166 LENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRA-LRE--GDCAMVTY 211 (292)
T ss_dssp HHHSSHHHHHHHHHHTTSEEEEEEECSSHHHHHHH-HHH--SSEEEEEC
T ss_pred cchHHHHHHHHHHHHCCCceEEEeCCCCHHHHHHH-HHh--hcEEeecc
Confidence 233 7999999999999999999999999995544 443 55444433
No 32
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=100.00 E-value=4.6e-37 Score=256.28 Aligned_cols=143 Identities=25% Similarity=0.400 Sum_probs=125.0
Q ss_pred eecCCCCcCCccccccccC-----CchhHHHHHHHHHHhCCceEeCCCCCCC-----HHHHHHHHHHHhhcCCccccceE
Q 029874 3 ITLNNGFKMPIIGLGVWRM-----DESNIRDLIINAIKIGYRHIDCAADYRN-----EAEVGEALAEAFSTGLVKREDLF 72 (186)
Q Consensus 3 ~~~~tg~~v~~lglG~~~~-----~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~-----e~~vG~~l~~~~~~~~~~R~~~~ 72 (186)
..|+||++||+||||||.. +.+++.+++..|+++|||+||||+.||+ |..+|++|++. +.-.|++++
T Consensus 17 ~lg~tg~~vs~lglGt~~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~---~~~~R~~~~ 93 (346)
T 3n6q_A 17 YCGKSGLRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLRED---FAAYRDELI 93 (346)
T ss_dssp ECTTSSCEEESEEEECSSSCSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHH---CTTTGGGCE
T ss_pred ecCCCCCeecCeeecCccccCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCCCcHHHHHHHHHHhh---cccccccEE
Confidence 4689999999999999864 4578899999999999999999999996 99999999974 211499999
Q ss_pred EEeccC----CC------ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHH
Q 029874 73 ITTKLW----NS------DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTW 142 (186)
Q Consensus 73 i~tK~~----~~------~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (186)
|+||++ +. +++.+++++++||++||+||||+|++|||+.. .++.++|
T Consensus 94 I~TK~g~~~~~~~~~~~~s~~~i~~~~e~SL~rL~~dyiDl~~lH~p~~~-----------------------~~~~e~~ 150 (346)
T 3n6q_A 94 ISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDEN-----------------------TPMEETA 150 (346)
T ss_dssp EEEEECSCCSSSTTSSSSCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTT-----------------------SCHHHHH
T ss_pred EEEEecccCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEeEEEEeCCCCC-----------------------CCHHHHH
Confidence 999962 21 67899999999999999999999999998643 2378999
Q ss_pred HHHHHHHHcCCccEEEecCCCchhHhhHH
Q 029874 143 HAMEDLVSMGLVRSIGIRYVGILNPCEHS 171 (186)
Q Consensus 143 ~~l~~l~~~G~ir~iGvsn~~~~~l~~~~ 171 (186)
++|++|+++|+||+||||||+.+++.+.+
T Consensus 151 ~al~~l~~~Gkir~iGvSn~~~~~l~~~~ 179 (346)
T 3n6q_A 151 SALAHAVQSGKALYVGISSYSPERTQKMV 179 (346)
T ss_dssp HHHHHHHHTTSEEEEEEESCCHHHHHHHH
T ss_pred HHHHHHHHcCCeeEEEeCCCCHHHHHHHH
Confidence 99999999999999999999999966654
No 33
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A*
Probab=100.00 E-value=1.2e-37 Score=259.03 Aligned_cols=153 Identities=24% Similarity=0.332 Sum_probs=132.0
Q ss_pred eecCCCCcCCccccccccC--------CchhHHHHHHHHHHhCCceEeCCCCCC----CHHHHHHHHHHHhhcCCccccc
Q 029874 3 ITLNNGFKMPIIGLGVWRM--------DESNIRDLIINAIKIGYRHIDCAADYR----NEAEVGEALAEAFSTGLVKRED 70 (186)
Q Consensus 3 ~~~~tg~~v~~lglG~~~~--------~~~~~~~~l~~a~~~Gi~~~Dta~~Yg----~e~~vG~~l~~~~~~~~~~R~~ 70 (186)
..|+||++||+||||||++ +.+++.+++..|+++|||+||||+.|| ||..+|++|++ + +|++
T Consensus 5 ~lg~tg~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~G~sE~~lG~al~~----~--~R~~ 78 (337)
T 3v0s_A 5 KLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGSNEELLGKALKQ----L--PREX 78 (337)
T ss_dssp ECSSSSCEEESSCEECGGGC-------CHHHHHHHHHHHHHTTCCEEECCTTSSSTTHHHHHHHHHHTT----S--CGGG
T ss_pred ecCCCCceecCeeecccccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCcHHHHHHHHHhh----c--CCcc
Confidence 4579999999999999865 457789999999999999999999998 79999999986 2 8999
Q ss_pred eEEEeccCCC-----------ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHH
Q 029874 71 LFITTKLWNS-----------DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLE 139 (186)
Q Consensus 71 ~~i~tK~~~~-----------~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (186)
++|+||++.. +++.+++++++||++||+||||+|++|||+.. .++.
T Consensus 79 ~~i~TK~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~-----------------------~~~~ 135 (337)
T 3v0s_A 79 IQVGTKFGIHEIGFSGVKAXGTPDYVRSCCEASLKRLDVDYIDLFYIHRIDTT-----------------------VPIE 135 (337)
T ss_dssp CEEEEEECEEEEETTEEEECCCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTT-----------------------SCHH
T ss_pred eEEEeeeccccCCCCcccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCC-----------------------CCHH
Confidence 9999999643 67899999999999999999999999998653 2367
Q ss_pred HHHHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCCCCcceee
Q 029874 140 TTWHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTKFIIVT 185 (186)
Q Consensus 140 ~~~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~~~~~~ 185 (186)
++|++|++|+++|+||+||||||+.+++. .+++..+++...+.++
T Consensus 136 e~~~al~~l~~~Gkir~iGvSn~~~~~l~-~~~~~~~~~~~Q~~~~ 180 (337)
T 3v0s_A 136 ITMGELXXLVEEGKIXYVGLSEASPDTIR-RAHAVHPVTALQIEYS 180 (337)
T ss_dssp HHHHHHHHHHHTTSEEEEEEESCCHHHHH-HHHHHSCCCEEEEECB
T ss_pred HHHHHHHHHHHCCCeeEEeccCCCHHHHH-HHhccCCceEEEeecc
Confidence 89999999999999999999999999954 4556666664444433
No 34
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=100.00 E-value=1.8e-37 Score=259.11 Aligned_cols=152 Identities=24% Similarity=0.374 Sum_probs=132.7
Q ss_pred eecCCCCcCCccccccccCC--------chhHHHHHHHHHHhCCceEeCCCCCC---CHHHHHHHHHHHhhcCCccccce
Q 029874 3 ITLNNGFKMPIIGLGVWRMD--------ESNIRDLIINAIKIGYRHIDCAADYR---NEAEVGEALAEAFSTGLVKREDL 71 (186)
Q Consensus 3 ~~~~tg~~v~~lglG~~~~~--------~~~~~~~l~~a~~~Gi~~~Dta~~Yg---~e~~vG~~l~~~~~~~~~~R~~~ 71 (186)
..|+||++||+||||||+++ .+++.++++.|+++|||+||||+.|| ||..+|++|+. +|+++
T Consensus 23 ~lg~tg~~vs~lglGt~~~g~~~~g~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~-------~R~~v 95 (348)
T 3n2t_A 23 RIPGIDTPLSRVALGTWAIGGWMWGGPDDDNGVRTIHAALDEGINLIDTAPVYGFGHSEEIVGRALAE-------KPNKA 95 (348)
T ss_dssp CCTTCSSCEESEEEECTTSSCSSSCSTTHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHH-------SCCCC
T ss_pred ecCCCCCccCCEeEeCccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEChhhcCCChHHHHHHHHHhh-------CCCeE
Confidence 35789999999999999764 47889999999999999999999998 89999999985 79999
Q ss_pred EEEecc---CC------------CChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccc
Q 029874 72 FITTKL---WN------------SDHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTI 136 (186)
Q Consensus 72 ~i~tK~---~~------------~~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (186)
+|+||+ |. .+++.+++++++||++||+||||+|++|||+.. .
T Consensus 96 ~I~TK~g~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~-----------------------~ 152 (348)
T 3n2t_A 96 HVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVEDSLRRLRVETIDLEQIHWPDDK-----------------------T 152 (348)
T ss_dssp EEEEEECEEEESSSTTTCEEEECCCHHHHHHHHHHHHHHHTCSSEEEEEESSCCTT-----------------------S
T ss_pred EEEEeecCCCcCCCcccccccCCCCHHHHHHHHHHHHHHhCCCcEEEEEecCCCCC-----------------------C
Confidence 999999 51 368999999999999999999999999998653 2
Q ss_pred cHHHHHHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCCCCcceee
Q 029874 137 SLETTWHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTKFIIVT 185 (186)
Q Consensus 137 ~~~~~~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~~~~~~ 185 (186)
++.++|++|++|+++|+||+||||||+.++ ++.+++..+++...+.++
T Consensus 153 ~~~e~~~al~~l~~~Gkir~iGvSn~~~~~-l~~~~~~~~~~~~Q~~~n 200 (348)
T 3n2t_A 153 PIDESARELQKLHQDGKIRALGVSNFSPEQ-MDIFREVAPLATIQPPLN 200 (348)
T ss_dssp CHHHHHHHHHHHHHTTSEEEEEEESCCHHH-HHHHHHHSCCCEEECBCB
T ss_pred CHHHHHHHHHHHHHhCcceEEecCCCCHHH-HHHHHHhCCccEEEeeec
Confidence 378999999999999999999999999998 455566667775555444
No 35
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A*
Probab=100.00 E-value=4.5e-37 Score=253.94 Aligned_cols=141 Identities=27% Similarity=0.371 Sum_probs=124.6
Q ss_pred ecCCCCcCCccccccccC-----CchhHHHHHHHHHHhCCceEeCCCCCC---CHHHHHHHHHHHhhcCCccccceEEEe
Q 029874 4 TLNNGFKMPIIGLGVWRM-----DESNIRDLIINAIKIGYRHIDCAADYR---NEAEVGEALAEAFSTGLVKREDLFITT 75 (186)
Q Consensus 4 ~~~tg~~v~~lglG~~~~-----~~~~~~~~l~~a~~~Gi~~~Dta~~Yg---~e~~vG~~l~~~~~~~~~~R~~~~i~t 75 (186)
.+++|++||+||||||++ +.+++.+++..|+++|||+||||+.|| ||..+|++|+.. + .+|++++|+|
T Consensus 28 Lg~~~~~vs~lglGt~~~g~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~-~~R~~v~I~T 103 (319)
T 1ur3_M 28 IAPQGPEFSRFVMGYWRLMDWNMSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLA---P-HLRERMEIVS 103 (319)
T ss_dssp CSTTCCEEESSEEECTTTTTTTCCHHHHHHHHHHHHHHTCCEEECCSSTTTTTHHHHHHHHHHHC---G-GGTTTCEEEE
T ss_pred CCCCCcccccccEeccccCCCCCCHHHHHHHHHHHHHcCCCeEEcccccCCCcHHHHHHHHHHhC---C-CCCCeEEEEE
Confidence 466778999999999987 567889999999999999999999998 899999999973 2 4799999999
Q ss_pred ccCC--------------CChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHH
Q 029874 76 KLWN--------------SDHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETT 141 (186)
Q Consensus 76 K~~~--------------~~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (186)
|++. .+++.+++++++||++||+||||+|++|||+.. .+..++
T Consensus 104 K~~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~-----------------------~~~~e~ 160 (319)
T 1ur3_M 104 KCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPL-----------------------MDADEV 160 (319)
T ss_dssp EECEECTTSTTCSSCEECCCHHHHHHHHHHHHHHHTCSCBSEEEECSCCTT-----------------------CCHHHH
T ss_pred eeccCCCCCcccccccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCC-----------------------CCHHHH
Confidence 9963 367899999999999999999999999998653 136789
Q ss_pred HHHHHHHHHcCCccEEEecCCCchhHhhHH
Q 029874 142 WHAMEDLVSMGLVRSIGIRYVGILNPCEHS 171 (186)
Q Consensus 142 ~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~ 171 (186)
|++|++|+++|+||+||||||+.+++.+.+
T Consensus 161 ~~al~~l~~~Gkir~iGvSn~~~~~l~~~~ 190 (319)
T 1ur3_M 161 ADAFKHLHQSGKVRHFGVSNFTPAQFALLQ 190 (319)
T ss_dssp HHHHHHHHHTTSBCCEEEESCCHHHHHHHH
T ss_pred HHHHHHHHHCCCccEEEecCCCHHHHHHHH
Confidence 999999999999999999999999854433
No 36
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=100.00 E-value=3.9e-37 Score=257.44 Aligned_cols=143 Identities=29% Similarity=0.446 Sum_probs=124.9
Q ss_pred eecCCCCcCCccccccccC-----CchhHHHHHHHHHHhCCceEeCCCCCCC-----HHHHHHHHHHHhhcCCccccceE
Q 029874 3 ITLNNGFKMPIIGLGVWRM-----DESNIRDLIINAIKIGYRHIDCAADYRN-----EAEVGEALAEAFSTGLVKREDLF 72 (186)
Q Consensus 3 ~~~~tg~~v~~lglG~~~~-----~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~-----e~~vG~~l~~~~~~~~~~R~~~~ 72 (186)
..|+||++||+||||||+. +.+++.++|..|+++|||+||||+.||+ |..+|++|++. ..-.|++++
T Consensus 38 ~lg~tg~~vs~lglGt~~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~---~~~~R~~v~ 114 (353)
T 3erp_A 38 RCGRSGVKLPAISLGLWHNFGDTTRVENSRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQED---FLPWRDELI 114 (353)
T ss_dssp ECSSSSCEEESEEEECSSSCSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHH---TGGGGGGCE
T ss_pred ecCCCCCccCCeeecChhhcCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCChHHHHHHHHHHhh---ccCCCCeEE
Confidence 4679999999999999943 6688999999999999999999999997 99999999962 101499999
Q ss_pred EEeccCCC----------ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHH
Q 029874 73 ITTKLWNS----------DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTW 142 (186)
Q Consensus 73 i~tK~~~~----------~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (186)
|+||++.. +++.+++++++||++||+||||+|++|||+.. .++.++|
T Consensus 115 I~TK~g~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~-----------------------~~~~e~~ 171 (353)
T 3erp_A 115 ISTKAGYTMWDGPYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPE-----------------------TPLKETM 171 (353)
T ss_dssp EEEEESSCCSSSTTSSTTCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTT-----------------------SCHHHHH
T ss_pred EEeeeccCCCCCcccCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCC-----------------------CCHHHHH
Confidence 99998321 57899999999999999999999999998643 2368899
Q ss_pred HHHHHHHHcCCccEEEecCCCchhHhhHH
Q 029874 143 HAMEDLVSMGLVRSIGIRYVGILNPCEHS 171 (186)
Q Consensus 143 ~~l~~l~~~G~ir~iGvsn~~~~~l~~~~ 171 (186)
++|++|+++|+||+||||||+.+++.+.+
T Consensus 172 ~aL~~l~~~Gkir~iGvSn~~~~~l~~~~ 200 (353)
T 3erp_A 172 KALDHLVRHGKALYVGISNYPADLARQAI 200 (353)
T ss_dssp HHHHHHHHTTSEEEEEEESCCHHHHHHHH
T ss_pred HHHHHHHHCCCccEEEecCCCHHHHHHHH
Confidence 99999999999999999999999966554
No 37
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=100.00 E-value=2.1e-37 Score=260.31 Aligned_cols=150 Identities=26% Similarity=0.437 Sum_probs=130.5
Q ss_pred eeecCCCCcCCccccccc-----cCCchhHHHHHHHHHHhCCceEeCCCCCCC---HHHHHHHHHHHhhcCCccccceEE
Q 029874 2 AITLNNGFKMPIIGLGVW-----RMDESNIRDLIINAIKIGYRHIDCAADYRN---EAEVGEALAEAFSTGLVKREDLFI 73 (186)
Q Consensus 2 ~~~~~tg~~v~~lglG~~-----~~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~---e~~vG~~l~~~~~~~~~~R~~~~i 73 (186)
+..|+||++||+|||||| ..+.+++.++|+.|+++|||+||||+.||+ |..+|++|++. + ++|++++|
T Consensus 40 r~lG~tg~~vs~iglGt~~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~-~~R~~v~I 115 (367)
T 3lut_A 40 RNLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKK---G-WRRSSLVI 115 (367)
T ss_dssp EESTTSSCEEESEEEECTTCCCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHH---T-CCGGGCEE
T ss_pred eecCCCCCcccceeECCccccCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHHHhC---C-CCCceEEE
Confidence 346899999999999998 456788899999999999999999999985 99999999985 4 57999999
Q ss_pred EeccCC---------CChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHH
Q 029874 74 TTKLWN---------SDHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHA 144 (186)
Q Consensus 74 ~tK~~~---------~~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (186)
+||++. .+++.+++++++||++||+||||+|++|||+.. .++.++|++
T Consensus 116 ~TK~~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~pd~~-----------------------~~~~e~~~a 172 (367)
T 3lut_A 116 TTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPN-----------------------TPMEETVRA 172 (367)
T ss_dssp EEEESBCCSSGGGBSSCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTT-----------------------SCHHHHHHH
T ss_pred EeccccCCCCccCCCCCHHHHHHHHHHHHHHhCCCccceEEecCCCCC-----------------------CCHHHHHHH
Confidence 999843 147899999999999999999999999998643 237899999
Q ss_pred HHHHHHcCCccEEEecCCCchhHhhHHhhccCCC
Q 029874 145 MEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFS 178 (186)
Q Consensus 145 l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~ 178 (186)
|++|+++|+||+||||||+.+++.+.+.....++
T Consensus 173 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~ 206 (367)
T 3lut_A 173 MTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFN 206 (367)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCeeEEEecCCCHHHHHHHHHHHHHcC
Confidence 9999999999999999999999777665444333
No 38
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=4.2e-36 Score=250.19 Aligned_cols=157 Identities=31% Similarity=0.454 Sum_probs=125.9
Q ss_pred ecCCCCcCCccccccccC----CchhHHHHHHHHHHhCCceEeCCCCCC----------CHHHHHHHHHHHhhcCCcccc
Q 029874 4 TLNNGFKMPIIGLGVWRM----DESNIRDLIINAIKIGYRHIDCAADYR----------NEAEVGEALAEAFSTGLVKRE 69 (186)
Q Consensus 4 ~~~tg~~v~~lglG~~~~----~~~~~~~~l~~a~~~Gi~~~Dta~~Yg----------~e~~vG~~l~~~~~~~~~~R~ 69 (186)
.|+||++||+||||||++ +.+++.++|..|+++|||+||||+.|| ||..+|++|++. + +|+
T Consensus 6 lg~tg~~vs~lglGt~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~~~~~~G~sE~~lG~al~~~---~--~R~ 80 (346)
T 1lqa_A 6 IPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKH---G--SRE 80 (346)
T ss_dssp CTTSSCEEESEEEECTTBTTTBCHHHHHHHHHHHHHTTCCEEECCTTCSSSCCTTTTTHHHHHHHHHHHHH---C--CGG
T ss_pred cCCCCCeecCeeEEccccCCCCCHHHHHHHHHHHHHcCCCEEEChhhcCCCccCCCCCccHHHHHHHHhhc---C--CCc
Confidence 457999999999999865 467889999999999999999999992 799999999985 4 799
Q ss_pred ceEEEeccCC--------------CChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCccccccc
Q 029874 70 DLFITTKLWN--------------SDHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTT 135 (186)
Q Consensus 70 ~~~i~tK~~~--------------~~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (186)
+++|+||++. .+++.+++++++||++||+||||+|++|||....+. .+....+.. + ....
T Consensus 81 ~~~i~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~-~~~~~~~~~-d----~~~~ 154 (346)
T 1lqa_A 81 KLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNC-FGKLGYSWT-D----SAPA 154 (346)
T ss_dssp GCEEEEEECCSCCTTCCCSSTTCCSSHHHHHHHHHHHHHHHTSSCEEEEEECSCSSCCSC-TTCCSCCCC-S----SCCS
T ss_pred eEEEEEeECCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCccccccc-ccccccccc-c----cccC
Confidence 9999999953 367899999999999999999999999999543110 000000000 0 0013
Q ss_pred ccHHHHHHHHHHHHHcCCccEEEecCCCchhHhhHH
Q 029874 136 ISLETTWHAMEDLVSMGLVRSIGIRYVGILNPCEHS 171 (186)
Q Consensus 136 ~~~~~~~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~ 171 (186)
.++.++|++|++|+++|+||+||||||+.+++.+.+
T Consensus 155 ~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~ 190 (346)
T 1lqa_A 155 VSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYL 190 (346)
T ss_dssp SCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEecCCCHHHHHHHH
Confidence 457899999999999999999999999998865543
No 39
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto reductase family 7, SSA reductase, barrel; HET: FLC NDP; 2.4A {Homo sapiens}
Probab=100.00 E-value=3.7e-35 Score=246.10 Aligned_cols=139 Identities=23% Similarity=0.202 Sum_probs=117.6
Q ss_pred CCCCcCCccccccccC----CchhHHHHHHHHHHhCCceEeCCCCCC---CHHHHHHHHHHHhhcCCccccceEEEeccC
Q 029874 6 NNGFKMPIIGLGVWRM----DESNIRDLIINAIKIGYRHIDCAADYR---NEAEVGEALAEAFSTGLVKREDLFITTKLW 78 (186)
Q Consensus 6 ~tg~~v~~lglG~~~~----~~~~~~~~l~~a~~~Gi~~~Dta~~Yg---~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~ 78 (186)
.++.++|+||||||++ +.+++.++|..|+++|||+||||+.|| ||..+|++|++. .+ .|++++|+||++
T Consensus 33 ~~~~~ip~lglGt~~~g~~~~~~~~~~~l~~Al~~Gin~~DTA~~Yg~G~sE~~lG~al~~~--~~--~r~~v~I~TK~~ 108 (360)
T 2bp1_A 33 RPPPPRVASVLGTMEMGRRMDAPASAAAVRAFLERGHTELDTAFMYSDGQSETILGGLGLGL--GG--GDCRVKIATKAN 108 (360)
T ss_dssp -----CCEEEEECTTBTTTBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHTSCCCT--TS--TTCCCEEEEEEC
T ss_pred CCCCCCCCEEECchhhCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHhhc--cC--CCCeEEEEeeec
Confidence 3466799999999987 567899999999999999999999994 899999999632 12 355799999997
Q ss_pred CC-----ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCC
Q 029874 79 NS-----DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGL 153 (186)
Q Consensus 79 ~~-----~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ 153 (186)
+. +++.+++++++||++||+||||+|++|||+.. .++.++|++|++|+++|+
T Consensus 109 ~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~-----------------------~~~~e~~~aL~~l~~~Gk 165 (360)
T 2bp1_A 109 PWDGKSLKPDSVRSQLETSLKRLQCPQVDLFYLHAPDHG-----------------------TPVEETLHACQRLHQEGK 165 (360)
T ss_dssp CCTTCCSSHHHHHHHHHHHHHHHTCSCEEEEEECSCCTT-----------------------SCHHHHHHHHHHHHHTTS
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCC-----------------------CCHHHHHHHHHHHHHCCC
Confidence 54 68999999999999999999999999998643 236789999999999999
Q ss_pred ccEEEecCCCchhHhhHH
Q 029874 154 VRSIGIRYVGILNPCEHS 171 (186)
Q Consensus 154 ir~iGvsn~~~~~l~~~~ 171 (186)
||+||||||+.+++.+.+
T Consensus 166 ir~iGvSn~~~~~l~~~~ 183 (360)
T 2bp1_A 166 FVELGLSNYASWEVAEIC 183 (360)
T ss_dssp EEEEEEESCCHHHHHHHH
T ss_pred ccEEEEeCCCHHHHHHHH
Confidence 999999999999865554
No 40
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=100.00 E-value=4.7e-35 Score=242.34 Aligned_cols=135 Identities=25% Similarity=0.262 Sum_probs=118.9
Q ss_pred cCCccccccccC----CchhHHHHHHHHHHhCCceEeCCCCCC---CHHHHHHHHHHHhhcCCccccceEEEeccCCC--
Q 029874 10 KMPIIGLGVWRM----DESNIRDLIINAIKIGYRHIDCAADYR---NEAEVGEALAEAFSTGLVKREDLFITTKLWNS-- 80 (186)
Q Consensus 10 ~v~~lglG~~~~----~~~~~~~~l~~a~~~Gi~~~Dta~~Yg---~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~~-- 80 (186)
.+|+||||||++ +.+++.++|..|+++|||+||||+.|| ||..+|++|+.. + ..|++++|+||+++.
T Consensus 4 ~~~~lglGt~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~-~~r~~~~i~TK~~~~~~ 79 (327)
T 1gve_A 4 ARPATVLGAMEMGRRMDVTSSSASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLGL---G-RSGCKVKIATKAAPMFG 79 (327)
T ss_dssp CCCEEEEECTTBTTTBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHTTSCCCT---T-STTCCSEEEEEECSCTT
T ss_pred CCCCeEEcccccCCCCCHHHHHHHHHHHHHcCCCEEEchhhcCCCchHHHHHHHHhhc---C-CCCCeEEEEEEECCCCC
Confidence 579999999987 567899999999999999999999994 899999999752 2 247789999999753
Q ss_pred ---ChhHHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEE
Q 029874 81 ---DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSI 157 (186)
Q Consensus 81 ---~~~~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i 157 (186)
+++.+++++++||++||+||||+|++|||+.. .++.++|++|++|+++|+||+|
T Consensus 80 ~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~-----------------------~~~~e~~~al~~l~~~Gkir~i 136 (327)
T 1gve_A 80 KTLKPADVRFQLETSLKRLQCPRVDLFYLHFPDHG-----------------------TPIEETLQACHQLHQEGKFVEL 136 (327)
T ss_dssp CCSSHHHHHHHHHHHHHHTTCSCEEEEEECSCCTT-----------------------SCHHHHHHHHHHHHHTTSEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHCCCeEeEEEecCCCCC-----------------------CCHHHHHHHHHHHHhCCceeEE
Confidence 68999999999999999999999999998643 2367999999999999999999
Q ss_pred EecCCCchhHhhHH
Q 029874 158 GIRYVGILNPCEHS 171 (186)
Q Consensus 158 Gvsn~~~~~l~~~~ 171 (186)
|||||+.+++.+.+
T Consensus 137 GvSn~~~~~l~~~~ 150 (327)
T 1gve_A 137 GLSNYVSWEVAEIC 150 (327)
T ss_dssp EEESCCHHHHHHHH
T ss_pred EecCCCHHHHHHHH
Confidence 99999999965554
No 41
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=90.98 E-value=0.087 Score=48.11 Aligned_cols=72 Identities=13% Similarity=-0.029 Sum_probs=48.8
Q ss_pred HHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEEec--CCCch-
Q 029874 89 CKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGIR--YVGIL- 165 (186)
Q Consensus 89 ~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs--n~~~~- 165 (186)
++.+|+.|+++|+|++ +|.-... ...+++++++++..+|+|+++|++ ++...
T Consensus 231 ~e~sL~~L~~d~vdI~-I~Ghn~~------------------------~~~~iLeaa~~a~~~g~I~~iG~c~T~he~lr 285 (807)
T 3cf4_A 231 VEIGMGTIDKSKPFLC-VIGHNVA------------------------GVTYMMDYMEDNNLTDKMEIAGLCCTAIDLTR 285 (807)
T ss_dssp EEESGGGSCTTSCEEE-EESSCCH------------------------HHHHHHHHHHHTTCTTTSEEEEESHHHHHHTT
T ss_pred eeccccccCCCCceEE-EECCcCc------------------------cHHHHHHHHHHCCCCCCCcEEeeccCCCchhh
Confidence 4566788999999995 7642211 135788999999999999999554 33331
Q ss_pred ---h--------------HhhHHhhccCCCCCcceee
Q 029874 166 ---N--------------PCEHSIRSSKFSTKFIIVT 185 (186)
Q Consensus 166 ---~--------------l~~~~~~~~~~~~~~~~~~ 185 (186)
. .....+++|.++...+.||
T Consensus 286 ~~~~~~~~~~~pv~G~~~~~~~~i~tGa~dv~vV~~n 322 (807)
T 3cf4_A 286 YKEADRRPPYAKVIGSMSKELKVIRSGMPDVIVVDEQ 322 (807)
T ss_dssp TTCTTCCCCCSEEEESGGGHHHHHHHTCCSEEEECSS
T ss_pred ccccccccccccccccHHHHHHHhhcCCCeEEEEEec
Confidence 0 2445577999987665553
No 42
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=64.06 E-value=12 Score=28.89 Aligned_cols=79 Identities=3% Similarity=0.111 Sum_probs=47.5
Q ss_pred cccccccCCchhHHHHHHHHHHhCCceEeCCCCCC----CHHHHHHHHHHHhhcCCccccceEEEeccCCCChhHHHHHH
Q 029874 14 IGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYR----NEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGHVLEAC 89 (186)
Q Consensus 14 lglG~~~~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg----~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~~~~~~i~~~~ 89 (186)
+.+=+..++.++...+.+.|.++|..|+.|+..|+ +...+- .+++. ...++-|-.-....+.++..+-+
T Consensus 147 VIlEt~~Lt~eei~~a~~ia~~aGADfVKTSTGf~~ggAt~~dv~-lmr~~------vg~~v~VKasGGIrt~~da~~~i 219 (239)
T 3ngj_A 147 VIIECCYLTNEEKVEVCKRCVAAGAEYVKTSTGFGTHGATPEDVK-LMKDT------VGDKALVKAAGGIRTFDDAMKMI 219 (239)
T ss_dssp EECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHH-HHHHH------HGGGSEEEEESSCCSHHHHHHHH
T ss_pred EEEecCCCCHHHHHHHHHHHHHHCcCEEECCCCCCCCCCCHHHHH-HHHHh------hCCCceEEEeCCCCCHHHHHHHH
Confidence 34444456778888999999999999999999875 222222 23332 12223222222344667777766
Q ss_pred HHHHHHhCCC
Q 029874 90 KDSLKKLQLD 99 (186)
Q Consensus 90 ~~sl~~Lg~~ 99 (186)
+..-.|+|++
T Consensus 220 ~aGA~riGtS 229 (239)
T 3ngj_A 220 NNGASRIGAS 229 (239)
T ss_dssp HTTEEEEEES
T ss_pred Hhcccceecc
Confidence 5555555543
No 43
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=57.79 E-value=26 Score=22.45 Aligned_cols=41 Identities=2% Similarity=-0.283 Sum_probs=31.0
Q ss_pred HHHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCCCCc
Q 029874 141 TWHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTKF 181 (186)
Q Consensus 141 ~~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~~ 181 (186)
.++.+..+++...+.-|-+|.+........+++.|..++..
T Consensus 61 g~~~~~~lr~~~~~~ii~~t~~~~~~~~~~~~~~ga~~~l~ 101 (120)
T 3f6p_A 61 GVEVCREVRKKYDMPIIMLTAKDSEIDKVIGLEIGADDYVT 101 (120)
T ss_dssp HHHHHHHHHTTCCSCEEEEEESSCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEECCCChHHHHHHHhCCcceeEc
Confidence 46677777776678889999888877777788888777443
No 44
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=57.13 E-value=46 Score=26.52 Aligned_cols=89 Identities=13% Similarity=0.039 Sum_probs=53.9
Q ss_pred CCccccccccCCchh-HHHHHHHHHHhCCceEeCCCCCC----C---HHHHHHHHHHHhh--------cCCcccc---ce
Q 029874 11 MPIIGLGVWRMDESN-IRDLIINAIKIGYRHIDCAADYR----N---EAEVGEALAEAFS--------TGLVKRE---DL 71 (186)
Q Consensus 11 v~~lglG~~~~~~~~-~~~~l~~a~~~Gi~~~Dta~~Yg----~---e~~vG~~l~~~~~--------~~~~~R~---~~ 71 (186)
+-++.+-+..+..++ ..++...|.++|..|+=||..++ + -..+-++++++.+ .| +.|. .-
T Consensus 152 ~lKVIlEt~~Lt~~e~i~~A~~ia~~AGADFVKTSTGf~~~gAT~edV~lM~~~v~~~~~~~~~~~~~~~-~~~~~~tg~ 230 (297)
T 4eiv_A 152 TLKVVLSGGELQGGDIISRAAVAALEGGADFLQTSSGLGATHATMFTVHLISIALREYMVRENERIRVEG-INREGAAVR 230 (297)
T ss_dssp EEEEECCSSCCCCHHHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHHHHHCC-------------------
T ss_pred ceEEEEecccCCcHHHHHHHHHHHHHhCCCEEEcCCCCCCCCCCHHHHHHHHHHHHHHhccccccccccc-cccccccCC
Confidence 334556666666555 67899999999999999999985 1 2355555554321 11 1111 11
Q ss_pred EEEeccC---CCChhHHHHHHHHHHHHhCCCcc
Q 029874 72 FITTKLW---NSDHGHVLEACKDSLKKLQLDYL 101 (186)
Q Consensus 72 ~i~tK~~---~~~~~~i~~~~~~sl~~Lg~~~l 101 (186)
.+..|.. ..+.++..+-++..-+ ||-+|+
T Consensus 231 ~vgvKAs~GGIrt~e~A~~~i~~~~e-lG~~wl 262 (297)
T 4eiv_A 231 CIGIKIEVGDVHMAETADFLMQMIFE-NGPRSI 262 (297)
T ss_dssp CCEEEEECTTCCHHHHHHHHHHHHHH-HCGGGC
T ss_pred ceeEEecCCCCCCHHHHHHHHHHHHH-hCcccc
Confidence 2334443 3467777777777777 997654
No 45
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=56.11 E-value=78 Score=25.46 Aligned_cols=131 Identities=13% Similarity=0.198 Sum_probs=68.0
Q ss_pred cCCccccccc-cCCchhHHHHHHHHHHhCCceEeCCCCCCC---HHHHHHHHHHHhhcCCccccceEEEeccC-CCChhH
Q 029874 10 KMPIIGLGVW-RMDESNIRDLIINAIKIGYRHIDCAADYRN---EAEVGEALAEAFSTGLVKREDLFITTKLW-NSDHGH 84 (186)
Q Consensus 10 ~v~~lglG~~-~~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~---e~~vG~~l~~~~~~~~~~R~~~~i~tK~~-~~~~~~ 84 (186)
++|....|.+ ..+.++..+....+.+.|++.|..--..++ ...+=+++++.+ | .++.|..+.- ..+.+.
T Consensus 133 ~v~~y~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~--G----~d~~l~vDan~~~~~~~ 206 (371)
T 2ovl_A 133 VVPVYAGGIDLELPVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRVSALREHL--G----DSFPLMVDANMKWTVDG 206 (371)
T ss_dssp EEEEEEECCBTTSCHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHHHHHHHHH--C----TTSCEEEECTTCSCHHH
T ss_pred CeeEEEeCCCcCCCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHHh--C----CCCeEEEECCCCCCHHH
Confidence 4444333333 235566677778888999999885333222 223334555532 2 2344444442 235555
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEEecCCCc
Q 029874 85 VLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGIRYVGI 164 (186)
Q Consensus 85 i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvsn~~~ 164 (186)
..+-++ .|+.+++++ +..|-.. +-|+.+.++++.-.|--++--+...
T Consensus 207 a~~~~~-~l~~~~i~~-----iEqP~~~---------------------------~d~~~~~~l~~~~~iPI~~dE~~~~ 253 (371)
T 2ovl_A 207 AIRAAR-ALAPFDLHW-----IEEPTIP---------------------------DDLVGNARIVRESGHTIAGGENLHT 253 (371)
T ss_dssp HHHHHH-HHGGGCCSE-----EECCSCT---------------------------TCHHHHHHHHHHHCSCEEECTTCCS
T ss_pred HHHHHH-HHHhcCCCE-----EECCCCc---------------------------ccHHHHHHHHhhCCCCEEeCCCCCC
Confidence 544443 367776653 3444211 1255566666544455444444444
Q ss_pred hhHhhHHhhccCCCC
Q 029874 165 LNPCEHSIRSSKFST 179 (186)
Q Consensus 165 ~~l~~~~~~~~~~~~ 179 (186)
..-.+.+++.+..|.
T Consensus 254 ~~~~~~~i~~~~~d~ 268 (371)
T 2ovl_A 254 LYDFHNAVRAGSLTL 268 (371)
T ss_dssp HHHHHHHHHHTCCSE
T ss_pred HHHHHHHHHcCCCCE
Confidence 444677777777764
No 46
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=55.94 E-value=70 Score=24.85 Aligned_cols=82 Identities=13% Similarity=0.078 Sum_probs=55.1
Q ss_pred cccccccCCchh-HHHHHHHHHHhCCceEeCCCCCC----CHH---HHHHHHHHHhhcCCccccceEEEecc--CCCChh
Q 029874 14 IGLGVWRMDESN-IRDLIINAIKIGYRHIDCAADYR----NEA---EVGEALAEAFSTGLVKREDLFITTKL--WNSDHG 83 (186)
Q Consensus 14 lglG~~~~~~~~-~~~~l~~a~~~Gi~~~Dta~~Yg----~e~---~vG~~l~~~~~~~~~~R~~~~i~tK~--~~~~~~ 83 (186)
+.+-+..+...+ ...+.+.|.++|.-|+=|+..|+ +-. .+-++++++ + ...++ ..|. ...+.+
T Consensus 139 vIlEt~~L~d~e~i~~a~~ia~eaGADfVKTSTGf~~~gAt~e~v~lm~~~I~~~---~--~g~~v--~VKaaGGIrt~~ 211 (260)
T 1p1x_A 139 VIIETGELKDEALIRKASEISIKAGADFIKTSTGKVAVNATPESARIMMEVIRDM---G--VEKTV--GFKPAGGVRTAE 211 (260)
T ss_dssp EECCHHHHCSHHHHHHHHHHHHHTTCSEEECCCSCSSCCCCHHHHHHHHHHHHHH---T--CTTTC--EEECBSSCCSHH
T ss_pred EEEecccCCcHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHh---c--CCCCc--eEEEeCCCCCHH
Confidence 345554455555 67899999999999999998885 333 555666654 1 11222 3333 344788
Q ss_pred HHHHHHHHHHHHhCCCccc
Q 029874 84 HVLEACKDSLKKLQLDYLD 102 (186)
Q Consensus 84 ~i~~~~~~sl~~Lg~~~lD 102 (186)
+..+-++..-+.||-+|++
T Consensus 212 ~al~~i~aga~~lG~~w~~ 230 (260)
T 1p1x_A 212 DAQKYLAIADELFGADWAD 230 (260)
T ss_dssp HHHHHHHHHHHHHCTTSCS
T ss_pred HHHHHHHhhhhhccccccc
Confidence 8888888888888877543
No 47
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=55.54 E-value=22 Score=27.07 Aligned_cols=36 Identities=8% Similarity=-0.006 Sum_probs=29.4
Q ss_pred ccccccccCCchhHHHHHHHHHHhCCceEeCCCCCC
Q 029874 13 IIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYR 48 (186)
Q Consensus 13 ~lglG~~~~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg 48 (186)
++.+-+.-+..++...+.+.|.++|.-|+=|+..|+
T Consensus 117 KvIlEt~~Lt~eei~~a~~ia~eaGADfVKTSTGf~ 152 (226)
T 1vcv_A 117 KVITEEPYLRDEERYTLYDIIAEAGAHFIKSSTGFA 152 (226)
T ss_dssp EEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSCC
T ss_pred eEEEeccCCCHHHHHHHHHHHHHcCCCEEEeCCCCC
Confidence 445555556778889999999999999999998875
No 48
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=55.41 E-value=41 Score=22.03 Aligned_cols=64 Identities=9% Similarity=0.058 Sum_probs=43.8
Q ss_pred HHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcC-CccEEEecCCCchhHh
Q 029874 90 KDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMG-LVRSIGIRYVGILNPC 168 (186)
Q Consensus 90 ~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G-~ir~iGvsn~~~~~l~ 168 (186)
++.++.+.....|++++.. -.. .+.++.+..+++.. .+.-|-+++.......
T Consensus 38 ~~a~~~l~~~~~dlvi~d~-~~~--------------------------~~g~~~~~~l~~~~~~~pii~ls~~~~~~~~ 90 (142)
T 2qxy_A 38 QEAFTFLRREKIDLVFVDV-FEG--------------------------EESLNLIRRIREEFPDTKVAVLSAYVDKDLI 90 (142)
T ss_dssp HHHHHHHTTSCCSEEEEEC-TTT--------------------------HHHHHHHHHHHHHCTTCEEEEEESCCCHHHH
T ss_pred HHHHHHHhccCCCEEEEeC-CCC--------------------------CcHHHHHHHHHHHCCCCCEEEEECCCCHHHH
Confidence 3444455556789999886 221 23466777777654 4888999998888777
Q ss_pred hHHhhccCCCCC
Q 029874 169 EHSIRSSKFSTK 180 (186)
Q Consensus 169 ~~~~~~~~~~~~ 180 (186)
..+++.|..++.
T Consensus 91 ~~~~~~g~~~~l 102 (142)
T 2qxy_A 91 INSVKAGAVDYI 102 (142)
T ss_dssp HHHHHHTCSCEE
T ss_pred HHHHHCCcceeE
Confidence 888888877643
No 49
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=54.44 E-value=85 Score=25.40 Aligned_cols=39 Identities=10% Similarity=-0.146 Sum_probs=26.2
Q ss_pred HHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCCCCc
Q 029874 142 WHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTKF 181 (186)
Q Consensus 142 ~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~~ 181 (186)
|+.+.++++.=.+--|+...++ .+-++.+++.+..|.+.
T Consensus 283 ~~~~~~v~~~~~iPvi~~Ggit-~~~a~~~l~~g~aD~V~ 321 (364)
T 1vyr_A 283 EAFRQKVRERFHGVIIGAGAYT-AEKAEDLIGKGLIDAVA 321 (364)
T ss_dssp HHHHHHHHHHCCSEEEEESSCC-HHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHHHCCCCEEEECCcC-HHHHHHHHHCCCccEEE
Confidence 3445566665566778888885 44488888888877543
No 50
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=53.17 E-value=76 Score=24.49 Aligned_cols=48 Identities=13% Similarity=0.273 Sum_probs=34.4
Q ss_pred CccccccccCCch----hHHHHHHHHHHhCCceEeCCC-----CCC-CHHHHHHHHHH
Q 029874 12 PIIGLGVWRMDES----NIRDLIINAIKIGYRHIDCAA-----DYR-NEAEVGEALAE 59 (186)
Q Consensus 12 ~~lglG~~~~~~~----~~~~~l~~a~~~Gi~~~Dta~-----~Yg-~e~~vG~~l~~ 59 (186)
.++|+-+|.+... ...+.++.+-++|+..++... .|+ .-..+.+.+++
T Consensus 13 ~~~g~~~~s~~~~~~~~~~~~~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~ 70 (303)
T 3l23_A 13 KEIGLQIYSLSQELYKGDVAANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAED 70 (303)
T ss_dssp CCCEEEGGGGGGGGGSSCHHHHHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHH
T ss_pred CceEEEEEEchhhhccCCHHHHHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHH
Confidence 3577777776553 578999999999999999865 344 34556666655
No 51
>1vpq_A Hypothetical protein TM1631; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.1.32.1
Probab=50.73 E-value=86 Score=24.38 Aligned_cols=68 Identities=21% Similarity=0.341 Sum_probs=49.0
Q ss_pred CCceEeC-CCCCC--CHHHHHHHHHHHhhcCCccccceEEEeccCCC-------Ch---hHHHHHHHHHHHHh--CCCcc
Q 029874 37 GYRHIDC-AADYR--NEAEVGEALAEAFSTGLVKREDLFITTKLWNS-------DH---GHVLEACKDSLKKL--QLDYL 101 (186)
Q Consensus 37 Gi~~~Dt-a~~Yg--~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~~-------~~---~~i~~~~~~sl~~L--g~~~l 101 (186)
-++.++. +..|+ +...+.++.++ ..+++..+.|++.. +. ....+.+.++++-| | +.+
T Consensus 49 ~F~tVEiNsTFY~~p~~~t~~~W~~~-------tP~~F~F~vKa~r~iTh~~~~~~~~~~~~~~~F~~~~~pL~~~-~kL 120 (273)
T 1vpq_A 49 GFRIVELNFTYYTQPSWRSFVQMLRK-------TPPDFYFTVKTPGSVTHVLWKEGKDPKEDMENFTRQIEPLIEE-QRL 120 (273)
T ss_dssp CCCEEEECCCSSSSSCHHHHHHHHTT-------SCTTCEEEEECCHHHHHTHHHHTCCSHHHHHHHHHHHHHHHHT-TCE
T ss_pred CCCeEEECccccCCCCHHHHHHHHHh-------CCCCeEEEEEeChhhcccccccccchHHHHHHHHHHHHhhccC-CCE
Confidence 6787776 67887 68899999876 46789999998542 11 23334555677788 6 789
Q ss_pred cEEEEecCCCC
Q 029874 102 DLYLVHFPVAT 112 (186)
Q Consensus 102 Dl~~lH~p~~~ 112 (186)
..+++-.|...
T Consensus 121 G~vL~Q~Ppsf 131 (273)
T 1vpq_A 121 KMTLAQFPFSF 131 (273)
T ss_dssp EEEEEECCTTC
T ss_pred EEEEEEcCCCC
Confidence 99999988544
No 52
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=50.60 E-value=50 Score=26.05 Aligned_cols=88 Identities=11% Similarity=-0.013 Sum_probs=52.0
Q ss_pred ccccccccCCchh-HHHHHHHHHHhCCceEeCCCCCCC-------HHHHHHHHHHHhhcCCccccceEEEecc--CCCCh
Q 029874 13 IIGLGVWRMDESN-IRDLIINAIKIGYRHIDCAADYRN-------EAEVGEALAEAFSTGLVKREDLFITTKL--WNSDH 82 (186)
Q Consensus 13 ~lglG~~~~~~~~-~~~~l~~a~~~Gi~~~Dta~~Yg~-------e~~vG~~l~~~~~~~~~~R~~~~i~tK~--~~~~~ 82 (186)
++.+-+..+...+ ...+.+.|.++|.-|+=|+..|+. -..+-+++++..........++ ..|. ...+.
T Consensus 160 KVIlEt~~L~d~e~i~~A~~ia~eaGADfVKTSTGf~~~gAT~edv~lm~~~v~~~~~~~~~tg~~v--gVKaaGGIrt~ 237 (281)
T 2a4a_A 160 KVIIEVGELKTEDLIIKTTLAVLNGNADFIKTSTGKVQINATPSSVEYIIKAIKEYIKNNPEKNNKI--GLKVSGGISDL 237 (281)
T ss_dssp EEECCHHHHCSHHHHHHHHHHHHTTTCSEEECCCSCSSCCCCHHHHHHHHHHHHHHHHHCGGGTTCC--EEEEESSCCSH
T ss_pred EEEEecccCCcHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHhhcccccCCCCc--eEEEeCCCCCH
Confidence 3455655555555 678999999999999999998851 2344455543210000001222 3333 34488
Q ss_pred hHHHHHHHHHHHHhCCCccc
Q 029874 83 GHVLEACKDSLKKLQLDYLD 102 (186)
Q Consensus 83 ~~i~~~~~~sl~~Lg~~~lD 102 (186)
++..+-++..-+.||-+|++
T Consensus 238 e~al~~i~aga~~lG~~w~~ 257 (281)
T 2a4a_A 238 NTASHYILLARRFLSSLACH 257 (281)
T ss_dssp HHHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHhhhhccccccc
Confidence 88999999988988877554
No 53
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=47.87 E-value=1.1e+02 Score=24.75 Aligned_cols=38 Identities=11% Similarity=-0.175 Sum_probs=25.8
Q ss_pred HHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCCCCc
Q 029874 143 HAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTKF 181 (186)
Q Consensus 143 ~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~~ 181 (186)
+.+.++++.=.+--|++..++. +-++.+++.+..|.+.
T Consensus 283 ~~~~~i~~~~~iPvi~~Ggi~~-~~a~~~l~~g~aD~V~ 320 (365)
T 2gou_A 283 SFKRALREAYQGVLIYAGRYNA-EKAEQAINDGLADMIG 320 (365)
T ss_dssp HHHHHHHHHCCSEEEEESSCCH-HHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHHCCCcEEEeCCCCH-HHHHHHHHCCCcceeh
Confidence 4455556554567788888854 4488888888887543
No 54
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=45.02 E-value=1.1e+02 Score=23.78 Aligned_cols=76 Identities=12% Similarity=0.217 Sum_probs=51.5
Q ss_pred chhHHHHHHHHHHhCCceEeCCCCCC--CHHHHHHHHHHHhhcCCccccceEEEeccCCC--------ChhHHHHHHHHH
Q 029874 23 ESNIRDLIINAIKIGYRHIDCAADYR--NEAEVGEALAEAFSTGLVKREDLFITTKLWNS--------DHGHVLEACKDS 92 (186)
Q Consensus 23 ~~~~~~~l~~a~~~Gi~~~Dta~~Yg--~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~~--------~~~~i~~~~~~s 92 (186)
+....+.++.|-+.|+..++.|...- ++..--++++.. .+..+.+.+-+... ++....+.++.-
T Consensus 84 qg~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~------~~~G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~ 157 (251)
T 1qwg_A 84 KGKFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRA------KDNGFMVLTEVGKKMPDKDKQLTIDDRIKLINFD 157 (251)
T ss_dssp TTCHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHH------HHTTCEEEEEECCSSHHHHTTCCHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHH------HHCCCEEeeeccccCCcccCCCCHHHHHHHHHHH
Confidence 34667888888889999999988875 677777788775 33445555444332 556666777776
Q ss_pred HHHhCCCcccEEEEec
Q 029874 93 LKKLQLDYLDLYLVHF 108 (186)
Q Consensus 93 l~~Lg~~~lDl~~lH~ 108 (186)
|++ | .|.+++-.
T Consensus 158 LeA-G---A~~ViiEa 169 (251)
T 1qwg_A 158 LDA-G---ADYVIIEG 169 (251)
T ss_dssp HHH-T---CSEEEECC
T ss_pred HHC-C---CcEEEEee
Confidence 666 5 55667664
No 55
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=44.62 E-value=1.2e+02 Score=24.38 Aligned_cols=38 Identities=8% Similarity=0.037 Sum_probs=24.7
Q ss_pred HHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 143 HAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 143 ~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
+.+..+++.=.+--|++..+...+-++.+++.|..|.+
T Consensus 285 ~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD~V 322 (363)
T 3l5l_A 285 PIAERVRREAKLPVTSAWGFGTPQLAEAALQANQLDLV 322 (363)
T ss_dssp HHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCccEE
Confidence 33444444435667777777666668888888887743
No 56
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=43.93 E-value=96 Score=22.98 Aligned_cols=51 Identities=12% Similarity=0.155 Sum_probs=34.7
Q ss_pred cCCccccccccC-CchhHHHHHHHHHHhCCceEeCCCCC---CCHHHHHHHHHHH
Q 029874 10 KMPIIGLGVWRM-DESNIRDLIINAIKIGYRHIDCAADY---RNEAEVGEALAEA 60 (186)
Q Consensus 10 ~v~~lglG~~~~-~~~~~~~~l~~a~~~Gi~~~Dta~~Y---g~e~~vG~~l~~~ 60 (186)
...++|+-++.+ ......+.+..+-+.|+..++..... ..-..+.+.+++.
T Consensus 3 ~~~~lg~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~ 57 (275)
T 3qc0_A 3 QVEGLSINLATIREQCGFAEAVDICLKHGITAIAPWRDQVAAIGLGEAGRIVRAN 57 (275)
T ss_dssp CCTTEEEEGGGGTTTCCHHHHHHHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHH
T ss_pred CcccceeeeeeccCCCCHHHHHHHHHHcCCCEEEeccccccccCHHHHHHHHHHc
Confidence 456788888777 55567889999999999999976531 1233444555543
No 57
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=42.83 E-value=69 Score=27.55 Aligned_cols=37 Identities=11% Similarity=0.068 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHcCCccEEEecCCCchhHhhHHhhcc
Q 029874 138 LETTWHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSS 175 (186)
Q Consensus 138 ~~~~~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~ 175 (186)
+.++++-..+.+++|+..+||+-. |..++.+.+++.+
T Consensus 214 ldeal~~~~~a~~~~~~~SIg~~G-Naadv~~~l~~~~ 250 (551)
T 1x87_A 214 LDAALEMAKQAKEEKKALSIGLVG-NAAEVLPRLVETG 250 (551)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEES-CHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCceEEEEec-cHHHHHHHHHHCC
Confidence 678999999999999999999987 8888888887774
No 58
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=42.55 E-value=21 Score=21.21 Aligned_cols=19 Identities=21% Similarity=0.309 Sum_probs=16.8
Q ss_pred cHHHHHHHHHHHHHcCCcc
Q 029874 137 SLETTWHAMEDLVSMGLVR 155 (186)
Q Consensus 137 ~~~~~~~~l~~l~~~G~ir 155 (186)
+-++++++|.+|.++|+|+
T Consensus 38 ~kdeV~~~LrrLe~KGLI~ 56 (59)
T 2xvc_A 38 EKQEVVKLLEALKNKGLIA 56 (59)
T ss_dssp CHHHHHHHHHHHHHTTSEE
T ss_pred CHHHHHHHHHHHHHCCCee
Confidence 3578999999999999987
No 59
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=42.47 E-value=50 Score=21.54 Aligned_cols=41 Identities=17% Similarity=0.162 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHcC-CccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 140 TTWHAMEDLVSMG-LVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 140 ~~~~~l~~l~~~G-~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
+.++.+..+++.+ .+.-|-+|.+........+++.|..++.
T Consensus 66 ~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l 107 (136)
T 3kto_A 66 SGIELLETLVKRGFHLPTIVMASSSDIPTAVRAMRASAADFI 107 (136)
T ss_dssp HHHHHHHHHHHTTCCCCEEEEESSCCHHHHHHHHHTTCSEEE
T ss_pred cHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHcChHHhe
Confidence 3577777888765 5888999998888878888888877643
No 60
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=42.16 E-value=68 Score=27.57 Aligned_cols=116 Identities=16% Similarity=0.101 Sum_probs=73.4
Q ss_pred HHHHHHHHHhCCceEe--CCCCC---CCHHHHH-------HHHHHHhhcCCccccceEEEeccCCCChhHHHH-------
Q 029874 27 RDLIINAIKIGYRHID--CAADY---RNEAEVG-------EALAEAFSTGLVKREDLFITTKLWNSDHGHVLE------- 87 (186)
Q Consensus 27 ~~~l~~a~~~Gi~~~D--ta~~Y---g~e~~vG-------~~l~~~~~~~~~~R~~~~i~tK~~~~~~~~i~~------- 87 (186)
-+-....-+.|+..+= ||..| |++.++- ++-++.+.. -.+..+++++-+..-+-.+-++
T Consensus 111 ~e~f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~rk~~gg--~L~G~~~lTaGLGGMgGAQplA~~mag~v 188 (552)
T 2fkn_A 111 WEHFHELEKKGLMMYGQMTAGSWIYIGSQGILQGTYETFAELARQHFGG--SLKGTLTLTAGLGGMGGAQPLSVTMNEGV 188 (552)
T ss_dssp HHHHHHHHHTTCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHHHHSSS--CCTTCEEEEECCSTTTTHHHHHHHHTTCE
T ss_pred HHHHHHHHHcccccccCccccceeeecCcceeecHHHHHHHHHHHhcCC--CCCceEEEEecCCccchhhHHHHHHcCce
Confidence 3455666677888663 55444 4555443 333333222 2567788888875432111100
Q ss_pred ------HHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEEecC
Q 029874 88 ------ACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGIRY 161 (186)
Q Consensus 88 ------~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvsn 161 (186)
.-...-+|+.+.|+|.+. . ++.++++-..+.+++|+..+||+-.
T Consensus 189 ~i~~Evd~~ri~~R~~~gyld~~~-~-----------------------------~ldeal~~~~~a~~~~~~~SIg~~G 238 (552)
T 2fkn_A 189 VIAVEVDEKRIDKRIETKYCDRKT-A-----------------------------SIEEALAWAEEAKLAGKPLSIALLG 238 (552)
T ss_dssp EEEEESCHHHHHHHHHTTSCSEEE-S-----------------------------CHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred EEEEEECHHHHHHHHhCCcceeEc-C-----------------------------CHHHHHHHHHHHHHcCCceEEEEec
Confidence 012233577788998863 1 2678999999999999999999987
Q ss_pred CCchhHhhHHhhcc
Q 029874 162 VGILNPCEHSIRSS 175 (186)
Q Consensus 162 ~~~~~l~~~~~~~~ 175 (186)
|..++.+.+++.+
T Consensus 239 -Naadv~~~l~~~~ 251 (552)
T 2fkn_A 239 -NAAEVHHTLLNRG 251 (552)
T ss_dssp -CHHHHHHHHHTTT
T ss_pred -cHHHHHHHHHHCC
Confidence 8888888887774
No 61
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=42.14 E-value=62 Score=20.38 Aligned_cols=39 Identities=5% Similarity=-0.254 Sum_probs=27.7
Q ss_pred HHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 142 WHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 142 ~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
++.+..+++...+.-|-++++........+++.|..++.
T Consensus 63 ~~~~~~l~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l 101 (123)
T 1xhf_A 63 LLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYI 101 (123)
T ss_dssp HHHHHHHHHHCCCEEEEEESCCSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHhCCCCcEEEEECCCChHHHHHHHhcCcceEE
Confidence 455566665567888889988877767777888776643
No 62
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=41.81 E-value=76 Score=21.20 Aligned_cols=65 Identities=11% Similarity=0.046 Sum_probs=43.9
Q ss_pred HHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHc---CCccEEEecCCCchh
Q 029874 90 KDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSM---GLVRSIGIRYVGILN 166 (186)
Q Consensus 90 ~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---G~ir~iGvsn~~~~~ 166 (186)
++.++.+.....|++++...-.. .+.++.+..+++. ..+.-|-++......
T Consensus 41 ~~al~~l~~~~~dlii~D~~l~~--------------------------~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~ 94 (154)
T 3gt7_A 41 REAVRFLSLTRPDLIISDVLMPE--------------------------MDGYALCRWLKGQPDLRTIPVILLTILSDPR 94 (154)
T ss_dssp HHHHHHHTTCCCSEEEEESCCSS--------------------------SCHHHHHHHHHHSTTTTTSCEEEEECCCSHH
T ss_pred HHHHHHHHhCCCCEEEEeCCCCC--------------------------CCHHHHHHHHHhCCCcCCCCEEEEECCCChH
Confidence 34445555567899998763211 1246667777765 467889999888888
Q ss_pred HhhHHhhccCCCCC
Q 029874 167 PCEHSIRSSKFSTK 180 (186)
Q Consensus 167 l~~~~~~~~~~~~~ 180 (186)
....+++.|..++.
T Consensus 95 ~~~~~~~~g~~~~l 108 (154)
T 3gt7_A 95 DVVRSLECGADDFI 108 (154)
T ss_dssp HHHHHHHHCCSEEE
T ss_pred HHHHHHHCCCCEEE
Confidence 78888888876643
No 63
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=41.81 E-value=46 Score=26.37 Aligned_cols=82 Identities=6% Similarity=0.045 Sum_probs=47.4
Q ss_pred ccccccccCCchhHHHHHHHHHHhCCceEeCCCCCC----CHHHHHHHHHHHhhcCCccccceEEEeccCCCChhHHHHH
Q 029874 13 IIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYR----NEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGHVLEA 88 (186)
Q Consensus 13 ~lglG~~~~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg----~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~~~~~~i~~~ 88 (186)
++.+=+..++.++...+.+.|.++|.-|+=|+..|+ +...+ +.+++.++. ...++-|-.-....+.++..+-
T Consensus 177 KVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTGf~~~GAT~edv-~lmr~~v~~---~g~~v~VKAAGGIrt~edAl~m 252 (288)
T 3oa3_A 177 KVILETSQLTADEIIAGCVLSSLAGADYVKTSTGFNGPGASIENV-SLMSAVCDS---LQSETRVKASGGIRTIEDCVKM 252 (288)
T ss_dssp EEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCSSSSCCCCHHHH-HHHHHHHHH---SSSCCEEEEESSCCSHHHHHHH
T ss_pred eEEEECCCCCHHHHHHHHHHHHHcCCCEEEcCCCCCCCCCCHHHH-HHHHHHHHH---hCCCceEEEeCCCCCHHHHHHH
Confidence 444555456777788899999999999999999885 22222 334443211 0122222222234466777776
Q ss_pred HHHHHHHhCC
Q 029874 89 CKDSLKKLQL 98 (186)
Q Consensus 89 ~~~sl~~Lg~ 98 (186)
++..-.|+|+
T Consensus 253 i~aGA~RiGt 262 (288)
T 3oa3_A 253 VRAGAERLGA 262 (288)
T ss_dssp HHTTCSEEEE
T ss_pred HHcCCceeeh
Confidence 6654455554
No 64
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=41.26 E-value=73 Score=20.82 Aligned_cols=64 Identities=9% Similarity=0.068 Sum_probs=43.6
Q ss_pred HHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHH---cCCccEEEecCCCchh
Q 029874 90 KDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVS---MGLVRSIGIRYVGILN 166 (186)
Q Consensus 90 ~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~---~G~ir~iGvsn~~~~~ 166 (186)
++.++.+.....|++++...-.. .+.++.+..+++ ...+.-|-+++.....
T Consensus 41 ~~a~~~l~~~~~dlii~D~~l~~--------------------------~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~ 94 (144)
T 3kht_A 41 AKALYQVQQAKYDLIILDIGLPI--------------------------ANGFEVMSAVRKPGANQHTPIVILTDNVSDD 94 (144)
T ss_dssp HHHHHHHTTCCCSEEEECTTCGG--------------------------GCHHHHHHHHHSSSTTTTCCEEEEETTCCHH
T ss_pred HHHHHHhhcCCCCEEEEeCCCCC--------------------------CCHHHHHHHHHhcccccCCCEEEEeCCCCHH
Confidence 34445555567899888753111 124667777776 3468889999988888
Q ss_pred HhhHHhhccCCCC
Q 029874 167 PCEHSIRSSKFST 179 (186)
Q Consensus 167 l~~~~~~~~~~~~ 179 (186)
....+++.|..++
T Consensus 95 ~~~~~~~~ga~~~ 107 (144)
T 3kht_A 95 RAKQCMAAGASSV 107 (144)
T ss_dssp HHHHHHHTTCSEE
T ss_pred HHHHHHHcCCCEE
Confidence 7888888887664
No 65
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=41.24 E-value=1.3e+02 Score=23.56 Aligned_cols=133 Identities=14% Similarity=0.039 Sum_probs=75.5
Q ss_pred CCccccccccCCchhHHHHHHHHHH-hCCceEeCCCCCCC---HHHHHHHHHHHhhcCCccccceEEE-eccCCCChhHH
Q 029874 11 MPIIGLGVWRMDESNIRDLIINAIK-IGYRHIDCAADYRN---EAEVGEALAEAFSTGLVKREDLFIT-TKLWNSDHGHV 85 (186)
Q Consensus 11 v~~lglG~~~~~~~~~~~~l~~a~~-~Gi~~~Dta~~Yg~---e~~vG~~l~~~~~~~~~~R~~~~i~-tK~~~~~~~~i 85 (186)
=|++-+||..++.. +.+..|++ +|...+-.|-.=-+ ...-...+.- +++..+.+. +--...+.+..
T Consensus 19 ~SRl~~Gtgky~~~---~~~~~a~~asg~e~vtva~rR~~~~~~~~~~~~~~~------i~~~~~~~lpNTag~~ta~eA 89 (265)
T 1wv2_A 19 GSRLLVGTGKYKDL---DETRRAIEASGAEIVTVAVRRTNIGQNPDEPNLLDV------IPPDRYTILPNTAGCYDAVEA 89 (265)
T ss_dssp SCCEEECCSCSSSH---HHHHHHHHHSCCSEEEEEGGGCCC-------------------CTTTSEEEEECTTCCSHHHH
T ss_pred ecceEEecCCCCCH---HHHHHHHHHhCCCeEEEEEEeeccccCCCcchHHhh------hhhcCCEECCcCCCCCCHHHH
Confidence 47888888777543 45566654 47666654421111 1111222222 344455443 33345577777
Q ss_pred HHHHHHHHH-HhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEEecCCCc
Q 029874 86 LEACKDSLK-KLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGIRYVGI 164 (186)
Q Consensus 86 ~~~~~~sl~-~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvsn~~~ 164 (186)
.+..+-..+ .++++++-+-.+..+... ..+..++.++.+.|+++|.. .+-+++ +.
T Consensus 90 v~~a~lare~~~~~~~iKlEv~~d~~~l----------------------lpD~~~tv~aa~~L~~~Gf~-Vlpy~~-dd 145 (265)
T 1wv2_A 90 VRTCRLARELLDGHNLVKLEVLADQKTL----------------------FPNVVETLKAAEQLVKDGFD-VMVYTS-DD 145 (265)
T ss_dssp HHHHHHHHTTTTSCCEEEECCBSCTTTC----------------------CBCHHHHHHHHHHHHTTTCE-EEEEEC-SC
T ss_pred HHHHHHHHHHcCCCCeEEEEeecCcccc----------------------CcCHHHHHHHHHHHHHCCCE-EEEEeC-CC
Confidence 777777788 788888877776554332 12367899999999999864 333444 33
Q ss_pred hhHhhHHhhccC
Q 029874 165 LNPCEHSIRSSK 176 (186)
Q Consensus 165 ~~l~~~~~~~~~ 176 (186)
..+.+++.+.|.
T Consensus 146 ~~~akrl~~~G~ 157 (265)
T 1wv2_A 146 PIIARQLAEIGC 157 (265)
T ss_dssp HHHHHHHHHSCC
T ss_pred HHHHHHHHHhCC
Confidence 455777766553
No 66
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=40.62 E-value=1.4e+02 Score=24.03 Aligned_cols=120 Identities=13% Similarity=0.051 Sum_probs=68.2
Q ss_pred CchhHHHHHHHHHHhCCceEeCCCCCCC-H-HHHHHHHHHHhhcCCccccceEEEeccC-CCChhHHHHHHHHHHHHhCC
Q 029874 22 DESNIRDLIINAIKIGYRHIDCAADYRN-E-AEVGEALAEAFSTGLVKREDLFITTKLW-NSDHGHVLEACKDSLKKLQL 98 (186)
Q Consensus 22 ~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~-e-~~vG~~l~~~~~~~~~~R~~~~i~tK~~-~~~~~~i~~~~~~sl~~Lg~ 98 (186)
+.++..+....+.+.|++.|..--...+ + ..+=+++++.+ | .++.|..+.- ..+.+...+-++ .|+.+++
T Consensus 164 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~e~v~avr~a~--g----~d~~l~vDan~~~~~~~a~~~~~-~l~~~~i 236 (388)
T 2nql_A 164 TLKARGELAKYWQDRGFNAFKFATPVADDGPAAEIANLRQVL--G----PQAKIAADMHWNQTPERALELIA-EMQPFDP 236 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTTCHHHHHHHHHHHH--C----TTSEEEEECCSCSCHHHHHHHHH-HHGGGCC
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCCCCChHHHHHHHHHHHHh--C----CCCEEEEECCCCCCHHHHHHHHH-HHhhcCC
Confidence 4566677778888999998874211111 1 33334455431 2 3455555542 235555555444 3777777
Q ss_pred CcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCC
Q 029874 99 DYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFS 178 (186)
Q Consensus 99 ~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~ 178 (186)
+++ ..|-.. +-|+.+.++++.-.|--++--++...+-.+.+++.+..|
T Consensus 237 ~~i-----EqP~~~---------------------------~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d 284 (388)
T 2nql_A 237 WFA-----EAPVWT---------------------------EDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRIA 284 (388)
T ss_dssp SCE-----ECCSCT---------------------------TCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCS
T ss_pred CEE-----ECCCCh---------------------------hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCC
Confidence 654 333211 126777777776566666655555555577788888777
Q ss_pred CC
Q 029874 179 TK 180 (186)
Q Consensus 179 ~~ 180 (186)
.+
T Consensus 285 ~v 286 (388)
T 2nql_A 285 IV 286 (388)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 67
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=40.32 E-value=1.4e+02 Score=23.73 Aligned_cols=39 Identities=5% Similarity=-0.055 Sum_probs=25.8
Q ss_pred HHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 142 WHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 142 ~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
++.+.++++.=.+--|+...+...+-++.+++.|..|.+
T Consensus 266 ~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V 304 (338)
T 1z41_A 266 VSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLI 304 (338)
T ss_dssp HHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEE
Confidence 344455555445677787777656668888888877744
No 68
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=39.69 E-value=52 Score=25.65 Aligned_cols=81 Identities=5% Similarity=-0.006 Sum_probs=48.0
Q ss_pred ccccccccCCchhHHHHHHHHHHhCCceEeCCCCCC---CHHHHHHHHHHHhhcCCccccceEEEeccCCCChhHHHHHH
Q 029874 13 IIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYR---NEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGHVLEAC 89 (186)
Q Consensus 13 ~lglG~~~~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg---~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~~~~~~i~~~~ 89 (186)
++.+-+..++.++...+.+.|.++|..|+=|+..|+ .-..--+.+++.+ ..++-|-.-....+.++..+-+
T Consensus 162 KVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTGf~~~GAT~edV~lm~~~v------g~~v~VKaAGGIrt~~~al~mi 235 (260)
T 3r12_A 162 KVIIETCYLDTEEKIAACVISKLAGAHFVKTSTGFGTGGATAEDVHLMKWIV------GDEMGVKASGGIRTFEDAVKMI 235 (260)
T ss_dssp EEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCSSSSCCCCHHHHHHHHHHH------CTTSEEEEESSCCSHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHhCcCEEEcCCCCCCCCCCHHHHHHHHHHh------CCCceEEEeCCCCCHHHHHHHH
Confidence 445555566778889999999999999999999875 2111223333331 2222222222344666666665
Q ss_pred HHHHHHhCCC
Q 029874 90 KDSLKKLQLD 99 (186)
Q Consensus 90 ~~sl~~Lg~~ 99 (186)
+..-.|+|++
T Consensus 236 ~aGA~RiGtS 245 (260)
T 3r12_A 236 MYGADRIGTS 245 (260)
T ss_dssp HTTCSEEEES
T ss_pred HcCCceeecc
Confidence 5555555543
No 69
>2jrt_A Uncharacterized protein; solution, structure, NESG, PSI, target RHR5, structural genomics, protein structure initiative; NMR {Rhodobacter sphaeroides}
Probab=39.32 E-value=17 Score=23.78 Aligned_cols=63 Identities=16% Similarity=0.107 Sum_probs=45.6
Q ss_pred eeecCCCCcCCccccccccC---CchhHHHHHHHHHHhCCceEeCCCCCC-CHHHHHHHHHHHhhcC
Q 029874 2 AITLNNGFKMPIIGLGVWRM---DESNIRDLIINAIKIGYRHIDCAADYR-NEAEVGEALAEAFSTG 64 (186)
Q Consensus 2 ~~~~~tg~~v~~lglG~~~~---~~~~~~~~l~~a~~~Gi~~~Dta~~Yg-~e~~vG~~l~~~~~~~ 64 (186)
.+.|..|..+...+++.-.+ ..+.-.++|...+..+...-++|..|+ +...+-.|.+.+.+.|
T Consensus 11 ~~~g~~G~~~~~~~l~~~~~rrWs~~~Kl~VV~~~~~g~~s~~e~arry~Is~s~i~~W~r~~~~~G 77 (95)
T 2jrt_A 11 QVTLPDGTVLSRADLPPLDTRRWVASRKAAVVKAVIHGLITEREALDRYSLSEEEFALWRSAVAAHG 77 (95)
T ss_dssp EEECTTSCEEETTTSCCSSCCCCCHHHHHHHHHHHHTTSSCHHHHHHHTTCCHHHHHHHHHHTTTCC
T ss_pred eeeCCCCcccHHhcCChHhhhccCHHHHHHHHHHHHcCCCCHHHHHHHhCCCHHHHHHHHHHHHHHh
Confidence 34566666665555554322 445556788888888889999999999 8999999999875444
No 70
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=39.05 E-value=74 Score=20.28 Aligned_cols=65 Identities=14% Similarity=0.086 Sum_probs=42.1
Q ss_pred HHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcC-CccEEEecCCCchhHh
Q 029874 90 KDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMG-LVRSIGIRYVGILNPC 168 (186)
Q Consensus 90 ~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G-~ir~iGvsn~~~~~l~ 168 (186)
++.++.+.....|++++...-.. .+.++.+..+++.+ .+.-|-+++.......
T Consensus 41 ~~a~~~l~~~~~dlvi~d~~l~~--------------------------~~g~~~~~~l~~~~~~~~ii~~t~~~~~~~~ 94 (130)
T 3eod_A 41 VDALELLGGFTPDLMICDIAMPR--------------------------MNGLKLLEHIRNRGDQTPVLVISATENMADI 94 (130)
T ss_dssp HHHHHHHTTCCCSEEEECCC-------------------------------CHHHHHHHHHTTCCCCEEEEECCCCHHHH
T ss_pred HHHHHHHhcCCCCEEEEecCCCC--------------------------CCHHHHHHHHHhcCCCCCEEEEEcCCCHHHH
Confidence 34444555567899988753111 12456666777654 5788899998888777
Q ss_pred hHHhhccCCCCC
Q 029874 169 EHSIRSSKFSTK 180 (186)
Q Consensus 169 ~~~~~~~~~~~~ 180 (186)
..+++.|..++.
T Consensus 95 ~~~~~~g~~~~l 106 (130)
T 3eod_A 95 AKALRLGVEDVL 106 (130)
T ss_dssp HHHHHHCCSEEE
T ss_pred HHHHHcCCCEEE
Confidence 888888876643
No 71
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=38.87 E-value=79 Score=20.52 Aligned_cols=42 Identities=2% Similarity=-0.154 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHH---cCCccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 139 ETTWHAMEDLVS---MGLVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 139 ~~~~~~l~~l~~---~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
.+.++.+..+++ ...+.-|-+|.+........+++.|..++.
T Consensus 64 ~~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l 108 (140)
T 3lua_A 64 KEGLEVLSAIRNNSRTANTPVIIATKSDNPGYRHAALKFKVSDYI 108 (140)
T ss_dssp HHHHHHHHHHHHSGGGTTCCEEEEESCCCHHHHHHHHHSCCSEEE
T ss_pred CcHHHHHHHHHhCcccCCCCEEEEeCCCCHHHHHHHHHcCCCEEE
Confidence 345777777776 456888999998888878888888866643
No 72
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=38.30 E-value=78 Score=20.38 Aligned_cols=40 Identities=10% Similarity=-0.039 Sum_probs=29.1
Q ss_pred HHHHHHHHHHcC-CccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 141 TWHAMEDLVSMG-LVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 141 ~~~~l~~l~~~G-~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
.++.+..+++.. .+.-|-+++.........+++.|..++.
T Consensus 66 g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l 106 (137)
T 3hdg_A 66 GLEMLDRIKAGGAKPYVIVISAFSEMKYFIKAIELGVHLFL 106 (137)
T ss_dssp HHHHHHHHHHTTCCCEEEECCCCCCHHHHHHHHHHCCSEEC
T ss_pred HHHHHHHHHhcCCCCcEEEEecCcChHHHHHHHhCCcceeE
Confidence 456666677654 5778889988887777888888876643
No 73
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=38.15 E-value=68 Score=27.61 Aligned_cols=116 Identities=13% Similarity=0.094 Sum_probs=73.0
Q ss_pred HHHHHHHHHhCCceEe--CCCCC---CCHHHHH-------HHHHHHhhcCCccccceEEEeccCCCChhHHHH-------
Q 029874 27 RDLIINAIKIGYRHID--CAADY---RNEAEVG-------EALAEAFSTGLVKREDLFITTKLWNSDHGHVLE------- 87 (186)
Q Consensus 27 ~~~l~~a~~~Gi~~~D--ta~~Y---g~e~~vG-------~~l~~~~~~~~~~R~~~~i~tK~~~~~~~~i~~------- 87 (186)
-+-....-+.|+..+= ||..| |++.++- ++-++.+.. -.+..+++++-+..-+-.+-++
T Consensus 115 ~e~f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~rk~~gg--~L~G~~~lTaGLGGMgGAQplA~~mag~v 192 (557)
T 1uwk_A 115 WEHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYGG--SLKGKWVLTAGLGGMGGAQPLAATLAGAC 192 (557)
T ss_dssp HHHHHHHHHTTCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHHHHTSS--CCTTCEEEEECCSTTTTHHHHHHHHTTCE
T ss_pred HHHHHHHHHcccccccCccccceeeecCcceeecHHHHHHHHHHHhcCC--CCCceEEEEecCCccchhhHHHHHHcCce
Confidence 3455666677888663 55444 4554443 333333222 2567788888875432111100
Q ss_pred ------HHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEEecC
Q 029874 88 ------ACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGIRY 161 (186)
Q Consensus 88 ------~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvsn 161 (186)
.-...-+|+.+.|+|.+. .++.++++-..+.+++|+..+||+-.
T Consensus 193 ~i~~Evd~~ri~~R~~~gyld~~~------------------------------~~ldeal~~~~~a~~~~~~~SIg~~G 242 (557)
T 1uwk_A 193 SLNIESQQSRIDFRLETRYVDEQA------------------------------TDLDDALVRIAKYTAEGKAISIALHG 242 (557)
T ss_dssp EEEEESCHHHHHHHHHTTSCCEEC------------------------------SSHHHHHHHHHHHHHTTCCCEEEEES
T ss_pred EEEEEECHHHHHHHHhCCCceeEc------------------------------CCHHHHHHHHHHHHHcCCceEEEEec
Confidence 012233577788888752 12678999999999999999999987
Q ss_pred CCchhHhhHHhhcc
Q 029874 162 VGILNPCEHSIRSS 175 (186)
Q Consensus 162 ~~~~~l~~~~~~~~ 175 (186)
|..++.+.+++.+
T Consensus 243 -Naadv~~~l~~~~ 255 (557)
T 1uwk_A 243 -NAAEILPELVKRG 255 (557)
T ss_dssp -CHHHHHHHHHHHT
T ss_pred -cHHHHHHHHHHCC
Confidence 8888888887764
No 74
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=38.08 E-value=1.8e+02 Score=25.66 Aligned_cols=40 Identities=3% Similarity=-0.187 Sum_probs=30.5
Q ss_pred HHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCCCCc
Q 029874 142 WHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTKF 181 (186)
Q Consensus 142 ~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~~ 181 (186)
+....++++.=.+--|++..+...+.++.+++.+..|.+.
T Consensus 280 ~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~aD~V~ 319 (729)
T 1o94_A 280 IPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADIIG 319 (729)
T ss_dssp HHHHHHHHTTCSSCEECCSCCCCHHHHHHHHHTTSCSBEE
T ss_pred HHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHCCCCCEEE
Confidence 4555666776678888888887777789999999888543
No 75
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=37.98 E-value=1.5e+02 Score=23.61 Aligned_cols=39 Identities=5% Similarity=-0.041 Sum_probs=24.1
Q ss_pred HHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 142 WHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 142 ~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
++.+.++++.-.+--|++......+-++.+++.|..|.+
T Consensus 277 ~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V 315 (349)
T 3hgj_A 277 VPFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSADLV 315 (349)
T ss_dssp HHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHHcCceEEEECCCCCHHHHHHHHHCCCceEE
Confidence 344455555434666777666555557888888877743
No 76
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=37.19 E-value=89 Score=20.63 Aligned_cols=64 Identities=9% Similarity=0.139 Sum_probs=43.3
Q ss_pred HHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcC-CccEEEecCCCchhHh
Q 029874 90 KDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMG-LVRSIGIRYVGILNPC 168 (186)
Q Consensus 90 ~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G-~ir~iGvsn~~~~~l~ 168 (186)
++.++.+.....|++++...-.. .+.++.+..+++.+ .+.-|-+|+.......
T Consensus 56 ~~al~~l~~~~~dlii~D~~l~~--------------------------~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~ 109 (150)
T 4e7p_A 56 QEAIQLLEKESVDIAILDVEMPV--------------------------KTGLEVLEWIRSEKLETKVVVVTTFKRAGYF 109 (150)
T ss_dssp HHHHHHHTTSCCSEEEECSSCSS--------------------------SCHHHHHHHHHHTTCSCEEEEEESCCCHHHH
T ss_pred HHHHHHhhccCCCEEEEeCCCCC--------------------------CcHHHHHHHHHHhCCCCeEEEEeCCCCHHHH
Confidence 44555566667899998763211 12456666666653 5788899998888878
Q ss_pred hHHhhccCCCC
Q 029874 169 EHSIRSSKFST 179 (186)
Q Consensus 169 ~~~~~~~~~~~ 179 (186)
..+++.|..++
T Consensus 110 ~~~~~~g~~~~ 120 (150)
T 4e7p_A 110 ERAVKAGVDAY 120 (150)
T ss_dssp HHHHHTTCSEE
T ss_pred HHHHHCCCcEE
Confidence 88888887664
No 77
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=37.17 E-value=1.2e+02 Score=22.34 Aligned_cols=33 Identities=9% Similarity=0.250 Sum_probs=27.5
Q ss_pred ccccccccCCchhHHHHHHHHHHhCCceEeCCC
Q 029874 13 IIGLGVWRMDESNIRDLIINAIKIGYRHIDCAA 45 (186)
Q Consensus 13 ~lglG~~~~~~~~~~~~l~~a~~~Gi~~~Dta~ 45 (186)
+||+-+|.+......+.+..+-+.|+..++...
T Consensus 11 klg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~ 43 (262)
T 3p6l_A 11 RLGMQSYSFHLFPLTEALDKTQELGLKYIEIYP 43 (262)
T ss_dssp EEEEEGGGGTTSCHHHHHHHHHHTTCCEEEECT
T ss_pred EEEEEecccCCCCHHHHHHHHHHcCCCEEeecC
Confidence 477777877766788999999999999999764
No 78
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=36.54 E-value=50 Score=21.63 Aligned_cols=41 Identities=7% Similarity=0.114 Sum_probs=30.2
Q ss_pred HHHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCCCCc
Q 029874 141 TWHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTKF 181 (186)
Q Consensus 141 ~~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~~ 181 (186)
.++.+..+++...+.-|-+++.........+++.|..++..
T Consensus 63 g~~l~~~l~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~ 103 (136)
T 2qzj_A 63 GWTLCKKIRNVTTCPIVYMTYINEDQSILNALNSGGDDYLI 103 (136)
T ss_dssp HHHHHHHHHTTCCCCEEEEESCCCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHccCCCCCEEEEEcCCCHHHHHHHHHcCCcEEEE
Confidence 35666777766678888899888777777888888777443
No 79
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=35.95 E-value=1.2e+02 Score=26.18 Aligned_cols=19 Identities=5% Similarity=0.170 Sum_probs=15.3
Q ss_pred hhHHHHHHHHHHhCCceEe
Q 029874 24 SNIRDLIINAIKIGYRHID 42 (186)
Q Consensus 24 ~~~~~~l~~a~~~Gi~~~D 42 (186)
....+.+..|++.|++.+-
T Consensus 25 ~~l~~~ve~al~~Gv~~vQ 43 (540)
T 3nl6_A 25 KTLYGQVEAGLQNGVTLVQ 43 (540)
T ss_dssp CCHHHHHHHHHHTTCSEEE
T ss_pred chHHHHHHHHHHCCCCEEE
Confidence 3467889999999998873
No 80
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=35.72 E-value=70 Score=19.89 Aligned_cols=39 Identities=3% Similarity=-0.199 Sum_probs=27.1
Q ss_pred HHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 142 WHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 142 ~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
++.+..+++...+.-|-++..........+.+.|..++.
T Consensus 61 ~~~~~~l~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l 99 (120)
T 2a9o_A 61 LEVAKTIRKTSSVPILMLSAKDSEFDKVIGLELGADDYV 99 (120)
T ss_dssp HHHHHHHHHHCCCCEEEEESCCSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHhCCCCCEEEEecCCchHHHHHHHhCCHhheE
Confidence 445555555566888889988877767777787776643
No 81
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=35.70 E-value=1.8e+02 Score=23.65 Aligned_cols=37 Identities=5% Similarity=-0.170 Sum_probs=24.4
Q ss_pred HHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 143 HAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 143 ~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
+.+.++++.=.+--|+...++ .+.++.+++.+..|.+
T Consensus 289 ~~~~~ik~~~~iPvi~~Ggi~-~~~a~~~l~~g~aD~V 325 (377)
T 2r14_A 289 GFREQMRQRFKGGLIYCGNYD-AGRAQARLDDNTADAV 325 (377)
T ss_dssp THHHHHHHHCCSEEEEESSCC-HHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHCCCCEEEECCCC-HHHHHHHHHCCCceEE
Confidence 344455555456677777776 4558888888887744
No 82
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=35.38 E-value=82 Score=19.72 Aligned_cols=39 Identities=8% Similarity=-0.239 Sum_probs=28.0
Q ss_pred HHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 142 WHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 142 ~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
++.+..+++...+.-|-+|..........+++.|..++.
T Consensus 62 ~~~~~~l~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l 100 (122)
T 1zgz_A 62 LMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYV 100 (122)
T ss_dssp HHHHHHHHTTCCCEEEEEESSCCHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHhcCCCCEEEEECCCChhhHHHHHHhCHHHHc
Confidence 455666666556788889988877767777888877643
No 83
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=35.30 E-value=72 Score=23.72 Aligned_cols=42 Identities=5% Similarity=-0.164 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 139 ETTWHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 139 ~~~~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
.+-++.+.++++...+.-|-+|.+........+++.|..++.
T Consensus 94 ~~G~~l~~~lr~~~~~~iI~lt~~~~~~~~~~a~~~Ga~~yl 135 (249)
T 3q9s_A 94 FDGGDVVQRLRKNSALPIIVLTARDTVEEKVRLLGLGADDYL 135 (249)
T ss_dssp HHHHHHHHHHHTTCCCCEEEEESCCSHHHHHHHHHHTCSEEE
T ss_pred CCHHHHHHHHHcCCCCCEEEEECCCCHHHHHHHHHCCCcEEE
Confidence 456777888887777899999999888878888888877643
No 84
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=34.79 E-value=1.1e+02 Score=23.52 Aligned_cols=35 Identities=14% Similarity=0.333 Sum_probs=27.8
Q ss_pred CccccccccCCch---hHHHHHHHHHHhCCceEeCCCC
Q 029874 12 PIIGLGVWRMDES---NIRDLIINAIKIGYRHIDCAAD 46 (186)
Q Consensus 12 ~~lglG~~~~~~~---~~~~~l~~a~~~Gi~~~Dta~~ 46 (186)
.++|+-+|.+... ...+.+..+-+.|+..|+....
T Consensus 21 ~~~g~~~~s~~~~~~~~l~~~l~~aa~~G~~~VEl~~~ 58 (305)
T 3obe_A 21 KKMGLQTYSLGQELLQDMPNGLNRLAKAGYTDLEIFGY 58 (305)
T ss_dssp CCCEEEGGGGTHHHHTTHHHHHHHHHHHTCCEEEECCB
T ss_pred CceEEEEEEchhhhhcCHHHHHHHHHHcCCCEEEeccc
Confidence 3578878877654 6788999999999999998753
No 85
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=34.36 E-value=1.8e+02 Score=23.31 Aligned_cols=39 Identities=5% Similarity=0.037 Sum_probs=27.7
Q ss_pred HHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 142 WHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 142 ~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
++...++++.=.+--|++..+...+.++.+++.|..|.+
T Consensus 266 ~~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V 304 (343)
T 3kru_A 266 VKYAETIKKRCNIKTSAVGLITTQELAEEILSNERADLV 304 (343)
T ss_dssp HHHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTTSCSEE
T ss_pred ehHHHHHHHhcCcccceeeeeeHHHHHHHHHhchhhHHH
Confidence 444455555445777888888777778999999988844
No 86
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=34.35 E-value=1.8e+02 Score=23.47 Aligned_cols=22 Identities=18% Similarity=0.376 Sum_probs=17.2
Q ss_pred CchhHHHHHHHHHHhCCceEeC
Q 029874 22 DESNIRDLIINAIKIGYRHIDC 43 (186)
Q Consensus 22 ~~~~~~~~l~~a~~~Gi~~~Dt 43 (186)
+.++..+....+.+.|++.|..
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKi 173 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKV 173 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEE
Confidence 4566677778888999998875
No 87
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=33.44 E-value=98 Score=20.02 Aligned_cols=39 Identities=8% Similarity=-0.083 Sum_probs=28.6
Q ss_pred HHHHHHHHHHc---CCccEEEecCCCchhHhhHHhhccCCCC
Q 029874 141 TWHAMEDLVSM---GLVRSIGIRYVGILNPCEHSIRSSKFST 179 (186)
Q Consensus 141 ~~~~l~~l~~~---G~ir~iGvsn~~~~~l~~~~~~~~~~~~ 179 (186)
.++.+..+++. ..+.-|-+++.........+++.|..++
T Consensus 77 g~~~~~~l~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~ 118 (149)
T 1k66_A 77 GREVLQEIKQDEVLKKIPVVIMTTSSNPKDIEICYSYSISSY 118 (149)
T ss_dssp HHHHHHHHTTSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHhCcccCCCeEEEEeCCCCHHHHHHHHHCCCCEE
Confidence 46667777765 3578888998887777777788776663
No 88
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=32.68 E-value=96 Score=19.67 Aligned_cols=39 Identities=8% Similarity=-0.008 Sum_probs=29.4
Q ss_pred HHHHHHHHHHc---CCccEEEecCCCchhHhhHHhhccCCCC
Q 029874 141 TWHAMEDLVSM---GLVRSIGIRYVGILNPCEHSIRSSKFST 179 (186)
Q Consensus 141 ~~~~l~~l~~~---G~ir~iGvsn~~~~~l~~~~~~~~~~~~ 179 (186)
-++.+.++++. ..+.-|-+|..........+++.|-.++
T Consensus 61 g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~~ 102 (122)
T 3gl9_A 61 GFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARKV 102 (122)
T ss_dssp HHHHHHHHHTSTTTTTSCEEEEESCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHhcccccCCCEEEEecCCchHHHHHHHhcChhhh
Confidence 46667777664 3578899999888887888888887664
No 89
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=32.62 E-value=99 Score=19.82 Aligned_cols=40 Identities=3% Similarity=-0.098 Sum_probs=29.5
Q ss_pred HHHHHHHHHHc--CCccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 141 TWHAMEDLVSM--GLVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 141 ~~~~l~~l~~~--G~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
.++.++.+++. ..+.-|-++..........+++.|..++.
T Consensus 67 g~~~~~~l~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l 108 (136)
T 3hdv_A 67 GLDLIRTIRASERAALSIIVVSGDTDVEEAVDVMHLGVVDFL 108 (136)
T ss_dssp HHHHHHHHHTSTTTTCEEEEEESSCCHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCChHHHHHHHhCCcceEE
Confidence 46667777765 45788999988888777888888866643
No 90
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=32.16 E-value=1e+02 Score=19.94 Aligned_cols=40 Identities=3% Similarity=-0.065 Sum_probs=28.6
Q ss_pred HHHHHHHHHHc---CCccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 141 TWHAMEDLVSM---GLVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 141 ~~~~l~~l~~~---G~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
-++.+..+++. ..+.-|-+|.+........+++.|..++.
T Consensus 63 g~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~ga~~~l 105 (136)
T 3t6k_A 63 GYTLCKRVRQHPLTKTLPILMLTAQGDISAKIAGFEAGANDYL 105 (136)
T ss_dssp HHHHHHHHHHSGGGTTCCEEEEECTTCHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHcCCCcCCccEEEEecCCCHHHHHHHHhcCcceEE
Confidence 35666666653 45778899988887777778888877643
No 91
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=31.85 E-value=1.9e+02 Score=22.97 Aligned_cols=39 Identities=5% Similarity=-0.100 Sum_probs=27.2
Q ss_pred HHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 142 WHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 142 ~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
++...++++.=.+--|+...+...+-++.+++.|..|.+
T Consensus 266 ~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~V 304 (340)
T 3gr7_A 266 VPFAELIRREADIPTGAVGLITSGWQAEEILQNGRADLV 304 (340)
T ss_dssp HHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeEE
Confidence 444555555545777888887766668888888887743
No 92
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=31.83 E-value=1e+02 Score=19.82 Aligned_cols=38 Identities=13% Similarity=0.010 Sum_probs=26.5
Q ss_pred HHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCCC
Q 029874 142 WHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFST 179 (186)
Q Consensus 142 ~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~ 179 (186)
++.+..+++.-.+.-|-+++.........+++.|..++
T Consensus 71 ~~~~~~l~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~ 108 (140)
T 3cg0_A 71 VETAARLAAGCNLPIIFITSSQDVETFQRAKRVNPFGY 108 (140)
T ss_dssp HHHHHHHHHHSCCCEEEEECCCCHHHHHHHHTTCCSEE
T ss_pred HHHHHHHHhCCCCCEEEEecCCCHHHHHHHHhcCCCEE
Confidence 44455555445678888998888777777888776664
No 93
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=31.47 E-value=29 Score=29.64 Aligned_cols=23 Identities=26% Similarity=0.144 Sum_probs=19.8
Q ss_pred chhHHHHHHHHHHhCCceEeCCC
Q 029874 23 ESNIRDLIINAIKIGYRHIDCAA 45 (186)
Q Consensus 23 ~~~~~~~l~~a~~~Gi~~~Dta~ 45 (186)
......++..|+++|++++|||.
T Consensus 93 ~~~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 93 GISSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp SSCHHHHHHHHHHHTCEEEESSC
T ss_pred cccCHHHHHHHHHcCCCEEECCC
Confidence 34567899999999999999994
No 94
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=30.98 E-value=99 Score=20.15 Aligned_cols=40 Identities=5% Similarity=-0.055 Sum_probs=28.8
Q ss_pred HHHHHHHHHH---cCCccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 141 TWHAMEDLVS---MGLVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 141 ~~~~l~~l~~---~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
.++.+..+++ ...+.-|-+++.........+++.|..++.
T Consensus 67 g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l 109 (147)
T 2zay_A 67 GMDLFNSLKKNPQTASIPVIALSGRATAKEEAQLLDMGFIDFI 109 (147)
T ss_dssp HHHHHHHHHTSTTTTTSCEEEEESSCCHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHcCcccCCCCEEEEeCCCCHHHHHHHHhCCCCEEE
Confidence 4566677775 345888899988887777777887776643
No 95
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=30.91 E-value=1e+02 Score=19.46 Aligned_cols=39 Identities=13% Similarity=0.077 Sum_probs=28.4
Q ss_pred HHHHHHHHHcC-CccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 142 WHAMEDLVSMG-LVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 142 ~~~l~~l~~~G-~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
++.+..+++.+ .+.-|-+|++........+++.|..++.
T Consensus 63 ~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l 102 (126)
T 1dbw_A 63 VELLRNLGDLKINIPSIVITGHGDVPMAVEAMKAGAVDFI 102 (126)
T ss_dssp HHHHHHHHHTTCCCCEEEEECTTCHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHhCHHHhe
Confidence 55566666653 5788899998887777888888877643
No 96
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=30.51 E-value=1.1e+02 Score=19.66 Aligned_cols=39 Identities=5% Similarity=-0.063 Sum_probs=26.7
Q ss_pred HHHHHHHHHH---cCCccEEEecCCCchhHhhHHhhccCCCC
Q 029874 141 TWHAMEDLVS---MGLVRSIGIRYVGILNPCEHSIRSSKFST 179 (186)
Q Consensus 141 ~~~~l~~l~~---~G~ir~iGvsn~~~~~l~~~~~~~~~~~~ 179 (186)
.++.++.+++ ...+.-|-+++.........+++.|..++
T Consensus 69 g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~ 110 (143)
T 3cnb_A 69 GFSICHRIKSTPATANIIVIAMTGALTDDNVSRIVALGAETC 110 (143)
T ss_dssp HHHHHHHHHTSTTTTTSEEEEEESSCCHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHhCccccCCcEEEEeCCCCHHHHHHHHhcCCcEE
Confidence 4566666666 24577888888777776777777776653
No 97
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=30.36 E-value=1.1e+02 Score=19.51 Aligned_cols=39 Identities=8% Similarity=-0.123 Sum_probs=28.5
Q ss_pred HHHHHHHHHHcC---CccEEEecCCCchhHhhHHhhccCCCC
Q 029874 141 TWHAMEDLVSMG---LVRSIGIRYVGILNPCEHSIRSSKFST 179 (186)
Q Consensus 141 ~~~~l~~l~~~G---~ir~iGvsn~~~~~l~~~~~~~~~~~~ 179 (186)
.++.++.+++.. .+.-|-+++.........+.+.|-.++
T Consensus 70 g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~ 111 (140)
T 1k68_A 70 GREVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSYDLHVNCY 111 (140)
T ss_dssp HHHHHHHHHHSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHcCcccccccEEEEecCCcHHHHHHHHHhchhhe
Confidence 466777777763 578889998887776777777776663
No 98
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=29.36 E-value=93 Score=20.53 Aligned_cols=39 Identities=5% Similarity=-0.188 Sum_probs=23.1
Q ss_pred HHHHHHHHHcC-CccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 142 WHAMEDLVSMG-LVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 142 ~~~l~~l~~~G-~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
++.+..+++.. .+.-|-+++.........+++.|-.++.
T Consensus 66 ~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l 105 (154)
T 2qsj_A 66 IDGLVRLKRFDPSNAVALISGETDHELIRAALEAGADGFI 105 (154)
T ss_dssp HHHHHHHHHHCTTSEEEEC-----CHHHHHHHHTTCCBBC
T ss_pred HHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHccCCEEE
Confidence 45556666543 5788888888777777777888776643
No 99
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=29.19 E-value=97 Score=24.17 Aligned_cols=51 Identities=18% Similarity=0.221 Sum_probs=35.3
Q ss_pred HHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCccccccc-ccHHHHHHHHHHHHH-cCCcc
Q 029874 86 LEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTT-ISLETTWHAMEDLVS-MGLVR 155 (186)
Q Consensus 86 ~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~-~G~ir 155 (186)
++.+.+.|++||+..=|.+++|..-.. +.+. ...+.++++|.+.+. +|.+-
T Consensus 17 ~~~l~~~L~~LGi~~Gd~llVHsSl~~-------------------lG~v~gg~~~vi~AL~~~vg~~GTLv 69 (268)
T 3ijw_A 17 IKTITNDLRKLGLKKGMTVIVHSSLSS-------------------IGWISGGAVAVVEALMEVITEEGTII 69 (268)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECTGG-------------------GCCBTTHHHHHHHHHHHHHCTTSEEE
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHH-------------------hCCCCCCHHHHHHHHHHHhCCCCeEE
Confidence 567888999999999999999974222 1111 124567788888775 56544
No 100
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=28.80 E-value=2.3e+02 Score=22.75 Aligned_cols=118 Identities=11% Similarity=0.035 Sum_probs=63.8
Q ss_pred CchhHHHHHHHHHHhCCceEeCCCCCCCHH---HHHHHHHHHhhcCCccccceEEEeccC-CCChhHHHHHHHHHHHHhC
Q 029874 22 DESNIRDLIINAIKIGYRHIDCAADYRNEA---EVGEALAEAFSTGLVKREDLFITTKLW-NSDHGHVLEACKDSLKKLQ 97 (186)
Q Consensus 22 ~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~---~vG~~l~~~~~~~~~~R~~~~i~tK~~-~~~~~~i~~~~~~sl~~Lg 97 (186)
+.++..+....+.+.|++.|..--.. .-. .+=+++|+. +. ++.|..+.. ..+.+...+- -+.|+.++
T Consensus 147 ~~e~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a-----~g--d~~l~vD~n~~~~~~~a~~~-~~~l~~~~ 217 (384)
T 2pgw_A 147 TAEELARDAAVGHAQGERVFYLKVGR-GEKLDLEITAAVRGE-----IG--DARLRLDANEGWSVHDAINM-CRKLEKYD 217 (384)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHHTT-----ST--TCEEEEECTTCCCHHHHHHH-HHHHGGGC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcCC-CHHHHHHHHHHHHHH-----cC--CcEEEEecCCCCCHHHHHHH-HHHHHhcC
Confidence 34556677778889999998852211 212 222444442 23 455555542 2255554443 34677777
Q ss_pred CCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCC
Q 029874 98 LDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKF 177 (186)
Q Consensus 98 ~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~ 177 (186)
++++ ..|-.. .-|+.+.++++.-.|--++--+.....-.+.+++.+..
T Consensus 218 i~~i-----EqP~~~---------------------------~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~ 265 (384)
T 2pgw_A 218 IEFI-----EQPTVS---------------------------WSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAA 265 (384)
T ss_dssp CSEE-----ECCSCT---------------------------TCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCC
T ss_pred CCEE-----eCCCCh---------------------------hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCC
Confidence 6644 444211 12566666666555555555554444447777777777
Q ss_pred CCC
Q 029874 178 STK 180 (186)
Q Consensus 178 ~~~ 180 (186)
|.+
T Consensus 266 d~v 268 (384)
T 2pgw_A 266 DMI 268 (384)
T ss_dssp SEE
T ss_pred CEE
Confidence 643
No 101
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=28.35 E-value=2.3e+02 Score=22.80 Aligned_cols=120 Identities=10% Similarity=0.035 Sum_probs=65.9
Q ss_pred CchhHHHHHHHHHHhCCceEeCCCCCCC---HHHHHHHHHHHhhcCCccccceEEEecc-CCCChhHHHHHHHHHHHHhC
Q 029874 22 DESNIRDLIINAIKIGYRHIDCAADYRN---EAEVGEALAEAFSTGLVKREDLFITTKL-WNSDHGHVLEACKDSLKKLQ 97 (186)
Q Consensus 22 ~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~---e~~vG~~l~~~~~~~~~~R~~~~i~tK~-~~~~~~~i~~~~~~sl~~Lg 97 (186)
+.++..+....+.+.|++.|..--..++ ...+=+++|+.+ | +++.|.... ...+.+...+-++. |+.++
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~av--g----~d~~l~vDan~~~~~~~a~~~~~~-l~~~~ 234 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQPDGALDIARVTAVRKHL--G----DAVPLMVDANQQWDRPTAQRMCRI-FEPFN 234 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCCSCHHHHHHHHHHHHHHH--C----TTSCEEEECTTCCCHHHHHHHHHH-HGGGC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHc--C----CCCEEEEECCCCCCHHHHHHHHHH-HHhhC
Confidence 5666677788888999998875222222 123335555542 2 233344443 22355655554433 77777
Q ss_pred CCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCC
Q 029874 98 LDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKF 177 (186)
Q Consensus 98 ~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~ 177 (186)
++++ ..|-.. +-|+.+.++++.-.|--++--+.....-.+.+++.+..
T Consensus 235 i~~i-----E~P~~~---------------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~ 282 (393)
T 2og9_A 235 LVWI-----EEPLDA---------------------------YDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAA 282 (393)
T ss_dssp CSCE-----ECCSCT---------------------------TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCC
T ss_pred CCEE-----ECCCCc---------------------------ccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCC
Confidence 6654 333211 12566666666555555554444444447777788877
Q ss_pred CCC
Q 029874 178 STK 180 (186)
Q Consensus 178 ~~~ 180 (186)
|.+
T Consensus 283 d~v 285 (393)
T 2og9_A 283 DYL 285 (393)
T ss_dssp SEE
T ss_pred CEE
Confidence 743
No 102
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=28.33 E-value=1.1e+02 Score=18.99 Aligned_cols=39 Identities=3% Similarity=-0.165 Sum_probs=28.1
Q ss_pred HHHHHHHHHcC-CccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 142 WHAMEDLVSMG-LVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 142 ~~~l~~l~~~G-~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
++.+..+++.. .+.-|-+|+.........+++.|..++.
T Consensus 60 ~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l 99 (121)
T 2pl1_A 60 LSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYV 99 (121)
T ss_dssp HHHHHHHHHTTCCSCEEEEESCCCHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHhcCCCCCEEEEecCCCHHHHHHHHHcCccceE
Confidence 55566666543 5788889988877777788888877743
No 103
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=28.30 E-value=1e+02 Score=19.13 Aligned_cols=39 Identities=10% Similarity=0.092 Sum_probs=27.8
Q ss_pred HHHHHHHHHHc-CCccEEEecCCCchhHhhHHhhccCCCC
Q 029874 141 TWHAMEDLVSM-GLVRSIGIRYVGILNPCEHSIRSSKFST 179 (186)
Q Consensus 141 ~~~~l~~l~~~-G~ir~iGvsn~~~~~l~~~~~~~~~~~~ 179 (186)
.++.++.+++. ..+.-|-+|++........+.+.|..++
T Consensus 62 g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~ 101 (120)
T 1tmy_A 62 GIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKDF 101 (120)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECTTCHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHhhCCCCeEEEEeCCCCHHHHHHHHHhCccee
Confidence 35556666654 3578888998888777777888887764
No 104
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=28.11 E-value=96 Score=21.00 Aligned_cols=40 Identities=10% Similarity=0.022 Sum_probs=28.0
Q ss_pred HHHHHHHHHHcCCccEEEecCCCchh--HhhHHhhccCCCCC
Q 029874 141 TWHAMEDLVSMGLVRSIGIRYVGILN--PCEHSIRSSKFSTK 180 (186)
Q Consensus 141 ~~~~l~~l~~~G~ir~iGvsn~~~~~--l~~~~~~~~~~~~~ 180 (186)
.++.+..+++...+.-|-++.+.... ....+++.|..++.
T Consensus 86 g~~l~~~lr~~~~~~ii~~s~~~~~~~~~~~~~~~~ga~~~l 127 (164)
T 3t8y_A 86 GIEALKLIMKKAPTRVIMVSSLTEEGAAITIEALRNGAVDFI 127 (164)
T ss_dssp HHHHHHHHHHHSCCEEEEEESSCCTTCHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHhcCCceEEEEecCCccchHHHHHHHHcCcCEEE
Confidence 46667777776668888888876643 56677888877643
No 105
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=27.78 E-value=1.3e+02 Score=19.78 Aligned_cols=64 Identities=9% Similarity=0.173 Sum_probs=41.1
Q ss_pred HHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcC-CccEEEecCCCchhHh
Q 029874 90 KDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMG-LVRSIGIRYVGILNPC 168 (186)
Q Consensus 90 ~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G-~ir~iGvsn~~~~~l~ 168 (186)
++.++.+.....|++++...-.. .+.++.+..+++.. .+.-|-+++.......
T Consensus 37 ~~a~~~l~~~~~dliild~~l~~--------------------------~~g~~~~~~l~~~~~~~pii~ls~~~~~~~~ 90 (155)
T 1qkk_A 37 TEALAGLSADFAGIVISDIRMPG--------------------------MDGLALFRKILALDPDLPMILVTGHGDIPMA 90 (155)
T ss_dssp HHHHHTCCTTCCSEEEEESCCSS--------------------------SCHHHHHHHHHHHCTTSCEEEEECGGGHHHH
T ss_pred HHHHHHHHhCCCCEEEEeCCCCC--------------------------CCHHHHHHHHHhhCCCCCEEEEECCCChHHH
Confidence 44455555567888888753211 01355566666543 5788888887777777
Q ss_pred hHHhhccCCCC
Q 029874 169 EHSIRSSKFST 179 (186)
Q Consensus 169 ~~~~~~~~~~~ 179 (186)
..++..|..++
T Consensus 91 ~~~~~~g~~~~ 101 (155)
T 1qkk_A 91 VQAIQDGAYDF 101 (155)
T ss_dssp HHHHHTTCCEE
T ss_pred HHHHhcCCCeE
Confidence 77788877664
No 106
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=27.75 E-value=99 Score=19.84 Aligned_cols=38 Identities=3% Similarity=-0.077 Sum_probs=25.9
Q ss_pred HHHHHHHHHcC-CccEEEecCCCchhHhhHHhhccCCCC
Q 029874 142 WHAMEDLVSMG-LVRSIGIRYVGILNPCEHSIRSSKFST 179 (186)
Q Consensus 142 ~~~l~~l~~~G-~ir~iGvsn~~~~~l~~~~~~~~~~~~ 179 (186)
++.+..+++.. .+.-|-+++.........+++.|-.++
T Consensus 68 ~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~ 106 (140)
T 2qr3_A 68 LFWLHEIKRQYRDLPVVLFTAYADIDLAVRGIKEGASDF 106 (140)
T ss_dssp HHHHHHHHHHCTTCCEEEEEEGGGHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHhhCcCCCEEEEECCCCHHHHHHHHHcCchhe
Confidence 45555666543 577888888777666777777776664
No 107
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=27.15 E-value=1.2e+02 Score=19.44 Aligned_cols=38 Identities=3% Similarity=-0.161 Sum_probs=27.1
Q ss_pred HHHHHHHHHcC-CccEEEecCCCchhHhhHHhhccCCCC
Q 029874 142 WHAMEDLVSMG-LVRSIGIRYVGILNPCEHSIRSSKFST 179 (186)
Q Consensus 142 ~~~l~~l~~~G-~ir~iGvsn~~~~~l~~~~~~~~~~~~ 179 (186)
++.+..+++.. .+.-|-++..........+++.|..++
T Consensus 74 ~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~ 112 (137)
T 2pln_A 74 LSFVSRIKEKHSSIVVLVSSDNPTSEEEVHAFEQGADDY 112 (137)
T ss_dssp HHHHHHHHHHSTTSEEEEEESSCCHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhcCCCccEEEEeCCCCHHHHHHHHHcCCcee
Confidence 45555555544 678888998887777788888887664
No 108
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=27.03 E-value=1.2e+02 Score=23.68 Aligned_cols=51 Identities=24% Similarity=0.217 Sum_probs=35.4
Q ss_pred HHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccc-cccHHHHHHHHHHHHH-cCCcc
Q 029874 86 LEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDT-TISLETTWHAMEDLVS-MGLVR 155 (186)
Q Consensus 86 ~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~-~G~ir 155 (186)
++.+.+.|++||+..=|.+++|..-.. +.+ ....+.++++|.+.+. +|.+-
T Consensus 15 ~~~L~~~L~~LGI~~Gd~llVHsSl~~-------------------lG~v~gg~~~vi~AL~~~vg~~GTLv 67 (273)
T 2nyg_A 15 KQSITEDLKALGLKKGMTVLVHSSLSS-------------------IGWVNGGAVAVIQALIDVVTEEGTIV 67 (273)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECSGG-------------------GCCBTTHHHHHHHHHHHHHTTTSEEE
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHH-------------------hCCCCCCHHHHHHHHHHHhCCCCeEE
Confidence 567888999999999999999974222 111 1234667888888774 56543
No 109
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=26.45 E-value=1.7e+02 Score=20.69 Aligned_cols=38 Identities=3% Similarity=-0.161 Sum_probs=27.9
Q ss_pred HHHHHHHHHcC-CccEEEecCCCchhHhhHHhhccCCCC
Q 029874 142 WHAMEDLVSMG-LVRSIGIRYVGILNPCEHSIRSSKFST 179 (186)
Q Consensus 142 ~~~l~~l~~~G-~ir~iGvsn~~~~~l~~~~~~~~~~~~ 179 (186)
++.+..+++.. .+.-|-+|.+........+++.|..++
T Consensus 56 ~~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~~ 94 (223)
T 2hqr_A 56 LSFVSRIKEKHSSIVVLVSSDNPTSEEEVHAFEQGADDY 94 (223)
T ss_dssp HHHHHHHHHHCTTSEEEEEESSCCHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCCHHHHHHHHHcCCCEE
Confidence 45555665555 688899999888877788888887664
No 110
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=26.35 E-value=1.4e+02 Score=21.40 Aligned_cols=40 Identities=8% Similarity=-0.200 Sum_probs=28.6
Q ss_pred HHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCCCCc
Q 029874 142 WHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTKF 181 (186)
Q Consensus 142 ~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~~ 181 (186)
++.+..+++...+.-|-++.+........+++.|..++..
T Consensus 64 ~~~~~~l~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~ 103 (230)
T 2oqr_A 64 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVT 103 (230)
T ss_dssp HHHHHHHHHHCSCSEEEEECCHHHHHHHHHHHHCCSCCCC
T ss_pred HHHHHHHHcCCCCCEEEEeCCCcHHHHHHHHHcCCCEEEe
Confidence 4555556655678888899887777677778888777543
No 111
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=26.32 E-value=3.2e+02 Score=23.76 Aligned_cols=39 Identities=8% Similarity=0.048 Sum_probs=28.5
Q ss_pred HHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 142 WHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 142 ~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
+.....+++.-.+--|++..+...+.++.+++++..|.+
T Consensus 283 ~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~~d~v 321 (690)
T 3k30_A 283 EEFVAGLKKLTTKPVVGVGRFTSPDAMVRQIKAGILDLI 321 (690)
T ss_dssp HHHHTTSGGGCSSCEEECSCCCCHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHCCCcceE
Confidence 445556666666778888888777778888888888743
No 112
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=25.99 E-value=1.3e+02 Score=20.02 Aligned_cols=39 Identities=10% Similarity=0.103 Sum_probs=28.4
Q ss_pred HHHHHHHHHHcC-CccEEEecCCCchhHhhHHhhccCCCC
Q 029874 141 TWHAMEDLVSMG-LVRSIGIRYVGILNPCEHSIRSSKFST 179 (186)
Q Consensus 141 ~~~~l~~l~~~G-~ir~iGvsn~~~~~l~~~~~~~~~~~~ 179 (186)
.++.+..+++.. .+.-|-+++.........+.+.|..++
T Consensus 98 g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~ 137 (157)
T 3hzh_A 98 GITCLSNIMEFDKNARVIMISALGKEQLVKDCLIKGAKTF 137 (157)
T ss_dssp HHHHHHHHHHHCTTCCEEEEESCCCHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHhhCCCCcEEEEeccCcHHHHHHHHHcCCCEE
Confidence 455666666643 577889999888887888888886664
No 113
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=25.99 E-value=1.4e+02 Score=19.53 Aligned_cols=39 Identities=8% Similarity=-0.098 Sum_probs=28.0
Q ss_pred HHHHHHHHHHcC-CccEEEecCCCchhHhhHHhhccCCCC
Q 029874 141 TWHAMEDLVSMG-LVRSIGIRYVGILNPCEHSIRSSKFST 179 (186)
Q Consensus 141 ~~~~l~~l~~~G-~ir~iGvsn~~~~~l~~~~~~~~~~~~ 179 (186)
.++.+..+++.. .+.-|-++..........+++.|..++
T Consensus 76 g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~ 115 (152)
T 3eul_A 76 GAQVAAAVRSYELPTRVLLISAHDEPAIVYQALQQGAAGF 115 (152)
T ss_dssp HHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHhcCCCCeEEEEEccCCHHHHHHHHHcCCCEE
Confidence 355666666643 477888898888877788888887664
No 114
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=25.95 E-value=1.4e+02 Score=19.55 Aligned_cols=39 Identities=5% Similarity=-0.127 Sum_probs=27.0
Q ss_pred HHHHHHHHHHcC-CccEEEecCCCchhHhhHHhhccCCCC
Q 029874 141 TWHAMEDLVSMG-LVRSIGIRYVGILNPCEHSIRSSKFST 179 (186)
Q Consensus 141 ~~~~l~~l~~~G-~ir~iGvsn~~~~~l~~~~~~~~~~~~ 179 (186)
.++.+..+++.. .+.-|-+++.........+++.|-.++
T Consensus 66 g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~ 105 (153)
T 3cz5_A 66 GIEATRHIRQWDGAARILIFTMHQGSAFALKAFEAGASGY 105 (153)
T ss_dssp HHHHHHHHHHHCTTCCEEEEESCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHCCCcEE
Confidence 355566666543 577788888877777777888777663
No 115
>2oa4_A SIR5; structure, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Silicibacter pomeroyi} SCOP: a.4.12.3
Probab=25.51 E-value=82 Score=20.79 Aligned_cols=62 Identities=16% Similarity=0.096 Sum_probs=42.0
Q ss_pred eecCCCCcCCccccccccC---CchhHHHHHHHHHHhCCceEeCCCCCC-CHHHHHHHHHHHhhcC
Q 029874 3 ITLNNGFKMPIIGLGVWRM---DESNIRDLIINAIKIGYRHIDCAADYR-NEAEVGEALAEAFSTG 64 (186)
Q Consensus 3 ~~~~tg~~v~~lglG~~~~---~~~~~~~~l~~a~~~Gi~~~Dta~~Yg-~e~~vG~~l~~~~~~~ 64 (186)
+.|..|....+.++.-..+ -...-.++|......++..-+++..|+ |+..|.+|.+.+-+.|
T Consensus 13 l~g~dG~~~~~~dlp~~~~rRWva~rK~~VV~~v~~g~lS~~EAa~ry~Is~~ei~~W~r~y~~~G 78 (101)
T 2oa4_A 13 VTLPDGSIMTRADLPPANTRRWVASRKIAVVRGVIYGLITLAEAKQTYGLSDEEFNSWVSALAEHG 78 (101)
T ss_dssp EECSSSCEEETTSSCCSCCSCCCHHHHHHHHHHHHHTTCCHHHHHHTTCSSHHHHHHHHHHHHCCC
T ss_pred ecCCCCCcchhcCCChHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHhCCCHHHHHHHHHHHHHHh
Confidence 4455566555555543222 112345577777788888999999999 8999999999875444
No 116
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=25.45 E-value=2.5e+02 Score=22.17 Aligned_cols=119 Identities=12% Similarity=0.109 Sum_probs=66.1
Q ss_pred chhHHHHHHHHHHhCCceEeCCCCCCC---HHHHHHHHHHHhhcCCccccceEEEeccC-CCChhHHHHHHHHHHHHhCC
Q 029874 23 ESNIRDLIINAIKIGYRHIDCAADYRN---EAEVGEALAEAFSTGLVKREDLFITTKLW-NSDHGHVLEACKDSLKKLQL 98 (186)
Q Consensus 23 ~~~~~~~l~~a~~~Gi~~~Dta~~Yg~---e~~vG~~l~~~~~~~~~~R~~~~i~tK~~-~~~~~~i~~~~~~sl~~Lg~ 98 (186)
.++..+....+.+.|++.|..--..++ ...+=+++++.+ | .++.|..+.- ..+.+...+-++. |+.+++
T Consensus 145 ~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~--g----~~~~l~vDan~~~~~~~a~~~~~~-l~~~~i 217 (359)
T 1mdl_A 145 VKLATERAVTAAELGFRAVKTRIGYPALDQDLAVVRSIRQAV--G----DDFGIMVDYNQSLDVPAAIKRSQA-LQQEGV 217 (359)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHHHHHHHHH--C----SSSEEEEECTTCSCHHHHHHHHHH-HHHHTC
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHh--C----CCCEEEEECCCCCCHHHHHHHHHH-HHHhCC
Confidence 345566777788999999886322223 223334445431 2 2455555542 2355555544443 777887
Q ss_pred CcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCC
Q 029874 99 DYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFS 178 (186)
Q Consensus 99 ~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~ 178 (186)
+++ ..|-.. +-|+.+.++++.-.|--++--++....-.+.+++.+..|
T Consensus 218 ~~i-----E~P~~~---------------------------~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d 265 (359)
T 1mdl_A 218 TWI-----EEPTLQ---------------------------HDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACR 265 (359)
T ss_dssp SCE-----ECCSCT---------------------------TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCS
T ss_pred CeE-----ECCCCh---------------------------hhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCC
Confidence 754 333211 126666777776556655555544444467777777777
Q ss_pred CC
Q 029874 179 TK 180 (186)
Q Consensus 179 ~~ 180 (186)
.+
T Consensus 266 ~v 267 (359)
T 1mdl_A 266 LA 267 (359)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 117
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=25.34 E-value=1.4e+02 Score=19.19 Aligned_cols=39 Identities=3% Similarity=-0.237 Sum_probs=28.4
Q ss_pred HHHHHHHHHHc---CCccEEEecCCCchhHhhHHhhccCCCC
Q 029874 141 TWHAMEDLVSM---GLVRSIGIRYVGILNPCEHSIRSSKFST 179 (186)
Q Consensus 141 ~~~~l~~l~~~---G~ir~iGvsn~~~~~l~~~~~~~~~~~~ 179 (186)
.++.+..+++. ..+.-|-+++.........+.+.|..++
T Consensus 74 g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~ 115 (143)
T 2qvg_A 74 GIEFLKELRDDSSFTDIEVFVLTAAYTSKDKLAFESLNIRGH 115 (143)
T ss_dssp HHHHHHHHTTSGGGTTCEEEEEESCCCHHHHHHHTTTTCCEE
T ss_pred HHHHHHHHHcCccccCCcEEEEeCCCCHHHHHHHHhcCCCeE
Confidence 45666777765 4688889998887777777787776664
No 118
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=25.25 E-value=70 Score=19.93 Aligned_cols=39 Identities=10% Similarity=-0.079 Sum_probs=28.3
Q ss_pred HHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 142 WHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 142 ~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
++.++.+++...+.-|-+|+.........+.+.|..++.
T Consensus 61 ~~~~~~l~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l 99 (121)
T 1zh2_A 61 IEFIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYL 99 (121)
T ss_dssp HHHHHHHHTTCCCCEEEEESCCSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHhCCCCcEEEEECCCCHHHHHHHHhcCCCeEE
Confidence 555666665567888889988877767777888777643
No 119
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=24.81 E-value=2.7e+02 Score=22.37 Aligned_cols=120 Identities=13% Similarity=0.070 Sum_probs=63.2
Q ss_pred CchhHHHHHHHHHHhCCceEeCCCCCCC-H--HHHHHHHHHHhhcCCccccceEEEeccC-CCChhHHHHHHHHHHHHhC
Q 029874 22 DESNIRDLIINAIKIGYRHIDCAADYRN-E--AEVGEALAEAFSTGLVKREDLFITTKLW-NSDHGHVLEACKDSLKKLQ 97 (186)
Q Consensus 22 ~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~-e--~~vG~~l~~~~~~~~~~R~~~~i~tK~~-~~~~~~i~~~~~~sl~~Lg 97 (186)
+.++..+....+.+.|++.|..-....+ + ..+=+++|+.+ | .++.|..+.- ..+.+...+-++. |+.++
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~--G----~d~~l~vDan~~~~~~~a~~~~~~-l~~~~ 221 (391)
T 2qgy_A 149 DTNDYLRQIEKFYGKKYGGIKIYPMLDSLSISIQFVEKVREIV--G----DELPLMLDLAVPEDLDQTKSFLKE-VSSFN 221 (391)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEECCCCSSHHHHHHHHHHHHHHH--C----SSSCEEEECCCCSCHHHHHHHHHH-HGGGC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCChHHHHHHHHHHHHHHh--C----CCCEEEEEcCCCCCHHHHHHHHHH-HHhcC
Confidence 4566677778888999998875322221 1 12333444431 2 2444544442 2355555544433 67777
Q ss_pred CCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCC
Q 029874 98 LDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKF 177 (186)
Q Consensus 98 ~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~ 177 (186)
+++ +..|-.. +-|+.+.++++.-.|--++--++....-.+.+++.+..
T Consensus 222 i~~-----iEqP~~~---------------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~ 269 (391)
T 2qgy_A 222 PYW-----IEEPVDG---------------------------ENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAA 269 (391)
T ss_dssp CSE-----EECSSCT---------------------------TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCC
T ss_pred CCe-----EeCCCCh---------------------------hhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCC
Confidence 654 3444211 12566666666545554444444444446777777777
Q ss_pred CCC
Q 029874 178 STK 180 (186)
Q Consensus 178 ~~~ 180 (186)
|.+
T Consensus 270 d~v 272 (391)
T 2qgy_A 270 DIF 272 (391)
T ss_dssp SEE
T ss_pred CEE
Confidence 643
No 120
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=24.77 E-value=2.8e+02 Score=22.46 Aligned_cols=124 Identities=13% Similarity=0.115 Sum_probs=68.6
Q ss_pred CCchhHHHHHHHHHHhCCceEeCCCCCCCHHHHHH-----------------HHHHHhhcCCccccceEEEeccCCCChh
Q 029874 21 MDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGE-----------------ALAEAFSTGLVKREDLFITTKLWNSDHG 83 (186)
Q Consensus 21 ~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~-----------------~l~~~~~~~~~~R~~~~i~tK~~~~~~~ 83 (186)
++.+....+..+|-+.|+.+|-|.-...+-..+-+ .|+..-. ..+.++++|=. .+.+
T Consensus 75 l~~e~~~~L~~~~~~~Gi~~~st~fD~~svd~l~~~~v~~~KI~S~~~~N~pLL~~va~----~gKPviLstGm--stl~ 148 (350)
T 3g8r_A 75 LQPEQMQKLVAEMKANGFKAICTPFDEESVDLIEAHGIEIIKIASCSFTDWPLLERIAR----SDKPVVASTAG--ARRE 148 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHTTCCEEEECSSSTTCHHHHHHHHT----SCSCEEEECTT--CCHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEeccCCHHHHHHHHHcCCCEEEECcccccCHHHHHHHHh----hCCcEEEECCC--CCHH
Confidence 56677778888888999999865443222111111 1222200 23445555544 3788
Q ss_pred HHHHHHHHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcC-CccEEEecCC
Q 029874 84 HVLEACKDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMG-LVRSIGIRYV 162 (186)
Q Consensus 84 ~i~~~~~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G-~ir~iGvsn~ 162 (186)
.+..+++-..+. |- ++.++|+.... + .. ... .+ +.++..|++.= -+ -||.|.|
T Consensus 149 Ei~~Ave~i~~~-g~---~viLlhC~s~Y-P---------t~-~~~--~n--------L~aI~~Lk~~fp~l-pVG~SdH 202 (350)
T 3g8r_A 149 DIDKVVSFMLHR-GK---DLTIMHCVAEY-P---------TP-DDH--LH--------LARIKTLRQQYAGV-RIGYSTH 202 (350)
T ss_dssp HHHHHHHHHHTT-TC---CEEEEECCCCS-S---------CC-GGG--CC--------TTHHHHHHHHCTTS-EEEEEEC
T ss_pred HHHHHHHHHHHc-CC---CEEEEecCCCC-C---------CC-ccc--CC--------HHHHHHHHHHCCCC-CEEcCCC
Confidence 888888877654 42 79999986543 1 00 011 11 34455555531 22 3899999
Q ss_pred Cch---hHhhHHhhccC
Q 029874 163 GIL---NPCEHSIRSSK 176 (186)
Q Consensus 163 ~~~---~l~~~~~~~~~ 176 (186)
+.. .+..+++..|.
T Consensus 203 t~g~~~~~~~AAvAlGA 219 (350)
T 3g8r_A 203 EDPDLMEPIMLAVAQGA 219 (350)
T ss_dssp CCSSCCHHHHHHHHTTC
T ss_pred CCCCccHHHHHHHHcCC
Confidence 852 23345555554
No 121
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=24.52 E-value=1.5e+02 Score=19.26 Aligned_cols=38 Identities=5% Similarity=-0.040 Sum_probs=21.1
Q ss_pred HHHHHHHHHc-CCccEEEecCCCchhHhhHHhhccCCCC
Q 029874 142 WHAMEDLVSM-GLVRSIGIRYVGILNPCEHSIRSSKFST 179 (186)
Q Consensus 142 ~~~l~~l~~~-G~ir~iGvsn~~~~~l~~~~~~~~~~~~ 179 (186)
++.+..+++. ..+.-|-+|++........+++.|..++
T Consensus 65 ~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~ 103 (141)
T 3cu5_A 65 IELVDNILKLYPDCSVIFMSGYSDKEYLKAAIKFRAIRY 103 (141)
T ss_dssp HHHHHHHHHHCTTCEEEEECCSTTTCCC------CCCEE
T ss_pred HHHHHHHHhhCCCCcEEEEeCCCcHHHHHHHHhCCccEE
Confidence 4555555553 3577888888877666677777776664
No 122
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=24.10 E-value=93 Score=20.22 Aligned_cols=38 Identities=3% Similarity=-0.091 Sum_probs=26.9
Q ss_pred HHHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCC
Q 029874 141 TWHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFS 178 (186)
Q Consensus 141 ~~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~ 178 (186)
.++.+..+++...+.-|-++..........+.+.|..+
T Consensus 66 g~~~~~~l~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~ 103 (140)
T 3h5i_A 66 GVQTALAIQQISELPVVFLTAHTEPAVVEKIRSVTAYG 103 (140)
T ss_dssp HHHHHHHHHHHCCCCEEEEESSSSCCCCGGGGGSCEEE
T ss_pred HHHHHHHHHhCCCCCEEEEECCCCHHHHHHHHhCCCcE
Confidence 35555556665788899999888776667777777555
No 123
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=23.41 E-value=3e+02 Score=22.31 Aligned_cols=35 Identities=11% Similarity=-0.002 Sum_probs=22.3
Q ss_pred HHHHHHcCCccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 145 MEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 145 l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
+.++++.=.+--|+...++ .+-++.+++.+..|.+
T Consensus 299 ~~~ir~~~~iPvi~~G~it-~~~a~~~l~~g~aD~V 333 (379)
T 3aty_A 299 VAWVRGSYSGVKISNLRYD-FEEADQQIREGKVDAV 333 (379)
T ss_dssp HHHHHTTCCSCEEEESSCC-HHHHHHHHHTTSCSEE
T ss_pred HHHHHHHCCCcEEEECCCC-HHHHHHHHHcCCCeEE
Confidence 4455555456677777774 4447777888777744
No 124
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=22.90 E-value=3e+02 Score=22.17 Aligned_cols=16 Identities=19% Similarity=0.214 Sum_probs=11.1
Q ss_pred HHHHHHHHhCCceEeC
Q 029874 28 DLIINAIKIGYRHIDC 43 (186)
Q Consensus 28 ~~l~~a~~~Gi~~~Dt 43 (186)
++-++|.++|+..++-
T Consensus 165 ~AA~~A~~aGfDgVEi 180 (361)
T 3gka_A 165 RGAENARAAGFDGVEV 180 (361)
T ss_dssp HHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHcCCCEEEE
Confidence 4445667889998874
No 125
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=22.84 E-value=27 Score=22.87 Aligned_cols=40 Identities=8% Similarity=-0.122 Sum_probs=29.7
Q ss_pred HHHHHHHHHHcC-CccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 141 TWHAMEDLVSMG-LVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 141 ~~~~l~~l~~~G-~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
.++.+..+++.+ .+.-|-+|.+........+++.|..++.
T Consensus 74 g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l 114 (135)
T 3snk_A 74 GKPGIVEARALWATVPLIAVSDELTSEQTRVLVRMNASDWL 114 (135)
T ss_dssp GSTTHHHHHGGGTTCCEEEEESCCCHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHhhCCCCcEEEEeCCCCHHHHHHHHHcCcHhhc
Confidence 355566666654 7888999998888878888888877643
No 126
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=22.74 E-value=1.5e+02 Score=18.73 Aligned_cols=37 Identities=5% Similarity=-0.153 Sum_probs=22.4
Q ss_pred HHHHHHHHHHc---CCccEEEecCCCchhHhhHHhhccCCC
Q 029874 141 TWHAMEDLVSM---GLVRSIGIRYVGILNPCEHSIRSSKFS 178 (186)
Q Consensus 141 ~~~~l~~l~~~---G~ir~iGvsn~~~~~l~~~~~~~~~~~ 178 (186)
.++.+..+++. ..+.-|-+|+...... ..+.+.|..+
T Consensus 62 g~~~~~~l~~~~~~~~~pii~~s~~~~~~~-~~~~~~g~~~ 101 (133)
T 3nhm_A 62 GYALCGHFRSEPTLKHIPVIFVSGYAPRTE-GPADQPVPDA 101 (133)
T ss_dssp HHHHHHHHHHSTTTTTCCEEEEESCCC------TTSCCCSE
T ss_pred HHHHHHHHHhCCccCCCCEEEEeCCCcHhH-HHHhhcCCce
Confidence 46667777775 3578888898776665 6667776554
No 127
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=22.46 E-value=1.5e+02 Score=18.55 Aligned_cols=39 Identities=3% Similarity=-0.044 Sum_probs=27.6
Q ss_pred HHHHHHHHH---cCCccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 142 WHAMEDLVS---MGLVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 142 ~~~l~~l~~---~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
++.+..+++ ...+.-|-+|..........+++.|..++.
T Consensus 65 ~~l~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l 106 (128)
T 1jbe_A 65 LELLKTIRAXXAMSALPVLMVTAEAKKENIIAAAQAGASGYV 106 (128)
T ss_dssp HHHHHHHHC--CCTTCCEEEEESSCCHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHhhcccCCCcEEEEecCccHHHHHHHHHhCcCcee
Confidence 555666665 235778889988877777788888877643
No 128
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=22.28 E-value=1.6e+02 Score=18.78 Aligned_cols=39 Identities=5% Similarity=-0.030 Sum_probs=27.8
Q ss_pred HHHHHHHHHHcC-CccEEEecCCCchhHhhHHhhccCCCC
Q 029874 141 TWHAMEDLVSMG-LVRSIGIRYVGILNPCEHSIRSSKFST 179 (186)
Q Consensus 141 ~~~~l~~l~~~G-~ir~iGvsn~~~~~l~~~~~~~~~~~~ 179 (186)
.++.++.+++.. .+.-|-+|++........+.+.|..++
T Consensus 64 g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~ 103 (133)
T 3b2n_A 64 GLEVLAEIRKKHLNIKVIIVTTFKRPGYFEKAVVNDVDAY 103 (133)
T ss_dssp HHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHCCCCcEEEEecCCCHHHHHHHHHcCCcEE
Confidence 355666666643 578888998887777777888877664
No 129
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=22.15 E-value=3.1e+02 Score=22.03 Aligned_cols=83 Identities=16% Similarity=0.124 Sum_probs=41.3
Q ss_pred cCCcccccccc---CCchhHHHHHHHHHHhCCceEeCCCCCCC---HHHHHHHHHHHhhcCCccccceEEEeccC-CCCh
Q 029874 10 KMPIIGLGVWR---MDESNIRDLIINAIKIGYRHIDCAADYRN---EAEVGEALAEAFSTGLVKREDLFITTKLW-NSDH 82 (186)
Q Consensus 10 ~v~~lglG~~~---~~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~---e~~vG~~l~~~~~~~~~~R~~~~i~tK~~-~~~~ 82 (186)
.+|....+.|. .+.++..+....+.+.|++.|..--..++ ...+=+++++.+ | .++.|....- ..+.
T Consensus 150 ~v~~y~~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~--g----~~~~l~vDan~~~~~ 223 (392)
T 1tzz_A 150 RVFVYAAGGYYYPGKGLSMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEEI--G----KDAQLAVDANGRFNL 223 (392)
T ss_dssp EEEEEEECCCC----CHHHHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHHH--T----TTCEEEEECTTCCCH
T ss_pred CeeEEEeCCcccCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhc--C----CCCeEEEECCCCCCH
Confidence 45554444342 24566667777888899998874322222 223334445431 2 2444544442 2355
Q ss_pred hHHHHHHHHHHHHhCCC
Q 029874 83 GHVLEACKDSLKKLQLD 99 (186)
Q Consensus 83 ~~i~~~~~~sl~~Lg~~ 99 (186)
+...+-++. |+.++++
T Consensus 224 ~~a~~~~~~-l~~~~i~ 239 (392)
T 1tzz_A 224 ETGIAYAKM-LRDYPLF 239 (392)
T ss_dssp HHHHHHHHH-HTTSCCS
T ss_pred HHHHHHHHH-HHHcCCC
Confidence 554443333 5555554
No 130
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=21.87 E-value=3.3e+02 Score=22.26 Aligned_cols=119 Identities=16% Similarity=0.162 Sum_probs=64.3
Q ss_pred CchhHHHHHHHHHHhCCceEeCCCCCCC---------HHHHHHHHHHHhhcCCccccceEEEeccC-CCChhHHHHHHHH
Q 029874 22 DESNIRDLIINAIKIGYRHIDCAADYRN---------EAEVGEALAEAFSTGLVKREDLFITTKLW-NSDHGHVLEACKD 91 (186)
Q Consensus 22 ~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~---------e~~vG~~l~~~~~~~~~~R~~~~i~tK~~-~~~~~~i~~~~~~ 91 (186)
+.++..+..+.+.+.|++.|..--.++. ....=+++|+.+ -.++-|..... ..+.+...+ +-+
T Consensus 179 ~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReav------G~d~~L~vDaN~~~~~~~Ai~-~~~ 251 (412)
T 3stp_A 179 SIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVI------GYDNDLMLECYMGWNLDYAKR-MLP 251 (412)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHH------CSSSEEEEECTTCSCHHHHHH-HHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHc------CCCCeEEEECCCCCCHHHHHH-HHH
Confidence 4566677778888999999876433321 122334455531 13444554442 224444333 234
Q ss_pred HHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcCCccEEEe-cCCCchhHhhH
Q 029874 92 SLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGI-RYVGILNPCEH 170 (186)
Q Consensus 92 sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-sn~~~~~l~~~ 170 (186)
.|+.++++ ++..|-.. +-++.+.++++.-.|.-.+- +-++..+ .+.
T Consensus 252 ~Le~~~i~-----~iEeP~~~---------------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~-~~~ 298 (412)
T 3stp_A 252 KLAPYEPR-----WLEEPVIA---------------------------DDVAGYAELNAMNIVPISGGEHEFSVIG-CAE 298 (412)
T ss_dssp HHGGGCCS-----EEECCSCT---------------------------TCHHHHHHHHHTCSSCEEECTTCCSHHH-HHH
T ss_pred HHHhcCCC-----EEECCCCc---------------------------ccHHHHHHHHhCCCCCEEeCCCCCCHHH-HHH
Confidence 55666654 44555321 12666777777655553333 3344444 777
Q ss_pred HhhccCCCCC
Q 029874 171 SIRSSKFSTK 180 (186)
Q Consensus 171 ~~~~~~~~~~ 180 (186)
+++.+..|.+
T Consensus 299 li~~~a~D~v 308 (412)
T 3stp_A 299 LINRKAVSVL 308 (412)
T ss_dssp HHHTTCCSEE
T ss_pred HHHcCCCCEE
Confidence 8888877743
No 131
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=21.57 E-value=3.1e+02 Score=21.81 Aligned_cols=71 Identities=23% Similarity=0.251 Sum_probs=36.9
Q ss_pred CchhHHHHHHHHHHhCCceEeCCCCCCCHHHHHHHHHHHhhcCCccccceEEEecc-CCCChhHHHHHHHHHHHHhCCCc
Q 029874 22 DESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKL-WNSDHGHVLEACKDSLKKLQLDY 100 (186)
Q Consensus 22 ~~~~~~~~l~~a~~~Gi~~~Dta~~Yg~e~~vG~~l~~~~~~~~~~R~~~~i~tK~-~~~~~~~i~~~~~~sl~~Lg~~~ 100 (186)
+.++..+....+.+.|++.|..--.-......=+++|+. . .++.|.... ..++.+. .+-+ +.|+.+++.+
T Consensus 148 ~~~~~~~~a~~~~~~G~~~iKik~~~~~d~~~v~avr~a------~-~~~~l~vDan~~~~~~~-~~~~-~~l~~~~i~~ 218 (375)
T 1r0m_A 148 DEQATVDLVRRHVEQGYRRIKLKIKPGWDVQPVRATREA------F-PDIRLTVDANSAYTLAD-AGRL-RQLDEYDLTY 218 (375)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEECBTTBSHHHHHHHHHH------C-TTSCEEEECTTCCCGGG-HHHH-HTTGGGCCSC
T ss_pred CHHHHHHHHHHHHHhcccEEEEecChHHHHHHHHHHHHH------c-CCCeEEEeCCCCCCHHH-HHHH-HHHHhCCCcE
Confidence 445566777788899999876421111222333666664 2 344444443 1225555 3333 3366666554
Q ss_pred c
Q 029874 101 L 101 (186)
Q Consensus 101 l 101 (186)
+
T Consensus 219 i 219 (375)
T 1r0m_A 219 I 219 (375)
T ss_dssp E
T ss_pred E
Confidence 4
No 132
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=21.57 E-value=1.1e+02 Score=19.80 Aligned_cols=38 Identities=3% Similarity=0.073 Sum_probs=24.5
Q ss_pred HHHHHHHHHH---cCCccEEEecCCCchhHhhHHhhccCCC
Q 029874 141 TWHAMEDLVS---MGLVRSIGIRYVGILNPCEHSIRSSKFS 178 (186)
Q Consensus 141 ~~~~l~~l~~---~G~ir~iGvsn~~~~~l~~~~~~~~~~~ 178 (186)
.++.+..+++ ...+.-|-+++.........+++.|-.+
T Consensus 66 g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~ 106 (142)
T 3cg4_A 66 GWDTIRAILDNSLEQGIAIVMLTAKNAPDAKMIGLQEYVVD 106 (142)
T ss_dssp HHHHHHHHHHTTCCTTEEEEEEECTTCCCCSSTTGGGGEEE
T ss_pred HHHHHHHHHhhcccCCCCEEEEECCCCHHHHHHHHhcCccE
Confidence 3566667766 2457888888877665555566665544
No 133
>1vpy_A Protein (hypothetical protein EF0366); TIM alpha/beta barrel fold, structural genomics, joint cente structural genomics, JCSG; 2.52A {Enterococcus faecalis} SCOP: c.1.32.1 PDB: 1ztv_A
Probab=21.38 E-value=2.6e+02 Score=21.78 Aligned_cols=94 Identities=18% Similarity=0.232 Sum_probs=57.5
Q ss_pred CCccccccccCCch---hHHHHHHHHHHhCCceEeC-CCCCC--CHHHHHHHHHHHhhcCCccccceEEEeccCCC----
Q 029874 11 MPIIGLGVWRMDES---NIRDLIINAIKIGYRHIDC-AADYR--NEAEVGEALAEAFSTGLVKREDLFITTKLWNS---- 80 (186)
Q Consensus 11 v~~lglG~~~~~~~---~~~~~l~~a~~~Gi~~~Dt-a~~Yg--~e~~vG~~l~~~~~~~~~~R~~~~i~tK~~~~---- 80 (186)
+-.||.++|..+.- ...+-+....+ -++.++. +..|+ +...+.++.++ ..+++..+.|++..
T Consensus 13 ~i~iG~sgWs~~~w~~~~~~~~L~~Ya~-~F~tVEiNsTFY~~p~~~t~~~W~~~-------tP~~F~F~vKa~r~iTH~ 84 (289)
T 1vpy_A 13 MIRLGLTSFSEHDYLTGKKRSTLYEYAS-HLPLVEMDTAYYGIPPKERVAEWVKA-------VPENFRFVMKVYSGISCQ 84 (289)
T ss_dssp EEEEEESTTC----------CCHHHHHH-HCSEEEECHHHHSCCCHHHHHHHHHT-------SCTTCEEEEECCTTTTTC
T ss_pred eEEEecCCCCChhhcCCChhhHHHHHHh-hCCEEEECccccCCCCHHHHHHHHHh-------CCCCcEEEEEechheecc
Confidence 34567777765321 11222333333 3666665 56787 68899999886 56889999998543
Q ss_pred -------Ch-hHHHHHHHHHHHHhC-CCcccEEEEecCCCC
Q 029874 81 -------DH-GHVLEACKDSLKKLQ-LDYLDLYLVHFPVAT 112 (186)
Q Consensus 81 -------~~-~~i~~~~~~sl~~Lg-~~~lDl~~lH~p~~~ 112 (186)
+. +.+-+.+.+.++-|. -+.+..+++-.|...
T Consensus 85 ~rl~~~~~~~~~~~~~F~~~~~pL~~~~kLG~vL~Q~Ppsf 125 (289)
T 1vpy_A 85 GEWQTYYASEEEMITAFLESMAPLIESKKLFAFLVQFSGTF 125 (289)
T ss_dssp SCGGGTCSSHHHHHHHHHHHTHHHHTTTCEEEEEEECCTTC
T ss_pred cccCCccchhHHHHHHHHHHHHhhccCCCEEEEEEEcCCCC
Confidence 11 233356667778772 278999999988554
No 134
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=21.35 E-value=1.6e+02 Score=18.60 Aligned_cols=38 Identities=3% Similarity=-0.219 Sum_probs=25.9
Q ss_pred HHHHHHHHHc-CCccEEEecCCCchhHhhHHhhccCCCC
Q 029874 142 WHAMEDLVSM-GLVRSIGIRYVGILNPCEHSIRSSKFST 179 (186)
Q Consensus 142 ~~~l~~l~~~-G~ir~iGvsn~~~~~l~~~~~~~~~~~~ 179 (186)
++.+..+++. ..+.-|-++.+........+++.|..++
T Consensus 63 ~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~ 101 (136)
T 1mvo_A 63 IEVCKQLRQQKLMFPILMLTAKDEEFDKVLGLELGADDY 101 (136)
T ss_dssp HHHHHHHHHTTCCCCEEEEECTTCCCCHHHHHHTTCCEE
T ss_pred HHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHhCCCCEE
Confidence 5556666665 4577788888777665667777777664
No 135
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=21.27 E-value=1.2e+02 Score=21.01 Aligned_cols=39 Identities=5% Similarity=0.022 Sum_probs=28.7
Q ss_pred HHHHHHHHHc-CCccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 142 WHAMEDLVSM-GLVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 142 ~~~l~~l~~~-G~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
++.+..+++. ..+.-|-+|.+........+++.|..++.
T Consensus 67 ~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~a~~~Ga~~~l 106 (184)
T 3rqi_A 67 LSLIAPLCDLQPDARILVLTGYASIATAVQAVKDGADNYL 106 (184)
T ss_dssp HHHHHHHHHHCTTCEEEEEESSCCHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHhCHHHhe
Confidence 4555555553 35788999999888888888888877744
No 136
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=21.23 E-value=1.8e+02 Score=21.21 Aligned_cols=40 Identities=8% Similarity=-0.066 Sum_probs=30.3
Q ss_pred HHHHHHHHHHcC-CccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 141 TWHAMEDLVSMG-LVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 141 ~~~~l~~l~~~G-~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
-++.+..+++.+ .+.-|-+|.++.......+++.|..++.
T Consensus 82 g~~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~yl 122 (250)
T 3r0j_A 82 GFGVLRRLRADGIDAPALFLTARDSLQDKIAGLTLGGDDYV 122 (250)
T ss_dssp HHHHHHHHHHTTCCCCEEEEECSTTHHHHHHHHTSTTCEEE
T ss_pred HHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHcCCcEEE
Confidence 467777777764 5788889988887777888888877643
No 137
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=21.03 E-value=1.7e+02 Score=18.73 Aligned_cols=39 Identities=10% Similarity=0.139 Sum_probs=27.8
Q ss_pred HHHHHHHHHHcC-CccEEEecCCCchhHhhHHhhccCCCC
Q 029874 141 TWHAMEDLVSMG-LVRSIGIRYVGILNPCEHSIRSSKFST 179 (186)
Q Consensus 141 ~~~~l~~l~~~G-~ir~iGvsn~~~~~l~~~~~~~~~~~~ 179 (186)
.++.+..+++.. .+.-|-+++.........+++.|..++
T Consensus 64 g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~ 103 (143)
T 3jte_A 64 GMDILREIKKITPHMAVIILTGHGDLDNAILAMKEGAFEY 103 (143)
T ss_dssp HHHHHHHHHHHCTTCEEEEEECTTCHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHhCccee
Confidence 355556666544 477888898888777888888887664
No 138
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=20.97 E-value=3.5e+02 Score=22.24 Aligned_cols=79 Identities=13% Similarity=0.061 Sum_probs=42.0
Q ss_pred cCCCChhHHHHHHHHHHHHhCCCcccEEEEe-cCCCCCCCCCCCCCCCCCCCCcccccccccHHHHH-HHHHHHHHcCCc
Q 029874 77 LWNSDHGHVLEACKDSLKKLQLDYLDLYLVH-FPVATKHTGVGTTDSALDADGVLEIDTTISLETTW-HAMEDLVSMGLV 154 (186)
Q Consensus 77 ~~~~~~~~i~~~~~~sl~~Lg~~~lDl~~lH-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~l~~~G~i 154 (186)
+...+.+.+.+.++.. .+|+.+++-++.+. .|..... .........+......+.+ .+.+.|.+.| .
T Consensus 214 lPget~e~~~~tl~~~-~~l~~~~i~~y~l~~~p~t~~~---------~~~~~~~~lp~~~~~~~~~~~~~~~L~~~G-y 282 (457)
T 1olt_A 214 LPKQTPESFAFTLKRV-AELNPDRLSVFNYAHLPTIFAA---------QRKIKDADLPSPQQKLDILQETIAFLTQSG-Y 282 (457)
T ss_dssp CTTCCHHHHHHHHHHH-HHHCCSEEEEEECCCCTTTSGG---------GGGSCGGGSCCHHHHHHHHHHHHHHHHHTT-C
T ss_pred CCCCCHHHHHHHHHHH-HhcCcCEEEeecCcCCcCchhH---------hhccccCCCcCHHHHHHHHHHHHHHHHHCC-C
Confidence 3344677777777665 47899988888765 3322110 0000000011111122233 3445566677 6
Q ss_pred cEEEecCCCchh
Q 029874 155 RSIGIRYVGILN 166 (186)
Q Consensus 155 r~iGvsn~~~~~ 166 (186)
..+++|||..+.
T Consensus 283 ~~yeis~fa~~~ 294 (457)
T 1olt_A 283 QFIGMDHFARPD 294 (457)
T ss_dssp EEEETTEEECTT
T ss_pred eEEEechhcCCC
Confidence 899999987543
No 139
>3gqe_A Non-structural protein 3; macro domain, X domain, venezuelan equine encephalitis virus alphavirus; HET: BCN; 2.30A {Venezuelan equine encephalitis virus} PDB: 3gqo_A*
Probab=20.97 E-value=40 Score=24.34 Aligned_cols=28 Identities=7% Similarity=0.380 Sum_probs=23.1
Q ss_pred CcCCccccccccCCchhHHHHHHHHHHh
Q 029874 9 FKMPIIGLGVWRMDESNIRDLIINAIKI 36 (186)
Q Consensus 9 ~~v~~lglG~~~~~~~~~~~~l~~a~~~ 36 (186)
+.+|.||-|.+.++.+++.+.+..+++.
T Consensus 106 IAfP~IstG~~g~p~~~aa~~i~~~l~~ 133 (168)
T 3gqe_A 106 VAIPLLSTGIFSGNKDRLTQSLNHLLTA 133 (168)
T ss_dssp EEEECTTSSTTSCSSCCHHHHHHHHHHH
T ss_pred EEECCcccCCCCCCHHHHHHHHHHHHHH
Confidence 5589999999999988888888887753
No 140
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=20.94 E-value=2.1e+02 Score=21.86 Aligned_cols=25 Identities=16% Similarity=0.238 Sum_probs=21.2
Q ss_pred chhHHHHHHHHHHhCCceEeCCCCC
Q 029874 23 ESNIRDLIINAIKIGYRHIDCAADY 47 (186)
Q Consensus 23 ~~~~~~~l~~a~~~Gi~~~Dta~~Y 47 (186)
.+++.++++.|.+.|++.|=.++++
T Consensus 19 ~~~sl~~~~~a~~~G~~~i~~T~H~ 43 (262)
T 3qy7_A 19 SADSIEMARAAVRQGIRTIIATPHH 43 (262)
T ss_dssp HHHHHHHHHHHHHTTCCEEECCCBS
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCC
Confidence 4556679999999999999888876
No 141
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=20.63 E-value=1.9e+02 Score=20.13 Aligned_cols=64 Identities=8% Similarity=0.060 Sum_probs=41.6
Q ss_pred HHHHHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHHcC-CccEEEecCCCchhHh
Q 029874 90 KDSLKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMG-LVRSIGIRYVGILNPC 168 (186)
Q Consensus 90 ~~sl~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G-~ir~iGvsn~~~~~l~ 168 (186)
++.++.+.....|++++...-.. .+-++.+..+++.. .+.-|-+|.+......
T Consensus 38 ~~al~~~~~~~~dlvl~D~~lp~--------------------------~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~ 91 (208)
T 1yio_A 38 STFLEHRRPEQHGCLVLDMRMPG--------------------------MSGIELQEQLTAISDGIPIVFITAHGDIPMT 91 (208)
T ss_dssp HHHHHHCCTTSCEEEEEESCCSS--------------------------SCHHHHHHHHHHTTCCCCEEEEESCTTSCCC
T ss_pred HHHHHhhhccCCCEEEEeCCCCC--------------------------CCHHHHHHHHHhcCCCCCEEEEeCCCCHHHH
Confidence 34445555567899988753111 11356667777653 5788899988877767
Q ss_pred hHHhhccCCCC
Q 029874 169 EHSIRSSKFST 179 (186)
Q Consensus 169 ~~~~~~~~~~~ 179 (186)
..+++.|..++
T Consensus 92 ~~a~~~Ga~~~ 102 (208)
T 1yio_A 92 VRAMKAGAIEF 102 (208)
T ss_dssp HHHHHTTEEEE
T ss_pred HHHHHCCCcEE
Confidence 77777776663
No 142
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=20.41 E-value=2.6e+02 Score=20.49 Aligned_cols=36 Identities=3% Similarity=-0.007 Sum_probs=28.9
Q ss_pred CCccccccccCCchhHHHHHHHHHHhCCceEeCCCC
Q 029874 11 MPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAAD 46 (186)
Q Consensus 11 v~~lglG~~~~~~~~~~~~l~~a~~~Gi~~~Dta~~ 46 (186)
-.++|+-++.+......+.+..+-+.|+..++....
T Consensus 17 ~~klg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~ 52 (257)
T 3lmz_A 17 PFHLGMAGYTFVNFDLDTTLKTLERLDIHYLCIKDF 52 (257)
T ss_dssp SSEEEECGGGGTTSCHHHHHHHHHHTTCCEEEECTT
T ss_pred ceEEEEEEEeecCCCHHHHHHHHHHhCCCEEEEecc
Confidence 345677777776667889999999999999998764
No 143
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=20.39 E-value=3.5e+02 Score=22.05 Aligned_cols=40 Identities=8% Similarity=-0.222 Sum_probs=29.7
Q ss_pred HHHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCCCCc
Q 029874 141 TWHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTKF 181 (186)
Q Consensus 141 ~~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~~ 181 (186)
-|+...++++.=.+--|+...++ .+.++.+++.+..|.+.
T Consensus 307 ~~~~~~~vk~~~~iPvi~~G~i~-~~~a~~~l~~g~aD~V~ 346 (402)
T 2hsa_B 307 EARLMRTLRNAYQGTFICSGGYT-RELGIEAVAQGDADLVS 346 (402)
T ss_dssp HHHHHHHHHHHCSSCEEEESSCC-HHHHHHHHHTTSCSEEE
T ss_pred hHHHHHHHHHHCCCCEEEeCCCC-HHHHHHHHHCCCCceee
Confidence 36667777776667788888884 55589999999888543
No 144
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=20.38 E-value=3.4e+02 Score=21.84 Aligned_cols=120 Identities=13% Similarity=0.064 Sum_probs=63.7
Q ss_pred CchhHHHHHHHHHHhCCceEeCC-CCCC-CH-H---HHHHHHHHHhhcCCccccceEEEecc-CCC--ChhHHHHHHHHH
Q 029874 22 DESNIRDLIINAIKIGYRHIDCA-ADYR-NE-A---EVGEALAEAFSTGLVKREDLFITTKL-WNS--DHGHVLEACKDS 92 (186)
Q Consensus 22 ~~~~~~~~l~~a~~~Gi~~~Dta-~~Yg-~e-~---~vG~~l~~~~~~~~~~R~~~~i~tK~-~~~--~~~~i~~~~~~s 92 (186)
+.++..+....+.+.|++.|..- ...| +- . .+=+++++.+ | .++.|..+. ... +.+...+-++.
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~spvG~~~~~~~~e~v~avr~a~--G----~d~~l~vDan~~~~~~~~~a~~~~~~- 217 (401)
T 2hzg_A 145 TPQETLERARAARRDGFAAVKFGWGPIGRGTVAADADQIMAAREGL--G----PDGDLMVDVGQIFGEDVEAAAARLPT- 217 (401)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEESTTTTSSCHHHHHHHHHHHHHHH--C----SSSEEEEECTTTTTTCHHHHHTTHHH-
T ss_pred CHHHHHHHHHHHHHhCCCeEEEcCCCCCCCHHHHHHHHHHHHHHHh--C----CCCeEEEECCCCCCCCHHHHHHHHHH-
Confidence 45666777788889999998752 0023 21 2 2233344431 2 245555554 223 45554444333
Q ss_pred HHHhCCCcccEEEEecCCCCCCCCCCCCCCCCCCCCcccccccccHHHHHHHHHHHHH-cCCccEEEecCCCchhHhhHH
Q 029874 93 LKKLQLDYLDLYLVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVS-MGLVRSIGIRYVGILNPCEHS 171 (186)
Q Consensus 93 l~~Lg~~~lDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~G~ir~iGvsn~~~~~l~~~~ 171 (186)
|+.+++++ +..|-.. +-|+.+.++++ .-.|--++--++....-.+.+
T Consensus 218 l~~~~i~~-----iEqP~~~---------------------------~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~ 265 (401)
T 2hzg_A 218 LDAAGVLW-----LEEPFDA---------------------------GALAAHAALAGRGARVRIAGGEAAHNFHMAQHL 265 (401)
T ss_dssp HHHTTCSE-----EECCSCT---------------------------TCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHH
T ss_pred HHhcCCCE-----EECCCCc---------------------------cCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHH
Confidence 67777664 3444211 12666677776 545555554444444447777
Q ss_pred hhccCCCCC
Q 029874 172 IRSSKFSTK 180 (186)
Q Consensus 172 ~~~~~~~~~ 180 (186)
++.+..|.+
T Consensus 266 i~~~~~d~v 274 (401)
T 2hzg_A 266 MDYGRIGFI 274 (401)
T ss_dssp HHHSCCSEE
T ss_pred HHCCCCCEE
Confidence 777777743
No 145
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=20.33 E-value=1.2e+02 Score=19.35 Aligned_cols=39 Identities=10% Similarity=-0.151 Sum_probs=25.0
Q ss_pred HHHHHHHHHHcC-CccEEEecCCCchhHhhHHhhccCCCC
Q 029874 141 TWHAMEDLVSMG-LVRSIGIRYVGILNPCEHSIRSSKFST 179 (186)
Q Consensus 141 ~~~~l~~l~~~G-~ir~iGvsn~~~~~l~~~~~~~~~~~~ 179 (186)
.++.+..+++.. .+.-|-+|+.........+.+.|-.++
T Consensus 61 g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~ 100 (134)
T 3f6c_A 61 GIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGF 100 (134)
T ss_dssp HHHHHHHHHHTTCCSEEEEEECC---CTHHHHHHTTCSEE
T ss_pred hHHHHHHHHhcCCCCeEEEEeCCCChHHHHHHHHhCCCEE
Confidence 456666666654 467788888887777777788776664
No 146
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=20.30 E-value=1.7e+02 Score=20.66 Aligned_cols=39 Identities=5% Similarity=0.078 Sum_probs=28.0
Q ss_pred HHHHHHHHHHcC-CccEEEecCCCchhHhhHHhhccCCCC
Q 029874 141 TWHAMEDLVSMG-LVRSIGIRYVGILNPCEHSIRSSKFST 179 (186)
Q Consensus 141 ~~~~l~~l~~~G-~ir~iGvsn~~~~~l~~~~~~~~~~~~ 179 (186)
.++.+..+++.+ .+.-|-+|.+........+++.|..++
T Consensus 61 g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~ 100 (225)
T 1kgs_A 61 GWEILKSMRESGVNTPVLMLTALSDVEYRVKGLNMGADDY 100 (225)
T ss_dssp HHHHHHHHHHTTCCCCEEEEESSCHHHHHHHTCCCCCSEE
T ss_pred HHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHhCCccEE
Confidence 356667777653 678888998887776777777776663
No 147
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=20.13 E-value=75 Score=20.05 Aligned_cols=39 Identities=5% Similarity=-0.061 Sum_probs=26.8
Q ss_pred HHHHHHHHHHc---CCccEEEecCCCchhHhhHHhhccCCCC
Q 029874 141 TWHAMEDLVSM---GLVRSIGIRYVGILNPCEHSIRSSKFST 179 (186)
Q Consensus 141 ~~~~l~~l~~~---G~ir~iGvsn~~~~~l~~~~~~~~~~~~ 179 (186)
.++.+..+++. ..+.-|-+|.+........+++.|..++
T Consensus 61 g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~ 102 (127)
T 2jba_A 61 GIQFIKHLRRESMTRDIPVVMLTARGEEEDRVRGLETGADDC 102 (127)
T ss_dssp HHHHHHHHHTSTTTTTSCEEEEEETTHHHHHHTTCCCSCSEE
T ss_pred HHHHHHHHHhCcccCCCCEEEEeCCCCHHHHHHHHhcCCCeE
Confidence 35666777765 3678888888777666666677776654
No 148
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=20.12 E-value=1.9e+02 Score=18.89 Aligned_cols=34 Identities=6% Similarity=-0.080 Sum_probs=23.5
Q ss_pred HHHHHHHHHcC-CccEEEecCCCchhHhhHHhhcc
Q 029874 142 WHAMEDLVSMG-LVRSIGIRYVGILNPCEHSIRSS 175 (186)
Q Consensus 142 ~~~l~~l~~~G-~ir~iGvsn~~~~~l~~~~~~~~ 175 (186)
++.+..+++.. .+.-|-+++.........++..|
T Consensus 67 ~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g 101 (154)
T 2rjn_A 67 EVFLEQVAKSYPDIERVVISGYADAQATIDAVNRG 101 (154)
T ss_dssp HHHHHHHHHHCTTSEEEEEECGGGHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCcEEEEecCCCHHHHHHHHhcc
Confidence 45556666543 57788888877766677777776
No 149
>1y60_A Formaldehyde-activating enzyme FAE; pentamer, beta-alpha-beta LEFT handed crossover, tetrahydromethanopterin-binding, lyase; HET: H4M; 1.90A {Methylobacterium extorquens} SCOP: d.14.1.12 PDB: 1y5y_A*
Probab=20.10 E-value=1.7e+02 Score=21.17 Aligned_cols=32 Identities=19% Similarity=0.447 Sum_probs=26.4
Q ss_pred CHHHHHHHHHHHhhcCCcccc---ceEEEeccCCC
Q 029874 49 NEAEVGEALAEAFSTGLVKRE---DLFITTKLWNS 80 (186)
Q Consensus 49 ~e~~vG~~l~~~~~~~~~~R~---~~~i~tK~~~~ 80 (186)
.+..+++++.+.++.|.++++ +++|..-+|..
T Consensus 86 aQ~avA~AVaD~V~eG~iP~~~a~dl~Iiv~Vfi~ 120 (169)
T 1y60_A 86 AQHGVAMAVQDAVAEGIIPADEADDLYVLVGVFIH 120 (169)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTTGGGEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHcCCCChhhcCcEEEEEEeecC
Confidence 588999999999999988875 58888888754
No 150
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=20.06 E-value=4.3e+02 Score=22.86 Aligned_cols=39 Identities=3% Similarity=-0.097 Sum_probs=27.6
Q ss_pred HHHHHHHHHcCCccEEEecCCCchhHhhHHhhccCCCCC
Q 029874 142 WHAMEDLVSMGLVRSIGIRYVGILNPCEHSIRSSKFSTK 180 (186)
Q Consensus 142 ~~~l~~l~~~G~ir~iGvsn~~~~~l~~~~~~~~~~~~~ 180 (186)
++.+.++++.=.+--|++..+...+.++.+++.|..|.+
T Consensus 269 ~~~~~~i~~~~~iPvi~~Ggi~~~~~a~~~l~~g~aD~V 307 (671)
T 1ps9_A 269 SWVTRKLKGHVSLPLVTTNRINDPQVADDILSRGDADMV 307 (671)
T ss_dssp HHHHHHHTTSCSSCEEECSSCCSHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHhcCceEEEeCCCCCHHHHHHHHHcCCCCEE
Confidence 455666666656777888887666668888888887744
Done!