Your job contains 1 sequence.
>029878
MLSMSFHCHINAVLTPDTSSATAKWPSQNLPLKPFTKTSVMLRPQISYLKLRHGTRQVRV
KHSSSSAAIDQTLDPEPPADDSDCDIILRKEKLGVVVKPNEKRRLVLKFIWMQNDIGIAL
DQVIPGHGTIPLSPYYFWPRKDAWEELKVLLDSKPWISQTERIHLLNQATDVINFWQTSG
GNLQQG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029878
(186 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2143211 - symbol:PSRP3/2 "plastid-specifi... 419 2.9e-39 1
TAIR|locus:2026940 - symbol:PSRP3/1 "plastid-specifi... 382 2.4e-35 1
>TAIR|locus:2143211 [details] [associations]
symbol:PSRP3/2 "plastid-specific ribosomal protein
3/2" species:3702 "Arabidopsis thaliana" [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009536 "plastid" evidence=IEA]
InterPro:IPR006924 Pfam:PF04839 ProDom:PD015453 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AL391144 eggNOG:NOG28579 HOGENOM:HOG000240847
ProtClustDB:CLSN2687486 EMBL:AK117858 EMBL:BT003711 IPI:IPI00538512
PIR:T51405 RefSeq:NP_197080.1 UniGene:At.66680
ProteinModelPortal:Q9LFV0 SMR:Q9LFV0 STRING:Q9LFV0 PaxDb:Q9LFV0
PRIDE:Q9LFV0 EnsemblPlants:AT5G15760.1 GeneID:831432
KEGG:ath:AT5G15760 TAIR:At5g15760 InParanoid:Q9LFV0 OMA:WISELHR
PhylomeDB:Q9LFV0 Genevestigator:Q9LFV0 GermOnline:AT5G15760
Uniprot:Q9LFV0
Length = 183
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 90/170 (52%), Positives = 110/170 (64%)
Query: 26 PSQNLPLKPF------TKTSVMLRPQISYLKLRHGTRQVRVKHSSSSAAI------DQTL 73
PSQ L KP TK RP +S G Q+ +HS + I + T
Sbjct: 18 PSQKLSSKPIAHISLSTKLKPSSRPSLSCSTWNQG--QIPARHSCINPGIFAYPPSNLTF 75
Query: 74 DPEPPADDSDCDIILRKEKLGVVVKPNEKRRLVLKFIWMQNDIGIALDQVIPGHGTIPLS 133
E P +S L K+K+ V+VKP EK ++VLKF+WMQ DIG+ALD +IPG GTIPLS
Sbjct: 76 SHELPESESPP---LGKKKMRVLVKPLEKPKVVLKFVWMQKDIGVALDHMIPGFGTIPLS 132
Query: 134 PYYFWPRKDAWEELKVLLDSKPWISQTERIHLLNQATDVINFWQTSGGNL 183
PYYFWPRKDAWEELK LL+SKPWIS+ R+ LLNQATD+IN WQ+SGG+L
Sbjct: 133 PYYFWPRKDAWEELKTLLESKPWISELHRVFLLNQATDIINLWQSSGGDL 182
>TAIR|locus:2026940 [details] [associations]
symbol:PSRP3/1 "plastid-specific ribosomal protein
3/1" species:3702 "Arabidopsis thaliana" [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0032544 "plastid
translation" evidence=IMP] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=RCA]
InterPro:IPR006924 Pfam:PF04839 ProDom:PD015453 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 GO:GO:0005840 GO:GO:0003735
EMBL:AC008075 GO:GO:0009535 UniGene:At.35504 GO:GO:0032544
EMBL:BT003990 EMBL:BT005090 EMBL:AY086145 IPI:IPI00543358
PIR:C96710 RefSeq:NP_564934.1 UniGene:At.71121
ProteinModelPortal:Q9SX22 SMR:Q9SX22 IntAct:Q9SX22 STRING:Q9SX22
PaxDb:Q9SX22 PRIDE:Q9SX22 ProMEX:Q9SX22 EnsemblPlants:AT1G68590.1
GeneID:843189 KEGG:ath:AT1G68590 TAIR:At1g68590 eggNOG:NOG28579
HOGENOM:HOG000240847 InParanoid:Q9SX22 OMA:LEAKPWI PhylomeDB:Q9SX22
ProtClustDB:CLSN2687486 Genevestigator:Q9SX22 GermOnline:AT1G68590
Uniprot:Q9SX22
Length = 166
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 76/147 (51%), Positives = 98/147 (66%)
Query: 37 KTSVMLRPQISYLKLRHGTRQVRVKHSSSSAAIDQTLDPEPPADDSDCDIILRKEKLGVV 96
K S+ P + + + T+ + VK + A +TL E D ++ V
Sbjct: 22 KLSITASPPLFHTQT---TKPISVKRKIITLAAPETLTAETVTGIDTSDNT--PQQTIKV 76
Query: 97 VKPNEKRRLVLKFIWMQNDIGIALDQVIPGHGTIPLSPYYFWPRKDAWEELKVLLDSKPW 156
VKP+EK R+VLKF+WM+ +IG+ LDQ +PGHGTIPLSPY+FWPRKDAWEELK L++KPW
Sbjct: 77 VKPDEKSRVVLKFVWMEKNIGLGLDQHVPGHGTIPLSPYFFWPRKDAWEELKSTLEAKPW 136
Query: 157 ISQTERIHLLNQATDVINFWQTSGGNL 183
ISQ + I LLNQATD+IN WQ SGGNL
Sbjct: 137 ISQKKMIILLNQATDIINLWQQSGGNL 163
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 186 186 0.00083 110 3 11 22 0.45 32
31 0.41 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 617 (66 KB)
Total size of DFA: 181 KB (2103 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.68u 0.14s 18.82t Elapsed: 00:00:01
Total cpu time: 18.68u 0.14s 18.82t Elapsed: 00:00:01
Start: Tue May 21 01:17:52 2013 End: Tue May 21 01:17:53 2013