Query 029878
Match_columns 186
No_of_seqs 79 out of 81
Neff 2.7
Searched_HMMs 13730
Date Mon Mar 25 07:43:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029878.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/029878hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1nkpa_ a.38.1.1 (A:) Myc prot 54.2 4.2 0.00031 26.7 2.8 40 141-180 22-61 (88)
2 d1dlca3 f.1.3.1 (A:61-289) del 49.8 2.3 0.00017 32.6 0.9 44 136-179 38-93 (229)
3 d1wzda1 a.132.1.1 (A:7-213) He 40.2 22 0.0016 25.5 5.1 45 133-178 152-200 (207)
4 d2o3la1 a.69.4.1 (A:14-95) Hyp 37.0 17 0.0012 24.4 3.7 42 142-183 18-59 (82)
5 d1nkpb_ a.38.1.1 (B:) Max prot 33.0 12 0.00087 24.1 2.3 38 141-179 18-55 (83)
6 d1nlwa_ a.38.1.1 (A:) Mad prot 32.7 15 0.0011 23.4 2.7 38 142-179 18-55 (79)
7 d2o4ta1 a.69.4.1 (A:16-105) Un 31.3 26 0.0019 23.7 4.0 42 142-183 14-55 (90)
8 d1mdya_ a.38.1.1 (A:) Myod B/H 28.0 23 0.0017 22.3 3.0 38 141-179 28-65 (68)
9 d1fyva_ c.23.2.1 (A:) Toll-lik 24.6 16 0.0012 25.5 1.9 22 133-154 129-155 (161)
10 d1an4a_ a.38.1.1 (A:) Usf B/HL 20.0 19 0.0014 22.3 1.4 39 142-180 22-63 (65)
No 1
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.24 E-value=4.2 Score=26.70 Aligned_cols=40 Identities=18% Similarity=0.133 Sum_probs=29.1
Q ss_pred CchHHHHHhhhcCCCCCChhhHHHHhhhhHHHHHHHHhcC
Q 029878 141 KDAWEELKVLLDSKPWISQTERIHLLNQATDVINFWQTSG 180 (186)
Q Consensus 141 ~DAWEeLK~eLEsK~WIs~~e~i~lLNq~TeIINyWQe~~ 180 (186)
+|+.++|+..|-.-+==....+..||+.|.+-|++.|+..
T Consensus 22 n~~f~~Lr~llP~~~~~~k~sK~~iL~~A~~yI~~L~~~~ 61 (88)
T d1nkpa_ 22 KRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEE 61 (88)
T ss_dssp HHHHHHHHTTCGGGTTCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 4678889988743211123569999999999999998753
No 2
>d1dlca3 f.1.3.1 (A:61-289) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis tenebrionis, CRYIIIA (BT13) [TaxId: 1444]}
Probab=49.85 E-value=2.3 Score=32.62 Aligned_cols=44 Identities=16% Similarity=0.481 Sum_probs=27.9
Q ss_pred ccccCCchHHHHHhhhcCC--CCCChhhHHHH----------hhhhHHHHHHHHhc
Q 029878 136 YFWPRKDAWEELKVLLDSK--PWISQTERIHL----------LNQATDVINFWQTS 179 (186)
Q Consensus 136 fFWPr~DAWEeLK~eLEsK--~WIs~~e~i~l----------LNq~TeIINyWQe~ 179 (186)
+|||.+|-|+++....|.- .=|++..+-.+ ++.+.+.++-|++.
T Consensus 38 ~lwP~~~~w~~~~~~ve~lId~~i~~~~~~~~~~~l~gL~~~l~~Y~~al~~w~~n 93 (229)
T d1dlca3 38 TIWPSEDPWKAFMEQVEALMDQKIADYAKNKALAELQGLQNNVEDYVSALSSWQKN 93 (229)
T ss_dssp HTSSSHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4699999999999888752 22455544333 34445556667664
No 3
>d1wzda1 a.132.1.1 (A:7-213) Heme oxygenase HmuO {Corynebacterium diphtheriae [TaxId: 1717]}
Probab=40.24 E-value=22 Score=25.52 Aligned_cols=45 Identities=27% Similarity=0.384 Sum_probs=35.1
Q ss_pred cccccccCCc----hHHHHHhhhcCCCCCChhhHHHHhhhhHHHHHHHHh
Q 029878 133 SPYYFWPRKD----AWEELKVLLDSKPWISQTERIHLLNQATDVINFWQT 178 (186)
Q Consensus 133 T~YfFWPr~D----AWEeLK~eLEsK~WIs~~e~i~lLNq~TeIINyWQe 178 (186)
+.||+++..+ -|+.+|..|+.-. +++.++-.++..+..+..+..+
T Consensus 152 ~~fy~f~~~~~~~~~k~~~r~~l~~~~-~~~~~~~~ii~eA~~aF~~~~~ 200 (207)
T d1wzda1 152 LGFYHFEGIAKLKVYKDEYREKLNNLE-LSDEQREHLLKEATDAFVFNHQ 200 (207)
T ss_dssp CGGGCCTTCSCHHHHHHHHHHHHHTCC-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCcCCHHHHHHHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHHH
Confidence 3577777643 2899999999876 6788999999999988876543
No 4
>d2o3la1 a.69.4.1 (A:14-95) Hypothetical protein BCE3448 {Bacillus cereus [TaxId: 1396]}
Probab=37.04 E-value=17 Score=24.37 Aligned_cols=42 Identities=7% Similarity=0.088 Sum_probs=35.2
Q ss_pred chHHHHHhhhcCCCCCChhhHHHHhhhhHHHHHHHHhcCCCC
Q 029878 142 DAWEELKVLLDSKPWISQTERIHLLNQATDVINFWQTSGGNL 183 (186)
Q Consensus 142 DAWEeLK~eLEsK~WIs~~e~i~lLNq~TeIINyWQe~~~~l 183 (186)
-+|++|+.+|=...=+++.+...||+.+.+.+--.|..|++.
T Consensus 18 ~~y~~i~~YL~~~~~~~~~~~~~il~dil~l~eea~~~G~~v 59 (82)
T d2o3la1 18 FVFKKIQNYMWNFSAGNGMDMLHIQYELIDLFEAGAAEGRQV 59 (82)
T ss_dssp HHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHTCCH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 489999999955555689999999999999999888888653
No 5
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.00 E-value=12 Score=24.07 Aligned_cols=38 Identities=24% Similarity=0.406 Sum_probs=29.0
Q ss_pred CchHHHHHhhhcCCCCCChhhHHHHhhhhHHHHHHHHhc
Q 029878 141 KDAWEELKVLLDSKPWISQTERIHLLNQATDVINFWQTS 179 (186)
Q Consensus 141 ~DAWEeLK~eLEsK~WIs~~e~i~lLNq~TeIINyWQe~ 179 (186)
++++++|+..|.+-+ -...+++.||..|.+.|.+.|+.
T Consensus 18 n~~f~~L~~llP~~~-~~k~sK~~iL~~A~~yI~~L~~~ 55 (83)
T d1nkpb_ 18 KDSFHSLRDSVPSLQ-GEKASRAQILDKATEYIQYMRRK 55 (83)
T ss_dssp HHHHHHHHTTSGGGT-TSCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCC-CCCCCHHHHHHHHHHHHHHHHHH
Confidence 467889999886422 12458999999999999988764
No 6
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.73 E-value=15 Score=23.42 Aligned_cols=38 Identities=29% Similarity=0.217 Sum_probs=27.5
Q ss_pred chHHHHHhhhcCCCCCChhhHHHHhhhhHHHHHHHHhc
Q 029878 142 DAWEELKVLLDSKPWISQTERIHLLNQATDVINFWQTS 179 (186)
Q Consensus 142 DAWEeLK~eLEsK~WIs~~e~i~lLNq~TeIINyWQe~ 179 (186)
++-++|+..|-.-+=-....+..||+.|++-|.+=|+.
T Consensus 18 ~~f~~L~~llP~~~~~~k~sK~~iL~~A~~yI~~L~~~ 55 (79)
T d1nlwa_ 18 LSLEKLKGLVPLGPDSSRHTTLSLLTKAKLHIKKLEDS 55 (79)
T ss_dssp HHHHHHHHSSCCCSSSCCCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCccCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 56677888874322223457899999999999987764
No 7
>d2o4ta1 a.69.4.1 (A:16-105) Uncharacterized protein BH3976 {Bacillus halodurans [TaxId: 86665]}
Probab=31.26 E-value=26 Score=23.68 Aligned_cols=42 Identities=17% Similarity=0.148 Sum_probs=35.1
Q ss_pred chHHHHHhhhcCCCCCChhhHHHHhhhhHHHHHHHHhcCCCC
Q 029878 142 DAWEELKVLLDSKPWISQTERIHLLNQATDVINFWQTSGGNL 183 (186)
Q Consensus 142 DAWEeLK~eLEsK~WIs~~e~i~lLNq~TeIINyWQe~~~~l 183 (186)
-+|++|+.+|-...=++..+...||+.+.+.+--.|..|++.
T Consensus 14 ~~y~~i~~YL~~~~~~~~~~~~~il~dil~lleea~~~G~~v 55 (90)
T d2o4ta1 14 IVYKEIQKYLFKVGPVELNEGIGLLSEILGFFEEGAAAGKGV 55 (90)
T ss_dssp HHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 479999999955544489999999999999999999888653
No 8
>d1mdya_ a.38.1.1 (A:) Myod B/HLH domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.04 E-value=23 Score=22.29 Aligned_cols=38 Identities=26% Similarity=0.331 Sum_probs=29.2
Q ss_pred CchHHHHHhhhcCCCCCChhhHHHHhhhhHHHHHHHHhc
Q 029878 141 KDAWEELKVLLDSKPWISQTERIHLLNQATDVINFWQTS 179 (186)
Q Consensus 141 ~DAWEeLK~eLEsK~WIs~~e~i~lLNq~TeIINyWQe~ 179 (186)
+++.++|+..|-+-+ ...-+++.+|..|.+-|.+=|+.
T Consensus 28 n~~~~~L~~llP~~~-~~k~sK~~iL~~Ai~YI~~Lq~~ 65 (68)
T d1mdya_ 28 NEAFETLKRSTSSNP-NQRLPKVEILRNAIRYIEGLQAL 65 (68)
T ss_dssp HHHHHHHHTTSCSCT-TSCCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCC-CCCCCHHHHHHHHHHHHHHHHHH
Confidence 467889998886543 23448999999999999887763
No 9
>d1fyva_ c.23.2.1 (A:) Toll-like receptor 1, TLR1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.64 E-value=16 Score=25.53 Aligned_cols=22 Identities=27% Similarity=0.881 Sum_probs=17.6
Q ss_pred cccccccCCch-----HHHHHhhhcCC
Q 029878 133 SPYYFWPRKDA-----WEELKVLLDSK 154 (186)
Q Consensus 133 T~YfFWPr~DA-----WEeLK~eLEsK 154 (186)
-+|.-||+.+. |++|+..|..|
T Consensus 129 ~~~l~W~~~~~~~~~FW~~L~~aL~~~ 155 (161)
T d1fyva_ 129 RTYLEWPKEKSKRGLFWANLRAAINIK 155 (161)
T ss_dssp CCCEECCSSGGGSSHHHHHHHHHHHSC
T ss_pred CCeEeCCCCcchhHHHHHHHHHHCCCC
Confidence 35889998765 99999998765
No 10
>d1an4a_ a.38.1.1 (A:) Usf B/HLH domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.01 E-value=19 Score=22.27 Aligned_cols=39 Identities=18% Similarity=0.159 Sum_probs=26.9
Q ss_pred chHHHHHhhhcCC---CCCChhhHHHHhhhhHHHHHHHHhcC
Q 029878 142 DAWEELKVLLDSK---PWISQTERIHLLNQATDVINFWQTSG 180 (186)
Q Consensus 142 DAWEeLK~eLEsK---~WIs~~e~i~lLNq~TeIINyWQe~~ 180 (186)
++-++|+..|-.- .==...++..||+.+++-|.+=|++.
T Consensus 22 ~~f~~L~~lvP~~~~~~~~~k~sK~~iL~~av~yI~~Lq~~~ 63 (65)
T d1an4a_ 22 NWIVQLSKIIPDSSMESTKSGQSKGGILSKASDYIQELRQSN 63 (65)
T ss_dssp HHHHHHHHHSCCCCCCSSTTCCCTTTTTTTTHHHHHHHHTTT
T ss_pred HHHHHHHHHcccccccCCCCCCCHHHHHHHHHHHHHHHHHhh
Confidence 5667788777321 00124467889999999999988765
Done!