BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>029879
MNAFTFYFQCGAVPVFLYAAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERP
NEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARGGGLPTVQTLGLV
HGEDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPEMIVEKYMNLIN
ATANAD

High Scoring Gene Products

Symbol, full name Information P value
AT2G20830 protein from Arabidopsis thaliana 3.8e-46
zgc:153901 gene_product from Danio rerio 0.00056

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029879
        (186 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2051415 - symbol:AT2G20830 species:3702 "Arabi...   484  3.8e-46   1
ZFIN|ZDB-GENE-060929-820 - symbol:zgc:153901 "zgc:153901"...   108  0.00056   1


>TAIR|locus:2051415 [details] [associations]
            symbol:AT2G20830 species:3702 "Arabidopsis thaliana"
            [GO:0005542 "folic acid binding" evidence=IEA] [GO:0008152
            "metabolic process" evidence=IEA] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0016740 "transferase activity" evidence=IEA]
            InterPro:IPR012886 InterPro:IPR022384 Pfam:PF07837 EMBL:CP002685
            GO:GO:0016740 GO:GO:0005542 Gene3D:3.30.990.10 SUPFAM:SSF55116
            IPI:IPI00539549 RefSeq:NP_973497.1 UniGene:At.13652
            ProteinModelPortal:F4IFK0 SMR:F4IFK0 PRIDE:F4IFK0 DNASU:816615
            EnsemblPlants:AT2G20830.2 GeneID:816615 KEGG:ath:AT2G20830
            OMA:PTFLYGA PhylomeDB:F4IFK0 Uniprot:F4IFK0
        Length = 431

 Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
 Identities = 90/168 (53%), Positives = 122/168 (72%)

Query:    13 VPVFLYAAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPNEGPIQVSPARG 72
             VP +LY AA      LD+IRR+LGY++ N  G++WAG    E++P +P+ GP +VS A+G
Sbjct:   262 VPTYLYGAAEKEQCTLDSIRRKLGYFKANREGHEWAGGFDLEMVPLKPDAGPQEVSKAKG 321

Query:    73 IAMIGARPWVALYNIPIMSTDVAATRRIARMVSARGGGLPTVQTLGLVHGEDSTEIACML 132
             +  +GA  WV+ YN+P+MS D+ A RRIAR  S RGGGL +VQT+ LVHGE   E+AC L
Sbjct:   322 VVAVGACGWVSNYNVPVMSNDLKAVRRIARKTSERGGGLASVQTMALVHGEGVIEVACNL 381

Query:   133 LEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPEMIVEKYMNLIN 180
             L P+QVG D VQ  +E+L  EEGL V KGY+TD++P+ IVE+YM+L+N
Sbjct:   382 LNPSQVGGDEVQGLIERLGREEGLLVGKGYYTDYTPDQIVERYMDLLN 429


>ZFIN|ZDB-GENE-060929-820 [details] [associations]
            symbol:zgc:153901 "zgc:153901" species:7955 "Danio
            rerio" [GO:0016740 "transferase activity" evidence=IEA] [GO:0008152
            "metabolic process" evidence=IEA] [GO:0005542 "folic acid binding"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            InterPro:IPR012886 InterPro:IPR022384 Pfam:PF07837
            ZFIN:ZDB-GENE-060929-820 GO:GO:0016740 GO:GO:0005542
            Gene3D:3.30.990.10 SUPFAM:SSF55116 eggNOG:COG3643 EMBL:BC124487
            IPI:IPI00805878 RefSeq:NP_001070113.1 UniGene:Dr.81603
            ProteinModelPortal:Q08BZ7 STRING:Q08BZ7 GeneID:767707
            KEGG:dre:767707 HOGENOM:HOG000007037 HOVERGEN:HBG082476
            InParanoid:Q08BZ7 OrthoDB:EOG444KKX NextBio:20918095 Uniprot:Q08BZ7
        Length = 328

 Score = 108 (43.1 bits), Expect = 0.00056, P = 0.00056
 Identities = 38/130 (29%), Positives = 61/130 (46%)

Query:     3 AFTFYFQCGAVPVFLYA-AAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPN 61
             A T   +      FL+  A  P  + L   R+E+G++R            +  +   +P+
Sbjct:   125 ALTLAERVAGTSAFLFGWADSPQHRGLAQRRKEIGWFRK-----------VLNVSNIKPD 173

Query:    62 EGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMV-SARGGGLPTVQTLGLV 120
              G  Q +   GI  +GA P+V   N+ I + D+A  R +A  +  +  GG+P VQ + L 
Sbjct:   174 IGS-QPTRRYGITGVGASPYVMNCNVTIDTQDLALGRSVASAIRESSPGGIPGVQVMALP 232

Query:   121 HGEDSTEIAC 130
             H E + EIAC
Sbjct:   233 H-EGAVEIAC 241


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.136   0.414    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      186       186   0.00083  110 3  11 22  0.44    32
                                                     31  0.41    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  597 (63 KB)
  Total size of DFA:  160 KB (2095 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.46u 0.11s 17.57t   Elapsed:  00:00:01
  Total cpu time:  17.46u 0.11s 17.57t   Elapsed:  00:00:01
  Start:  Tue May 21 01:18:17 2013   End:  Tue May 21 01:18:18 2013

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