BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>029880
MAALPTDTLQSVRVRSLCFTHSQIPKLTSGVLPISSPKPRTPTISSSKSRNNAISRPRLL
VRASATEFPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELAS
ALKESKARFDSAGVKLIAVGVGTPNKAQILAERVGNVFITQVLSLPLEVTPSLFKFHVTY
VKYVNC

High Scoring Gene Products

Symbol, full name Information P value
AT5G65840 protein from Arabidopsis thaliana 5.8e-34
AT2G37240 protein from Arabidopsis thaliana 3.7e-08
FAM213B
Prostamide/prostaglandin F synthase
protein from Homo sapiens 0.00083

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029880
        (186 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2152054 - symbol:AT5G65840 species:3702 "Arabi...   369  5.8e-34   1
TAIR|locus:2049801 - symbol:AT2G37240 species:3702 "Arabi...   134  3.7e-08   1
UNIPROTKB|J3KQD0 - symbol:FAM213B "Prostamide/prostagland...   104  0.00083   1


>TAIR|locus:2152054 [details] [associations]
            symbol:AT5G65840 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016209
            "antioxidant activity" evidence=IEA] [GO:0016491 "oxidoreductase
            activity" evidence=IEA] [GO:0055114 "oxidation-reduction process"
            evidence=IEA] [GO:0009570 "chloroplast stroma" evidence=IDA]
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009570
            Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833 EMBL:AY099841
            EMBL:BT000333 IPI:IPI00516513 RefSeq:NP_201385.2 UniGene:At.43518
            ProteinModelPortal:Q8L5Y8 STRING:Q8L5Y8 PaxDb:Q8L5Y8 PRIDE:Q8L5Y8
            EnsemblPlants:AT5G65840.1 GeneID:836713 KEGG:ath:AT5G65840
            TAIR:At5g65840 eggNOG:NOG304152 HOGENOM:HOG000240386
            InParanoid:Q8L5Y8 OMA:KNYTIEA PhylomeDB:Q8L5Y8
            ProtClustDB:CLSN2690266 ArrayExpress:Q8L5Y8 Genevestigator:Q8L5Y8
            Uniprot:Q8L5Y8
        Length = 275

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 79/137 (57%), Positives = 100/137 (72%)

Query:    22 SQIPKLTSGVLPISSPKPRTPTISSSKSRNNAISRPRLLVRASATE----FPANVGDLLG 77
             SQ+P   S    I+S  P T   SS  S  + ISRPR++   +ATE    +  ++G++LG
Sbjct:    37 SQLPSNFSS--SIASV-PVTKLKSSYSSSVSPISRPRVVSARAATESFTDYREDIGEILG 93

Query:    78 DFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLI 137
             D SIFTA+G+ V F DLWDQ +G+A V LLRHFGC CCWELA+ALKE+K RFD+AGVKLI
Sbjct:    94 DVSIFTASGQRVQFSDLWDQKDGIAAVVLLRHFGCVCCWELATALKEAKPRFDAAGVKLI 153

Query:   138 AVGVGTPNKAQILAERV 154
             AVGVGTP+KA+ILA R+
Sbjct:   154 AVGVGTPDKARILATRL 170


>TAIR|locus:2049801 [details] [associations]
            symbol:AT2G37240 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0016209
            "antioxidant activity" evidence=IEA] [GO:0016491 "oxidoreductase
            activity" evidence=IEA] [GO:0055114 "oxidation-reduction process"
            evidence=IEA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0010264
            "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA]
            GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC005896
            EMBL:AY050345 EMBL:BT006337 EMBL:AY088891 IPI:IPI00532251
            PIR:C84790 RefSeq:NP_030274.1 UniGene:At.13314
            ProteinModelPortal:Q9ZUU2 STRING:Q9ZUU2 PaxDb:Q9ZUU2 PRIDE:Q9ZUU2
            EnsemblPlants:AT2G37240.1 GeneID:818301 KEGG:ath:AT2G37240
            TAIR:At2g37240 eggNOG:NOG304345 HOGENOM:HOG000083460
            InParanoid:Q9ZUU2 OMA:MEGYRQD PhylomeDB:Q9ZUU2
            ProtClustDB:CLSN2688748 Genevestigator:Q9ZUU2 GermOnline:AT2G37240
            Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833 Uniprot:Q9ZUU2
        Length = 248

 Score = 134 (52.2 bits), Expect = 3.7e-08, P = 3.7e-08
 Identities = 37/123 (30%), Positives = 56/123 (45%)

Query:    31 VLPISSPKPRTPTISSSKSRNNAISRPRLLVRASATEFPANVGDLLGDFSIFTAAGEPVL 90
             VLP  S K    ++S    R +A+    +   +S         D L    +    G  + 
Sbjct:    29 VLPGYSVKSHFRSVSL---RRSAVVVSAITGASSGAGIGKGTADSLDTVKVLDLRGNEIP 85

Query:    91 FKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPNKAQIL 150
               DLW   +  AVVA  RHFGC  C + A+ L E K   D++GV L+ +G G+ ++A   
Sbjct:    86 ISDLWKDRK--AVVAFARHFGCVLCRKRAAYLAEKKDVMDASGVALVLIGPGSIDQANTF 143

Query:   151 AER 153
              E+
Sbjct:   144 VEQ 146


>UNIPROTKB|J3KQD0 [details] [associations]
            symbol:FAM213B "Prostamide/prostaglandin F synthase"
            species:9606 "Homo sapiens" [GO:0001516 "prostaglandin biosynthetic
            process" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0016616 "oxidoreductase activity, acting on the CH-OH group of
            donors, NAD or NADP as acceptor" evidence=IEA] EMBL:AL139246
            CTD:127281 KO:K15717 RefSeq:NP_689584.2 UniGene:Hs.462033
            GeneID:127281 KEGG:hsa:127281 HGNC:HGNC:28390
            ProteinModelPortal:J3KQD0 Ensembl:ENST00000419916 Uniprot:J3KQD0
        Length = 228

 Score = 104 (41.7 bits), Expect = 0.00083, P = 0.00083
 Identities = 31/92 (33%), Positives = 41/92 (44%)

Query:    49 SRNNAISRPRLLVRASATEFPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLR 108
             +R +    P L   A +T   A VG  +   ++    GE V  + LW   E   VVA LR
Sbjct:    16 NRESGSREPGLAAAAMSTVDLARVGACILKHAV---TGEAVELRSLW--REHACVVAGLR 70

Query:   109 HFGCPCCWELASALKESKARFDSAGVKLIAVG 140
              FGC  C  +A  L       D  GV+L+ VG
Sbjct:    71 RFGCVVCRWIAQDLSSLAGLLDQHGVRLVGVG 102


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.134   0.401    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      186       186   0.00083  110 3  11 22  0.41    32
                                                     31  0.41    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  594 (63 KB)
  Total size of DFA:  148 KB (2090 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.55u 0.10s 18.65t   Elapsed:  00:00:01
  Total cpu time:  18.55u 0.10s 18.65t   Elapsed:  00:00:02
  Start:  Thu May  9 23:01:05 2013   End:  Thu May  9 23:01:07 2013

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