BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029880
(186 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZUU2|AAED1_ARATH Thioredoxin-like protein AAED1, chloroplastic OS=Arabidopsis
thaliana GN=At2g37240 PE=2 SV=2
Length = 248
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 7/146 (4%)
Query: 31 VLPISSPKPRTPTISSSKSRNNAISRPRLLVRASATEFPANVGDLLGDFSIFTAAGEPVL 90
VLP S K ++S R +A+ + +S D L + G +
Sbjct: 29 VLPGYSVKSHFRSVSL---RRSAVVVSAITGASSGAGIGKGTADSLDTVKVLDLRGNEIP 85
Query: 91 FKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTPNKAQIL 150
DLW + AVVA RHFGC C + A+ L E K D++GV L+ +G G+ ++A
Sbjct: 86 ISDLWKDRK--AVVAFARHFGCVLCRKRAAYLAEKKDVMDASGVALVLIGPGSIDQANTF 143
Query: 151 AERVGNVFITQVLSLPLEVTPSLFKF 176
E+ F +V + P + +F
Sbjct: 144 VEQ--TKFKGEVYADPNHASYEALEF 167
>sp|Q58CY6|PGFS_BOVIN Prostamide/prostaglandin F synthase OS=Bos taurus GN=FAM213B PE=2
SV=1
Length = 201
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 86 GEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVG 140
GE V ++LW E VVA LR FGC C +A L K D GV+L+ VG
Sbjct: 20 GEAVELRNLW--QEQACVVAGLRRFGCMVCRWIARDLSNLKGLLDQHGVRLVGVG 72
>sp|C1C416|PGFS_LITCT Prostamide/prostaglandin F synthase OS=Lithobates catesbeiana
GN=fam213b PE=2 SV=1
Length = 201
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 86 GEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVG 140
GE V F+ LW N +V+ LR FGC C +A + + K D+ ++LI +G
Sbjct: 20 GETVEFQTLWKDN--TSVIFFLRRFGCQICRWIAKDVSQLKESLDANQIRLIGIG 72
>sp|A9CQL8|PGFS_PIG Prostamide/prostaglandin F synthase OS=Sus scrofa GN=FAM213B PE=1
SV=1
Length = 202
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 86 GEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVG 140
GE V + LW E VVA LR FGC C +A L K D GV+L+ VG
Sbjct: 20 GEAVELRSLW--QEQACVVAGLRRFGCMVCRWIARDLSSLKGLLDQHGVRLVGVG 72
>sp|Q8TBF2|PGFS_HUMAN Prostamide/prostaglandin F synthase OS=Homo sapiens GN=FAM213B PE=2
SV=1
Length = 198
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 86 GEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVG 140
GE V + LW E VVA LR FGC C +A L D GV+L+ VG
Sbjct: 20 GEAVELRSLW--REHACVVAGLRRFGCVVCRWIAQDLSSLAGLLDQHGVRLVGVG 72
>sp|Q148E0|AAED1_BOVIN Thioredoxin-like protein AAED1 OS=Bos taurus GN=AAED1 PE=2 SV=1
Length = 228
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 76 LGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASAL-KESKARFDSAGV 134
+ + + A+G PVLF +L+ + A+V +RHF C C E L K K+ A V
Sbjct: 36 VAELPVLDASGRPVLFGELFRERR--AIVVFVRHFLCYICKEYVEDLAKIPKSFLQEANV 93
Query: 135 KLIAVG 140
LI +G
Sbjct: 94 TLIVIG 99
>sp|Q5R7S9|PGFS_PONAB Prostamide/prostaglandin F synthase OS=Pongo abelii GN=FAM213B PE=2
SV=1
Length = 198
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 86 GEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVG 140
GE V + LW E VVA LR FGC C +A L D GV+L+ VG
Sbjct: 20 GEAVELRSLW--RERACVVAGLRRFGCVVCRWIAQDLSSLAGLLDQHGVRLVGVG 72
>sp|Q641F0|F213A_XENLA Redox-regulatory protein FAM213A OS=Xenopus laevis GN=fam213a PE=2
SV=2
Length = 227
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 14/85 (16%)
Query: 74 DLLGDFSIFTAAGEPVLFK--DLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDS 131
D L + + T EP LFK DLW+++ AV+ +R GC C E AS L K + D
Sbjct: 46 DYLEETELKTIGEEPRLFKAKDLWERDG--AVIMAVRRPGCFLCREEASGLSTLKPQLDQ 103
Query: 132 AGVKLIAVGVGTPNKAQILAERVGN 156
GV L A I+ E +GN
Sbjct: 104 LGVPLYA----------IVKENIGN 118
>sp|Q28IJ3|PGFS_XENTR Prostamide/prostaglandin F synthase OS=Xenopus tropicalis
GN=fam213b PE=2 SV=1
Length = 201
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 85 AGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGVGTP 144
+GE V K LW E V+ LR FGC C +A + + KA D+ ++L+ +G P
Sbjct: 19 SGEMVELKSLW--KEKTTVLLFLRRFGCQICRWIAKDIGKLKASCDAHQIRLVGIG---P 73
Query: 145 NKAQILAERVGNVF 158
+ + GN F
Sbjct: 74 EEVGLKEFLEGNFF 87
>sp|Q9DB60|PGFS_MOUSE Prostamide/prostaglandin F synthase OS=Mus musculus GN=Fam213b PE=1
SV=1
Length = 201
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 86 GEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVG 140
GE V + LW E VVA LR FGC C +A L ++ D V+L+ VG
Sbjct: 20 GEAVELRSLW--QEKACVVAGLRRFGCMVCRWIAQDLSNLRSILDQHDVRLVGVG 72
>sp|D3ZVR7|PGFS_RAT Prostamide/prostaglandin F synthase OS=Rattus norvegicus GN=Fam213b
PE=3 SV=1
Length = 201
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 86 GEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVG 140
GE V + LW E VVA LR FGC C +A L + D V+L+ +G
Sbjct: 20 GEAVELRSLW--QEKACVVAGLRRFGCMVCRWIAQDLSNLRGILDQNDVRLVGIG 72
>sp|A0JPD7|F213A_XENTR Redox-regulatory protein FAM213A OS=Xenopus tropicalis GN=fam213a
PE=2 SV=1
Length = 227
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 74 DLLGDFSIFTAAGEPVLFK--DLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDS 131
D L + + EP FK DLW++N AVV +R GC C E AS L K++ D
Sbjct: 46 DYLEETELKAIGDEPKSFKAKDLWEKNG--AVVMAVRRPGCFLCREEASDLSSLKSQLDQ 103
Query: 132 AGVKLIAV 139
GV L AV
Sbjct: 104 LGVPLYAV 111
>sp|Q9BRX8|F213A_HUMAN Redox-regulatory protein FAM213A OS=Homo sapiens GN=FAM213A PE=1
SV=3
Length = 229
Score = 37.7 bits (86), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 74 DLLGDFSIFTAAGEPVLFK--DLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDS 131
+ L D + T EP FK +LW++N AV+ +R GC C E A+ L K+ D
Sbjct: 47 EYLEDIDLKTLEKEPRTFKAKELWEKNG--AVIMAVRRPGCFLCREEAADLSSLKSMLDQ 104
Query: 132 AGVKLIAV 139
GV L AV
Sbjct: 105 LGVPLYAV 112
>sp|Q6AZG8|PGFS_XENLA Prostamide/prostaglandin F synthase OS=Xenopus laevis GN=fam213b
PE=2 SV=1
Length = 201
Score = 37.0 bits (84), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 85 AGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVG 140
+GE V K LW E V+ LR FGC C +A + + K D ++L+ +G
Sbjct: 19 SGEMVELKSLW--KEQTTVLLFLRRFGCQICRWIAKDMGKLKESCDVHQIRLVGIG 72
>sp|Q9CYH2|F213A_MOUSE Redox-regulatory protein FAM213A OS=Mus musculus GN=Fam213a PE=1
SV=2
Length = 218
Score = 35.4 bits (80), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 74 DLLGDFSIFTAAGEPVLFK--DLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDS 131
+ L D + T EP FK +LW++N AV+ +R GC C A+ L K + D
Sbjct: 36 EYLEDIDLKTLEKEPRTFKAKELWEKNG--AVIMAVRRPGCFLCRAEAADLMSLKPKLDE 93
Query: 132 AGVKLIAV 139
GV L AV
Sbjct: 94 LGVPLYAV 101
>sp|A1WFH8|HPRK_VEREI HPr kinase/phosphorylase OS=Verminephrobacter eiseniae (strain
EF01-2) GN=hprK PE=3 SV=1
Length = 318
Score = 35.4 bits (80), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Query: 101 VAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVG---VGT-----PNKAQILAE 152
V+ AL F P WE + L S+ RFD V+L + G VG P + QIL E
Sbjct: 6 VSADALFEEFRGPLKWEWVAGLGASERRFDEVVVRLASSGADLVGYLNYIHPYRVQILGE 65
Query: 153 R 153
R
Sbjct: 66 R 66
>sp|Q6AXX6|F213A_RAT Redox-regulatory protein FAM213A OS=Rattus norvegicus GN=Fam213a
PE=1 SV=1
Length = 229
Score = 35.0 bits (79), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 74 DLLGDFSIFTAAGEPVLFK--DLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDS 131
+ L D + T EP FK +LW++N AV+ +R GC C A+ L K + D
Sbjct: 47 EYLEDIDLKTLEKEPRTFKAKELWEKNG--AVIMAVRRPGCFLCRAEAADLMSLKPKLDE 104
Query: 132 AGVKLIAV 139
GV L AV
Sbjct: 105 LGVPLYAV 112
>sp|Q6NV24|PGFS_DANRE Prostamide/prostaglandin F synthase OS=Danio rerio GN=fam213b PE=2
SV=1
Length = 201
Score = 34.7 bits (78), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 83 TAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVG 140
T GE V LW E V+ LR FGC C +A+ + + + + G+ L+ +G
Sbjct: 17 TTTGEMVEIGSLW--REQAVVLFFLRRFGCQVCRWMAAEVSKLEKDLKAHGIALVGIG 72
>sp|Q9D1A0|AAED1_MOUSE Thioredoxin-like protein AAED1 OS=Mus musculus GN=Aaed1 PE=2 SV=1
Length = 226
Score = 34.7 bits (78), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 63 ASATEFPANVGDLLGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASAL 122
S TE + + + + A+G V F L+ + AVV +RHF C C E L
Sbjct: 21 GSVTERGQPLAAAVAELPVLDASGRRVTFGALFRERR--AVVVFVRHFLCYVCKEYVEDL 78
Query: 123 -KESKARFDSAGVKLIAVG 140
K K+ A V LI +G
Sbjct: 79 AKIPKSVLREADVTLIVIG 97
>sp|Q3ZBK2|F213A_BOVIN Redox-regulatory protein FAM213A OS=Bos taurus GN=FAM213A PE=2 SV=1
Length = 218
Score = 34.3 bits (77), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 74 DLLGDFSIFTAAGEPVLFKD--LWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDS 131
+ L D + T + V FK LW++N AV+ +R GC C E A+ L K + D
Sbjct: 36 EYLEDIDLKTLEKDAVTFKAKALWEKNG--AVIMAVRRPGCFLCREEATDLSSLKPKLDE 93
Query: 132 AGVKLIAV 139
GV L AV
Sbjct: 94 LGVPLYAV 101
>sp|P35770|E321_ADE1P Early E3 20.6 kDa glycoprotein OS=Human adenovirus B serotype 11
(strain Slobiski) PE=3 SV=1
Length = 187
Score = 33.5 bits (75), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 31 VLPISSPKPRTPTISSSKSRNNAISRP 57
VLP ++P PRT T SSS NN IS P
Sbjct: 97 VLPSTTPAPRTTTFSSSSVANNTISNP 123
>sp|P35769|E321_ADE1A Early E3 20.2 kDa glycoprotein OS=Human adenovirus B serotype 11
(strain BC34) PE=3 SV=1
Length = 183
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 31 VLPISSPKPRTPTISSSKSRNNAISRP 57
VLP ++P PR T SSS + NN IS P
Sbjct: 97 VLPSTTPAPRKTTFSSSSAANNTISNP 123
>sp|Q9JS33|CYSI_NEIMB Sulfite reductase [NADPH] hemoprotein beta-component OS=Neisseria
meningitidis serogroup B (strain MC58) GN=cysI1 PE=3
SV=1
Length = 589
Score = 32.3 bits (72), Expect = 2.0, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 71 NVGDLLGDFSIFTAAGEPVLFK--DLWDQNEGVAV 103
N+G+ GDF+I T +PVL D WD ++ VA+
Sbjct: 552 NIGEGFGDFAIRTGIVKPVLNAPVDFWDASKAVAI 586
>sp|Q9JUD9|CYSI_NEIMA Sulfite reductase [NADPH] hemoprotein beta-component OS=Neisseria
meningitidis serogroup A / serotype 4A (strain Z2491)
GN=cysI PE=3 SV=1
Length = 589
Score = 32.3 bits (72), Expect = 2.0, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 71 NVGDLLGDFSIFTAAGEPVLFK--DLWDQNEGVAV 103
N+G+ GDF+I T +PVL D WD ++ VA+
Sbjct: 552 NIGEGFGDFAIRTGIVKPVLNAPVDFWDASKAVAI 586
>sp|Q7RTV5|AAED1_HUMAN Thioredoxin-like protein AAED1 OS=Homo sapiens GN=AAED1 PE=2 SV=1
Length = 226
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 76 LGDFSIFTAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASAL-KESKARFDSAGV 134
+ + + A G+ V F L+ + AVV +RHF C C E L K ++ A V
Sbjct: 34 VAELPVLDARGQRVPFGALFRERR--AVVVFVRHFLCYICKEYVEDLAKIPRSFLQEANV 91
Query: 135 KLIAVG 140
LI +G
Sbjct: 92 TLIVIG 97
>sp|A9LZ72|CYSI_NEIM0 Sulfite reductase [NADPH] hemoprotein beta-component OS=Neisseria
meningitidis serogroup C (strain 053442) GN=cysI PE=3
SV=1
Length = 589
Score = 31.6 bits (70), Expect = 3.1, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 71 NVGDLLGDFSIFTAAGEPVLFK--DLWDQNEGVAV 103
N+G+ GDF+I T +PVL D WD ++ VA+
Sbjct: 552 NIGEGFGDFAIRTGIVKPVLNAPVDFWDVSKAVAI 586
>sp|Q5H9L4|TAF7L_HUMAN Transcription initiation factor TFIID subunit 7-like OS=Homo
sapiens GN=TAF7L PE=2 SV=1
Length = 462
Score = 31.6 bits (70), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 29 SGVLPISSPKPRTPTISSSKSRNNAISRPRLLV-RASATEFPANVGDLLGDFSIFTAAGE 87
G LPISS TPT+S+S+ + P++LV R S T + ++ D+ GD A E
Sbjct: 5 EGQLPISSENDSTPTVSTSEV--TSQQEPQILVDRGSETTYESS-ADIAGDEGTQIPADE 61
>sp|B5X9L9|PGFS_SALSA Prostamide/prostaglandin F synthase OS=Salmo salar GN=fam213b PE=2
SV=1
Length = 200
Score = 31.2 bits (69), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 83 TAAGEPVLFKDLWDQNEGVAVVALLRHFGCPCCWELASALKESKARFDSAGVKLIAVG 140
+ +GE V + LW + V+ LR FGC C A+ + + + + G+ L+ +G
Sbjct: 16 SVSGESVELQSLW--RDKPVVLFFLRRFGCQVCRWTAAEISKLEPDLTAHGIALVGIG 71
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,726,912
Number of Sequences: 539616
Number of extensions: 2424537
Number of successful extensions: 6873
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 6852
Number of HSP's gapped (non-prelim): 38
length of query: 186
length of database: 191,569,459
effective HSP length: 111
effective length of query: 75
effective length of database: 131,672,083
effective search space: 9875406225
effective search space used: 9875406225
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)