Query 029886
Match_columns 186
No_of_seqs 123 out of 135
Neff 6.1
Searched_HMMs 13730
Date Mon Mar 25 07:56:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029886.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/029886hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1xvwa1 c.47.1.10 (A:1-153) Pu 76.3 1.4 9.9E-05 30.8 4.2 76 12-91 7-93 (153)
2 d1xvqa_ c.47.1.10 (A:) Thiol p 70.2 3.2 0.00024 29.5 5.1 61 12-79 22-88 (166)
3 d1xzoa1 c.47.1.10 (A:3-174) Th 59.9 9.2 0.00067 26.8 5.9 60 12-76 10-78 (172)
4 d1st9a_ c.47.1.10 (A:) Thiol-d 54.2 7.7 0.00056 25.9 4.4 62 12-74 4-67 (137)
5 d1qxha_ c.47.1.10 (A:) Thiol p 50.4 13 0.00095 26.0 5.3 61 13-79 24-90 (164)
6 d1jfua_ c.47.1.10 (A:) Membran 47.4 13 0.00095 25.9 4.9 60 13-74 36-98 (176)
7 d2a4va1 c.47.1.10 (A:59-214) P 44.6 3.8 0.00027 28.8 1.4 77 12-93 10-98 (156)
8 d2cx4a1 c.47.1.10 (A:4-163) Ba 42.1 15 0.0011 25.0 4.3 79 12-92 7-95 (160)
9 d1j5ya2 d.94.2.1 (A:68-174) Pu 40.6 47 0.0034 22.2 7.4 53 42-109 51-105 (107)
10 d1q98a_ c.47.1.10 (A:) Thiol p 39.1 27 0.0019 24.2 5.5 75 12-92 21-106 (164)
11 d1zyea1 c.47.1.10 (A:6-163) Pe 34.2 21 0.0015 24.7 4.1 76 13-93 3-99 (158)
12 d1g97a2 c.68.1.5 (A:2-251) N-a 34.0 27 0.0019 24.5 4.8 62 36-105 168-241 (250)
13 d2fy6a1 c.47.1.10 (A:33-175) P 34.0 23 0.0017 23.4 4.2 41 5-54 97-139 (143)
14 d1psqa_ c.47.1.10 (A:) Probabl 33.4 32 0.0023 23.6 5.1 62 12-79 21-88 (163)
15 d1o8xa_ c.47.1.10 (A:) Trypare 31.0 19 0.0014 23.9 3.3 30 12-42 5-34 (144)
16 d1rfea_ b.45.1.1 (A:) Hypothet 30.2 15 0.0011 25.2 2.6 91 1-102 9-107 (160)
17 d1q8ia1 c.55.3.5 (A:2-389) Exo 27.7 1.2E+02 0.0087 23.8 8.4 80 16-108 22-101 (388)
18 d1qmva_ c.47.1.10 (A:) Thiored 24.7 16 0.0011 26.8 2.0 77 12-93 10-107 (197)
19 d1utaa_ d.58.52.1 (A:) Cell di 23.9 51 0.0037 19.8 4.2 59 36-107 9-67 (77)
20 d1ryaa_ d.113.1.5 (A:) GDP-man 22.6 33 0.0024 23.1 3.3 31 1-31 4-38 (160)
21 d1s6la2 d.357.1.2 (A:81-212) A 22.6 20 0.0015 25.0 2.1 35 36-79 81-115 (132)
22 d1wp0a1 c.47.1.10 (A:138-297) 22.5 24 0.0018 23.2 2.5 25 16-40 3-27 (160)
23 d2k49a2 d.348.1.1 (A:1-58) Unc 22.0 75 0.0055 18.7 5.9 38 14-60 15-52 (58)
24 d2bmxa1 c.47.1.10 (A:2-170) Al 21.2 42 0.003 23.0 3.7 83 12-99 8-121 (169)
No 1
>d1xvwa1 c.47.1.10 (A:1-153) Putative peroxiredoxin Rv2238c/MT2298 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=76.29 E-value=1.4 Score=30.76 Aligned_cols=76 Identities=18% Similarity=0.401 Sum_probs=48.2
Q ss_pred CCcEEEEEcCCCCeEEEEcCCCCceEEEeee-------CHHHHHHHHHHHHhcCcccccCCeEEEEeeccchhhc----c
Q 029886 12 GVPVYALSNCNEEFVLVSGAKTGKSLGLMCF-------KKEDAEALLHQMKSMDPAMRKEGSRVVPVPLNKVFQL----K 80 (186)
Q Consensus 12 ~VPVF~vtn~~g~p~l~~~~~~~~~~~lFf~-------~~~DA~~~L~~~k~~~p~~~~~~~kV~~v~L~~vy~l----~ 80 (186)
..|-|+++|.+|..+-.+.-.+.+.+=+||+ +..++.++.+.. .++...|+.|..++.+....+ .
T Consensus 7 ~aPdF~l~d~~G~~~slsd~~g~~~vvl~~~~~~~cp~C~~e~~~l~~~~----~~~~~~~~~vi~vs~d~~~~~~~~~~ 82 (153)
T d1xvwa1 7 TAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHL----PEFENDDSAALAISVGPPPTHKIWAT 82 (153)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTG----GGTSSSSEEEEEEESCCHHHHHHHHH
T ss_pred CCcCeEEECCCCCEEeHHHHcCCCcEEEEecccccccchhhhhhhhhhhh----hhhcccccccccccchhhhHHHHHhh
Confidence 4799999999999998876665443333333 234444444433 444444689999998877665 3
Q ss_pred ccCeeEEEecC
Q 029886 81 VNGVAFRLIPE 91 (186)
Q Consensus 81 ~~~~~f~~vP~ 91 (186)
..++.|.++-+
T Consensus 83 ~~~~~~~~l~~ 93 (153)
T d1xvwa1 83 QSGFTFPLLSD 93 (153)
T ss_dssp HHTCCSCEEEC
T ss_pred hhccceeEEec
Confidence 44566665544
No 2
>d1xvqa_ c.47.1.10 (A:) Thiol peroxidase Tpx {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=70.24 E-value=3.2 Score=29.45 Aligned_cols=61 Identities=11% Similarity=0.119 Sum_probs=43.2
Q ss_pred CCcEEEEEcCCCCeEEEEcCCCCceEEEee------eCHHHHHHHHHHHHhcCcccccCCeEEEEeeccchhhc
Q 029886 12 GVPVYALSNCNEEFVLVSGAKTGKSLGLMC------FKKEDAEALLHQMKSMDPAMRKEGSRVVPVPLNKVFQL 79 (186)
Q Consensus 12 ~VPVF~vtn~~g~p~l~~~~~~~~~~~lFf------~~~~DA~~~L~~~k~~~p~~~~~~~kV~~v~L~~vy~l 79 (186)
..|=|++.+.+|+.+-.+.-.|..++-+|| .+..+...+-++++.. |++|..|+.+..+.+
T Consensus 22 ~aP~F~L~~~~g~~v~L~d~~Gk~vvl~f~~~~~~p~C~~e~~~l~~~~~~~-------g~~vv~Is~d~~~~~ 88 (166)
T d1xvqa_ 22 PAPAFTLTGGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAAS-------GATVLCVSKDLPFAQ 88 (166)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHHT-------TCEEEEEESSCHHHH
T ss_pred CCCCeEEECCCCCEEehHHhCCcEEEEEeeecccccccHHHHHHHhhhcccc-------cccccccccchHHHH
Confidence 368899999999998877655555544442 1556666665554322 589999999998887
No 3
>d1xzoa1 c.47.1.10 (A:3-174) Thioredoxin-like protein Sco1 (YpmQ), soluble domain {Bacillus subtilis [TaxId: 1423]}
Probab=59.93 E-value=9.2 Score=26.81 Aligned_cols=60 Identities=15% Similarity=0.177 Sum_probs=35.5
Q ss_pred CCcEEEEEcCCCCeEEEEcCCCCceEEEeee------CHHHHHH---HHHHHHhcCcccccCCeEEEEeeccch
Q 029886 12 GVPVYALSNCNEEFVLVSGAKTGKSLGLMCF------KKEDAEA---LLHQMKSMDPAMRKEGSRVVPVPLNKV 76 (186)
Q Consensus 12 ~VPVF~vtn~~g~p~l~~~~~~~~~~~lFf~------~~~DA~~---~L~~~k~~~p~~~~~~~kV~~v~L~~v 76 (186)
.+|-|+++|.+|+.+-.+.-.|..++=.|+. ++..... +.++++.. +.. +.+..|++|-.
T Consensus 10 ~~p~F~l~d~~G~~vsl~d~~Gk~vvl~F~~t~Cp~~C~~~~~~l~~~~~~~~~~----~~~-v~~v~isiDp~ 78 (172)
T d1xzoa1 10 EVEPFTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAE----NID-VRIISFSVDPE 78 (172)
T ss_dssp ECCCCEEECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHT----TCC-CEEEEEESCTT
T ss_pred cCCCeEEEcCCCCEEcHHHhCCCEEEEEEecccccccccccchhhhhhhhhhccc----ccc-ccccccccccc
Confidence 4899999999999998877665433333311 2222222 33333222 223 78888887643
No 4
>d1st9a_ c.47.1.10 (A:) Thiol-disulfide oxidoreductase ResA {Bacillus subtilis [TaxId: 1423]}
Probab=54.22 E-value=7.7 Score=25.92 Aligned_cols=62 Identities=16% Similarity=0.208 Sum_probs=33.9
Q ss_pred CCcEEEEEcCCCCeEEEEcCCCCceEEEeeeCHH--HHHHHHHHHHhcCcccccCCeEEEEeecc
Q 029886 12 GVPVYALSNCNEEFVLVSGAKTGKSLGLMCFKKE--DAEALLHQMKSMDPAMRKEGSRVVPVPLN 74 (186)
Q Consensus 12 ~VPVF~vtn~~g~p~l~~~~~~~~~~~lFf~~~~--DA~~~L~~~k~~~p~~~~~~~kV~~v~L~ 74 (186)
..|-|+++|.+|+.+-.+.-.+. .+-++|+... .....+..+++...+..+.|+.|..++.+
T Consensus 4 ~~P~f~l~~~~G~~~~l~~~~gk-~~li~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~i~~~ 67 (137)
T d1st9a_ 4 DAPNFVLEDTNGKRIELSDLKGK-GVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVG 67 (137)
T ss_dssp ECCCCEEECTTSCEEEGGGGTTS-EEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEES
T ss_pred cCCCeEEECCCcCEEeHHHhCCC-EEEEEEeeccccceeeccccccccccccccccccccccccc
Confidence 37999999999998887766544 4444433221 12222222222212222224888888765
No 5
>d1qxha_ c.47.1.10 (A:) Thiol peroxidase Tpx {Escherichia coli [TaxId: 562]}
Probab=50.40 E-value=13 Score=25.98 Aligned_cols=61 Identities=7% Similarity=0.026 Sum_probs=42.9
Q ss_pred CcEEEEEcCCCCeEEEEcCCCCceEEEee------eCHHHHHHHHHHHHhcCcccccCCeEEEEeeccchhhc
Q 029886 13 VPVYALSNCNEEFVLVSGAKTGKSLGLMC------FKKEDAEALLHQMKSMDPAMRKEGSRVVPVPLNKVFQL 79 (186)
Q Consensus 13 VPVF~vtn~~g~p~l~~~~~~~~~~~lFf------~~~~DA~~~L~~~k~~~p~~~~~~~kV~~v~L~~vy~l 79 (186)
.|=|++.|.+|+.+-.+.-.|..++-+|| .+..++..+-+...+. . |+.|..|+.+....+
T Consensus 24 APdF~L~~~~g~~vsLsd~~GK~vvl~f~~~~~~p~C~~~~~~l~~~~~~~-----~-~~~vv~Is~d~~~~~ 90 (164)
T d1qxha_ 24 AQTFTLVAKDLSDVTLGQFAGKRKVLNIFPSIDTGVCAASVRKFNQLATEI-----D-NTVVLCISADLPFAQ 90 (164)
T ss_dssp CCCCEEECTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHTS-----T-TEEEEEEESSCHHHH
T ss_pred CCCeEEECCCCCEEeHHHhCCCeEEEEEecchhcccchHHHHHHHHHHHhh-----c-cceeeeEEcCCHHHH
Confidence 68899999999999888766555554442 1556666665554322 2 489999999987766
No 6
>d1jfua_ c.47.1.10 (A:) Membrane-anchored thioredoxin-like protein TlpA, soluble domain {Bradyrhizobium japonicum [TaxId: 375]}
Probab=47.37 E-value=13 Score=25.93 Aligned_cols=60 Identities=10% Similarity=0.149 Sum_probs=34.2
Q ss_pred CcEEEEEcCCCCeEEEEcCCCCceEEEeee---CHHHHHHHHHHHHhcCcccccCCeEEEEeecc
Q 029886 13 VPVYALSNCNEEFVLVSGAKTGKSLGLMCF---KKEDAEALLHQMKSMDPAMRKEGSRVVPVPLN 74 (186)
Q Consensus 13 VPVF~vtn~~g~p~l~~~~~~~~~~~lFf~---~~~DA~~~L~~~k~~~p~~~~~~~kV~~v~L~ 74 (186)
+|=|.++|.+|+.+-.+.-.|. ++-++|+ +. ........+++...+....+..|..++.+
T Consensus 36 ~Pdf~l~d~~G~~v~L~~~kGK-~vll~F~a~wC~-~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 98 (176)
T d1jfua_ 36 LPDLAFEDADGKPKKLSDFRGK-TLLVNLWATWCV-PCRKEMPALDELQGKLSGPNFEVVAINID 98 (176)
T ss_dssp CCCCEEECTTSCEEEGGGGTTS-EEEEEEECTTCH-HHHHHHHHHHHHHHHHCBTTEEEEEEECC
T ss_pred CCCeEEECCCcCEEeHHHhCCC-EEEEEeccCccc-chHHHHHhhhhcccccccccccccccccc
Confidence 7889999999999887766654 4444433 22 12333333332222222234778777765
No 7
>d2a4va1 c.47.1.10 (A:59-214) Peroxiredoxin dot5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=44.58 E-value=3.8 Score=28.82 Aligned_cols=77 Identities=9% Similarity=0.245 Sum_probs=51.2
Q ss_pred CCcEEEEEcCCCCeEEEEcCC-CCceEEEeee-------CHHHHHHHHHHHHhcCcccccCCeEEEEeeccchhhc----
Q 029886 12 GVPVYALSNCNEEFVLVSGAK-TGKSLGLMCF-------KKEDAEALLHQMKSMDPAMRKEGSRVVPVPLNKVFQL---- 79 (186)
Q Consensus 12 ~VPVF~vtn~~g~p~l~~~~~-~~~~~~lFf~-------~~~DA~~~L~~~k~~~p~~~~~~~kV~~v~L~~vy~l---- 79 (186)
..|-|++.|.+|+.+-.+.-. .+..+=+||+ +..++.+|-+.. +++... ..+..++-+.+..+
T Consensus 10 ~aP~f~L~~~~g~~~~l~~~~~k~~~vvlff~p~~~cp~C~~~~~~~~~~~----~~~~~~-~~~~~is~d~~~~~~~f~ 84 (156)
T d2a4va1 10 PIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNY----QELKEY-AAVFGLSADSVTSQKKFQ 84 (156)
T ss_dssp BCCSCEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHH----HHHTTT-CEEEEEESCCHHHHHHHH
T ss_pred CCCCeEEECCCCCEEeeHHHcCCccEEEEEecccccCcchhhhhHHHHHHH----HHHhhc-cceeeeccchhhhHHhhh
Confidence 489999999999988876532 2344545533 345555554444 344434 56788888888776
Q ss_pred cccCeeEEEecCHH
Q 029886 80 KVNGVAFRLIPEST 93 (186)
Q Consensus 80 ~~~~~~f~~vP~~~ 93 (186)
+..++.|.++.|+.
T Consensus 85 ~~~~l~f~~L~D~~ 98 (156)
T d2a4va1 85 SKQNLPYHLLSDPK 98 (156)
T ss_dssp HHHTCSSEEEECTT
T ss_pred cccCccceeccchH
Confidence 44588899998864
No 8
>d2cx4a1 c.47.1.10 (A:4-163) Bacterioferritin comigratory protein {Archaeon Aeropyrum pernix [TaxId: 56636]}
Probab=42.08 E-value=15 Score=24.97 Aligned_cols=79 Identities=18% Similarity=0.282 Sum_probs=50.7
Q ss_pred CCcEEEEEcCCCCeEEEEcC--CCCceEEEeee----CHHHHHHHHHHHHhcCcccccCCeEEEEeeccchhhc----cc
Q 029886 12 GVPVYALSNCNEEFVLVSGA--KTGKSLGLMCF----KKEDAEALLHQMKSMDPAMRKEGSRVVPVPLNKVFQL----KV 81 (186)
Q Consensus 12 ~VPVF~vtn~~g~p~l~~~~--~~~~~~~lFf~----~~~DA~~~L~~~k~~~p~~~~~~~kV~~v~L~~vy~l----~~ 81 (186)
..|=|++.|.+|+.+-.+.- +|..++-+| + ++- ....+..+.+...++.+.|..|..++-+....+ ..
T Consensus 7 ~aPdF~L~~~~G~~~~Lsd~~~~gk~vvl~f-~~~~~cp~-C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~ 84 (160)
T d2cx4a1 7 KAPDFTLPNQDFEPVNLYEVLKRGRPAVLIF-FPAAFSPV-CTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDE 84 (160)
T ss_dssp BCCCCEECCTTSCCEEHHHHHTTSSCEEEEE-CSCTTCHH-HHHHHHHHHHTCTTTSTTCCEEEEEESSCHHHHHHHHHH
T ss_pred CCcCeEeECCCCCEEehHHHhhCCCEEEEEe-cccccCCc-hhhhhhhhhcccccccccccccccccccchhhhhhhccc
Confidence 36889999999998887643 333344333 3 222 334455555555566555688988888776655 34
Q ss_pred cCeeEEEecCH
Q 029886 82 NGVAFRLIPES 92 (186)
Q Consensus 82 ~~~~f~~vP~~ 92 (186)
.++.|.++.|.
T Consensus 85 ~~~~~~~l~D~ 95 (160)
T d2cx4a1 85 NRLAFNLLSDY 95 (160)
T ss_dssp HTCSSEEEECT
T ss_pred ceeeEEEeecC
Confidence 56777777775
No 9
>d1j5ya2 d.94.2.1 (A:68-174) Putative transcriptional regulator TM1602, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=40.60 E-value=47 Score=22.23 Aligned_cols=53 Identities=21% Similarity=0.336 Sum_probs=37.7
Q ss_pred eCHHHHHHHHHHHHhcCcccccCCeEEEEeeccchhhccccCee--EEEecCHHHHHHHHHHHHHcCCCC
Q 029886 42 FKKEDAEALLHQMKSMDPAMRKEGSRVVPVPLNKVFQLKVNGVA--FRLIPESTQVKNALREMEKAGFSD 109 (186)
Q Consensus 42 ~~~~DA~~~L~~~k~~~p~~~~~~~kV~~v~L~~vy~l~~~~~~--f~~vP~~~qv~~A~~l~~~~g~~~ 109 (186)
=|+.|.+.|++.+++.+-.. .+.+ ++|+. ---.|+.+.++.+.+-|++.|.-+
T Consensus 51 ~sr~Dv~~F~~~l~~~~a~~--------------L~~L-T~GvH~HtI~a~~ee~l~~I~~~L~~~G~L~ 105 (107)
T d1j5ya2 51 SSEEEVLKFVNLMEMAKTEP--------------LLTL-SGGVHLHTIEAPDEETMERIMRELKKKGFLI 105 (107)
T ss_dssp CSHHHHHHHHHHHHHCCSCC--------------STTG-GGGEEEEEEEESSHHHHHHHHHHHHHTTCBC
T ss_pred CCHHHHHHHHHHHhccCCcc--------------HHHh-cCCEeeEEEEeCCHHHHHHHHHHHHHcCCcc
Confidence 49999999999998764221 1222 23443 335799999999999999988743
No 10
>d1q98a_ c.47.1.10 (A:) Thiol peroxidase Tpx {Haemophilus influenzae [TaxId: 727]}
Probab=39.15 E-value=27 Score=24.22 Aligned_cols=75 Identities=9% Similarity=0.079 Sum_probs=50.5
Q ss_pred CCcEEEEEcCCCCeEEEEcCCCCceEEEee------eCHHHHHHHHHHHHhcCcccccCCeEEEEeeccchhhc----cc
Q 029886 12 GVPVYALSNCNEEFVLVSGAKTGKSLGLMC------FKKEDAEALLHQMKSMDPAMRKEGSRVVPVPLNKVFQL----KV 81 (186)
Q Consensus 12 ~VPVF~vtn~~g~p~l~~~~~~~~~~~lFf------~~~~DA~~~L~~~k~~~p~~~~~~~kV~~v~L~~vy~l----~~ 81 (186)
..|-|++.|.+|..+-.+.-.|..++-+|| .+..++.+|-+.+.+ +. |+.|..|+-+..+.+ ..
T Consensus 21 ~APdF~L~d~~g~~v~Lsd~~Gk~vVL~f~p~~~tp~C~~e~~~~~~~~~~----~~--~~~vi~iS~d~~~~~~~~~~~ 94 (164)
T d1q98a_ 21 IVENFILVGNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAK----LS--NTIVLCISADLPFAQARFCGA 94 (164)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHH----ST--TEEEEEEESSCHHHHTTCTTT
T ss_pred CCCCcEEECCCCCEEeehhhCCcEEEEEecCccccCcccHHHHHHHHHHHH----hc--cceEEeecCCcHHHHHHHHHH
Confidence 368899999999999887666555554443 155667776665543 22 389999999988877 23
Q ss_pred cCee-EEEecCH
Q 029886 82 NGVA-FRLIPES 92 (186)
Q Consensus 82 ~~~~-f~~vP~~ 92 (186)
.++. +.++.+.
T Consensus 95 ~~~~~~~~~~~~ 106 (164)
T d1q98a_ 95 EGIENAKTVSTF 106 (164)
T ss_dssp TTCTTEEEEECT
T ss_pred hCCccccccccc
Confidence 4442 5555553
No 11
>d1zyea1 c.47.1.10 (A:6-163) Peroxiredoxin-3 (AOP-1, SP-22) {Cow (Bos taurus) [TaxId: 9913]}
Probab=34.18 E-value=21 Score=24.71 Aligned_cols=76 Identities=12% Similarity=0.172 Sum_probs=48.2
Q ss_pred CcEEEEE---cCCCCeEEEEcCCCCceEEEeee-------CHHHHHHHHHHHHhcCcccccCCeEEEEeeccchhhc---
Q 029886 13 VPVYALS---NCNEEFVLVSGAKTGKSLGLMCF-------KKEDAEALLHQMKSMDPAMRKEGSRVVPVPLNKVFQL--- 79 (186)
Q Consensus 13 VPVF~vt---n~~g~p~l~~~~~~~~~~~lFf~-------~~~DA~~~L~~~k~~~p~~~~~~~kV~~v~L~~vy~l--- 79 (186)
-|=|+++ |++|..+-.+.-.|..++-+| + +..++..|-+.. +++.+.|+.|..|+.+.+..+
T Consensus 3 AP~F~l~~~~~~~~~~vsL~d~~Gk~vVL~F-yp~~~tp~C~~e~~~~~~~~----~~~~~~~~~vigIS~d~~~~~~~~ 77 (158)
T d1zyea1 3 APYFKGTAVVSGEFKEISLDDFKGKYLVLFF-YPLDFTFVCPTEIIAFSDKA----SEFHDVNCEVVAVSVDSHFSHLAW 77 (158)
T ss_dssp CCCCEEEEECSSSEEEEEGGGGTTSEEEEEE-CSCTTCSSSHHHHHHHHHHH----HHHHHTTEEEEEEESSCHHHHHHH
T ss_pred CCCCccceeeCCCccEEeHHHhCCCeEEEEE-eehhcCCccccchhhHHHhH----HHhhcCCceEEeccCcCHHHHHHH
Confidence 4778764 666666666655555555444 4 455555544443 333333699999999998876
Q ss_pred -c-------ccCeeEEEecCHH
Q 029886 80 -K-------VNGVAFRLIPEST 93 (186)
Q Consensus 80 -~-------~~~~~f~~vP~~~ 93 (186)
. ..++.|.++.|..
T Consensus 78 ~~~~~~~~~~~~~~f~llsD~~ 99 (158)
T d1zyea1 78 INTPRKNGGLGHMNIALLSDLT 99 (158)
T ss_dssp HTSCGGGTCCCSCSSEEEECTT
T ss_pred HhhhHhhccccccccccccccc
Confidence 1 1377899999876
No 12
>d1g97a2 c.68.1.5 (A:2-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=34.00 E-value=27 Score=24.52 Aligned_cols=62 Identities=18% Similarity=0.280 Sum_probs=36.3
Q ss_pred eEEEeeeCHHHHHHHHHHHHhcCcc-----------cccCCeEEEEeeccchhhccccCeeEEE-ecCHHHHHHHHHHHH
Q 029886 36 SLGLMCFKKEDAEALLHQMKSMDPA-----------MRKEGSRVVPVPLNKVFQLKVNGVAFRL-IPESTQVKNALREME 103 (186)
Q Consensus 36 ~~~lFf~~~~DA~~~L~~~k~~~p~-----------~~~~~~kV~~v~L~~vy~l~~~~~~f~~-vP~~~qv~~A~~l~~ 103 (186)
..|+|+|+......+++.+...+.. +...|.+|..+..+.-+.. + |.++++++.|..+++
T Consensus 168 ~~g~y~f~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~~~~~~~~~~--------~gInt~~dL~~ae~~~~ 239 (250)
T d1g97a2 168 NTGTYVFDNERLFEALKNINTNNAQGEYYITDVIGIFRETGEKVGAYTLKDFDES--------LGVNDRVALATAESVMR 239 (250)
T ss_dssp EEEEEEEEHHHHHHHHTTCCCCSTTCSCCGGGHHHHHHHTTCCEEEEECSSGGGG--------CCCSSHHHHHHHHHHHH
T ss_pred eeeeeecchHHHHHHHHHhccCcchhhHHHhHHHHHHHHCCCeEEEEEcCCccee--------cCCCCHHHHHHHHHHHH
Confidence 5788888888777776655433221 0111234444444332221 2 779999999998887
Q ss_pred Hc
Q 029886 104 KA 105 (186)
Q Consensus 104 ~~ 105 (186)
+.
T Consensus 240 ~~ 241 (250)
T d1g97a2 240 RR 241 (250)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 13
>d2fy6a1 c.47.1.10 (A:33-175) Peptide methionine sulfoxide reductase MsrA/MsrB, N-terminal domain {Neisseria meningitidis serogroup A [TaxId: 65699]}
Probab=33.99 E-value=23 Score=23.39 Aligned_cols=41 Identities=22% Similarity=0.301 Sum_probs=27.6
Q ss_pred HHHHhcC--CCcEEEEEcCCCCeEEEEcCCCCceEEEeeeCHHHHHHHHHHH
Q 029886 5 AIEERLA--GVPVYALSNCNEEFVLVSGAKTGKSLGLMCFKKEDAEALLHQM 54 (186)
Q Consensus 5 ~I~ekL~--~VPVF~vtn~~g~p~l~~~~~~~~~~~lFf~~~~DA~~~L~~~ 54 (186)
++.+.++ ++|.+.+.|++|..+-... | . ++.++..++|+++
T Consensus 97 ~~~~~~~v~~~P~~~liD~~G~i~~~~~-------G-~-~~~~~~~~~l~~~ 139 (143)
T d2fy6a1 97 TIAQSLNISVYPSWALIGKDGDVQRIVK-------G-S-INEAQALALIRDP 139 (143)
T ss_dssp HHHHHTTCCSSSEEEEECTTSCEEEEEE-------S-C-CCHHHHHHHHHCT
T ss_pred HHHHHcCCCccCEEEEECCCCEEEEEEE-------C-C-CCHHHHHHHHHHH
Confidence 4555555 7999999999998554432 1 1 4677777777655
No 14
>d1psqa_ c.47.1.10 (A:) Probable thiol peroxidase PsaD {Streptococcus pneumoniae [TaxId: 1313]}
Probab=33.39 E-value=32 Score=23.64 Aligned_cols=62 Identities=8% Similarity=0.080 Sum_probs=41.5
Q ss_pred CCcEEEEEcCCCCeEEEEcCCCCceEEEeee------CHHHHHHHHHHHHhcCcccccCCeEEEEeeccchhhc
Q 029886 12 GVPVYALSNCNEEFVLVSGAKTGKSLGLMCF------KKEDAEALLHQMKSMDPAMRKEGSRVVPVPLNKVFQL 79 (186)
Q Consensus 12 ~VPVF~vtn~~g~p~l~~~~~~~~~~~lFf~------~~~DA~~~L~~~k~~~p~~~~~~~kV~~v~L~~vy~l 79 (186)
..|=|++.|.+|..+-.+.-.|..++=+||- +..++.++-+.+ .+.. |+.+..|+.+..+.+
T Consensus 21 ~aPdF~L~~~~g~~vsLsd~~gk~~vl~f~~~~~~p~C~~~~~~l~~~~----~~~~--~~~vv~Is~d~~~~~ 88 (163)
T d1psqa_ 21 KALDFSLTTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEEL----AGLD--NTVVLTVSMDLPFAQ 88 (163)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHT----TTCT--TEEEEEEESSCHHHH
T ss_pred CCCCeEEECCCCCEEehHHhCCcEEEEEeccccccccchhhHHHHHHHH----Hhhc--ccceEEEEeccHHHH
Confidence 3788999999999998776665555555531 355555554332 2332 488999998877765
No 15
>d1o8xa_ c.47.1.10 (A:) Tryparedoxin I {Crithidia fasciculata [TaxId: 5656]}
Probab=30.97 E-value=19 Score=23.86 Aligned_cols=30 Identities=13% Similarity=-0.093 Sum_probs=22.9
Q ss_pred CCcEEEEEcCCCCeEEEEcCCCCceEEEeee
Q 029886 12 GVPVYALSNCNEEFVLVSGAKTGKSLGLMCF 42 (186)
Q Consensus 12 ~VPVF~vtn~~g~p~l~~~~~~~~~~~lFf~ 42 (186)
-+|=|+++|..|..+-.+.-.| +++-++|+
T Consensus 5 ~~P~~~~~~~~g~~v~l~~l~G-K~vll~Fw 34 (144)
T d1o8xa_ 5 YLPGIEKLRRGDGEVEVKSLAG-KLVFFYFS 34 (144)
T ss_dssp TSTTCCEEEETTEEEEGGGGTT-CEEEEEEE
T ss_pred CCCCcEeEcCCCCEEeHHHhCC-CEEEEEec
Confidence 4788999999999998887664 56666655
No 16
>d1rfea_ b.45.1.1 (A:) Hypothetical protein Rv2991 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=30.22 E-value=15 Score=25.17 Aligned_cols=91 Identities=13% Similarity=0.124 Sum_probs=49.9
Q ss_pred CCHHHHHHhcCCCcEEEEE--cCCCCeEEEEc---CCCCceEEEeeeCHHHHHHHHHHHHhcCcccccCCeEEEEeeccc
Q 029886 1 MSAEAIEERLAGVPVYALS--NCNEEFVLVSG---AKTGKSLGLMCFKKEDAEALLHQMKSMDPAMRKEGSRVVPVPLNK 75 (186)
Q Consensus 1 l~~~~I~ekL~~VPVF~vt--n~~g~p~l~~~---~~~~~~~~lFf~~~~DA~~~L~~~k~~~p~~~~~~~kV~~v~L~~ 75 (186)
|++++|.+-|+...+..++ +.+|.|.++.. -+++ . ++|++..++.. ...+ .+||.. -+.....+.
T Consensus 9 m~~~ei~~~L~~~~~~~LaT~~~dG~P~~~pv~~~~~~~-~--l~~~t~~~s~k-~~~l-~~np~v-----~l~i~~~~~ 78 (160)
T d1rfea_ 9 MSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDG-E--IWLETKAKSQK-AVNL-RRDPRV-----SFLLEDGDT 78 (160)
T ss_dssp CCHHHHHHHHHHCCCEEEEEECTTSCEEEEEECCEEETT-E--EEEEEETTSHH-HHHH-HHCCEE-----EEEEEECSS
T ss_pred CCHHHHHHHHccCCEEEEEEECCCCCEEEEEEEEEEcCC-E--EEEEecCCceE-Eeee-cCCCeE-----EEEEEcCCc
Confidence 7899999999987776666 67888888642 1122 2 33344333332 3333 345653 333332222
Q ss_pred hhhc---cccCeeEEEecCHHHHHHHHHHH
Q 029886 76 VFQL---KVNGVAFRLIPESTQVKNALREM 102 (186)
Q Consensus 76 vy~l---~~~~~~f~~vP~~~qv~~A~~l~ 102 (186)
-+.. .-.| ..+++++.++...+...+
T Consensus 79 ~~~~~~V~v~G-~A~iv~d~~~~~~~~~~~ 107 (160)
T d1rfea_ 79 YDTLRGVSFEG-VAEIVEEPEALHRVGVSV 107 (160)
T ss_dssp GGGCEEEEEEE-EEEEECCHHHHHHHHHHH
T ss_pred ccceeEEEEEE-EEEEeCCHHHHHHHHHHH
Confidence 1111 1122 336889998887666544
No 17
>d1q8ia1 c.55.3.5 (A:2-389) Exonuclease domain of family B DNA polymerases {Escherichia coli [TaxId: 562]}
Probab=27.67 E-value=1.2e+02 Score=23.81 Aligned_cols=80 Identities=16% Similarity=0.189 Sum_probs=49.7
Q ss_pred EEEEcCCCCeEEEEcCCCCceEEEeeeCHHHHHHHHHHHHhcCcccccCCeEEEEeeccchhhccccCeeEEEecCHHHH
Q 029886 16 YALSNCNEEFVLVSGAKTGKSLGLMCFKKEDAEALLHQMKSMDPAMRKEGSRVVPVPLNKVFQLKVNGVAFRLIPESTQV 95 (186)
Q Consensus 16 F~vtn~~g~p~l~~~~~~~~~~~lFf~~~~DA~~~L~~~k~~~p~~~~~~~kV~~v~L~~vy~l~~~~~~f~~vP~~~qv 95 (186)
|...+.+| |+.+...+ .-++||...++...+-+-+ ...+ +.++.+++|-.... ..+.=-+..+.+++
T Consensus 22 ~~~~t~~G-~~~v~v~~---q~~~f~~~~~~~~~~~~~~-~~~~-----~~~~~~~~l~~f~~---~~V~~vy~~~~~~~ 88 (388)
T d1q8ia1 22 FWLATDNG-PLQVTLAP---QESVAFIPADQVPRAQHIL-QGEQ-----GFRLTPLALKDFHR---QPVYGLYCRAHRQL 88 (388)
T ss_dssp EEEEETTE-EEEEECSC---BCEEEEEEGGGHHHHHHHT-TTCC-----SEEEEEEEEECTTS---CEEEEEEESCHHHH
T ss_pred EEEEcCCC-CEEEEECC---CcEEEEEEcchhHHHHHHH-hhCC-----CceecceeeecCCC---CEEEEEEeCCHHHH
Confidence 44556678 67777654 2455656666654443333 2211 37888888865433 23333456899999
Q ss_pred HHHHHHHHHcCCC
Q 029886 96 KNALREMEKAGFS 108 (186)
Q Consensus 96 ~~A~~l~~~~g~~ 108 (186)
..+.+.++++|..
T Consensus 89 r~l~~~l~~~g~~ 101 (388)
T d1q8ia1 89 MNYEKRLREGGVT 101 (388)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHhhcCCe
Confidence 9999999888763
No 18
>d1qmva_ c.47.1.10 (A:) Thioredoxin peroxidase 2 (thioredoxin peroxidase B, 2-cys peroxiredoxin) {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.68 E-value=16 Score=26.80 Aligned_cols=77 Identities=17% Similarity=0.212 Sum_probs=48.1
Q ss_pred CCcEEEE---EcCCCCeEEEEcCCCCceEEEeee-------CHHHHHHHHHHHHhcCcccccCCeEEEEeeccchhhc--
Q 029886 12 GVPVYAL---SNCNEEFVLVSGAKTGKSLGLMCF-------KKEDAEALLHQMKSMDPAMRKEGSRVVPVPLNKVFQL-- 79 (186)
Q Consensus 12 ~VPVF~v---tn~~g~p~l~~~~~~~~~~~lFf~-------~~~DA~~~L~~~k~~~p~~~~~~~kV~~v~L~~vy~l-- 79 (186)
..|-|.+ .|++|..+-.++-.|..++-+| + +..++.+|-+.+ .++.+.|++|..++.+..+..
T Consensus 10 ~AP~F~l~~~~d~~~~~v~L~d~~Gk~~vL~F-yP~~~tp~C~~e~~~~~~~~----~~f~~~g~~vigIS~D~~~~~~~ 84 (197)
T d1qmva_ 10 PAPDFKATAVVDGAFKEVKLSDYKGKYVVLFF-YPLDFTFVCPTEIIAFSNRA----EDFRKLGCEVLGVSVDSQFTHLA 84 (197)
T ss_dssp BCCCCEEEEEETTEEEEEEGGGGTTSEEEEEE-CSCTTSSHHHHHHHHHHHTH----HHHHTTTEEEEEEESSCHHHHHH
T ss_pred cCCCCCCcceeCCCCcEEeHHHhCCCeEEEEE-ecccccccchhhhHHHHHHH----HHhccCCcEEEEEecCCHHHHHh
Confidence 3688865 4677777766665555444333 3 333444443333 444443699999999988866
Q ss_pred --c-------ccCeeEEEecCHH
Q 029886 80 --K-------VNGVAFRLIPEST 93 (186)
Q Consensus 80 --~-------~~~~~f~~vP~~~ 93 (186)
+ ..++.|.++.|..
T Consensus 85 ~~~~~~~~~~~~~~~fpll~D~~ 107 (197)
T d1qmva_ 85 WINTPRKEGGLGPLNIPLLADVT 107 (197)
T ss_dssp HHTSCGGGTCCCSCSSCEEECTT
T ss_pred hhcchhhhcCcCCCccceEeccc
Confidence 1 1367899999963
No 19
>d1utaa_ d.58.52.1 (A:) Cell division protein FtsN {Escherichia coli [TaxId: 562]}
Probab=23.87 E-value=51 Score=19.84 Aligned_cols=59 Identities=19% Similarity=0.182 Sum_probs=37.4
Q ss_pred eEEEeeeCHHHHHHHHHHHHhcCcccccCCeEEEEeeccchhhccccCeeEEEecCHHHHHHHHHHHHHcCC
Q 029886 36 SLGLMCFKKEDAEALLHQMKSMDPAMRKEGSRVVPVPLNKVFQLKVNGVAFRLIPESTQVKNALREMEKAGF 107 (186)
Q Consensus 36 ~~~lFf~~~~DA~~~L~~~k~~~p~~~~~~~kV~~v~L~~vy~l~~~~~~f~~vP~~~qv~~A~~l~~~~g~ 107 (186)
.+|-| -+++.|+.+.++|+...-+ +.| .+=+..|+ +..-=.++..+.+.++.-++++|.
T Consensus 9 QvGaF-~~~~nA~~l~~~L~~~g~~-----~~i--~~~~~~yR-----V~vGpf~~~~~A~~~~~~L~~~G~ 67 (77)
T d1utaa_ 9 QCGSF-RGAEQAETVRAQLAFEGFD-----SKI--TTNNGWNR-----VVIGPVKGKENADSTLNRLKMAGH 67 (77)
T ss_dssp BCCEE-SCHHHHHHHHHHHHHHTCC-----EEE--EECSSSEE-----EEESSCBTTTHHHHHHHHHHHHCC
T ss_pred EEEEe-cCHHHHHHHHHHHHhcCCc-----cee--cCCCcEEE-----EEECCcCCHHHHHHHHHHHHHcCC
Confidence 47788 7999999999999876321 333 22112221 111123577888888888888875
No 20
>d1ryaa_ d.113.1.5 (A:) GDP-mannose mannosyl hydrolase NudD {Escherichia coli [TaxId: 562]}
Probab=22.60 E-value=33 Score=23.10 Aligned_cols=31 Identities=23% Similarity=0.388 Sum_probs=23.6
Q ss_pred CCHHHHHHhcCCCcEEEE----EcCCCCeEEEEcC
Q 029886 1 MSAEAIEERLAGVPVYAL----SNCNEEFVLVSGA 31 (186)
Q Consensus 1 l~~~~I~ekL~~VPVF~v----tn~~g~p~l~~~~ 31 (186)
|+.++..+.++.+|+.+| .|++|..|++...
T Consensus 4 l~~~~~~~~~~~~p~~~v~~vi~~~~~~vLL~kR~ 38 (160)
T d1ryaa_ 4 LRQEDFATVVRSTPLVSLDFIVENSRGEFLLGKRT 38 (160)
T ss_dssp CCHHHHHHHHHHSCEEEEEEEEECTTSCEEEEEEC
T ss_pred cCHHHHHHHhhcCCEEEEEEEEEeCCCeEEEEEeC
Confidence 577778887888887665 3899998887643
No 21
>d1s6la2 d.357.1.2 (A:81-212) Alkylmercury lyase MerB {Escherichia coli [TaxId: 562]}
Probab=22.57 E-value=20 Score=24.95 Aligned_cols=35 Identities=14% Similarity=0.238 Sum_probs=25.6
Q ss_pred eEEEeeeCHHHHHHHHHHHHhcCcccccCCeEEEEeeccchhhc
Q 029886 36 SLGLMCFKKEDAEALLHQMKSMDPAMRKEGSRVVPVPLNKVFQL 79 (186)
Q Consensus 36 ~~~lFf~~~~DA~~~L~~~k~~~p~~~~~~~kV~~v~L~~vy~l 79 (186)
.+-|| -|.++|++++++ +|+.. -+..++|.+++++
T Consensus 81 ~v~FF-~s~~~a~~W~~~----hp~~~----~~~il~l~eA~~l 115 (132)
T d1s6la2 81 HVHFF-ASVPTAEDWASK----HQGLE----GLAIVSVHEAFGL 115 (132)
T ss_dssp CCEEE-SSHHHHHHHHHT----TCSSS----CCEEEEHHHHHHH
T ss_pred ceeEe-cCHHHHHHHHHh----CCCCC----CcceEeHHHHHHH
Confidence 45566 799999999877 68642 2455888888877
No 22
>d1wp0a1 c.47.1.10 (A:138-297) Thioredoxin-like protein Sco1 (YpmQ), soluble domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.51 E-value=24 Score=23.17 Aligned_cols=25 Identities=12% Similarity=-0.072 Sum_probs=18.4
Q ss_pred EEEEcCCCCeEEEEcCCCCceEEEe
Q 029886 16 YALSNCNEEFVLVSGAKTGKSLGLM 40 (186)
Q Consensus 16 F~vtn~~g~p~l~~~~~~~~~~~lF 40 (186)
|+++|.+|+.+-.+.-.|..++-.|
T Consensus 3 F~L~d~~G~~vsl~d~~GK~vll~F 27 (160)
T d1wp0a1 3 FSLTTHTGERKTDKDYLGQWLLIYF 27 (160)
T ss_dssp CEEEETTSCEEEGGGGTTSEEEEEE
T ss_pred eEEEcCCCCEEcHHHhCCCEEEEEE
Confidence 8899999999988776654444334
No 23
>d2k49a2 d.348.1.1 (A:1-58) Uncharacterized protein SO3888 {Shewanella oneidensis [TaxId: 70863]}
Probab=22.00 E-value=75 Score=18.67 Aligned_cols=38 Identities=24% Similarity=0.267 Sum_probs=26.4
Q ss_pred cEEEEEcCCCCeEEEEcCCCCceEEEeeeCHHHHHHHHHHHHhcCcc
Q 029886 14 PVYALSNCNEEFVLVSGAKTGKSLGLMCFKKEDAEALLHQMKSMDPA 60 (186)
Q Consensus 14 PVF~vtn~~g~p~l~~~~~~~~~~~lFf~~~~DA~~~L~~~k~~~p~ 60 (186)
.-|.+...+|+.+..+ + .| -++.+|+.-++.+|++-|+
T Consensus 15 ~rf~Lka~NGevIa~S-e-------~Y-~sk~~a~~gI~sVk~na~~ 52 (58)
T d2k49a2 15 FKFVLKAGNGEVILTS-E-------LY-TGKSGAMNGIESVQTNSPI 52 (58)
T ss_dssp EEEEEECSSSCEEEEC-C-------CB-SSHHHHHHHHHHHHHHTTC
T ss_pred EEEEEEcCCCCEEEEc-C-------Cc-CCHHHHHHHHHHHHHhCCC
Confidence 3455555555544433 1 35 7999999999999998876
No 24
>d2bmxa1 c.47.1.10 (A:2-170) Alkyl hydroperoxide reductase AhpC {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=21.20 E-value=42 Score=22.98 Aligned_cols=83 Identities=10% Similarity=0.194 Sum_probs=47.1
Q ss_pred CCcEEEEEcCCCC---------------eEEEEcCCCCceEEEeee-------CHHHHHHHHHHHHhcCcccccCCeEEE
Q 029886 12 GVPVYALSNCNEE---------------FVLVSGAKTGKSLGLMCF-------KKEDAEALLHQMKSMDPAMRKEGSRVV 69 (186)
Q Consensus 12 ~VPVF~vtn~~g~---------------p~l~~~~~~~~~~~lFf~-------~~~DA~~~L~~~k~~~p~~~~~~~kV~ 69 (186)
..|=|++++..|. .+..+.-.|..+ =+||+ +..+..++-+.. .++.+.|++|.
T Consensus 8 ~aPdF~l~~~~g~~~~~~~~~~~~~~~~~~~l~d~~GK~v-vl~f~p~~~~p~C~~~~~~~~~~~----~~~~~~g~~vv 82 (169)
T d2bmxa1 8 QFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGKWR-VVFFWPKDFTFVCPTEIAAFSKLN----DEFEDRDAQIL 82 (169)
T ss_dssp BCCCCEEEEECSSCGGGSCCSSGGGGEEEEETTSSTTCEE-EEEECSCTTSCCCHHHHHHHHHTH----HHHHTTTEEEE
T ss_pred CCCCCEEeeccCCcccccccccccccccEeeHHHHCCCeE-EEEEecCCCCcccccccccccccc----ccccccCccee
Confidence 3688888877763 222222233333 33333 555555544433 44444369999
Q ss_pred Eeeccchhhc--------cccCeeEEEecCHH-HHHHHH
Q 029886 70 PVPLNKVFQL--------KVNGVAFRLIPEST-QVKNAL 99 (186)
Q Consensus 70 ~v~L~~vy~l--------~~~~~~f~~vP~~~-qv~~A~ 99 (186)
.++.+..... ....+.|.++.|.. ++..+.
T Consensus 83 ~is~d~~~~~~~~~~~~~~~~~~~f~ll~D~~~~v~~~y 121 (169)
T d2bmxa1 83 GVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAA 121 (169)
T ss_dssp EEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHH
T ss_pred eccccchhhhhhhcccccccccceEEEEeccHHHHHHHc
Confidence 9999987765 12247788888853 344443
Done!