BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029894
(186 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O49603|CVIF2_ARATH Cell wall / vacuolar inhibitor of fructosidase 2 OS=Arabidopsis
thaliana GN=C/VIF2 PE=1 SV=1
Length = 180
Score = 187 bits (476), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/184 (51%), Positives = 124/184 (67%), Gaps = 6/184 (3%)
Query: 1 MGSSIFLFTLFIAFHLLIFRQQPSIFAAADMN-LIQKTCKNTKYYDLCVSSLKSNPRSSS 59
M SS+ +F+ L F I A ++ +I+ TCK T YY CVS+LKS+PRS +
Sbjct: 1 MASSL----IFLLLVTLTFSASTLISAKSNTTTIIESTCKTTNYYKFCVSALKSDPRSPT 56
Query: 60 VDTKGLANIMVGVGFANATATSSYLSSQLLSTKTNDTTLKKVLKECADKYTYAGDSLQAS 119
DTKGLA+IMVGVG NAT+T++Y++ L S DT LKKVL++C++KY A DSL+ +
Sbjct: 57 ADTKGLASIMVGVGMTNATSTANYIAGNL-SATVKDTVLKKVLQDCSEKYALAADSLRLT 115
Query: 120 GQDLATEDYDYAYLHISAAADYPNACHNAFRRSPGLAYPAELARREDGLKQICDVVLGII 179
QDL E YDYA +H+ AA DYPN C N FRR GLAYP E+ RRE L++IC VV GI+
Sbjct: 116 IQDLDDEAYDYASMHVLAAQDYPNVCRNIFRRVKGLAYPVEIRRREASLRRICGVVSGIL 175
Query: 180 DHII 183
D ++
Sbjct: 176 DRLV 179
>sp|P83326|PMEI_ACTDE Pectinesterase inhibitor OS=Actinidia deliciosa GN=PMEI PE=1 SV=2
Length = 185
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 94/168 (55%), Gaps = 7/168 (4%)
Query: 19 FRQQPSIFAAADMNLIQKTCKNTKYYDLCVSSLKSNPRSSSVDTKGLANIMVGVGFANAT 78
Q+PS+ A+ +LI + C T+ LC+ +L+S+PRS+S D KGL + + A+A
Sbjct: 24 LSQRPSV--KAENHLISEICPKTRNPSLCLQALESDPRSASKDLKGLGQFSIDIAQASAK 81
Query: 79 ATSSYLSSQLLSTKTNDTTLKKVLKECADKYTYAGDSLQASGQDLATEDYDYAYLHISAA 138
TS ++S L+ + D LK + C++ Y A DSL + Q L + DY+ ++ SAA
Sbjct: 82 QTSKIIAS--LTNQATDPKLKGRYETCSENYADAIDSLGQAKQFLTSGDYNSLNIYASAA 139
Query: 139 ADYPNACHNAFRRSPGLAYPAELARREDGLKQICDVVLGIIDHIISSS 186
D C ++F P + P +L + + L+ +CD+VL +I +++ S
Sbjct: 140 FDGAGTCEDSFEGPPNI--PTQLHQADLKLEDLCDIVL-VISNLLPGS 184
>sp|Q8GT41|PLA1_PLAAC Putative invertase inhibitor OS=Platanus acerifolia PE=1 SV=1
Length = 179
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 12/157 (7%)
Query: 8 FTLFIAFHLLIFRQQPSIFAAADMNLIQKTCKNTKY------YDLCVSSLKSNPRSSSVD 61
F+L I F L+ Q I A +++Q TCK YD CV SL ++P+S + D
Sbjct: 5 FSLCIFFFNLLLLLQAVISA----DIVQGTCKKVAQRSPNVNYDFCVKSLGADPKSHTAD 60
Query: 62 TKGLANIMVGVGFANATATSSYLSSQLLSTKTNDTTLKKVLKECADKYTYAGDSLQASGQ 121
+GL I + + + +++ ++L +K D LKK L +C Y A S+Q +
Sbjct: 61 LQGLGVISANLAIQHGSKIQTFIG-RILKSKV-DPALKKYLNDCVGLYADAKSSVQEAIA 118
Query: 122 DLATEDYDYAYLHISAAADYPNACHNAFRRSPGLAYP 158
D ++DY A + +SAA D C + F+ G+ P
Sbjct: 119 DFKSKDYASANVKMSAALDDSVTCEDGFKEKKGIVSP 155
>sp|Q9LUV1|PMEI2_ARATH Pectinesterase inhibitor 2 OS=Arabidopsis thaliana GN=PMEI2 PE=1
SV=1
Length = 173
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 11/148 (7%)
Query: 34 IQKTCKNTKYYDLCVSSLKSNPRSSSVDTKGLANIMVGVGFANATATSSYLSSQLLSTKT 93
I+ C K C S +KSNP++S D + LANI G A +A+ + Q L
Sbjct: 30 IKAICGKAKNQSFCTSYMKSNPKTSGADLQTLANITFGS--AQTSASEGFRKIQSLVKTA 87
Query: 94 NDTTLKKVLKECADKYTYAGDSLQASGQDLATEDYDYAYLHISAAADYPNACHN---AFR 150
+ T+KK C Y A SL + Q LA+ D + +SAA + P+ C F+
Sbjct: 88 TNPTMKKAYTSCVQHYKSAISSLNDAKQSLASGDGKGLNIKVSAAMEGPSTCEQDMADFK 147
Query: 151 RSPGLAYPAELARREDGLKQICDVVLGI 178
P + + IC +VL I
Sbjct: 148 VDP------SAVKNSGDFQNICGIVLVI 169
>sp|F4HWQ8|CVIF1_ARATH Cell wall / vacuolar inhibitor of fructosidase 1 OS=Arabidopsis
thaliana GN=C/VIF1 PE=1 SV=1
Length = 205
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 29 ADMNLIQKTCKNTKYYDLCVSSLKSNPRSSSVDTKGLANIMVGVGFANATATSSYLSSQL 88
++ ++I+ TCK T ++LCVS L S+PR SS DT GLA I++ AT T + ++
Sbjct: 21 SEGSIIEPTCKETPDFNLCVSLLNSDPRGSSADTSGLALILIDKIKGLATKTLNEING-- 78
Query: 89 LSTKTNDTTLKKVLKECADKY 109
L K + LK+ L EC+ +Y
Sbjct: 79 LYKKRPE--LKRALDECSRRY 97
>sp|P83948|PME3_CITSI Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1
Length = 584
Score = 38.5 bits (88), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 33 LIQKTCKNTKYYDLCVSSLKSNPRSSSVDTKGLANIMVGVGFANATATSSYLSSQLLSTK 92
+++ +C +T+Y DLC S++ + P +S T I + + +Y Q L +
Sbjct: 68 ILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKR 127
Query: 93 TNDTTLKKV-LKECADKYTYAGDSLQASGQDLATEDY 128
TN T +KV L +C + D L + +DL E+Y
Sbjct: 128 TNLTKREKVALHDCLETIDETLDELHKAVEDL--EEY 162
>sp|O04886|PME1_CITSI Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1
Length = 584
Score = 38.5 bits (88), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 33 LIQKTCKNTKYYDLCVSSLKSNPRSSSVDTKGLANIMVGVGFANATATSSYLSSQLLSTK 92
+++ +C +T+Y DLC S++ + P +S T I + + +Y Q L +
Sbjct: 68 ILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKR 127
Query: 93 TNDTTLKKV-LKECADKYTYAGDSLQASGQDLATEDY 128
TN T +KV L +C + D L + +DL E+Y
Sbjct: 128 TNLTKREKVALHDCLETIDETLDELHKAVEDL--EEY 162
>sp|Q3E989|PME54_ARATH Probable pectinesterase/pectinesterase inhibitor 54 OS=Arabidopsis
thaliana GN=PME54 PE=2 SV=1
Length = 512
Score = 37.0 bits (84), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 17/159 (10%)
Query: 5 IFLFTLFIAFHLLIFRQQPSIFAAADMNLIQKTCKNTKYYDLCVSSLKSNPRSSSVDTKG 64
+ LF + + LLI A N +Q+ C +TKY LCV +L+ R S+D
Sbjct: 6 MVLFWVLLVNALLIVDASSRNMPFAYQNEMQRHCSSTKYTSLCVQNLREF-RHGSLDGLD 64
Query: 65 LANIMVGVGFANAT-----ATSSYLSSQLLSTKTNDTTL---------KKVLKECADKYT 110
+ +V +++ +SS SS+L+S + + TL ++++K +
Sbjct: 65 FVSFLVNKTISDSNLLIPPLSSSMGSSKLVSLEDSTYTLPSPSVSDSCERLMKMSTRRLR 124
Query: 111 YAGDSLQASGQDLATEDYDYAYLHISAAADYPNACHNAF 149
A ++L S + T+ +L SAA + AC ++
Sbjct: 125 QAMEALNGSSRKRHTKHDVQTWL--SAAMTFQQACKDSI 161
>sp|A5GFS8|VAPB_PIG Vesicle-associated membrane protein-associated protein B OS=Sus
scrofa GN=VAPB PE=3 SV=1
Length = 243
Score = 35.0 bits (79), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 15/111 (13%)
Query: 24 SIFAAADMNLIQKTCKNTKYYDLCVSSLK-------SNPRSSSVDTKGLANIMVGVGFAN 76
S+FA AD + ++ K K DL S L+ N + V+ + +
Sbjct: 92 SMFAPADTSDMEAAWKEAKPEDLMDSKLRCVFELPAENDKPHDVEINKIIS-------TT 144
Query: 77 ATATSSYLSSQLLSTKTNDTTLKKVLKECADKYTYAGDSLQASGQDLATED 127
A+ T + + S+ LS+ +DT +KKV++EC + L+ + L ED
Sbjct: 145 ASKTETPVVSKALSSALDDTEVKKVMEECK-RLQSEVQRLREENKQLKEED 194
>sp|Q9LUL8|PME26_ARATH Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis
thaliana GN=PME26 PE=2 SV=1
Length = 968
Score = 34.3 bits (77), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 33 LIQKTCKNTKYYDLCVSSLKSNPRS-SSVDTKGLANIMVGVGFANATATSSYLSSQLLST 91
+++ C T Y C+SS+ P S ++ D K L + + V F + + L+
Sbjct: 458 VLRTVCNVTNYPASCISSISKLPLSKTTTDPKVLFRLSLQVTFDELNSIVGL--PKKLAE 515
Query: 92 KTNDTTLKKVLKECADKYTYAGDSLQ 117
+TND LK L CAD + A DS+
Sbjct: 516 ETNDEGLKSALSVCADVFDLAVDSVN 541
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 23 PSIFAAADMNLIQKTCKNTKYYDLCVSSLKSNPRSSSVDTKGLANIMVGVGFANATATSS 82
P + AA + + C T+Y CVSS+ P S++ D + L + + V + +
Sbjct: 263 PKLTPAASL---RNVCSVTRYPASCVSSISKLPSSNTTDPEALFRLSLQVVINELNSIAG 319
Query: 83 YLSSQLLSTKTNDTTLKKVLKECADKYTYAGD 114
+ L+ +T+D LK L C D + A D
Sbjct: 320 L--PKKLAEETDDERLKSSLSVCGDVFNDAID 349
>sp|Q9HUB6|HIS2_PSEAE Phosphoribosyl-ATP pyrophosphatase OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=hisE PE=3 SV=1
Length = 111
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 76 NATATSSYLSSQLLSTKTNDTTLKKVLKECADKYTYAGDSLQASG--QDLATEDYD---Y 130
NA SSY++S L K + L+KV +E + A D+ ASG QDL E D +
Sbjct: 17 NAAPDSSYVAS--LYHKGLNKILEKVGEESVETIIAAKDA-AASGDCQDLIYETADLWFH 73
Query: 131 AYLHISAAADYPNACHNAFRRSPGLAYPAELARRE 165
+ + +SA +P A + R GL+ AE A R+
Sbjct: 74 SLVMLSALGQHPQAVLDELERRFGLSGHAEKAARQ 108
>sp|B7V3G0|HIS2_PSEA8 Phosphoribosyl-ATP pyrophosphatase OS=Pseudomonas aeruginosa
(strain LESB58) GN=hisE PE=3 SV=1
Length = 111
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 76 NATATSSYLSSQLLSTKTNDTTLKKVLKECADKYTYAGDSLQASG--QDLATEDYD---Y 130
NA SSY++S L K + L+KV +E + A D+ ASG QDL E D +
Sbjct: 17 NAAPDSSYVAS--LYHKGLNKILEKVGEESVETIIAAKDA-AASGDCQDLIYETADLWFH 73
Query: 131 AYLHISAAADYPNACHNAFRRSPGLAYPAELARRE 165
+ + +SA +P A + R GL+ AE A R+
Sbjct: 74 SLVMLSALGQHPQAVLDELERRFGLSGHAEKAARQ 108
>sp|A2VDZ9|VAPB_BOVIN Vesicle-associated membrane protein-associated protein B OS=Bos
taurus GN=VAPB PE=2 SV=1
Length = 243
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 22/114 (19%)
Query: 24 SIFAAADMNLIQKTCKNTKYYDLCVSSLK-------SNPRSSSVDTKGLANIMVGVGFAN 76
S+FA D + ++ K K DL S L+ N + V+ +
Sbjct: 92 SMFAPTDTSDMEAVWKEAKPEDLMDSKLRCVFELPAENDKPHDVEINKIIP-------TT 144
Query: 77 ATATSSYLSSQLLSTKTNDTTLKKVLKECADKYTYAGDSLQASGQDLATEDYDY 130
A+ T + S+ LS+ +DT +KKV++EC LQ+ Q L E+ +
Sbjct: 145 ASKTETPTVSKALSSSLDDTEVKKVMEECK--------RLQSEVQRLREENKQF 190
>sp|Q43867|PME1_ARATH Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1
Length = 586
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 34 IQKTCKNTKYYDLCVSSLKSNPRSSSVDTKGLANIMVGVGFANATATSSYLSSQLLSTKT 93
++ C T++ + C+SS+ P S++ D + L + + V + S + LS +T
Sbjct: 73 LKAICSVTRFPESCISSISKLPSSNTTDPETLFKLSLKVIIDELDSISDL--PEKLSKET 130
Query: 94 NDTTLKKVLKECADKYTYAGDSL 116
D +K L+ C D A D L
Sbjct: 131 EDERIKSALRVCGDLIEDALDRL 153
>sp|A5I5A3|ARLY_CLOBH Argininosuccinate lyase OS=Clostridium botulinum (strain Hall /
ATCC 3502 / NCTC 13319 / Type A) GN=argH PE=3 SV=1
Length = 440
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 47 CVSSLKSNPRSSSVDTKGLANIMVGV--GFANATATSSYLSSQLLSTKTNDTTLKKVLKE 104
+S+LK N N+M V GF NAT + YL ++ ++ + + +V+
Sbjct: 343 IISTLKVNKE----------NLMKSVKKGFLNATEAADYLVNKGMAFRDAHKVIGEVVIY 392
Query: 105 CADKYTYAGD-SLQASGQ--DLATEDYDYAYLHISAAADYPNACHNAFRRSPG 154
C DK + D SL+ Q DL ED I DY N+ + ++ G
Sbjct: 393 CEDKNSAIEDLSLEELKQFSDLFCED-------IYEFIDYKNSINKGIKKEMG 438
>sp|A7FWU5|ARLY_CLOB1 Argininosuccinate lyase OS=Clostridium botulinum (strain ATCC 19397
/ Type A) GN=argH PE=3 SV=1
Length = 440
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 47 CVSSLKSNPRSSSVDTKGLANIMVGV--GFANATATSSYLSSQLLSTKTNDTTLKKVLKE 104
+S+LK N N+M V GF NAT + YL ++ ++ + + +V+
Sbjct: 343 IISTLKVNKE----------NLMKSVKKGFLNATEAADYLVNKGMAFRDAHKVIGEVVIY 392
Query: 105 CADKYTYAGD-SLQASGQ--DLATEDYDYAYLHISAAADYPNACHNAFRRSPG 154
C DK + D SL+ Q DL ED I DY N+ + ++ G
Sbjct: 393 CEDKNSAIEDLSLEELKQFSDLFCED-------IYEFIDYKNSINKGIKKEMG 438
>sp|C1FU67|ARLY_CLOBJ Argininosuccinate lyase OS=Clostridium botulinum (strain Kyoto /
Type A2) GN=argH PE=3 SV=1
Length = 440
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 47 CVSSLKSNPRSSSVDTKGLANIMVGV--GFANATATSSYLSSQLLSTKTNDTTLKKVLKE 104
+S+LK N N+M V GF NAT + YL ++ ++ + + +V+
Sbjct: 343 IISTLKVNKE----------NLMKSVKKGFLNATEAADYLVNKGMAFRDAHKVIGEVVIY 392
Query: 105 CADKYTYAGD-SLQASGQ--DLATEDYDYAYLHISAAADYPNACHNAFRRSPG 154
C DK + D SL+ Q DL ED I DY N+ + ++ G
Sbjct: 393 CEDKNSAIEDLSLEELKQFSDLFCED-------IYEFIDYKNSINKGIKKEMG 438
>sp|C3L1U2|ARLY_CLOB6 Argininosuccinate lyase OS=Clostridium botulinum (strain 657 / Type
Ba4) GN=argH PE=3 SV=1
Length = 440
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 47 CVSSLKSNPRSSSVDTKGLANIMVGV--GFANATATSSYLSSQLLSTKTNDTTLKKVLKE 104
+S+LK N N+M V GF NAT + YL ++ ++ + + +V+
Sbjct: 343 IISTLKVNKE----------NLMKSVKKGFLNATEAADYLVNKGMAFRDAHKVIGEVVIY 392
Query: 105 CADKYTYAGD-SLQASGQ--DLATEDYDYAYLHISAAADYPNACHNAFRRSPG 154
C DK + D SL+ Q DL ED I DY N+ + ++ G
Sbjct: 393 CEDKNSAIEDLSLEELKQFSDLFCED-------IYEFIDYKNSINKGIKKEMG 438
>sp|A6VDJ0|HIS2_PSEA7 Phosphoribosyl-ATP pyrophosphatase OS=Pseudomonas aeruginosa
(strain PA7) GN=hisE PE=3 SV=1
Length = 111
Score = 30.8 bits (68), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 76 NATATSSYLSSQLLSTKTNDTTLKKVLKECADKYTYAGDSLQASG--QDLATEDYD---Y 130
NA SSY++S L K + L+KV +E + A D+ ASG Q+L E D +
Sbjct: 17 NAAPDSSYVAS--LYHKGLNKILEKVGEESVETIIAAKDA-AASGDCQELIYETADLWFH 73
Query: 131 AYLHISAAADYPNACHNAFRRSPGLAYPAELARRE 165
+ + +SA +P A + R GL+ AE A R+
Sbjct: 74 SLVMLSALGQHPQAVLDELERRFGLSGHAEKAARQ 108
>sp|Q6PLS1|POLG_ASGVK Genome polyprotein OS=Apple stem grooving virus (strain Korea) PE=3
SV=1
Length = 2105
Score = 30.8 bits (68), Expect = 5.7, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 85 SSQLLSTKTNDTTLKKVLKECADKYTYAGDSLQASGQDLAT----EDYDYAYLHI 135
S +LL + + +++LKEC D Y + G+ L T ED++Y YL I
Sbjct: 1502 SPKLLWARIKMMSERQLLKECVDNYLFEAIFAYRLGERLYTILKEEDFEYHYLVI 1556
>sp|P36309|POLG_ASGVP Genome polyprotein OS=Apple stem grooving virus (strain P-209) PE=4
SV=1
Length = 2105
Score = 30.8 bits (68), Expect = 5.9, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 85 SSQLLSTKTNDTTLKKVLKECADKYTYAGDSLQASGQDLAT----EDYDYAYLHI 135
S +LL + + +++LKEC D Y + G+ L T ED++Y YL I
Sbjct: 1502 SPKLLWARIKMMSERQLLKECVDNYLFEAIFAYRLGERLYTILKEEDFEYHYLVI 1556
>sp|P15389|SCN5A_RAT Sodium channel protein type 5 subunit alpha OS=Rattus norvegicus
GN=Scn5a PE=2 SV=1
Length = 2019
Score = 30.4 bits (67), Expect = 6.7, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 56 RSSSVDTKGLANIMVGVGFANATATSSYLSSQLLSTKTNDTT 97
R+S+VD G+ +++ G G A AT+ SYL ++ + DTT
Sbjct: 592 RNSTVDCNGVVSLL-GAGDAEATSPGSYLLRPMVLDRPPDTT 632
>sp|Q196V8|102R_IIV3 Uncharacterized protein 102R OS=Invertebrate iridescent virus 3
GN=IIV3-102R PE=4 SV=1
Length = 121
Score = 30.4 bits (67), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 40 NTKYYDLCVSS--LKSNPRSSSVDTKGLANIMVGVGFANATATSSYLSSQLLSTKTNDTT 97
N K + V + +K NP TK + +I+ GVG AN AT+ + L +T DT+
Sbjct: 48 NKKQISITVETTPVKKNPSLKEKQTK-IQDILSGVGVANPDATTQEIIDGLKTTTITDTS 106
Query: 98 LKK-VLK 103
+K VLK
Sbjct: 107 NQKDVLK 113
>sp|Q9EMI7|NMT_AMEPV Putative glycylpeptide N-tetradecanoyltransferase OS=Amsacta moorei
entomopoxvirus GN=AMV219 PE=3 SV=1
Length = 299
Score = 30.0 bits (66), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 33 LIQKTCKNTKYYDLCVSSLKSNPRSSSVDTKGLANIMVGVGFANATATSSYLSSQLLSTK 92
LI + KN K D+ ++ SN + ++V + + G N S Y + +LL+ K
Sbjct: 133 LIDEIMKNAKKNDIIIALFNSNIKFNNVKYINEYDTYITYGNKNLIKKSDYFNYELLNKK 192
Query: 93 TND 95
T D
Sbjct: 193 TQD 195
>sp|Q9SFB7|QRT2_ARATH Polygalacturonase QRT2 OS=Arabidopsis thaliana GN=QRT2 PE=1 SV=2
Length = 439
Score = 30.0 bits (66), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 28 AADMNLIQKTCKNTKYYDLCVSSLKSNPRSSSVDTKGLANIMV 70
A M+L + CKN K +L V+S +P + + G NI++
Sbjct: 214 AQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHVSGTQNILI 256
>sp|Q9SN90|SMC22_ARATH Structural maintenance of chromosomes protein 2-2 OS=Arabidopsis
thaliana GN=SMC2-2 PE=2 SV=1
Length = 1171
Score = 30.0 bits (66), Expect = 9.4, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 48 VSSLKSNPRSSSVDTKGLANIMVGVGFANATATS--SYLSSQLLSTKTNDTTL 98
+ +LK+ ++SS D KG N+ + T SYL SQL S +T +TL
Sbjct: 793 IKTLKARIQASSKDLKGHENVRERLVMEQEAVTQEQSYLKSQLTSLRTQISTL 845
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.131 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,051,034
Number of Sequences: 539616
Number of extensions: 2230012
Number of successful extensions: 5726
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 5705
Number of HSP's gapped (non-prelim): 41
length of query: 186
length of database: 191,569,459
effective HSP length: 111
effective length of query: 75
effective length of database: 131,672,083
effective search space: 9875406225
effective search space used: 9875406225
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)