Query 029894
Match_columns 186
No_of_seqs 132 out of 962
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 05:19:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029894.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029894hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01614 PME_inhib pectineste 100.0 2.9E-34 6.3E-39 217.7 19.2 153 27-182 25-177 (178)
2 smart00856 PMEI Plant invertas 100.0 1.7E-32 3.6E-37 201.9 16.5 145 31-178 4-148 (148)
3 PF04043 PMEI: Plant invertase 100.0 7.6E-31 1.7E-35 193.6 15.6 147 30-178 3-152 (152)
4 PLN02468 putative pectinestera 100.0 2.3E-29 4.9E-34 218.4 19.1 149 31-183 64-217 (565)
5 PLN02314 pectinesterase 100.0 2.4E-29 5.3E-34 219.2 19.3 153 30-184 69-235 (586)
6 PLN02484 probable pectinestera 100.0 3.1E-29 6.6E-34 218.2 19.0 153 30-184 72-228 (587)
7 PLN02313 Pectinesterase/pectin 100.0 9.6E-28 2.1E-32 209.1 19.1 154 30-184 58-221 (587)
8 PLN02416 probable pectinestera 100.0 1.7E-27 3.7E-32 205.6 18.1 182 1-184 1-193 (541)
9 PLN02708 Probable pectinestera 100.0 1.9E-27 4.2E-32 205.9 18.4 152 29-182 42-195 (553)
10 PLN02995 Probable pectinestera 100.0 2.1E-27 4.7E-32 204.9 18.1 150 32-184 35-192 (539)
11 PLN02301 pectinesterase/pectin 100.0 3.7E-27 8.1E-32 203.4 18.0 152 27-184 46-202 (548)
12 PLN02713 Probable pectinestera 100.0 3.4E-27 7.3E-32 204.7 16.1 177 1-181 1-188 (566)
13 PLN02990 Probable pectinestera 100.0 9.5E-27 2.1E-31 202.1 18.6 150 31-184 53-211 (572)
14 PLN02217 probable pectinestera 99.9 7.3E-27 1.6E-31 204.6 17.4 149 32-184 54-209 (670)
15 PLN02506 putative pectinestera 99.9 1.1E-26 2.4E-31 200.2 18.1 153 28-183 31-192 (537)
16 PLN02197 pectinesterase 99.9 1.8E-26 3.8E-31 200.4 18.2 176 1-183 1-191 (588)
17 PLN02745 Putative pectinestera 99.9 1.4E-25 3.1E-30 195.5 19.4 147 31-184 79-233 (596)
18 PLN02698 Probable pectinestera 99.9 2.4E-25 5.2E-30 190.8 16.5 151 29-184 20-178 (497)
19 PLN03043 Probable pectinestera 99.9 3.4E-24 7.4E-29 185.3 14.7 144 35-181 3-156 (538)
20 PLN02933 Probable pectinestera 99.8 1.9E-19 4.1E-24 154.8 16.6 124 59-183 48-182 (530)
21 PLN02201 probable pectinestera 99.8 9.8E-19 2.1E-23 150.4 15.8 119 62-183 37-164 (520)
22 PLN02488 probable pectinestera 99.8 8.4E-18 1.8E-22 143.3 13.1 143 36-183 3-160 (509)
23 PLN02170 probable pectinestera 99.7 2.1E-16 4.5E-21 135.8 10.6 126 42-183 58-185 (529)
24 PLN02916 pectinesterase family 99.5 1.1E-13 2.4E-18 118.5 9.9 87 92-183 55-141 (502)
25 PF07172 GRP: Glycine rich pro 93.7 0.07 1.5E-06 36.2 2.8 20 1-20 1-20 (95)
26 PF10731 Anophelin: Thrombin i 84.4 1.2 2.6E-05 27.3 2.6 31 1-32 1-31 (65)
27 TIGR00208 fliS flagellar biosy 67.9 40 0.00087 23.8 8.0 36 107-142 26-61 (124)
28 PF08285 DPM3: Dolichol-phosph 64.1 3.8 8.2E-05 27.5 1.1 28 100-127 61-88 (91)
29 KOG1733 Mitochondrial import i 63.0 43 0.00094 22.4 7.5 53 68-120 26-84 (97)
30 PF02561 FliS: Flagellar prote 61.8 52 0.0011 22.9 7.5 32 107-138 24-55 (122)
31 PRK05685 fliS flagellar protei 59.8 61 0.0013 23.1 8.0 34 106-139 29-62 (132)
32 KOG4841 Dolichol-phosphate man 59.0 7.4 0.00016 25.7 1.7 27 100-126 65-91 (95)
33 COG1516 FliS Flagellin-specifi 43.0 1.3E+02 0.0027 21.7 6.2 35 106-140 25-59 (132)
34 PF07870 DUF1657: Protein of u 42.4 71 0.0015 18.7 6.4 26 92-117 22-47 (50)
35 PF02953 zf-Tim10_DDP: Tim10/D 38.9 91 0.002 19.0 4.9 29 93-121 36-64 (66)
36 PF02609 Exonuc_VII_S: Exonucl 35.0 73 0.0016 18.7 3.4 42 109-150 1-44 (53)
37 PF02203 TarH: Tar ligand bind 32.2 1.9E+02 0.0041 20.7 8.7 60 73-133 87-147 (171)
38 PRK09634 nusB transcription an 31.5 1.2E+02 0.0027 23.5 4.9 93 60-152 28-137 (207)
39 PF00737 PsbH: Photosystem II 29.6 45 0.00098 19.8 1.7 20 1-20 28-47 (52)
40 PF14346 DUF4398: Domain of un 29.4 1.3E+02 0.0028 20.1 4.3 35 108-142 41-75 (103)
41 TIGR01601 PYST-C1 Plasmodium y 28.8 22 0.00047 23.1 0.3 23 1-23 1-23 (82)
42 TIGR01280 xseB exodeoxyribonuc 28.0 1.3E+02 0.0028 18.8 3.8 44 109-152 3-48 (67)
43 PF01540 Lipoprotein_7: Adhesi 27.3 2.4E+02 0.0052 23.0 5.9 27 125-151 85-111 (353)
44 PF05984 Cytomega_UL20A: Cytom 25.5 86 0.0019 20.7 2.6 24 1-25 1-24 (100)
45 PF04108 APG17: Autophagy prot 25.2 3.9E+02 0.0084 23.0 7.4 21 33-53 208-228 (412)
46 PLN00055 photosystem II reacti 24.5 56 0.0012 20.9 1.6 21 1-21 43-63 (73)
47 PF08287 DASH_Spc19: Spc19; I 23.5 1.7E+02 0.0036 21.6 4.2 25 102-126 2-26 (153)
48 CHL00066 psbH photosystem II p 23.5 61 0.0013 20.7 1.6 21 1-21 43-63 (73)
49 PRK00977 exodeoxyribonuclease 22.9 1.7E+02 0.0038 18.9 3.8 45 108-152 11-57 (80)
50 cd02337 ZZ_CBP Zinc finger, ZZ 21.8 67 0.0015 18.0 1.4 22 34-55 12-33 (41)
51 PF03058 Sar8_2: Sar8.2 family 21.6 1E+02 0.0022 20.6 2.5 23 1-23 1-23 (93)
52 TIGR03504 FimV_Cterm FimV C-te 21.6 1.4E+02 0.0031 16.9 2.8 25 116-140 3-27 (44)
53 PRK14066 exodeoxyribonuclease 20.7 2.1E+02 0.0046 18.3 3.8 44 108-151 5-50 (75)
54 COG1722 XseB Exonuclease VII s 20.4 2.4E+02 0.0052 18.4 4.0 45 108-152 11-57 (81)
55 PRK14064 exodeoxyribonuclease 20.1 2.2E+02 0.0048 18.2 3.8 45 108-152 7-53 (75)
No 1
>TIGR01614 PME_inhib pectinesterase inhibitor domain. This model describes a plant domain of about 200 amino acids, characterized by four conserved Cys residues, shown in a pectinesterase inhibitor from Kiwi to form two disulfide bonds: first to second and third to fourth. Roughly half the members of this family have the region described by this model followed immediately by a pectinesterase domain, pfam01095. This suggests that the pairing of the enzymatic domain and its inhibitor reflects a conserved regulatory mechanism for this enzyme family.
Probab=100.00 E-value=2.9e-34 Score=217.70 Aligned_cols=153 Identities=34% Similarity=0.576 Sum_probs=142.3
Q ss_pred cccchHHHHHHhccCCCccchHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHH
Q 029894 27 AAADMNLIQKTCKNTKYYDLCVSSLKSNPRSSSVDTKGLANIMVGVGFANATATSSYLSSQLLSTKTNDTTLKKVLKECA 106 (186)
Q Consensus 27 ~~~~~~~i~~~C~~T~~~~~C~~~L~s~p~s~~~d~~~la~~ai~~a~~~a~~~~~~i~~~l~~~~~~~~~~~~al~~C~ 106 (186)
.......|+++|++|+||++|+++|.++|++..+|+++|+.++++.+..+++.+..++.+ +.+. .+++..+.++++|.
T Consensus 25 ~~~~~~~i~~~C~~t~~~~~C~~~L~~~~~~~~ad~~~la~~ai~~a~~~~~~~~~~i~~-l~~~-~~~~~~~~al~~C~ 102 (178)
T TIGR01614 25 LNATQSLIKRICKKTEYPNFCISTLKSDPSSAKADLQGLANISVSAALSNASDTLDHISK-LLLT-KGDPRDKSALEDCV 102 (178)
T ss_pred CcchHHHHHHHHcCCCChHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHcc-CCCHHHHHHHHHHH
Confidence 446678999999999999999999999999888899999999999999999999999998 8743 44788999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCHHHHHHHHHHhccChhhHHHhhcCCCCCCchhhHHhhhHHHHHHHHHHHHHHHHh
Q 029894 107 DKYTYAGDSLQASGQDLATEDYDYAYLHISAAADYPNACHNAFRRSPGLAYPAELARREDGLKQICDVVLGIIDHI 182 (186)
Q Consensus 107 ~~y~~a~~~L~~a~~~l~~~~~~~a~~~lsaa~~~~~tC~d~f~~~~~~~~~~~l~~~~~~~~~l~sialaii~~l 182 (186)
++|++++++|+++.+.+..++|+++++|+++|++++++|+|+|.+.++ ..++|+..+++++.+|++|+++|++++
T Consensus 103 ~~y~~a~~~L~~a~~~l~~~~~~d~~~~ls~a~~~~~tC~d~f~~~~~-~~~~~l~~~~~~~~~l~s~alai~~~~ 177 (178)
T TIGR01614 103 ELYSDAVDALDKALASLKSKDYSDAETWLSSALTDPSTCEDGFEELGG-IVKSPLTKRNNNVKKLSSITLAIIKML 177 (178)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHcccchHHHHhccCCC-CccchHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999998764 468899999999999999999999986
No 2
>smart00856 PMEI Plant invertase/pectin methylesterase inhibitor. This domain inhibits pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex PUBMED:8521860. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein PUBMED:8521860. It is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical PUBMED:10880981.
Probab=100.00 E-value=1.7e-32 Score=201.91 Aligned_cols=145 Identities=40% Similarity=0.612 Sum_probs=136.0
Q ss_pred hHHHHHHhccCCCccchHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHHH
Q 029894 31 MNLIQKTCKNTKYYDLCVSSLKSNPRSSSVDTKGLANIMVGVGFANATATSSYLSSQLLSTKTNDTTLKKVLKECADKYT 110 (186)
Q Consensus 31 ~~~i~~~C~~T~~~~~C~~~L~s~p~s~~~d~~~la~~ai~~a~~~a~~~~~~i~~~l~~~~~~~~~~~~al~~C~~~y~ 110 (186)
..+|+.+|++|+||++|+++|.++|++..+|+.+|++++++.+.++++.+..++.+ +.+ +..+|..+.+|++|.++|+
T Consensus 4 ~~~i~~~C~~T~~~~~C~~~L~~~~~~~~~d~~~l~~~ai~~~~~~a~~~~~~~~~-l~~-~~~~~~~~~al~~C~~~y~ 81 (148)
T smart00856 4 SKLIDSICKSTDYPDFCVSSLSSDPSSSATDPKDLAKIAIKVALSQATKTLSFISS-LLK-KTKDPRLKAALKDCLELYD 81 (148)
T ss_pred HHHHHHHhcCCCChHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHh-cCCCHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999888899999999999999999999999998 874 5678899999999999999
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHhccChhhHHHhhcCCCCCCchhhHHhhhHHHHHHHHHHHHH
Q 029894 111 YAGDSLQASGQDLATEDYDYAYLHISAAADYPNACHNAFRRSPGLAYPAELARREDGLKQICDVVLGI 178 (186)
Q Consensus 111 ~a~~~L~~a~~~l~~~~~~~a~~~lsaa~~~~~tC~d~f~~~~~~~~~~~l~~~~~~~~~l~sialai 178 (186)
.++++|++++..+..++|+++++|+|+|++++++|+|||.+.++ .+++++..++.++.+|++|+|+|
T Consensus 82 ~a~~~L~~a~~~l~~~~~~d~~~~lsaa~t~~~tC~d~f~~~~~-~~~~~l~~~~~~~~~l~s~aLai 148 (148)
T smart00856 82 DAVDSLEKALEELKSGDYDDVATWLSAALTDQDTCLDGFEENDD-KVKSPLTKRNDNLEKLTSNALAI 148 (148)
T ss_pred HHHHHHHHHHHHHHhcchhHHHHHHHHHhcCcchHHhHhccCCc-chhHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999987543 57899999999999999999986
No 3
>PF04043 PMEI: Plant invertase/pectin methylesterase inhibitor; InterPro: IPR006501 This entry represents a plant domain of about 200 amino acids, characterised by four conserved cysteine residues. This domain inhibits pectinesterase/pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex []. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein []. This domain is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical in structure [].; GO: 0004857 enzyme inhibitor activity, 0030599 pectinesterase activity; PDB: 1X90_A 1X8Z_C 1X91_A 1XG2_B 1RJ4_D 2CJ4_B 2XQR_F 2CJ7_A 2CJ8_A 2CJ6_A ....
Probab=99.97 E-value=7.6e-31 Score=193.57 Aligned_cols=147 Identities=36% Similarity=0.572 Sum_probs=128.8
Q ss_pred chHHHHHHhccCCCcc-chHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHH
Q 029894 30 DMNLIQKTCKNTKYYD-LCVSSLKSNPRSSSVDTKGLANIMVGVGFANATATSSYLSSQLLSTKTNDTTLKKVLKECADK 108 (186)
Q Consensus 30 ~~~~i~~~C~~T~~~~-~C~~~L~s~p~s~~~d~~~la~~ai~~a~~~a~~~~~~i~~~l~~~~~~~~~~~~al~~C~~~ 108 (186)
....|+++|++|+||. +|+++|+++|.++..|+++|+.++|+++..++..+..++.+ +.+.++.+|..+.+|++|.++
T Consensus 3 ~~~~I~~~C~~T~~~~~~C~~~L~~~~~~~~~d~~~l~~~av~~a~~~~~~a~~~~~~-l~~~~~~~~~~~~~l~~C~~~ 81 (152)
T PF04043_consen 3 TSSLIQDICKSTPYPYNLCLSTLSSDPSSSAADPKELARIAVQAALSNATSASAFISK-LLKNPSKDPNAKQALQDCQEL 81 (152)
T ss_dssp -HHHHHHHHCTSS--HHHHHHHHHTCCCGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTC-S-THHHHHHHHHHHHH
T ss_pred hHHHHHHHhhCCCCCcHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhccCCHHhhHHHHHHHHH
Confidence 4578999999999766 99999999987777899999999999999999999999987 875547899999999999999
Q ss_pred HHHHHHHHHHHHHHh--ccCCHHHHHHHHHHhccChhhHHHhhcCCCCCCchhhHHhhhHHHHHHHHHHHHH
Q 029894 109 YTYAGDSLQASGQDL--ATEDYDYAYLHISAAADYPNACHNAFRRSPGLAYPAELARREDGLKQICDVVLGI 178 (186)
Q Consensus 109 y~~a~~~L~~a~~~l--~~~~~~~a~~~lsaa~~~~~tC~d~f~~~~~~~~~~~l~~~~~~~~~l~sialai 178 (186)
|+.++++|+++++.+ ..++|+++++|+++|++++++|+++|....+ +.++||..++.++.+|++|+|+|
T Consensus 82 y~~a~~~l~~a~~~l~~~~~~~~~~~~~lsaa~~~~~tC~~~f~~~~~-~~~~~l~~~~~~~~~l~s~aLai 152 (152)
T PF04043_consen 82 YDDAVDSLQRALEALNSKNGDYDDARTWLSAALTNQDTCEDGFEEAGS-PVKSPLVQRNDNVEKLSSNALAI 152 (152)
T ss_dssp HHHHHHHHHHHHHHH--HHT-HHHHHHHHHHHHHHHHHHHHHC-TTSS-S--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHhcccCC-CccchHHHHHHHHHHHHHHHhhC
Confidence 999999999999999 9999999999999999999999999953222 46899999999999999999997
No 4
>PLN02468 putative pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=2.3e-29 Score=218.39 Aligned_cols=149 Identities=19% Similarity=0.264 Sum_probs=133.3
Q ss_pred hHHHHHHhccCCCccchHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCChhHHHHHHHHHHHH
Q 029894 31 MNLIQKTCKNTKYYDLCVSSLKSNPRSSSVDTKGLANIMVGVGFANATATSSYLSSQLLSTK-TNDTTLKKVLKECADKY 109 (186)
Q Consensus 31 ~~~i~~~C~~T~~~~~C~~~L~s~p~s~~~d~~~la~~ai~~a~~~a~~~~~~i~~~l~~~~-~~~~~~~~al~~C~~~y 109 (186)
...|+..|+.|.||++|+++|.++|.+...++++|++++++++++++..+...+.+ +.... ..++..+.||+||.++|
T Consensus 64 ~~~Ik~~C~~T~Yp~lC~sSLs~~~~s~~~~p~~L~~~al~vti~~~~~a~~~~s~-l~~~~~~~d~~~k~AL~DC~ELl 142 (565)
T PLN02468 64 STSVKAVCDVTLYKDSCYETLAPAPKASQLQPEELFKYAVKVAINELSKASQAFSN-SEGFLGVKDNMTNAALNACQELL 142 (565)
T ss_pred hHHHHHhccCCCChHHHHHHHhhcCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhcccCChHHHHHHHHHHHHH
Confidence 45899999999999999999999998777899999999999999999999888776 64322 45788999999999999
Q ss_pred HHHHHHHHHHHHHhc----cCCHHHHHHHHHHhccChhhHHHhhcCCCCCCchhhHHhhhHHHHHHHHHHHHHHHHhh
Q 029894 110 TYAGDSLQASGQDLA----TEDYDYAYLHISAAADYPNACHNAFRRSPGLAYPAELARREDGLKQICDVVLGIIDHII 183 (186)
Q Consensus 110 ~~a~~~L~~a~~~l~----~~~~~~a~~~lsaa~~~~~tC~d~f~~~~~~~~~~~l~~~~~~~~~l~sialaii~~l~ 183 (186)
++++++|++++.++. ...++|+++|||+|++|++||+|||++. .++++|...+.++.+|++|+|||++.+.
T Consensus 143 ddaid~L~~Sl~~l~~~~~~~~~dDl~TWLSAAlTnq~TClDGF~e~---~vk~~~~~~l~n~~eLtSNaLAIi~~l~ 217 (565)
T PLN02468 143 DLAIDNLNNSLTSSGGVSVLDNVDDLRTWLSSAGTYQETCIDGLAEP---NLKSFGENHLKNSTELTSNSLAIITWIG 217 (565)
T ss_pred HHHHHHHHHHHHHHhccccccchHHHHHHHHHHhcchhhhhhhhccc---CchHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999886 3457999999999999999999999864 3688999999999999999999999854
No 5
>PLN02314 pectinesterase
Probab=99.97 E-value=2.4e-29 Score=219.17 Aligned_cols=153 Identities=22% Similarity=0.343 Sum_probs=134.6
Q ss_pred chHHHHHHhccCCCccchHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHH
Q 029894 30 DMNLIQKTCKNTKYYDLCVSSLKSNPRSSSVDTKGLANIMVGVGFANATATSSYLSSQLLSTKTNDTTLKKVLKECADKY 109 (186)
Q Consensus 30 ~~~~i~~~C~~T~~~~~C~~~L~s~p~s~~~d~~~la~~ai~~a~~~a~~~~~~i~~~l~~~~~~~~~~~~al~~C~~~y 109 (186)
....|+.+|+.|+||++|+++|.+.|.+..+++++|+++++++++++++.+...+++ +.. ...++..+.||+||.++|
T Consensus 69 ~~~~Iks~C~~T~YP~lC~sSLs~~p~s~~~~p~~L~~~al~vti~~a~~a~~~~~~-L~~-~~~~~~~k~AL~DC~Ell 146 (586)
T PLN02314 69 PATSLKAVCSVTRYPESCISSISSLPTSNTTDPETLFKLSLKVAIDELSKLSDLPQK-LIN-ETNDERLKSALRVCETLF 146 (586)
T ss_pred HHHHHHHhccCCCChHHHHHHHhcccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHh-ccCCHHHHHHHHHHHHHH
Confidence 346899999999999999999999998877899999999999999999999999987 764 357889999999999999
Q ss_pred HHHHHHHHHHHHHhcc---------CCHHHHHHHHHHhccChhhHHHhhcCCC-----CCCchhhHHhhhHHHHHHHHHH
Q 029894 110 TYAGDSLQASGQDLAT---------EDYDYAYLHISAAADYPNACHNAFRRSP-----GLAYPAELARREDGLKQICDVV 175 (186)
Q Consensus 110 ~~a~~~L~~a~~~l~~---------~~~~~a~~~lsaa~~~~~tC~d~f~~~~-----~~~~~~~l~~~~~~~~~l~sia 175 (186)
++++++|++++.+|.. ..++|+++|||+|+++++||+|||++.+ ++.++..+.....++.+|++|+
T Consensus 147 ddAid~L~~Sl~~l~~~~~~~~~~~~~~~Dv~TWLSAALT~q~TClDGF~e~~~~k~~~s~vk~~~~~~l~n~~eLtSNa 226 (586)
T PLN02314 147 DDAIDRLNDSISSMQVGEGEKILSSSKIDDLKTWLSATITDQETCIDALQELSQNKYANSTLTNEVKTAMSNSTEFTSNS 226 (586)
T ss_pred HHHHHHHHHHHHHHhhcccccccccccHHHHHhHHHHHhcCHhHHHHhhhccccccccchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998843 3468999999999999999999998652 2245667777789999999999
Q ss_pred HHHHHHhhc
Q 029894 176 LGIIDHIIS 184 (186)
Q Consensus 176 laii~~l~~ 184 (186)
|||++.+..
T Consensus 227 LAIi~~l~~ 235 (586)
T PLN02314 227 LAIVSKILG 235 (586)
T ss_pred HHHHhhhcc
Confidence 999998654
No 6
>PLN02484 probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=3.1e-29 Score=218.19 Aligned_cols=153 Identities=18% Similarity=0.246 Sum_probs=135.1
Q ss_pred chHHHHHHhccCCCccchHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHH
Q 029894 30 DMNLIQKTCKNTKYYDLCVSSLKSNPRSSSVDTKGLANIMVGVGFANATATSSYLSSQLLSTKTNDTTLKKVLKECADKY 109 (186)
Q Consensus 30 ~~~~i~~~C~~T~~~~~C~~~L~s~p~s~~~d~~~la~~ai~~a~~~a~~~~~~i~~~l~~~~~~~~~~~~al~~C~~~y 109 (186)
....|+.+|+.|+||++|+++|.+.|.+..+++++|++++++++++++..+...... +. .+..++..+.||+||.|+|
T Consensus 72 ~~~~Iks~C~~T~YP~lC~sSLs~~p~s~~~~p~~L~~~slnvtl~~~~~a~~~s~~-l~-~~~~~~r~k~AL~DClELl 149 (587)
T PLN02484 72 PTQAISKTCSKTRFPNLCVDSLLDFPGSLTASESDLIHISFNMTLQHFSKALYLSST-IS-YVQMPPRVRSAYDSCLELL 149 (587)
T ss_pred hhHHHHHhccCCCChHHHHHHHhhccccccCCHHHHHHHHHHHHHHHHHHHHHHHHh-hh-hccCCHHHHHHHHHHHHHH
Confidence 345899999999999999999999998777899999999999999999988766554 43 3456888999999999999
Q ss_pred HHHHHHHHHHHHHhcc----CCHHHHHHHHHHhccChhhHHHhhcCCCCCCchhhHHhhhHHHHHHHHHHHHHHHHhhc
Q 029894 110 TYAGDSLQASGQDLAT----EDYDYAYLHISAAADYPNACHNAFRRSPGLAYPAELARREDGLKQICDVVLGIIDHIIS 184 (186)
Q Consensus 110 ~~a~~~L~~a~~~l~~----~~~~~a~~~lsaa~~~~~tC~d~f~~~~~~~~~~~l~~~~~~~~~l~sialaii~~l~~ 184 (186)
++++++|++++..+.. ..++|+++|||+|++|++||+|||++.+++.++++|...+.++.+|++|+|||++.+..
T Consensus 150 ddAid~L~~Sl~~l~~~~~~~~~~DvkTWLSAALTnq~TClDGF~e~~~~~vk~~m~~~l~~l~~LtSNALAIi~~~~~ 228 (587)
T PLN02484 150 DDSVDALSRALSSVVPSSGGGSPQDVVTWLSAALTNHDTCTEGFDGVNGGEVKDQMTGALKDLSELVSNCLAIFSASNG 228 (587)
T ss_pred HHHHHHHHHHHHHHhccccccchHHHHhHHHHHhccHhhHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 9999999999999874 35799999999999999999999987643357899999999999999999999998654
No 7
>PLN02313 Pectinesterase/pectinesterase inhibitor
Probab=99.96 E-value=9.6e-28 Score=209.07 Aligned_cols=154 Identities=16% Similarity=0.267 Sum_probs=134.6
Q ss_pred chHHHHHHhccCCCccchHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCChhHHHHHHHHHHH
Q 029894 30 DMNLIQKTCKNTKYYDLCVSSLKSNPRSSSVDTKGLANIMVGVGFANATATSSYLSSQLLST-KTNDTTLKKVLKECADK 108 (186)
Q Consensus 30 ~~~~i~~~C~~T~~~~~C~~~L~s~p~s~~~d~~~la~~ai~~a~~~a~~~~~~i~~~l~~~-~~~~~~~~~al~~C~~~ 108 (186)
....|+.+|+.|+||++|+++|.+.|.+...++++|++++++++++++..+...+.+ +.+. +..++..+.||+||.|+
T Consensus 58 ~~~~Iks~C~~T~YP~~C~ssLs~~~~~~~~~~~~Li~~sL~vtl~~a~~a~~~vs~-L~~~~~~l~~r~k~AL~DClEL 136 (587)
T PLN02313 58 SHAVLKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKK-LIAKRKGLTPREVTALHDCLET 136 (587)
T ss_pred HhHHHHHhccCCCChHHHHHHHhccCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcccCCHHHHHHHHHHHHH
Confidence 345899999999999999999999887766799999999999999999999999987 7643 25678889999999999
Q ss_pred HHHHHHHHHHHHHHhcc--------CCHHHHHHHHHHhccChhhHHHhhcCCC-CCCchhhHHhhhHHHHHHHHHHHHHH
Q 029894 109 YTYAGDSLQASGQDLAT--------EDYDYAYLHISAAADYPNACHNAFRRSP-GLAYPAELARREDGLKQICDVVLGII 179 (186)
Q Consensus 109 y~~a~~~L~~a~~~l~~--------~~~~~a~~~lsaa~~~~~tC~d~f~~~~-~~~~~~~l~~~~~~~~~l~sialaii 179 (186)
|++++++|++++..+.. ..++|+++|||+|++|++||.|||++.. +..+++.|.....++.+|++|+|||+
T Consensus 137 lddavD~L~~Sl~~l~~~~~~~~~~~~~dDlqTWLSAALTnq~TClDGF~~~~~~~~vk~~m~~~l~n~teLtSNALAIv 216 (587)
T PLN02313 137 IDETLDELHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMI 216 (587)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHhcchhhHHHhhhccCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998863 2358999999999999999999997532 22578889999999999999999999
Q ss_pred HHhhc
Q 029894 180 DHIIS 184 (186)
Q Consensus 180 ~~l~~ 184 (186)
+.+..
T Consensus 217 ~~~~~ 221 (587)
T PLN02313 217 KNMTE 221 (587)
T ss_pred hcccc
Confidence 88653
No 8
>PLN02416 probable pectinesterase/pectinesterase inhibitor
Probab=99.96 E-value=1.7e-27 Score=205.63 Aligned_cols=182 Identities=18% Similarity=0.210 Sum_probs=141.0
Q ss_pred CCchhHHHHHHHHHHHHHHhhCc-----c--cccccchHHHHHHhccCCCccchHHhhccCCCCC-CCCHHHHHHHHHHH
Q 029894 1 MGSSIFLFTLFIAFHLLIFRQQP-----S--IFAAADMNLIQKTCKNTKYYDLCVSSLKSNPRSS-SVDTKGLANIMVGV 72 (186)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~i~~~C~~T~~~~~C~~~L~s~p~s~-~~d~~~la~~ai~~ 72 (186)
|+=++.-++|++|.+.-+|.++. | .......+.|+..|+.|+||++|+++|.+++... +.++.+++.++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Iks~C~~T~YP~lC~~sLss~~~~~~s~~~~~ll~~sL~~ 80 (541)
T PLN02416 1 MAFSSLNLLLFLLFFSPFFFSSAWYSNASYTTSLDPHLSSLTSFCKSTPYPDACFDSLKLSISINISPNILNFLLQTLQT 80 (541)
T ss_pred CchhHHHHHHHHHHcchhhccchhhcccccccCCchHHHHHHHhcCCCCChHHHHHHHhhcccccCCCCHHHHHHHHHHH
Confidence 55444445545444433333332 1 1122345689999999999999999999987543 34677899999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCHHHHHHHHHHhccChhhHHHhh
Q 029894 73 GFANATATSSYLSSQLLSTKTNDTTLKKVLKECADKYTYAGDSLQASGQDLAT---EDYDYAYLHISAAADYPNACHNAF 149 (186)
Q Consensus 73 a~~~a~~~~~~i~~~l~~~~~~~~~~~~al~~C~~~y~~a~~~L~~a~~~l~~---~~~~~a~~~lsaa~~~~~tC~d~f 149 (186)
+...+..+...+.. +......++..+.||+||.|+|++++++|++++.+|+. ..++|+++|||+|+++++||+|||
T Consensus 81 A~~~~~~~s~l~s~-~~~~~~~~~~~k~AL~DC~El~~dAvD~L~~Sl~~L~~~~~~~~~DvqTWLSAALT~q~TC~DGF 159 (541)
T PLN02416 81 AISEAGKLTNLLSG-AGQSSNIIEKQRGTIQDCKELHQITVSSLKRSVSRIQAGDSRKLADARAYLSAALTNKNTCLEGL 159 (541)
T ss_pred HHHHHHHHHHHHHh-hhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHHHHHhcchhhHHhhh
Confidence 98888888776665 43223346788999999999999999999999999975 346899999999999999999999
Q ss_pred cCCCCCCchhhHHhhhHHHHHHHHHHHHHHHHhhc
Q 029894 150 RRSPGLAYPAELARREDGLKQICDVVLGIIDHIIS 184 (186)
Q Consensus 150 ~~~~~~~~~~~l~~~~~~~~~l~sialaii~~l~~ 184 (186)
++.++ .+++++..+..++.++++|+|||++.+.+
T Consensus 160 ~~~~~-~~~~~i~~~~~~v~qltSNALAlv~~~~~ 193 (541)
T PLN02416 160 DSASG-PLKPKLVNSFTSTYKHVSNSLSMLPKSRR 193 (541)
T ss_pred hhcCc-chhhHHHHHHHHHHHHHHHHHHHhccccc
Confidence 87644 46889999999999999999999987653
No 9
>PLN02708 Probable pectinesterase/pectinesterase inhibitor
Probab=99.96 E-value=1.9e-27 Score=205.94 Aligned_cols=152 Identities=18% Similarity=0.255 Sum_probs=129.2
Q ss_pred cchHHHHHHhccCCCccchHHhhccCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHH
Q 029894 29 ADMNLIQKTCKNTKYYDLCVSSLKSNPR-SSSVDTKGLANIMVGVGFANATATSSYLSSQLLSTKTNDTTLKKVLKECAD 107 (186)
Q Consensus 29 ~~~~~i~~~C~~T~~~~~C~~~L~s~p~-s~~~d~~~la~~ai~~a~~~a~~~~~~i~~~l~~~~~~~~~~~~al~~C~~ 107 (186)
+.+..|+..|+.|+||++|+++|.++|. +...++.+|++.+|+++++++..+...+.. +.+.+..+.....|++||.|
T Consensus 42 ~~~~~I~s~C~~T~YP~lC~sSLs~~~~~~~~~~p~~Li~aAL~vsl~~a~~a~~~v~~-L~~~~~~~~~~~~AL~DC~E 120 (553)
T PLN02708 42 STPPQILLACNATRFPDTCVSSLSNAGRVPPDPKPIQIIQSAISVSRENLKTAQSMVKS-ILDSSAGNVNRTTAATNCLE 120 (553)
T ss_pred CccHHHHHhccCCCCcHHHHHHHhhccCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhccCCchHHHHHHHHHH
Confidence 4567899999999999999999999885 344689999999999999999999999987 76433223334589999999
Q ss_pred HHHHHHHHHHHHHHHhccCCHHHHHHHHHHhccChhhHHHhhcCCCC-CCchhhHHhhhHHHHHHHHHHHHHHHHh
Q 029894 108 KYTYAGDSLQASGQDLATEDYDYAYLHISAAADYPNACHNAFRRSPG-LAYPAELARREDGLKQICDVVLGIIDHI 182 (186)
Q Consensus 108 ~y~~a~~~L~~a~~~l~~~~~~~a~~~lsaa~~~~~tC~d~f~~~~~-~~~~~~l~~~~~~~~~l~sialaii~~l 182 (186)
+|++++++|++++..+....++|+++|||+|++|++||.|||.+.+. ..++..+ ...+++.+|++|+|||++.+
T Consensus 121 Llddavd~L~~Sl~~L~~~~~~DvqTWLSAALTnq~TClDGF~~~~~~~~v~~~~-~~L~nvs~LtSNSLAmv~~~ 195 (553)
T PLN02708 121 VLSNSEHRISSTDIALPRGKIKDARAWMSAALLYQYDCWSALKYVNDTSQVNDTM-SFLDSLIGLTSNALSMMASY 195 (553)
T ss_pred HHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhccHhHHHHHhhccCccchHHHHH-HHHHHHHHHHHHHHHhhhcc
Confidence 99999999999999998888999999999999999999999986532 2344444 67889999999999999974
No 10
>PLN02995 Probable pectinesterase/pectinesterase inhibitor
Probab=99.95 E-value=2.1e-27 Score=204.93 Aligned_cols=150 Identities=15% Similarity=0.195 Sum_probs=125.4
Q ss_pred HHHHHHhccCCCccchHHhhccCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHHH
Q 029894 32 NLIQKTCKNTKYYDLCVSSLKSNPRSSS-VDTKGLANIMVGVGFANATATSSYLSSQLLSTKTNDTTLKKVLKECADKYT 110 (186)
Q Consensus 32 ~~i~~~C~~T~~~~~C~~~L~s~p~s~~-~d~~~la~~ai~~a~~~a~~~~~~i~~~l~~~~~~~~~~~~al~~C~~~y~ 110 (186)
..|+..|..|.||++|+++|.+.|.+.. .++.+++++++++++.++.++...+.. +.+ ...++..+.|++||.|+|+
T Consensus 35 ~~Irs~C~~T~YP~lC~sSLs~~~~s~s~~~~~~l~~~~~~aAl~~a~sa~~~i~~-l~~-~~~~~r~~~AL~DC~ELl~ 112 (539)
T PLN02995 35 TDIDGWCDKTPYPDPCKCYFKNHNGFRQPTQISEFRVMLVEAAMDRAISARDELTN-SGK-NCTDFKKQAVLADCIDLYG 112 (539)
T ss_pred HHHHhhcCCCCChHHHHHHHhhccccccccCccHHHHHHHHHHHHHHHHHHHHHHH-Hhh-ccCCHHHHHHHHHHHHHHH
Confidence 4899999999999999999999987644 489999999999999999999999987 753 3467888999999999999
Q ss_pred HHHHHHHHHHHHhccC-------CHHHHHHHHHHhccChhhHHHhhcCCCCCCchhhHHhhhHHHHHHHHHHHHHHHHhh
Q 029894 111 YAGDSLQASGQDLATE-------DYDYAYLHISAAADYPNACHNAFRRSPGLAYPAELARREDGLKQICDVVLGIIDHII 183 (186)
Q Consensus 111 ~a~~~L~~a~~~l~~~-------~~~~a~~~lsaa~~~~~tC~d~f~~~~~~~~~~~l~~~~~~~~~l~sialaii~~l~ 183 (186)
+++++|++++++++.. .++|+++|||+|+++++||+|||++.+.....++... +.++.+|++|+|+|++.+.
T Consensus 113 DAvD~L~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALT~q~TC~DGF~~~~~~~~v~~~v~-~~~~~~ltSNaLAi~~~l~ 191 (539)
T PLN02995 113 DTIMQLNRTLQGVSPKAGAAKRCTDFDAQTWLSTALTNTETCRRGSSDLNVSDFITPIVS-NTKISHLISNCLAVNGALL 191 (539)
T ss_pred HHHHHHHHHHHHHhhccccccccchhhHHHHHHHHhcchhhhhhhhccccchhhhhhhhh-hhhHHHHHHHHHHHhhhhc
Confidence 9999999999998632 4679999999999999999999987531111222322 3679999999999999875
Q ss_pred c
Q 029894 184 S 184 (186)
Q Consensus 184 ~ 184 (186)
+
T Consensus 192 ~ 192 (539)
T PLN02995 192 T 192 (539)
T ss_pred c
Confidence 3
No 11
>PLN02301 pectinesterase/pectinesterase inhibitor
Probab=99.95 E-value=3.7e-27 Score=203.38 Aligned_cols=152 Identities=14% Similarity=0.214 Sum_probs=133.6
Q ss_pred cccchHHHHHHhccCCCccchHHhhccCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHH
Q 029894 27 AAADMNLIQKTCKNTKYYDLCVSSLKSNPRS--SSVDTKGLANIMVGVGFANATATSSYLSSQLLSTKTNDTTLKKVLKE 104 (186)
Q Consensus 27 ~~~~~~~i~~~C~~T~~~~~C~~~L~s~p~s--~~~d~~~la~~ai~~a~~~a~~~~~~i~~~l~~~~~~~~~~~~al~~ 104 (186)
...+...|+..|+.|+||++|+++|.+.+.+ ...++.+|++.+|+++++++..+...+.+ +. .+..++..+.|++|
T Consensus 46 ~~~~~~~Iks~C~~T~YP~~C~ssLs~~a~~~~~~~~p~~L~~aaL~vsl~~a~~a~~~vs~-l~-~~~~~~~~~aAL~D 123 (548)
T PLN02301 46 SSSPPSLLQTLCDRAHDQDSCQAMVSEIATNTVMKLNRVDLLQVLLKESTPHLQNTIEMASE-IR-IRINDPRDKAALAD 123 (548)
T ss_pred CCCchHHHHHHhcCCCChHHHHHHHhhccCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHH-HH-hccCChHHHHHHHH
Confidence 4466788999999999999999999998754 23489999999999999999999999987 75 34678889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcc---CCHHHHHHHHHHhccChhhHHHhhcCCCCCCchhhHHhhhHHHHHHHHHHHHHHHH
Q 029894 105 CADKYTYAGDSLQASGQDLAT---EDYDYAYLHISAAADYPNACHNAFRRSPGLAYPAELARREDGLKQICDVVLGIIDH 181 (186)
Q Consensus 105 C~~~y~~a~~~L~~a~~~l~~---~~~~~a~~~lsaa~~~~~tC~d~f~~~~~~~~~~~l~~~~~~~~~l~sialaii~~ 181 (186)
|.|+|++++++|++++++++. ++++|+++|||+|++|++||.|||.+.. ++++...++++.+|++|+|+|++.
T Consensus 124 C~ELl~davd~L~~Sl~~l~~~~~~~~~Dv~TWLSAALT~q~TC~DGF~~~~----~~~~~~~l~n~~qL~SNsLAiv~~ 199 (548)
T PLN02301 124 CVELMDLSKDRIKDSVEALGNVTSKSHADAHTWLSSVLTNHVTCLDGINGPS----RQSMKPGLKDLISRARTSLAILVS 199 (548)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHhcchhhHHhhhhhhh----hhhHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999998888764 4589999999999999999999998642 578999999999999999999998
Q ss_pred hhc
Q 029894 182 IIS 184 (186)
Q Consensus 182 l~~ 184 (186)
+.+
T Consensus 200 l~~ 202 (548)
T PLN02301 200 VSP 202 (548)
T ss_pred ccc
Confidence 653
No 12
>PLN02713 Probable pectinesterase/pectinesterase inhibitor
Probab=99.95 E-value=3.4e-27 Score=204.74 Aligned_cols=177 Identities=17% Similarity=0.188 Sum_probs=137.9
Q ss_pred CCchhHHHHHHHHHHHHHHhhCc-ccccccchHHHHHHhccCCCccchHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 029894 1 MGSSIFLFTLFIAFHLLIFRQQP-SIFAAADMNLIQKTCKNTKYYDLCVSSLKSNPRSSSVDTKGLANIMVGVGFANATA 79 (186)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~C~~T~~~~~C~~~L~s~p~s~~~d~~~la~~ai~~a~~~a~~ 79 (186)
|++.+..+.-+.|++|++|.... +-.++.....+..+|+.|+||++|+++|.+. ...+++++++++|++++.++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~C~~T~YP~~C~ssLs~s---~~~d~~~l~~aaL~~tl~~a~~ 77 (566)
T PLN02713 1 MSSKLILLTTLALLLLLFFSSSSASDPPPSTPVSPSTICNTTPDPSFCKSVLPHN---QPGNVYDYGRFSVRKSLSQSRK 77 (566)
T ss_pred CchhHHHHHHHHHHHHHhcchhhhcCCCcCCCCCCccccCCCCChHHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHH
Confidence 55555444433333333333211 1223344556889999999999999999752 2468999999999999999999
Q ss_pred HHHHHHHHHhcCCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------CCHHHHHHHHHHhccChhhHHHhhc
Q 029894 80 TSSYLSSQLLSTKT--NDTTLKKVLKECADKYTYAGDSLQASGQDLAT-------EDYDYAYLHISAAADYPNACHNAFR 150 (186)
Q Consensus 80 ~~~~i~~~l~~~~~--~~~~~~~al~~C~~~y~~a~~~L~~a~~~l~~-------~~~~~a~~~lsaa~~~~~tC~d~f~ 150 (186)
+...+.. +.+... .++..+.||+||.|+|++++++|++++.+++. ..++|+++|||+|++|++||.|||.
T Consensus 78 a~~~vs~-L~~~~~~~~~~r~k~AL~DC~ELlddavD~L~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALTnq~TClDGF~ 156 (566)
T PLN02713 78 FLSLVDR-YLKRNSTLLSKSAIRALEDCQFLAGLNIDFLLSSFETVNSSSKTLSDPQADDVQTLLSAILTNQQTCLDGLQ 156 (566)
T ss_pred HHHHHHH-HHhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHhhcchhhhhhhhh
Confidence 9999987 764332 37888999999999999999999999999863 2478999999999999999999998
Q ss_pred CCC-CCCchhhHHhhhHHHHHHHHHHHHHHHH
Q 029894 151 RSP-GLAYPAELARREDGLKQICDVVLGIIDH 181 (186)
Q Consensus 151 ~~~-~~~~~~~l~~~~~~~~~l~sialaii~~ 181 (186)
+.+ +..++..+.....++.+|++|+|||++.
T Consensus 157 ~~~~~~~~k~~v~~~l~nvt~LtSNaLAlv~~ 188 (566)
T PLN02713 157 AASSAWSVRNGLAVPLSNDTKLYSVSLALFTK 188 (566)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 653 2245667888889999999999999986
No 13
>PLN02990 Probable pectinesterase/pectinesterase inhibitor
Probab=99.95 E-value=9.5e-27 Score=202.14 Aligned_cols=150 Identities=19% Similarity=0.287 Sum_probs=130.1
Q ss_pred hHHHHHHhccCCCccchHHhhcc-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCChhHHHHHHHHHHH
Q 029894 31 MNLIQKTCKNTKYYDLCVSSLKS-NPRSSSVDTKGLANIMVGVGFANATATSSYLSSQLLST-KTNDTTLKKVLKECADK 108 (186)
Q Consensus 31 ~~~i~~~C~~T~~~~~C~~~L~s-~p~s~~~d~~~la~~ai~~a~~~a~~~~~~i~~~l~~~-~~~~~~~~~al~~C~~~ 108 (186)
...|+..|+.|+||++|+++|.+ .|. ..+|++|++.++++++..+..+...+.. +... +..+++.+.|++||.|+
T Consensus 53 ~~~Ik~~C~~T~YP~lC~ssLs~a~~~--~~~p~~Li~aal~vtl~~~~~a~~~~~~-l~~~~~~~~~r~k~Al~DC~EL 129 (572)
T PLN02990 53 TKAVEAVCAPTDYKETCVNSLMKASPD--STQPLDLIKLGFNVTIRSINDSIKKASG-ELKAKAANDPETKGALELCEKL 129 (572)
T ss_pred hHHHHHhhcCCCCcHHHHHHhhhcccc--CCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhccCCCHHHHHHHHHHHHH
Confidence 45899999999999999999998 443 4689999999999999999999888876 5422 35788999999999999
Q ss_pred HHHHHHHHHHHHHHhccC-------CHHHHHHHHHHhccChhhHHHhhcCCCCCCchhhHHhhhHHHHHHHHHHHHHHHH
Q 029894 109 YTYAGDSLQASGQDLATE-------DYDYAYLHISAAADYPNACHNAFRRSPGLAYPAELARREDGLKQICDVVLGIIDH 181 (186)
Q Consensus 109 y~~a~~~L~~a~~~l~~~-------~~~~a~~~lsaa~~~~~tC~d~f~~~~~~~~~~~l~~~~~~~~~l~sialaii~~ 181 (186)
|++++++|++++++++.. .++|+++|||+|++|++||.|||++.++ .++..+.....++.+|++|+|+|++.
T Consensus 130 lddAvdeL~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALTnq~TClDGF~e~~s-~lk~~~~~~l~nv~~LtSNALAiv~~ 208 (572)
T PLN02990 130 MNDATDDLKKCLDNFDGFSIDQIEDFVEDLRVWLSGSIAYQQTCMDTFEEIKS-NLSQDMLKIFKTSRELTSNGLAMITN 208 (572)
T ss_pred HHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHhccHhhHHHhhhccch-hHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999998731 2689999999999999999999986543 56788888889999999999999998
Q ss_pred hhc
Q 029894 182 IIS 184 (186)
Q Consensus 182 l~~ 184 (186)
+.+
T Consensus 209 ~~~ 211 (572)
T PLN02990 209 ISN 211 (572)
T ss_pred hhc
Confidence 654
No 14
>PLN02217 probable pectinesterase/pectinesterase inhibitor
Probab=99.95 E-value=7.3e-27 Score=204.59 Aligned_cols=149 Identities=17% Similarity=0.302 Sum_probs=130.8
Q ss_pred HHHHHHhccCCCccchHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHHHH
Q 029894 32 NLIQKTCKNTKYYDLCVSSLKSNPRSSSVDTKGLANIMVGVGFANATATSSYLSSQLLSTKTNDTTLKKVLKECADKYTY 111 (186)
Q Consensus 32 ~~i~~~C~~T~~~~~C~~~L~s~p~s~~~d~~~la~~ai~~a~~~a~~~~~~i~~~l~~~~~~~~~~~~al~~C~~~y~~ 111 (186)
+.|+..|+.|+||++|+++|.+.+ ....++++|++.+++++++++..+...+.. +. ....+++.+.|++||.++|++
T Consensus 54 ~~Ikt~C~sT~YP~lC~sSLs~~~-~~~~~p~dLi~aaL~vTl~a~~~a~~~~s~-L~-~~~~~~r~k~AL~DClELldd 130 (670)
T PLN02217 54 KAIKDVCAPTDYKETCEDTLRKDA-KNTSDPLELVKTAFNATMKQISDVAKKSQT-MI-ELQKDPRTKMALDQCKELMDY 130 (670)
T ss_pred HHHHHHhcCCCCcHHHHHHhhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HH-hhcCChHHHHHHHHHHHHHHH
Confidence 489999999999999999999988 445799999999999999999999988887 64 334578899999999999999
Q ss_pred HHHHHHHHHHHhcc-------CCHHHHHHHHHHhccChhhHHHhhcCCCCCCchhhHHhhhHHHHHHHHHHHHHHHHhhc
Q 029894 112 AGDSLQASGQDLAT-------EDYDYAYLHISAAADYPNACHNAFRRSPGLAYPAELARREDGLKQICDVVLGIIDHIIS 184 (186)
Q Consensus 112 a~~~L~~a~~~l~~-------~~~~~a~~~lsaa~~~~~tC~d~f~~~~~~~~~~~l~~~~~~~~~l~sialaii~~l~~ 184 (186)
++++|++++..+.. ...+|+++|||+|++|++||.|||++.++ .++..|.....++.+|++|+|+|++.+.+
T Consensus 131 AvDeL~~Sl~~L~~~~~~~~~~~~dDvqTWLSAALTnQdTClDGF~~~~~-~vk~~m~~~l~nvseLtSNALAmv~~lss 209 (670)
T PLN02217 131 AIGELSKSFEELGKFEFHKVDEALIKLRIWLSATISHEQTCLDGFQGTQG-NAGETIKKALKTAVQLTHNGLAMVSEMSN 209 (670)
T ss_pred HHHHHHHHHHHHhhccccccccchhHHHHHHHHHHhchhHHHHhhhhhch-HHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 99999999999862 12589999999999999999999986543 46788888899999999999999997643
No 15
>PLN02506 putative pectinesterase/pectinesterase inhibitor
Probab=99.95 E-value=1.1e-26 Score=200.23 Aligned_cols=153 Identities=12% Similarity=0.192 Sum_probs=132.4
Q ss_pred ccchHHHHHHhccCCCccchHHhhccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHH
Q 029894 28 AADMNLIQKTCKNTKYYDLCVSSLKSNPRS-SSVDTKGLANIMVGVGFANATATSSYLSSQLLSTKTNDTTLKKVLKECA 106 (186)
Q Consensus 28 ~~~~~~i~~~C~~T~~~~~C~~~L~s~p~s-~~~d~~~la~~ai~~a~~~a~~~~~~i~~~l~~~~~~~~~~~~al~~C~ 106 (186)
......|+..|+.|+||++|+++|.+.... ...||++|+++++++++.++..+...+.. +. ....+++.+.|++||.
T Consensus 31 ~~~~~~I~s~C~~T~YP~~C~ssLs~~~~~~~~~~p~~L~~aAL~vtl~~a~~a~~~v~~-l~-~~~~~~r~~~Al~DC~ 108 (537)
T PLN02506 31 LNFQALIAQACQFVENHSSCVSNIQAELKKSGPRTPHSVLSAALKATLDEARLAIDMITK-FN-ALSISYREQVAIEDCK 108 (537)
T ss_pred hhHHHHHHHHccCCCCcHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-hccCChHHHHHHHHHH
Confidence 355668999999999999999999986433 34689999999999999999999999987 75 3346788899999999
Q ss_pred HHHHHHHHHHHHHHHHhcc----CC----HHHHHHHHHHhccChhhHHHhhcCCCCCCchhhHHhhhHHHHHHHHHHHHH
Q 029894 107 DKYTYAGDSLQASGQDLAT----ED----YDYAYLHISAAADYPNACHNAFRRSPGLAYPAELARREDGLKQICDVVLGI 178 (186)
Q Consensus 107 ~~y~~a~~~L~~a~~~l~~----~~----~~~a~~~lsaa~~~~~tC~d~f~~~~~~~~~~~l~~~~~~~~~l~sialai 178 (186)
|+|++++++|++++.+++. +. .+|+++|||+|+++++||.|||++.++ .++..+..+..++.+|++|+|||
T Consensus 109 EllddSvd~L~~Sl~el~~~~~~~~~~~~~~Dv~TWLSAALT~q~TC~DGF~~~~~-~~k~~v~~~l~nv~~LtSNALAi 187 (537)
T PLN02506 109 ELLDFSVSELAWSLLEMNKIRAGHDNVAYEGNLKAWLSAALSNQDTCLEGFEGTDR-HLENFIKGSLKQVTQLISNVLAM 187 (537)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccchhhHHhHHHHHhccHhHHHHhhhhcch-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988853 12 489999999999999999999987543 56788999999999999999999
Q ss_pred HHHhh
Q 029894 179 IDHII 183 (186)
Q Consensus 179 i~~l~ 183 (186)
++.+.
T Consensus 188 v~~l~ 192 (537)
T PLN02506 188 YTQLH 192 (537)
T ss_pred Hhhcc
Confidence 98765
No 16
>PLN02197 pectinesterase
Probab=99.95 E-value=1.8e-26 Score=200.39 Aligned_cols=176 Identities=15% Similarity=0.210 Sum_probs=140.9
Q ss_pred CCchhHHHHHHHHHHHHHHhhCccccc-------ccchHHHHHHhccCCCccchHHhhccCCCCCCCCHHHHHHHHHHHH
Q 029894 1 MGSSIFLFTLFIAFHLLIFRQQPSIFA-------AADMNLIQKTCKNTKYYDLCVSSLKSNPRSSSVDTKGLANIMVGVG 73 (186)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~i~~~C~~T~~~~~C~~~L~s~p~s~~~d~~~la~~ai~~a 73 (186)
|-+++.+..+.+++++.+......... ......|+.+|+.|+||++|+++|++.+ ..++++|++.+++++
T Consensus 1 ~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~k~I~s~C~~T~YP~lC~ssLs~~~---s~~p~~L~~aaL~vt 77 (588)
T PLN02197 1 MIGKVVVSVASILLIVGVAIGVVAFINKNGDANLSPQMKAVQGICQSTSDKASCVKTLEPVK---SDDPNKLIKAFMLAT 77 (588)
T ss_pred CCceEhHHHHHHHHHHHHHhheeEEEeccCCCCCChhHHHHHHhcCCCCChHHHHHHHhhcc---CCCHHHHHHHHHHHH
Confidence 667766666555555444332211111 1123379999999999999999999987 358999999999999
Q ss_pred HHHHHHHHHHHHHHHh--cCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcc------CCHHHHHHHHHHhccChhhH
Q 029894 74 FANATATSSYLSSQLL--STKTNDTTLKKVLKECADKYTYAGDSLQASGQDLAT------EDYDYAYLHISAAADYPNAC 145 (186)
Q Consensus 74 ~~~a~~~~~~i~~~l~--~~~~~~~~~~~al~~C~~~y~~a~~~L~~a~~~l~~------~~~~~a~~~lsaa~~~~~tC 145 (186)
+.++..+...+.. +. ..+..+++.+.|++||.++|++++++|++++.++.. ...+|+++|||+|++|++||
T Consensus 78 l~~~~~a~~~~s~-l~~~~~~~~~~r~k~Al~DC~eLl~davd~L~~Sl~~l~~~~~~~~~~~~DvqTWLSAALTnq~TC 156 (588)
T PLN02197 78 KDAITKSSNFTGQ-TEGNMGSSISPNNKAVLDYCKRVFMYALEDLSTIVEEMGEDLNQIGSKIDQLKQWLTGVYNYQTDC 156 (588)
T ss_pred HHHHHHHHHHHHH-hhhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHhChhhh
Confidence 9999999988885 53 123457889999999999999999999999999872 23689999999999999999
Q ss_pred HHhhcCCCCCCchhhHHhhhHHHHHHHHHHHHHHHHhh
Q 029894 146 HNAFRRSPGLAYPAELARREDGLKQICDVVLGIIDHII 183 (186)
Q Consensus 146 ~d~f~~~~~~~~~~~l~~~~~~~~~l~sialaii~~l~ 183 (186)
.|||.+. .++..+.....++.+|++|+|||++.+.
T Consensus 157 lDGf~~~---~~k~~v~~~l~nv~~LtSNaLAiv~~ls 191 (588)
T PLN02197 157 LDDIEED---DLRKTIGEGIANSKILTSNAIDIFHSVV 191 (588)
T ss_pred hccccCc---chHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 9999864 3577888888999999999999998864
No 17
>PLN02745 Putative pectinesterase/pectinesterase inhibitor
Probab=99.94 E-value=1.4e-25 Score=195.46 Aligned_cols=147 Identities=18% Similarity=0.265 Sum_probs=130.1
Q ss_pred hHHHHHHhccCCCccchHHhhccCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHH
Q 029894 31 MNLIQKTCKNTKYYDLCVSSLKSNPR--SSSVDTKGLANIMVGVGFANATATSSYLSSQLLSTKTNDTTLKKVLKECADK 108 (186)
Q Consensus 31 ~~~i~~~C~~T~~~~~C~~~L~s~p~--s~~~d~~~la~~ai~~a~~~a~~~~~~i~~~l~~~~~~~~~~~~al~~C~~~ 108 (186)
...|+.+|+.|+||++|+++|.+... +...+|.+|++++|+++++.+..+...+.+ +. ..++..+.|++||.++
T Consensus 79 ~~~Ik~~C~~T~YP~~C~sSLs~~~~~~~~~~~p~~Ll~aAL~vtl~~~~~a~~~~~~-l~---~~~~r~k~Al~DC~EL 154 (596)
T PLN02745 79 DKIIQTVCNATLYKQTCENTLKKGTEKDPSLAQPKDLLKSAIKAVNDDLDKVLKKVLS-FK---FENPDEKDAIEDCKLL 154 (596)
T ss_pred HHHHHHhcCCCCChHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHh-hc---cCCHHHHHHHHHHHHH
Confidence 46799999999999999999998653 234689999999999999999999888876 53 4678899999999999
Q ss_pred HHHHHHHHHHHHHHhcc------CCHHHHHHHHHHhccChhhHHHhhcCCCCCCchhhHHhhhHHHHHHHHHHHHHHHHh
Q 029894 109 YTYAGDSLQASGQDLAT------EDYDYAYLHISAAADYPNACHNAFRRSPGLAYPAELARREDGLKQICDVVLGIIDHI 182 (186)
Q Consensus 109 y~~a~~~L~~a~~~l~~------~~~~~a~~~lsaa~~~~~tC~d~f~~~~~~~~~~~l~~~~~~~~~l~sialaii~~l 182 (186)
|++++++|++++..+.. ..++|+++|||+|++|++||.|||++. .++++|..++.++.+|++|+|||++.+
T Consensus 155 lddAid~L~~Sl~~l~~~~~~~~~~~~Dv~TWLSAALT~q~TClDGF~e~---~l~s~m~~~l~~~~eLtSNALAiv~~l 231 (596)
T PLN02745 155 VEDAKEELKASISRINDEVNKLAKNVPDLNNWLSAVMSYQETCIDGFPEG---KLKSEMEKTFKSSQELTSNSLAMVSSL 231 (596)
T ss_pred HHHHHHHHHHHHHHHhhcccccccchHHHHHHHHHHhccHhHHHhhhccc---chHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999863 357899999999999999999999873 468999999999999999999999986
Q ss_pred hc
Q 029894 183 IS 184 (186)
Q Consensus 183 ~~ 184 (186)
.+
T Consensus 232 ss 233 (596)
T PLN02745 232 TS 233 (596)
T ss_pred hh
Confidence 54
No 18
>PLN02698 Probable pectinesterase/pectinesterase inhibitor
Probab=99.93 E-value=2.4e-25 Score=190.83 Aligned_cols=151 Identities=21% Similarity=0.281 Sum_probs=130.9
Q ss_pred cchHHHHHHhccCCCccchHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--ChhHHHHHHHHH
Q 029894 29 ADMNLIQKTCKNTKYYDLCVSSLKSNPRSSSVDTKGLANIMVGVGFANATATSSYLSSQLLSTKTN--DTTLKKVLKECA 106 (186)
Q Consensus 29 ~~~~~i~~~C~~T~~~~~C~~~L~s~p~s~~~d~~~la~~ai~~a~~~a~~~~~~i~~~l~~~~~~--~~~~~~al~~C~ 106 (186)
+....|+..|+.|+||++|+++|++.+. ++++|++.+|++++.++..+...+.+ +...... ++..+.+++||.
T Consensus 20 ~~~~~I~~~C~~T~YP~~C~ssLs~~~~----~p~~Li~aal~vtl~~~~~a~~~~~~-l~~~~~~~~~~r~~~Al~DC~ 94 (497)
T PLN02698 20 AYQNEVQRECSFTKYPSLCVQTLRGLRH----DGVDIVSVLVNKTISETNLPLSSSMG-SSYQLSLEEATYTPSVSDSCE 94 (497)
T ss_pred hHHHHHHHhccCCCChHHHHHHHhccCC----CHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhcccCcChHHHHHHHHHH
Confidence 4567899999999999999999999774 89999999999999999999999887 6433222 477789999999
Q ss_pred HHHHHHHHHHHHHHHHhcc---CCHHHHHHHHHHhccChhhHHHhhcCCC---CCCchhhHHhhhHHHHHHHHHHHHHHH
Q 029894 107 DKYTYAGDSLQASGQDLAT---EDYDYAYLHISAAADYPNACHNAFRRSP---GLAYPAELARREDGLKQICDVVLGIID 180 (186)
Q Consensus 107 ~~y~~a~~~L~~a~~~l~~---~~~~~a~~~lsaa~~~~~tC~d~f~~~~---~~~~~~~l~~~~~~~~~l~sialaii~ 180 (186)
|+|++++++|++++.+|.. ..++|+++|||+|+++++||.|||.+.. +..+++++..++.++.+|++|+|+|++
T Consensus 95 Ell~dsvd~L~~Sl~~l~~~~~~~~~Dv~TWLSAALT~q~TClDGF~~~~~~~~~~v~~~i~~~l~~~~~ltSNALAmv~ 174 (497)
T PLN02698 95 RLMKMSLKRLRQSLLALKGSSRKNKHDIQTWLSAALTFQQACKDSIVDSTGYSGTSAISQISQKMDHLSRLVSNSLALVN 174 (497)
T ss_pred HHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHhhcchhhHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998865 4578999999999999999999995321 225788999999999999999999999
Q ss_pred Hhhc
Q 029894 181 HIIS 184 (186)
Q Consensus 181 ~l~~ 184 (186)
.+.+
T Consensus 175 ~l~~ 178 (497)
T PLN02698 175 RITP 178 (497)
T ss_pred hhhc
Confidence 8764
No 19
>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional
Probab=99.92 E-value=3.4e-24 Score=185.27 Aligned_cols=144 Identities=20% Similarity=0.301 Sum_probs=125.3
Q ss_pred HHHhccCCCccchHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCChhHHHHHHHHHHHHH
Q 029894 35 QKTCKNTKYYDLCVSSLKSNPRSSSVDTKGLANIMVGVGFANATATSSYLSSQLLS----TKTNDTTLKKVLKECADKYT 110 (186)
Q Consensus 35 ~~~C~~T~~~~~C~~~L~s~p~s~~~d~~~la~~ai~~a~~~a~~~~~~i~~~l~~----~~~~~~~~~~al~~C~~~y~ 110 (186)
...|+.|+||++|+++|.+.+.+. .++.++++.+|++++.++..+...+.+ +.. .+..+++.+.|++||.|+++
T Consensus 3 ~~~C~~T~YP~lC~ssLs~~~~~~-~~p~~l~~aaL~vtl~~a~~a~~~vs~-l~~~~~~~~~~~~r~~~AL~DC~ELld 80 (538)
T PLN03043 3 SLACKSTLYPKLCRSILSTVKSSP-SDPYEYGKFSVKQCLKQARRLSKVINY-YLTHENQPGKMTHEEIGALADCGELSE 80 (538)
T ss_pred CcccCCCCCcHHHHHHHhhccCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhccccccCCHHHHHHHHHHHHHHH
Confidence 358999999999999999877543 589999999999999999999998887 652 12457788899999999999
Q ss_pred HHHHHHHHHHHHhccCC------HHHHHHHHHHhccChhhHHHhhcCCCCCCchhhHHhhhHHHHHHHHHHHHHHHH
Q 029894 111 YAGDSLQASGQDLATED------YDYAYLHISAAADYPNACHNAFRRSPGLAYPAELARREDGLKQICDVVLGIIDH 181 (186)
Q Consensus 111 ~a~~~L~~a~~~l~~~~------~~~a~~~lsaa~~~~~tC~d~f~~~~~~~~~~~l~~~~~~~~~l~sialaii~~ 181 (186)
+++++|++++.++.... .+|+++|||+|++|++||.|||.+.++ .++..+.....++.+|++|+|||++.
T Consensus 81 dSvD~L~~Sl~~L~~~~~~~~~~~~DvqTWLSAALTnqdTClDGF~~~~~-~~k~~i~~~l~nvt~LtSNaLAlv~~ 156 (538)
T PLN03043 81 LNVDYLETISSELKSAELMTDALVERVTSLLSGVVTNQQTCYDGLVDSKS-SFAAALGAPLGNLTRLYSVSLGLVSH 156 (538)
T ss_pred HHHHHHHHHHHHHhccccccccchhhHHHhHHHhhcChhhhhchhhccch-hHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999986432 579999999999999999999987543 46778888899999999999999985
No 20
>PLN02933 Probable pectinesterase/pectinesterase inhibitor
Probab=99.83 E-value=1.9e-19 Score=154.79 Aligned_cols=124 Identities=14% Similarity=0.184 Sum_probs=108.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCHHHHHHH
Q 029894 59 SVDTKGLANIMVGVGFANATATSSYLSSQLLST--KTNDTTLKKVLKECADKYTYAGDSLQASGQDLAT--EDYDYAYLH 134 (186)
Q Consensus 59 ~~d~~~la~~ai~~a~~~a~~~~~~i~~~l~~~--~~~~~~~~~al~~C~~~y~~a~~~L~~a~~~l~~--~~~~~a~~~ 134 (186)
+.|+.+|++.+|+++++++..+...+.. +.+. +..+++.+.|++||.|+|++++++|++++..+.. +.++|+++|
T Consensus 48 ~~~~~~L~~aaL~vtl~~a~~a~~~vs~-L~~~~~~~l~~r~~~Al~DC~El~~davd~L~~S~~~l~~~~~~~~Dv~TW 126 (530)
T PLN02933 48 TKTIPELIIADLNLTILKVNLASSNFSD-LQTRLGPNLTHRERCAFEDCLGLLDDTISDLTTAISKLRSSSPEFNDVSML 126 (530)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHH
Confidence 3589999999999999999999999987 7532 2467888999999999999999999999999875 568999999
Q ss_pred HHHhccChhhHHHhhcCCC-------CCCchhhHHhhhHHHHHHHHHHHHHHHHhh
Q 029894 135 ISAAADYPNACHNAFRRSP-------GLAYPAELARREDGLKQICDVVLGIIDHII 183 (186)
Q Consensus 135 lsaa~~~~~tC~d~f~~~~-------~~~~~~~l~~~~~~~~~l~sialaii~~l~ 183 (186)
||+|+++++||+|||++.+ +..++..+.....++.+|++|+|||++.+.
T Consensus 127 LSAALT~q~TC~DGF~~~~~~~~~~~~~~vk~~v~~~l~~v~~LtSNALAlv~~ls 182 (530)
T PLN02933 127 LSNAMTNQDTCLDGFSTSDNENNNDMTYELPENLKESILDISNHLSNSLAMLQNIS 182 (530)
T ss_pred HHHHhcchhhHhhhhhccCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999998643 114677888888999999999999999765
No 21
>PLN02201 probable pectinesterase/pectinesterase inhibitor
Probab=99.81 E-value=9.8e-19 Score=150.42 Aligned_cols=119 Identities=14% Similarity=0.106 Sum_probs=101.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhccC---------CHHHHH
Q 029894 62 TKGLANIMVGVGFANATATSSYLSSQLLSTKTNDTTLKKVLKECADKYTYAGDSLQASGQDLATE---------DYDYAY 132 (186)
Q Consensus 62 ~~~la~~ai~~a~~~a~~~~~~i~~~l~~~~~~~~~~~~al~~C~~~y~~a~~~L~~a~~~l~~~---------~~~~a~ 132 (186)
+..+++.+++++++++..+...+.+ +.+ ...+++.+.|++||.|++++++++|++++.+|+.. ..+|++
T Consensus 37 ~~~~~~~~L~~tl~~a~~a~~~vs~-l~~-~~~~~r~~~Al~DC~ELl~davD~L~~Sl~eL~~~~~~~~~~~~~~~Dvq 114 (520)
T PLN02201 37 PPSEFVSSLKTTVDVIRKVVSIVSQ-FDK-VFGDSRLSNAISDCLDLLDFAAEELSWSISASQNPNGKDNSTGDVGSDLR 114 (520)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHH-Hhh-ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHH
Confidence 4567788999999999999999887 753 34578889999999999999999999999988531 268999
Q ss_pred HHHHHhccChhhHHHhhcCCCCCCchhhHHhhhHHHHHHHHHHHHHHHHhh
Q 029894 133 LHISAAADYPNACHNAFRRSPGLAYPAELARREDGLKQICDVVLGIIDHII 183 (186)
Q Consensus 133 ~~lsaa~~~~~tC~d~f~~~~~~~~~~~l~~~~~~~~~l~sialaii~~l~ 183 (186)
+|||+|++|++||.|||++.++ .++..+.....++.++++|+|+|++...
T Consensus 115 TWLSAALTnq~TClDGF~~~~~-~~k~~v~~~l~nvt~LtSNaLALv~~~~ 164 (520)
T PLN02201 115 TWLSAALSNQDTCIEGFDGTNG-IVKKLVAGSLSQVGSTVRELLTMVHPPP 164 (520)
T ss_pred HHHHhhhcchhhhhhhhhcccc-chhHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 9999999999999999987543 4566777888999999999999998754
No 22
>PLN02488 probable pectinesterase/pectinesterase inhibitor
Probab=99.76 E-value=8.4e-18 Score=143.25 Aligned_cols=143 Identities=16% Similarity=0.099 Sum_probs=121.2
Q ss_pred HHhccCCCccchHHhhccCC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHH----H
Q 029894 36 KTCKNTKYYDLCVSSLKSNP----RSSSVDTKGLANIMVGVGFANATATSSYLSSQLLSTKTN-DTTLKKVLKEC----A 106 (186)
Q Consensus 36 ~~C~~T~~~~~C~~~L~s~p----~s~~~d~~~la~~ai~~a~~~a~~~~~~i~~~l~~~~~~-~~~~~~al~~C----~ 106 (186)
..|..+++|+.|...+.... .....++..++..+++.++.++..+...+.. +.. ... +++.+.++.|| .
T Consensus 3 ~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~~-~~~-~~~~~~~~~~a~~dc~~~c~ 80 (509)
T PLN02488 3 GVCKGYDDKQSCQNLLLELKTVSSSLSEMRCRDLLIIVLKNSVWRIDMAMIGVME-DTK-LLEEMENDMLGVKEDTNLFE 80 (509)
T ss_pred eecCCCCChHHHHHHHHhhhccccccccCcchHHHHHHHHHHHHHHHHHHHHHHH-HHH-HhhhchhhhhhHHHhHHHHH
Confidence 46999999999999988766 3323468999999999999999999998887 653 333 78889999999 9
Q ss_pred HHHHHHHHHHHHHHHHhcc------CCHHHHHHHHHHhccChhhHHHhhcCCCCCCchhhHHhhhHHHHHHHHHHHHHHH
Q 029894 107 DKYTYAGDSLQASGQDLAT------EDYDYAYLHISAAADYPNACHNAFRRSPGLAYPAELARREDGLKQICDVVLGIID 180 (186)
Q Consensus 107 ~~y~~a~~~L~~a~~~l~~------~~~~~a~~~lsaa~~~~~tC~d~f~~~~~~~~~~~l~~~~~~~~~l~sialaii~ 180 (186)
++|++++++|++++..+.. ...+|+++|||+|++|++||.|||... .++..+.....++.++++|+|+|+.
T Consensus 81 el~~~~~~~l~~s~~~~~~~~~~~~~~~~d~~twLSa~lt~q~TC~dg~~~~---~~~~~~~~~l~~~~~~~sn~La~~~ 157 (509)
T PLN02488 81 EMMESAKDRMIRSVEELLGGESPNLGSYENVHTWLSGVLTSYITCIDEIGEG---AYKRRVEPELEDLISRARVALAIFI 157 (509)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccCcHHHHHHHHHHhHhchhhHhccccCc---chHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999852 236899999999999999999999532 3677788888999999999999998
Q ss_pred Hhh
Q 029894 181 HII 183 (186)
Q Consensus 181 ~l~ 183 (186)
.+.
T Consensus 158 ~~~ 160 (509)
T PLN02488 158 SIS 160 (509)
T ss_pred ccc
Confidence 754
No 23
>PLN02170 probable pectinesterase/pectinesterase inhibitor
Probab=99.68 E-value=2.1e-16 Score=135.83 Aligned_cols=126 Identities=13% Similarity=0.044 Sum_probs=94.5
Q ss_pred CCccchHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 029894 42 KYYDLCVSSLKSNPRSSSVDTKGLANIMVGVGFANATATSSYLSSQLLSTKTNDTTLKKVLKECADKYTYAGDSLQASGQ 121 (186)
Q Consensus 42 ~~~~~C~~~L~s~p~s~~~d~~~la~~ai~~a~~~a~~~~~~i~~~l~~~~~~~~~~~~al~~C~~~y~~a~~~L~~a~~ 121 (186)
+||..|...|++...+ -++.+....+++.+.. . +. . .......|++||.+++++++++|+++++
T Consensus 58 ~~~~~~~~~~s~~~~~---~~~~~~~~~~~~~~~~-----~-----~~-~--~~~~~~~Al~DC~ELlddavd~L~~S~~ 121 (529)
T PLN02170 58 PSSSSKQGFLSSVQES---MNHALFARSLAFNLTL-----S-----HR-T--VQTHTFDPVNDCLELLDDTLDMLSRIVV 121 (529)
T ss_pred CCcchhhhhhhhhhcc---ChHHHHHhhhHhhhhh-----h-----hh-h--cccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999876432 3666766666665441 1 11 0 0112257999999999999999999996
Q ss_pred Hhcc-CCHHHHHHHHHHhccChhhHHHhhcCCCC-CCchhhHHhhhHHHHHHHHHHHHHHHHhh
Q 029894 122 DLAT-EDYDYAYLHISAAADYPNACHNAFRRSPG-LAYPAELARREDGLKQICDVVLGIIDHII 183 (186)
Q Consensus 122 ~l~~-~~~~~a~~~lsaa~~~~~tC~d~f~~~~~-~~~~~~l~~~~~~~~~l~sialaii~~l~ 183 (186)
.... ...+|+++|||+|++|++||.|||++.+. ..++..+.....++.+|++|+|||++.+.
T Consensus 122 ~~~~~~~~~DvqTWLSAALTnq~TClDGf~~~~~~~~~~~~~~~~l~nv~eLtSNALALv~~~~ 185 (529)
T PLN02170 122 IKHADHDEEDVHTWLSAALTNQETCEQSLQEKSSSYKHGLAMDFVARNLTGLLTNSLDLFVSVK 185 (529)
T ss_pred hhccccchhHHHHHHHHHHhchhhHhhhhhccCccchhHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 6543 35789999999999999999999986542 13345566667899999999999998754
No 24
>PLN02916 pectinesterase family protein
Probab=99.50 E-value=1.1e-13 Score=118.54 Aligned_cols=87 Identities=10% Similarity=0.089 Sum_probs=73.7
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHhccChhhHHHhhcCCCCCCchhhHHhhhHHHHHH
Q 029894 92 KTNDTTLKKVLKECADKYTYAGDSLQASGQDLATEDYDYAYLHISAAADYPNACHNAFRRSPGLAYPAELARREDGLKQI 171 (186)
Q Consensus 92 ~~~~~~~~~al~~C~~~y~~a~~~L~~a~~~l~~~~~~~a~~~lsaa~~~~~tC~d~f~~~~~~~~~~~l~~~~~~~~~l 171 (186)
.+.+-....|++||.++|++++++|++++..+.....+|+++|||+|++|++||.|||++... ... ....++.++
T Consensus 55 ~~~~~~~~~Al~DC~ELl~dSvd~L~~Sl~~~~~~~~~DvqTWLSAALTnq~TClDGf~~~~~--~~~---~~v~nvt~l 129 (502)
T PLN02916 55 SGSYYNLGEALSDCEKLYDESEARLSKLLVSHENFTVEDARTWLSGVLANHHTCLDGLEQKGQ--GHK---PMAHNVTFV 129 (502)
T ss_pred cCCcccHhHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHhCHhHHHHhhhhccc--cch---HHHHHHHHH
Confidence 345667889999999999999999999999887777899999999999999999999985432 222 235689999
Q ss_pred HHHHHHHHHHhh
Q 029894 172 CDVVLGIIDHII 183 (186)
Q Consensus 172 ~sialaii~~l~ 183 (186)
++|+|||++.+.
T Consensus 130 tSNaLAlv~~~~ 141 (502)
T PLN02916 130 LSEALALYKKSR 141 (502)
T ss_pred HHHHHHHhhhhh
Confidence 999999998765
No 25
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=93.68 E-value=0.07 Score=36.22 Aligned_cols=20 Identities=30% Similarity=0.429 Sum_probs=15.4
Q ss_pred CCchhHHHHHHHHHHHHHHh
Q 029894 1 MGSSIFLFTLFIAFHLLIFR 20 (186)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~ 20 (186)
|+|+.|+||.++|+++|+++
T Consensus 1 MaSK~~llL~l~LA~lLlis 20 (95)
T PF07172_consen 1 MASKAFLLLGLLLAALLLIS 20 (95)
T ss_pred CchhHHHHHHHHHHHHHHHH
Confidence 99999888877777765554
No 26
>PF10731 Anophelin: Thrombin inhibitor from mosquito; InterPro: IPR018932 Members of this family are all inhibitors of thrombin, the peptidase that is at the end of the blood coagulation cascade and which creates the clot by cleaving fibrinogen. The interaction between thrombin and fibrinogen involves two different areas of contact - via the thrombin active site and via a second substrate-binding site known as an exosite. The inhibitor acts by blocking the exosite, rather than by interacting with the active site. The inhibitors are from mosquitoes that feed on human blood and which, by inhibiting thrombin, prevent the blood from clotting and keep it flowing.
Probab=84.40 E-value=1.2 Score=27.29 Aligned_cols=31 Identities=19% Similarity=0.379 Sum_probs=23.7
Q ss_pred CCchhHHHHHHHHHHHHHHhhCcccccccchH
Q 029894 1 MGSSIFLFTLFIAFHLLIFRQQPSIFAAADMN 32 (186)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 (186)
||++.+...|+|++++.+..+.| +.+.|..+
T Consensus 1 MA~Kl~vialLC~aLva~vQ~AP-QYa~GeeP 31 (65)
T PF10731_consen 1 MASKLIVIALLCVALVAIVQSAP-QYAPGEEP 31 (65)
T ss_pred CcchhhHHHHHHHHHHHHHhcCc-ccCCCCCC
Confidence 99999999999999987666555 55566544
No 27
>TIGR00208 fliS flagellar biosynthetic protein FliS. The function of this protein in flagellar biosynthesis is unknown, but appears to be regulatory. The member of this family in Vibrio parahaemolyticus is designated FlaJ (creating a synonym for FliS) and was shown essential for flagellin biosynthesis.
Probab=67.91 E-value=40 Score=23.79 Aligned_cols=36 Identities=11% Similarity=0.088 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHhccCCHHHHHHHHHHhccCh
Q 029894 107 DKYTYAGDSLQASGQDLATEDYDYAYLHISAAADYP 142 (186)
Q Consensus 107 ~~y~~a~~~L~~a~~~l~~~~~~~a~~~lsaa~~~~ 142 (186)
-+|+.++..|+.|..++..+++......++.|..-.
T Consensus 26 mLydg~i~~l~~a~~ai~~~d~~~~~~~i~ka~~Ii 61 (124)
T TIGR00208 26 MLYNGCLKFIRLAAQAIENDDIERKNENLIKAQNII 61 (124)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 456666666666666666666666665555554444
No 28
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=64.09 E-value=3.8 Score=27.53 Aligned_cols=28 Identities=11% Similarity=0.317 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 029894 100 KVLKECADKYTYAGDSLQASGQDLATED 127 (186)
Q Consensus 100 ~al~~C~~~y~~a~~~L~~a~~~l~~~~ 127 (186)
..++||.+.|++-..++++|.++++++.
T Consensus 61 ~tFnDcpeA~~eL~~eI~eAK~dLr~kG 88 (91)
T PF08285_consen 61 ATFNDCPEAAKELQKEIKEAKADLRKKG 88 (91)
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 3578899999999999999999997653
No 29
>KOG1733 consensus Mitochondrial import inner membrane translocase, subunit TIM13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=62.99 E-value=43 Score=22.42 Aligned_cols=53 Identities=21% Similarity=0.299 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH----HhcCC--CCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 029894 68 IMVGVGFANATATSSYLSSQ----LLSTK--TNDTTLKKVLKECADKYTYAGDSLQASG 120 (186)
Q Consensus 68 ~ai~~a~~~a~~~~~~i~~~----l~~~~--~~~~~~~~al~~C~~~y~~a~~~L~~a~ 120 (186)
+.-++|..+|.+.+..+..+ -...+ +.++..+.++..|.+-|-++-.-+.+++
T Consensus 26 VkqqlAvAnAqeLv~kisekCf~KCit~PGssl~~~e~~Cis~CmdRyMdawniVSrty 84 (97)
T KOG1733|consen 26 VKQQLAVANAQELVSKISEKCFDKCITKPGSSLDSSEKSCISRCMDRYMDAWNIVSRTY 84 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567778888888777753 11122 3577889999999999988866555544
No 30
>PF02561 FliS: Flagellar protein FliS; InterPro: IPR003713 The fliD operon of several bacteria consists of three flagellar genes, fliD, fliS, and fliT, and is transcribed in this order []. In Bacillus subtilis the operon encoding the flagellar proteins FliD, FliS, and FliT is sigma D-dependent [].; GO: 0009296 flagellum assembly, 0009288 bacterial-type flagellum; PDB: 1VH6_A 3IQC_B 3K1I_B 1ORJ_B 1ORY_A.
Probab=61.84 E-value=52 Score=22.94 Aligned_cols=32 Identities=16% Similarity=0.094 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHhccCCHHHHHHHHHHh
Q 029894 107 DKYTYAGDSLQASGQDLATEDYDYAYLHISAA 138 (186)
Q Consensus 107 ~~y~~a~~~L~~a~~~l~~~~~~~a~~~lsaa 138 (186)
-+|+.++..++.|...+..+++.+....+..|
T Consensus 24 ~Lyd~ai~~l~~a~~a~~~~~~~~~~~~l~ka 55 (122)
T PF02561_consen 24 MLYDGAIEFLKQAKEAIEQGDIEEKNEALQKA 55 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 34445555555555544444444444444333
No 31
>PRK05685 fliS flagellar protein FliS; Validated
Probab=59.75 E-value=61 Score=23.08 Aligned_cols=34 Identities=18% Similarity=-0.006 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHhc
Q 029894 106 ADKYTYAGDSLQASGQDLATEDYDYAYLHISAAA 139 (186)
Q Consensus 106 ~~~y~~a~~~L~~a~~~l~~~~~~~a~~~lsaa~ 139 (186)
.-+|+.++..++.|..++..+++......+.-|.
T Consensus 29 ~mLydgai~~l~~A~~ai~~~~~~~~~~~l~ka~ 62 (132)
T PRK05685 29 QMLYEGALSFLAQAKLAIEQGDIEAKGEYLSKAI 62 (132)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3455556666666666665555555555444443
No 32
>KOG4841 consensus Dolichol-phosphate mannosyltransferase, subunit 3 [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=58.96 E-value=7.4 Score=25.73 Aligned_cols=27 Identities=15% Similarity=0.357 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccC
Q 029894 100 KVLKECADKYTYAGDSLQASGQDLATE 126 (186)
Q Consensus 100 ~al~~C~~~y~~a~~~L~~a~~~l~~~ 126 (186)
.-.+||.|.|-+-+.++++|.++++++
T Consensus 65 ATfnDc~eA~veL~~~IkEAr~~L~rk 91 (95)
T KOG4841|consen 65 ATFNDCEEAAVELQSQIKEARADLARK 91 (95)
T ss_pred eccCCcHHHHHHHHHHHHHHHHHHHHc
Confidence 357899999999999999999999764
No 33
>COG1516 FliS Flagellin-specific chaperone FliS [Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones]
Probab=42.96 E-value=1.3e+02 Score=21.74 Aligned_cols=35 Identities=23% Similarity=0.149 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHhcc
Q 029894 106 ADKYTYAGDSLQASGQDLATEDYDYAYLHISAAAD 140 (186)
Q Consensus 106 ~~~y~~a~~~L~~a~~~l~~~~~~~a~~~lsaa~~ 140 (186)
.-+|+.++..|..|...+..+++......+..|.+
T Consensus 25 ~MLyeg~l~~l~~A~~aie~~~i~~k~~~i~ka~~ 59 (132)
T COG1516 25 LMLYEGALKFLKRAKEAIEQEDIEEKNESIDKAID 59 (132)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 45677777777777777777777766665555543
No 34
>PF07870 DUF1657: Protein of unknown function (DUF1657); InterPro: IPR012452 This domain appears to be restricted to the Bacillales.
Probab=42.38 E-value=71 Score=18.73 Aligned_cols=26 Identities=19% Similarity=0.279 Sum_probs=22.0
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHH
Q 029894 92 KTNDTTLKKVLKECADKYTYAGDSLQ 117 (186)
Q Consensus 92 ~~~~~~~~~al~~C~~~y~~a~~~L~ 117 (186)
.+.|+..+..+..|.+..+..+..|+
T Consensus 22 ~T~d~~AK~~y~~~a~~l~~ii~~L~ 47 (50)
T PF07870_consen 22 QTQDQEAKQMYEQAAQQLEEIIQDLE 47 (50)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHhH
Confidence 45688899999999999999888775
No 35
>PF02953 zf-Tim10_DDP: Tim10/DDP family zinc finger; InterPro: IPR004217 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a putative zinc binding domain with four conserved cysteine residues. Members of this family include subunits 8, 9, 10 and 13 of the mitochondrial inner membrane translocase complex, which are involved in mitochondrial protein import [, ]. Defects in TIM8 are the cause of 2 human syndromes: Mohr-Tranebjaerg syndrome (MTS) [MIM:304700]; also known as dystonia-deafness syndrome (DDS) or X-linked progressive deafness type 1 (DFN-1). It is a recessive neurodegenerative syndrome characterised by postlingual progressive sensorineural deafness as the first presenting symptom in early childhood, followed by progressive dystonia, spasticity, dysphagia, mental deterioration, paranoia and cortical blindness. Jensen syndrome [MIM:311150]; also known as opticoacoustic nerve atrophy with dementia. This X-linked disease is characterised by deafness, blindness and muscle weakness. The small alpha helical proteins Tim8 and Tim13 assemble into a hexameric complex which can bind Tim23 as its substrate and chaperone the hydrophobic Tim23 across the aqueous membrane space []. More information on zinc fingers can be found at Protein of the Month: Zinc Fingers [].; GO: 0006626 protein targeting to mitochondrion, 0045039 protein import into mitochondrial inner membrane, 0042719 mitochondrial intermembrane space protein transporter complex; PDB: 2BSK_B 3CJH_A 3DXR_A.
Probab=38.90 E-value=91 Score=19.00 Aligned_cols=29 Identities=17% Similarity=0.291 Sum_probs=22.4
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 029894 93 TNDTTLKKVLKECADKYTYAGDSLQASGQ 121 (186)
Q Consensus 93 ~~~~~~~~al~~C~~~y~~a~~~L~~a~~ 121 (186)
..+.....+++.|.+-|-++-..+.+.+.
T Consensus 36 ~L~~~E~~Ci~~C~~ky~~~~~~v~~~~~ 64 (66)
T PF02953_consen 36 SLSSKEESCIDNCVDKYIDTNQFVSKRFQ 64 (66)
T ss_dssp S--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44778899999999999998887776654
No 36
>PF02609 Exonuc_VII_S: Exonuclease VII small subunit; InterPro: IPR003761 Exonuclease VII is composed of two non-identical subunits; one large subunit and 4 small ones []. This enzyme catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield nucleoside 5'-phosphates.; GO: 0008855 exodeoxyribonuclease VII activity, 0006308 DNA catabolic process, 0009318 exodeoxyribonuclease VII complex; PDB: 1VP7_F.
Probab=35.00 E-value=73 Score=18.72 Aligned_cols=42 Identities=12% Similarity=0.226 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHhccCC--HHHHHHHHHHhccChhhHHHhhc
Q 029894 109 YTYAGDSLQASGQDLATED--YDYAYLHISAAADYPNACHNAFR 150 (186)
Q Consensus 109 y~~a~~~L~~a~~~l~~~~--~~~a~~~lsaa~~~~~tC~d~f~ 150 (186)
|+.++.+|+..+..|.+++ .+++.....-++.-...|.+-+.
T Consensus 1 fEe~~~~Le~Iv~~Le~~~~sLdes~~lyeeg~~l~~~c~~~L~ 44 (53)
T PF02609_consen 1 FEEAMERLEEIVEKLESGELSLDESLKLYEEGMELIKKCQERLE 44 (53)
T ss_dssp HHHHHHHHHHHHHHHHTT-S-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555556666666555442 34444444444444455554443
No 37
>PF02203 TarH: Tar ligand binding domain homologue; InterPro: IPR003122 Methyl-accepting chemotaxis proteins (MCPs) are a family of bacterial receptors that mediate chemotaxis to diverse signals, responding to changes in the concentration of attractants and repellents in the environment by altering swimming behaviour []. Environmental diversity gives rise to diversity in bacterial signalling receptors, and consequently there are many genes encoding MCPs []. For example, there are four well-characterised MCPs found in Escherichia coli: Tar (taxis towards aspartate and maltose, away from nickel and cobalt), Tsr (taxis towards serine, away from leucine, indole and weak acids), Trg (taxis towards galactose and ribose) and Tap (taxis towards dipeptides). MCPs share similar topology and signalling mechanisms. MCPs either bind ligands directly or interact with ligand-binding proteins, transducing the signal to downstream signalling proteins in the cytoplasm. MCPs undergo two covalent modifications: deamidation and reversible methylation at a number of glutamate residues. Attractants increase the level of methylation, while repellents decrease it. The methyl groups are added by the methyl-transferase cheR and are removed by the methylesterase cheB. Most MCPs are homodimers that contain the following organisation: an N-terminal signal sequence that acts as a transmembrane domain in the mature protein; a poorly-conserved periplasmic receptor (ligand-binding) domain; a second transmembrane domain; and a highly-conserved C-terminal cytoplasmic domain that interacts with downstream signalling components. The C-terminal domain contains the glycosylated glutamate residues. This entry represents the ligand-binding domain found in a number of methyl-accepting chemotaxis receptors.; GO: 0004888 transmembrane signaling receptor activity, 0006935 chemotaxis, 0007165 signal transduction, 0016020 membrane; PDB: 2ASR_A 3ATP_A 2D4U_A 2LIG_A 1VLS_A 1LIH_A 1WAT_B 1VLT_B 1WAS_A 1JMW_A.
Probab=32.20 E-value=1.9e+02 Score=20.68 Aligned_cols=60 Identities=8% Similarity=0.025 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHHHH-HHHHHHHHHHHhccCCHHHHHH
Q 029894 73 GFANATATSSYLSSQLLSTKTNDTTLKKVLKECADKYTY-AGDSLQASGQDLATEDYDYAYL 133 (186)
Q Consensus 73 a~~~a~~~~~~i~~~l~~~~~~~~~~~~al~~C~~~y~~-a~~~L~~a~~~l~~~~~~~a~~ 133 (186)
+.+....+...+.. +...+..++..+...+.-.+.|+. ....+......+..+|+.+...
T Consensus 87 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~al~~~d~~~~~~ 147 (171)
T PF02203_consen 87 AEQNLEQAEQAFDA-FKALPHASPEERALADELEASFDAYLQQALDPLLAALRAGDIAAFMQ 147 (171)
T ss_dssp HHHHHHHHHHHHHH-HHCS---GTGGHHHHHHHHHHHHH-HHHHHHHHHHHHHTT-HHHHHH
T ss_pred HHHHHHHHHHHHHH-HHccCCCCcchHHHHHHHHHHHHHHHHHhHHHHHHHHHCCCHHHHHH
Confidence 33344444444444 443344444667789999999998 6678899999998887765543
No 38
>PRK09634 nusB transcription antitermination protein NusB; Provisional
Probab=31.54 E-value=1.2e+02 Score=23.54 Aligned_cols=93 Identities=16% Similarity=0.097 Sum_probs=52.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHH-------HHhcC---CCCChhHHHHHHHHHHHHHHHHHHHHHHHH------Hh
Q 029894 60 VDTKGLANIMVGVGFANATATSSYLSS-------QLLST---KTNDTTLKKVLKECADKYTYAGDSLQASGQ------DL 123 (186)
Q Consensus 60 ~d~~~la~~ai~~a~~~a~~~~~~i~~-------~l~~~---~~~~~~~~~al~~C~~~y~~a~~~L~~a~~------~l 123 (186)
.+..+|...+++--..++.+++..... +++.. .+.-+..+.-+..|.+.-+.++..+..+.. ..
T Consensus 28 ~~~~~l~~~a~~~l~~~~~~~l~~~~~el~~~~~~l~~s~~~~~~~~~~r~~l~~~~~~~~~~~ng~s~~~~lp~ll~~~ 107 (207)
T PRK09634 28 LQLEELLLAAVRTLTQEVRETLDTAAAELERAQQRLLDSEGDASDLESARTMLQEALTLAETAINRLSAALELPELLQLA 107 (207)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHhC
Confidence 367778888887777777777655543 12221 112234455677777766666644333222 11
Q ss_pred c-cCCHHHHHHHHHHhccChhhHHHhhcCC
Q 029894 124 A-TEDYDYAYLHISAAADYPNACHNAFRRS 152 (186)
Q Consensus 124 ~-~~~~~~a~~~lsaa~~~~~tC~d~f~~~ 152 (186)
+ ..+...+...+.+++.+...++.-....
T Consensus 108 ~q~~~r~~a~~Lv~gvlr~~~~LD~iI~~~ 137 (207)
T PRK09634 108 DQEEVREYALERIGAVIRNRKEIDQLLDTV 137 (207)
T ss_pred CcHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 1 1223455566777777777777777774
No 39
>PF00737 PsbH: Photosystem II 10 kDa phosphoprotein; InterPro: IPR001056 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight phosphoprotein PsbH found in PSII. The phosphorylation site of PsbH is located in the N terminus, where reversible phosphorylation is light-dependent and redox-controlled. PsbH is necessary for the photoprotection of PSII, being required for: (1) the rapid degradation of photodamaged D1 core protein to prevent further oxidative damage to the PSII core, and (2) the insertion of newly synthesised D1 protein into the thylakoid membrane []. PsbH may also regulate the transfer of electrons from D2 (Qa) to D1 (Qb) in the reaction core.; GO: 0042301 phosphate ion binding, 0015979 photosynthesis, 0050821 protein stabilization, 0009523 photosystem II, 0016020 membrane; PDB: 3PRR_H 2AXT_h 3BZ2_H 3BZ1_H 4FBY_W 3PRQ_H 3KZI_H 1S5L_h 3A0H_H 3ARC_H ....
Probab=29.60 E-value=45 Score=19.83 Aligned_cols=20 Identities=35% Similarity=0.645 Sum_probs=11.0
Q ss_pred CCchhHHHHHHHHHHHHHHh
Q 029894 1 MGSSIFLFTLFIAFHLLIFR 20 (186)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~ 20 (186)
|+.....|++|++.++-|+.
T Consensus 28 M~~~m~lf~vfl~iiL~IyN 47 (52)
T PF00737_consen 28 MGVFMALFAVFLLIILEIYN 47 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 44455566656555555554
No 40
>PF14346 DUF4398: Domain of unknown function (DUF4398)
Probab=29.40 E-value=1.3e+02 Score=20.12 Aligned_cols=35 Identities=23% Similarity=0.191 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHhccCCHHHHHHHHHHhccCh
Q 029894 108 KYTYAGDSLQASGQDLATEDYDYAYLHISAAADYP 142 (186)
Q Consensus 108 ~y~~a~~~L~~a~~~l~~~~~~~a~~~lsaa~~~~ 142 (186)
.|..+-+.|..+...+..|+|..++....-|..+.
T Consensus 41 el~~A~~~L~~A~~a~~~~~y~~A~~~A~~A~~~A 75 (103)
T PF14346_consen 41 ELKEAREKLQRAKAALDDGDYERARRLAEQAQADA 75 (103)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 78889999999999999999999988776666543
No 41
>TIGR01601 PYST-C1 Plasmodium yoelii subtelomeric domain PYST-C1. The C-terminal portions of the genes which contain this domain are divergent and some contain other yoelii-specific paralogous domains such as PYST-C2 (TIGR01604).
Probab=28.82 E-value=22 Score=23.12 Aligned_cols=23 Identities=22% Similarity=0.336 Sum_probs=15.6
Q ss_pred CCchhHHHHHHHHHHHHHHhhCc
Q 029894 1 MGSSIFLFTLFIAFHLLIFRQQP 23 (186)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~ 23 (186)
|..|||.+.-.+|-.||...-++
T Consensus 1 MNkrIfslVcivlY~ll~v~ihC 23 (82)
T TIGR01601 1 MNKRIFSLVCIVLYILLAVSIHC 23 (82)
T ss_pred CCceEeehhHHHHHHHHheeeee
Confidence 88899887766666655555444
No 42
>TIGR01280 xseB exodeoxyribonuclease VII, small subunit. This protein is the small subunit for exodeoxyribonuclease VII. Exodeoxyribonuclease VII is made of a complex of four small subunits to one large subunit. The complex degrades single-stranded DNA into large acid-insoluble oligonucleotides. These nucleotides are then degraded further into acid-soluble oligonucleotides.
Probab=28.00 E-value=1.3e+02 Score=18.78 Aligned_cols=44 Identities=16% Similarity=0.213 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHhccCC--HHHHHHHHHHhccChhhHHHhhcCC
Q 029894 109 YTYAGDSLQASGQDLATED--YDYAYLHISAAADYPNACHNAFRRS 152 (186)
Q Consensus 109 y~~a~~~L~~a~~~l~~~~--~~~a~~~lsaa~~~~~tC~d~f~~~ 152 (186)
|+.++.+|+..+..|..++ .+++-..-..++.....|.+-+...
T Consensus 3 fEe~l~~Le~Iv~~LE~~~l~Leesl~lyeeG~~L~k~c~~~L~~a 48 (67)
T TIGR01280 3 FEEALSELEQIVQKLESGDLALEEALNLFERGMALARRCEKKLAQA 48 (67)
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6677777777777776654 4555555555666666676666553
No 43
>PF01540 Lipoprotein_7: Adhesin lipoprotein; InterPro: IPR002520 This family consists of the p50 and variable adherence-associated antigen (Vaa) adhesins from Mycoplasma hominis. M. hominis is a mycoplasma associated with human urogenital diseases, pneumonia, and septic arthritis []. An adhesin is a cell surface molecule that mediates adhesion to other cells or to the surrounding surface or substrate. The Vaa antigen is a 50kDa surface lipoprotein that has four tandem repetitive DNA sequences encoding a periodic peptide structure, and is highly immunogenic in the human host []. p50 is also a 50kDa lipoprotein, having three repeats A,B and C, that may be a tetramer of 191kDa in its native environment [].
Probab=27.26 E-value=2.4e+02 Score=23.04 Aligned_cols=27 Identities=22% Similarity=0.213 Sum_probs=20.5
Q ss_pred cCCHHHHHHHHHHhccChhhHHHhhcC
Q 029894 125 TEDYDYAYLHISAAADYPNACHNAFRR 151 (186)
Q Consensus 125 ~~~~~~a~~~lsaa~~~~~tC~d~f~~ 151 (186)
.|||+..-..||+|..+...=.....+
T Consensus 85 y~dypaiisklsaavenak~e~~~id~ 111 (353)
T PF01540_consen 85 YGDYPAIISKLSAAVENAKNEKKAIDD 111 (353)
T ss_pred cCCcHHHHHHHHHHHHhhhhhhhhhhh
Confidence 378999999999999887655555544
No 44
>PF05984 Cytomega_UL20A: Cytomegalovirus UL20A protein; InterPro: IPR009245 This family consists of several Cytomegalovirus UL20A proteins. UL20A is thought to be a glycoprotein [].
Probab=25.47 E-value=86 Score=20.69 Aligned_cols=24 Identities=25% Similarity=0.474 Sum_probs=15.2
Q ss_pred CCchhHHHHHHHHHHHHHHhhCccc
Q 029894 1 MGSSIFLFTLFIAFHLLIFRQQPSI 25 (186)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~ 25 (186)
|+.|..++.|+ ++.|.+-++.|++
T Consensus 1 MaRRlwiLslL-AVtLtVALAAPsQ 24 (100)
T PF05984_consen 1 MARRLWILSLL-AVTLTVALAAPSQ 24 (100)
T ss_pred CchhhHHHHHH-HHHHHHHhhcccc
Confidence 77787777644 4444566777754
No 45
>PF04108 APG17: Autophagy protein Apg17 ; InterPro: IPR007240 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells. In yeast, 15 Apg proteins coordinate the formation of autophagosomes. No molecule involved in autophagy has yet been identified in higher eukaryotes []. The pre-autophagosomal structure contains at least five Apg proteins: Apg1p, Apg2p, Apg5p, Aut7p/Apg8p and Apg16p. It is found in the vacuole []. The C-terminal glycine of Apg12p is conjugated to a lysine residue of Apg5p via an isopeptide bond. During autophagy, cytoplasmic components are enclosed in autophagosomes and delivered to lysosomes/vacuoles. Auotphagy protein 16 (Apg16) has been shown to be bind to Apg5 and is required for the function of the Apg12p-Apg5p conjugate []. Autophagy protein 5 (Apg5) is directly required for the import of aminopeptidase I via the cytoplasm-to-vacuole targeting pathway []. Autophagy protein 17 (Apg17) is required for activating Apg1 protein kinases. This entry also contains Autophagy protein 11 which is involved in cytoplasm to vacuole transport (Cvt) and pexophagy. ; GO: 0006914 autophagy
Probab=25.22 E-value=3.9e+02 Score=22.98 Aligned_cols=21 Identities=19% Similarity=0.382 Sum_probs=14.9
Q ss_pred HHHHHhccCCCccchHHhhcc
Q 029894 33 LIQKTCKNTKYYDLCVSSLKS 53 (186)
Q Consensus 33 ~i~~~C~~T~~~~~C~~~L~s 53 (186)
+++-.=.-|.|++.|+..+.-
T Consensus 208 ma~lL~sLt~HfDqC~~a~~~ 228 (412)
T PF04108_consen 208 MASLLESLTNHFDQCVTAVRH 228 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344444457799999999873
No 46
>PLN00055 photosystem II reaction center protein H; Provisional
Probab=24.45 E-value=56 Score=20.88 Aligned_cols=21 Identities=33% Similarity=0.716 Sum_probs=12.9
Q ss_pred CCchhHHHHHHHHHHHHHHhh
Q 029894 1 MGSSIFLFTLFIAFHLLIFRQ 21 (186)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~ 21 (186)
|+.....|++|++.+|-|+.+
T Consensus 43 Mg~~m~lf~vfl~iileiyNs 63 (73)
T PLN00055 43 MGVAMALFAVFLSIILEIYNS 63 (73)
T ss_pred HHHHHHHHHHHHHHHHHHhcc
Confidence 555666677666666655553
No 47
>PF08287 DASH_Spc19: Spc19; InterPro: IPR013251 Spc19 is a component of the DASH complex. The DASH complex associates with the spindle pole body and is important for spindle and kinetochore integrity during cell division [, ].
Probab=23.54 E-value=1.7e+02 Score=21.57 Aligned_cols=25 Identities=24% Similarity=0.312 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccC
Q 029894 102 LKECADKYTYAGDSLQASGQDLATE 126 (186)
Q Consensus 102 l~~C~~~y~~a~~~L~~a~~~l~~~ 126 (186)
|.+|...+..++..|+.+++-|..|
T Consensus 2 L~~cV~SL~~S~~lL~~Si~~L~~~ 26 (153)
T PF08287_consen 2 LSNCVSSLRSSVQLLQSSIETLDSG 26 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4556666666666666665555443
No 48
>CHL00066 psbH photosystem II protein H
Probab=23.54 E-value=61 Score=20.71 Aligned_cols=21 Identities=33% Similarity=0.716 Sum_probs=12.8
Q ss_pred CCchhHHHHHHHHHHHHHHhh
Q 029894 1 MGSSIFLFTLFIAFHLLIFRQ 21 (186)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~ 21 (186)
|+.....|++|++.+|-|+.+
T Consensus 43 Mgv~m~lf~vfl~iiLeiyNs 63 (73)
T CHL00066 43 MGVAMALFAVFLSIILEIYNS 63 (73)
T ss_pred HHHHHHHHHHHHHHHHHHhCc
Confidence 555666666666666655543
No 49
>PRK00977 exodeoxyribonuclease VII small subunit; Provisional
Probab=22.87 E-value=1.7e+02 Score=18.91 Aligned_cols=45 Identities=11% Similarity=0.221 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHhccCC--HHHHHHHHHHhccChhhHHHhhcCC
Q 029894 108 KYTYAGDSLQASGQDLATED--YDYAYLHISAAADYPNACHNAFRRS 152 (186)
Q Consensus 108 ~y~~a~~~L~~a~~~l~~~~--~~~a~~~lsaa~~~~~tC~d~f~~~ 152 (186)
.|+.++.+|+..+..|..|+ .+++-.....++.....|..-+...
T Consensus 11 sfEea~~~LEeIv~~LE~~~l~Lees~~lyeeg~~L~k~C~~~L~~a 57 (80)
T PRK00977 11 SFEEALAELEEIVTRLESGDLPLEESLAAFERGVALARQCQKKLQQA 57 (80)
T ss_pred CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47777777777777777664 4555555566666667777666554
No 50
>cd02337 ZZ_CBP Zinc finger, ZZ type. Zinc finger present in CBP/p300 and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. CREB-binding protein (CBP) is a large multidomain protein that provides binding sites for transcriptional coactivators, the role of the ZZ domain in CBP/p300 is unclear.
Probab=21.80 E-value=67 Score=17.96 Aligned_cols=22 Identities=23% Similarity=0.596 Sum_probs=18.4
Q ss_pred HHHHhccCCCccchHHhhccCC
Q 029894 34 IQKTCKNTKYYDLCVSSLKSNP 55 (186)
Q Consensus 34 i~~~C~~T~~~~~C~~~L~s~p 55 (186)
...-|...+++++|.+.+.+..
T Consensus 12 ~r~~C~~C~dfDLC~~C~~~~~ 33 (41)
T cd02337 12 TRWHCTVCEDYDLCITCYNTKN 33 (41)
T ss_pred CceECCCCcchhhHHHHhCCCC
Confidence 5667899999999999997743
No 51
>PF03058 Sar8_2: Sar8.2 family; InterPro: IPR004297 Members of this family are found in Solanaceae spp. plants, a taxonomic group (family) that includes pepper and tobacco plant species. Synthesis of these proteins is induced by Tobacco mosaic virus and salicylic acid []; indeed they are thought to be involved in the development of systemic acquired resistance (SAR) after an initial hypersensitive response to microbial infection [, ]. SAR is characterised by long-lasting resistance to infection by a wide range of pathogens, extending to plant tissues distant from the initial infection site [].
Probab=21.59 E-value=1e+02 Score=20.61 Aligned_cols=23 Identities=26% Similarity=0.170 Sum_probs=17.5
Q ss_pred CCchhHHHHHHHHHHHHHHhhCc
Q 029894 1 MGSSIFLFTLFIAFHLLIFRQQP 23 (186)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~ 23 (186)
|.+.-.+|+-+.|+++++..++.
T Consensus 1 M~~Ktnlfl~lSLailLmIISSq 23 (93)
T PF03058_consen 1 MVSKTNLFLCLSLAILLMIISSQ 23 (93)
T ss_pred CcchhhhHHHHHHHHHHHHHhhH
Confidence 77888888888887777776665
No 52
>TIGR03504 FimV_Cterm FimV C-terminal domain. This protein is found at the extreme C-terminus of FimV from Pseudomonas aeruginosa, and of TspA of Neisseria meningitidis. Disruption of the former blocks twitching motility from type IV pili; Semmler, et al. suggest a role in peptidoglycan layer remodelling required by type IV fimbrial systems.
Probab=21.56 E-value=1.4e+02 Score=16.92 Aligned_cols=25 Identities=12% Similarity=0.089 Sum_probs=19.3
Q ss_pred HHHHHHHhccCCHHHHHHHHHHhcc
Q 029894 116 LQASGQDLATEDYDYAYLHISAAAD 140 (186)
Q Consensus 116 L~~a~~~l~~~~~~~a~~~lsaa~~ 140 (186)
|.-|...+..||++.|+.+|..++.
T Consensus 3 LdLA~ayie~Gd~e~Ar~lL~evl~ 27 (44)
T TIGR03504 3 LDLARAYIEMGDLEGARELLEEVIE 27 (44)
T ss_pred hHHHHHHHHcCChHHHHHHHHHHHH
Confidence 4446667778899999999888774
No 53
>PRK14066 exodeoxyribonuclease VII small subunit; Provisional
Probab=20.73 E-value=2.1e+02 Score=18.33 Aligned_cols=44 Identities=14% Similarity=0.190 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHhccCC--HHHHHHHHHHhccChhhHHHhhcC
Q 029894 108 KYTYAGDSLQASGQDLATED--YDYAYLHISAAADYPNACHNAFRR 151 (186)
Q Consensus 108 ~y~~a~~~L~~a~~~l~~~~--~~~a~~~lsaa~~~~~tC~d~f~~ 151 (186)
.|+.++.+|++.+..|..|+ .+++-..-..++.-...|...+..
T Consensus 5 ~fEeal~~LE~IV~~LE~g~l~Leesl~lyeeG~~L~k~C~~~L~~ 50 (75)
T PRK14066 5 KFETALKKLEEVVKKLEGGELSLDDSLKAFEEGVKHAAFCSKKLDE 50 (75)
T ss_pred cHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36666666666666666654 344444444455555556555544
No 54
>COG1722 XseB Exonuclease VII small subunit [DNA replication, recombination, and repair]
Probab=20.42 E-value=2.4e+02 Score=18.37 Aligned_cols=45 Identities=11% Similarity=0.211 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHhccCC--HHHHHHHHHHhccChhhHHHhhcCC
Q 029894 108 KYTYAGDSLQASGQDLATED--YDYAYLHISAAADYPNACHNAFRRS 152 (186)
Q Consensus 108 ~y~~a~~~L~~a~~~l~~~~--~~~a~~~lsaa~~~~~tC~d~f~~~ 152 (186)
.|..++.+|++.+..|.+|+ .+++......++.....|..-+...
T Consensus 11 sfE~~l~eLE~IV~~LE~Gel~Le~sl~~~erG~~L~k~c~~~L~~A 57 (81)
T COG1722 11 SFEEALAELEEIVESLESGELPLEEALKEFERGMALYKECQEKLQQA 57 (81)
T ss_pred hHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57777777877777777764 4566666666666777777776554
No 55
>PRK14064 exodeoxyribonuclease VII small subunit; Provisional
Probab=20.10 E-value=2.2e+02 Score=18.22 Aligned_cols=45 Identities=9% Similarity=0.171 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHhccCC--HHHHHHHHHHhccChhhHHHhhcCC
Q 029894 108 KYTYAGDSLQASGQDLATED--YDYAYLHISAAADYPNACHNAFRRS 152 (186)
Q Consensus 108 ~y~~a~~~L~~a~~~l~~~~--~~~a~~~lsaa~~~~~tC~d~f~~~ 152 (186)
.|+.++.+|+..+..|..|+ .+++-..-..++.-...|.+-+...
T Consensus 7 sfEe~l~~LE~IV~~LE~~~l~Leesl~~ye~G~~L~k~c~~~L~~a 53 (75)
T PRK14064 7 TFEEAIAELETIVEALENGSASLEDSLDMYQKGIELTKLCQDKLQSA 53 (75)
T ss_pred CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46666777777777776653 3455555555555556666666543
Done!