BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029896
(185 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8W4F1|PAP10_ARATH Probable plastid-lipid-associated protein 10, chloroplastic
OS=Arabidopsis thaliana GN=PAP10 PE=1 SV=1
Length = 284
Score = 325 bits (834), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 154/184 (83%), Positives = 174/184 (94%)
Query: 2 GEPIDLVKLDGTWRLQYTSAPDVLVLFEAAARLPFFKVGQIFQKFECRDKSDGGVICNVV 61
GE ID VKLDGTWRLQYTSAPDV+VLFEAA+RLPFF+VGQ+FQKFECRD+SDGG+I NVV
Sbjct: 101 GEEIDPVKLDGTWRLQYTSAPDVVVLFEAASRLPFFQVGQVFQKFECRDRSDGGIIRNVV 160
Query: 62 RWSVPPLLEKEEGATLVVSAKFDVVSVRNIYLQFEEVTVQNIYISEELQALIAPAILPRS 121
+WS+P LLE++EGATLVV+AKFD VS RNIYLQFEE++V+NI I+E+LQALIAPAILPRS
Sbjct: 161 QWSLPSLLEEQEGATLVVTAKFDKVSSRNIYLQFEEISVRNININEQLQALIAPAILPRS 220
Query: 122 FLSLQILQFIRAFKAQIPVTNTTPGRRSVGGLYYLSYLDNNMLLGRAVGGGGVFVFTKAQ 181
FLSLQ+LQFIR FKAQIPV T+PGRRSVGGLYYLSYLDNNMLLGR+VGGGGVFVFTK+Q
Sbjct: 221 FLSLQLLQFIRTFKAQIPVNATSPGRRSVGGLYYLSYLDNNMLLGRSVGGGGVFVFTKSQ 280
Query: 182 PLEL 185
PLEL
Sbjct: 281 PLEL 284
>sp|O82291|PAP3_ARATH Probable plastid-lipid-associated protein 3, chloroplastic
OS=Arabidopsis thaliana GN=PAP3 PE=1 SV=1
Length = 376
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 24/181 (13%)
Query: 10 LDGTWRLQYTSAPDVLVLFEAAARLPFFKVGQIFQKFECRDKSDGGVICNVVRWSVPPLL 69
LDG W L YT+ +++ L AA P KV I Q + + +I N S P
Sbjct: 201 LDGNWVLLYTAFSELIPLL-AAGSTPLLKVKSISQSIDTNNL----IIDNSTTLSSP--- 252
Query: 70 EKEEGATLVVSAKFDVVSVRNIYLQFEEVTVQNIYISEELQ---------ALIAPAILPR 120
+ +A F+V S I + F+E T++ I + I+ ++L +
Sbjct: 253 --FADFSFSATASFEVRSPSRIEVSFKEGTLKPPVIKSSVDLPESVGVFGQQISLSLLKQ 310
Query: 121 SFLSLQIL--QFIRAFKAQIPVTNTTPGRRSVGGLYYLSYLDNNMLLGRAVGGGGVFVFT 178
S LQ + RA Q P+ PG R L +YLD ++ + R G GG+FV
Sbjct: 311 SLNPLQDVAANISRALSGQPPLKLPFPGNRGSSWLLT-TYLDKDLRISR--GDGGLFVLA 367
Query: 179 K 179
+
Sbjct: 368 R 368
>sp|Q94KU5|PAP3_BRACM Plastid lipid-associated protein 3, chloroplastic OS=Brassica
campestris GN=PAP3 PE=2 SV=1
Length = 360
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 80/182 (43%), Gaps = 26/182 (14%)
Query: 10 LDGTWRLQYTSAPDVLVLFEAAARLPFFKVGQIFQKFECRDKSDGGVICNVVRWSVPPLL 69
LDG W L YT+ ++L L AA P KV I Q + + S I N S P
Sbjct: 185 LDGNWVLLYTAFSELLPLL-AAGSTPLLKVKSISQSIDTKSLS----IDNSTTLSSP--- 236
Query: 70 EKEEGATLVVSAKFDVVSVRNIYLQFEEVTVQNIYISEELQALIAPAILPR----SFL-- 123
+ +A F+V + I + F+E T++ I + + + + SFL
Sbjct: 237 --FADFSFSATASFEVRTPSRIEVSFKEGTLKPPEIKSSVDLPESVGVFGQEINLSFLKQ 294
Query: 124 SLQILQFI-----RAFKAQIPVTNTTPGRRSVGGLYYL-SYLDNNMLLGRAVGGGGVFVF 177
SL LQ + RA Q P+ PG R G + L +YLD ++ + R G GG+FV
Sbjct: 295 SLNPLQDVAANISRAISGQPPLKLPFPGNR--GSSWLLTTYLDKDLRISR--GDGGLFVL 350
Query: 178 TK 179
+
Sbjct: 351 AR 352
>sp|Q9LW57|PAP6_ARATH Probable plastid-lipid-associated protein 6, chloroplastic
OS=Arabidopsis thaliana GN=PAP6 PE=1 SV=1
Length = 284
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 77/182 (42%), Gaps = 40/182 (21%)
Query: 2 GEPIDLV----KLDGTWRLQYTSAPDVLVLFEAAARLPFFK-----VGQIFQKFECRDKS 52
G P+DL KL G WRL Y+SA L + LP + +GQ+FQ+ + K
Sbjct: 123 GGPVDLTDDLDKLQGKWRLLYSSAFSSRSLGGSRPGLPTGRLIPVTLGQVFQRIDVFSK- 181
Query: 53 DGGVICNV---VRWSVPPLLEKEEGATLVVSAKFDVVSVRNIYLQFEEVTVQNIYISEEL 109
D I V W PPL AT ++ KF+++ I + FE+ TV+ ++
Sbjct: 182 DFDNIAEVELGAPWPFPPL-----EATATLAHKFELLGTCKIKITFEKTTVKTSGNLSQI 236
Query: 110 QALIAPAILPRSFLSLQILQFIRAFKAQIPVTNTTPGRRSVGGLYYLSYLDNNMLLGRAV 169
P LP SF P +N PG G + ++Y+D+ M + R
Sbjct: 237 PPFDIPR-LPDSFR---------------PSSN--PGT----GDFEVTYVDDTMRITRGD 274
Query: 170 GG 171
G
Sbjct: 275 RG 276
>sp|Q7XBW5|PAP3_ORYSJ Probable plastid-lipid-associated protein 3, chloroplastic OS=Oryza
sativa subsp. japonica GN=PAP3 PE=3 SV=1
Length = 374
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 79/190 (41%), Gaps = 26/190 (13%)
Query: 3 EPIDLVKL-DGTWRLQYTSAPDVLVLFEAAARLPFFKVGQIFQKFECRDKSDGGVICNVV 61
EP+ L G W L YT+ ++L + A P FKV +I Q+ + + I N
Sbjct: 189 EPVQATHLLAGNWILIYTAYSELLPILAVGA-APLFKVDEISQEIDTNSMT----IVNAS 243
Query: 62 RWSVPPLLEKEEGATLVVSAKFDVVSVRNIYLQFEEVTVQNIYISEELQALIAPAILPRS 121
+ + +A FDV S I +QF+E + Q IS + L A +
Sbjct: 244 T-----ISSPFASFSFSATASFDVQSPSRIEVQFKEGSFQPPKISSSVD-LPAEVDIFGQ 297
Query: 122 FLSLQILQFI-----RAFKA-------QIPVTNTTPGRRSVGGLYYLSYLDNNMLLGRAV 169
+SL +Q + +AF + Q P+ PG +YLD ++ + R
Sbjct: 298 KISLGPVQQVLNPLQQAFASIAGSISGQPPLKLPIPGNNRARSWLLTTYLDKDLRISR-- 355
Query: 170 GGGGVFVFTK 179
G GG+F+ K
Sbjct: 356 GDGGLFILVK 365
>sp|Q9ZP40|PG1_PEA Plastoglobulin-1, chloroplastic OS=Pisum sativum GN=PG1 PE=1 SV=1
Length = 358
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 24/181 (13%)
Query: 10 LDGTWRLQYTSAPDVLVLFEAAARLPFFKVGQIFQKFECRDKSDGGVICNVVRWSVPPLL 69
L+G W L YT++ ++L L AA LP K+ +I Q + D + N L
Sbjct: 183 LNGNWVLLYTASSELLPLL-AAGSLPLLKLDKISQTIDT----DSFTVVNSTT-----LS 232
Query: 70 EKEEGATLVVSAKFDVVSVRNIYLQFEEVTVQNIYISEEL-----------QALIAPAIL 118
+ VSA F+V S I + F+E ++Q I ++ Q + P +
Sbjct: 233 SPFASFSFSVSASFEVRSPTRIQVTFKEGSLQPPEIKSKIDLPENINIFGQQLSLGPLLQ 292
Query: 119 PRSFLSLQILQFIRAFKAQIPVTNTTPGRRSVGGLYYLSYLDNNMLLGRAVGGGGVFVFT 178
L + R Q P+ PG R+ L +YLD ++ + R G GG+FV
Sbjct: 293 SLGPLENVVANISRVISGQSPLKIPIPGERTSSWLIT-TYLDKDLRISR--GDGGLFVLA 349
Query: 179 K 179
+
Sbjct: 350 R 350
>sp|Q94FZ9|PAP1_BRACM Plastid lipid-associated protein 1, chloroplastic OS=Brassica
campestris GN=PAP1 PE=1 SV=1
Length = 327
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 27/183 (14%)
Query: 10 LDGTWRLQYTSAPDVLVLFEAAARL--PFFKVGQIFQKFECRDKSDGGVICNVVRWSVPP 67
L+G W L YTS + LF +R P KV +I Q + SD + N VR++ P
Sbjct: 151 LNGKWILVYTS---FVGLFPLLSRRISPLVKVDEISQTID----SDSFTVHNSVRFASP- 202
Query: 68 LLEKEEGATLVVSAKFDVVSVRNIYLQFEEVTV------QNIYISEELQAL-----IAPA 116
+L +AKF+V S + + ++FE+ + +I I E ++ L + P
Sbjct: 203 ----LATTSLSTNAKFEVRSPKRVQVKFEQGVIGTPQLTDSIEIPEFVEVLGQKIDLNPI 258
Query: 117 ILPRSFLSLQILQFIRAFKAQIPVTNTTPGRRSVGGLYYLSYLDNNMLLGRAVGGGGVFV 176
+ + R +Q P+ + PG S +YLD ++ + R GG VFV
Sbjct: 259 KGLLTSVQDTASSVARTISSQPPLKFSLPG-DSAQSWLLTTYLDKDLRISRG-DGGSVFV 316
Query: 177 FTK 179
+
Sbjct: 317 LIR 319
>sp|Q94KU6|PAP2_BRACM Plastid lipid-associated protein 2, chloroplastic OS=Brassica
campestris GN=PAP2 PE=1 SV=1
Length = 319
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 28/190 (14%)
Query: 4 PID-LVKLDGTWRLQYTSAPDVLVLFEAAAR--LPFFKVGQIFQKFECRDKSDGGVICNV 60
P D L L+G W L YTS + LF +R +P KV +I Q + SD + N
Sbjct: 136 PTDALFLLNGKWILAYTS---FVGLFPLLSRGIVPLVKVDEISQTID----SDNFTVENS 188
Query: 61 VRWSVPPLLEKEEGATLVVSAKFDVVSVRNIYLQFEEVTV------QNIYISEELQALIA 114
V ++ P ++ +AKF++ S + + ++FEE + +I I E ++ L
Sbjct: 189 VLFAGP-----LATTSISTNAKFEIRSPKRVQIKFEEGVIGTPQLTDSIEIPEYVEFLGQ 243
Query: 115 PAILP--RSFL-SLQ--ILQFIRAFKAQIPVTNTTPGRRSVGGLYYLSYLDNNMLLGRAV 169
L R L S+Q R +Q P+ + PG S +YLD ++ + R
Sbjct: 244 KIDLTPIRGLLTSVQDTATSVARTISSQPPLKFSLPG-DSAQSWLLTTYLDKDIRISRG- 301
Query: 170 GGGGVFVFTK 179
GG VFV K
Sbjct: 302 DGGSVFVLIK 311
>sp|O49629|PAP2_ARATH Probable plastid-lipid-associated protein 2, chloroplastic
OS=Arabidopsis thaliana GN=PAP2 PE=1 SV=1
Length = 310
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 27/183 (14%)
Query: 10 LDGTWRLQYTSAPDVLVLFEAAAR--LPFFKVGQIFQKFECRDKSDGGVICNVVRWSVPP 67
L+G W L YTS + LF +R +P KV +I Q + SD + N VR++ P
Sbjct: 134 LNGKWILAYTS---FVNLFPLLSRGIVPLIKVDEISQTID----SDNFTVQNSVRFAGP- 185
Query: 68 LLEKEEGATLVVSAKFDVVSVRNIYLQFEEVTV------QNIYISEELQALIAPAILP-- 119
++ +AKF++ S + + ++FE+ + +I I E ++ L L
Sbjct: 186 ----LGTNSISTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIPEYVEVLGQKIDLNPI 241
Query: 120 RSFL-SLQ--ILQFIRAFKAQIPVTNTTPGRRSVGGLYYLSYLDNNMLLGRAVGGGGVFV 176
R L S+Q R +Q P+ + P + L +YLD ++ + R GG VFV
Sbjct: 242 RGLLTSVQDTASSVARTISSQPPLKFSLPADNAQSWLLT-TYLDKDIRISRG-DGGSVFV 299
Query: 177 FTK 179
K
Sbjct: 300 LIK 302
>sp|Q96398|CHRC_CUCSA Chromoplast-specific carotenoid-associated protein, chromoplast
OS=Cucumis sativus GN=CHRC PE=1 SV=1
Length = 322
Score = 37.7 bits (86), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 77/184 (41%), Gaps = 24/184 (13%)
Query: 7 LVKLDGTWRLQYTSAPDVLVLFEAAARLPFFKVGQIFQKFECRDKSDGGVICNVVRWSVP 66
L L+G W L YT+ + L + LP KV +I Q + S+ + N V++S P
Sbjct: 144 LTLLNGKWILAYTTFAGLFPLL--SRNLPLVKVEEISQTID----SENLTVQNSVQFSGP 197
Query: 67 PLLEKEEGATLVVSAKFDVVSVRNIYLQFEEVTV------QNIYISEELQAL-----IAP 115
++ +AKF+V S ++++FEE + +I I + + L P
Sbjct: 198 -----LATTSITTNAKFEVRSPLRVHIKFEEGVIGTPQLTDSIVIPDNVDFLGQKIDFTP 252
Query: 116 AILPRSFLSLQILQFIRAFKAQIPVTNTTPGRRSVGGLYYLSYLDNNMLLGRAVGGGGVF 175
S L + +Q P+ + R V +YLD ++ + R GG VF
Sbjct: 253 FNGIISSLQDTASNVAKTISSQPPIKFSISNTR-VESWLLTTYLDEDLRISRG-DGGSVF 310
Query: 176 VFTK 179
V K
Sbjct: 311 VLLK 314
>sp|O81439|PAP1_ARATH Probable plastid-lipid-associated protein 1, chloroplastic
OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1
Length = 318
Score = 37.4 bits (85), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 78/183 (42%), Gaps = 27/183 (14%)
Query: 10 LDGTWRLQYTSAPDVLVLFEAAARL--PFFKVGQIFQKFECRDKSDGGVICNVVRWSVPP 67
L+G W L YTS + LF +R P KV +I Q + SD + N VR++ P
Sbjct: 142 LNGKWILAYTS---FVGLFPLLSRRIEPLVKVDEISQTID----SDSFTVQNSVRFAGP- 193
Query: 68 LLEKEEGATLVVSAKFDVVSVRNIYLQFEEVTV------QNIYISEELQAL-----IAPA 116
+ +AKF++ S + + ++FE+ + +I I E ++ L + P
Sbjct: 194 ----FSTTSFSTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIPESVEVLGQKIDLNPI 249
Query: 117 ILPRSFLSLQILQFIRAFKAQIPVTNTTPGRRSVGGLYYLSYLDNNMLLGRAVGGGGVFV 176
+ + R Q P+ + P + L +YLD ++ + R GG V+V
Sbjct: 250 KGLLTSVQDTASSVARTISNQPPLKFSLPSDNTQSWLLT-TYLDKDLRISRG-DGGSVYV 307
Query: 177 FTK 179
K
Sbjct: 308 LIK 310
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 34.7 bits (78), Expect = 0.35, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 9/125 (7%)
Query: 17 QYTSAPDVLVLFEAAARLPFFKVGQIFQKFECRDKSDGGVICNVVRWSVPPLLEKEEGAT 76
+Y A +++ E A P ++ ++ R + GG++ N + VPP + E
Sbjct: 1509 RYCKAHNLMWHQEFATEHPVQELERLLSAVLIRHQYLGGLVLNALETEVPPPRQLGEIIR 1568
Query: 77 LVVSAKFDVVSVR-NIYLQFEEVTVQNIYISEELQAL---IAPAILP--RSFLSLQILQF 130
LV AK+ VV R + ++EV I E L+ L + PAI P R L ILQ
Sbjct: 1569 LVHQAKWSVVRTRQQLNRSYKEVCAP---ILERLRFLLYEVRPAISPQQRGLRRLPILQR 1625
Query: 131 IRAFK 135
FK
Sbjct: 1626 PPRFK 1630
>sp|Q9ZWQ8|PAP_CITUN Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu
GN=PAP PE=2 SV=1
Length = 323
Score = 34.7 bits (78), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 35/190 (18%)
Query: 7 LVKLDGTWRLQYTSAPDVLVLFEAAARLPFFKVGQIFQKFECRDKSDGGVICNVVRWSVP 66
L L+ W L YTS + L + LP +V +I Q + S+ + N ++++ P
Sbjct: 144 LTLLNAKWILVYTSFSGLFPLL-SRGTLPLARVEEISQTID----SENFTVQNSIQFAGP 198
Query: 67 PLLEKEEGATLVVSAKFDVVSVRNIYLQFEEVTVQNIYISEELQALIAPAILPRS--FLS 124
++ +AKF+V S + + ++FEE + +++ L +LP + FL
Sbjct: 199 -----LATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSL-------VLPENVEFLG 246
Query: 125 LQ--------ILQFIRAFKAQIP--VTNTTPGRRSVGGLYYLS-----YLDNNMLLGRAV 169
+ IL ++ + + +++ P + S+ S YLD ++ + RA
Sbjct: 247 QKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRA- 305
Query: 170 GGGGVFVFTK 179
G VFVF K
Sbjct: 306 DAGSVFVFIK 315
>sp|Q6K439|PAP2_ORYSJ Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=PAP2 PE=2 SV=1
Length = 319
Score = 33.9 bits (76), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 80/194 (41%), Gaps = 42/194 (21%)
Query: 7 LVKLDGTWRLQYTSAPDVLVLFEAAARLPFFKVGQIFQKFECRDKSDGGVICNVVRWSVP 66
L L+G W L YTS + L + + KV +I Q + S+ + N +++S P
Sbjct: 140 LTLLNGKWILAYTSFSQLFPLLGSGSLPQLVKVEEISQTID----SENFTVQNCIKFSGP 195
Query: 67 PLLEKEEGATLVVS--AKFDVVSVRNIYLQFEEVTVQNIYISEELQALIAPAILPRSF-- 122
AT VS AKF+V S + + ++F+E + +++ + +LP F
Sbjct: 196 -------LATTSVSTNAKFEVRSPKRVQIKFDEGIIGTPQLTDSI-------VLPEKFEL 241
Query: 123 ----LSLQILQFI------------RAFKAQIPVTNTTPGRRSVGGLYYL-SYLDNNMLL 165
+ L L+ I R Q P+ P R + L +YLD+ + +
Sbjct: 242 FGQNIDLTPLKGIFSSIENAASSVARTISGQPPL--KIPIRTDNAESWLLTTYLDDELRI 299
Query: 166 GRAVGGGGVFVFTK 179
R G +FV K
Sbjct: 300 SRG-DGSSIFVLFK 312
>sp|P80471|LIPC_SOLTU Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2
Length = 326
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 7 LVKLDGTWRLQYTSAPDVLVLFEAAARLPFFKVGQIFQKFECRDKSDGGVICNVVRWSVP 66
L L+G W L YTS + L + LP +V +I Q + S+ + N V ++ P
Sbjct: 147 LTLLNGKWILAYTSFSGLFPLL-SRGNLPLVRVEEISQTID----SESFTVQNSVVFAGP 201
Query: 67 PLLEKEEGATLVVSAKFDVVSVRNIYLQFEE 97
++ +AKF+V S + + ++FEE
Sbjct: 202 -----LATTSISTNAKFEVRSPKRVQIKFEE 227
>sp|O99019|LIPC_SOLDE Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1
Length = 326
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 7 LVKLDGTWRLQYTSAPDVLVLFEAAARLPFFKVGQIFQKFECRDKSDGGVICNVVRWSVP 66
L L+G W L YTS + L + LP +V +I Q + S+ + N V ++ P
Sbjct: 147 LTLLNGKWILAYTSFSGLFPLL-SRGNLPLVRVEEISQTID----SESFTVQNSVVFAGP 201
Query: 67 PLLEKEEGATLVVSAKFDVVSVRNIYLQFEE 97
++ +AKF+V S + + ++FEE
Sbjct: 202 -----LATTSISTNAKFEVRSPKRVQIKFEE 227
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.141 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,049,544
Number of Sequences: 539616
Number of extensions: 2490409
Number of successful extensions: 4667
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 4659
Number of HSP's gapped (non-prelim): 21
length of query: 185
length of database: 191,569,459
effective HSP length: 110
effective length of query: 75
effective length of database: 132,211,699
effective search space: 9915877425
effective search space used: 9915877425
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)