BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029897
(185 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449438769|ref|XP_004137160.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 196
Score = 287 bits (734), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 138/196 (70%), Positives = 157/196 (80%), Gaps = 11/196 (5%)
Query: 1 MEGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA 60
ME DD+DMI ++ ELDDMK RLK+ME+EA ALR+M AKV EM+S QDPA+ +S A
Sbjct: 1 MEHDDVDMIGSDANDAELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAASQA 60
Query: 61 NREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEA 109
NREEVDSRSVFVGN QHFQSCGTVNR+TIRTDKFGQPKGYAYVEF++ EA
Sbjct: 61 NREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEA 120
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGY 169
VQEAL LNESELHGRQLKVT KRTN+PGMKQ+RPRR NPFM +SR + P+ +SPYGY
Sbjct: 121 VQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGY 180
Query: 170 GKIPRFRMPMRYSPYY 185
GK+PRFRMP RY PYY
Sbjct: 181 GKVPRFRMPTRYGPYY 196
>gi|449523199|ref|XP_004168611.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 196
Score = 284 bits (727), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 137/196 (69%), Positives = 156/196 (79%), Gaps = 11/196 (5%)
Query: 1 MEGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA 60
ME DD+DMI ++ ELDDMK RLK+ME+EA ALR+M AKV EM+S QDPA+ +S A
Sbjct: 1 MEHDDVDMIGSDANDAELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAASQA 60
Query: 61 NREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEA 109
NREEVDSRSVFVGN QHFQSCGTVNR+TIRTDKFGQPKGYAYVEF++ EA
Sbjct: 61 NREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEA 120
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGY 169
VQEAL LNESELHGRQLKVT RTN+PGMKQ+RPRR NPFM +SR + P+ +SPYGY
Sbjct: 121 VQEALLLNESELHGRQLKVTAMRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGY 180
Query: 170 GKIPRFRMPMRYSPYY 185
GK+PRFRMP RY PYY
Sbjct: 181 GKVPRFRMPTRYGPYY 196
>gi|255569758|ref|XP_002525843.1| poly-A binding protein, putative [Ricinus communis]
gi|223534848|gb|EEF36537.1| poly-A binding protein, putative [Ricinus communis]
Length = 198
Score = 284 bits (726), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 144/198 (72%), Positives = 157/198 (79%), Gaps = 15/198 (7%)
Query: 1 MEGDDMDMIETENKQ---VELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS 57
MEG+DM M TE + ELDDMK RLKEME+EA ALR+M AKV EM S QDP A S
Sbjct: 1 MEGEDMVMDGTEINEEEVPELDDMKKRLKEMEDEAAALREMQAKVEKEMGSSQDPTAAAS 60
Query: 58 SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQ 106
ANREEVDSRSVFVGN QHFQSCGTVNR+TIRTDK+GQPKGYAYVEFL+
Sbjct: 61 Q-ANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKYGQPKGYAYVEFLE 119
Query: 107 SEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSP 166
EAVQEAL LNESELHGRQLKVT KRTNVPGMKQ RPRRPNP+M + RG+ +PP+ YSP
Sbjct: 120 PEAVQEALLLNESELHGRQLKVTAKRTNVPGMKQFRPRRPNPYMGFAPRGSQLPPYFYSP 179
Query: 167 YGYGKIPRFRMPMRYSPY 184
YGYGK+PRFRMPMRYSPY
Sbjct: 180 YGYGKVPRFRMPMRYSPY 197
>gi|224140775|ref|XP_002323754.1| predicted protein [Populus trichocarpa]
gi|222866756|gb|EEF03887.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/198 (69%), Positives = 159/198 (80%), Gaps = 14/198 (7%)
Query: 1 MEGDDMDM--IETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS- 57
M+GDD+DM +ET ELDDMK RLKEME+EA ALR+M AKV EM S QDP+A +
Sbjct: 1 MDGDDVDMAAVETAEAVPELDDMKKRLKEMEDEAAALREMQAKVEKEMGSVQDPSASATA 60
Query: 58 SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQ 106
S AN+EEVDSRSVFVGN QHFQ+CGTVNRVTIR+DK+GQPKGYAYVEF++
Sbjct: 61 SQANKEEVDSRSVFVGNVDYACTPEEVQQHFQACGTVNRVTIRSDKYGQPKGYAYVEFVE 120
Query: 107 SEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSP 166
EAVQEAL LNESELHGRQLKVT KRTNVPGMKQ R RRP+P+M + R AI+PP+L+SP
Sbjct: 121 PEAVQEALLLNESELHGRQLKVTAKRTNVPGMKQFRARRPSPYMGFPPRAAIMPPYLFSP 180
Query: 167 YGYGKIPRFRMPMRYSPY 184
YGYGK+ R+RMPMRYSPY
Sbjct: 181 YGYGKVMRYRMPMRYSPY 198
>gi|358248734|ref|NP_001239931.1| uncharacterized protein LOC100791351 [Glycine max]
gi|255647673|gb|ACU24298.1| unknown [Glycine max]
Length = 197
Score = 276 bits (705), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 140/198 (70%), Positives = 156/198 (78%), Gaps = 14/198 (7%)
Query: 1 MEGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA 60
ME DD+DM + + ELDDMK RLKEME+EA ALR+M AKV EM S QDPA +S A
Sbjct: 1 MENDDVDMHAADTSE-ELDDMKKRLKEMEDEAAALREMQAKVEKEMGSAQDPANASASQA 59
Query: 61 NREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEA 109
N+EE+DSRSVFVGN QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFL+ EA
Sbjct: 60 NKEEIDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLEVEA 119
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRP-NPFM-VYQSRGAIIPPFLYSPY 167
VQEAL LNESELHGRQLKVT KRTN+PGMKQ+RPRR NP+M ++ R PPF+YSPY
Sbjct: 120 VQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRTINPYMGGFRGRTPYAPPFIYSPY 179
Query: 168 GYGKIPRFRMPMRYSPYY 185
GYGK+PRFRM MRYSPYY
Sbjct: 180 GYGKVPRFRMAMRYSPYY 197
>gi|358248311|ref|NP_001240115.1| uncharacterized protein LOC100784473 [Glycine max]
gi|255635956|gb|ACU18324.1| unknown [Glycine max]
Length = 197
Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 137/198 (69%), Positives = 154/198 (77%), Gaps = 14/198 (7%)
Query: 1 MEGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA 60
ME DD+DM + + ELDDMK RLKEME+EA ALR+M AKV EM S QDPA +S A
Sbjct: 1 MENDDVDMHAADTNE-ELDDMKKRLKEMEDEAAALREMQAKVEKEMGSVQDPANASASQA 59
Query: 61 NREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEA 109
N+EE+DSRSVFVGN QHFQSCGTVNR+TIRTDKFGQPKGYAYVEFL+ EA
Sbjct: 60 NKEEIDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLEVEA 119
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRP-NPFM-VYQSRGAIIPPFLYSPY 167
VQEAL LNESELHGRQLKVT KRTN+PGMKQ+RPRR NP+M + R PF+YSPY
Sbjct: 120 VQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSTNPYMGGLRGRTPYAAPFIYSPY 179
Query: 168 GYGKIPRFRMPMRYSPYY 185
GYGK+PRFRM MR+SPYY
Sbjct: 180 GYGKVPRFRMAMRHSPYY 197
>gi|224060413|ref|XP_002300187.1| predicted protein [Populus trichocarpa]
gi|222847445|gb|EEE84992.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 135/198 (68%), Positives = 156/198 (78%), Gaps = 14/198 (7%)
Query: 1 MEGDDMDMI--ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSS 58
M+GDD+DM ET ELDDMK RLKEME+EA AL +M AKV EM S QDP+A ++
Sbjct: 1 MDGDDVDMAAAETNESVPELDDMKKRLKEMEDEAAALLEMQAKVEKEMGSVQDPSASAAA 60
Query: 59 LA-NREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQ 106
NREEVDSRSVFVGN QHFQ+CGT+NR+TIR+DK+GQPKGYAYVEFL+
Sbjct: 61 SQANREEVDSRSVFVGNVDYSCTPEEVQQHFQACGTINRITIRSDKYGQPKGYAYVEFLE 120
Query: 107 SEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSP 166
E VQEAL LNESELHGRQLKVTVKRTN+PGMKQ R RRPNP+M + RGA +PP+L+SP
Sbjct: 121 PETVQEALLLNESELHGRQLKVTVKRTNLPGMKQFRARRPNPYMGFPPRGAPMPPYLFSP 180
Query: 167 YGYGKIPRFRMPMRYSPY 184
YGYGK+ R+RMPMRYSPY
Sbjct: 181 YGYGKVLRYRMPMRYSPY 198
>gi|224081120|ref|XP_002306300.1| predicted protein [Populus trichocarpa]
gi|222855749|gb|EEE93296.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 136/203 (66%), Positives = 153/203 (75%), Gaps = 18/203 (8%)
Query: 1 MEGD------DMDMIETENKQV-ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPA 53
+EGD D+DM ++ V ELD+MK RLKEMEEEA ALR+M AKV EM + QDPA
Sbjct: 16 VEGDMDPHNADVDMSAADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPA 75
Query: 54 AGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYV 102
++ ANREE DSRSVFVGN QHFQSCGTVNRVTI TDKFGQPKG+AYV
Sbjct: 76 TAAANQANREEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYV 135
Query: 103 EFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPF 162
EFL+ EAVQEAL LNESELHGRQLKV+ KRTNVPGMKQ+RPRR NP+M Y+ R PP+
Sbjct: 136 EFLEVEAVQEALALNESELHGRQLKVSPKRTNVPGMKQYRPRRINPYMGYRFRRPYAPPY 195
Query: 163 LYSPYGYGKIPRFRMPMRYSPYY 185
YSPYGYGK+PRFR MRY PYY
Sbjct: 196 FYSPYGYGKVPRFRRSMRYMPYY 218
>gi|357476333|ref|XP_003608452.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355509507|gb|AES90649.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 199
Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/199 (68%), Positives = 154/199 (77%), Gaps = 14/199 (7%)
Query: 1 MEGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA 60
ME DD+DMI +N + +LDDMK RLKEME+EA AL++M AKV EM S QDPA +S
Sbjct: 1 MENDDVDMIGADNNEADLDDMKKRLKEMEDEAAALKEMQAKVEKEMGSVQDPANASASQI 60
Query: 61 NREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEA 109
NREEVD+RS+FVGN QHFQSCGTVNRVTIRTDKFGQPKGYAYVEF++ EA
Sbjct: 61 NREEVDARSIFVGNVDYACTPEDVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFVEVEA 120
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRP-NPFMVYQSRG--AIIPPFLYSP 166
VQEAL LNESELHGRQLKVT KRTNVPGMKQ RPRRP NP+M ++ R A + +P
Sbjct: 121 VQEALLLNESELHGRQLKVTAKRTNVPGMKQFRPRRPSNPYMGFRGRTPYAPPFAYAPAP 180
Query: 167 YGYGKIPRFRMPMRYSPYY 185
YGYGKIPRFRM MRYSPYY
Sbjct: 181 YGYGKIPRFRMGMRYSPYY 199
>gi|255581746|ref|XP_002531675.1| poly-A binding protein, putative [Ricinus communis]
gi|223528706|gb|EEF30719.1| poly-A binding protein, putative [Ricinus communis]
Length = 218
Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 128/180 (71%), Positives = 143/180 (79%), Gaps = 11/180 (6%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
ELD+MK RLKEMEEEA ALR+M AKV EM + QDPA+ ++ AN+EE DSRSVFVGN
Sbjct: 39 ELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPASAAANQANKEETDSRSVFVGNVD 98
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQSCGTVNRVTI TDKFGQPKG+AYVEFL+ EA+QEAL LNESELHGRQ
Sbjct: 99 YACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAIQEALLLNESELHGRQ 158
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 185
LKV KRTNVPGMKQ+RPRR NP+M Y+ R +PP+ YSPYGYGK PRFR PMRY PYY
Sbjct: 159 LKVLPKRTNVPGMKQYRPRRFNPYMGYRFRRPYVPPYFYSPYGYGKAPRFRRPMRYMPYY 218
>gi|356512681|ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 215
Score = 259 bits (661), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 133/197 (67%), Positives = 149/197 (75%), Gaps = 12/197 (6%)
Query: 1 MEGD-DMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSL 59
MEGD DM + + ELD+MK RLKEMEEEA ALR+M AKV E+ S QDPA +S
Sbjct: 19 MEGDIDMSAADDDAAVKELDEMKRRLKEMEEEAAALREMQAKVDKEIGSVQDPANSAASQ 78
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSE 108
AN+EE DSRSVFVGN QHFQSCGTVNRVTI TDKFGQPKG+AYVEF+++E
Sbjct: 79 ANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAE 138
Query: 109 AVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYG 168
AVQEAL LNESELHGRQLKV KRTNVPGMKQ+RPRR NP+M Y R PP+ YSPYG
Sbjct: 139 AVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMAYGFRRPYTPPYFYSPYG 198
Query: 169 YGKIPRFRMPMRYSPYY 185
YGK+PRFR P RY PY+
Sbjct: 199 YGKVPRFRRPNRYMPYH 215
>gi|388500100|gb|AFK38116.1| unknown [Medicago truncatula]
Length = 199
Score = 258 bits (659), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 136/199 (68%), Positives = 153/199 (76%), Gaps = 14/199 (7%)
Query: 1 MEGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA 60
ME DD+DMI +N + +LDDMK RLKEME+EA AL++M AKV EM S QDPA +S
Sbjct: 1 MENDDVDMIGADNNEADLDDMKKRLKEMEDEAAALKEMQAKVEKEMGSIQDPANASASQI 60
Query: 61 NREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEA 109
NREEVD+RS+FVGN QHFQSCGTVNRVTIRTDKFGQPKGYAYVEF++ EA
Sbjct: 61 NREEVDARSIFVGNVDYACTPEDVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFVEVEA 120
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRP-NPFMVYQSR--GAIIPPFLYSP 166
QEAL LNESELHGRQLKVT KRTNVPGMKQ RPRRP NP+M ++ R A + +P
Sbjct: 121 AQEALLLNESELHGRQLKVTAKRTNVPGMKQFRPRRPSNPYMGFRGRTPYAPPFAYAPAP 180
Query: 167 YGYGKIPRFRMPMRYSPYY 185
YGYGKIPRFRM MRYSPYY
Sbjct: 181 YGYGKIPRFRMGMRYSPYY 199
>gi|217072312|gb|ACJ84516.1| unknown [Medicago truncatula]
gi|388501418|gb|AFK38775.1| unknown [Medicago truncatula]
Length = 216
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/198 (66%), Positives = 151/198 (76%), Gaps = 13/198 (6%)
Query: 1 MEGD-DMDMIETENKQV-ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSS 58
MEGD DM + E + ELD+M+ RLKEMEEEA ALR+MHAKV E+ S QDPA+ +S
Sbjct: 19 MEGDVDMSAADDEAGGMKELDEMRRRLKEMEEEAAALREMHAKVEKEIGSVQDPASVAAS 78
Query: 59 LANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQS 107
N+EE D+RSVFVGN QHFQSCGTVNRVTI TDKFGQPKG+AYVEF+++
Sbjct: 79 QENKEEADARSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVET 138
Query: 108 EAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPY 167
EAVQEAL L+ESELHGRQLKV KRTNVPGMKQ+RPRR NP+M Y R PP++YSPY
Sbjct: 139 EAVQEALLLSESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMAYGFRRPYAPPYMYSPY 198
Query: 168 GYGKIPRFRMPMRYSPYY 185
GYGK PR+R P RY PYY
Sbjct: 199 GYGKAPRYRRPNRYMPYY 216
>gi|449513137|ref|XP_004164242.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/197 (67%), Positives = 150/197 (76%), Gaps = 15/197 (7%)
Query: 1 MEGDDMDMIETENKQV-ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSL 59
MEGD +DM ++ V ELD+MK RLKEMEEEA ALR+M AKVG EM + QDPA +S
Sbjct: 19 MEGD-VDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVGKEMGAVQDPAGTSASQ 77
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSE 108
A +EE DSRSVFVGN QHFQSCGTVNRVTI TDKFGQPKG+AYVEFL++E
Sbjct: 78 AGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAE 137
Query: 109 AVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYG 168
AVQEAL LNESELHGRQLKV KRTNVPGMKQ+R RR NP++ + R PP+ YSPYG
Sbjct: 138 AVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVGF--RRPYAPPYFYSPYG 195
Query: 169 YGKIPRFRMPMRYSPYY 185
YGK+PRFR MRY PYY
Sbjct: 196 YGKMPRFRRSMRYMPYY 212
>gi|388498836|gb|AFK37484.1| unknown [Lotus japonicus]
Length = 200
Score = 252 bits (644), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 139/200 (69%), Positives = 153/200 (76%), Gaps = 15/200 (7%)
Query: 1 MEGDDMDMI---ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS 57
ME DD+DM+ N + ELDDMK RLKEME+EA ALR+M AKV EM S DPA +
Sbjct: 1 MENDDVDMVGAENNNNNEAELDDMKKRLKEMEDEAAALREMQAKVEKEMGSVPDPANASA 60
Query: 58 SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQ 106
S NREEVDSRSVFVGN QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFL+
Sbjct: 61 SQTNREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLE 120
Query: 107 SEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRG-AIIPPFLYS 165
EAVQEAL LNESELHGRQLKV+ KRTNVPGMKQ RPR PNP+M ++ R PPF ++
Sbjct: 121 VEAVQEALALNESELHGRQLKVSGKRTNVPGMKQFRPRAPNPYMGFRGRALFAPPPFAFA 180
Query: 166 PYGYGKIPRFRMPMRYSPYY 185
PYGYGK+PRFRM MRYSPYY
Sbjct: 181 PYGYGKVPRFRMGMRYSPYY 200
>gi|224093736|ref|XP_002309968.1| predicted protein [Populus trichocarpa]
gi|222852871|gb|EEE90418.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 252 bits (643), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 150/203 (73%), Gaps = 18/203 (8%)
Query: 1 MEGD------DMDMIETENKQV-ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPA 53
+EGD D+DM E+ V ELD+MK RLKEMEEEA ALR+M AKV EM + DPA
Sbjct: 16 VEGDMDPHNADVDMSAAEDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVPDPA 75
Query: 54 AGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYV 102
+ ++ AN+EE DSRSVFVGN QHFQSCGTVNRVTI TDKFGQPKG+AYV
Sbjct: 76 SAAANQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYV 135
Query: 103 EFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPF 162
EF++ EAVQEAL LNESELHGRQLKV+ KRTNVPGMKQ+ PR NP+M + R PP+
Sbjct: 136 EFVEVEAVQEALALNESELHGRQLKVSPKRTNVPGMKQYHPRSFNPYMGNRFRRPYAPPY 195
Query: 163 LYSPYGYGKIPRFRMPMRYSPYY 185
YSPYGYGK+PRFR MRY PYY
Sbjct: 196 FYSPYGYGKVPRFRRSMRYMPYY 218
>gi|449451417|ref|XP_004143458.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449496421|ref|XP_004160130.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 251 bits (642), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 128/198 (64%), Positives = 150/198 (75%), Gaps = 13/198 (6%)
Query: 1 MEGDDMDMIETENKQV-ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSL 59
+E D+DM T++ + ELD+MK RLKEMEEEA ALR+M AKV EM + QDPA S
Sbjct: 15 VEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQ 74
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSE 108
++EE DSRSVFVGN QHFQSCGTVNRVTI TDKFG PKG+AYVEF+++E
Sbjct: 75 ESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAE 134
Query: 109 AVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPY- 167
A+QEAL LNE+ELHGRQLKV KRTNVPGMKQ+ P+R NP+M Y+SR +PP+ YSPY
Sbjct: 135 AIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYG 194
Query: 168 GYGKIPRFRMPMRYSPYY 185
GYGK PRFR PMRY PYY
Sbjct: 195 GYGKTPRFRRPMRYMPYY 212
>gi|449458283|ref|XP_004146877.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 132/197 (67%), Positives = 149/197 (75%), Gaps = 15/197 (7%)
Query: 1 MEGDDMDMIETENKQV-ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSL 59
MEGD +DM ++ V ELD+MK RLKEMEEEA ALR+M AKV EM + QDPA +S
Sbjct: 19 MEGD-VDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQ 77
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSE 108
A +EE DSRSVFVGN QHFQSCGTVNRVTI TDKFGQPKG+AYVEFL++E
Sbjct: 78 AGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAE 137
Query: 109 AVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYG 168
AVQEAL LNESELHGRQLKV KRTNVPGMKQ+R RR NP++ + R PP+ YSPYG
Sbjct: 138 AVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVGF--RRPYAPPYFYSPYG 195
Query: 169 YGKIPRFRMPMRYSPYY 185
YGK+PRFR MRY PYY
Sbjct: 196 YGKMPRFRRSMRYMPYY 212
>gi|356525457|ref|XP_003531341.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 220
Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/180 (70%), Positives = 140/180 (77%), Gaps = 12/180 (6%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
ELD+MK RLKEMEEEA ALR+M AKV E+ S QDPA +S AN+EE D+RSVFVGN
Sbjct: 42 ELDEMKRRLKEMEEEAAALREMQAKVEKEIGSVQDPANAAASQANKEEADARSVFVGNVD 101
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQSCGTVNRVTI TDKFGQPKG+AYVEF+++EAVQEAL LNESELHGRQ
Sbjct: 102 YACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQ 161
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 185
LKV KRTNVPGMKQ+RPR NP+M Y R P+LYSPYGYGK+PRFR P RY PYY
Sbjct: 162 LKVLPKRTNVPGMKQYRPRCFNPYMAYGFRRPYT-PYLYSPYGYGKVPRFRRPNRYMPYY 220
>gi|255637596|gb|ACU19123.1| unknown [Glycine max]
Length = 205
Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/187 (67%), Positives = 142/187 (75%), Gaps = 12/187 (6%)
Query: 1 MEGD-DMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSL 59
MEGD DM + + ELD+MK RLKEMEEEA ALR+M AKV E+ S QDPA +S
Sbjct: 19 MEGDIDMSAADDDAAVKELDEMKRRLKEMEEEAAALREMQAKVDKEIGSVQDPANSAASQ 78
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSE 108
AN+EE DSRSVFVGN QHFQSCGTVNRVTI TDKFGQPKG+AYVEF+++E
Sbjct: 79 ANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAE 138
Query: 109 AVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYG 168
AVQEAL LNESELHGRQLKV KRTNVPGMKQ+RPRR NP+M Y R PP+ YSPYG
Sbjct: 139 AVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMAYGFRRPYTPPYFYSPYG 198
Query: 169 YGKIPRF 175
YGK+PRF
Sbjct: 199 YGKVPRF 205
>gi|297797553|ref|XP_002866661.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312496|gb|EFH42920.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 220
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 141/179 (78%), Gaps = 12/179 (6%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
ELD+MK RLKEME+EA ALR+M AKV EM + QDPA+ ++ A +EEVD+RSVFVGN
Sbjct: 42 ELDEMKKRLKEMEDEAAALREMQAKVEKEMGA-QDPASIAANQAGKEEVDARSVFVGNVD 100
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQ+CGTV+RVTI TDKFGQPKG+AYVEF++ EAVQEAL LNESELHGRQ
Sbjct: 101 YACTPEEVQQHFQTCGTVHRVTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQ 160
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 184
LKV KRTNVPG+KQ R RR NP+M Y+ R +PP++YSPYGYGK PRFR PMRY PY
Sbjct: 161 LKVLQKRTNVPGLKQFRGRRFNPYMGYRFRRPFMPPYMYSPYGYGKAPRFRRPMRYMPY 219
>gi|119720774|gb|ABL97957.1| poly(A)-binding protein II-like [Brassica rapa]
Length = 220
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 140/179 (78%), Gaps = 12/179 (6%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
ELD+MK RLKEME+EA ALR+M AKV EM + QDPA ++ A +EEVD+RSVFVGN
Sbjct: 42 ELDEMKKRLKEMEDEAAALREMQAKVEKEMGA-QDPATLAANQAGKEEVDARSVFVGNVD 100
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQSCGTV+RVTI TDKFGQPKG+AYVEF++ EA+QEAL LNESELHGRQ
Sbjct: 101 YACTPEEVQQHFQSCGTVHRVTILTDKFGQPKGFAYVEFVEVEAIQEALQLNESELHGRQ 160
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 184
LKV KRTNVPG+KQHR RR NP+M Y+ R + P++YSPYGYGK PRFR PMRY PY
Sbjct: 161 LKVLPKRTNVPGLKQHRGRRFNPYMGYRFRRPFMSPYMYSPYGYGKAPRFRRPMRYMPY 219
>gi|15238140|ref|NP_196597.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|7671468|emb|CAB89408.1| RNA binding protein-like [Arabidopsis thaliana]
gi|28393013|gb|AAO41941.1| putative polyadenylate-binding protein II (PAB2) [Arabidopsis
thaliana]
gi|28827384|gb|AAO50536.1| putative polyadenylate-binding protein II (PAB2) [Arabidopsis
thaliana]
gi|332004146|gb|AED91529.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 217
Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 122/192 (63%), Positives = 142/192 (73%), Gaps = 12/192 (6%)
Query: 5 DMDMIETENKQV-ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE 63
D+DM + V EL +MK RLKEMEEEA ALR+M AKV EM + QDPA+ ++ +E
Sbjct: 25 DIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQAKVEKEMGATQDPASMAANQEGKE 84
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQE 112
EVD+RSV+VGN HFQ+CGTVNRVTI DKFGQPKG+AYVEF++ EAVQE
Sbjct: 85 EVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTILMDKFGQPKGFAYVEFVEVEAVQE 144
Query: 113 ALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKI 172
AL LNESELHGRQLKV+ KRTNVPGMKQ+ P R NP M Y+ R +PP+ YSPYGYGK
Sbjct: 145 ALQLNESELHGRQLKVSPKRTNVPGMKQYHPGRFNPSMGYRFRRPFVPPYFYSPYGYGKA 204
Query: 173 PRFRMPMRYSPY 184
PRFR PMRY PY
Sbjct: 205 PRFRRPMRYMPY 216
>gi|15238390|ref|NP_201329.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|14423494|gb|AAK62429.1|AF386984_1 poly(A)-binding protein II-like [Arabidopsis thaliana]
gi|10178188|dbj|BAB11662.1| poly(A)-binding protein II-like [Arabidopsis thaliana]
gi|23197620|gb|AAN15337.1| poly(A)-binding protein II-like [Arabidopsis thaliana]
gi|332010647|gb|AED98030.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 220
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 140/179 (78%), Gaps = 12/179 (6%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
ELD+MK RLKEME+EA ALR+M AKV EM + QDPA+ ++ A +EEVD+RSVFVGN
Sbjct: 42 ELDEMKKRLKEMEDEAAALREMQAKVEKEMGA-QDPASIAANQAGKEEVDARSVFVGNVD 100
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQ+CGTV+RVTI TDKFGQPKG+AYVEF++ EAVQEAL LNESELHGRQ
Sbjct: 101 YACTPEEVQQHFQTCGTVHRVTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQ 160
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 184
LKV KRTNVPG+KQ R RR NP+M Y+ R + P++YSPYGYGK PRFR PMRY PY
Sbjct: 161 LKVLQKRTNVPGLKQFRGRRFNPYMGYRFRRPFMSPYMYSPYGYGKAPRFRRPMRYMPY 219
>gi|302803015|ref|XP_002983261.1| hypothetical protein SELMODRAFT_117870 [Selaginella moellendorffii]
gi|300148946|gb|EFJ15603.1| hypothetical protein SELMODRAFT_117870 [Selaginella moellendorffii]
Length = 219
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/180 (65%), Positives = 136/180 (75%), Gaps = 13/180 (7%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
EL+DMK RLKEME+EA ALR M AKV EM + QD A +S A +EE D+RSV+VGN
Sbjct: 42 ELEDMKKRLKEMEDEAAALRDMQAKVEKEMGASQD--ANAASQAGKEEADARSVYVGNVD 99
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQSCGTVNRVTI TDKFGQPKGYAYVEFL+ EAVQ A+ LNESELHGR
Sbjct: 100 YSCTPEEVQQHFQSCGTVNRVTILTDKFGQPKGYAYVEFLEGEAVQNAILLNESELHGRP 159
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 185
LKV+ KRTNVPGMKQ+R RR +P Y +R A +PP+ Y+PYG+GKIPRFR MRY PY+
Sbjct: 160 LKVSAKRTNVPGMKQYRGRRFDPSYAYMTRRAYMPPYAYAPYGFGKIPRFRRAMRYRPYF 219
>gi|346464877|gb|AEO32283.1| hypothetical protein [Amblyomma maculatum]
Length = 207
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 122/186 (65%), Positives = 143/186 (76%), Gaps = 16/186 (8%)
Query: 5 DMDMIETENKQV---ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLAN 61
D+DMI T++ V ELD+MK RLKEMEEEA ALR+M AKV EM + QDPA+ ++ +
Sbjct: 23 DVDMIRTDDDAVKLQELDEMKKRLKEMEEEAAALREMQAKVEKEMGAGQDPASAAANQES 82
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAV 110
++EVDSRSVFVGN QHFQSCGTVNRVTI TDKFGQPKGYAYVEFL+ EAV
Sbjct: 83 KQEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTILTDKFGQPKGYAYVEFLEVEAV 142
Query: 111 QEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYG 170
QEAL LNESELHGRQLKV+ KRTNVPGMKQ+R RR NP++ + R +P YSP+GYG
Sbjct: 143 QEALQLNESELHGRQLKVSAKRTNVPGMKQYRMRRFNPYIGTRYRRPYMP--YYSPFGYG 200
Query: 171 KIPRFR 176
K+PRFR
Sbjct: 201 KVPRFR 206
>gi|302755738|ref|XP_002961293.1| hypothetical protein SELMODRAFT_74095 [Selaginella moellendorffii]
gi|300172232|gb|EFJ38832.1| hypothetical protein SELMODRAFT_74095 [Selaginella moellendorffii]
Length = 221
Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 118/180 (65%), Positives = 136/180 (75%), Gaps = 13/180 (7%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
EL+DMK RLKEME+EA ALR M AKV EM + QD A +S A +EE D+RSV+VGN
Sbjct: 44 ELEDMKKRLKEMEDEAAALRDMQAKVEKEMGAGQD--ANAASQAGKEEADARSVYVGNVD 101
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQSCGTVNRVTI TDKFGQPKGYAYVEFL+ EAVQ A+ LNESELHGR
Sbjct: 102 YSCTPEEVQQHFQSCGTVNRVTILTDKFGQPKGYAYVEFLEGEAVQNAILLNESELHGRP 161
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 185
LKV+ KRTNVPGMKQ+R RR +P Y +R A +PP+ Y+PYG+GKIPRFR MRY PY+
Sbjct: 162 LKVSAKRTNVPGMKQYRGRRFDPSYAYMTRRAYMPPYAYAPYGFGKIPRFRRAMRYRPYF 221
>gi|225454892|ref|XP_002279148.1| PREDICTED: polyadenylate-binding protein 2-like [Vitis vinifera]
Length = 226
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/199 (57%), Positives = 145/199 (72%), Gaps = 16/199 (8%)
Query: 2 EGDDMDMI-----ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGG 56
+ +D+DM+ +++ ++DM+ RLKE+EEEA ALR+M AKV EM + QD ++
Sbjct: 28 DAEDVDMVSRPEDDSDPNSKNIEDMRKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSAS 87
Query: 57 SSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFL 105
++ A +EEVDSRS++VGN QHFQSCGTVNRVTI TDKFGQPKG+AYVEF+
Sbjct: 88 ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFV 147
Query: 106 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYS 165
+ +AVQ AL LNESELHGRQLKV+ KRTN+PGMKQ+R RRPNPF R + P Y
Sbjct: 148 EIDAVQNALLLNESELHGRQLKVSAKRTNIPGMKQYRGRRPNPFGFRGRRPFMPGPSFYP 207
Query: 166 PYGYGKIPRFRMPMRYSPY 184
PYGYG++PRFR PMRY PY
Sbjct: 208 PYGYGRVPRFRRPMRYRPY 226
>gi|449458309|ref|XP_004146890.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
2-like [Cucumis sativus]
Length = 237
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 136/179 (75%), Gaps = 12/179 (6%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
+L+DMK RLKE+EEEA ALR+M AKV EM + QD ++ ++ A +EEVDSRSV+VGN
Sbjct: 60 DLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSVYVGNVD 119
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQSCGTVNRVTI TDKFG PKG+AYVEF++ +AVQ AL LNESELHGRQ
Sbjct: 120 YACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQ 179
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 184
LKV+ KRTNVPGMKQ+R RRPNPF ++ R IP Y YGYG++PRFR PMRY PY
Sbjct: 180 LKVSAKRTNVPGMKQYRGRRPNPFG-FRGRRPFIPTAPYPSYGYGRVPRFRRPMRYRPY 237
>gi|449519186|ref|XP_004166616.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 229
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 136/179 (75%), Gaps = 12/179 (6%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
+L+DMK RLKE+EEEA ALR+M AKV EM + QD ++ ++ A +EEVDSRSV+VGN
Sbjct: 52 DLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSVYVGNVD 111
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQSCGTVNRVTI TDKFG PKG+AYVEF++ +AVQ AL LNESELHGRQ
Sbjct: 112 YACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQ 171
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 184
LKV+ KRTNVPGMKQ+R RRPNPF ++ R IP Y YGYG++PRFR PMRY PY
Sbjct: 172 LKVSAKRTNVPGMKQYRGRRPNPFG-FRGRRPFIPTAPYPSYGYGRVPRFRRPMRYRPY 229
>gi|345121426|gb|AEN74948.1| poly(A)-binding protein 1 [Citrus sinensis]
Length = 234
Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 136/179 (75%), Gaps = 12/179 (6%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
+L+DMK RLKE+EEEA ALR+M AKV EM + QD ++ ++ A +EEVDSRS++VGN
Sbjct: 57 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 116
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ +AVQ AL LNE+ELHGRQ
Sbjct: 117 YACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQ 176
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 184
LKV+ KRTN+PGMKQ R RRPN F ++ R IP + PYGYG+IPRFR PMRY PY
Sbjct: 177 LKVSAKRTNIPGMKQFRGRRPNTFG-FRGRRPFIPGVPFVPYGYGRIPRFRRPMRYRPY 234
>gi|147827572|emb|CAN77560.1| hypothetical protein VITISV_031100 [Vitis vinifera]
Length = 175
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 111/175 (63%), Positives = 132/175 (75%), Gaps = 11/175 (6%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN------ 74
M+ RLKE+EEEA ALR+M AKV EM + QD ++ ++ A +EEVDSRS++VGN
Sbjct: 1 MRKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSASATQAEKEEVDSRSIYVGNVDYACT 60
Query: 75 -----QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 129
QHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ +AVQ AL LNESELHGRQLKV+
Sbjct: 61 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNESELHGRQLKVS 120
Query: 130 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 184
KRTN+PGMKQ+R RRPNPF R + P Y PYGYG++PRFR PMRY PY
Sbjct: 121 AKRTNIPGMKQYRGRRPNPFGFRGRRPFMPGPSFYPPYGYGRVPRFRRPMRYRPY 175
>gi|115448789|ref|NP_001048174.1| Os02g0757900 [Oryza sativa Japonica Group]
gi|46805689|dbj|BAD17090.1| putative poly(A) binding protein [Oryza sativa Japonica Group]
gi|113537705|dbj|BAF10088.1| Os02g0757900 [Oryza sativa Japonica Group]
gi|215692407|dbj|BAG87827.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623708|gb|EEE57840.1| hypothetical protein OsJ_08453 [Oryza sativa Japonica Group]
Length = 212
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/199 (61%), Positives = 140/199 (70%), Gaps = 19/199 (9%)
Query: 1 MEGDDMDMI---ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS 57
M+G D+DM + K ELD MK RLKEMEEEA ALR M AKV EM DP+A S
Sbjct: 19 MDGADVDMASGGDDAAKLQELDQMKRRLKEMEEEAAALRDMQAKVAKEMQGG-DPSA--S 75
Query: 58 SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQ 106
+ +E+VD+RSV+VGN QHFQ+CGTVNRVTI TDKFGQPKG+AYVEFL+
Sbjct: 76 TAEAKEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLE 135
Query: 107 SEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSP 166
EAVQEAL+LNESELHGRQ+KV KRTNVPGMKQ PR NP+ Y R P F P
Sbjct: 136 QEAVQEALNLNESELHGRQIKVAPKRTNVPGMKQRPPRGYNPYHGYPYRSYGAPYF--PP 193
Query: 167 YGYGKIPRFRMPMRYSPYY 185
YGYG++PRFR PMRY PY+
Sbjct: 194 YGYGRVPRFRRPMRYRPYF 212
>gi|224134274|ref|XP_002321779.1| predicted protein [Populus trichocarpa]
gi|222868775|gb|EEF05906.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 137/179 (76%), Gaps = 15/179 (8%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
+L+DMK RLKE+EEEA ALR+M AKV EM + Q +A + A +EEVDSRS++VGN
Sbjct: 49 DLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQGASA---TQAEKEEVDSRSIYVGNVD 105
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ +AVQ A+ LNESELHGRQ
Sbjct: 106 YSCTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFIEVDAVQNAVLLNESELHGRQ 165
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 184
LKV+ KRTNVPGMKQ+R RRP+P+ ++S+ A +P Y YGYG++PRFR PMRY PY
Sbjct: 166 LKVSAKRTNVPGMKQYRGRRPSPYG-FRSQRAFMPAPFYPAYGYGRVPRFRRPMRYRPY 223
>gi|212722530|ref|NP_001132591.1| uncharacterized protein LOC100194063 [Zea mays]
gi|194694844|gb|ACF81506.1| unknown [Zea mays]
gi|195635091|gb|ACG37014.1| polyadenylate-binding protein 2 [Zea mays]
gi|413938966|gb|AFW73517.1| polyadenylate-binding protein 2 [Zea mays]
Length = 212
Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 121/199 (60%), Positives = 140/199 (70%), Gaps = 19/199 (9%)
Query: 1 MEGDDMDMIETEN---KQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS 57
M+G D+DM + + K ELD+MK RLKEMEEEA ALR M AKV EM DP+A S
Sbjct: 19 MDGADVDMAASGDDAAKLQELDEMKRRLKEMEEEAAALRDMQAKVAKEMQGG-DPSA--S 75
Query: 58 SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQ 106
+ +E+VD+RSV+VGN QHFQ+CGTVNRVTI TDKFGQPKG+AYVEFL+
Sbjct: 76 TAEAKEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLE 135
Query: 107 SEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSP 166
E VQEAL+LNESELHGRQ+KV KRTNVPGMKQ PR NP+ Y R P F P
Sbjct: 136 QEGVQEALNLNESELHGRQIKVAPKRTNVPGMKQRPPRGYNPYHGYPYRSYGAPYF--PP 193
Query: 167 YGYGKIPRFRMPMRYSPYY 185
YGYG+ PRFR PMRY PY+
Sbjct: 194 YGYGRAPRFRRPMRYRPYF 212
>gi|46805690|dbj|BAD17091.1| putative poly(A) binding protein [Oryza sativa Japonica Group]
gi|125541200|gb|EAY87595.1| hypothetical protein OsI_09006 [Oryza sativa Indica Group]
gi|215678683|dbj|BAG92338.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/202 (60%), Positives = 140/202 (69%), Gaps = 21/202 (10%)
Query: 1 MEGDDMDMI---ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQ---DPAA 54
M+G D+DM + K ELD MK RLKEMEEEA ALR M AKV EM DP+A
Sbjct: 19 MDGADVDMASGGDDAAKLQELDQMKRRLKEMEEEAAALRDMQAKVAKEMQGGPPGGDPSA 78
Query: 55 GGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVE 103
S+ +E+VD+RSV+VGN QHFQ+CGTVNRVTI TDKFGQPKG+AYVE
Sbjct: 79 --STAEAKEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVE 136
Query: 104 FLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFL 163
FL+ EAVQEAL+LNESELHGRQ+KV KRTNVPGMKQ PR NP+ Y R P F
Sbjct: 137 FLEQEAVQEALNLNESELHGRQIKVAPKRTNVPGMKQRPPRGYNPYHGYPYRSYGAPYF- 195
Query: 164 YSPYGYGKIPRFRMPMRYSPYY 185
PYGYG++PRFR PMRY PY+
Sbjct: 196 -PPYGYGRVPRFRRPMRYRPYF 216
>gi|357138032|ref|XP_003570602.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 210
Score = 218 bits (556), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 121/199 (60%), Positives = 141/199 (70%), Gaps = 21/199 (10%)
Query: 1 MEGDDMDMIET-ENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSL 59
MEG D+DM ++ ELD+MK RLKEMEEEA ALR M AKV EM Q A S+
Sbjct: 19 MEGGDVDMTTGGDDAAKELDEMKRRLKEMEEEAAALRDMQAKVAKEM---QGGDANASTA 75
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSE 108
+E+VD+RSV+VGN QHFQ+CGTVNRVTI TDKFGQPKG+AYVEFL+ E
Sbjct: 76 EAKEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQE 135
Query: 109 AVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPF--MVYQSRGAIIPPFLYSP 166
AVQEAL+LNESELHGRQ+KV+ KRTNVPGMKQ PR NP+ Y+S GA P P
Sbjct: 136 AVQEALNLNESELHGRQIKVSPKRTNVPGMKQRPPRGFNPYHGYPYRSYGAQYFP----P 191
Query: 167 YGYGKIPRFRMPMRYSPYY 185
YGYG++PRFR P RY PY+
Sbjct: 192 YGYGRVPRFRRPTRYRPYF 210
>gi|168065663|ref|XP_001784768.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663676|gb|EDQ50428.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 219
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/196 (61%), Positives = 135/196 (68%), Gaps = 20/196 (10%)
Query: 1 MEGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA 60
++GDD E +K EL++MK RLKEMEEEA ALR M AKV EM++ QD S A
Sbjct: 33 LKGDDTATDEAASK--ELEEMKKRLKEMEEEAAALRDMQAKVEKEMSAVQDSVGKDGSPA 90
Query: 61 NREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEA 109
NREE D+RSVFVGN QHFQSCGTVNRVTI TDKFGQPKG+AYVEFL+ EA
Sbjct: 91 NREEADARSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEA 150
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGY 169
VQ A+ LNESELH RQLKVT KRTNVPGMK +R R PF Y+ R PP Y
Sbjct: 151 VQNAILLNESELHNRQLKVTAKRTNVPGMKAYRGRPYAPFYGYRPRRP-YPPL------Y 203
Query: 170 GKIPRFRMPMRYSPYY 185
GK+PRFR PMRY PYY
Sbjct: 204 GKMPRFRRPMRYRPYY 219
>gi|357138034|ref|XP_003570603.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 216
Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 121/205 (59%), Positives = 140/205 (68%), Gaps = 27/205 (13%)
Query: 1 MEGDDMDMIETENKQV-------ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPA 53
MEG D+DM + ELD+MK RLKEMEEEA ALR M AKV EM Q
Sbjct: 19 MEGGDVDMTTGGDDAAKSFSLMQELDEMKRRLKEMEEEAAALRDMQAKVAKEM---QGGD 75
Query: 54 AGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYV 102
A S+ +E+VD+RSV+VGN QHFQ+CGTVNRVTI TDKFGQPKG+AYV
Sbjct: 76 ANASTAEAKEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYV 135
Query: 103 EFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPF--MVYQSRGAIIP 160
EFL+ EAVQEAL+LNESELHGRQ+KV+ KRTNVPGMKQ PR NP+ Y+S GA
Sbjct: 136 EFLEQEAVQEALNLNESELHGRQIKVSPKRTNVPGMKQRPPRGFNPYHGYPYRSYGAQYF 195
Query: 161 PFLYSPYGYGKIPRFRMPMRYSPYY 185
P PYGYG++PRFR P RY PY+
Sbjct: 196 P----PYGYGRVPRFRRPTRYRPYF 216
>gi|343172515|gb|AEL98961.1| polyadenylate-binding protein, partial [Silene latifolia]
Length = 213
Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 118/201 (58%), Positives = 144/201 (71%), Gaps = 19/201 (9%)
Query: 1 MEGD---DMDMIETENKQV--ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAG 55
+EGD D+DM ++ ELD+MK RLKEMEEEA ALR+M AKV EM + QDPA+
Sbjct: 15 VEGDLDADVDMSAADDDPAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPASA 74
Query: 56 GSSLANREEVDSRSVFVG-----------NQHFQSCGTVNRVTIRTDKFGQPKGYAYVEF 104
+ LAN+EEVD+RS + + FQSCG VNRVTI TDKFGQPKG+AYVEF
Sbjct: 75 -ADLANKEEVDARSFLLAMLIMLAPRKKSSNIFQSCGIVNRVTILTDKFGQPKGFAYVEF 133
Query: 105 LQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRP-NPFMVYQSRGAIIPPFL 163
++ EAVQ+AL LNESELHGRQLKV+ KRTNVPG+KQ R RR NP+M ++ R P+
Sbjct: 134 VEQEAVQQALLLNESELHGRQLKVSPKRTNVPGLKQFRGRRGFNPYMPFRPRRPFPSPY- 192
Query: 164 YSPYGYGKIPRFRMPMRYSPY 184
++PYGYGK+PRFR P RY PY
Sbjct: 193 FNPYGYGKVPRFRRPNRYMPY 213
>gi|30683122|ref|NP_850803.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332004145|gb|AED91528.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 202
Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 111/178 (62%), Positives = 131/178 (73%), Gaps = 12/178 (6%)
Query: 5 DMDMIETENKQV-ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE 63
D+DM + V EL +MK RLKEMEEEA ALR+M AKV EM + QDPA+ ++ +E
Sbjct: 25 DIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQAKVEKEMGATQDPASMAANQEGKE 84
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQE 112
EVD+RSV+VGN HFQ+CGTVNRVTI DKFGQPKG+AYVEF++ EAVQE
Sbjct: 85 EVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTILMDKFGQPKGFAYVEFVEVEAVQE 144
Query: 113 ALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYG 170
AL LNESELHGRQLKV+ KRTNVPGMKQ+ P R NP M Y+ R +PP+ YSPYGYG
Sbjct: 145 ALQLNESELHGRQLKVSPKRTNVPGMKQYHPGRFNPSMGYRFRRPFVPPYFYSPYGYG 202
>gi|297811137|ref|XP_002873452.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319289|gb|EFH49711.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 202
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/178 (61%), Positives = 131/178 (73%), Gaps = 12/178 (6%)
Query: 5 DMDMIETENKQV-ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE 63
D+DM ++ V EL +MK RLKEMEEEA ALR+M AKV EM + QDPA ++ +E
Sbjct: 25 DIDMSAGDDDAVTELAEMKKRLKEMEEEAAALREMQAKVEKEMGATQDPATMAANQEGKE 84
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQE 112
EVD+RSV+VGN HFQ+CGTVNRVTI DKFGQPKG+AYVEF++ EAVQE
Sbjct: 85 EVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTILMDKFGQPKGFAYVEFVEVEAVQE 144
Query: 113 ALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYG 170
AL LNESELHGRQLKV+ KRTNVPGMKQ+ P R NP + Y+ R +PP+ YSPYGYG
Sbjct: 145 ALQLNESELHGRQLKVSPKRTNVPGMKQYHPGRFNPSIGYRFRRPFVPPYFYSPYGYG 202
>gi|168066118|ref|XP_001784990.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663448|gb|EDQ50211.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 216
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/196 (60%), Positives = 133/196 (67%), Gaps = 23/196 (11%)
Query: 1 MEGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA 60
++GDD E +K EL++MK RLKEMEEEA ALR M AKV EM + QD S
Sbjct: 33 LKGDDTTTDEAASK--ELEEMKKRLKEMEEEAAALRDMQAKVEKEMGAVQDSVGKDGSAT 90
Query: 61 NREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEA 109
NREE D+RSVFVGN QHFQSCGTVNRVTI TDKFGQPKG+AYVEFL+ EA
Sbjct: 91 NREEADARSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEA 150
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGY 169
VQ A+ L+ESELH R LKVT KRTNVPGMK +R R P+ Y+SR PP Y
Sbjct: 151 VQNAILLSESELHNRPLKVTAKRTNVPGMKAYRGR---PYYGYRSRRPYPPP-------Y 200
Query: 170 GKIPRFRMPMRYSPYY 185
GK+PRFR PMRY PYY
Sbjct: 201 GKVPRFRRPMRYRPYY 216
>gi|351723063|ref|NP_001235474.1| uncharacterized protein LOC100527139 [Glycine max]
gi|255631638|gb|ACU16186.1| unknown [Glycine max]
Length = 214
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 131/179 (73%), Gaps = 14/179 (7%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
EL+DMK RLKE+EEEA+ALR+M AKV EM + QD + ++ A +EEVD+R ++VGN
Sbjct: 39 ELEDMKKRLKEIEEEASALREMQAKVEKEMGAVQDSSGTSATQAEKEEVDARPIYVGNVD 98
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQSCGTVNRVTI TDKFGQPKG+AYVEF + +AVQ AL LNESELHGRQ
Sbjct: 99 YACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFAEIDAVQNALLLNESELHGRQ 158
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 184
LKV+ KRTNVPGMKQ+ RRP F +SR + + PYGYG++PR+R P RY PY
Sbjct: 159 LKVSAKRTNVPGMKQYFGRRPAGF---RSRRPFMSAPFFPPYGYGRVPRYRRPTRYGPY 214
>gi|326505260|dbj|BAK03017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/180 (62%), Positives = 130/180 (72%), Gaps = 16/180 (8%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
ELD+MK RLKEMEEEA ALR M AKV EM Q A S+ +E+VD+RSV+VGN
Sbjct: 36 ELDEMKRRLKEMEEEAAALRDMQAKVAKEM---QGGDANASTAEAKEQVDARSVYVGNVD 92
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQ+CGTVNRVTI TDKFGQPKG+AYVEFL+ EAVQEAL+LNESELHGRQ
Sbjct: 93 YACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESELHGRQ 152
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 185
+KV+ KRTNVPGMKQ PR +P+ Y R P F PYGYG++PRFR P RY PY+
Sbjct: 153 IKVSPKRTNVPGMKQRPPRGFSPYHAYPYRSYGAPYF--PPYGYGRVPRFRRPTRYRPYF 210
>gi|387169522|gb|AFJ66183.1| hypothetical protein 11M19.19 [Arabidopsis halleri]
Length = 228
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 112/187 (59%), Positives = 135/187 (72%), Gaps = 16/187 (8%)
Query: 9 IETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSR 68
+E + +L+DMK R+KE+EEEA ALR+M AK +M + QDP+ GG S A +EEVDSR
Sbjct: 47 LEPGSSSKDLEDMKKRIKEIEEEAGALREMQAKAEKDMGAGQDPS-GGVSAAEKEEVDSR 105
Query: 69 SVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLN 117
S++VGN QHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ EAVQ +L LN
Sbjct: 106 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILN 165
Query: 118 ESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRM 177
ESELHGRQ+KV+ KRTNVPGM+Q R RRP M RG + Y PY YG++PRFR
Sbjct: 166 ESELHGRQIKVSAKRTNVPGMRQFRGRRPFRPM----RGFMPGVPFYPPYAYGRVPRFRR 221
Query: 178 PMRYSPY 184
PMRY PY
Sbjct: 222 PMRYRPY 228
>gi|297792425|ref|XP_002864097.1| hypothetical protein ARALYDRAFT_918145 [Arabidopsis lyrata subsp.
lyrata]
gi|297309932|gb|EFH40356.1| hypothetical protein ARALYDRAFT_918145 [Arabidopsis lyrata subsp.
lyrata]
Length = 228
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 112/187 (59%), Positives = 135/187 (72%), Gaps = 16/187 (8%)
Query: 9 IETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSR 68
+E + +L+DMK R+KE+EEEA ALR+M AK +M + QDP+ GG S A +EEVDSR
Sbjct: 47 LEPGSSSKDLEDMKKRIKEIEEEAGALREMQAKAEKDMGAGQDPS-GGVSAAEKEEVDSR 105
Query: 69 SVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLN 117
S++VGN QHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ EAVQ +L LN
Sbjct: 106 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILN 165
Query: 118 ESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRM 177
ESELHGRQ+KV+ KRTNVPGM+Q R RRP M RG + Y PY YG++PRFR
Sbjct: 166 ESELHGRQIKVSAKRTNVPGMRQFRGRRPFRPM----RGFMPGVPFYPPYAYGRVPRFRR 221
Query: 178 PMRYSPY 184
PMRY PY
Sbjct: 222 PMRYRPY 228
>gi|255539953|ref|XP_002511041.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550156|gb|EEF51643.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 231
Score = 212 bits (539), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 105/167 (62%), Positives = 128/167 (76%), Gaps = 11/167 (6%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
+L+DMK RLKE+EEEA ALR+M AKV EM + QD ++G ++ A +EEVDSRSV+VGN
Sbjct: 54 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSGSATQAEKEEVDSRSVYVGNVD 113
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ +AVQ AL LNESELHGRQ
Sbjct: 114 YACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVDAVQNALLLNESELHGRQ 173
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKI 172
LKV+ KRTN+PGMKQ+R RRPNP+ ++SR +P PYGYG +
Sbjct: 174 LKVSAKRTNIPGMKQYRGRRPNPYSGFRSRRPFMPAPFSPPYGYGLL 220
>gi|226529568|ref|NP_001148500.1| polyadenylate-binding protein 2 [Zea mays]
gi|195619834|gb|ACG31747.1| polyadenylate-binding protein 2 [Zea mays]
gi|413924473|gb|AFW64405.1| polyadenylate-binding protein 2 [Zea mays]
Length = 212
Score = 211 bits (538), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 114/180 (63%), Positives = 130/180 (72%), Gaps = 16/180 (8%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
ELD+MK +LKEMEEEA ALR M AKV EM DP+ S+ +E+VD+RSV+VGN
Sbjct: 38 ELDEMKRKLKEMEEEAAALRDMQAKVAKEMQGG-DPSI--STAEAKEQVDARSVYVGNVD 94
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQ+CGTVNRVTI TDKFGQPKG+AYVEFL+ EAVQEAL+LNESELHGRQ
Sbjct: 95 YACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESELHGRQ 154
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 185
+KV KRTNVPGMKQ PR NP+ Y R P F PYGYG+ PRFR PMRY PY+
Sbjct: 155 IKVAPKRTNVPGMKQRPPRGYNPYHGYPYRSYGAPYF--PPYGYGRAPRFRRPMRYRPYF 212
>gi|255647938|gb|ACU24426.1| unknown [Glycine max]
Length = 218
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/170 (65%), Positives = 125/170 (73%), Gaps = 17/170 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
ELD+MK RLKEMEEEA ALR+M AKV E+ S QDPA +S AN+EE D+RSVFVGN
Sbjct: 42 ELDEMKRRLKEMEEEAAALREMQAKVEKEIGSVQDPANAAASQANKEEADARSVFVGNVD 101
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQSCGTVNRVTI TDKFGQPKG+AYVEF+++EAVQEAL LNESELHGRQ
Sbjct: 102 YACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQ 161
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRF 175
LKV KRTNVPGMKQ+RP NP+M Y R Y+PY Y + RF
Sbjct: 162 LKVLPKRTNVPGMKQYRPSCFNPYMAYGFRRP------YTPYLYSLMGRF 205
>gi|388515309|gb|AFK45716.1| unknown [Lotus japonicus]
Length = 218
Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 111/181 (61%), Positives = 134/181 (74%), Gaps = 18/181 (9%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
+L+DMK RLKE+EEEA+ALR+M AKV +M + QD A ++ A +EEVD RS++VGN
Sbjct: 43 DLEDMKKRLKEIEEEASALREMQAKVEKDMGAVQD-AGSSATQAEKEEVDGRSIYVGNVD 101
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQSCGTVNRVTI TDKFGQPKG+AYVEF+++EAVQ A+ LNESELHGRQ
Sbjct: 102 YACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQNAVMLNESELHGRQ 161
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIP--PFLYSPYGYGKIPRFRMPMRYSP 183
LKV+ KRTNVPGMKQ+ RRP F +SR +P PF Y PY YG+ PR+ PMRY P
Sbjct: 162 LKVSAKRTNVPGMKQYFGRRPAGF---RSRRPFMPYAPF-YPPYAYGRFPRYGRPMRYRP 217
Query: 184 Y 184
Y
Sbjct: 218 Y 218
>gi|18423239|ref|NP_568751.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
gi|15809838|gb|AAL06847.1| AT5g51120/MWD22_6 [Arabidopsis thaliana]
gi|15982733|gb|AAL09819.1| unknown protein [Arabidopsis thaliana]
gi|19310785|gb|AAL85123.1| unknown protein [Arabidopsis thaliana]
gi|21358850|gb|AAM47151.1| unknown protein [Arabidopsis thaliana]
gi|332008655|gb|AED96038.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
Length = 227
Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 134/187 (71%), Gaps = 15/187 (8%)
Query: 9 IETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSR 68
+E + +L+DMK R+KE+EEEA ALR+M AK +M + QDP+ GG S A +EEVDSR
Sbjct: 45 LEPGSSSRDLEDMKKRIKEIEEEAGALREMQAKAEKDMGASQDPS-GGVSAAEKEEVDSR 103
Query: 69 SVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLN 117
S++VGN QHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ EAVQ +L LN
Sbjct: 104 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILN 163
Query: 118 ESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRM 177
ESELHGRQ+KV+ KRTNVPGM+Q R R PF + +P Y PY YG++PRFR
Sbjct: 164 ESELHGRQIKVSAKRTNVPGMRQFR-GRGRPFRPMRGFMPGVP--FYPPYAYGRVPRFRR 220
Query: 178 PMRYSPY 184
PMRY PY
Sbjct: 221 PMRYRPY 227
>gi|21536704|gb|AAM61036.1| contains similarity to poly(A)-binding protein II [Arabidopsis
thaliana]
Length = 227
Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 134/187 (71%), Gaps = 15/187 (8%)
Query: 9 IETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSR 68
+E + +L+DMK R+KE+EEEA ALR+M AK +M + QDP+ GG S A +EEVDSR
Sbjct: 45 LEPGSSSRDLEDMKKRIKEIEEEAGALREMQAKAEKDMGASQDPS-GGVSAAEKEEVDSR 103
Query: 69 SVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLN 117
S++VGN QHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ EAVQ +L LN
Sbjct: 104 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILN 163
Query: 118 ESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRM 177
ESELHGRQ+KV+ KRTNVPGM+Q R R PF + +P Y PY YG++PRFR
Sbjct: 164 ESELHGRQIKVSAKRTNVPGMRQFR-GRGRPFRPMRGFMPGVP--FYPPYAYGRVPRFRR 220
Query: 178 PMRYSPY 184
PMRY PY
Sbjct: 221 PMRYRPY 227
>gi|224287039|gb|ACN41220.1| unknown [Picea sitchensis]
Length = 201
Score = 208 bits (530), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 120/184 (65%), Positives = 134/184 (72%), Gaps = 23/184 (12%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
EL++MK RLKEMEEEA ALR M AKV EM + QDPAA +S A +EE D+RS++VGN
Sbjct: 24 ELEEMKKRLKEMEEEAAALRDMQAKVEKEMGAVQDPAASAASQATKEEADTRSIYVGNVD 83
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQSCGTVNRVTI TDKFGQPKGYAYVEFL++EAVQ A+ LNESELHGRQ
Sbjct: 84 YACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGYAYVEFLEAEAVQNAILLNESELHGRQ 143
Query: 126 LKVTVKRTNVPGMKQHRPRR-PNPFMVYQSRGAIIPPF----LYSPYGYGKIPRFRMPMR 180
LKVT KRTNVPGMKQ R RR P+M Y+ P+ YSPYGYGK PRFR MR
Sbjct: 144 LKVTAKRTNVPGMKQFRGRRFSAPYMGYR-------PWRPPYPYSPYGYGKAPRFRRAMR 196
Query: 181 YSPY 184
Y PY
Sbjct: 197 YRPY 200
>gi|116780872|gb|ABK21856.1| unknown [Picea sitchensis]
Length = 215
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/184 (65%), Positives = 134/184 (72%), Gaps = 23/184 (12%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
EL++MK RLKEMEEEA ALR M AKV EM + QDPAA +S A +EE D+RS++VGN
Sbjct: 38 ELEEMKKRLKEMEEEAAALRDMQAKVEKEMGAVQDPAASAASQATKEEADTRSIYVGNVD 97
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQSCGTVNRVTI TDKFGQPKGYAYVEFL++EAVQ A+ LNESELHGRQ
Sbjct: 98 YACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGYAYVEFLEAEAVQNAILLNESELHGRQ 157
Query: 126 LKVTVKRTNVPGMKQHRPRR-PNPFMVYQSRGAIIPPF----LYSPYGYGKIPRFRMPMR 180
LKVT KRTNVPGMKQ R RR P+M Y+ P+ YSPYGYGK PRFR MR
Sbjct: 158 LKVTAKRTNVPGMKQFRGRRFSAPYMGYR-------PWRPPYPYSPYGYGKAPRFRRAMR 210
Query: 181 YSPY 184
Y PY
Sbjct: 211 YRPY 214
>gi|225462878|ref|XP_002273112.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Vitis
vinifera]
Length = 186
Score = 205 bits (521), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 112/182 (61%), Positives = 137/182 (75%), Gaps = 25/182 (13%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA--NREEVDSRSVFVGN 74
+++D+ RL++M EE K N+M S QDPAA ++ A +REEVDSRSVFVGN
Sbjct: 17 QIEDLNQRLEQMMEEK-------PKAHNDMPSVQDPAAAAAAAAQASREEVDSRSVFVGN 69
Query: 75 -----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHG 123
QHFQ+CGTVNRVTIR++K+GQPKGYAYVEFL++EAVQEAL LNESELHG
Sbjct: 70 VDYSCTPEEVQQHFQACGTVNRVTIRSNKYGQPKGYAYVEFLETEAVQEALLLNESELHG 129
Query: 124 RQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSP 183
RQLKV+ KRTNVPG+KQ RPRR + ++SR +PP+L PYGYGK+PRFRMPMRY+P
Sbjct: 130 RQLKVSAKRTNVPGLKQFRPRR----VGFRSRSTHMPPYL-CPYGYGKVPRFRMPMRYNP 184
Query: 184 YY 185
YY
Sbjct: 185 YY 186
>gi|296087478|emb|CBI34067.3| unnamed protein product [Vitis vinifera]
Length = 180
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/182 (61%), Positives = 137/182 (75%), Gaps = 25/182 (13%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA--NREEVDSRSVFVGN 74
+++D+ RL++M EE K N+M S QDPAA ++ A +REEVDSRSVFVGN
Sbjct: 11 QIEDLNQRLEQMMEEK-------PKAHNDMPSVQDPAAAAAAAAQASREEVDSRSVFVGN 63
Query: 75 -----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHG 123
QHFQ+CGTVNRVTIR++K+GQPKGYAYVEFL++EAVQEAL LNESELHG
Sbjct: 64 VDYSCTPEEVQQHFQACGTVNRVTIRSNKYGQPKGYAYVEFLETEAVQEALLLNESELHG 123
Query: 124 RQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSP 183
RQLKV+ KRTNVPG+KQ RPRR + ++SR +PP+L PYGYGK+PRFRMPMRY+P
Sbjct: 124 RQLKVSAKRTNVPGLKQFRPRR----VGFRSRSTHMPPYL-CPYGYGKVPRFRMPMRYNP 178
Query: 184 YY 185
YY
Sbjct: 179 YY 180
>gi|413924475|gb|AFW64407.1| hypothetical protein ZEAMMB73_935050 [Zea mays]
Length = 171
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 126/176 (71%), Gaps = 16/176 (9%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN------ 74
MK +LKEMEEEA ALR M AKV EM DP+ S+ +E+VD+RSV+VGN
Sbjct: 1 MKRKLKEMEEEAAALRDMQAKVAKEMQGG-DPSI--STAEAKEQVDARSVYVGNVDYACT 57
Query: 75 -----QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 129
QHFQ+CGTVNRVTI TDKFGQPKG+AYVEFL+ EAVQEAL+LNESELHGRQ+KV
Sbjct: 58 PEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESELHGRQIKVA 117
Query: 130 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 185
KRTNVPGMKQ PR NP+ Y R P F PYGYG+ PRFR PMRY PY+
Sbjct: 118 PKRTNVPGMKQRPPRGYNPYHGYPYRSYGAPYF--PPYGYGRAPRFRRPMRYRPYF 171
>gi|225462880|ref|XP_002273141.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Vitis
vinifera]
Length = 179
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/180 (59%), Positives = 133/180 (73%), Gaps = 28/180 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
+++D+ RL++M EE K N+M P+ ++ A+REEVDSRSVFVGN
Sbjct: 17 QIEDLNQRLEQMMEEK-------PKAHNDM-----PSVQAAAQASREEVDSRSVFVGNVD 64
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQ+CGTVNRVTIR++K+GQPKGYAYVEFL++EAVQEAL LNESELHGRQ
Sbjct: 65 YSCTPEEVQQHFQACGTVNRVTIRSNKYGQPKGYAYVEFLETEAVQEALLLNESELHGRQ 124
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 185
LKV+ KRTNVPG+KQ RPRR + ++SR +PP+L PYGYGK+PRFRMPMRY+PYY
Sbjct: 125 LKVSAKRTNVPGLKQFRPRR----VGFRSRSTHMPPYL-CPYGYGKVPRFRMPMRYNPYY 179
>gi|388498186|gb|AFK37159.1| unknown [Lotus japonicus]
Length = 217
Score = 201 bits (512), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 110/181 (60%), Positives = 132/181 (72%), Gaps = 19/181 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
+L+DMK RLKE+EEEA+ALR+M AKV +M + QD A ++ A +EEVD RS++VGN
Sbjct: 43 DLEDMKKRLKEIEEEASALREMQAKVEKDMGAVQD-AGSSATQAEKEEVDGRSIYVGNVD 101
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQSCGTVNRVTI TDKFGQPKG+AYVEF+++EAVQ A+ LNE ELHGRQ
Sbjct: 102 YACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQNAVMLNELELHGRQ 161
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIP--PFLYSPYGYGKIPRFRMPMRYSP 183
LKV+ KRTNVPGMKQ+ RRP F +SR +P PF Y PY YG P +R PMRY P
Sbjct: 162 LKVSAKRTNVPGMKQYFGRRPAGF---RSRRPFMPYAPF-YPPYAYGS-PWYRRPMRYRP 216
Query: 184 Y 184
Y
Sbjct: 217 Y 217
>gi|224114678|ref|XP_002339510.1| predicted protein [Populus trichocarpa]
gi|222832586|gb|EEE71063.1| predicted protein [Populus trichocarpa]
Length = 212
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/165 (61%), Positives = 123/165 (74%), Gaps = 12/165 (7%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
+L+DMK RLKE+EEEA ALR+M AKV EM + QD ++ A +EEVDSRS++VGN
Sbjct: 49 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSPGASATQAEKEEVDSRSIYVGNVD 108
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ +A+Q AL LNESELHGRQ
Sbjct: 109 YSCTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVDAIQNALLLNESELHGRQ 168
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYG 170
LKV+ KRTNVPGMKQ R RRP+P+ + +SR +P Y YGYG
Sbjct: 169 LKVSAKRTNVPGMKQFRGRRPSPYGL-RSRRPFMPAPFYPAYGYG 212
>gi|194706900|gb|ACF87534.1| unknown [Zea mays]
gi|195622774|gb|ACG33217.1| polyadenylate-binding protein 2 [Zea mays]
Length = 203
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/183 (61%), Positives = 130/183 (71%), Gaps = 20/183 (10%)
Query: 1 MEGDDMDMIETEN--KQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSS 58
++G+D+DM ++ K ELDDMK RLKEMEEEA ALR+M AKV EM DP A S
Sbjct: 15 VDGEDVDMAAGDDATKLQELDDMKRRLKEMEEEAAALREMQAKVAKEMQGV-DPNATTSE 73
Query: 59 LANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQS 107
N+EE+DSRSVF+GN QHF SCGTVNRVTI TDKFGQPKG+AYVEF++
Sbjct: 74 --NKEEMDSRSVFIGNVDYACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFVEV 131
Query: 108 EAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPY 167
EAVQEA+ LNESELHGRQLKV KRTNVPGMKQ R R NP+ + + P+ YSPY
Sbjct: 132 EAVQEAIKLNESELHGRQLKVAPKRTNVPGMKQPRGRGFNPYHGH----PYMRPYGYSPY 187
Query: 168 GYG 170
GYG
Sbjct: 188 GYG 190
>gi|226509296|ref|NP_001152340.1| polyadenylate-binding protein 2 [Zea mays]
gi|195655291|gb|ACG47113.1| polyadenylate-binding protein 2 [Zea mays]
Length = 203
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/183 (61%), Positives = 130/183 (71%), Gaps = 20/183 (10%)
Query: 1 MEGDDMDMIETEN--KQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSS 58
++G+D+DM ++ K ELDDMK RLKEMEEEA ALR+M AKV EM DP A S
Sbjct: 15 VDGEDVDMAAGDDATKLQELDDMKRRLKEMEEEAAALREMQAKVAKEMQGV-DPNATTSE 73
Query: 59 LANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQS 107
N+EE+DSRSVF+GN QHF SCGTVNRVTI TDKFGQPKG+AYVEF++
Sbjct: 74 --NKEEMDSRSVFIGNVDYACTPXXVXQHFNSCGTVNRVTILTDKFGQPKGFAYVEFVEV 131
Query: 108 EAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPY 167
EAVQEA+ LNESELHGRQLKV KRTNVPGMKQ R R NP+ + + P+ YSPY
Sbjct: 132 EAVQEAIKLNESELHGRQLKVAPKRTNVPGMKQPRGRGFNPYHGH----PYMRPYGYSPY 187
Query: 168 GYG 170
GYG
Sbjct: 188 GYG 190
>gi|242092470|ref|XP_002436725.1| hypothetical protein SORBIDRAFT_10g007620 [Sorghum bicolor]
gi|241914948|gb|EER88092.1| hypothetical protein SORBIDRAFT_10g007620 [Sorghum bicolor]
Length = 203
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 112/183 (61%), Positives = 130/183 (71%), Gaps = 20/183 (10%)
Query: 1 MEGDDMDMIETEN--KQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSS 58
++G+D+DM ++ K ELD+MK RLKEMEEEA ALR+M AKV EM DP A S
Sbjct: 15 VDGEDVDMAAGDDATKLQELDEMKRRLKEMEEEAAALREMQAKVAKEMQGV-DPNATTSE 73
Query: 59 LANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQS 107
N+EE+DSRSVFVGN QHF SCGTVNRVTI TDKFGQPKG+AYVEF++
Sbjct: 74 --NKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFVEV 131
Query: 108 EAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPY 167
EAVQEA+ LNESELHGRQLKV KRTNVPGMKQ R R NP+ + + P+ YSPY
Sbjct: 132 EAVQEAVKLNESELHGRQLKVAPKRTNVPGMKQPRGRGFNPYHGH----PYMRPYGYSPY 187
Query: 168 GYG 170
GYG
Sbjct: 188 GYG 190
>gi|388491820|gb|AFK33976.1| unknown [Medicago truncatula]
Length = 170
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/151 (64%), Positives = 113/151 (74%), Gaps = 11/151 (7%)
Query: 1 MEGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA 60
ME DD+DMI +N + +LDDMK RLKEME+EA AL++M AKV EM S QDPA +S
Sbjct: 1 MENDDVDMIGADNNEADLDDMKKRLKEMEDEAAALKEMQAKVEKEMGSVQDPANASASQI 60
Query: 61 NREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEA 109
NREEVD+RS+FVGN QHFQSCGTVNRVTIRTDKFGQPKGYAYVEF++ EA
Sbjct: 61 NREEVDARSIFVGNVDYACTPEDVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFVEVEA 120
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGMKQ 140
VQEAL LNESELHGRQLKV + + K+
Sbjct: 121 VQEALLLNESELHGRQLKVITTKGSCFSEKE 151
>gi|302786636|ref|XP_002975089.1| hypothetical protein SELMODRAFT_102545 [Selaginella moellendorffii]
gi|300157248|gb|EFJ23874.1| hypothetical protein SELMODRAFT_102545 [Selaginella moellendorffii]
Length = 224
Score = 195 bits (495), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 113/184 (61%), Positives = 131/184 (71%), Gaps = 15/184 (8%)
Query: 16 VELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN- 74
EL++MK RLKEME+EA ALR M AKV EM + QDPAA + A++EE D+RSV+VGN
Sbjct: 42 TELEEMKKRLKEMEDEAAALRDMQAKVEKEMGAGQDPAAA-AQQASKEEADARSVYVGNV 100
Query: 75 ----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
QHFQSCGTVNRVTI TDKFGQPKG+AYVEFL+ EAVQ AL LNESELHGR
Sbjct: 101 DYSCTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQNALILNESELHGR 160
Query: 125 QLKVTVKRTNVPGMKQHRPRR--PNPFMVY-QSRGAIIPPFLYSPYGYGKIPRFRMPMRY 181
+K + RTNVPG+KQHR R P+M Y R + P PYG+GK+PRFR PMRY
Sbjct: 161 PIKARISRTNVPGLKQHRGRGGFGAPYMPYFPRRPYMPYPSYPYPYGFGKVPRFRRPMRY 220
Query: 182 SPYY 185
PYY
Sbjct: 221 RPYY 224
>gi|388491050|gb|AFK33591.1| unknown [Medicago truncatula]
Length = 179
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/165 (61%), Positives = 122/165 (73%), Gaps = 15/165 (9%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
EL+DMK RLKE+EEEA+ALR+M AKV EM + QDPA S A +EEVD+RS++VGN
Sbjct: 19 ELEDMKKRLKEIEEEASALREMQAKVEKEMGAVQDPAGSSVSQAEKEEVDARSIYVGNVD 78
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQSCGTVNRVTI TDKFGQPKG+AYVEF++++AVQ AL LNE+ELHGRQ
Sbjct: 79 YACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEADAVQNALILNETELHGRQ 138
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYG 170
LKV+ KRTNVPG+KQ+ RRP F + R +P + PY YG
Sbjct: 139 LKVSAKRTNVPGLKQYG-RRPAGF---RGRRPFMPAPSFPPYAYG 179
>gi|302814589|ref|XP_002988978.1| hypothetical protein SELMODRAFT_159820 [Selaginella moellendorffii]
gi|300143315|gb|EFJ10007.1| hypothetical protein SELMODRAFT_159820 [Selaginella moellendorffii]
Length = 178
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 128/179 (71%), Gaps = 15/179 (8%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN------ 74
MK RLKEME+EA ALR M AKV EM + QDPAA + A++EE D+RSV+VGN
Sbjct: 1 MKKRLKEMEDEAAALRDMQAKVEKEMGAGQDPAAA-AQQASKEEADARSVYVGNVDYSCT 59
Query: 75 -----QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 129
QHFQSCGTVNRVTI TDKFGQPKG+AYVEFL+ EAVQ AL LNESELHGR +KV
Sbjct: 60 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQNALILNESELHGRPIKVA 119
Query: 130 VKRTNVPGMKQHRPRR--PNPFMVY-QSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 185
KRTNVPG+KQHR R P+M Y R + P PYG+GK+PRFR PMRY PYY
Sbjct: 120 AKRTNVPGLKQHRGRGGFGAPYMPYFPRRPYMPYPSYPYPYGFGKVPRFRRPMRYRPYY 178
>gi|255539947|ref|XP_002511038.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550153|gb|EEF51640.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 234
Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 103/181 (56%), Positives = 127/181 (70%), Gaps = 27/181 (14%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQD----------------PAAGGSSLA 60
+L+DMK RLKE+EEEA ALR+M AKV EM + Q ++G ++ A
Sbjct: 54 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQGISHSLPLSIYIVLWSYSSSGSATQA 113
Query: 61 NREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEA 109
+EEVDSRS++VGN QHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ +A
Sbjct: 114 EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVDA 173
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGY 169
VQ AL LNESELHGRQLKV+ KRTN+PGMKQ+R RRPNP+ ++SR +P + PYGY
Sbjct: 174 VQNALLLNESELHGRQLKVSAKRTNIPGMKQYRGRRPNPYSGFRSRRPFMPAPFFPPYGY 233
Query: 170 G 170
G
Sbjct: 234 G 234
>gi|351725805|ref|NP_001237617.1| uncharacterized protein LOC100527545 [Glycine max]
gi|255632582|gb|ACU16641.1| unknown [Glycine max]
Length = 214
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/167 (60%), Positives = 124/167 (74%), Gaps = 14/167 (8%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
EL+DMK RLKE+EEEA+ALR+M AKV EM + +D + ++ REEVD+RS++VGN
Sbjct: 39 ELEDMKKRLKEIEEEASALREMQAKVEKEMGAVRDSSGTSATQVEREEVDARSIYVGNVD 98
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ +AVQ AL LNESELHGRQ
Sbjct: 99 YACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNESELHGRQ 158
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKI 172
LKV+ KRTNVPGMKQ+ RRP F +SR +P + PYGYG++
Sbjct: 159 LKVSAKRTNVPGMKQYFGRRPAGF---RSRRPFMPAPFFPPYGYGRV 202
>gi|217074200|gb|ACJ85460.1| unknown [Medicago truncatula]
gi|388522377|gb|AFK49250.1| unknown [Medicago truncatula]
Length = 217
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/167 (60%), Positives = 124/167 (74%), Gaps = 15/167 (8%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
EL+DMK RLKE+EEEA+ALR+M AKV EM + QDPA S A +EEVD+RS++VGN
Sbjct: 43 ELEDMKKRLKEIEEEASALREMQAKVEKEMGAVQDPAGSSVSQAEKEEVDARSIYVGNVD 102
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQSCGTVNRVTI TDKFGQPKG+AYVEF++++AVQ AL LNE+ELHGRQ
Sbjct: 103 YACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEADAVQNALILNETELHGRQ 162
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKI 172
LKV+ KRTNVPG+KQ+ RRP F + R +P + PY YG++
Sbjct: 163 LKVSAKRTNVPGLKQY-GRRPAGF---RGRRPFMPAPFFPPYAYGRV 205
>gi|357440891|ref|XP_003590723.1| Polyadenylate-binding protein [Medicago truncatula]
gi|217072228|gb|ACJ84474.1| unknown [Medicago truncatula]
gi|355479771|gb|AES60974.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 187
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 113/144 (78%), Gaps = 12/144 (8%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
EL+DMK RLKE+EEEA+ALR+M AKV EM + QDPA S A +EEVD+RS++VGN
Sbjct: 43 ELEDMKKRLKEIEEEASALREMQAKVEKEMGAVQDPAGSSVSQAEKEEVDARSIYVGNVD 102
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQSCGTVNRVTI TDKFGQPKG+AYVEF++++AVQ AL LNE+ELHGRQ
Sbjct: 103 YACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEADAVQNALILNETELHGRQ 162
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPF 149
LKV+ KRTNVPG+KQ+ RRP F
Sbjct: 163 LKVSAKRTNVPGLKQY-GRRPAGF 185
>gi|255633822|gb|ACU17272.1| unknown [Glycine max]
Length = 183
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 94/144 (65%), Positives = 112/144 (77%), Gaps = 11/144 (7%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
EL+DMK RLKE+EEEA+ALR+M AKV EM + QD + ++ A +EEVD+RS++VGN
Sbjct: 39 ELEDMKKRLKEIEEEASALREMQAKVEKEMGAVQDSSGTSATQAEKEEVDARSIYVGNVD 98
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ +AVQ AL LNESELHGRQ
Sbjct: 99 YACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNESELHGRQ 158
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPF 149
LKV+ KRTNVPGMKQ+ RRP F
Sbjct: 159 LKVSAKRTNVPGMKQYFGRRPAGF 182
>gi|238006378|gb|ACR34224.1| unknown [Zea mays]
gi|413952637|gb|AFW85286.1| polyadenylate-binding protein 2 [Zea mays]
Length = 199
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/162 (64%), Positives = 120/162 (74%), Gaps = 18/162 (11%)
Query: 1 MEGDDMDMIETEN--KQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSS 58
++G+D+DM ++ K ELD+MK RLKEMEEEA ALR+M AKV +M QDP A S
Sbjct: 15 VDGEDVDMSAGDDATKLQELDEMKRRLKEMEEEAAALREMQAKVAKDM---QDPNATTSE 71
Query: 59 LANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQS 107
N+EE+DSRSVFVGN QHF SCGTVNRVTI TDKFGQPKG+AYVEF++
Sbjct: 72 --NKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFVEV 129
Query: 108 EAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPF 149
EAVQEA+ LNESELHGRQLKV KRTNVPGMKQ R R NP+
Sbjct: 130 EAVQEAIKLNESELHGRQLKVAPKRTNVPGMKQPRGRGFNPY 171
>gi|226532872|ref|NP_001149957.1| polyadenylate-binding protein 2 [Zea mays]
gi|195635741|gb|ACG37339.1| polyadenylate-binding protein 2 [Zea mays]
Length = 199
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/162 (63%), Positives = 120/162 (74%), Gaps = 18/162 (11%)
Query: 1 MEGDDMDMIETEN--KQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSS 58
++G+D+DM ++ K ELD+MK RLKEMEEEA ALR+M AKV +M QDP A S
Sbjct: 15 VDGEDVDMSAGDDATKLQELDEMKRRLKEMEEEAAALREMQAKVAKDM---QDPNATTSE 71
Query: 59 LANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQS 107
N+EE+DSRSVFVGN QHF SCGTVNRVTI TDKFGQPKG+AYVEF++
Sbjct: 72 --NKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFVEV 129
Query: 108 EAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPF 149
EAVQEA+ LNESELHGRQLKV KRTN+PGMKQ R R NP+
Sbjct: 130 EAVQEAIKLNESELHGRQLKVAPKRTNIPGMKQLRGRGFNPY 171
>gi|168028169|ref|XP_001766601.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682246|gb|EDQ68666.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 238
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/181 (57%), Positives = 121/181 (66%), Gaps = 15/181 (8%)
Query: 1 MEGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA 60
++G+D+ E +K EL++MK RLKEMEEEA ALR M AKV EM Q A A
Sbjct: 33 LKGEDVGTDEVASK--ELEEMKKRLKEMEEEAAALRDMQAKVEKEMGGSQ--ALTNGDQA 88
Query: 61 NREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEA 109
NREE D+RSVFVGN QHFQSCGTVNRVTI TDKFG PKGYAYVEFL+ EA
Sbjct: 89 NREEADARSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGSPKGYAYVEFLEVEA 148
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGY 169
VQ A+ L+ESELH R +KVT KRTNVPGMK +R R P+ Y+ R P+ Y+ YG
Sbjct: 149 VQNAILLSESELHNRPIKVTAKRTNVPGMKGYRGRPYAPYYGYRPRRPFSAPYGYASYGS 208
Query: 170 G 170
G
Sbjct: 209 G 209
>gi|296087007|emb|CBI33270.3| unnamed protein product [Vitis vinifera]
Length = 145
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/111 (79%), Positives = 95/111 (85%)
Query: 75 QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 134
QHFQSCGTVNRVTI TDK+GQPKG+AYVEFL+ EAVQEAL LNESELHGRQLKV KRTN
Sbjct: 35 QHFQSCGTVNRVTILTDKYGQPKGFAYVEFLEVEAVQEALLLNESELHGRQLKVLAKRTN 94
Query: 135 VPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 185
VPGMKQ RPRR NP+M Y+ R +PP+ YSPYGYGK PRFR PMRY PYY
Sbjct: 95 VPGMKQFRPRRFNPYMGYRFRRPYVPPYFYSPYGYGKAPRFRRPMRYMPYY 145
>gi|334188309|ref|NP_001190511.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
gi|332008656|gb|AED96039.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
Length = 265
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 128/216 (59%), Gaps = 51/216 (23%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQ-------------------------- 50
+L+DMK R+KE+EEEA ALR+M AK +M + Q
Sbjct: 53 DLEDMKKRIKEIEEEAGALREMQAKAEKDMGASQGLKLVLLIMILLWVYILESFSESMNL 112
Query: 51 -----------DPAAGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTI 88
+ G S A +EEVDSRS++VGN QHFQSCGTVNRVTI
Sbjct: 113 SRNLLEFEYEKEIINSGVSAAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI 172
Query: 89 RTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNP 148
TDKFGQPKG+AYVEF++ EAVQ +L LNESELHGRQ+KV+ KRTNVPGM+Q R R P
Sbjct: 173 LTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFRG-RGRP 231
Query: 149 FMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 184
F + +P Y PY YG++PRFR PMRY PY
Sbjct: 232 FRPMRGFMPGVP--FYPPYAYGRVPRFRRPMRYRPY 265
>gi|388515797|gb|AFK45960.1| unknown [Lotus japonicus]
Length = 171
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 101/163 (61%), Positives = 120/163 (73%), Gaps = 18/163 (11%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN------ 74
MK RLKE+EEEA+ALR+M AKV +M + QD A ++ A +EEVD RS++VGN
Sbjct: 1 MKKRLKEIEEEASALREMQAKVEKDMGAVQD-AGSSATQAEKEEVDGRSIYVGNVDYACT 59
Query: 75 -----QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 129
QHFQSCGTVNRVTI TDKFGQPKG+AYVEF+++EAVQ A+ LNESELHGRQLKV+
Sbjct: 60 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQNAVMLNESELHGRQLKVS 119
Query: 130 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIP--PFLYSPYGYG 170
KRTNVPGMKQ+ RRP F +SR +P PF Y PY YG
Sbjct: 120 AKRTNVPGMKQYFGRRPAGF---RSRRPFMPYAPF-YPPYAYG 158
>gi|8843848|dbj|BAA97374.1| unnamed protein product [Arabidopsis thaliana]
Length = 267
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 101/166 (60%), Positives = 120/166 (72%), Gaps = 17/166 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
+L+DMK R+KE+EEEA ALR+M AK +M + QDP+ GG S A +EEVDSRS++VGN
Sbjct: 53 DLEDMKKRIKEIEEEAGALREMQAKAEKDMGASQDPS-GGVSAAEKEEVDSRSIYVGNVD 111
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ EAVQ +L LNESELHGRQ
Sbjct: 112 YACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQ 171
Query: 126 LKVTVKRTNVPGMKQHRPR-RPNPFMVYQSRGAIIPPFLYSPYGYG 170
+KV+ KRTNVPGM+Q R R RP M RG + Y PY YG
Sbjct: 172 IKVSAKRTNVPGMRQFRGRGRPFRPM----RGFMPGVPFYPPYAYG 213
>gi|359497541|ref|XP_003635560.1| PREDICTED: polyadenylate-binding protein 2-like, partial [Vitis
vinifera]
Length = 130
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 88/111 (79%), Positives = 95/111 (85%)
Query: 75 QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 134
QHFQSCGTVNRVTI TDK+GQPKG+AYVEFL+ EAVQEAL LNESELHGRQLKV KRTN
Sbjct: 20 QHFQSCGTVNRVTILTDKYGQPKGFAYVEFLEVEAVQEALLLNESELHGRQLKVLAKRTN 79
Query: 135 VPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 185
VPGMKQ RPRR NP+M Y+ R +PP+ YSPYGYGK PRFR PMRY PYY
Sbjct: 80 VPGMKQFRPRRFNPYMGYRFRRPYVPPYFYSPYGYGKAPRFRRPMRYMPYY 130
>gi|115467128|ref|NP_001057163.1| Os06g0219600 [Oryza sativa Japonica Group]
gi|51535367|dbj|BAD37238.1| putative poly(A) binding protein II [Oryza sativa Japonica Group]
gi|113595203|dbj|BAF19077.1| Os06g0219600 [Oryza sativa Japonica Group]
gi|215704439|dbj|BAG93873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765746|dbj|BAG87443.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635211|gb|EEE65343.1| hypothetical protein OsJ_20615 [Oryza sativa Japonica Group]
Length = 204
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/187 (59%), Positives = 131/187 (70%), Gaps = 26/187 (13%)
Query: 1 MEGDDMDMI---ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS 57
++G+D+DM + K ELD+MK RLKEMEEEA ALR+M KV EM DP A S
Sbjct: 15 LDGEDVDMGAPGDEAAKMQELDEMKRRLKEMEEEANALREMQTKVAKEMQG-LDPNA--S 71
Query: 58 SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQ 106
S ++EE+D+RSV+VGN QHF SCGTVNRVTI TDKFGQPKG+AYVEFL+
Sbjct: 72 SSESKEEMDARSVYVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFLE 131
Query: 107 SEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRR---PNPFMVYQSRGAIIPPFL 163
EAVQEA+ LNESELHGRQ+KV KRTNVPGMKQ R R +P+M + GA PF
Sbjct: 132 VEAVQEAVKLNESELHGRQIKVAPKRTNVPGMKQPRGGRGFGGHPYM--RPYGA---PF- 185
Query: 164 YSPYGYG 170
Y+PYGYG
Sbjct: 186 YNPYGYG 192
>gi|413924471|gb|AFW64403.1| polyadenylate-binding protein 2 [Zea mays]
Length = 194
Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 118/180 (65%), Gaps = 34/180 (18%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
ELD+MK +LKEME DP+ S+ +E+VD+RSV+VGN
Sbjct: 38 ELDEMKRKLKEME-------------------GGDPSI--STAEAKEQVDARSVYVGNVD 76
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQ+CGTVNRVTI TDKFGQPKG+AYVEFL+ EAVQEAL+LNESELHGRQ
Sbjct: 77 YACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESELHGRQ 136
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 185
+KV KRTNVPGMKQ PR NP+ Y R P F PYGYG+ PRFR PMRY PY+
Sbjct: 137 IKVAPKRTNVPGMKQRPPRGYNPYHGYPYRSYGAPYF--PPYGYGRAPRFRRPMRYRPYF 194
>gi|195637520|gb|ACG38228.1| polyadenylate-binding protein 2 [Zea mays]
Length = 194
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 118/180 (65%), Gaps = 34/180 (18%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
ELD+MK +LKEM+ DP+ S+ +E+VD+RSV+VGN
Sbjct: 38 ELDEMKRKLKEMQ-------------------GCDPSI--STAEAKEQVDARSVYVGNVD 76
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQ+CGTVNRVTI TDKFGQPKG+AYVEFL+ EAVQEAL+LNESELHGRQ
Sbjct: 77 YACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESELHGRQ 136
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 185
+KV KRTNVPGMKQ PR NP+ Y R P F PYGYG+ PRFR PMRY PY+
Sbjct: 137 IKVAPKRTNVPGMKQRPPRGYNPYHGYPYRSYGAPYF--PPYGYGRAPRFRRPMRYRPYF 194
>gi|167999063|ref|XP_001752237.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696632|gb|EDQ82970.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 156
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/161 (62%), Positives = 110/161 (68%), Gaps = 17/161 (10%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN------ 74
MK RLKEMEEEA ALR M AKV EM QD A + ANREE D+RSVFVGN
Sbjct: 1 MKKRLKEMEEEAAALRDMQAKVEKEMGGSQDSAITSGAQANREEADARSVFVGNVDYSCT 60
Query: 75 -----QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLK-V 128
QHFQSCGTVNRVTI TDKFGQPKG+AYVEFL+ EAVQ A+ L+ESELH R LK V
Sbjct: 61 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQNAILLSESELHNRPLKVV 120
Query: 129 TVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGY 169
T KRTNVPGMK R R P+ Y+ R PF +PYGY
Sbjct: 121 TSKRTNVPGMKGFRGRPYAPYYGYRPR----RPF-SAPYGY 156
>gi|357124786|ref|XP_003564078.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 209
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/186 (56%), Positives = 129/186 (69%), Gaps = 20/186 (10%)
Query: 1 MEGDDMDMIETEN---KQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS 57
++G+D+DM + K ELD+MK RLKEMEEEA ALR+M AKV EM DP A +
Sbjct: 15 VDGEDVDMGAAGDDAAKLHELDEMKRRLKEMEEEAAALREMQAKVAKEMQGG-DPNA--T 71
Query: 58 SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQ 106
+ +EE+DSRSVFVGN QHF SCGTVNRVTI TDKFGQPKG+AYVEF++
Sbjct: 72 TSEAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFVE 131
Query: 107 SEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRP-NPFMVYQSRGAIIPPFLYS 165
+EA+QEA+ L+ESELHGRQ+KV KRTNVPG+KQ R R NP+ + PF ++
Sbjct: 132 AEAIQEAVKLSESELHGRQIKVAPKRTNVPGLKQPRGGRGYNPYGGHPYMRPYGAPF-FN 190
Query: 166 PY-GYG 170
PY GYG
Sbjct: 191 PYGGYG 196
>gi|334187575|ref|NP_001190273.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332004147|gb|AED91530.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 128
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/109 (75%), Positives = 91/109 (83%)
Query: 76 HFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV 135
HFQ+CGTVNRVTI DKFGQPKG+AYVEF++ EAVQEAL LNESELHGRQLKV+ KRTNV
Sbjct: 19 HFQTCGTVNRVTILMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNV 78
Query: 136 PGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 184
PGMKQ+ P R NP M Y+ R +PP+ YSPYGYGK PRFR PMRY PY
Sbjct: 79 PGMKQYHPGRFNPSMGYRFRRPFVPPYFYSPYGYGKAPRFRRPMRYMPY 127
>gi|334188311|ref|NP_001190512.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
gi|332008657|gb|AED96040.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
Length = 142
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 88/142 (61%), Positives = 102/142 (71%), Gaps = 14/142 (9%)
Query: 54 AGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYV 102
GG S A +EEVDSRS++VGN QHFQSCGTVNRVTI TDKFGQPKG+AYV
Sbjct: 4 GGGVSAAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYV 63
Query: 103 EFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPF 162
EF++ EAVQ +L LNESELHGRQ+KV+ KRTNVPGM+Q R R PF + +P
Sbjct: 64 EFVEVEAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFR-GRGRPFRPMRGFMPGVP-- 120
Query: 163 LYSPYGYGKIPRFRMPMRYSPY 184
Y PY YG++PRFR PMRY PY
Sbjct: 121 FYPPYAYGRVPRFRRPMRYRPY 142
>gi|326512910|dbj|BAK03362.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 131
Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 77/111 (69%), Positives = 89/111 (80%), Gaps = 2/111 (1%)
Query: 75 QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 134
QHFQ+CGTVNRVTI TDKFGQPKG+AYVEFL+ EAVQEAL+LNESELHGRQ+KV+ KRTN
Sbjct: 23 QHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESELHGRQIKVSPKRTN 82
Query: 135 VPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 185
VPGMKQ PR +P+ Y R P + PYGYG++PRFR P RY PY+
Sbjct: 83 VPGMKQRPPRGFSPYHAYPYRSYGAP--YFPPYGYGRVPRFRRPTRYRPYF 131
>gi|218197814|gb|EEC80241.1| hypothetical protein OsI_22184 [Oryza sativa Indica Group]
Length = 230
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 122/210 (58%), Gaps = 46/210 (21%)
Query: 1 MEGDDMDMI---ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQ------- 50
++G+D+DM + K ELD+MK RLKEMEEEA ALR+M KV EM
Sbjct: 15 LDGEDVDMGAPGDEAAKMQELDEMKRRLKEMEEEANALREMQTKVAKEMQGCNLLVLISS 74
Query: 51 --------------------DPAAGGSSL--ANREEVDSRSVFVGN-----QHFQSCGTV 83
+P+ SL +R + R + QHF SCGTV
Sbjct: 75 LNLADCVDVLQNVISFHQSVNPSTNDVSLRSWHRVMIAQRVDYACTPEEVQQHFNSCGTV 134
Query: 84 NRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRP 143
NRVTI TDKFGQPKG+AYVEFL+ EAVQEA+ LNESELHGRQ+KV KRTNVPGMKQ R
Sbjct: 135 NRVTILTDKFGQPKGFAYVEFLEVEAVQEAVKLNESELHGRQIKVAPKRTNVPGMKQPRG 194
Query: 144 RR---PNPFMVYQSRGAIIPPFLYSPYGYG 170
R +P+M + GA PF Y+PYGYG
Sbjct: 195 GRGFGGHPYM--RPYGA---PF-YNPYGYG 218
>gi|413936733|gb|AFW71284.1| hypothetical protein ZEAMMB73_459562 [Zea mays]
Length = 228
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/150 (56%), Positives = 101/150 (67%), Gaps = 16/150 (10%)
Query: 16 VELDDMKIRL--KEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVG 73
V L D+ + L +++ A++Q K + M S +P A S N+EE+DSRSVFVG
Sbjct: 72 VRLADIPVNLPQEDISMARVAIKQRPQKNFHGMNSS-NPNATTSE--NKEEMDSRSVFVG 128
Query: 74 N-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELH 122
N QHF SCGTVNRVTI TDKFGQPKG+AYVEF++ EAVQEA+ LNESELH
Sbjct: 129 NVDYACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQEAIKLNESELH 188
Query: 123 GRQLKVTVKRTNVPGMKQHRPRRPNPFMVY 152
GRQLKV KRTNVPGMKQ R R NP+ Y
Sbjct: 189 GRQLKVAPKRTNVPGMKQPRGRGFNPYRPY 218
>gi|414868203|tpg|DAA46760.1| TPA: hypothetical protein ZEAMMB73_590191 [Zea mays]
Length = 306
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/148 (54%), Positives = 99/148 (66%), Gaps = 23/148 (15%)
Query: 19 DDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN---- 74
D+++ + E +EE R A++ N S ++P A S N+EE+DSR VFVGN
Sbjct: 159 DNLQKSVVERKEEYNKAR---AQIFNN--SNRNPNATTSE--NKEEMDSRLVFVGNVDYA 211
Query: 75 -------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLK 127
QHF SCG VNRVTI TDKFGQPKG+AYVEF++ EAVQEA+ LNESELHGRQLK
Sbjct: 212 CTPEEVQQHFNSCGIVNRVTILTDKFGQPKGFAYVEFVEVEAVQEAIKLNESELHGRQLK 271
Query: 128 VTVKRTNVPGMKQHRPR-----RPNPFM 150
V +KRTN+PGMKQ R R RP F+
Sbjct: 272 VALKRTNIPGMKQPRGRGFNQYRPYAFL 299
>gi|414868204|tpg|DAA46761.1| TPA: hypothetical protein ZEAMMB73_590191 [Zea mays]
Length = 261
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/148 (54%), Positives = 99/148 (66%), Gaps = 23/148 (15%)
Query: 19 DDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN---- 74
D+++ + E +EE R A++ N S ++P A S N+EE+DSR VFVGN
Sbjct: 114 DNLQKSVVERKEEYNKAR---AQIFNN--SNRNPNATTSE--NKEEMDSRLVFVGNVDYA 166
Query: 75 -------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLK 127
QHF SCG VNRVTI TDKFGQPKG+AYVEF++ EAVQEA+ LNESELHGRQLK
Sbjct: 167 CTPEEVQQHFNSCGIVNRVTILTDKFGQPKGFAYVEFVEVEAVQEAIKLNESELHGRQLK 226
Query: 128 VTVKRTNVPGMKQHRPR-----RPNPFM 150
V +KRTN+PGMKQ R R RP F+
Sbjct: 227 VALKRTNIPGMKQPRGRGFNQYRPYAFL 254
>gi|242035047|ref|XP_002464918.1| hypothetical protein SORBIDRAFT_01g028780 [Sorghum bicolor]
gi|241918772|gb|EER91916.1| hypothetical protein SORBIDRAFT_01g028780 [Sorghum bicolor]
Length = 209
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 109/182 (59%), Gaps = 34/182 (18%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+++M+ RL+E+E+ + + ++ A ++ ++ EVD RS++VGN
Sbjct: 49 EIEEMRRRLRELEKLEFEIPPAPSH------EEESETAVAATTVDKAEVDVRSIYVGNVD 102
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
QHFQ CGT+NRVTI TD FGQPKG+AYVEF + EAVQ AL LNE+ELHGR
Sbjct: 103 YACSPEEVQQHFQFCGTINRVTILTDSFGQPKGFAYVEFDEVEAVQNALLLNETELHGRP 162
Query: 126 LKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFR--MPMRYSP 183
LKV KRTN+PGMKQ R R VY PF S YGK+PRFR + YSP
Sbjct: 163 LKVCPKRTNIPGMKQSRGRH----SVY--------PFYPS---YGKVPRFRRFLGYSYSP 207
Query: 184 YY 185
YY
Sbjct: 208 YY 209
>gi|384244690|gb|EIE18189.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 210
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 90/141 (63%), Gaps = 15/141 (10%)
Query: 10 ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRS 69
E + EL+ MK RL +ME EA LR+ K + + D G+ A RE+ D+RS
Sbjct: 25 EHADANAELEAMKARLAQMEAEANKLREQQGKGEDSTLGRTD----GADAALREDADNRS 80
Query: 70 VFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNE 118
V+VG HFQSCGTVNRVTI TDKFG PKGYAY+EFL+++AV AL L+
Sbjct: 81 VYVGQVDYACTPEELQMHFQSCGTVNRVTILTDKFGNPKGYAYIEFLETDAVANALLLDS 140
Query: 119 SELHGRQLKVTVKRTNVPGMK 139
SEL GR+LKV KRTNVPG+K
Sbjct: 141 SELRGRELKVLPKRTNVPGLK 161
>gi|303280321|ref|XP_003059453.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459289|gb|EEH56585.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 178
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 85/123 (69%), Gaps = 14/123 (11%)
Query: 28 MEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-----------QH 76
ME+EA LR M AKV EM + G + ANREE DSRS+ VG H
Sbjct: 1 MEDEANKLRDMQAKVEEEMNT---IPGGAEANANREEADSRSIHVGGVDYACTPEELQMH 57
Query: 77 FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVP 136
FQSCGTVNRVTI TDK+ PKG+AYVEFL+++AV AL LN++E+HGR++KV+ KRTNVP
Sbjct: 58 FQSCGTVNRVTILTDKYENPKGFAYVEFLEADAVANALLLNDTEVHGRKIKVSAKRTNVP 117
Query: 137 GMK 139
GMK
Sbjct: 118 GMK 120
>gi|307107787|gb|EFN56029.1| hypothetical protein CHLNCDRAFT_13079, partial [Chlorella
variabilis]
Length = 132
Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/136 (53%), Positives = 89/136 (65%), Gaps = 17/136 (12%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSL--ANREEVDSRSVFVGN 74
EL+ MK RL +ME+EA L++M K E A GG S+ A +EE DSRSV+VGN
Sbjct: 1 ELEAMKARLADMEKEAAKLKEMQDKAQKEAGI----APGGPSVDAAAKEEADSRSVYVGN 56
Query: 75 -----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHG 123
HFQSCGTVNRVTI TDK G PKG+AY+EFL+++AV A L+ SEL
Sbjct: 57 VDYSCTPEELQMHFQSCGTVNRVTILTDKMGNPKGFAYIEFLEADAVTNACLLDGSELRN 116
Query: 124 RQLKVTVKRTNVPGMK 139
R +KV+ KRTNVPGMK
Sbjct: 117 RAIKVSPKRTNVPGMK 132
>gi|255074381|ref|XP_002500865.1| predicted protein [Micromonas sp. RCC299]
gi|226516128|gb|ACO62123.1| predicted protein [Micromonas sp. RCC299]
Length = 216
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 101/148 (68%), Gaps = 13/148 (8%)
Query: 4 DDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE 63
+D + + + + EL++MK RL MEEEA L+ +G++M + A G++ A+R
Sbjct: 20 EDAAVEDDDEESAELEEMKKRLAAMEEEAQKLKDEANAIGDDMNTGD--GASGAADADRA 77
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQE 112
E DSRSV VG +HF++CGTVNRVTI TDK+ PKG+AYVEFL+++AVQ
Sbjct: 78 EADSRSVHVGGVDYATTPEELAKHFEACGTVNRVTILTDKYDNPKGFAYVEFLEADAVQN 137
Query: 113 ALHLNESELHGRQLKVTVKRTNVPGMKQ 140
A+ L ++E+HGR+L+V+ KRTNVPGMKQ
Sbjct: 138 AIKLTDTEIHGRKLRVSAKRTNVPGMKQ 165
>gi|440636403|gb|ELR06322.1| hypothetical protein GMDG_07913 [Geomyces destructans 20631-21]
Length = 209
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 93/148 (62%), Gaps = 26/148 (17%)
Query: 3 GDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANR 62
GDD ET N++ E+ MK R+ EMEEEA LR+M A + + + D ++
Sbjct: 16 GDD----ET-NEEEEISAMKRRVAEMEEEAAKLREMQASLDQQSSEMHD---------DK 61
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAV 110
E++DSRS+FVGN HFQSCG++NRVTI DKF GQPKGYAYVEF + +V
Sbjct: 62 EDIDSRSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPASV 121
Query: 111 QEALHLNESELHGRQLKVTVKRTNVPGM 138
+AL LNES GR LKV KRTN+PGM
Sbjct: 122 AQALVLNESLFRGRNLKVDPKRTNIPGM 149
>gi|427796401|gb|JAA63652.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 300
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 96/149 (64%), Gaps = 18/149 (12%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+QM ++V +M+ PA GGS +L + EVD+RS++VG
Sbjct: 69 ELEAIKARVREMEEEAEKLKQMQSEVEKQMSIS--PAGGGSLGLTLEEKIEVDARSIYVG 126
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N QHF CG++NRVTI DKF G PKG+AY+EF +++Q A+ L+ES
Sbjct: 127 NVDYGATAEELEQHFHGCGSINRVTILCDKFSGHPKGFAYIEFTDKDSIQTAMALDESLF 186
Query: 122 HGRQLKVTVKRTNVPGMK-QHRPRRPNPF 149
GRQ+KV KRTN PG+ +RP P F
Sbjct: 187 RGRQIKVMTKRTNRPGISTTNRPPXPKGF 215
>gi|159476716|ref|XP_001696457.1| poly(A) binding protein [Chlamydomonas reinhardtii]
gi|158282682|gb|EDP08434.1| poly(A) binding protein [Chlamydomonas reinhardtii]
Length = 136
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 89/136 (65%), Gaps = 13/136 (9%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHA--KVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN 74
ELD +K +LKEMEEEA ++ + + A AA + A + EVDSRS+FVGN
Sbjct: 1 ELDALKRKLKEMEEEAARVKALSVSPRSPGGAAGAAAAAAQAQTEAEKAEVDSRSIFVGN 60
Query: 75 -----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHG 123
QHF SCGTVNRVTI TDKFG PK +AYVEFL+ +AV A+ L+ SEL G
Sbjct: 61 VDYGCTPEELQQHFASCGTVNRVTILTDKFGNPKAFAYVEFLEVDAVNNAVLLDNSELRG 120
Query: 124 RQLKVTVKRTNVPGMK 139
RQ+KV+ KRTNVPG+K
Sbjct: 121 RQIKVSHKRTNVPGLK 136
>gi|331215415|ref|XP_003320388.1| apoptosis regulator BCL-W [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309299378|gb|EFP75969.1| apoptosis regulator BCL-W [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 195
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/143 (51%), Positives = 90/143 (62%), Gaps = 16/143 (11%)
Query: 11 TENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEM---ASKQDPAAGGSSLANREEVDS 67
T+ KQ EL+ MK R++EME EA LR+M A+V EM PA G N+E VDS
Sbjct: 22 TQKKQ-ELESMKQRVREMEFEAEKLREMQAQVEKEMNESGQGGHPAPVGGMEENKEVVDS 80
Query: 68 RSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALH 115
RSV+VGN HF SCGT+NR+TI DKF GQPKG+AY+EF V +A
Sbjct: 81 RSVYVGNVDYGSTAEEIQAHFASCGTINRITILCDKFTGQPKGFAYIEFADPMLVPQACL 140
Query: 116 LNESELHGRQLKVTVKRTNVPGM 138
LN+S GRQ+KVT KRTNVPG+
Sbjct: 141 LNDSLFRGRQIKVTPKRTNVPGL 163
>gi|339245105|ref|XP_003378478.1| polyadenylate-binding protein 2 [Trichinella spiralis]
gi|316972604|gb|EFV56277.1| polyadenylate-binding protein 2 [Trichinella spiralis]
Length = 561
Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats.
Identities = 64/144 (44%), Positives = 88/144 (61%), Gaps = 14/144 (9%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE--EVDSRSVFVGN 74
E++ ++ RLKEME EA +R +H++V +M + + ++ L E EVDSRSVFVGN
Sbjct: 34 EIEQIRERLKEMEREAQLIRNLHSEVEKQMTTVLNESSSTIPLTTEEKIEVDSRSVFVGN 93
Query: 75 -----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 122
HF CG +NRVTI D++ G+PKG+AYVEF E+ Q +L + ++
Sbjct: 94 VDYGATAEQLEAHFHGCGAINRVTILCDRYSGRPKGFAYVEFADKESAQASLAMTDTLFR 153
Query: 123 GRQLKVTVKRTNVPGMKQHRPRRP 146
GRQ+KV KRTN PGM R RRP
Sbjct: 154 GRQIKVLEKRTNRPGMGNTRARRP 177
>gi|358378925|gb|EHK16606.1| hypothetical protein TRIVIDRAFT_19040, partial [Trichoderma virens
Gv29-8]
Length = 171
Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/134 (51%), Positives = 84/134 (62%), Gaps = 21/134 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ MK R+ EMEEEA LR+M A + + A D ++E VD+RS+FVGN
Sbjct: 2 EIQAMKRRVAEMEEEAKKLREMQATLEQQSADLAD---------DKESVDARSIFVGNVD 52
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR
Sbjct: 53 YSASPEEVQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGR 112
Query: 125 QLKVTVKRTNVPGM 138
+KVT KRTN+PGM
Sbjct: 113 NIKVTPKRTNIPGM 126
>gi|358391874|gb|EHK41278.1| hypothetical protein TRIATDRAFT_169914, partial [Trichoderma
atroviride IMI 206040]
Length = 167
Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/134 (51%), Positives = 84/134 (62%), Gaps = 21/134 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ MK R+ EMEEEA LR+M A + + A D ++E VD+RS+FVGN
Sbjct: 2 EIQAMKRRVAEMEEEAKKLREMQATLEQQSADLAD---------DKESVDARSIFVGNVD 52
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR
Sbjct: 53 YSASPEEVQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGR 112
Query: 125 QLKVTVKRTNVPGM 138
+KVT KRTN+PGM
Sbjct: 113 NIKVTPKRTNIPGM 126
>gi|340520405|gb|EGR50641.1| predicted protein [Trichoderma reesei QM6a]
Length = 168
Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/134 (51%), Positives = 84/134 (62%), Gaps = 21/134 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ MK R+ EMEEEA LR+M A + + A D ++E VD+RS+FVGN
Sbjct: 2 EIQAMKRRVAEMEEEAKKLREMQATLEQQSADLAD---------DKESVDARSIFVGNVD 52
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR
Sbjct: 53 YSASPEEVQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGR 112
Query: 125 QLKVTVKRTNVPGM 138
+KVT KRTN+PGM
Sbjct: 113 NIKVTPKRTNIPGM 126
>gi|302912552|ref|XP_003050726.1| hypothetical protein NECHADRAFT_40692 [Nectria haematococca mpVI
77-13-4]
gi|256731664|gb|EEU45013.1| hypothetical protein NECHADRAFT_40692 [Nectria haematococca mpVI
77-13-4]
Length = 167
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 84/134 (62%), Gaps = 21/134 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ MK R+ EMEEEA LR+M A + + A D ++E +D+RS+FVGN
Sbjct: 1 EITAMKRRVAEMEEEAKKLREMQATLEQQSADLAD---------DKESIDARSIFVGNVD 51
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR
Sbjct: 52 YSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGR 111
Query: 125 QLKVTVKRTNVPGM 138
+KVT KRTN+PGM
Sbjct: 112 NIKVTPKRTNIPGM 125
>gi|322711381|gb|EFZ02954.1| putative rrm-type rna binding protein [Metarhizium anisopliae ARSEF
23]
Length = 196
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/134 (52%), Positives = 84/134 (62%), Gaps = 21/134 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ MK R+ EMEEEA LR+M A + + A D ++E VD+RS+FVGN
Sbjct: 31 EITAMKRRVAEMEEEAKKLREMQATLEQQSADLAD---------DKESVDARSIFVGNVD 81
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR
Sbjct: 82 YSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALILNESVFKGR 141
Query: 125 QLKVTVKRTNVPGM 138
+KVT KRTNVPGM
Sbjct: 142 NIKVTPKRTNVPGM 155
>gi|322694379|gb|EFY86210.1| putative rrm-type rna binding protein [Metarhizium acridum CQMa
102]
Length = 196
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/134 (52%), Positives = 84/134 (62%), Gaps = 21/134 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ MK R+ EMEEEA LR+M A + + A D ++E VD+RS+FVGN
Sbjct: 31 EITAMKRRVAEMEEEAKKLREMQATLEQQSADLAD---------DKESVDARSIFVGNVD 81
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR
Sbjct: 82 YSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALILNESVFKGR 141
Query: 125 QLKVTVKRTNVPGM 138
+KVT KRTNVPGM
Sbjct: 142 NIKVTPKRTNVPGM 155
>gi|402590193|gb|EJW84124.1| hypothetical protein WUBG_04965 [Wuchereria bancrofti]
Length = 206
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 115/199 (57%), Gaps = 31/199 (15%)
Query: 1 MEGDDM-----DMIETENKQVELDDMKI---RLKEMEEEATALRQMHAKVGNEM--ASKQ 50
+E DD+ D++ + + E DM+ R+KE+EEEA +RQM + V +M ++
Sbjct: 14 VEEDDILDNGSDLLTSTDHMSEDPDMEALTNRMKEIEEEAQLIRQMQSDVEKQMNMSTGS 73
Query: 51 DPAAGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKG 98
+ + +S+ ++ E DSRSV+VGN HF CG+VNRVTI TDKF G PKG
Sbjct: 74 NTSQSVASIEDKIEADSRSVYVGNVDYCSTAEELEAHFHGCGSVNRVTILTDKFTGHPKG 133
Query: 99 YAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK-QHRPRRPNPFMVYQSRGA 157
+AY+EF EAVQ AL L+ES GRQ+KV KRTN PG+ +RP R + RG
Sbjct: 134 FAYIEFADKEAVQTALALDESLFRGRQIKVCAKRTNRPGVSTTNRPPRA------RGRGG 187
Query: 158 --IIPPFLYSPYGYGKIPR 174
+I ++Y+ Y + PR
Sbjct: 188 ARVIVKYIYAGYRARRPPR 206
>gi|427796791|gb|JAA63847.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 249
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 91/137 (66%), Gaps = 17/137 (12%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+QM ++V +M+ PA GGS +L + EVD+RS++VG
Sbjct: 69 ELEAIKARVREMEEEAEKLKQMQSEVEKQMSIS--PAGGGSLGLTLEEKIEVDARSIYVG 126
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N QHF CG++NRVTI DKF G PKG+AY+EF +++Q A+ L+ES
Sbjct: 127 NVDYGATAEELEQHFHGCGSINRVTILCDKFSGHPKGFAYIEFTDKDSIQTAMALDESLF 186
Query: 122 HGRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 187 RGRQIKVMTKRTNRPGI 203
>gi|255939756|ref|XP_002560647.1| Pc16g02770 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585270|emb|CAP92947.1| Pc16g02770 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 191
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 85/134 (63%), Gaps = 21/134 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E++ MK R+ EME EA LR+M A + + S Q+ N+E++D+RS+FVGN
Sbjct: 29 EIEAMKRRVAEMESEAAKLREMQADLDQQTESLQE---------NKEDIDARSIFVGNVD 79
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR
Sbjct: 80 YGASPEEIQAHFQSCGSINRVTILLDKFSGQPKGYAYVEFAEPSLVAQALVLNESVFRGR 139
Query: 125 QLKVTVKRTNVPGM 138
LKV KRTN+PGM
Sbjct: 140 NLKVVPKRTNLPGM 153
>gi|312072775|ref|XP_003139219.1| pabpn1-prov protein [Loa loa]
gi|307765621|gb|EFO24855.1| pabpn1-prov protein [Loa loa]
Length = 214
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 112/192 (58%), Gaps = 31/192 (16%)
Query: 1 MEGDDM-----DMIETENKQVELDDMKI---RLKEMEEEATALRQMHAKVGNEM--ASKQ 50
+E DD+ D++ + + E DM+ R+KE+EEEA +RQM + V +M ++
Sbjct: 14 IEEDDILDNGSDLLTSTDHMSEDPDMEALTNRMKEIEEEAQLIRQMQSDVEKQMNMSTGS 73
Query: 51 DPAAGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKG 98
+ + +S+ ++ E DSRSV+VGN HF CG+VNRVTI TDKF G PKG
Sbjct: 74 NTSQSVASIEDKIEADSRSVYVGNVDYCSTAEELEAHFHGCGSVNRVTILTDKFTGHPKG 133
Query: 99 YAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK-QHRPRRPNPFMVYQSRGA 157
+AY+EF EAVQ AL L+ES GRQ+KV KRTN PG+ +RP R + RG
Sbjct: 134 FAYIEFADKEAVQTALALDESLFRGRQIKVCAKRTNRPGVSTTNRPPRT------RGRGG 187
Query: 158 --IIPPFLYSPY 167
+I ++Y+ Y
Sbjct: 188 TRVIVKYIYAGY 199
>gi|154310272|ref|XP_001554468.1| hypothetical protein BC1G_07056 [Botryotinia fuckeliana B05.10]
gi|347836575|emb|CCD51147.1| hypothetical protein [Botryotinia fuckeliana]
Length = 194
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 87/139 (62%), Gaps = 21/139 (15%)
Query: 13 NKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFV 72
N + E+ MK R+ EMEEEA LR+M A + + ++ ++E++DSRS+FV
Sbjct: 20 NDEEEISAMKRRVAEMEEEAAKLREMQATLDQQSTDLRE---------DKEDIDSRSIFV 70
Query: 73 GN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESE 120
GN HFQSCG++NRVTI DKF G PKGYAYVEF++ V +AL LNES
Sbjct: 71 GNVDYSASPEDIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFVEPSLVAQALVLNESV 130
Query: 121 LHGRQLKVTVKRTNVPGMK 139
GR LKV KRTNVPGM+
Sbjct: 131 FKGRNLKVVPKRTNVPGMQ 149
>gi|425774334|gb|EKV12642.1| hypothetical protein PDIG_42430 [Penicillium digitatum PHI26]
gi|425777024|gb|EKV15220.1| hypothetical protein PDIP_41010 [Penicillium digitatum Pd1]
Length = 191
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 85/134 (63%), Gaps = 21/134 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E++ MK R+ EME EA LR+M A + + S Q+ N+E++D+RS+FVGN
Sbjct: 29 EIEAMKRRVAEMESEAAKLREMQADLDQQSESLQE---------NKEDIDARSIFVGNVD 79
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR
Sbjct: 80 YGASPEEIQAHFQSCGSINRVTILLDKFSGQPKGYAYVEFAEPSLVAQALVLNESVFRGR 139
Query: 125 QLKVTVKRTNVPGM 138
LKV KRTN+PGM
Sbjct: 140 NLKVVPKRTNLPGM 153
>gi|46137511|ref|XP_390447.1| hypothetical protein FG10271.1 [Gibberella zeae PH-1]
Length = 208
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 90/149 (60%), Gaps = 25/149 (16%)
Query: 2 EGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLAN 61
+G +M E E E+ MK R+ EMEEEA LR+M A + + A D +
Sbjct: 31 QGTEMSATEEE----EITAMKRRVAEMEEEAKKLREMQATLEQQSAELAD---------D 77
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 109
+E +D+RS+FVGN HFQSCG++NRVTI DKF GQPKGYAYVEF +
Sbjct: 78 KESIDARSIFVGNVDYSASPEDIQGHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSL 137
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGM 138
V +AL LNES GR +KVT KRTNVPGM
Sbjct: 138 VAQALVLNESMFKGRSIKVTPKRTNVPGM 166
>gi|342887594|gb|EGU87076.1| hypothetical protein FOXB_02470 [Fusarium oxysporum Fo5176]
Length = 205
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/134 (51%), Positives = 84/134 (62%), Gaps = 21/134 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ MK R+ EMEEEA LR+M A + + A D ++E +D+RS+FVGN
Sbjct: 40 EITAMKRRVAEMEEEAKKLREMQATLEQQSADLAD---------DKESIDARSIFVGNVD 90
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR
Sbjct: 91 YSASPEDIQSHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGR 150
Query: 125 QLKVTVKRTNVPGM 138
+KVT KRTNVPGM
Sbjct: 151 NIKVTPKRTNVPGM 164
>gi|408396974|gb|EKJ76125.1| hypothetical protein FPSE_03600 [Fusarium pseudograminearum CS3096]
Length = 207
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 90/149 (60%), Gaps = 25/149 (16%)
Query: 2 EGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLAN 61
+G +M E E E+ MK R+ EMEEEA LR+M A + + A D +
Sbjct: 30 QGTEMSATEEE----EITAMKRRVAEMEEEAKKLREMQATLEQQSAELAD---------D 76
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 109
+E +D+RS+FVGN HFQSCG++NRVTI DKF GQPKGYAYVEF +
Sbjct: 77 KESIDARSIFVGNVDYSASPEDIQGHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSL 136
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGM 138
V +AL LNES GR +KVT KRTNVPGM
Sbjct: 137 VAQALVLNESMFKGRSIKVTPKRTNVPGM 165
>gi|11359595|pir||T49743 probable rrm-type rna binding protein [imported] - Neurospora
crassa
gi|40882336|emb|CAF06158.1| probable RRM-type RNA binding protein [Neurospora crassa]
Length = 215
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 90/148 (60%), Gaps = 26/148 (17%)
Query: 3 GDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANR 62
GDD++ + + E+ MK R+ EMEEEA LR+M A + + + N+
Sbjct: 35 GDDVN-----DDEEEISAMKRRVAEMEEEAAKLREMQASLDQQHHELTE---------NK 80
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAV 110
E++DSRS+FVGN HFQSCG++NRVTI DKF GQPKGYAYVEF + V
Sbjct: 81 EDIDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLV 140
Query: 111 QEALHLNESELHGRQLKVTVKRTNVPGM 138
+AL LNES GR +KV KRTN+PGM
Sbjct: 141 AQALVLNESVFKGRNIKVVPKRTNIPGM 168
>gi|350286752|gb|EGZ67999.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 215
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 90/148 (60%), Gaps = 26/148 (17%)
Query: 3 GDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANR 62
GDD++ + + E+ MK R+ EMEEEA LR+M A + + + N+
Sbjct: 35 GDDVN-----DDEEEISAMKRRVAEMEEEAAKLREMQASLDQQHHELTE---------NK 80
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAV 110
E++DSRS+FVGN HFQSCG++NRVTI DKF GQPKGYAYVEF + V
Sbjct: 81 EDIDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLV 140
Query: 111 QEALHLNESELHGRQLKVTVKRTNVPGM 138
+AL LNES GR +KV KRTN+PGM
Sbjct: 141 AQALVLNESVFKGRNIKVVPKRTNIPGM 168
>gi|345561633|gb|EGX44721.1| hypothetical protein AOL_s00188g59 [Arthrobotrys oligospora ATCC
24927]
Length = 204
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 88/142 (61%), Gaps = 21/142 (14%)
Query: 10 ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRS 69
E N + E+ MK R+ EME EA LR+M A + E + ++ ++EE+D+RS
Sbjct: 18 EDGNDEEEISAMKKRMAEMEAEAQKLREMQANLDKENDNLKE---------DKEEIDARS 68
Query: 70 VFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLN 117
+FVGN HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LN
Sbjct: 69 IFVGNVDYGASPEEIQTHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLN 128
Query: 118 ESELHGRQLKVTVKRTNVPGMK 139
ES GR LKV KRTN+PGM+
Sbjct: 129 ESIFRGRALKVVPKRTNIPGMQ 150
>gi|328860711|gb|EGG09816.1| hypothetical protein MELLADRAFT_29239 [Melampsora larici-populina
98AG31]
Length = 150
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/135 (51%), Positives = 86/135 (63%), Gaps = 13/135 (9%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS-SLANREEVDSRSVFVGN- 74
EL+ MK R++EME EA LR+M A+V EM + G + + +RE VDSRSV+VGN
Sbjct: 1 ELESMKQRVREMEMEAEKLREMQAQVEKEMNEQGGGQEGNNPTEEDREAVDSRSVYVGNV 60
Query: 75 ----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHG 123
HF SCGT+NR+TI DKF GQPKGYAY+EF V +A LN+S G
Sbjct: 61 DYGSTAEEIQAHFSSCGTINRITILCDKFTGQPKGYAYIEFSDPMLVHQACQLNDSLFRG 120
Query: 124 RQLKVTVKRTNVPGM 138
RQ+KVT KRTN+PG
Sbjct: 121 RQIKVTPKRTNLPGF 135
>gi|440461571|gb|ELQ32355.1| polyadenylate-binding protein 2 [Magnaporthe oryzae Y34]
gi|440489256|gb|ELQ68921.1| polyadenylate-binding protein 2 [Magnaporthe oryzae P131]
Length = 213
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/136 (50%), Positives = 85/136 (62%), Gaps = 20/136 (14%)
Query: 15 QVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN 74
Q E+ MK R+ EMEEEA LR+M A + D + S +R++VDSRS+FVGN
Sbjct: 48 QQEISAMKKRVAEMEEEAAKLREMQASL--------DSQSQELSTESRDDVDSRSIFVGN 99
Query: 75 -----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 122
HFQSCG++NRVTI DKF GQPKG+AYVEF + V +AL LNES
Sbjct: 100 VDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGFAYVEFTEPSLVAQALVLNESVFK 159
Query: 123 GRQLKVTVKRTNVPGM 138
GR +KV+ KRTN PGM
Sbjct: 160 GRNIKVSPKRTNYPGM 175
>gi|328768093|gb|EGF78140.1| hypothetical protein BATDEDRAFT_91010 [Batrachochytrium
dendrobatidis JAM81]
Length = 182
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 95/147 (64%), Gaps = 22/147 (14%)
Query: 1 MEGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA 60
+E ++ M ++ +K++E MK R+KEMEEEA L++M A+V EM G S++
Sbjct: 12 IEAPEVAMDDSVDKEIET--MKKRVKEMEEEAAKLKEMQAEVEKEM--------GAQSVS 61
Query: 61 NREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSE 108
++EEVD RSV++GN HFQSCGT+NRVTI DKF G PKG+AY+EF +
Sbjct: 62 DKEEVDFRSVYIGNVDYSATPEEIQAHFQSCGTINRVTILCDKFTGHPKGFAYLEFADAG 121
Query: 109 AVQEALHLNESELHGRQLKVTVKRTNV 135
+V A+ L+ES GR +KVT KRTNV
Sbjct: 122 SVANAVVLSESMFKGRLIKVTAKRTNV 148
>gi|320586503|gb|EFW99173.1| rnp domain containing protein [Grosmannia clavigera kw1407]
Length = 194
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 84/138 (60%), Gaps = 21/138 (15%)
Query: 13 NKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFV 72
N + E+ MK R+ EMEEEA LR+M ++ D N+E+VDSRS+FV
Sbjct: 22 NDEEEISAMKRRVAEMEEEAARLREMQKDTEHQSQELAD---------NKEDVDSRSIFV 72
Query: 73 GN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESE 120
GN HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES
Sbjct: 73 GNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFSEPSLVAQALVLNESV 132
Query: 121 LHGRQLKVTVKRTNVPGM 138
GR +KV KRTN+PGM
Sbjct: 133 FKGRNIKVVPKRTNIPGM 150
>gi|302829278|ref|XP_002946206.1| hypothetical protein VOLCADRAFT_72471 [Volvox carteri f.
nagariensis]
gi|300269021|gb|EFJ53201.1| hypothetical protein VOLCADRAFT_72471 [Volvox carteri f.
nagariensis]
Length = 242
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 94/151 (62%), Gaps = 23/151 (15%)
Query: 12 ENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSL------------ 59
+ ++ +LD +K RLK+MEEEA ++ + + A+ AA G++
Sbjct: 34 DEQERDLDALKRRLKDMEEEAARIKALAGVATDGAAAGTSGAANGAAAAAAAAVAAAAAD 93
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSE 108
+ E+DSRS++VGN QHF CGTVNRVTI TDKFG PKGYAYVEFL+ +
Sbjct: 94 VEKAEIDSRSIYVGNVDYGCTPEELQQHFAQCGTVNRVTILTDKFGNPKGYAYVEFLEVD 153
Query: 109 AVQEALHLNESELHGRQLKVTVKRTNVPGMK 139
AVQ A+ L+ SEL GRQLKV KRTNVPG+K
Sbjct: 154 AVQNAVLLDNSELRGRQLKVLQKRTNVPGLK 184
>gi|429860717|gb|ELA35441.1| rnp domain protein [Colletotrichum gloeosporioides Nara gc5]
Length = 218
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 84/134 (62%), Gaps = 20/134 (14%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ MK R+ EMEEEA LR+M A + + A + ++++VDSRS+FVGN
Sbjct: 48 EISAMKRRVAEMEEEAAKLREMQASLNQQ--------AQDLNTDDKQDVDSRSIFVGNVD 99
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR
Sbjct: 100 YSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESIFKGR 159
Query: 125 QLKVTVKRTNVPGM 138
+KV KRTNVPGM
Sbjct: 160 NIKVVPKRTNVPGM 173
>gi|336260077|ref|XP_003344835.1| hypothetical protein SMAC_06118 [Sordaria macrospora k-hell]
gi|380089032|emb|CCC12976.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 213
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 89/148 (60%), Gaps = 26/148 (17%)
Query: 3 GDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANR 62
GDD + + + E+ MK R+ EMEEEA LR+M A + + + N+
Sbjct: 31 GDDAN-----DDEEEISAMKRRVAEMEEEAAKLREMQATLDQQHHELTE---------NK 76
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAV 110
E++DSRS+FVGN HFQSCG++NRVTI DKF GQPKGYAYVEF + V
Sbjct: 77 EDIDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPNLV 136
Query: 111 QEALHLNESELHGRQLKVTVKRTNVPGM 138
+AL LNES GR +KV KRTN+PGM
Sbjct: 137 AQALVLNESVFKGRNIKVVPKRTNIPGM 164
>gi|389635639|ref|XP_003715472.1| polyadenylate-binding protein 2 [Magnaporthe oryzae 70-15]
gi|351647805|gb|EHA55665.1| polyadenylate-binding protein 2 [Magnaporthe oryzae 70-15]
Length = 193
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 84/134 (62%), Gaps = 20/134 (14%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ MK R+ EMEEEA LR+M A + D + S +R++VDSRS+FVGN
Sbjct: 30 EISAMKKRVAEMEEEAAKLREMQASL--------DSQSQELSTESRDDVDSRSIFVGNVD 81
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF GQPKG+AYVEF + V +AL LNES GR
Sbjct: 82 YSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGFAYVEFTEPSLVAQALVLNESVFKGR 141
Query: 125 QLKVTVKRTNVPGM 138
+KV+ KRTN PGM
Sbjct: 142 NIKVSPKRTNYPGM 155
>gi|320168622|gb|EFW45521.1| RNP domain-containing protein [Capsaspora owczarzaki ATCC 30864]
Length = 224
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 86/134 (64%), Gaps = 18/134 (13%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
+L+ +K ++ EMEEEA LR+M A V ++ G S A++E++D+RSVFVGN
Sbjct: 49 DLEAVKQKVAEMEEEAKKLREMQADVERQLG------VAGLSAASKEDIDARSVFVGNVD 102
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HF SCGTVNRVTI DK+ G PKG+AY+EF +AV A+ LN++ GR
Sbjct: 103 YSSTPEEVQAHFASCGTVNRVTILVDKYTGHPKGFAYLEFADKDAVNNAMSLNDTVFRGR 162
Query: 125 QLKVTVKRTNVPGM 138
QLKVT KRTNVP M
Sbjct: 163 QLKVTPKRTNVPFM 176
>gi|310800127|gb|EFQ35020.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 203
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/133 (50%), Positives = 82/133 (61%), Gaps = 21/133 (15%)
Query: 18 LDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN--- 74
+ MK R+ EMEEEA LR+M A + + + N+E++DSRS+FVGN
Sbjct: 38 ISAMKRRVAEMEEEAAKLREMQASLDQQSRELSE---------NKEDIDSRSIFVGNVDY 88
Query: 75 --------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR
Sbjct: 89 SASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRN 148
Query: 126 LKVTVKRTNVPGM 138
+KV KRTNVPGM
Sbjct: 149 IKVVPKRTNVPGM 161
>gi|340372421|ref|XP_003384742.1| PREDICTED: polyadenylate-binding protein 2-like [Amphimedon
queenslandica]
Length = 273
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/135 (48%), Positives = 89/135 (65%), Gaps = 13/135 (9%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNE-MASKQDPAAGGSSLANREEVDSRSVFVGN- 74
E++ +K R+KEMEEEA L++M +V E M SK ++ + E DSRSV+VGN
Sbjct: 85 EIEAIKARVKEMEEEAEKLKEMQGEVEKELMGSKPAQTNNFPTMEEKLESDSRSVYVGNV 144
Query: 75 ----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHG 123
QHF CG++NRVTI DK+ G PKG+AYVEF++S++V+ AL L+ES G
Sbjct: 145 DYQATAEELGQHFNGCGSINRVTILCDKYSGHPKGFAYVEFIESDSVKMALDLDESLFRG 204
Query: 124 RQLKVTVKRTNVPGM 138
RQ+KVT KRTN PG+
Sbjct: 205 RQIKVTAKRTNRPGL 219
>gi|367041013|ref|XP_003650887.1| hypothetical protein THITE_2110808 [Thielavia terrestris NRRL 8126]
gi|346998148|gb|AEO64551.1| hypothetical protein THITE_2110808 [Thielavia terrestris NRRL 8126]
Length = 193
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 91/144 (63%), Gaps = 21/144 (14%)
Query: 7 DMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVD 66
D ++ +N++ E+ MK R+ EME EA LR+M A + S+QD + ++E+VD
Sbjct: 16 DHVDADNEEEEISAMKRRVAEMEAEAAKLREMQASLDQ---SRQDLSE------DKEDVD 66
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL 114
+RS+FVGN HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL
Sbjct: 67 NRSIFVGNVDYSTSPEELQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPNLVAQAL 126
Query: 115 HLNESELHGRQLKVTVKRTNVPGM 138
LN+S GR +KV KRTN+PGM
Sbjct: 127 VLNDSVFKGRNIKVEPKRTNIPGM 150
>gi|336466383|gb|EGO54548.1| hypothetical protein NEUTE1DRAFT_69316 [Neurospora tetrasperma FGSC
2508]
Length = 229
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 83/134 (61%), Gaps = 21/134 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ MK R+ EMEEEA LR+M A + + + N+E++DSRS+FVGN
Sbjct: 58 EISAMKRRVAEMEEEAAKLREMQASLDQQHHELTE---------NKEDIDSRSIFVGNVD 108
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR
Sbjct: 109 YSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGR 168
Query: 125 QLKVTVKRTNVPGM 138
+KV KRTN+PGM
Sbjct: 169 NIKVVPKRTNIPGM 182
>gi|164426633|ref|XP_957585.2| polyadenylate-binding protein 2 [Neurospora crassa OR74A]
gi|157071415|gb|EAA28349.2| polyadenylate-binding protein 2 [Neurospora crassa OR74A]
Length = 229
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 83/134 (61%), Gaps = 21/134 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ MK R+ EMEEEA LR+M A + + + N+E++DSRS+FVGN
Sbjct: 58 EISAMKRRVAEMEEEAAKLREMQASLDQQHHELTE---------NKEDIDSRSIFVGNVD 108
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR
Sbjct: 109 YSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGR 168
Query: 125 QLKVTVKRTNVPGM 138
+KV KRTN+PGM
Sbjct: 169 NIKVVPKRTNIPGM 182
>gi|402085387|gb|EJT80285.1| polyadenylate-binding protein 2 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 200
Score = 122 bits (305), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 90/151 (59%), Gaps = 23/151 (15%)
Query: 2 EGDDMD--MIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSL 59
E DD D E N + E+ MK R+ EMEEEA LR+M A + ++ +
Sbjct: 16 EQDDNDHGAGEDGNDEEEISAMKKRVAEMEEEAAKLREMQANLDHQTQELSE-------- 67
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQS 107
+R++VDSRS+FVGN HFQSCG++NRVTI DKF GQPKGYAYVEF +
Sbjct: 68 -SRDDVDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEP 126
Query: 108 EAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
V +AL LNES GR +KV KRTN PGM
Sbjct: 127 SLVAQALVLNESVFKGRNIKVVPKRTNYPGM 157
>gi|406860694|gb|EKD13751.1| polyadenylate-binding protein 2 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 194
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 83/134 (61%), Gaps = 21/134 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ MK R+ EMEEEA LR+M A + + D ++E++DSRS+FVGN
Sbjct: 23 EISQMKKRVAEMEEEAAKLREMQASLDVQSHDLSD---------DKEDIDSRSIFVGNVD 73
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HF+SCG++NRVTI DKF G PKGYAYVEF + V +AL LN+S HGR
Sbjct: 74 YSATPEDIQAHFESCGSINRVTILLDKFTGHPKGYAYVEFTEPTLVAQALVLNDSMFHGR 133
Query: 125 QLKVTVKRTNVPGM 138
LKV KRTN+PGM
Sbjct: 134 NLKVVPKRTNLPGM 147
>gi|380491263|emb|CCF35443.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 203
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 81/130 (62%), Gaps = 21/130 (16%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN------ 74
MK R+ EMEEEA LR+M A + + + N+E++DSRS+FVGN
Sbjct: 41 MKRRVAEMEEEAAKLREMQASLDQQSRELSE---------NKEDIDSRSIFVGNVDYSAS 91
Query: 75 -----QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR +KV
Sbjct: 92 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKV 151
Query: 129 TVKRTNVPGM 138
KRTNVPGM
Sbjct: 152 VPKRTNVPGM 161
>gi|407928590|gb|EKG21444.1| hypothetical protein MPH_01242 [Macrophomina phaseolina MS6]
Length = 221
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 87/138 (63%), Gaps = 21/138 (15%)
Query: 13 NKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFV 72
N + E+ MK R++EME EA LR+M A + ++ + ++ N+E++D+RSVFV
Sbjct: 45 NDEEEITAMKKRVQEMEAEAAKLREMQASLDSQTETLRE---------NKEDIDARSVFV 95
Query: 73 GN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESE 120
GN HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES
Sbjct: 96 GNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQALVLNESV 155
Query: 121 LHGRQLKVTVKRTNVPGM 138
GR +KV KRTN+PGM
Sbjct: 156 FRGRNIKVVPKRTNLPGM 173
>gi|189195646|ref|XP_001934161.1| polyadenylate-binding protein 2 (Poly(A)-binding protein 2)
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187980040|gb|EDU46666.1| polyadenylate-binding protein 2 (Poly(A)-binding protein 2)
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 207
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 91/149 (61%), Gaps = 21/149 (14%)
Query: 2 EGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLAN 61
E + +D E N++ E+ M+ R++EMEEEA LRQM A + NE ++ +
Sbjct: 12 EDERLDTAEDPNEEEEISAMRRRVQEMEEEAQKLRQMQAAIDNERHEMRE---------S 62
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 109
+E+VD+RSVFVGN HFQS G++NRVTI DKF G PKGYAYVEF +
Sbjct: 63 KEDVDARSVFVGNVDYGASPEEIQAHFQSIGSINRVTILLDKFTGHPKGYAYVEFTEPHL 122
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGM 138
V EAL L+ SE R LKV KRTN+PGM
Sbjct: 123 VNEALVLDGSEFRNRNLKVVPKRTNLPGM 151
>gi|302421908|ref|XP_003008784.1| polyadenylate-binding protein [Verticillium albo-atrum VaMs.102]
gi|261351930|gb|EEY14358.1| polyadenylate-binding protein [Verticillium albo-atrum VaMs.102]
Length = 205
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 81/132 (61%), Gaps = 21/132 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ MK R+ EMEEEA LR+M A + + D N+E++DSRS+FVGN
Sbjct: 39 EISAMKRRVAEMEEEAAKLREMQATLDTQTQDVSD---------NKEDIDSRSIFVGNVD 89
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR
Sbjct: 90 YSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGR 149
Query: 125 QLKVTVKRTNVP 136
+KV KRTN+P
Sbjct: 150 NIKVVPKRTNIP 161
>gi|116201543|ref|XP_001226583.1| hypothetical protein CHGG_08656 [Chaetomium globosum CBS 148.51]
gi|88177174|gb|EAQ84642.1| hypothetical protein CHGG_08656 [Chaetomium globosum CBS 148.51]
Length = 250
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 90/144 (62%), Gaps = 21/144 (14%)
Query: 7 DMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVD 66
D +N + E+ MK+R+ EME EA LR+M A + ++QD + ++E++D
Sbjct: 75 DHANGDNDEEEISAMKLRVAEMEAEAAKLREMQASLDQ---ARQDLSE------DKEDID 125
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL 114
+RS+FVGN HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL
Sbjct: 126 NRSIFVGNVDYSTSPEELQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFSEPNLVAQAL 185
Query: 115 HLNESELHGRQLKVTVKRTNVPGM 138
LN+S GR +KV KRTN+PGM
Sbjct: 186 VLNDSVFKGRNIKVEPKRTNIPGM 209
>gi|346969940|gb|EGY13392.1| polyadenylate-binding protein [Verticillium dahliae VdLs.17]
Length = 205
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 81/132 (61%), Gaps = 21/132 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ MK R+ EMEEEA LR+M A + + D N+E++DSRS+FVGN
Sbjct: 39 EISAMKRRVAEMEEEAAKLREMQATLDTQTQDISD---------NKEDIDSRSIFVGNVD 89
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR
Sbjct: 90 YSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGR 149
Query: 125 QLKVTVKRTNVP 136
+KV KRTN+P
Sbjct: 150 NIKVVPKRTNIP 161
>gi|346326841|gb|EGX96437.1| RNP domain-containing protein [Cordyceps militaris CM01]
Length = 201
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 88/143 (61%), Gaps = 23/143 (16%)
Query: 5 DMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE 64
D +M TE + E+ MK R+ EME+EA LR+M A + + AS D ++E
Sbjct: 25 DGEMAGTEEE--EISAMKRRVAEMEQEAEKLREMQASLEQQSASLAD---------DKES 73
Query: 65 VDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQE 112
VDSRS+FVGN HFQSCG++NRVTI DKF GQPKGYAYVEF + V +
Sbjct: 74 VDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFSGQPKGYAYVEFTEPSLVAQ 133
Query: 113 ALHLNESELHGRQLKVTVKRTNV 135
AL LNES GR +KVT KRTNV
Sbjct: 134 ALVLNESVFKGRNIKVTSKRTNV 156
>gi|70995100|ref|XP_752316.1| RNP domain protein [Aspergillus fumigatus Af293]
gi|66849951|gb|EAL90278.1| RNP domain protein [Aspergillus fumigatus Af293]
gi|159131072|gb|EDP56185.1| RNP domain protein [Aspergillus fumigatus A1163]
Length = 215
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 84/134 (62%), Gaps = 21/134 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ MK R+ EME EA LR+M A + + S ++ ++EE+D+RS+FVGN
Sbjct: 50 EIAAMKRRVAEMESEAAKLREMQATLDQQSESLRE---------DKEEIDARSIFVGNVD 100
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR
Sbjct: 101 YGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNESVFRGR 160
Query: 125 QLKVTVKRTNVPGM 138
LKV KRTN+PGM
Sbjct: 161 NLKVVPKRTNLPGM 174
>gi|330933365|ref|XP_003304145.1| hypothetical protein PTT_16602 [Pyrenophora teres f. teres 0-1]
gi|311319437|gb|EFQ87756.1| hypothetical protein PTT_16602 [Pyrenophora teres f. teres 0-1]
Length = 193
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 90/148 (60%), Gaps = 21/148 (14%)
Query: 2 EGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLAN 61
E + +D E N++ E+ M+ R++EMEEEA LRQM A + NE ++ +
Sbjct: 12 EDERLDTAEDPNEEEEISAMRRRVQEMEEEAQKLRQMQAAIDNERHEMRE---------S 62
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 109
+E+VD+RSVFVGN HFQS G++NRVTI DKF G PKGYAYVEF +
Sbjct: 63 KEDVDARSVFVGNVDYGASPEEIQAHFQSIGSINRVTILLDKFTGHPKGYAYVEFTEPHL 122
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPG 137
V EAL L+ SE R LKV KRTN+PG
Sbjct: 123 VNEALVLDNSEFRSRNLKVVPKRTNLPG 150
>gi|121702091|ref|XP_001269310.1| RNP domain protein [Aspergillus clavatus NRRL 1]
gi|119397453|gb|EAW07884.1| RNP domain protein [Aspergillus clavatus NRRL 1]
Length = 188
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 82/130 (63%), Gaps = 21/130 (16%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN------ 74
MK R+ EME EA LR+M A + + S ++ ++EE+D+RS+FVGN
Sbjct: 29 MKKRVAEMESEAAKLREMQATLDQQSESLRE---------DKEEIDARSIFVGNVDYGAS 79
Query: 75 -----QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR LKV
Sbjct: 80 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNESVFRGRNLKV 139
Query: 129 TVKRTNVPGM 138
KRTN+PGM
Sbjct: 140 VPKRTNLPGM 149
>gi|119496085|ref|XP_001264816.1| RNP domain protein [Neosartorya fischeri NRRL 181]
gi|119412978|gb|EAW22919.1| RNP domain protein [Neosartorya fischeri NRRL 181]
Length = 190
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 82/130 (63%), Gaps = 21/130 (16%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN------ 74
MK R+ EME EA LR+M A + + S ++ ++EE+D+RS+FVGN
Sbjct: 29 MKRRVAEMESEAAKLREMQATLDQQSESLRE---------DKEEIDARSIFVGNVDYGAS 79
Query: 75 -----QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR LKV
Sbjct: 80 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNESVFRGRNLKV 139
Query: 129 TVKRTNVPGM 138
KRTN+PGM
Sbjct: 140 VPKRTNLPGM 149
>gi|226291492|gb|EEH46920.1| hypothetical protein PADG_03018 [Paracoccidioides brasiliensis
Pb18]
Length = 264
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 86/138 (62%), Gaps = 21/138 (15%)
Query: 13 NKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFV 72
+++ E+ MK R+ EME EA LR+M A + + S ++ ++E++D+RS+FV
Sbjct: 96 DEEEEIAAMKKRVAEMESEAAKLREMQASLDQQSESLRE---------DKEDIDARSIFV 146
Query: 73 GN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESE 120
GN HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES
Sbjct: 147 GNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQALVLNESV 206
Query: 121 LHGRQLKVTVKRTNVPGM 138
GR LKV KRTN+PGM
Sbjct: 207 FRGRNLKVVPKRTNLPGM 224
>gi|145239151|ref|XP_001392222.1| polyadenylate-binding protein 2 [Aspergillus niger CBS 513.88]
gi|134076726|emb|CAK39785.1| unnamed protein product [Aspergillus niger]
Length = 189
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 87/141 (61%), Gaps = 21/141 (14%)
Query: 10 ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRS 69
E + + E+ MK R+ EME EA LR+M A + + + ++ ++EE+D+RS
Sbjct: 18 EAGDDEEEIAAMKKRVAEMESEAAKLREMQATLDQQSENLRE---------DKEEIDARS 68
Query: 70 VFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLN 117
VFVGN HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LN
Sbjct: 69 VFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLN 128
Query: 118 ESELHGRQLKVTVKRTNVPGM 138
ES GR LKV KRTN+PGM
Sbjct: 129 ESVFRGRNLKVVPKRTNLPGM 149
>gi|350629412|gb|EHA17785.1| hypothetical protein ASPNIDRAFT_55885 [Aspergillus niger ATCC 1015]
Length = 192
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 84/134 (62%), Gaps = 21/134 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ MK R+ EME EA LR+M A + + + ++ ++EE+D+RSVFVGN
Sbjct: 28 EIAAMKKRVAEMESEAAKLREMQATLDQQSENLRE---------DKEEIDARSVFVGNVD 78
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR
Sbjct: 79 YGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNESVFRGR 138
Query: 125 QLKVTVKRTNVPGM 138
LKV KRTN+PGM
Sbjct: 139 NLKVVPKRTNLPGM 152
>gi|358370907|dbj|GAA87517.1| RNP domain protein [Aspergillus kawachii IFO 4308]
Length = 190
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/141 (47%), Positives = 87/141 (61%), Gaps = 21/141 (14%)
Query: 10 ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRS 69
E + + E+ MK R+ EME EA LR+M A + + + ++ ++EE+D+RS
Sbjct: 18 EAGDDEEEIAAMKKRVAEMESEAAKLREMQATLDQQSENLRE---------DKEEIDARS 68
Query: 70 VFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLN 117
+FVGN HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LN
Sbjct: 69 IFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLN 128
Query: 118 ESELHGRQLKVTVKRTNVPGM 138
ES GR LKV KRTN+PGM
Sbjct: 129 ESVFRGRNLKVVPKRTNLPGM 149
>gi|400601143|gb|EJP68786.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 194
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 82/131 (62%), Gaps = 21/131 (16%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ MK R+ EMEEEA LR+M A + + AS D ++E VD+RS+FVGN
Sbjct: 29 EISAMKRRVAEMEEEAKKLREMQASLEQQSASLAD---------DKESVDARSIFVGNVD 79
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR
Sbjct: 80 YSASPEEIQAHFQSCGSINRVTILLDKFSGQPKGYAYVEFTEPSLVAQALVLNESVFKGR 139
Query: 125 QLKVTVKRTNV 135
+KVT KRTNV
Sbjct: 140 NIKVTPKRTNV 150
>gi|451855129|gb|EMD68421.1| hypothetical protein COCSADRAFT_272630 [Cochliobolus sativus
ND90Pr]
gi|452004159|gb|EMD96615.1| hypothetical protein COCHEDRAFT_1018478 [Cochliobolus
heterostrophus C5]
Length = 206
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 90/149 (60%), Gaps = 21/149 (14%)
Query: 2 EGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLAN 61
E + +D E N++ E+ M+ R++EMEEEA LRQM + NE ++ +
Sbjct: 12 EDERLDTAEDPNEEEEISAMRRRVQEMEEEAQKLRQMQQAIDNERHEMRE---------S 62
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 109
+E+VD+RSVFVGN HFQS G++NRVTI DKF G PKGYAYVEF +
Sbjct: 63 KEDVDARSVFVGNVDYGASPEEIQAHFQSIGSINRVTILLDKFTGHPKGYAYVEFTEPHL 122
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGM 138
V EAL L+ S+ R LKV KRTN+PGM
Sbjct: 123 VNEALVLDNSQFRNRNLKVVPKRTNLPGM 151
>gi|164662126|ref|XP_001732185.1| hypothetical protein MGL_0778 [Malassezia globosa CBS 7966]
gi|159106087|gb|EDP44971.1| hypothetical protein MGL_0778 [Malassezia globosa CBS 7966]
Length = 215
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 86/141 (60%), Gaps = 13/141 (9%)
Query: 10 ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRS 69
E + + +++ MK R+ EME EA LR+M+ +V S AA S + EVD RS
Sbjct: 36 EADAEDADIEAMKRRVAEMEAEAAKLREMN-EVAERDISGTASAASHPSEEEKMEVDGRS 94
Query: 70 VFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLN 117
++VGN QHFQSCGT+NRVTI DKF G PKG+AYVEF S V+ A LN
Sbjct: 95 IYVGNVDYGATPEEIQQHFQSCGTINRVTILCDKFTGHPKGFAYVEFADSSFVENAAVLN 154
Query: 118 ESELHGRQLKVTVKRTNVPGM 138
ES GR LKVT KRTNVPG+
Sbjct: 155 ESLFRGRLLKVTPKRTNVPGI 175
>gi|342320561|gb|EGU12501.1| Polyadenylate-binding protein 2 [Rhodotorula glutinis ATCC 204091]
Length = 238
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 81/137 (59%), Gaps = 16/137 (11%)
Query: 16 VELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLAN-----REEVDSRSV 70
EL MK R+ EME EA LR++ A + G S N R+ VD+RS+
Sbjct: 58 AELAAMKARVAEMEAEAAKLRELTAASEAAAGGGSAASNGDGSDVNMSDEDRQAVDARSI 117
Query: 71 FVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNES 119
+VGN QHF SCGT+NRVTI DK+ PKGYAYVEF + VQ ALHLNES
Sbjct: 118 YVGNVDYHATPEEIQQHFASCGTINRVTILFDKYTGPKGYAYVEFAEPSLVQNALHLNES 177
Query: 120 ELHGRQLKVTVKRTNVP 136
L GRQ+KV+ KRTN+P
Sbjct: 178 VLRGRQIKVSEKRTNLP 194
>gi|67521766|ref|XP_658944.1| hypothetical protein AN1340.2 [Aspergillus nidulans FGSC A4]
gi|40746367|gb|EAA65523.1| hypothetical protein AN1340.2 [Aspergillus nidulans FGSC A4]
gi|259488327|tpe|CBF87685.1| TPA: RNP domain protein (AFU_orthologue; AFUA_1G09490) [Aspergillus
nidulans FGSC A4]
Length = 187
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 82/130 (63%), Gaps = 21/130 (16%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN------ 74
MK R+ EME EA LR+M A + + S ++ ++E++D+RS+FVGN
Sbjct: 30 MKRRVAEMESEAAKLREMQATLDQQSESLKE---------DKEDIDARSIFVGNVDYGAS 80
Query: 75 -----QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR LKV
Sbjct: 81 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNESVFRGRNLKV 140
Query: 129 TVKRTNVPGM 138
KRTN+PGM
Sbjct: 141 VPKRTNLPGM 150
>gi|169763928|ref|XP_001727864.1| polyadenylate-binding protein 2 [Aspergillus oryzae RIB40]
gi|83770892|dbj|BAE61025.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871171|gb|EIT80336.1| splicing factor RNPS1, SR protein superfamily [Aspergillus oryzae
3.042]
Length = 187
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 84/134 (62%), Gaps = 21/134 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ MK R+ EME EA LR+M A + + + ++ ++EE+D+RS+FVGN
Sbjct: 25 EIAAMKRRVAEMESEAAKLREMQATLDQQSENLRE---------DKEEIDARSIFVGNVD 75
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR
Sbjct: 76 YGASPEEIQAHFQSCGSINRVTILLDKFSGQPKGYAYVEFAEPSLVAQALVLNESVFRGR 135
Query: 125 QLKVTVKRTNVPGM 138
LKV KRTN+PGM
Sbjct: 136 NLKVVPKRTNLPGM 149
>gi|242767348|ref|XP_002341352.1| RNP domain protein [Talaromyces stipitatus ATCC 10500]
gi|218724548|gb|EED23965.1| RNP domain protein [Talaromyces stipitatus ATCC 10500]
Length = 188
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 81/130 (62%), Gaps = 21/130 (16%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN------ 74
MK R+ EME EA LR+M + E S ++ ++E++D+RS+FVGN
Sbjct: 29 MKKRVAEMESEAAKLREMQQTLDAESESLRE---------DKEDIDARSIFVGNVDYGAS 79
Query: 75 -----QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR LKV
Sbjct: 80 PEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFAEPSLVAQALVLNESVFRGRNLKV 139
Query: 129 TVKRTNVPGM 138
T KRTNVPGM
Sbjct: 140 TPKRTNVPGM 149
>gi|145348085|ref|XP_001418487.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578716|gb|ABO96780.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 144
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 86/134 (64%), Gaps = 11/134 (8%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ M+ RLKEME+EA L+ H KV + MA+++ A ++E D+RSV+VG
Sbjct: 11 EIAAMQRRLKEMEDEAEKLKGEHEKVDDAMAAEEAGKNPEEEAAKKQEADARSVYVGQVD 70
Query: 75 ---------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
F S GTVNRVTI DKF PKG+AYVEFL+ +AV A+ L+ +E+ GR+
Sbjct: 71 YASTPEDLANAFASAGTVNRVTILHDKFDNPKGFAYVEFLEPDAVHNAILLDGTEIRGRK 130
Query: 126 LKVTVKRTNVPGMK 139
+KV+ KRTNVPGMK
Sbjct: 131 IKVSAKRTNVPGMK 144
>gi|390362827|ref|XP_799120.2| PREDICTED: polyadenylate-binding protein 2-like [Strongylocentrotus
purpuratus]
Length = 249
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 93/166 (56%), Gaps = 29/166 (17%)
Query: 2 EGDDMDMIETEN--------------KQVELDDMKIRLKEMEEEATALRQMHAKVGNEMA 47
EGDD + TEN + EL+ +K R++EMEEEA L++M +V +M
Sbjct: 19 EGDDSLLSPTENVSMNLEPTEENAGIEDAELEAIKARVREMEEEAEKLKEMQNEVDKQMN 78
Query: 48 SKQDPAAGGS---SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF 93
P A + SL + EVD+RSV+VGN HF CG +NRVTI DKF
Sbjct: 79 LSSPPPAQAAPHLSLEEKGEVDARSVYVGNVDYSATAEELESHFHGCGPINRVTILCDKF 138
Query: 94 -GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
G PKGYAYVEF++ +++ A LN S GRQ++V KRTN PG+
Sbjct: 139 TGHPKGYAYVEFVEKDSIDTACTLNLSLFKGRQIRVNAKRTNRPGI 184
>gi|340939483|gb|EGS20105.1| putative poly(A) binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 211
Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 87/147 (59%), Gaps = 24/147 (16%)
Query: 2 EGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLAN 61
+G D D N++ E+ MK R+ EME EA LR+M A + A + +
Sbjct: 20 DGTDAD---DANEEEEISAMKRRVAEMEAEAAKLREMQASLDQARADLTE---------D 67
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 109
+EEVDSRS+FVGN HFQSCG++NRVTI DKF GQPKGYAYVEF +
Sbjct: 68 KEEVDSRSIFVGNVDYSTSPEELQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSL 127
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVP 136
V +AL LN+S GR +KV KRTN+P
Sbjct: 128 VAQALVLNDSVFKGRNIKVAPKRTNIP 154
>gi|212528088|ref|XP_002144201.1| RNP domain protein [Talaromyces marneffei ATCC 18224]
gi|210073599|gb|EEA27686.1| RNP domain protein [Talaromyces marneffei ATCC 18224]
Length = 190
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 81/130 (62%), Gaps = 21/130 (16%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN------ 74
MK R+ EME EA LR+M + E S ++ ++E++D+RS+FVGN
Sbjct: 29 MKKRVAEMESEAAKLREMQQTLDAESESLRE---------DKEDIDARSIFVGNVDYGAS 79
Query: 75 -----QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR LKV
Sbjct: 80 PEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFAEPSLVAQALVLNESVFRGRNLKV 139
Query: 129 TVKRTNVPGM 138
T KRTNVPGM
Sbjct: 140 TPKRTNVPGM 149
>gi|295668084|ref|XP_002794591.1| hypothetical protein PAAG_03136 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|225679740|gb|EEH18024.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb03]
gi|226286007|gb|EEH41573.1| hypothetical protein PAAG_03136 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 188
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 86/138 (62%), Gaps = 21/138 (15%)
Query: 13 NKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFV 72
+++ E+ MK R+ EME EA LR+M A + + S ++ ++E++D+RS+FV
Sbjct: 20 DEEEEIAAMKKRVAEMESEAAKLREMQASLDQQSESLRE---------DKEDIDARSIFV 70
Query: 73 GN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESE 120
GN HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES
Sbjct: 71 GNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQALVLNESV 130
Query: 121 LHGRQLKVTVKRTNVPGM 138
GR LKV KRTN+PGM
Sbjct: 131 FRGRNLKVVPKRTNLPGM 148
>gi|261205936|ref|XP_002627705.1| RNP domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239592764|gb|EEQ75345.1| RNP domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239611077|gb|EEQ88064.1| RNP domain-containing protein [Ajellomyces dermatitidis ER-3]
gi|327350679|gb|EGE79536.1| RNP domain-containing protein [Ajellomyces dermatitidis ATCC 18188]
Length = 189
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 86/138 (62%), Gaps = 21/138 (15%)
Query: 13 NKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFV 72
+++ E+ MK R+ EME EA LR+M A + + S ++ ++E++D+RS+FV
Sbjct: 20 DEEEEIAAMKRRVAEMESEAAKLREMQASLDQQSESLRE---------DKEDIDARSIFV 70
Query: 73 GN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESE 120
GN HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES
Sbjct: 71 GNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQALVLNESV 130
Query: 121 LHGRQLKVTVKRTNVPGM 138
GR LKV KRTN+PGM
Sbjct: 131 FRGRNLKVVPKRTNLPGM 148
>gi|170592979|ref|XP_001901242.1| pabpn1-prov protein [Brugia malayi]
gi|158591309|gb|EDP29922.1| pabpn1-prov protein, putative [Brugia malayi]
Length = 219
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 112/197 (56%), Gaps = 36/197 (18%)
Query: 1 MEGDDM-----DMIETENKQVELDDMKI---RLKEMEEEATALRQMHAKVGNEM--ASKQ 50
+E DD+ D++ + + E DM+ R+KE+EEEA +RQM + V +M ++
Sbjct: 14 IEEDDILDNGSDLLTSTDHMSEDPDMEALTNRMKEIEEEAQLIRQMQSDVEKQMNMSTGS 73
Query: 51 DPAAGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKG 98
+ + +S+ ++ E DSRSV+VGN HF CG+VNRVTI TDKF G PKG
Sbjct: 74 NTSQSVASIEDKIEADSRSVYVGNVDYCSTAEELEAHFHGCGSVNRVTILTDKFTGHPKG 133
Query: 99 YAYVEFLQSEAVQEALHLNESELHGRQLK-----VTVKRTNVPGMK-QHRPRRPNPFMVY 152
+AY+EF EAVQ AL L+ES GRQ+K V KRTN PG+ +RP R
Sbjct: 134 FAYIEFADKEAVQTALALDESLFRGRQIKASFCSVCAKRTNRPGVSTTNRPPRA------ 187
Query: 153 QSRGA--IIPPFLYSPY 167
+ RG +I ++Y+ Y
Sbjct: 188 RGRGGARVIVKYIYAGY 204
>gi|388852116|emb|CCF54292.1| related to poly(a) binding protein II [Ustilago hordei]
Length = 205
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 83/138 (60%), Gaps = 17/138 (12%)
Query: 13 NKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFV 72
++ E++ MK R+ EME EA LR++ G + P + REEVDSRS++V
Sbjct: 46 DEDAEIEAMKQRVAEMEAEAAKLRELQQAAGEAGGAGLHP-----TEEEREEVDSRSIYV 100
Query: 73 GN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESE 120
GN QHFQSCGT+NRVTI DKF G PKGYAYVEF V A+ LNES
Sbjct: 101 GNVDYGATPEELQQHFQSCGTINRVTILCDKFTGHPKGYAYVEFADPSLVANAMVLNESL 160
Query: 121 LHGRQLKVTVKRTNVPGM 138
GR +K+T KRTN+PGM
Sbjct: 161 FRGRLIKITAKRTNMPGM 178
>gi|71013016|ref|XP_758548.1| hypothetical protein UM02401.1 [Ustilago maydis 521]
gi|46098206|gb|EAK83439.1| hypothetical protein UM02401.1 [Ustilago maydis 521]
Length = 204
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 17/144 (11%)
Query: 7 DMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVD 66
D+ ++ E++ MK R+ EME EA LR++ G + P + REEVD
Sbjct: 39 DVTAMTDEDAEIEAMKQRVAEMEAEAAKLRELQQAAGEAGGAGLHP-----TEEEREEVD 93
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL 114
SRS++VGN QHFQSCGT+NRVTI DKF G PKG+AYVEF + V A+
Sbjct: 94 SRSIYVGNVDYGATPEEVQQHFQSCGTINRVTILCDKFTGHPKGFAYVEFAEPSLVANAM 153
Query: 115 HLNESELHGRQLKVTVKRTNVPGM 138
LNES GR +KVT KRTN+PG+
Sbjct: 154 VLNESLFRGRLIKVTAKRTNMPGL 177
>gi|296425243|ref|XP_002842152.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638411|emb|CAZ86343.1| unnamed protein product [Tuber melanosporum]
Length = 190
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 85/141 (60%), Gaps = 21/141 (14%)
Query: 10 ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRS 69
E + + E+ MK R+ EME EA LR+M A + E ++ ++E++D+RS
Sbjct: 16 EGADDEEEISAMKRRVAEMEAEAAKLREMQATLDKETNELRE---------DKEDIDARS 66
Query: 70 VFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLN 117
+FVGN HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LN
Sbjct: 67 IFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQALVLN 126
Query: 118 ESELHGRQLKVTVKRTNVPGM 138
ES GR LKV KRTN+PGM
Sbjct: 127 ESVFRGRSLKVVPKRTNLPGM 147
>gi|343427618|emb|CBQ71145.1| related to poly(a) binding protein II [Sporisorium reilianum SRZ2]
Length = 208
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 83/138 (60%), Gaps = 17/138 (12%)
Query: 13 NKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFV 72
++ E++ MK R+ EME EA LR++ G + P + REEVDSRS++V
Sbjct: 48 DEDAEIEAMKQRVAEMEAEAAKLRELQQAAGEAGGAGLHP-----TEEEREEVDSRSIYV 102
Query: 73 GN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESE 120
GN QHFQSCGT+NRVTI DKF G PKG+AYVEF V A+ LNES
Sbjct: 103 GNVDYGATPEEVQQHFQSCGTINRVTILCDKFTGHPKGFAYVEFADPSLVANAMVLNESL 162
Query: 121 LHGRQLKVTVKRTNVPGM 138
GR +KVT KRTN+PGM
Sbjct: 163 FRGRLIKVTAKRTNMPGM 180
>gi|240281788|gb|EER45291.1| RNP domain-containing protein [Ajellomyces capsulatus H143]
Length = 188
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 83/134 (61%), Gaps = 21/134 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ MK R+ EME EA LR+M A + + S ++ ++E++D+RS+FVGN
Sbjct: 24 EIAAMKRRVAEMESEAAKLREMQASLDQQSESLRE---------DKEDIDARSIFVGNVD 74
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR
Sbjct: 75 YGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQALVLNESVFRGR 134
Query: 125 QLKVTVKRTNVPGM 138
LKV KRTN+PGM
Sbjct: 135 NLKVVPKRTNLPGM 148
>gi|332374616|gb|AEE62449.1| unknown [Dendroctonus ponderosae]
Length = 228
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 99/169 (58%), Gaps = 20/169 (11%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+Q+ ++V +M P S+ + EVD+RS++VG
Sbjct: 46 ELEAIKARVREMEEEAEKLKQLQSEVDKQMNLGSPPGITSPLNMSIEEKMEVDNRSIYVG 105
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N QHF CG++NRVTI ++F G PKG+AY+EF ++VQ A+ ++ES
Sbjct: 106 NVDYGATAEELEQHFHGCGSINRVTILCNRFDGHPKGFAYIEFGDRDSVQTAMAMDESLF 165
Query: 122 HGRQLKVTVKRTNVPGMK-QHRPRRPNPFMVYQSRGAIIPPFLYSPYGY 169
GRQ+KV KRTN PG+ +RP R ++ RGA F YGY
Sbjct: 166 RGRQIKVMPKRTNRPGISTTNRPPRGRGVSTFRGRGASRGGF----YGY 210
>gi|449679958|ref|XP_002163300.2| PREDICTED: polyadenylate-binding protein 2-like [Hydra
magnipapillata]
Length = 224
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 84/134 (62%), Gaps = 12/134 (8%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E++ +K R+KEMEEEA L++M + + + S Q ++ +D RSV+VGN
Sbjct: 40 EIEAIKARVKEMEEEAEKLKEMQKEAESSLMSPQHAVPSSLPGEDQASIDCRSVYVGNVD 99
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
QHF CG+VNRVTI DKF G PKG+AYVEF ++V+ A+ L++S GR
Sbjct: 100 YSATASELEQHFHGCGSVNRVTILCDKFSGHPKGFAYVEFGDKDSVENAVQLSDSLFKGR 159
Query: 125 QLKVTVKRTNVPGM 138
Q+KVT KRTNVPG+
Sbjct: 160 QIKVTAKRTNVPGI 173
>gi|254568410|ref|XP_002491315.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|238031112|emb|CAY69035.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|328352168|emb|CCA38567.1| Embryonic polyadenylate-binding protein 2 [Komagataella pastoris
CBS 7435]
Length = 209
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 92/155 (59%), Gaps = 23/155 (14%)
Query: 5 DMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS------- 57
D + E++ Q ELD K ++ EME E LR++ + E+ S+ + G +
Sbjct: 18 DSNQTESQASQQELDQWKAKMAEMEAEVNKLRELQGQ--QEVGSRPENGVGTANSDSDPK 75
Query: 58 --SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVE 103
S+ R+E+DS+S++VGN +HF++CGTVNRVTI DK G+PKG+AYVE
Sbjct: 76 FLSIEERQEIDSKSIYVGNVDFSATPGELAEHFKTCGTVNRVTILMDKVTGRPKGFAYVE 135
Query: 104 FLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
F +V E+L LN+SE HGR LKV KRTN+P
Sbjct: 136 FSDPSSVSESLVLNDSEFHGRNLKVVPKRTNMPSF 170
>gi|119184697|ref|XP_001243223.1| hypothetical protein CIMG_07119 [Coccidioides immitis RS]
gi|392866108|gb|EAS28718.2| polyadenylate-binding protein 2 [Coccidioides immitis RS]
Length = 196
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 84/134 (62%), Gaps = 21/134 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E++ MK R+ EME EA LR+M A + + + ++ ++E++D+RS+FVGN
Sbjct: 24 EIEAMKQRVAEMESEAAKLREMQASLDKQSENLRE---------DKEDIDARSIFVGNVD 74
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR
Sbjct: 75 YGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALVLNESLFRGR 134
Query: 125 QLKVTVKRTNVPGM 138
LKV KRTN+PGM
Sbjct: 135 NLKVVPKRTNLPGM 148
>gi|19112586|ref|NP_595794.1| poly(A) binding protein Pab2 [Schizosaccharomyces pombe 972h-]
gi|74675955|sp|O14327.1|PAB2_SCHPO RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName:
Full=Poly(A)-binding protein II; Short=PABII
gi|2467274|emb|CAB16904.1| poly(A) binding protein Pab2 [Schizosaccharomyces pombe]
Length = 166
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 89/146 (60%), Gaps = 23/146 (15%)
Query: 5 DMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE 64
D D ++T+ K EL +MK R+ EME EA LR M ++ NE + ++ ++E
Sbjct: 3 DQDALDTQEK--ELLEMKERVAEMEAEAAKLRAMQEQLDNETEALRN---------DKES 51
Query: 65 VDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQE 112
+D++SV+VGN HF SCG+VNRVTI DKF G PKG+AY+EF + V
Sbjct: 52 IDAQSVYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPN 111
Query: 113 ALHLNESELHGRQLKVTVKRTNVPGM 138
AL LN S LH R LKVT KRTNVPGM
Sbjct: 112 ALLLNGSMLHERPLKVTPKRTNVPGM 137
>gi|430811633|emb|CCJ30944.1| unnamed protein product [Pneumocystis jirovecii]
Length = 176
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/139 (48%), Positives = 86/139 (61%), Gaps = 21/139 (15%)
Query: 12 ENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVF 71
E ++ EL MK R+ EME EA LR++ AK+ E A L N+E++DSRSV+
Sbjct: 16 EAEEQELQAMKQRVAEMEAEAEKLREIQAKLDKENAQ---------LLENKEDIDSRSVY 66
Query: 72 VGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNES 119
VGN HFQ+CGT+NRVTI D++ G PKG+AY+EF + V +AL LNES
Sbjct: 67 VGNVDYGATPEEIQAHFQTCGTINRVTILCDRYSGHPKGFAYIEFSEPGLVPQALVLNES 126
Query: 120 ELHGRQLKVTVKRTNVPGM 138
GR LKV KRTN+PGM
Sbjct: 127 LFRGRLLKVVPKRTNLPGM 145
>gi|303320527|ref|XP_003070263.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240109949|gb|EER28118.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320041356|gb|EFW23289.1| hypothetical protein CPSG_01188 [Coccidioides posadasii str.
Silveira]
Length = 196
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 84/134 (62%), Gaps = 21/134 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E++ MK R+ EME EA LR+M A + + + ++ ++E++D+RS+FVGN
Sbjct: 24 EIEAMKRRVAEMESEAAKLREMQASLDKQSENLRE---------DKEDIDARSIFVGNVD 74
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR
Sbjct: 75 YGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALVLNESLFRGR 134
Query: 125 QLKVTVKRTNVPGM 138
LKV KRTN+PGM
Sbjct: 135 NLKVVPKRTNLPGM 148
>gi|125808904|ref|XP_001360914.1| GA15278 [Drosophila pseudoobscura pseudoobscura]
gi|109892812|sp|Q28ZX3.1|PABP2_DROPS RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|54636086|gb|EAL25489.1| GA15278 [Drosophila pseudoobscura pseudoobscura]
Length = 225
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 87/136 (63%), Gaps = 14/136 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMA--SKQDPAAGGSSLANREEVDSRSVFVGN 74
EL+ +K R+KEMEEEA ++QM ++V +MA S AA SL ++E+D+RSV+VGN
Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLAAVPLSLEEKQEIDTRSVYVGN 102
Query: 75 -----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 122
HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+
Sbjct: 103 VDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFR 162
Query: 123 GRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 163 GRQIKVMSKRTNRPGL 178
>gi|332026434|gb|EGI66562.1| Polyadenylate-binding protein 2 [Acromyrmex echinatior]
Length = 228
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 93/155 (60%), Gaps = 17/155 (10%)
Query: 7 DMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANRE 63
D+ E EL+ +K R++EMEEEA L+Q+ ++V +M P SL ++
Sbjct: 36 DLGEANVDDPELEAIKARVREMEEEAEKLKQLQSEVDKQMNMGSPPGITSPLNMSLEDKM 95
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 111
EVD+RS++VGN QHF CG+VNRVTI +KF G PKG+AY+EF + ++VQ
Sbjct: 96 EVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAERDSVQ 155
Query: 112 EALHLNESELHGRQLKVTVKRTNVPG--MKQHRPR 144
A+ ++ES GRQ+KV KRTN PG M PR
Sbjct: 156 TAMAMDESMFRGRQIKVMPKRTNKPGFSMTNRGPR 190
>gi|392568671|gb|EIW61845.1| polyadenylate-binding protein 2 [Trametes versicolor FP-101664 SS1]
Length = 192
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 90/148 (60%), Gaps = 20/148 (13%)
Query: 6 MDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE- 64
+D E ++ ++ L MK R++EME EAT LR++ A E A + P G + EE
Sbjct: 17 IDNAEEDDPEILL--MKQRVEEMEREATKLRELQAAA--EKAERSTP-TGDQPMETEEEK 71
Query: 65 --VDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAV 110
DSRS++VGN QHFQ+CGT+NRVTI DKF G PKGYAYVEF ++E V
Sbjct: 72 AATDSRSIYVGNVDYSATPEEIQQHFQACGTINRVTILCDKFTGHPKGYAYVEFSETEHV 131
Query: 111 QEALHLNESELHGRQLKVTVKRTNVPGM 138
AL ++ S GR +KVT KRTN+PG
Sbjct: 132 DAALSMDNSLFRGRLIKVTAKRTNIPGF 159
>gi|195383378|ref|XP_002050403.1| GJ22134 [Drosophila virilis]
gi|194145200|gb|EDW61596.1| GJ22134 [Drosophila virilis]
Length = 224
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 87/136 (63%), Gaps = 14/136 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMA--SKQDPAAGGSSLANREEVDSRSVFVGN 74
EL+ +K R+KEMEEEA ++QM ++V +MA S AA SL ++E+D+RSV+VGN
Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLAAVPLSLEEKQEIDTRSVYVGN 102
Query: 75 -----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 122
HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+
Sbjct: 103 VDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEYVETALAMNETLFR 162
Query: 123 GRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 163 GRQIKVMSKRTNRPGL 178
>gi|383855268|ref|XP_003703137.1| PREDICTED: polyadenylate-binding protein 2-like [Megachile
rotundata]
Length = 228
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 88/137 (64%), Gaps = 15/137 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+Q+ ++V +M P SL ++ EVD+RS++VG
Sbjct: 46 ELEAIKARVREMEEEAEKLKQLQSEVDKQMNMGSPPGITSPLNMSLEDKREVDNRSIYVG 105
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N QHF CG+VNRVTI +KF G PKG+AY+EF + ++VQ A+ ++ES
Sbjct: 106 NVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAERDSVQTAMAMDESMF 165
Query: 122 HGRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 166 RGRQIKVMPKRTNRPGL 182
>gi|258568696|ref|XP_002585092.1| polyadenylate-binding protein 2 [Uncinocarpus reesii 1704]
gi|237906538|gb|EEP80939.1| polyadenylate-binding protein 2 [Uncinocarpus reesii 1704]
Length = 194
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 84/134 (62%), Gaps = 21/134 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E++ MK R+ EME EA LR+M A + + + ++ ++E++D+RS+FVGN
Sbjct: 24 EIEAMKRRVAEMESEAAKLREMQASLDKQSENLRE---------DKEDIDARSIFVGNVD 74
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR
Sbjct: 75 YGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALVLNESVFRGR 134
Query: 125 QLKVTVKRTNVPGM 138
LKV KRTN+PGM
Sbjct: 135 NLKVVPKRTNLPGM 148
>gi|452984683|gb|EME84440.1| hypothetical protein MYCFIDRAFT_122613, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 185
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 82/130 (63%), Gaps = 21/130 (16%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN------ 74
MK R++EME EA LR+M A V + + ++ ++E++DSRS+FVGN
Sbjct: 31 MKKRVEEMEAEAAKLREMQASVDAQTDNLRE---------SKEDIDSRSIFVGNVDYGAS 81
Query: 75 -----QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR +KV
Sbjct: 82 PEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPNLVTQALVLNESVFRGRNIKV 141
Query: 129 TVKRTNVPGM 138
KRTN+PGM
Sbjct: 142 VPKRTNLPGM 151
>gi|66512323|ref|XP_393066.2| PREDICTED: polyadenylate-binding protein 2 [Apis mellifera]
Length = 228
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 88/137 (64%), Gaps = 15/137 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+Q+ ++V +M P SL ++ EVD+RS++VG
Sbjct: 46 ELEAIKARVREMEEEAEKLKQLQSEVDKQMNMGSPPGITSPLNMSLEDKMEVDNRSIYVG 105
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N QHF CG+VNRVTI +KF G PKG+AY+EF + ++VQ A+ ++ES
Sbjct: 106 NVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAERDSVQTAMAMDESMF 165
Query: 122 HGRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 166 RGRQIKVMPKRTNRPGL 182
>gi|380018099|ref|XP_003692973.1| PREDICTED: polyadenylate-binding protein 2-like [Apis florea]
Length = 228
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 88/137 (64%), Gaps = 15/137 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+Q+ ++V +M P SL ++ EVD+RS++VG
Sbjct: 46 ELEAIKARVREMEEEAEKLKQLQSEVDKQMNMGSPPGITSPLNMSLEDKMEVDNRSIYVG 105
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N QHF CG+VNRVTI +KF G PKG+AY+EF + ++VQ A+ ++ES
Sbjct: 106 NVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAERDSVQTAMAMDESMF 165
Query: 122 HGRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 166 RGRQIKVMPKRTNRPGL 182
>gi|8918490|dbj|BAA97656.1| RNA-binding protein [Candida boidinii]
Length = 255
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 87/134 (64%), Gaps = 18/134 (13%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
EL +K +++EM++EA ALR+M ++GN LA R+++D+RSV++GN
Sbjct: 79 ELAILKAKMEEMKQEANALREMQEQMGNNGTHPH------LDLAARQDIDNRSVYIGNLD 132
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
+HF+SCG++NR+TI T+KF G PKG+AY+EF + V +AL LN+S GR
Sbjct: 133 YAATPDELQKHFESCGSINRITIPTNKFTGNPKGFAYIEFSDASYVPQALSLNDSLFKGR 192
Query: 125 QLKVTVKRTNVPGM 138
LK++ KRTNVPG
Sbjct: 193 NLKISAKRTNVPGF 206
>gi|307171015|gb|EFN63078.1| Polyadenylate-binding protein 2 [Camponotus floridanus]
Length = 228
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 90/145 (62%), Gaps = 17/145 (11%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+Q+ ++V +M P SL ++ EVD+RS++VG
Sbjct: 46 ELEAIKARVREMEEEAEKLKQLQSEVDKQMNMGSPPGITSPLNMSLEDKMEVDNRSIYVG 105
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N QHF CG+VNRVTI +KF G PKG+AY+EF + ++VQ A+ ++ES
Sbjct: 106 NVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAERDSVQTAMAMDESMF 165
Query: 122 HGRQLKVTVKRTNVPG--MKQHRPR 144
GRQ+KV KRTN PG M PR
Sbjct: 166 RGRQIKVMPKRTNKPGFSMTNRGPR 190
>gi|307196969|gb|EFN78344.1| Polyadenylate-binding protein 2 [Harpegnathos saltator]
Length = 228
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 90/145 (62%), Gaps = 17/145 (11%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+Q+ ++V +M P SL ++ EVD+RS++VG
Sbjct: 46 ELEAIKARVREMEEEAEKLKQLQSEVDKQMNMGSPPGITSPLNMSLEDKMEVDNRSIYVG 105
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N QHF CG+VNRVTI +KF G PKG+AY+EF + ++VQ A+ ++ES
Sbjct: 106 NVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAERDSVQTAMAMDESMF 165
Query: 122 HGRQLKVTVKRTNVPG--MKQHRPR 144
GRQ+KV KRTN PG M PR
Sbjct: 166 RGRQIKVMPKRTNKPGFSMTNRGPR 190
>gi|340716338|ref|XP_003396656.1| PREDICTED: polyadenylate-binding protein 2-like [Bombus terrestris]
gi|350406230|ref|XP_003487700.1| PREDICTED: polyadenylate-binding protein 2-like [Bombus impatiens]
Length = 228
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 88/137 (64%), Gaps = 15/137 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+Q+ ++V +M P SL ++ EVD+RS++VG
Sbjct: 46 ELEAIKARVREMEEEAEKLKQLQSEVDKQMNMGSPPGITSPLNMSLEDKMEVDNRSIYVG 105
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N QHF CG++NRVTI +KF G PKG+AY+EF + ++VQ A+ ++ES
Sbjct: 106 NVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKGFAYIEFAERDSVQTAMAIDESMF 165
Query: 122 HGRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 166 RGRQIKVMPKRTNRPGL 182
>gi|289741433|gb|ADD19464.1| splicing factor RNPS1 [Glossina morsitans morsitans]
Length = 223
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 93/156 (59%), Gaps = 16/156 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMA-SKQDPAAGGSSLANREEVDSRSVFVGN- 74
EL+ +K R+KEMEEEA ++QM ++V +MA S A SL ++E+D+RSV+VGN
Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGSTTGLATVPLSLEEKQEIDTRSVYVGNV 102
Query: 75 ----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHG 123
HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+ G
Sbjct: 103 DYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRG 162
Query: 124 RQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAII 159
RQ+KV KRTN PG+ P ++ RGA I
Sbjct: 163 RQIKVMSKRTNRPGLS---TTNRFPRGTFRGRGARI 195
>gi|452822710|gb|EME29727.1| RNA-binding protein [Galdieria sulphuraria]
Length = 198
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 81/135 (60%), Gaps = 25/135 (18%)
Query: 16 VELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN- 74
EL+ MK RL+EMEEEA L+++ + +E+ S EEVD RSV+VGN
Sbjct: 33 AELEAMKKRLQEMEEEANRLKEVQEQSASEVPSS-------------EEVDRRSVYVGNV 79
Query: 75 ----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHG 123
HF+ CGT+NRVTI DKF G PKG+AY+EF E A+ LNES G
Sbjct: 80 DYGSTPEELQAHFKECGTINRVTILCDKFTGHPKGFAYIEFATEEGANNAVILNESLFRG 139
Query: 124 RQLKVTVKRTNVPGM 138
R LKV++KRTNVPG+
Sbjct: 140 RNLKVSIKRTNVPGI 154
>gi|195153805|ref|XP_002017814.1| GL17107 [Drosophila persimilis]
gi|194113610|gb|EDW35653.1| GL17107 [Drosophila persimilis]
Length = 225
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 87/136 (63%), Gaps = 14/136 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMA--SKQDPAAGGSSLANREEVDSRSVFVGN 74
EL+ +K R+KEMEEEA ++QM ++V +MA S AA SL ++E+D+RSV+VGN
Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLAAVPLSLEEKQEIDTRSVYVGN 102
Query: 75 -----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 122
HF CGT+NRVTI +K G PKG+A++EF E V+ AL +NE+
Sbjct: 103 VDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAFIEFGSKEFVETALAMNETLFR 162
Query: 123 GRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 163 GRQIKVMSKRTNRPGL 178
>gi|195332369|ref|XP_002032871.1| GM21011 [Drosophila sechellia]
gi|195581470|ref|XP_002080557.1| GD10545 [Drosophila simulans]
gi|194124841|gb|EDW46884.1| GM21011 [Drosophila sechellia]
gi|194192566|gb|EDX06142.1| GD10545 [Drosophila simulans]
Length = 229
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 86/136 (63%), Gaps = 14/136 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMA--SKQDPAAGGSSLANREEVDSRSVFVGN 74
EL+ +K R+KEMEEEA ++QM ++V +MA S A SL ++E+D+RSV+VGN
Sbjct: 47 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGN 106
Query: 75 -----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 122
HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+
Sbjct: 107 VDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFR 166
Query: 123 GRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 167 GRQIKVMSKRTNRPGL 182
>gi|194757557|ref|XP_001961031.1| GF13666 [Drosophila ananassae]
gi|190622329|gb|EDV37853.1| GF13666 [Drosophila ananassae]
Length = 224
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 94/160 (58%), Gaps = 21/160 (13%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMA--SKQDPAAGGSSLANREEVDSRSVFVGN 74
EL+ +K R+KEMEEEA ++QM ++V +MA S A SL ++E+D+RSV+VGN
Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGN 102
Query: 75 -----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 122
HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+
Sbjct: 103 VDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFR 162
Query: 123 GRQLKVTVKRTNVPGMKQHRPRRPNPFM--VYQSRGAIIP 160
GRQ+KV KRTN PG+ N F ++ RGA +
Sbjct: 163 GRQIKVMSKRTNRPGLST-----TNRFARGTFRGRGARVS 197
>gi|195474616|ref|XP_002089587.1| Pabp2 [Drosophila yakuba]
gi|194175688|gb|EDW89299.1| Pabp2 [Drosophila yakuba]
Length = 225
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 86/136 (63%), Gaps = 14/136 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMA--SKQDPAAGGSSLANREEVDSRSVFVGN 74
EL+ +K R+KEMEEEA ++QM ++V +MA S A SL ++E+D+RSV+VGN
Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGN 102
Query: 75 -----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 122
HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+
Sbjct: 103 VDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFR 162
Query: 123 GRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 163 GRQIKVMSKRTNRPGL 178
>gi|17136784|ref|NP_476902.1| Pabp2, isoform A [Drosophila melanogaster]
gi|24586513|ref|NP_724648.1| Pabp2, isoform B [Drosophila melanogaster]
gi|75009760|sp|Q7KNF2.1|PABP2_DROME RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; Short=dPABP2; AltName:
Full=Nuclear poly(A)-binding protein 1; AltName:
Full=Poly(A)-binding protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1; AltName:
Full=Protein rox2
gi|6007612|gb|AAF00976.1|AF116341_1 poly(A)-binding protein II [Drosophila melanogaster]
gi|7304089|gb|AAF59127.1| Pabp2, isoform A [Drosophila melanogaster]
gi|17944423|gb|AAL48102.1| RE74211p [Drosophila melanogaster]
gi|18447531|gb|AAL68327.1| RE69521p [Drosophila melanogaster]
gi|21627704|gb|AAM68852.1| Pabp2, isoform B [Drosophila melanogaster]
gi|220949012|gb|ACL87049.1| Pabp2-PA [synthetic construct]
gi|220958188|gb|ACL91637.1| Pabp2-PA [synthetic construct]
Length = 224
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 86/136 (63%), Gaps = 14/136 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMA--SKQDPAAGGSSLANREEVDSRSVFVGN 74
EL+ +K R+KEMEEEA ++QM ++V +MA S A SL ++E+D+RSV+VGN
Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGN 102
Query: 75 -----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 122
HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+
Sbjct: 103 VDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFR 162
Query: 123 GRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 163 GRQIKVMSKRTNRPGL 178
>gi|195455316|ref|XP_002074665.1| GK23192 [Drosophila willistoni]
gi|194170750|gb|EDW85651.1| GK23192 [Drosophila willistoni]
Length = 225
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 86/136 (63%), Gaps = 14/136 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMA--SKQDPAAGGSSLANREEVDSRSVFVGN 74
EL+ +K R+KEMEEEA ++QM ++V +MA S A SL ++E+D+RSV+VGN
Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGN 102
Query: 75 -----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 122
HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+
Sbjct: 103 VDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEYVETALAMNETLFR 162
Query: 123 GRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 163 GRQIKVMSKRTNRPGL 178
>gi|164430255|gb|ABY55455.1| Pabp2 [Drosophila mauritiana]
gi|164430257|gb|ABY55456.1| Pabp2 [Drosophila mauritiana]
gi|164430259|gb|ABY55457.1| Pabp2 [Drosophila mauritiana]
gi|164430261|gb|ABY55458.1| Pabp2 [Drosophila mauritiana]
gi|164430263|gb|ABY55459.1| Pabp2 [Drosophila mauritiana]
gi|188504221|gb|ACD56226.1| PABP2 [Drosophila simulans]
gi|188504223|gb|ACD56227.1| PABP2 [Drosophila simulans]
gi|188504225|gb|ACD56228.1| PABP2 [Drosophila simulans]
gi|188504227|gb|ACD56229.1| PABP2 [Drosophila simulans]
gi|188504229|gb|ACD56230.1| PABP2 [Drosophila sechellia]
Length = 228
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 86/136 (63%), Gaps = 14/136 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMA--SKQDPAAGGSSLANREEVDSRSVFVGN 74
EL+ +K R+KEMEEEA ++QM ++V +MA S A SL ++E+D+RSV+VGN
Sbjct: 47 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGN 106
Query: 75 -----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 122
HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+
Sbjct: 107 VDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFR 166
Query: 123 GRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 167 GRQIKVMSKRTNRPGL 182
>gi|195029099|ref|XP_001987412.1| GH21908 [Drosophila grimshawi]
gi|193903412|gb|EDW02279.1| GH21908 [Drosophila grimshawi]
Length = 224
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 86/136 (63%), Gaps = 14/136 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMA--SKQDPAAGGSSLANREEVDSRSVFVGN 74
EL+ +K R+KEMEEEA ++QM ++V +MA S A SL ++E+D+RSV+VGN
Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGN 102
Query: 75 -----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 122
HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+
Sbjct: 103 VDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEYVETALAMNETLFR 162
Query: 123 GRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 163 GRQIKVMSKRTNRPGL 178
>gi|321477676|gb|EFX88634.1| hypothetical protein DAPPUDRAFT_206317 [Daphnia pulex]
Length = 222
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 89/135 (65%), Gaps = 13/135 (9%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAG-GSSLANREEVDSRSVFVGN- 74
EL+ +K R++EMEEEA L+ + ++V ++ S A+ S+ + EVD+RSVFVGN
Sbjct: 45 ELEAIKARVREMEEEAEKLKMLQSEVEKQINSPTGVASSPNMSVEEKMEVDARSVFVGNV 104
Query: 75 ----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHG 123
QHF CG++NRVTI +K+ GQPKG+AY+EF ++VQ A+ L+ES G
Sbjct: 105 DYGATAEELEQHFHGCGSINRVTILCNKWDGQPKGFAYIEFGDKDSVQTAMALDESLFRG 164
Query: 124 RQLKVTVKRTNVPGM 138
RQ+KV +KRTN PG+
Sbjct: 165 RQIKVMLKRTNRPGI 179
>gi|194863574|ref|XP_001970507.1| GG23338 [Drosophila erecta]
gi|190662374|gb|EDV59566.1| GG23338 [Drosophila erecta]
Length = 224
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 86/136 (63%), Gaps = 14/136 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMA--SKQDPAAGGSSLANREEVDSRSVFVGN 74
EL+ +K R+KEMEEEA ++QM ++V +MA S A SL ++E+D+RSV+VGN
Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGN 102
Query: 75 -----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 122
HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+
Sbjct: 103 VDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFR 162
Query: 123 GRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 163 GRQIKVMSKRTNRPGL 178
>gi|195121132|ref|XP_002005075.1| GI19259 [Drosophila mojavensis]
gi|193910143|gb|EDW09010.1| GI19259 [Drosophila mojavensis]
Length = 224
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 86/136 (63%), Gaps = 14/136 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMA--SKQDPAAGGSSLANREEVDSRSVFVGN 74
EL+ +K R+KEMEEEA ++QM ++V +MA S A SL ++E+D+RSV+VGN
Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGN 102
Query: 75 -----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 122
HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+
Sbjct: 103 VDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEYVETALAMNETLFR 162
Query: 123 GRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 163 GRQIKVMSKRTNRPGL 178
>gi|357612937|gb|EHJ68241.1| polyadenylate binding protein 2 [Danaus plexippus]
Length = 217
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 88/143 (61%), Gaps = 16/143 (11%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
+L +K R++EMEEEA L+QMH +V +M+ P SL + E D+RSV++G
Sbjct: 42 DLAAIKARVREMEEEAEKLKQMHTEVDKQMSLGSPPGLTSPLNMSLEEKIETDNRSVYIG 101
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N QHF CG++NRVTI +KF G PKG+AY+EF ++VQ A+ ++ES
Sbjct: 102 NVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKGFAYIEFGDKDSVQTAMAMDESLF 161
Query: 122 HGRQLKVTVKRTNVPGMK-QHRP 143
GRQ+KV KRTN PG+ +RP
Sbjct: 162 RGRQIKVMPKRTNKPGLSTTNRP 184
>gi|171677925|ref|XP_001903913.1| hypothetical protein [Podospora anserina S mat+]
gi|170937031|emb|CAP61689.1| unnamed protein product [Podospora anserina S mat+]
Length = 209
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 79/130 (60%), Gaps = 21/130 (16%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN------ 74
MK R+ EME EA LR+M A + E QD ++E++D+RSVFVGN
Sbjct: 34 MKRRVAEMEAEAAKLREMQASMDQERQGLQD---------DKEDIDNRSVFVGNVDYSAS 84
Query: 75 -----QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
HF CG++NRVTI DKF GQPKGYAYVEF + V +AL LN+S GR +KV
Sbjct: 85 PEELQSHFGDCGSINRVTILLDKFTGQPKGYAYVEFSEPNMVAQALVLNDSLFKGRNIKV 144
Query: 129 TVKRTNVPGM 138
KRTN+PGM
Sbjct: 145 EPKRTNLPGM 154
>gi|398389564|ref|XP_003848243.1| hypothetical protein MYCGRDRAFT_77177 [Zymoseptoria tritici IPO323]
gi|339468117|gb|EGP83219.1| hypothetical protein MYCGRDRAFT_77177 [Zymoseptoria tritici IPO323]
Length = 199
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 82/130 (63%), Gaps = 21/130 (16%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN------ 74
MK R++EME EA LR++ A + ++ + ++ N+E++D+RSVFVGN
Sbjct: 36 MKKRVEEMEAEAAKLRELQANIDSQADNLRE---------NKEDIDARSVFVGNVDYGAS 86
Query: 75 -----QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
HFQSCG++NRVTI DKF G PKGYAYVEF + V AL LN+S GR +KV
Sbjct: 87 PEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPNLVTPALVLNDSTFRGRAIKV 146
Query: 129 TVKRTNVPGM 138
KRTN+PGM
Sbjct: 147 VPKRTNLPGM 156
>gi|291232664|ref|XP_002736265.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Saccoglossus
kowalevskii]
Length = 231
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 84/134 (62%), Gaps = 12/134 (8%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
EL+ +K R++EMEEEA L++M +V +M SL ++ EVD+RSV+VGN
Sbjct: 50 ELEAIKARVREMEEEAEKLKEMQNEVEKQMNMTSPTQMTPISLEDKVEVDARSVYVGNVD 109
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HF CG+VNRVTI DKF G PKG+AY+E+ ++VQ +L L+ES GR
Sbjct: 110 YSATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEYADKDSVQTSLALDESLFKGR 169
Query: 125 QLKVTVKRTNVPGM 138
Q+KV KRTN PG+
Sbjct: 170 QIKVLPKRTNRPGI 183
>gi|384494630|gb|EIE85121.1| hypothetical protein RO3G_09831 [Rhizopus delemar RA 99-880]
Length = 203
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 79/132 (59%), Gaps = 22/132 (16%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
EL+ MK R+K+ME EA LR M A+V M ++D +E VDSRSV+VGN
Sbjct: 38 ELEAMKQRVKDMENEAAKLRDMQAEVEKSMHPEED----------KEAVDSRSVYVGNVD 87
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCGT+NRVTI DKF G PKGYAYVEF + V A+ L+ S R
Sbjct: 88 YGASPEELQAHFQSCGTINRVTILCDKFTGHPKGYAYVEFAEPSFVNAAVSLDNSLFRAR 147
Query: 125 QLKVTVKRTNVP 136
LKV+ KRTNVP
Sbjct: 148 LLKVSPKRTNVP 159
>gi|270010566|gb|EFA07014.1| hypothetical protein TcasGA2_TC009984 [Tribolium castaneum]
Length = 225
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 94/158 (59%), Gaps = 16/158 (10%)
Query: 4 DDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLA 60
+D D+ T EL+ +K R++EMEEEA L+Q+ ++V +M P SL
Sbjct: 31 NDTDLDGTGGDDPELEAIKARVREMEEEAEKLKQLQSEVDKQMNMGSPPGLTSPLNMSLE 90
Query: 61 NREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSE 108
+ EVD+RS++VGN QHF CG++NRVTI +K+ G PKG+AY+EF +
Sbjct: 91 EKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDRD 150
Query: 109 AVQEALHLNESELHGRQLKVTVKRTNVPGMK-QHRPRR 145
+VQ A+ ++ES GR +KV KRTN PG+ +RP R
Sbjct: 151 SVQTAMAMDESLFRGRPIKVMPKRTNRPGLSTTNRPPR 188
>gi|392592926|gb|EIW82252.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 197
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 90/146 (61%), Gaps = 23/146 (15%)
Query: 10 ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS-----SLANREE 64
E E+K+++L MK R++EME EA LR++ A + S + GGS +L +++
Sbjct: 26 EAESKEIQL--MKQRVEEMEREAKKLRELQAAAETDDQSGE----GGSGEAMDTLEDKQA 79
Query: 65 VDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQE 112
DSRSV+VGN HFQ+CGT+NRVTI DKF G PKG+AYVEF + + +
Sbjct: 80 ADSRSVYVGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGFAYVEFAEPDFIDA 139
Query: 113 ALHLNESELHGRQLKVTVKRTNVPGM 138
AL ++ S GR +KVT KRTN+PG
Sbjct: 140 ALAMDNSLFRGRLIKVTAKRTNIPGF 165
>gi|169604234|ref|XP_001795538.1| hypothetical protein SNOG_05129 [Phaeosphaeria nodorum SN15]
gi|111066400|gb|EAT87520.1| hypothetical protein SNOG_05129 [Phaeosphaeria nodorum SN15]
Length = 214
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 88/149 (59%), Gaps = 21/149 (14%)
Query: 2 EGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLAN 61
E + +D E N++ E+ M+ R++EMEEEA LR+M + E ++ +
Sbjct: 12 EDERLDTAEDPNEEEEISAMRRRVQEMEEEAAKLREMQQSLDTERHEMRE---------S 62
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 109
+E+VD+RSVFVGN HFQS G++NRVTI DKF G PKGYAYVEF +
Sbjct: 63 KEDVDARSVFVGNVDYGASPEEIQAHFQSIGSINRVTILLDKFTGHPKGYAYVEFTEPSL 122
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGM 138
V EAL L+ S R LKV KRTN+PGM
Sbjct: 123 VNEALVLDNSVFRSRNLKVVPKRTNLPGM 151
>gi|389614949|dbj|BAM20476.1| glycine rich RNA binding protein, putative [Papilio polytes]
Length = 218
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 94/159 (59%), Gaps = 20/159 (12%)
Query: 3 GDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SL 59
GDD+ ++ +L +K R++EMEEEA L+QM +V +M+ P S+
Sbjct: 33 GDDVSGVDVP----DLAAIKARVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSI 88
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQS 107
+ E D+RSV+VGN QHF CG++NRVTI +KF G PKG+AY+EF
Sbjct: 89 EEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKGFAYIEFGDK 148
Query: 108 EAVQEALHLNESELHGRQLKVTVKRTNVPGMKQ-HRPRR 145
++VQ A+ ++ES GRQ+KV KRTN PG+ +RP R
Sbjct: 149 DSVQTAMAMDESLFRGRQIKVMPKRTNKPGLSSTNRPPR 187
>gi|449301196|gb|EMC97207.1| hypothetical protein BAUCODRAFT_68306 [Baudoinia compniacensis UAMH
10762]
Length = 223
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 81/130 (62%), Gaps = 21/130 (16%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN------ 74
MK R++EME EA LR+M A + + ++ ++E++D RSVFVGN
Sbjct: 35 MKKRVQEMEAEAAKLREMQASIDAQTEGLRE---------SKEDIDGRSVFVGNVDYGAS 85
Query: 75 -----QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
HFQ+CG++NRVTI DKF G PKGYAYVEF + V +AL LN+S+ GR +KV
Sbjct: 86 PEEIQAHFQTCGSINRVTILLDKFTGHPKGYAYVEFSEPNLVTQALVLNDSQFRGRAIKV 145
Query: 129 TVKRTNVPGM 138
KRTN+PGM
Sbjct: 146 VPKRTNLPGM 155
>gi|606751|gb|AAA73522.1| RNA binding protein [Drosophila melanogaster]
Length = 224
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 85/136 (62%), Gaps = 14/136 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEM--ASKQDPAAGGSSLANREEVDSRSVFVGN 74
EL+ +K R+KEMEEEA ++QM ++V +M S A SL ++E+D+RSV+VGN
Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMRGGSTTGLATVPLSLEEKQEIDTRSVYVGN 102
Query: 75 -----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 122
HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+
Sbjct: 103 VDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFR 162
Query: 123 GRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 163 GRQIKVMSKRTNRPGL 178
>gi|367030447|ref|XP_003664507.1| hypothetical protein MYCTH_2307416 [Myceliophthora thermophila ATCC
42464]
gi|347011777|gb|AEO59262.1| hypothetical protein MYCTH_2307416 [Myceliophthora thermophila ATCC
42464]
Length = 186
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 81/127 (63%), Gaps = 21/127 (16%)
Query: 24 RLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN--------- 74
R+ EME EA LR+M A + ++QD ++E+VD+RS+FVGN
Sbjct: 26 RVAEMEAEAAKLREMQASLDQ---ARQDLTE------DKEDVDNRSIFVGNVDYSTSPEE 76
Query: 75 --QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVK 131
HFQSCG++NRVTI DKF GQPKGYAYVEF + + V +AL LN+S GR +KV K
Sbjct: 77 LQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFSEPQLVAQALVLNDSVFKGRNIKVEPK 136
Query: 132 RTNVPGM 138
RTN+PGM
Sbjct: 137 RTNIPGM 143
>gi|189239479|ref|XP_975440.2| PREDICTED: similar to polyadenylate binding protein 2 [Tribolium
castaneum]
Length = 222
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 94/158 (59%), Gaps = 16/158 (10%)
Query: 4 DDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLA 60
+D D+ T EL+ +K R++EMEEEA L+Q+ ++V +M P SL
Sbjct: 31 NDTDLDGTGGDDPELEAIKARVREMEEEAEKLKQLQSEVDKQMNMGSPPGLTSPLNMSLE 90
Query: 61 NREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSE 108
+ EVD+RS++VGN QHF CG++NRVTI +K+ G PKG+AY+EF +
Sbjct: 91 EKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDRD 150
Query: 109 AVQEALHLNESELHGRQLKVTVKRTNVPGMK-QHRPRR 145
+VQ A+ ++ES GR +KV KRTN PG+ +RP R
Sbjct: 151 SVQTAMAMDESLFRGRPIKVMPKRTNRPGLSTTNRPPR 188
>gi|390601291|gb|EIN10685.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 194
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 82/137 (59%), Gaps = 18/137 (13%)
Query: 12 ENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVF 71
EN Q E+ MK R+KEMEEEA LR++ E A K+ +G + + DSRSV+
Sbjct: 19 ENPQ-EIQMMKQRVKEMEEEAAKLRELQ-----EQAEKEQSQSGPMDVDDPTAADSRSVY 72
Query: 72 VGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNES 119
VGN HFQ+CG +NRVTI DKF G PKGYAYVEF + E V A+ L+ S
Sbjct: 73 VGNVDYGATPEEIQAHFQACGVINRVTILCDKFTGHPKGYAYVEFSEPEHVDAAVALDNS 132
Query: 120 ELHGRQLKVTVKRTNVP 136
GR LKVT KRTN+P
Sbjct: 133 LFRGRLLKVTAKRTNIP 149
>gi|403416120|emb|CCM02820.1| predicted protein [Fibroporia radiculosa]
Length = 255
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 85/142 (59%), Gaps = 15/142 (10%)
Query: 12 ENKQVELDDMKIRLKEMEEEATALRQMHA---KVGNEMASKQDPAAGGSSLANREEVDSR 68
E+ E+ MK R++EME+EA LR+M A K N A+ D + + ++ DSR
Sbjct: 23 EDDTKEILAMKQRVEEMEKEANKLREMQAEAEKAENGSATDGDTSVPMETEDDKAAADSR 82
Query: 69 SVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHL 116
S+FVGN HFQ+CG +NRVTI DKF G PKG+AYVEF ++E V AL +
Sbjct: 83 SIFVGNVDYAATPEEIQMHFQACGVINRVTILCDKFTGHPKGFAYVEFGEAEHVDAALAM 142
Query: 117 NESELHGRQLKVTVKRTNVPGM 138
+ S GR +KVT KRTN+PG
Sbjct: 143 DNSLFRGRLIKVTAKRTNIPGF 164
>gi|389609797|dbj|BAM18510.1| glycine rich RNA binding protein, putative [Papilio xuthus]
Length = 218
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 88/145 (60%), Gaps = 16/145 (11%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
+L +K R++EMEEEA L+QM +V +M+ P S+ + E D+RSV+VG
Sbjct: 43 DLAAIKARVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVG 102
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N QHF CG++NRVTI +KF G PKG+AY+EF ++VQ A+ ++ES
Sbjct: 103 NVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKGFAYIEFGDKDSVQTAMAMDESLF 162
Query: 122 HGRQLKVTVKRTNVPGMKQ-HRPRR 145
GRQ+KV KRTN PG+ +RP R
Sbjct: 163 RGRQIKVMPKRTNKPGLSSTNRPPR 187
>gi|440800318|gb|ELR21357.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 195
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 84/132 (63%), Gaps = 19/132 (14%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
+ D+K ++++M+EEA L ++ +V +M + PA N + +D+RSV+VGN
Sbjct: 35 DFSDLKRQVQQMQEEAEKLEEIQKEVEAQMGTSPSPA-------NSQSIDARSVYVGNVD 87
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG +NR+TI DKF G PKGYAY+EF + +AV A+ LN++ +HGR
Sbjct: 88 YAVTPQELQAHFQSCGPINRITILCDKFTGHPKGYAYIEFSEEDAVGNAVLLNDTVVHGR 147
Query: 125 QLKVTVKRTNVP 136
Q+KV KRTNVP
Sbjct: 148 QIKVNPKRTNVP 159
>gi|146413939|ref|XP_001482940.1| hypothetical protein PGUG_04895 [Meyerozyma guilliermondii ATCC
6260]
gi|146392639|gb|EDK40797.1| hypothetical protein PGUG_04895 [Meyerozyma guilliermondii ATCC
6260]
Length = 220
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 88/141 (62%), Gaps = 21/141 (14%)
Query: 11 TENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSV 70
T KQ+E + +K R++EME EA LR++HA++ + GG + R ++DSRS+
Sbjct: 50 TSEKQMEAEMIKQRMEEMEREAAKLRELHAQLSED--------KGGDTEEERRDIDSRSI 101
Query: 71 FVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNE 118
++GN QHF S G VNRVTI T+K GQPKG+AY+EF + V +A+ +
Sbjct: 102 YIGNVDYGATPLELQQHFSSSGVVNRVTILTNKHTGQPKGFAYLEFADVDGVNKAVATQD 161
Query: 119 -SELHGRQLKVTVKRTNVPGM 138
S HGR+LKV+ KRTN+PG+
Sbjct: 162 GSSFHGRELKVSAKRTNIPGV 182
>gi|405978177|gb|EKC42587.1| Polyadenylate-binding protein 2 [Crassostrea gigas]
Length = 244
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 91/151 (60%), Gaps = 13/151 (8%)
Query: 1 MEGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEM-ASKQDPAAGGSSL 59
+EGD+ ++ EL+ +K R++EMEEEA L++M +V +M + A+ S
Sbjct: 33 VEGDNGVADDSTADDPELEAIKARVREMEEEAEKLKEMQKEVDTQMNLTSPTTASPFPSA 92
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQS 107
+ + D+RSV+VGN QHF CG+VNRVTI DKF G PKG+AYVEF
Sbjct: 93 EEKMDADARSVYVGNVDYGATAEELEQHFHGCGSVNRVTILCDKFTGHPKGFAYVEFADK 152
Query: 108 EAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
++V A L+ES GRQ+KV+ KRTN PG+
Sbjct: 153 DSVTTAQALDESLFRGRQIKVSAKRTNRPGI 183
>gi|339253200|ref|XP_003371823.1| polyadenylate-binding protein 2 [Trichinella spiralis]
gi|316967866|gb|EFV52232.1| polyadenylate-binding protein 2 [Trichinella spiralis]
Length = 208
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 96/163 (58%), Gaps = 23/163 (14%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEV--DSRSVFVGN 74
E+++++ RLKEME+EA +R +H +V +M++ + + L + E+V DSRSVFVGN
Sbjct: 11 EIEEIRARLKEMEKEAQLIRNLHTEVEKQMSTVLNESPTPPPLTSDEKVEADSRSVFVGN 70
Query: 75 -----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 122
HF CG +NR+TI D++ G+PKG+AY+EF E+ + +L + ++
Sbjct: 71 VDYGAAAEELEAHFHGCGAINRITILCDRYSGRPKGFAYIEFADKESARASLAMTDTLFR 130
Query: 123 GRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYS 165
GRQ+KV KRTN PGM +R R RG + +LYS
Sbjct: 131 GRQIKVVEKRTNRPGMGFNRRR---------MRGRVAYRYLYS 164
>gi|210076154|ref|XP_504024.2| YALI0E16500p [Yarrowia lipolytica]
gi|199426927|emb|CAG79617.2| YALI0E16500p [Yarrowia lipolytica CLIB122]
Length = 184
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 84/137 (61%), Gaps = 23/137 (16%)
Query: 16 VELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA-NREEVDSRSVFVGN 74
E++ M+ RL++++EEA+ L M QD L ++EE+D+RS++VGN
Sbjct: 25 AEMEAMQARLQQLQEEASKLESMQ----------QDATKSSEDLKEDQEEIDARSIYVGN 74
Query: 75 -----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 122
+HF+ CG+V RVTI DKF G PKGYAY+EF + + V +A+ LN+SE
Sbjct: 75 VDYGATPQELEKHFEKCGSVQRVTILMDKFTGNPKGYAYIEFAEPKDVAQAVTLNDSEFR 134
Query: 123 GRQLKVTVKRTNVPGMK 139
RQLKV+ KRTN+PG K
Sbjct: 135 QRQLKVSAKRTNIPGFK 151
>gi|326469996|gb|EGD94005.1| hypothetical protein TESG_01534 [Trichophyton tonsurans CBS 112818]
Length = 186
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 82/134 (61%), Gaps = 21/134 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ M+ RL +ME EA L +M A + + + ++ ++E++D+RS+FVGN
Sbjct: 25 EIAAMRERLTKMESEAAKLHEMQASLDQQTENLRE---------DKEDIDARSIFVGNVD 75
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR
Sbjct: 76 YAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALVLNESLFRGR 135
Query: 125 QLKVTVKRTNVPGM 138
+KV KRTN+PGM
Sbjct: 136 NIKVVPKRTNLPGM 149
>gi|242004476|ref|XP_002423109.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
gi|212506055|gb|EEB10371.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
Length = 221
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 85/138 (61%), Gaps = 15/138 (10%)
Query: 16 VELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFV 72
EL+ +K R++EMEEEA L+Q+ +V ++ S SL + EVD+RS++V
Sbjct: 40 TELEAIKARVREMEEEAEKLKQLQTEVEKQLNLGSPTGLTSSLNLSLEEKLEVDNRSIYV 99
Query: 73 GN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESE 120
GN QHF CG++NRVTI +K+ G PKG+AY+EF ++VQ A+ ++ES
Sbjct: 100 GNVDYGANAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFADKDSVQTAMAMDESL 159
Query: 121 LHGRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PGM
Sbjct: 160 FRGRQIKVNPKRTNKPGM 177
>gi|409050235|gb|EKM59712.1| hypothetical protein PHACADRAFT_250387 [Phanerochaete carnosa
HHB-10118-sp]
Length = 203
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 91/152 (59%), Gaps = 28/152 (18%)
Query: 7 DMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLAN----- 61
D+ E E+K++ L MK R++EME EA LR++ A A++ GG+S A+
Sbjct: 21 DVEEEESKEILL--MKQRVEEMEREANKLRELQA------AAENQEHEGGASDASVPMET 72
Query: 62 ---REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQ 106
R + D RS+F+GN QHFQ+CGT+NRVTI DKF G PKG+AYVEF +
Sbjct: 73 EDERAQADQRSIFIGNVDYASTPEEIQQHFQACGTINRVTILCDKFTGHPKGFAYVEFAE 132
Query: 107 SEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
E++ AL ++ S GR +KVT KRTN+ G
Sbjct: 133 PESIDTALAMDNSLFRGRLIKVTSKRTNIHGF 164
>gi|112983360|ref|NP_001037644.1| polyadenylate binding protein 2 [Bombyx mori]
gi|109706831|gb|ABG43002.1| polyadenylate binding protein 2 [Bombyx mori]
Length = 218
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 87/143 (60%), Gaps = 16/143 (11%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
+L +K R++EMEEEA L+QM +V +M+ P S+ + E D+RSV+VG
Sbjct: 43 DLAAIKARVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVG 102
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N QHF CG++NRVTI +K+ G PKG+AY+EF ++VQ A+ ++ES
Sbjct: 103 NVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLF 162
Query: 122 HGRQLKVTVKRTNVPGMKQ-HRP 143
GRQ+KV KRTN PG+ +RP
Sbjct: 163 RGRQIKVMPKRTNKPGLSSTNRP 185
>gi|452842735|gb|EME44671.1| hypothetical protein DOTSEDRAFT_72205 [Dothistroma septosporum
NZE10]
Length = 238
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 82/130 (63%), Gaps = 21/130 (16%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN------ 74
MK R++EME EA LR+M A + ++ + ++ ++E++D+RS+FVGN
Sbjct: 53 MKKRVEEMEAEAAKLREMQASIDSQSDNLRE---------SKEDIDARSIFVGNVDYGAS 103
Query: 75 -----QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
HFQS G++NRVTI DKF G PKGYAYVEF + + V +AL LNES R +KV
Sbjct: 104 PEEIQAHFQSVGSINRVTILLDKFTGHPKGYAYVEFSEPQLVTQALVLNESVFRSRNIKV 163
Query: 129 TVKRTNVPGM 138
KRTN+PGM
Sbjct: 164 VPKRTNLPGM 173
>gi|58263254|ref|XP_569037.1| poly(A) binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134107872|ref|XP_777318.1| hypothetical protein CNBB1200 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260008|gb|EAL22671.1| hypothetical protein CNBB1200 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223687|gb|AAW41730.1| poly(A) binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 210
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 80/151 (52%), Gaps = 24/151 (15%)
Query: 13 NKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA------------ 60
N EL M+ RL EME E AL + GN + + G ++
Sbjct: 26 NVDEELALMQARLAEMEAEKNALAASTSASGNGTPVSHNVSGGETNETHEGDGNMEEDGE 85
Query: 61 NREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSE 108
+ E VD RSVF+GN HFQ+CGT+NRVTI DKF G PKGYAYVEF +
Sbjct: 86 SSEAVDMRSVFIGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPS 145
Query: 109 AVQEALHLNESELHGRQLKVTVKRTNVPGMK 139
VQ AL LNES GR L+V KRTNVPGM
Sbjct: 146 IVQNALVLNESMFRGRMLQVKEKRTNVPGMN 176
>gi|281209044|gb|EFA83219.1| polyadenylate-binding protein 2 [Polysphondylium pallidum PN500]
Length = 202
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 79/133 (59%), Gaps = 24/133 (18%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
EL++MK R KEMEEE L ++ V + ++EE+D+RSV+VGN
Sbjct: 45 ELEEMKRRYKEMEEETKKLNELQNSVD------------SNGFGDQEEIDARSVYVGNVE 92
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
+FQSCGTVNR+TI DK G PKG YVEF+ E+VQ AL LN++ + R
Sbjct: 93 YTSTQEDILAYFQSCGTVNRITILNDKTTGHPKGCCYVEFVDRESVQNALVLNDTTFNNR 152
Query: 125 QLKVTVKRTNVPG 137
Q+KVT KRTN+P
Sbjct: 153 QIKVTAKRTNLPA 165
>gi|393246337|gb|EJD53846.1| RNA-binding domain-containing protein, partial [Auricularia
delicata TFB-10046 SS5]
Length = 170
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 80/134 (59%), Gaps = 16/134 (11%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E++ MK R++EME+EA LR+M A+ +++ VD+RSV+VGN
Sbjct: 2 EIEAMKQRVREMEQEALKLREMQAEAEAGAEGASGVEGE----EDKDAVDARSVYVGNVD 57
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCGT+NRVTI DKF G PKGYAYVEF + VQ A+ LNES GR
Sbjct: 58 YSASPEEIQAHFQSCGTINRVTILCDKFTGHPKGYAYVEFAEPAFVQHAMVLNESLFRGR 117
Query: 125 QLKVTVKRTNVPGM 138
+KV KRTNVPG
Sbjct: 118 LIKVVPKRTNVPGF 131
>gi|158292594|ref|XP_313998.3| AGAP005117-PA [Anopheles gambiae str. PEST]
gi|157017065|gb|EAA09415.5| AGAP005117-PA [Anopheles gambiae str. PEST]
Length = 221
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 83/138 (60%), Gaps = 15/138 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE--EVDSRSVFVGN 74
EL+ +K R+KEMEEEA L+Q+ ++V +M + P L E EVD+RS++VGN
Sbjct: 41 ELEAIKARVKEMEEEAEKLKQLQSEVTKQM-TLGSPTGSTPMLTAEEKAEVDNRSIYVGN 99
Query: 75 -----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 122
HF CG +NRVTI +K G PKG+AY+EF E V+ AL +NE+
Sbjct: 100 VDYGATAEELEAHFHGCGAINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFR 159
Query: 123 GRQLKVTVKRTNVPGMKQ 140
GRQ+KV KRTN PGM Q
Sbjct: 160 GRQIKVNPKRTNRPGMCQ 177
>gi|170036993|ref|XP_001846345.1| polyadenylate-binding protein 2 [Culex quinquefasciatus]
gi|167879973|gb|EDS43356.1| polyadenylate-binding protein 2 [Culex quinquefasciatus]
Length = 218
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 82/135 (60%), Gaps = 13/135 (9%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGG-SSLANREEVDSRSVFVGN- 74
EL+ +K R+KEMEEEA L+Q+ ++V +M A S + E+D+RS++VGN
Sbjct: 41 ELEAIKARVKEMEEEAEKLKQLQSEVTKQMTLGSPTGATPIMSAEEKAEIDNRSIYVGNV 100
Query: 75 ----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHG 123
HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+ G
Sbjct: 101 DYGATAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRG 160
Query: 124 RQLKVTVKRTNVPGM 138
RQ+KV KRTN PGM
Sbjct: 161 RQIKVNPKRTNRPGM 175
>gi|325186974|emb|CCA21518.1| polyadenylatebinding protein 2 putative [Albugo laibachii Nc14]
Length = 235
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 87/161 (54%), Gaps = 42/161 (26%)
Query: 16 VELDDMKIRLKEMEEEATALRQMHAKV-----------------------GNEMASKQDP 52
E++DMK R+KEMEEEA L +M ++V G+ + S +
Sbjct: 37 AEIEDMKRRVKEMEEEAAKLSEMQSQVESQMGKNTASSLNELNASASGSSGHAIGSNSNT 96
Query: 53 AA---GGSSLANREEVDSRSVFVGNQH-----------FQSCGTVNRVTIRTDKF-GQPK 97
+ GGSS A +D SV+VG FQSCGT+NRVTI DKF GQPK
Sbjct: 97 STNPNGGSSTA----LDDSSVYVGQVDYGSTPEELQALFQSCGTINRVTILCDKFTGQPK 152
Query: 98 GYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
GYAY+EF +AV+ AL LN++ GRQLKVT KR NV G
Sbjct: 153 GYAYIEFASKDAVESALLLNDTMFRGRQLKVTPKRQNVRGF 193
>gi|402217494|gb|EJT97574.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 213
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 88/165 (53%), Gaps = 33/165 (20%)
Query: 2 EGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLAN 61
EG+D+D+ + EL+++K R++ MEEEA LR + A S QD AG A
Sbjct: 13 EGEDIDLEGYDGS--ELEEIKARMRLMEEEAATLRSLQADAPVRAPSAQD-GAGTPVPAP 69
Query: 62 RE------------------EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK 92
+E +VD RSV+VGN HF SCG +NRVTI DK
Sbjct: 70 KEGEPNGEHEEIQVEGEAQEDVDKRSVYVGNVDYSATPTDISNHFASCGQINRVTIVCDK 129
Query: 93 F-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVP 136
F G PKG+ Y+EF + E VQ AL LNES L GR + V KRTN+P
Sbjct: 130 FSGHPKGFCYIEFAEPETVQNALLLNESMLCGRIISVVAKRTNIP 174
>gi|157093141|gb|ABV22225.1| RNA recognition motif protein [Karlodinium micrum]
Length = 197
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 84/135 (62%), Gaps = 23/135 (17%)
Query: 16 VELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN- 74
E+++M+ +++EMEEEA L+Q+ V + G + +REEVD RSV++G+
Sbjct: 20 AEIEEMQKKVQEMEEEAEKLKQLTDSVEEQ----------GEGI-DREEVDKRSVYIGSV 68
Query: 75 ----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHG 123
+HF+SCG +NR+TI DK+ G PKG+AYVEF ++VQ +L LN S G
Sbjct: 69 DYGSTPEELQEHFKSCGQINRITILVDKYSGHPKGFAYVEFADEQSVQNSLLLNGSLFRG 128
Query: 124 RQLKVTVKRTNVPGM 138
RQLKV KRTNVPG
Sbjct: 129 RQLKVMQKRTNVPGF 143
>gi|348679138|gb|EGZ18955.1| hypothetical protein PHYSODRAFT_409429 [Phytophthora sojae]
Length = 167
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 88/150 (58%), Gaps = 22/150 (14%)
Query: 16 VELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE--------EVDS 67
E++DMK R+KEMEEEA L +M ++V ++M ++ A+ + + ++D
Sbjct: 20 AEIEDMKRRVKEMEEEAAKLSEMQSEVESQMG--KNTASTLNEMGAAGAAASAQPVQMDD 77
Query: 68 RSVFVGNQH-----------FQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALH 115
S+++G FQSCGT+NRVTI DKF GQPKGYAY+EF +AV+ AL
Sbjct: 78 TSIYIGQVDYGSTPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIEFASRDAVESALL 137
Query: 116 LNESELHGRQLKVTVKRTNVPGMKQHRPRR 145
LN++ GRQLKVT KR NV G R R
Sbjct: 138 LNDTMFRGRQLKVTPKRQNVRGFNMTRGGR 167
>gi|449550073|gb|EMD41038.1| hypothetical protein CERSUDRAFT_62981 [Ceriporiopsis subvermispora
B]
Length = 195
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE---VDSRSVFVGNQ-- 75
MK R++EME EA LR++ A S +P G + E+ DSRS+FVGN
Sbjct: 32 MKQRVEEMEREANKLRELQAAAEKAERSGSEPGDTGVPMETEEDKAAADSRSIFVGNVDY 91
Query: 76 ---------HFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
HFQSCG +NRVTI DKF G PKGYAYVEF + E V A ++ S GR
Sbjct: 92 SATPEEIQVHFQSCGVINRVTILCDKFTGHPKGYAYVEFAEPEHVDAATAMDNSLFRGRL 151
Query: 126 LKVTVKRTNVP 136
+KVT KRTNVP
Sbjct: 152 IKVTAKRTNVP 162
>gi|301097894|ref|XP_002898041.1| polyadenylate-binding protein 2 [Phytophthora infestans T30-4]
gi|262106486|gb|EEY64538.1| polyadenylate-binding protein 2 [Phytophthora infestans T30-4]
Length = 225
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 88/149 (59%), Gaps = 24/149 (16%)
Query: 11 TENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE------- 63
TE E++DMK R+KEMEEEA L +M ++V ++M ++ A+ + +
Sbjct: 39 TEAVDAEIEDMKRRVKEMEEEAAKLSEMQSEVESQMG--KNTASTLNEMNGGAAGAAANA 96
Query: 64 ---EVDSRSVFVGNQH-----------FQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSE 108
++D S+++G FQSCGT+NRVTI DKF GQPKGYAY+EF +
Sbjct: 97 QPAQMDDTSIYIGQVDYGSTPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIEFASHD 156
Query: 109 AVQEALHLNESELHGRQLKVTVKRTNVPG 137
AV+ AL LN++ GRQLKVT KR NV G
Sbjct: 157 AVESALLLNDTMFRGRQLKVTPKRQNVRG 185
>gi|405118694|gb|AFR93468.1| poly(A) binding protein [Cryptococcus neoformans var. grubii H99]
Length = 201
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 80/151 (52%), Gaps = 24/151 (15%)
Query: 13 NKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA------------ 60
N EL M+ RL EME E AL + GN + + G ++
Sbjct: 17 NVDEELALMQARLAEMEAEKNALAASTSASGNGTPVPPNVSGGETNETHEGDGNMEEDGE 76
Query: 61 NREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSE 108
+ E VD RSVF+GN HFQ+CGT+NRVTI DKF G PKGYAYVEF +
Sbjct: 77 SSEAVDMRSVFIGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPS 136
Query: 109 AVQEALHLNESELHGRQLKVTVKRTNVPGMK 139
VQ AL LNES GR L+V KRTNVPGM
Sbjct: 137 IVQNALVLNESMFKGRMLQVKEKRTNVPGMN 167
>gi|312373984|gb|EFR21644.1| hypothetical protein AND_16675 [Anopheles darlingi]
Length = 229
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 83/138 (60%), Gaps = 15/138 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE--EVDSRSVFVGN 74
EL+ +K R+KEMEEEA L+Q+ ++V +M + P L E EVD+RS++VGN
Sbjct: 41 ELEAIKARVKEMEEEAEKLKQLQSEVTKQM-TLGSPTGSTPMLTAEEKAEVDNRSIYVGN 99
Query: 75 -----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 122
HF CG +NRVTI +K G PKG+AY+EF E V+ AL +NE+
Sbjct: 100 VDYGATAEELEAHFHGCGAINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFR 159
Query: 123 GRQLKVTVKRTNVPGMKQ 140
GRQ+KV KRTN PG+ Q
Sbjct: 160 GRQIKVNPKRTNRPGLCQ 177
>gi|157109619|ref|XP_001650751.1| glycine rich RNA binding protein, putative [Aedes aegypti]
gi|108868425|gb|EAT32650.1| AAEL015143-PB [Aedes aegypti]
Length = 222
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 82/136 (60%), Gaps = 15/136 (11%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE--EVDSRSVFVGN 74
EL+ +K R+KEMEEEA L+Q+ +V +M + P L E E+D+RS++VGN
Sbjct: 41 ELEAIKARVKEMEEEAEKLKQLQTEVTKQM-TLGSPTGVTPILTAEEKAEIDNRSIYVGN 99
Query: 75 -----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 122
HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+
Sbjct: 100 VDYGATAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFR 159
Query: 123 GRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PGM
Sbjct: 160 GRQIKVNPKRTNRPGM 175
>gi|157109621|ref|XP_001650752.1| glycine rich RNA binding protein, putative [Aedes aegypti]
gi|94469160|gb|ABF18429.1| splicing factor RNPS1 [Aedes aegypti]
gi|108868426|gb|EAT32651.1| AAEL015143-PA [Aedes aegypti]
Length = 220
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 82/136 (60%), Gaps = 15/136 (11%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE--EVDSRSVFVGN 74
EL+ +K R+KEMEEEA L+Q+ +V +M + P L E E+D+RS++VGN
Sbjct: 41 ELEAIKARVKEMEEEAEKLKQLQTEVTKQM-TLGSPTGVTPILTAEEKAEIDNRSIYVGN 99
Query: 75 -----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 122
HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+
Sbjct: 100 VDYGATAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFR 159
Query: 123 GRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PGM
Sbjct: 160 GRQIKVNPKRTNRPGM 175
>gi|118096584|ref|XP_001232211.1| PREDICTED: polyadenylate-binding protein 2 [Gallus gallus]
Length = 249
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 98/188 (52%), Gaps = 26/188 (13%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
EL+ +K R++EMEEE L+++ + + + + + E D RS++VGN
Sbjct: 66 ELEAIKARVREMEEEDKRLKELQLEAESCLLMGSEAGLFQRMTEGKVEADQRSIYVGNVD 125
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HF CG +NRVTI DKF G PKGYAY+EF Q +V+ A+ L+ES GR
Sbjct: 126 YGGTAEELESHFNICGRINRVTILCDKFSGHPKGYAYIEFEQKSSVKAAVELDESIFRGR 185
Query: 125 QLKVTVKRTNVPGMKQ-HRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIP------RFRM 177
+KV KRTN+PG+ R R F Q+RG +IP + Y YG P +R
Sbjct: 186 VIKVLPKRTNMPGISSTDRGGRRGHF---QARGGLIPRWGY----YGGQPVRLRGRTYRG 238
Query: 178 PMRYSPYY 185
R P+Y
Sbjct: 239 RARLLPWY 246
>gi|156399361|ref|XP_001638470.1| predicted protein [Nematostella vectensis]
gi|156225591|gb|EDO46407.1| predicted protein [Nematostella vectensis]
Length = 173
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 78/124 (62%), Gaps = 15/124 (12%)
Query: 28 MEEEATALRQMHAKVGNEMASKQDPAAGG-SSLANREEVDSRSVFVGN-----------Q 75
MEEEA L++M +V + S PAA G + + EVD+RSV+VGN Q
Sbjct: 1 MEEEAEKLKEMQKQVEKSIMSP--PAASGPKTFEEKAEVDARSVYVGNVDYSATAEELEQ 58
Query: 76 HFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 134
HF CG+VNRVTI DKF G PKG+AYVEF ++V A+ L++S GRQ+KV +KRTN
Sbjct: 59 HFHGCGSVNRVTILCDKFSGHPKGFAYVEFSDKDSVDNAVLLSDSLFKGRQIKVVLKRTN 118
Query: 135 VPGM 138
PG+
Sbjct: 119 RPGV 122
>gi|412993021|emb|CCO16554.1| predicted protein [Bathycoccus prasinos]
Length = 221
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 88/157 (56%), Gaps = 34/157 (21%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGN-----EMAS---------------KQDPAAGG 56
E+ MK +L EME EA++LR+ + EMA ++ P
Sbjct: 7 EILKMKEKLAEMEREASSLREQEQGIDGKALDEEMAKHHHSDNNGQGQGGKPQKTPEELE 66
Query: 57 SSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFL 105
A R+E+DSRSVFVG +HF+ CGTVNRVTI TDKF PKG+AYVEFL
Sbjct: 67 KEKAERQEIDSRSVFVGQVDYGAEPGMLAEHFKKCGTVNRVTILTDKFENPKGFAYVEFL 126
Query: 106 QSEAVQEALHLNES---ELHGRQLKVTVKRTNVPGMK 139
+ +AV A+ L+ + E R+LKV+ KRTNVPGMK
Sbjct: 127 EKDAVDAAVLLDGTGLEEFPQRKLKVSAKRTNVPGMK 163
>gi|391328788|ref|XP_003738866.1| PREDICTED: polyadenylate-binding protein 2-like [Metaseiulus
occidentalis]
Length = 193
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 83/134 (61%), Gaps = 20/134 (14%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
+LD ++ R++EM EEA L+++ ++V D S ++E+D RS++VGN
Sbjct: 25 DLDSLRARVREMAEEAEKLKKLQSEV--------DKNTTQLSEQEKKEIDQRSIYVGNVD 76
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
QHF CG+VNRVTI DKF G PKG+AY+EF ++V+ A+ +++S GR
Sbjct: 77 YGATAEELEQHFHGCGSVNRVTILCDKFSGHPKGFAYIEFADKDSVETAMAMDDSLFRGR 136
Query: 125 QLKVTVKRTNVPGM 138
Q+KV KRTN+PG+
Sbjct: 137 QIKVLQKRTNMPGI 150
>gi|324515910|gb|ADY46353.1| Polyadenylate-binding protein 2 [Ascaris suum]
Length = 217
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 98/166 (59%), Gaps = 24/166 (14%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEM---ASKQDPAAGGSSLANREEVDSRSVFVG 73
+++ + R+KE+EEEA +RQM V +M +S ++ +S+ + E DSRS++VG
Sbjct: 37 DMEALTNRMKEIEEEAQLIRQMQNDVEKQMNMSSSSSLASSTLASMEEKIEADSRSIYVG 96
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG+VNRVTI TDK+ G PKG+AY+EF E+VQ A+ L+ES
Sbjct: 97 NVDYCSTAEELEAHFHGCGSVNRVTILTDKYTGHPKGFAYIEFADKESVQTAMALDESLF 156
Query: 122 HGRQLKVTVKRTNVPGMK-QHRPRRPNPFMVYQSRGA--IIPPFLY 164
GRQ+KV KRTN PG+ +RP R + RG +I ++Y
Sbjct: 157 RGRQIKVCPKRTNRPGVSTTNRPPRA------RGRGGARVIVKYIY 196
>gi|395330550|gb|EJF62933.1| RNA-binding domain-containing protein, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 168
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 79/135 (58%), Gaps = 21/135 (15%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSL-----ANREEVDSRSVFVGN- 74
MK R++EME EA LR++ A + A GG + ++ D+RS++VGN
Sbjct: 5 MKQRVEEMEREANKLRELQAAA----EKAEQGAQGGEQVPMETEEDKAAADARSIYVGNV 60
Query: 75 ----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHG 123
QHFQ+CGT+NRVTI DKF G PKGYAYVEF + E + AL ++ S G
Sbjct: 61 DYSATPEEIQQHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPEFIDAALAMDNSLFRG 120
Query: 124 RQLKVTVKRTNVPGM 138
R +KVT KRTN+PG
Sbjct: 121 RLIKVTPKRTNIPGF 135
>gi|68471223|ref|XP_720388.1| hypothetical protein CaO19.7097 [Candida albicans SC5314]
gi|77022430|ref|XP_888659.1| hypothetical protein CaO19_7097 [Candida albicans SC5314]
gi|46442253|gb|EAL01544.1| hypothetical protein CaO19.7097 [Candida albicans SC5314]
gi|76573472|dbj|BAE44556.1| hypothetical protein [Candida albicans]
gi|238883199|gb|EEQ46837.1| polyadenylate-binding protein 2 [Candida albicans WO-1]
Length = 187
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 94/155 (60%), Gaps = 26/155 (16%)
Query: 7 DMIETENKQV---ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE 63
D I EN+QV +++K +L+EME+E LR++H+++ +E + G + E
Sbjct: 3 DQIPVENQQVPSENSEEVKNKLEEMEQETAKLRELHSQLSSE-------STNGVTHPTDE 55
Query: 64 E---VDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSE 108
E D+RS+++GN QHF S G VNRVTI T+KF GQPKG+AY+EF ++
Sbjct: 56 EKRDTDARSIYIGNVDYGSTPLELQQHFSSAGVVNRVTILTNKFTGQPKGFAYLEFADTD 115
Query: 109 AVQEAL-HLNESELHGRQLKVTVKRTNVPGMKQHR 142
AV +A+ L+ S RQLKV+ KRTN+PG+ R
Sbjct: 116 AVNKAVATLDGSTFRERQLKVSAKRTNIPGISVKR 150
>gi|156059388|ref|XP_001595617.1| hypothetical protein SS1G_03706 [Sclerotinia sclerotiorum 1980]
gi|154701493|gb|EDO01232.1| hypothetical protein SS1G_03706 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 182
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 77/127 (60%), Gaps = 21/127 (16%)
Query: 13 NKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFV 72
N + E+ MK R+ EMEEEA LR+M A + + ++ ++E++DSRS+FV
Sbjct: 20 NDEEEISAMKRRVAEMEEEAAKLREMQATLDQQSTDLRE---------DKEDIDSRSIFV 70
Query: 73 GN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESE 120
GN HFQSCG++NRVTI DKF G PKGYAYVEF++ V +AL LNES
Sbjct: 71 GNVDYSASPEDIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFVEPSLVAQALVLNESV 130
Query: 121 LHGRQLK 127
GR LK
Sbjct: 131 FKGRNLK 137
>gi|393215597|gb|EJD01088.1| polyadenylate-binding protein 2 [Fomitiporia mediterranea MF3/22]
Length = 201
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 78/143 (54%), Gaps = 37/143 (25%)
Query: 21 MKIRLKEMEEEATALRQMHA---------------KVGNEMASKQDPAAGGSSLANREEV 65
MK RL+E+E+EA ALRQM G+EM + +DP A
Sbjct: 31 MKSRLEEIEKEAEALRQMREAQEKEAKAIAAVAAPSEGDEMETDEDPHAA---------- 80
Query: 66 DSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEA 113
D RSV+VGN HFQ+CGT+NRVTI DKF G PKGYAYVEF + V+ A
Sbjct: 81 DERSVYVGNVDYGASPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPSFVETA 140
Query: 114 LHLNESELHGRQLKVTVKRTNVP 136
LNES GR +KV KRTN+P
Sbjct: 141 QTLNESLFKGRLIKVVPKRTNIP 163
>gi|328873645|gb|EGG22012.1| polyadenylate-binding protein 2 [Dictyostelium fasciculatum]
Length = 243
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 79/136 (58%), Gaps = 22/136 (16%)
Query: 13 NKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFV 72
N+ EL++MK R KE+EEE L+++ + A G ++EE D RSV+V
Sbjct: 54 NQDPELEEMKRRYKEIEEETQKLKELQNSL----------EANGGFGGDQEETDGRSVYV 103
Query: 73 GN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESE 120
GN HFQ CGT++R+TI DK G PKG Y+EFL+ EAV AL LNE+
Sbjct: 104 GNVEYTSTQEEILLHFQPCGTIHRITILNDKMTGHPKGCCYIEFLEREAVTNALMLNETM 163
Query: 121 LHGRQLKVTVKRTNVP 136
RQ+KVT KRTN+P
Sbjct: 164 FKDRQIKVTPKRTNLP 179
>gi|358340157|dbj|GAA28424.2| polyadenylate-binding protein 2 [Clonorchis sinensis]
Length = 288
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 99/193 (51%), Gaps = 23/193 (11%)
Query: 4 DDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE 63
+D+ + + EL+ +K R KE+E +A L + SK + S ++
Sbjct: 24 EDISVSDDIQFDAELEAIKERFKEIEADANKLHDLRHLTDKSPVSKTSLSV--LSDEDKA 81
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 111
EVD RSV+VGN HF++CG +NRVTI +K+ GQPKG+AY+EF +AV+
Sbjct: 82 EVDLRSVYVGNVDYGATADELEAHFRACGPINRVTILCNKYTGQPKGFAYIEFDTRDAVE 141
Query: 112 EALHLNESELHGRQLKVTVKRTNVPGMK-QHRPRRPNPFMVYQSRGAIIPPFLYSPYGYG 170
A+ L+ES R LKV KRTNVPGM +RP P+M PF P YG
Sbjct: 142 AAMALDESNFRNRALKVLPKRTNVPGMSMTNRP----PYMRGGRGRGRGMPFGLRPAFYG 197
Query: 171 ----KIPRFRMPM 179
+ PR R +
Sbjct: 198 GGRMRFPRSRCSI 210
>gi|392576908|gb|EIW70038.1| hypothetical protein TREMEDRAFT_43661 [Tremella mesenterica DSM
1558]
Length = 186
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 80/141 (56%), Gaps = 15/141 (10%)
Query: 13 NKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE---VDSRS 69
N EL M+ RL +ME E A+ +K + + G +S+ + + VD+RS
Sbjct: 19 NVDEELSLMQARLAQMEAEKNAIAAGGSKPSPAPKIQGEEGEGDASMEDEDAPAAVDARS 78
Query: 70 VFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLN 117
V++GN HFQ+CGT+NRVTI DKF G PKGYAYVEF + VQ AL LN
Sbjct: 79 VYIGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPSIVQNALVLN 138
Query: 118 ESELHGRQLKVTVKRTNVPGM 138
+S GR L V KRTN+PGM
Sbjct: 139 DSMFRGRLLSVREKRTNIPGM 159
>gi|171474005|gb|AAX31042.2| SJCHGC09749 protein [Schistosoma japonicum]
gi|226468246|emb|CAX69800.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
gi|226489703|emb|CAX75002.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
gi|226489705|emb|CAX75003.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
gi|226489707|emb|CAX75004.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
Length = 214
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 95/166 (57%), Gaps = 19/166 (11%)
Query: 4 DDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE 63
+D+ + + + EL+ +K R KE+E +A L + + SK + + S ++
Sbjct: 24 EDVSVTDEMHFDAELEAIKERFKEIEADANKLHDLRRVIDKSPISKSNNS--NLSDEDKT 81
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 111
EVD RSV+VGN HF+ CG +NRVTI +KF G PKG+AY+EF +AV+
Sbjct: 82 EVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTILCNKFTGHPKGFAYIEFDTRDAVE 141
Query: 112 EALHLNESELHGRQLKVTVKRTNVPGMK-QHRPRRPNPFMVYQSRG 156
A+ L++S RQLKV KRTNVPGM +RP PF+ ++RG
Sbjct: 142 AAIALDDSSFRSRQLKVLPKRTNVPGMSMTNRP----PFVRGRARG 183
>gi|256071828|ref|XP_002572240.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360043837|emb|CCD81383.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 214
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 95/166 (57%), Gaps = 19/166 (11%)
Query: 4 DDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE 63
+D+ + + + EL+ +K R KE+E +A L + + SK + + S ++
Sbjct: 24 EDVSVTDEMHFDAELEAIKERFKEIEADANKLHDLRRVIDKSPISKSNNS--NLSDEDKT 81
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 111
EVD RSV+VGN HF+ CG +NRVTI +KF G PKG+AY+EF +AV+
Sbjct: 82 EVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTILCNKFTGHPKGFAYIEFDTRDAVE 141
Query: 112 EALHLNESELHGRQLKVTVKRTNVPGMK-QHRPRRPNPFMVYQSRG 156
A+ L++S RQLKV KRTNVPGM +RP PF+ ++RG
Sbjct: 142 AAIALDDSSFRSRQLKVLPKRTNVPGMSMTNRP----PFVRGRARG 183
>gi|453080432|gb|EMF08483.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 211
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 78/127 (61%), Gaps = 21/127 (16%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN------ 74
MK R++EME EA LR+M A + N+ S ++ ++E++D+RS+FVGN
Sbjct: 31 MKKRVEEMEAEAAKLREMQASIDNQSDSLRE---------SKEDIDNRSIFVGNVDYGAS 81
Query: 75 -----QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
HFQS G++NRVTI DKF G PKGYAYVEF + + V AL LNES R +KV
Sbjct: 82 PEEIQAHFQSVGSINRVTILLDKFTGHPKGYAYVEFSEPQFVTSALVLNESVFRNRNIKV 141
Query: 129 TVKRTNV 135
KRTN+
Sbjct: 142 VPKRTNL 148
>gi|296803623|ref|XP_002842664.1| RNP domain-containing protein [Arthroderma otae CBS 113480]
gi|238846014|gb|EEQ35676.1| RNP domain-containing protein [Arthroderma otae CBS 113480]
Length = 186
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 79/131 (60%), Gaps = 21/131 (16%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ M+ RL +ME EA L +M A + + + ++ ++E++D+RS+FVGN
Sbjct: 25 EIAAMRERLTKMESEAAKLHEMQASLDQQTENLRE---------DKEDIDARSIFVGNVD 75
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR
Sbjct: 76 YAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALVLNESLFRGR 135
Query: 125 QLKVTVKRTNV 135
LKV KRTN+
Sbjct: 136 NLKVVPKRTNL 146
>gi|66818257|ref|XP_642788.1| polyadenylate-binding protein 2 [Dictyostelium discoideum AX4]
gi|74997256|sp|Q54ZS8.1|PABP2_DICDI RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName:
Full=Poly(A)-binding protein II; Short=PABII
gi|60470900|gb|EAL68872.1| polyadenylate-binding protein 2 [Dictyostelium discoideum AX4]
Length = 222
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 93/171 (54%), Gaps = 34/171 (19%)
Query: 10 ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSL-------ANR 62
ET + EL++MK R +EMEEEA L ++ + + + GG+ ++
Sbjct: 36 ETSFEDPELEEMKKRFREMEEEAKKLTELQNNLESNITGNNGVGIGGNIGGGGGLMNTDQ 95
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAV 110
EE+DSRSV+VGN +FQSCGTVNR+TI +DK G PKG YVEF+ E++
Sbjct: 96 EEIDSRSVYVGNVDYKSTHDQILAYFQSCGTVNRITILSDKTTGHPKGCCYVEFVNKESI 155
Query: 111 QEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPP 161
A+ LN+S + RQLK+T KRTN+P Y R ++PP
Sbjct: 156 INAMALNDSFFNERQLKITPKRTNLP---------------YYMRQGVLPP 191
>gi|327302280|ref|XP_003235832.1| hypothetical protein TERG_02884 [Trichophyton rubrum CBS 118892]
gi|326461174|gb|EGD86627.1| hypothetical protein TERG_02884 [Trichophyton rubrum CBS 118892]
Length = 186
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 79/131 (60%), Gaps = 21/131 (16%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ M+ RL +ME EA L +M A + + + ++ ++E++D+RS+FVGN
Sbjct: 25 EIAAMRERLTKMESEAAKLHEMQASLDQQTENLRE---------DKEDIDARSIFVGNVD 75
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR
Sbjct: 76 YAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALVLNESLFRGR 135
Query: 125 QLKVTVKRTNV 135
+KV KRTN+
Sbjct: 136 NIKVVPKRTNL 146
>gi|315039445|ref|XP_003169098.1| polyadenylate-binding protein 2 [Arthroderma gypseum CBS 118893]
gi|311337519|gb|EFQ96721.1| polyadenylate-binding protein 2 [Arthroderma gypseum CBS 118893]
Length = 186
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 79/131 (60%), Gaps = 21/131 (16%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ M+ RL +ME EA L +M A + + + ++ ++E++D+RS+FVGN
Sbjct: 25 EIAAMRERLTKMESEAAKLHEMQASLDQQTENLRE---------DKEDIDARSIFVGNVD 75
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR
Sbjct: 76 YAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALVLNESLFRGR 135
Query: 125 QLKVTVKRTNV 135
+KV KRTN+
Sbjct: 136 NIKVVPKRTNL 146
>gi|449282485|gb|EMC89318.1| Polyadenylate-binding protein 2, partial [Columba livia]
Length = 178
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 100/186 (53%), Gaps = 28/186 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
EL+ +K R++EME+E L+++ A+ ++S+ + EVD RSV+VGN
Sbjct: 1 ELEAIKARVQEMEKEDERLKKLEAENRFLLSSE------AGLIPKTTEVDQRSVYVGNVD 54
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HF SCG VNRVTI DKF G PKGYAY+EF + +V+ A+ L+ES GR
Sbjct: 55 YGSTAEELESHFHSCGQVNRVTILCDKFSGHPKGYAYIEFEEKSSVKAAVELDESVFRGR 114
Query: 125 QLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPM----- 179
+KV KRTN+PG+ R +Q+RG + + Y G+ PR R M
Sbjct: 115 VIKVLPKRTNMPGISS--TDRGGYRGCFQARGGLSQ---HGGYYRGQQPRVRGRMYRGRA 169
Query: 180 RYSPYY 185
R P+Y
Sbjct: 170 RLLPWY 175
>gi|50420005|ref|XP_458535.1| DEHA2D01540p [Debaryomyces hansenii CBS767]
gi|49654202|emb|CAG86667.1| DEHA2D01540p [Debaryomyces hansenii CBS767]
Length = 218
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 84/135 (62%), Gaps = 20/135 (14%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E + + R++EME+EA LR++H+++ N+ S DP S R ++DSRSV++GN
Sbjct: 45 ESNAVNSRMEEMEKEAAKLRELHSQLSND--SNNDP-----SEEERRDIDSRSVYIGNVD 97
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL-HLNESELHG 123
QHF S G VNRVTI +KF GQPKG+AY+EF + V +A+ L+ S
Sbjct: 98 YGSTPLELQQHFSSGGVVNRVTIPLNKFTGQPKGFAYLEFADIDGVNKAVATLDGSTFRD 157
Query: 124 RQLKVTVKRTNVPGM 138
R+LKV KRTNVPGM
Sbjct: 158 RELKVCAKRTNVPGM 172
>gi|226470148|emb|CAX70355.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
Length = 214
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 94/166 (56%), Gaps = 19/166 (11%)
Query: 4 DDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE 63
+D+ + + + EL+ +K R KE+E +A L + + SK + + S ++
Sbjct: 24 EDVSVTDEMHFDAELEAIKERFKEIEADANKLHDLRRVIDKSPISKSNNS--NLSDEDKT 81
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 111
EVD RSV+VGN HF+ CG +NRVTI +KF G PKG+AY+EF +A +
Sbjct: 82 EVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTILCNKFTGHPKGFAYIEFDTRDAFE 141
Query: 112 EALHLNESELHGRQLKVTVKRTNVPGMK-QHRPRRPNPFMVYQSRG 156
A+ L++S RQLKV KRTNVPGM +RP PF+ ++RG
Sbjct: 142 AAIALDDSSFRSRQLKVLPKRTNVPGMSMTNRP----PFVRGRARG 183
>gi|213409842|ref|XP_002175691.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
gi|212003738|gb|EEB09398.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
Length = 174
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 84/144 (58%), Gaps = 23/144 (15%)
Query: 7 DMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVD 66
D+++ +++ EL MK R+ EME EA LR+M ++ E + ++ ++E +D
Sbjct: 8 DVVDVQDQ--ELQAMKARVAEMEAEAEKLREMQEQLDKESEALRN---------DKEALD 56
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL 114
++SV+VGN HF CG +NRVTI DKF G PKG+AY+EF + V AL
Sbjct: 57 AQSVYVGNVDYSVTPEELQAHFAECGPINRVTILCDKFTGHPKGFAYIEFAEPSVVPNAL 116
Query: 115 HLNESELHGRQLKVTVKRTNVPGM 138
N S LH R LKVT KR N+PGM
Sbjct: 117 LRNGSMLHDRPLKVTPKRMNIPGM 140
>gi|226482504|emb|CAX73851.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
Length = 214
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 94/166 (56%), Gaps = 19/166 (11%)
Query: 4 DDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE 63
+D+ + + + EL+ +K R KE+E +A L + + SK + + S ++
Sbjct: 24 EDVSVTDEMHFDAELEAIKERFKEIEADANKLHDLRRVIDKSPISKSNNS--NLSDEDKT 81
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 111
EVD RSV+VGN HF+ CG +NRVTI +KF G PKG+AY+EF +AV+
Sbjct: 82 EVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTILCNKFTGHPKGFAYIEFDTRDAVE 141
Query: 112 EALHLNESELHGRQLKVTVKRTNVPGMK-QHRPRRPNPFMVYQSRG 156
A+ L++S RQLKV KR NVPGM +RP PF+ ++RG
Sbjct: 142 AAIALDDSSFRSRQLKVLPKRINVPGMSMTNRP----PFVRGRARG 183
>gi|326518878|dbj|BAJ92600.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 246
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 107/196 (54%), Gaps = 29/196 (14%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASK---QDPAAGGSS----LANRE--EVDS 67
+L+ ++ R++EMEEEA L+++ ++V EM++ P +S L+ +E E D+
Sbjct: 52 DLEVIRARVREMEEEAEKLKKLQSQVDQEMSNTPVLSSPNCSKTSATYNLSEQEKAEADA 111
Query: 68 RSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALH 115
RSV+VGN HF CG++NRVTI +KF G PKG+AY+EF ++V A+
Sbjct: 112 RSVYVGNVDYAATAEELETHFHGCGSINRVTILCNKFDGHPKGFAYIEFADMDSVNTAMA 171
Query: 116 LNESELHGRQLKVTVKRTNVPGMK-QHRPRRPNPFMVYQ----SRGAIIPPFLYSPYGYG 170
+++S GRQ+KV KRTN PG+ +RP +++ SRG F Y Y
Sbjct: 172 MDDSLFRGRQIKVNPKRTNKPGISTTNRPVASRGRAMFRGRPMSRGGAQSSF-YGGYRPS 230
Query: 171 KIPRFRMPMR--YSPY 184
+ PR R Y PY
Sbjct: 231 RRPRGGYSRRAMYYPY 246
>gi|193678811|ref|XP_001952437.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1
[Acyrthosiphon pisum]
Length = 246
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 107/196 (54%), Gaps = 29/196 (14%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASK---QDPAAGGSS----LANRE--EVDS 67
+L+ ++ R++EMEEEA L+++ ++V EM++ P +S L+ +E E D+
Sbjct: 52 DLEVIRARVREMEEEAEKLKKLQSQVDQEMSNTPVLSSPNCSKTSATYNLSEQEKAEADA 111
Query: 68 RSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALH 115
RSV+VGN HF CG++NRVTI +KF G PKG+AY+EF ++V A+
Sbjct: 112 RSVYVGNVDYAATAEELETHFHGCGSINRVTILCNKFDGHPKGFAYIEFADMDSVNTAMA 171
Query: 116 LNESELHGRQLKVTVKRTNVPGMK-QHRPRRPNPFMVYQ----SRGAIIPPFLYSPYGYG 170
+++S GRQ+KV KRTN PG+ +RP +++ SRG F Y Y
Sbjct: 172 MDDSLFRGRQIKVNPKRTNKPGISTTNRPVASRGRAMFRGRPMSRGGAQSSF-YGGYRPS 230
Query: 171 KIPRFRMPMR--YSPY 184
+ PR R Y PY
Sbjct: 231 RRPRGGYSRRAMYYPY 246
>gi|328725437|ref|XP_003248478.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Acyrthosiphon pisum]
Length = 329
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 85/144 (59%), Gaps = 21/144 (14%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASK---QDPAAGGSSLA------NREEVDS 67
+L+ ++ R++EMEEEA L+++ ++V EM++ P +S + E D+
Sbjct: 135 DLEVIRARVREMEEEAEKLKKLQSQVDQEMSNTPVLSSPNCSKTSATYNLSEQEKAEADA 194
Query: 68 RSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALH 115
RSV+VGN HF CG++NRVTI +KF G PKG+AY+EF ++V A+
Sbjct: 195 RSVYVGNVDYAATAEELETHFHGCGSINRVTILCNKFDGHPKGFAYIEFADMDSVNTAMA 254
Query: 116 LNESELHGRQLKVTVKRTNVPGMK 139
+++S GRQ+KV KRTN PG+
Sbjct: 255 MDDSLFRGRQIKVNPKRTNKPGIS 278
>gi|241957093|ref|XP_002421266.1| cytoplasmic RNA-binding protein, putative [Candida dubliniensis
CD36]
gi|223644610|emb|CAX40598.1| cytoplasmic RNA-binding protein, putative [Candida dubliniensis
CD36]
Length = 187
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 94/155 (60%), Gaps = 26/155 (16%)
Query: 7 DMIETENKQV---ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE 63
D I EN+QV +++K ++++ME+EA LR++H+++ E + G + E
Sbjct: 3 DQIPVENQQVLPENAEEVKNKMEQMEQEAAKLRELHSQLSAE-------STNGITHPTDE 55
Query: 64 E---VDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSE 108
E D+RS+++GN QHF S G VNRVTI T+KF GQ KG+AY+EF+ ++
Sbjct: 56 EKRDADARSIYIGNVDYGSTPLELQQHFSSAGVVNRVTILTNKFTGQAKGFAYLEFVDTD 115
Query: 109 AVQEAL-HLNESELHGRQLKVTVKRTNVPGMKQHR 142
AV +A+ L+ S RQLKV+ KRTN+PG+ R
Sbjct: 116 AVDKAVATLDGSTFRERQLKVSAKRTNIPGISVKR 150
>gi|443723317|gb|ELU11799.1| hypothetical protein CAPTEDRAFT_18178 [Capitella teleta]
Length = 157
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 80/132 (60%), Gaps = 16/132 (12%)
Query: 28 MEEEATALRQMHAKVGNEM---ASKQDPAAGGSSLANREEVDSRSVFVGN---------- 74
MEEEA LR+M ++V ++ +S SL ++ + DSRS+++GN
Sbjct: 1 MEEEAEKLREMQSEVEKQLILNSSSMGSPTPAISLEDKLDADSRSIWIGNVDYAATAEEL 60
Query: 75 -QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKR 132
HF CG+VNR TI DKF G PKG+AYVEF+ ++V+ A L++S GRQ+KVT KR
Sbjct: 61 GSHFHGCGSVNRATILCDKFSGHPKGFAYVEFVDKDSVETAQALDDSLFKGRQIKVTPKR 120
Query: 133 TNVPGMKQ-HRP 143
TN PG+ +RP
Sbjct: 121 TNRPGISSTNRP 132
>gi|198438310|ref|XP_002131910.1| PREDICTED: similar to Polyadenylate-binding protein 2
(Poly(A)-binding protein 2) (Poly(A)-binding protein II)
(PABII) (Polyadenylate-binding nuclear protein 1)
(Nuclear poly(A)-binding protein 1) [Ciona intestinalis]
Length = 225
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 88/157 (56%), Gaps = 23/157 (14%)
Query: 3 GDDMDMIETENKQV-----ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS 57
GDD +++ N EL+ +K R+KEME EA L++M V +M P A +
Sbjct: 29 GDDSAVLDQSNGAADETDPELEAIKARVKEMEAEAEKLKEMQNDVEKQMTLS--PPASAT 86
Query: 58 ----SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAY 101
++ + E DSRSVFVGN QHF G++NRVTI D++ G PKG+AY
Sbjct: 87 FAFPTIEEKVEADSRSVFVGNVDYGATAEELEQHFHGTGSINRVTILCDRYSGHPKGFAY 146
Query: 102 VEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
VEF +E+V+ A L+ + GRQL+V KRTN G+
Sbjct: 147 VEFADTESVETATALDGTLFRGRQLQVNPKRTNKHGI 183
>gi|448101244|ref|XP_004199515.1| Piso0_001296 [Millerozyma farinosa CBS 7064]
gi|359380937|emb|CCE81396.1| Piso0_001296 [Millerozyma farinosa CBS 7064]
Length = 213
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 86/132 (65%), Gaps = 21/132 (15%)
Query: 20 DMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN----- 74
D+++R++EME+EA LR++++K+ E+ + ++ ++++DSRS+++GN
Sbjct: 49 DVQMRMEEMEKEAAKLRELNSKLNTEVDN--------ATSEEKKDIDSRSIYIGNVDYGA 100
Query: 75 ------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALH-LNESELHGRQL 126
QHF CG VNRVTI +KF G PKGYAY+EF +AV +A+ L+ S R++
Sbjct: 101 TPLELQQHFSGCGVVNRVTIPLNKFSGSPKGYAYLEFGDIDAVNKAIATLDGSTFRDREI 160
Query: 127 KVTVKRTNVPGM 138
KV+ KRTNVPG+
Sbjct: 161 KVSSKRTNVPGL 172
>gi|321248626|ref|XP_003191185.1| poly(A) binding protein [Cryptococcus gattii WM276]
gi|317457652|gb|ADV19398.1| Poly(A) binding protein, putative [Cryptococcus gattii WM276]
Length = 217
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 78/153 (50%), Gaps = 28/153 (18%)
Query: 13 NKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSL------------- 59
N EL M+ RL EME E AL + N + P GG
Sbjct: 33 NVDEELALMQARLAEMEAEKNALAASTSASAN--GTPVPPNVGGGETNETHEGDDNMEED 90
Query: 60 -ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQ 106
+ E VD RSVF+GN HFQ+CGT+NRVTI DKF G PKGYAYVEF +
Sbjct: 91 GESSEAVDMRSVFIGNVDYGATPEEIQGHFQACGTINRVTILCDKFTGHPKGYAYVEFAE 150
Query: 107 SEAVQEALHLNESELHGRQLKVTVKRTNVPGMK 139
VQ AL LNES GR L+V KRTNVPGM
Sbjct: 151 PSIVQNALVLNESMFRGRMLQVKEKRTNVPGMN 183
>gi|323454513|gb|EGB10383.1| hypothetical protein AURANDRAFT_23087 [Aureococcus anophagefferens]
Length = 187
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 77/133 (57%), Gaps = 21/133 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
EL++MK R++EME+EA L+ M ++ E G+ + D RS++VG
Sbjct: 33 ELEEMKRRVQEMEDEAAKLKAMQQELQVET---------GAEAKKENDTDERSIYVGQVD 83
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HF +CGT+NRVTI DKF G+ KGYAYVEF + +V A+ L+ S GR
Sbjct: 84 YDATPEELQAHFAACGTINRVTILCDKFTGRSKGYAYVEFEEPASVPTAVLLDNSIFKGR 143
Query: 125 QLKVTVKRTNVPG 137
QLKV KRTNVPG
Sbjct: 144 QLKVVAKRTNVPG 156
>gi|256071830|ref|XP_002572241.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360043836|emb|CCD81382.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 223
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 94/173 (54%), Gaps = 24/173 (13%)
Query: 4 DDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNE-------MASKQDPAAGG 56
+D+ + + + EL+ +K R KE+E +A L + + + S +
Sbjct: 24 EDVSVTDEMHFDAELEAIKERFKEIEADANKLHDLRRVIDKSPISTFRNLFSAAESNNSN 83
Query: 57 SSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEF 104
S ++ EVD RSV+VGN HF+ CG +NRVTI +KF G PKG+AY+EF
Sbjct: 84 LSDEDKTEVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTILCNKFTGHPKGFAYIEF 143
Query: 105 LQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK-QHRPRRPNPFMVYQSRG 156
+AV+ A+ L++S RQLKV KRTNVPGM +RP PF+ ++RG
Sbjct: 144 DTRDAVEAAIALDDSSFRSRQLKVLPKRTNVPGMSMTNRP----PFVRGRARG 192
>gi|225558865|gb|EEH07148.1| RNP domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 150
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 74/124 (59%), Gaps = 21/124 (16%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ MK R+ EME EA LR+M A + + S ++ ++E++D+RS+FVGN
Sbjct: 24 EIAAMKRRVAEMESEAAKLREMQASLDQQSESLRE---------DKEDIDARSIFVGNVD 74
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR
Sbjct: 75 YGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQALVLNESVFRGR 134
Query: 125 QLKV 128
LK
Sbjct: 135 NLKA 138
>gi|313247139|emb|CBY35961.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 79/131 (60%), Gaps = 13/131 (9%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEM-ASKQDPAAGGSSLANREEVDSRSVFVGN----- 74
+K R+K MEEEA L+ + ++V ++ A P ++ + E D+RS++VG
Sbjct: 42 IKQRVKAMEEEAEKLKALQSEVEQQITADVTSPKINFPTMEEKMETDNRSIYVGQVEYAT 101
Query: 75 ------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLK 127
QHF CG +NRVTI DKF G PKG+AY+EF + E+V +L L+ S L GRQ+K
Sbjct: 102 TAEELEQHFHGCGALNRVTIICDKFSGHPKGFAYIEFTEKESVDASLALDGSILCGRQIK 161
Query: 128 VTVKRTNVPGM 138
V KRTN PG+
Sbjct: 162 VMPKRTNRPGV 172
>gi|313235350|emb|CBY19695.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 79/131 (60%), Gaps = 13/131 (9%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEM-ASKQDPAAGGSSLANREEVDSRSVFVGN----- 74
+K R+K MEEEA L+ + ++V ++ A P ++ + E D+RS++VG
Sbjct: 42 IKQRVKAMEEEAEKLKALQSEVEQQITADVTSPKINFPTMEEKMETDNRSIYVGQVEYAT 101
Query: 75 ------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLK 127
QHF CG +NRVTI DKF G PKG+AY+EF + E+V +L L+ S L GRQ+K
Sbjct: 102 TAEELEQHFHGCGALNRVTIICDKFSGHPKGFAYIEFTEKESVDASLALDGSILCGRQIK 161
Query: 128 VTVKRTNVPGM 138
V KRTN PG+
Sbjct: 162 VMPKRTNRPGV 172
>gi|448113963|ref|XP_004202460.1| Piso0_001296 [Millerozyma farinosa CBS 7064]
gi|359383328|emb|CCE79244.1| Piso0_001296 [Millerozyma farinosa CBS 7064]
Length = 211
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 84/132 (63%), Gaps = 21/132 (15%)
Query: 20 DMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN----- 74
D+++R++EME+EA LR++++K+ E+ ++ ++++DSRS++VGN
Sbjct: 49 DVQMRMEEMEKEAAKLRELNSKLNTEV--------DNATSEEKKDIDSRSIYVGNVDYGA 100
Query: 75 ------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALH-LNESELHGRQL 126
QHF CG VNRVTI +KF G PKG+AY+EF +AV +A+ L+ S R++
Sbjct: 101 TPLELQQHFSGCGVVNRVTIPLNKFSGSPKGFAYLEFGDIDAVNKAIATLDGSTFRDREI 160
Query: 127 KVTVKRTNVPGM 138
KV KRTNVPG+
Sbjct: 161 KVLSKRTNVPGL 172
>gi|443713406|gb|ELU06276.1| hypothetical protein CAPTEDRAFT_174932 [Capitella teleta]
Length = 184
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 78/127 (61%), Gaps = 15/127 (11%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEM---ASKQDPAAGGSSLANREEVDSRSVFVG 73
EL+ +K R+KEMEEEA L++M ++V +M +S SL ++ + D+RS++VG
Sbjct: 57 ELEAIKARVKEMEEEAEKLKEMQSEVEKQMNLSSSSMGSPTPAVSLEDKLDADNRSIWVG 116
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG VNRVTI DKF G PKG+AYVEF+ ++VQ A L++S
Sbjct: 117 NVDYTATAEELEAHFHGCGCVNRVTILCDKFSGHPKGFAYVEFVDKDSVQTAQALDDSLF 176
Query: 122 HGRQLKV 128
GRQ+KV
Sbjct: 177 KGRQIKV 183
>gi|409080136|gb|EKM80497.1| hypothetical protein AGABI1DRAFT_100088 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 343
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 82/136 (60%), Gaps = 23/136 (16%)
Query: 10 ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSL-----ANREE 64
E ++K++ L MK R++EME EA LR+M A E A+ D + GG S ++
Sbjct: 24 EDDSKEIML--MKQRVEEMEREAKKLREMQA--AAEKAA--DTSEGGESAPMDTEEDKNL 77
Query: 65 VDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQE 112
+DSRSV+VGN HFQSCGT+NRVTI DKF G PKGYAYVEF +SE V
Sbjct: 78 IDSRSVYVGNVDYGATPEEIQGHFQSCGTINRVTILCDKFTGHPKGYAYVEFAESEHVDA 137
Query: 113 ALHLNESELHGRQLKV 128
AL ++ S GR +KV
Sbjct: 138 ALSMDNSLFRGRLIKV 153
>gi|324537487|gb|ADY49506.1| Polyadenylate-binding protein 2, partial [Ascaris suum]
Length = 127
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 77/120 (64%), Gaps = 14/120 (11%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNE--MASKQDPAAGGSSLANREEVDSRSVFVGN 74
E+D + R+KE+EEEA LR++ +V + M S + PA +SL ++ E D+RS+++GN
Sbjct: 8 EIDLLTSRMKEIEEEAAMLRRLQVEVEKQLNMNSSRPPARIYASLEDKVEADNRSIYIGN 67
Query: 75 -----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 122
HF CG+VNRVTI TDKF G PKG+AY+EF + E+VQ A+ LNE+ H
Sbjct: 68 VGCFATADELRAHFYGCGSVNRVTIPTDKFTGHPKGFAYMEFTEKESVQTAMALNETLFH 127
>gi|336373392|gb|EGO01730.1| hypothetical protein SERLA73DRAFT_70899 [Serpula lacrymans var.
lacrymans S7.3]
Length = 346
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 77/136 (56%), Gaps = 17/136 (12%)
Query: 10 ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE---VD 66
E E+K+++L MK R++EME EA LR++ A + G + EE D
Sbjct: 24 EAESKEIQL--MKQRVEEMEREAKKLRELQAAAETANGGTSTESDSGVPMETEEEKALSD 81
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL 114
SRSVFVGN HFQ+CGT+NRVTI DKF G PKGYAYVEF + + + AL
Sbjct: 82 SRSVFVGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPDFIDAAL 141
Query: 115 HLNESELHGRQLKVTV 130
++ S GR +KV V
Sbjct: 142 AMDNSLFRGRLIKVGV 157
>gi|313214618|emb|CBY40937.1| unnamed protein product [Oikopleura dioica]
gi|313226203|emb|CBY21346.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 85/139 (61%), Gaps = 17/139 (12%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMA-SKQDPAAGGS----SLANREEVDSRSVF 71
EL+ +K R+K ME EA L+++ ++V ++M+ A+ GS +L + + D+RS++
Sbjct: 32 ELEAIKERVKAMEAEAEKLKELQSEVESQMSMGDAGSASMGSANFPTLEEKVDADNRSIY 91
Query: 72 VGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNES 119
+G QHF CG +NRVTI DK+ GQPKG+AY+EF + E+V A+ L+ S
Sbjct: 92 IGQVDYSSTAEELEQHFHGCGALNRVTIICDKYSGQPKGFAYIEFTEKESVDAAIALDGS 151
Query: 120 ELHGRQLKVTVKRTNVPGM 138
RQ+KV KRTN PG+
Sbjct: 152 MFRDRQIKVMPKRTNKPGV 170
>gi|406603845|emb|CCH44661.1| hypothetical protein BN7_4230 [Wickerhamomyces ciferrii]
Length = 180
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 80/132 (60%), Gaps = 21/132 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
ELD+ + E++++A LR++HA + + + Q+ + ++D+RS++VGN
Sbjct: 28 ELDNEASKNGEVDDDAAKLRELHADLAKQESETQE---------EKSDIDARSIYVGNVD 78
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
+HFQS G +NRVTI +KF GQPKG+AY+EF + +V +L LN+S GR
Sbjct: 79 YDSSPEELQKHFQSVGVINRVTILLNKFTGQPKGFAYIEFAEPSSVVNSLVLNDSVFRGR 138
Query: 125 QLKVTVKRTNVP 136
LKV KRTN+P
Sbjct: 139 NLKVNPKRTNIP 150
>gi|426198097|gb|EKV48023.1| hypothetical protein AGABI2DRAFT_68353, partial [Agaricus bisporus
var. bisporus H97]
Length = 332
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 75/125 (60%), Gaps = 21/125 (16%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSL-----ANREEVDSRSVFVGN- 74
MK R++EME EA LR+M A E A+ D + GG S ++ +DSRSV+VGN
Sbjct: 5 MKQRVEEMEREAKKLREMQA--AAEKAA--DTSEGGESAPMDTEEDKNLIDSRSVYVGNV 60
Query: 75 ----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHG 123
HFQSCGT+NRVTI DKF G PKGYAYVEF +SE V AL ++ S G
Sbjct: 61 DYGATPEEIQGHFQSCGTINRVTILCDKFTGHPKGYAYVEFAESEHVDAALSMDNSLFRG 120
Query: 124 RQLKV 128
R +KV
Sbjct: 121 RLIKV 125
>gi|291403571|ref|XP_002717950.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Oryctolagus
cuniculus]
Length = 366
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 107/208 (51%), Gaps = 30/208 (14%)
Query: 1 MEGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS--- 57
+EGD D + + EL+ +K R++EMEEEA L+++ +V +M P G
Sbjct: 165 VEGDPGD---SAIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIM 221
Query: 58 SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 105
S+ R E D+RS++VGN HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 222 SIEERMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 281
Query: 106 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRG 156
E+V+ +L L+ES GRQ+KV KRTN PG+ ++R R N SR
Sbjct: 282 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRS 338
Query: 157 AIIPPFLYSPYGYGKIPRFRMPMRYSPY 184
F P G R R YSPY
Sbjct: 339 RFYSGFNSRPRGRIYRGRARATSWYSPY 366
>gi|443895148|dbj|GAC72494.1| splicing factor RNPS1, partial [Pseudozyma antarctica T-34]
Length = 160
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 71/124 (57%), Gaps = 17/124 (13%)
Query: 13 NKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFV 72
++ E++ MK R+ EME EA LR++ G + P S REEVDSRS++V
Sbjct: 42 DEDAEIEAMKQRVAEMEAEAAKLRELQQAAGEAGGAGLHP-----SEEEREEVDSRSIYV 96
Query: 73 GN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESE 120
GN QHFQSCGT+NRVTI DKF G PKGYAYVEF V A+ LNES
Sbjct: 97 GNVDYGATPEELQQHFQSCGTINRVTILCDKFTGHPKGYAYVEFADPSLVANAMVLNESL 156
Query: 121 LHGR 124
GR
Sbjct: 157 FRGR 160
>gi|294926226|ref|XP_002779060.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239887927|gb|EER10855.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 242
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 83/139 (59%), Gaps = 18/139 (12%)
Query: 17 ELDDMKIRLKEMEEEATALRQM--HAKVGNEMASKQDPAAG----GSSLANREEVDSRSV 70
E+ +M+ +++E+E+EA LRQM GN A+ D + A +E D RS+
Sbjct: 59 EIMEMQHKIQELEDEAERLRQMTEQGATGNGDATASDHESVEMTPEQQAAQSQEQDRRSI 118
Query: 71 FVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNE 118
+VGN +HF+SCG++ R+TI DK+ G PKG+AY+EF AVQ AL LN+
Sbjct: 119 YVGNVDYGSAPEELQEHFKSCGSIQRITIMVDKYSGHPKGFAYIEFGDEAAVQNALLLND 178
Query: 119 SELHGRQLKVTVKRTNVPG 137
+ GRQLKV KRTN+PG
Sbjct: 179 TMFRGRQLKVLQKRTNLPG 197
>gi|361128100|gb|EHL00053.1| putative E3 ubiquitin-protein ligase hulA [Glarea lozoyensis 74030]
Length = 1411
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 69/123 (56%), Gaps = 21/123 (17%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN------ 74
MK R+ EMEEEA LR+M A + + D +E++DSRS+FVGN
Sbjct: 652 MKRRVAEMEEEAAKLREMQATMEQQHQDLDD---------KKEDIDSRSIFVGNVDYEAS 702
Query: 75 -----QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
HF +CG +NRVTI DKF G PKGYAYVEF + V +AL LNES GR LK
Sbjct: 703 PEEIQAHFTTCGPINRVTILLDKFTGHPKGYAYVEFTEPNLVAQALVLNESVFRGRNLKA 762
Query: 129 TVK 131
+
Sbjct: 763 VAE 765
>gi|147899481|ref|NP_001084418.1| embryonic polyadenylate-binding protein 2-B [Xenopus laevis]
gi|82238228|sp|Q6TY21.1|EPA2B_XENLA RecName: Full=Embryonic polyadenylate-binding protein 2-B;
Short=Embryonic poly(A)-binding protein 2-B;
Short=XePABP2-B; Short=ePABP-2B; Short=ePABP2-B;
AltName: Full=Embryonic poly(A)-binding protein type
II-B
gi|38641399|gb|AAR26263.1| embryonic poly(A) binding protein 2 [Xenopus laevis]
Length = 218
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 88/158 (55%), Gaps = 33/158 (20%)
Query: 14 KQVELDD-----MKIRLKEMEEEATALRQMHAK---VGNE----MASKQDPAAGGS---- 57
++ ELDD +++R++EMEEEA L+ + + +G M + G+
Sbjct: 18 EECELDDPELKAIRMRVREMEEEAERLKGLSGQDKSIGVSTRPCMQTTHSKMTAGAYTEG 77
Query: 58 -----SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYA 100
S ++E+D RSV+VGN HF SCG++NR+TI DKF G PKGYA
Sbjct: 78 PPQPLSAEEKKEIDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYA 137
Query: 101 YVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
Y+EF + +V A+ ++E+ GR +KV KRTN+PG+
Sbjct: 138 YIEFAERNSVDAAVAMDETVFRGRTIKVLPKRTNMPGI 175
>gi|351697106|gb|EHB00025.1| Polyadenylate-binding protein 2, partial [Heterocephalus glaber]
Length = 189
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 100/192 (52%), Gaps = 27/192 (14%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G S+ R E D+RS++VG
Sbjct: 1 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEERMEADARSIYVG 60
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+ES
Sbjct: 61 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 120
Query: 122 HGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKI 172
GRQ+KV KRTN PG+ ++R R N SR F P G
Sbjct: 121 RGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRSRFYSGFNSRPRGRVYR 177
Query: 173 PRFRMPMRYSPY 184
R R YSPY
Sbjct: 178 GRARATSWYSPY 189
>gi|213626875|gb|AAI70309.1| Embryonic poly(A) binding protein 2 [Xenopus laevis]
Length = 218
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 88/158 (55%), Gaps = 33/158 (20%)
Query: 14 KQVELDD-----MKIRLKEMEEEATALRQMHAK---VGNE----MASKQDPAAGGS---- 57
++ ELDD +++R++EMEEEA L+ + + +G M + G+
Sbjct: 18 EECELDDPELKAIRMRVREMEEEAERLKGLSGQDKSIGVSTRPCMQTTHSKMTAGAYTEG 77
Query: 58 -----SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYA 100
S ++E+D RSV+VGN HF SCG++NR+TI DKF G PKGYA
Sbjct: 78 PPQPLSAEEKKEIDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYA 137
Query: 101 YVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
Y+EF + +V A+ ++E+ GR +KV KRTN+PG+
Sbjct: 138 YIEFAERNSVDAAVAMDETVFRGRTIKVLPKRTNMPGI 175
>gi|213623852|gb|AAI70311.1| LOC403372 protein [Xenopus laevis]
Length = 218
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 88/158 (55%), Gaps = 33/158 (20%)
Query: 14 KQVELDD-----MKIRLKEMEEEATALRQMHAK---VGNE----MASKQDPAAGGS---- 57
++ ELDD +++R++EMEEEA L+ + + +G M + G+
Sbjct: 18 EECELDDPELKAIRMRVREMEEEAERLKGLSGQDKSIGVSTRPCMQTTHSKMTAGAYTEG 77
Query: 58 -----SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYA 100
S ++E+D RSV+VGN HF SCG++NR+TI DKF G PKGYA
Sbjct: 78 PPQTLSAEEKKEIDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYA 137
Query: 101 YVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
Y+EF + +V A+ ++E+ GR +KV KRTN+PG+
Sbjct: 138 YIEFAERNSVDAAVAMDETVFRGRTIKVLPKRTNMPGI 175
>gi|348577533|ref|XP_003474538.1| PREDICTED: polyadenylate-binding protein 2-like [Cavia porcellus]
Length = 306
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 100/192 (52%), Gaps = 27/192 (14%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G S+ R E D+RS++VG
Sbjct: 118 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEERMEADARSIYVG 177
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+ES
Sbjct: 178 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 237
Query: 122 HGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKI 172
GRQ+KV KRTN PG+ ++R R N SR F P G
Sbjct: 238 RGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRSRFYSGFNSRPRGRVYR 294
Query: 173 PRFRMPMRYSPY 184
R R YSPY
Sbjct: 295 GRARATSWYSPY 306
>gi|149063931|gb|EDM14201.1| poly(A) binding protein, nuclear 1, isoform CRA_c [Rattus
norvegicus]
Length = 194
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 100/192 (52%), Gaps = 27/192 (14%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G SL + E D+RS++VG
Sbjct: 6 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIYVG 65
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+ES
Sbjct: 66 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 125
Query: 122 HGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKI 172
GRQ+KV KRTN PG+ ++R R N SR F P G
Sbjct: 126 RGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRSRFYSGFNSRPRGRIYR 182
Query: 173 PRFRMPMRYSPY 184
R R YSPY
Sbjct: 183 GRARATSWYSPY 194
>gi|354488039|ref|XP_003506178.1| PREDICTED: polyadenylate-binding protein 2-like [Cricetulus
griseus]
Length = 333
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 100/192 (52%), Gaps = 27/192 (14%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G SL + E D+RS++VG
Sbjct: 145 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIYVG 204
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+ES
Sbjct: 205 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 264
Query: 122 HGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKI 172
GRQ+KV KRTN PG+ ++R R N SR F P G
Sbjct: 265 RGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRSRFYSGFNSRPRGRVYR 321
Query: 173 PRFRMPMRYSPY 184
R R YSPY
Sbjct: 322 GRARATSWYSPY 333
>gi|260797827|ref|XP_002593902.1| hypothetical protein BRAFLDRAFT_61143 [Branchiostoma floridae]
gi|229279134|gb|EEN49913.1| hypothetical protein BRAFLDRAFT_61143 [Branchiostoma floridae]
Length = 166
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 76/130 (58%), Gaps = 19/130 (14%)
Query: 28 MEEEATALRQMHAKVGNEMA---SKQDPAAGGS----SLANREEVDSRSVFVGN------ 74
MEEEA L++M +V +M + Q P A S+ ++ E D RSV+VGN
Sbjct: 1 MEEEAEKLKEMQNEVERQMNLSPTAQRPGATAGVAFPSIEDKMEADGRSVYVGNVDYGAT 60
Query: 75 -----QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
HF CG++NRVTI DKF G PKG+AY+EF ++++ A L++S GRQ+KV
Sbjct: 61 AEELEAHFHGCGSINRVTILCDKFTGHPKGFAYIEFADKDSIETAKALDDSLFRGRQIKV 120
Query: 129 TVKRTNVPGM 138
KRTN PG+
Sbjct: 121 VPKRTNRPGV 130
>gi|389747069|gb|EIM88248.1| hypothetical protein STEHIDRAFT_155598 [Stereum hirsutum FP-91666
SS1]
Length = 457
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 79/136 (58%), Gaps = 17/136 (12%)
Query: 7 DMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA---NRE 63
D E E+K++ L MK R++EME EA LR++ A + S + G+ + ++
Sbjct: 21 DSEEAESKEIML--MKQRVEEMEREAMKLRELQAAAESADGSSGREGSAGAPMEGDDDKA 78
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 111
+ DSRS++VGN HFQ+ GT+NRVTI DKF G PKGYAYVEF + E V
Sbjct: 79 QADSRSIYVGNVDYAATPEDIQAHFQAAGTINRVTILCDKFTGHPKGYAYVEFAEPEHVD 138
Query: 112 EALHLNESELHGRQLK 127
AL L+ S HGR +K
Sbjct: 139 AALALDNSLFHGRLIK 154
>gi|336386223|gb|EGO27369.1| hypothetical protein SERLADRAFT_446592 [Serpula lacrymans var.
lacrymans S7.9]
Length = 338
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 76/135 (56%), Gaps = 17/135 (12%)
Query: 10 ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE---VD 66
E E+K+++L MK R++EME EA LR++ A + G + EE D
Sbjct: 24 EAESKEIQL--MKQRVEEMEREAKKLRELQAAAETANGGTSTESDSGVPMETEEEKALSD 81
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL 114
SRSVFVGN HFQ+CGT+NRVTI DKF G PKGYAYVEF + + + AL
Sbjct: 82 SRSVFVGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPDFIDAAL 141
Query: 115 HLNESELHGRQLKVT 129
++ S GR +K +
Sbjct: 142 AMDNSLFRGRLIKTS 156
>gi|388582273|gb|EIM22578.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 202
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 81/161 (50%), Gaps = 39/161 (24%)
Query: 9 IETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA-------- 60
E +++ E+ MK R+K+MEEEA LR++ V +Q P
Sbjct: 17 FEEDDEDKEIAAMKERVKQMEEEAARLREVQENV------EQKPEEDQQQQPQQLESQEQ 70
Query: 61 -------------NREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQ 95
+ E+VD RSV+VGN +HF +CGT+NRVTI DKF G
Sbjct: 71 STFEGQDAEMMQESSEDVDGRSVYVGNVDYSATPEDLQKHFAACGTINRVTILCDKFTGH 130
Query: 96 PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVP 136
PKGYAY+EF + V+ A LNES GR +KV KR NVP
Sbjct: 131 PKGYAYIEFAEPSLVENASALNESLFKGRLIKVVAKRKNVP 171
>gi|431907175|gb|ELK11241.1| Polyadenylate-binding protein 2 [Pteropus alecto]
Length = 208
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 101/194 (52%), Gaps = 27/194 (13%)
Query: 15 QVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVF 71
+ EL+ +K R++EMEEEA L+++ +V +M P G S+ + E D+RS++
Sbjct: 18 ESELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIY 77
Query: 72 VGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNES 119
VGN HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+ES
Sbjct: 78 VGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDES 137
Query: 120 ELHGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRGAIIPPFLYSPYGYG 170
GRQ+KV KRTN PG+ ++R R N SR F P G
Sbjct: 138 LFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRSRFYSGFNSRPRGRV 194
Query: 171 KIPRFRMPMRYSPY 184
R R YSPY
Sbjct: 195 YRGRARATSWYSPY 208
>gi|17505625|ref|NP_492504.1| Protein PABP-2 [Caenorhabditis elegans]
gi|3874370|emb|CAB02750.1| Protein PABP-2 [Caenorhabditis elegans]
Length = 205
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 89/156 (57%), Gaps = 19/156 (12%)
Query: 1 MEGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA 60
M GDD D+ E E+++ + +LK ++ E M + +S+ + + +
Sbjct: 17 MTGDDADLSAIEGDLNEIEEEQKKLKAIQNE------MVGHMNLNTSSQSNSSQSLLTPE 70
Query: 61 NREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSE 108
+ E D++SV+VGN QHF CG+V+RVTI+ D+F G PKG+AYVEF + E
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKE 130
Query: 109 AVQEALHLNESELHGRQLKVTVKRTNVPGMK-QHRP 143
+Q AL + +S L GRQ+KV KRTN PGM +RP
Sbjct: 131 GMQNALAMTDSLLRGRQIKVDPKRTNKPGMSTTNRP 166
>gi|148227694|ref|NP_001082505.1| embryonic polyadenylate-binding protein 2-A [Xenopus laevis]
gi|82241899|sp|Q804A5.1|EPA2A_XENLA RecName: Full=Embryonic polyadenylate-binding protein 2-A;
Short=Embryonic poly(A)-binding protein 2-A;
Short=XePABP2-A; Short=ePABP-2A; Short=ePABP2-A;
AltName: Full=Embryonic poly(A)-binding protein type
II-A; AltName: Full=PABPN2; AltName: Full=p32
gi|28273596|gb|AAO33927.1| putative polyA-binding protein PABPN2/ePABP2 [Xenopus laevis]
Length = 218
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 85/166 (51%), Gaps = 46/166 (27%)
Query: 10 ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS------------ 57
E E EL +++R++EMEEEA L+ + S QD + G S
Sbjct: 19 ECELDDPELKAIRMRVREMEEEAERLKGL---------SGQDKSIGVSPRPCMKLIHSKM 69
Query: 58 -------------SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF 93
S ++E+D RSV+VGN HF SCG++NR+TI DKF
Sbjct: 70 TAGEYTEGPPRPLSAEEKKEIDKRSVYVGNVDYGGTAQDLEAHFSSCGSINRITILCDKF 129
Query: 94 -GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
G PKGYAY+EF + +V A+ ++E+ GR +KV KRTN+PG+
Sbjct: 130 SGHPKGYAYIEFAERNSVDAAVTMDETVFRGRTIKVLPKRTNMPGI 175
>gi|291190353|ref|NP_001167243.1| Polyadenylate-binding protein 2 [Salmo salar]
gi|223648842|gb|ACN11179.1| Polyadenylate-binding protein 2 [Salmo salar]
Length = 237
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 93/158 (58%), Gaps = 15/158 (9%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGG-SSLANREEVDSRSVFVGN- 74
EL+ +K R++EMEEEA L+++ +V +M PA S+ + E D+RS++VGN
Sbjct: 50 ELEAIKARVREMEEEAEKLKELQNEVEKQMNLSPPPAGPVIMSIEEKMEADARSIYVGNV 109
Query: 75 ----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHG 123
HF CG+VNRVTI DKF G PKG+AY+EF E+V+ A+ L+ES G
Sbjct: 110 DYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFSDKESVRTAMALDESLFRG 169
Query: 124 RQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPP 161
RQ+KV VKRTN PG+ R P ++SRG P
Sbjct: 170 RQIKVGVKRTNRPGISTT--DRGFPRARFRSRGGNFNP 205
>gi|315434255|ref|NP_001186793.1| BCL2L2-PABPN1 protein [Homo sapiens]
gi|332223067|ref|XP_003260692.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Nomascus
leucogenys]
gi|338717165|ref|XP_003363601.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Equus
caballus]
gi|397473278|ref|XP_003808142.1| PREDICTED: polyadenylate-binding protein 2 [Pan paniscus]
gi|403264162|ref|XP_003924360.1| PREDICTED: polyadenylate-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410961928|ref|XP_003987530.1| PREDICTED: polyadenylate-binding protein 2 isoform 3 [Felis catus]
gi|426232740|ref|XP_004010379.1| PREDICTED: polyadenylate-binding protein 2 [Ovis aries]
gi|410267786|gb|JAA21859.1| BCL2L2-PABPN1 readthrough [Pan troglodytes]
gi|417399112|gb|JAA46586.1| Putative splicing factor rnps1 sr protein superfamily [Desmodus
rotundus]
Length = 333
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 100/192 (52%), Gaps = 27/192 (14%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G S+ + E D+RS++VG
Sbjct: 145 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVG 204
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+ES
Sbjct: 205 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 264
Query: 122 HGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKI 172
GRQ+KV KRTN PG+ ++R R N SR F P G
Sbjct: 265 RGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRSRFYSGFNSRPRGRVYR 321
Query: 173 PRFRMPMRYSPY 184
R R YSPY
Sbjct: 322 GRARATSWYSPY 333
>gi|201860272|ref|NP_001128480.1| polyadenylate-binding protein 2 [Rattus norvegicus]
gi|149063929|gb|EDM14199.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Rattus
norvegicus]
Length = 302
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 100/192 (52%), Gaps = 27/192 (14%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G SL + E D+RS++VG
Sbjct: 114 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIYVG 173
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+ES
Sbjct: 174 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 233
Query: 122 HGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKI 172
GRQ+KV KRTN PG+ ++R R N SR F P G
Sbjct: 234 RGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRSRFYSGFNSRPRGRIYR 290
Query: 173 PRFRMPMRYSPY 184
R R YSPY
Sbjct: 291 GRARATSWYSPY 302
>gi|9506945|ref|NP_062275.1| polyadenylate-binding protein 2 [Mus musculus]
gi|46396417|sp|Q8CCS6.3|PABP2_MOUSE RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2351846|gb|AAC00210.1| poly(A) binding protein II [Mus musculus]
gi|33585929|gb|AAH55866.1| Poly(A) binding protein, nuclear 1 [Mus musculus]
gi|148704376|gb|EDL36323.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Mus musculus]
Length = 302
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 100/192 (52%), Gaps = 27/192 (14%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G SL + E D+RS++VG
Sbjct: 114 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIYVG 173
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+ES
Sbjct: 174 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 233
Query: 122 HGRQLKVTVKRTNVPGM---------KQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKI 172
GRQ+KV KRTN PG+ ++R R N SR F P G
Sbjct: 234 RGRQIKVIPKRTNRPGISTTDRGFPRSRYRARTTN---YNSSRSRFYSGFNSRPRGRIYR 290
Query: 173 PRFRMPMRYSPY 184
R R YSPY
Sbjct: 291 GRARATSWYSPY 302
>gi|378729234|gb|EHY55693.1| apoptosis regulator BCL-W [Exophiala dermatitidis NIH/UT8656]
Length = 206
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 74/128 (57%), Gaps = 21/128 (16%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN------ 74
MK R+ EME EA LR EM S+ + + G +RE+VD+RS+FVGN
Sbjct: 28 MKRRVAEMESEAAKLR--------EMQSQLEQQSEGGRREDREDVDARSIFVGNVDYGAT 79
Query: 75 -----QHFQSC-GTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLK 127
HF S G++NRVTI DKF G PKGYAYVEF V +AL LNES GR LK
Sbjct: 80 PEEIQAHFASGPGSINRVTILLDKFTGHPKGYAYVEFSDPALVAQALVLNESVFRGRNLK 139
Query: 128 VTVKRTNV 135
V KRTN+
Sbjct: 140 VVPKRTNL 147
>gi|440893202|gb|ELR46056.1| Polyadenylate-binding protein 2, partial [Bos grunniens mutus]
Length = 189
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 100/192 (52%), Gaps = 27/192 (14%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G S+ + E D+RS++VG
Sbjct: 1 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVG 60
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+ES
Sbjct: 61 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 120
Query: 122 HGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKI 172
GRQ+KV KRTN PG+ ++R R N SR F P G
Sbjct: 121 RGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRSRFYSGFNSRPRGRVYR 177
Query: 173 PRFRMPMRYSPY 184
R R YSPY
Sbjct: 178 GRARATSWYSPY 189
>gi|27807029|ref|NP_776994.1| polyadenylate-binding protein 2 [Bos taurus]
gi|46396285|sp|Q28165.3|PABP2_BOVIN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|1051125|emb|CAA62006.1| polyA binding protein II [Bos taurus]
gi|126920947|gb|AAI33559.1| Poly(A) binding protein, nuclear 1 [Bos taurus]
gi|296483592|tpg|DAA25707.1| TPA: polyadenylate-binding protein 2 [Bos taurus]
Length = 306
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 100/192 (52%), Gaps = 27/192 (14%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G S+ + E D+RS++VG
Sbjct: 118 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVG 177
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+ES
Sbjct: 178 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 237
Query: 122 HGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKI 172
GRQ+KV KRTN PG+ ++R R N SR F P G
Sbjct: 238 RGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRSRFYSGFNSRPRGRVYR 294
Query: 173 PRFRMPMRYSPY 184
R R YSPY
Sbjct: 295 GRARATSWYSPY 306
>gi|380800735|gb|AFE72243.1| polyadenylate-binding protein 2, partial [Macaca mulatta]
Length = 273
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 107/209 (51%), Gaps = 32/209 (15%)
Query: 1 MEGDDMD-MIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS-- 57
+EGD D IE EL+ +K R++EMEEEA L+++ +V +M P G
Sbjct: 72 VEGDPGDGAIE----DPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVI 127
Query: 58 -SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEF 104
S+ + E D+RS++VGN HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 128 MSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEF 187
Query: 105 LQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSR 155
E+V+ +L L+ES GRQ+KV KRTN PG+ ++R R N SR
Sbjct: 188 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSR 244
Query: 156 GAIIPPFLYSPYGYGKIPRFRMPMRYSPY 184
F P G R R YSPY
Sbjct: 245 SRFYSGFNSRPRGRVYRGRARATSWYSPY 273
>gi|327287898|ref|XP_003228665.1| PREDICTED: polyadenylate-binding protein 2-like [Anolis
carolinensis]
Length = 196
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 94/160 (58%), Gaps = 17/160 (10%)
Query: 13 NKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRS 69
+++ EL+ +K R++EMEEEA L+++ +V +M P G SL + E D+RS
Sbjct: 3 SRRQELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARS 62
Query: 70 VFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLN 117
++VGN HF CG+VNRVTI DK+ G PKG+AY+EF E+V+ +L L+
Sbjct: 63 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSDKESVRTSLALD 122
Query: 118 ESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGA 157
ES GRQ+KV KRTN PG+ R P Y+ RG+
Sbjct: 123 ESLFRGRQIKVIPKRTNRPGISTT--DRGFPRTRYRGRGS 160
>gi|126010727|gb|AAI33552.1| PABPN1 protein [Bos taurus]
Length = 275
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 100/192 (52%), Gaps = 27/192 (14%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G S+ + E D+RS++VG
Sbjct: 87 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVG 146
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+ES
Sbjct: 147 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 206
Query: 122 HGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKI 172
GRQ+KV KRTN PG+ ++R R N SR F P G
Sbjct: 207 RGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRSRFYSGFNSRPRGRVYR 263
Query: 173 PRFRMPMRYSPY 184
R R YSPY
Sbjct: 264 GRARATSWYSPY 275
>gi|4758876|ref|NP_004634.1| polyadenylate-binding protein 2 [Homo sapiens]
gi|343780920|ref|NP_001230477.1| polyadenylate-binding protein 2 [Sus scrofa]
gi|360039231|ref|NP_001123909.2| polyadenylate-binding protein 2 [Canis lupus familiaris]
gi|114652132|ref|XP_001162168.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pan
troglodytes]
gi|296214561|ref|XP_002753680.1| PREDICTED: polyadenylate-binding protein 2 isoform 2 [Callithrix
jacchus]
gi|395859297|ref|XP_003801976.1| PREDICTED: polyadenylate-binding protein 2 [Otolemur garnettii]
gi|402875708|ref|XP_003901638.1| PREDICTED: polyadenylate-binding protein 2 [Papio anubis]
gi|426376431|ref|XP_004055004.1| PREDICTED: polyadenylate-binding protein 2 [Gorilla gorilla
gorilla]
gi|46403176|sp|Q86U42.3|PABP2_HUMAN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2895276|gb|AAC39596.1| poly(A) binding protein II [Homo sapiens]
gi|15012075|gb|AAH10939.1| Poly(A) binding protein, nuclear 1 [Homo sapiens]
gi|119586571|gb|EAW66167.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|119586572|gb|EAW66168.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|387539310|gb|AFJ70282.1| polyadenylate-binding protein 2 [Macaca mulatta]
Length = 306
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 100/192 (52%), Gaps = 27/192 (14%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G S+ + E D+RS++VG
Sbjct: 118 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVG 177
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+ES
Sbjct: 178 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 237
Query: 122 HGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKI 172
GRQ+KV KRTN PG+ ++R R N SR F P G
Sbjct: 238 RGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRSRFYSGFNSRPRGRVYR 294
Query: 173 PRFRMPMRYSPY 184
R R YSPY
Sbjct: 295 GRARATSWYSPY 306
>gi|126140476|ref|XP_001386760.1| hypothetical protein PICST_50467 [Scheffersomyces stipitis CBS
6054]
gi|126094044|gb|ABN68731.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 217
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 79/132 (59%), Gaps = 24/132 (18%)
Query: 24 RLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE----VDSRSVFVGN----- 74
RLKEME EA LR++H+++ + GG + +E +DSRSV++GN
Sbjct: 48 RLKEMEREADRLRELHSQLDEQQK-------GGDGIPQTDEEKRDIDSRSVYIGNVDYGS 100
Query: 75 ------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL-HLNESELHGRQL 126
QHF S G V RVTI T+KF GQPKG+AY+EF + V +A+ L+ + R+L
Sbjct: 101 TPLELQQHFSSAGIVKRVTILTNKFTGQPKGFAYLEFDDVDGVNKAVATLDGTVFRDREL 160
Query: 127 KVTVKRTNVPGM 138
KV+ KRTN+PG+
Sbjct: 161 KVSAKRTNIPGL 172
>gi|290984354|ref|XP_002674892.1| predicted protein [Naegleria gruberi]
gi|284088485|gb|EFC42148.1| predicted protein [Naegleria gruberi]
Length = 155
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 73/122 (59%), Gaps = 20/122 (16%)
Query: 28 MEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-----------QH 76
M+EE +++M +++ +++ + N+EE+DSRS++VGN H
Sbjct: 1 MQEEHAKIKEMQSEIERNLSTVAE---------NQEEIDSRSIYVGNVDYGSVAEELENH 51
Query: 77 FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVP 136
F+ G + R+TI++DK G PKG+AY+EF +V+ AL LN S R+LKV KRTN+P
Sbjct: 52 FKQAGDIIRITIKSDKMGNPKGFAYIEFKDKSSVENALQLNGSTFRNRELKVFAKRTNIP 111
Query: 137 GM 138
G+
Sbjct: 112 GL 113
>gi|149063930|gb|EDM14200.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Rattus
norvegicus]
Length = 184
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 84/137 (61%), Gaps = 15/137 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G SL + E D+RS++VG
Sbjct: 6 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIYVG 65
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+ES
Sbjct: 66 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 125
Query: 122 HGRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 126 RGRQIKVIPKRTNRPGI 142
>gi|26328001|dbj|BAC27741.1| unnamed protein product [Mus musculus]
Length = 292
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 84/137 (61%), Gaps = 15/137 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G SL + E D+RS++VG
Sbjct: 114 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIYVG 173
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+ES
Sbjct: 174 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 233
Query: 122 HGRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 234 RGRQIKVIPKRTNRPGI 250
>gi|148232022|ref|NP_001082057.1| polyadenylate-binding protein 2-A [Xenopus laevis]
gi|82247012|sp|Q9DDY9.1|PAB2A_XENLA RecName: Full=Polyadenylate-binding protein 2-A; Short=PABP-2-A;
Short=Poly(A)-binding protein 2-A; AltName: Full=Nuclear
poly(A)-binding protein 1-A; AltName:
Full=Poly(A)-binding protein II-A; Short=PABII-A;
AltName: Full=Polyadenylate-binding nuclear protein 1-A;
AltName: Full=XLnPABP2-A; AltName: Full=nPABP2-A;
AltName: Full=xPABPII-A
gi|11527140|gb|AAG36902.1|AF257236_1 poly(A) binding protein II [Xenopus laevis]
gi|38641397|gb|AAR26262.1| nuclear poly(A) binding protein 2 [Xenopus laevis]
gi|49257355|gb|AAH73657.1| PABPII protein [Xenopus laevis]
Length = 296
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 84/137 (61%), Gaps = 15/137 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G S+ + E D+RS++VG
Sbjct: 109 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSVEEKMEADARSIYVG 168
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+ES
Sbjct: 169 NVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFCDKESVRTSLALDESLF 228
Query: 122 HGRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 229 RGRQIKVVPKRTNRPGI 245
>gi|237843899|ref|XP_002371247.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|211968911|gb|EEB04107.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|221504196|gb|EEE29871.1| hypothetical protein TGVEG_008880 [Toxoplasma gondii VEG]
Length = 268
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 62/96 (64%), Gaps = 12/96 (12%)
Query: 55 GGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYV 102
GG A+ +EVD RSV+VGN +HF+SCGT+NR+TI DK+ G PKGYAY+
Sbjct: 126 GGFPSADSDEVDRRSVYVGNVDYSSTPAELQEHFKSCGTINRITIMVDKYTGHPKGYAYI 185
Query: 103 EFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
EF AVQ A+ L+++ RQ+KV KR N+PG
Sbjct: 186 EFNSEAAVQNAILLSDTVFKQRQIKVVAKRKNIPGF 221
>gi|294933484|ref|XP_002780736.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239890777|gb|EER12531.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 226
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 80/144 (55%), Gaps = 35/144 (24%)
Query: 20 DMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEV-------------- 65
+M+ +++E+E+EA LRQM ++Q G +++ E V
Sbjct: 48 EMQHKIQELEDEAERLRQM---------TEQGATGDGDGVSDHENVEMTAEQQAAQSPEQ 98
Query: 66 DSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEA 113
D RSV+VG+ +HF+SCG + R+TI DK+ G PKG+AY+EF AVQ A
Sbjct: 99 DKRSVYVGSVDYGAAPEELQEHFKSCGPIQRITIMVDKYSGHPKGFAYIEFGDEAAVQNA 158
Query: 114 LHLNESELHGRQLKVTVKRTNVPG 137
L LN++ GRQLKV KRTN+PG
Sbjct: 159 LLLNDTMFRGRQLKVLQKRTNLPG 182
>gi|148704375|gb|EDL36322.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Mus musculus]
Length = 294
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 84/137 (61%), Gaps = 15/137 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G SL + E D+RS++VG
Sbjct: 116 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIYVG 175
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+ES
Sbjct: 176 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 235
Query: 122 HGRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 236 RGRQIKVIPKRTNRPGI 252
>gi|221483800|gb|EEE22112.1| RNA-binding protein, putative [Toxoplasma gondii GT1]
Length = 268
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 62/96 (64%), Gaps = 12/96 (12%)
Query: 55 GGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYV 102
GG A+ +EVD RSV+VGN +HF+SCGT+NR+TI DK+ G PKGYAY+
Sbjct: 126 GGFPSADSDEVDRRSVYVGNVDYSSTPAELQEHFKSCGTINRITIMVDKYTGHPKGYAYI 185
Query: 103 EFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
EF AVQ A+ L+++ RQ+KV KR N+PG
Sbjct: 186 EFNSEAAVQNAILLSDTVFKQRQIKVVAKRKNIPGF 221
>gi|297297505|ref|XP_001107287.2| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Macaca
mulatta]
Length = 355
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 87/150 (58%), Gaps = 15/150 (10%)
Query: 5 DMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLAN 61
D D + EL+ +K R++EMEEEA L+++ +V +M P G S+
Sbjct: 165 DCDSAPSSPDLEELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEE 224
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 109
+ E D+RS++VGN HF CG+VNRVTI DKF G PKG+AY+EF E+
Sbjct: 225 KMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKES 284
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGMK 139
V+ +L L+ES GRQ+KV KRTN PG+
Sbjct: 285 VRTSLALDESLFRGRQIKVIPKRTNRPGIS 314
>gi|157311739|ref|NP_001098602.1| polyadenylate-binding protein nuclear 1 isoform 2 [Danio rerio]
gi|166158019|ref|NP_001107419.1| uncharacterized protein LOC100135259 [Xenopus (Silurana)
tropicalis]
gi|156914711|gb|AAI52624.1| Pabpn1 protein [Danio rerio]
gi|158253845|gb|AAI54029.1| Poly(A) binding protein, nuclear 1 [Danio rerio]
gi|163915712|gb|AAI57544.1| LOC100135259 protein [Xenopus (Silurana) tropicalis]
Length = 232
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 94/165 (56%), Gaps = 15/165 (9%)
Query: 6 MDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGG-SSLANREE 64
+D E + EL+ +K R++EMEEEA L+++ +V +M PA S+ + E
Sbjct: 35 LDEGEAAIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNLSPPPAGPVIMSIEEKIE 94
Query: 65 VDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQE 112
D RS++VGN HF CG+VNRVTI DKF G PKG+AY+EF E+V+
Sbjct: 95 ADGRSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFADKESVRT 154
Query: 113 ALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGA 157
A+ L+ES GRQ+KV KRTN PG+ R P ++SRG
Sbjct: 155 AMALDESLFRGRQIKVGAKRTNRPGISTT--DRGFPRARFRSRGG 197
>gi|47086087|ref|NP_998424.1| polyadenylate-binding protein nuclear 1 isoform 1 [Danio rerio]
gi|46250394|gb|AAH68437.1| Zgc:85979 [Danio rerio]
gi|50925993|gb|AAH79522.1| Pabpn1 protein [Danio rerio]
gi|182889100|gb|AAI64644.1| Pabpn1 protein [Danio rerio]
Length = 284
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 94/165 (56%), Gaps = 15/165 (9%)
Query: 6 MDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGG-SSLANREE 64
+D E + EL+ +K R++EMEEEA L+++ +V +M PA S+ + E
Sbjct: 35 LDEGEAAIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNLSPPPAGPVIMSIEEKIE 94
Query: 65 VDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQE 112
D RS++VGN HF CG+VNRVTI DKF G PKG+AY+EF E+V+
Sbjct: 95 ADGRSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFADKESVRT 154
Query: 113 ALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGA 157
A+ L+ES GRQ+KV KRTN PG+ R P ++SRG
Sbjct: 155 AMALDESLFRGRQIKVGAKRTNRPGIST--TDRGFPRARFRSRGG 197
>gi|196012776|ref|XP_002116250.1| hypothetical protein TRIADDRAFT_30657 [Trichoplax adhaerens]
gi|190581205|gb|EDV21283.1| hypothetical protein TRIADDRAFT_30657 [Trichoplax adhaerens]
Length = 139
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 61/92 (66%), Gaps = 12/92 (13%)
Query: 61 NREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSE 108
+R E D+RSV+VGN QHF CG+VNRVTI DKF G PKG+AY+EF E
Sbjct: 4 DRAEADARSVYVGNVDYAATAEELEQHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKE 63
Query: 109 AVQEALHLNESELHGRQLKVTVKRTNVPGMKQ 140
+V+ A+ L++S GRQ+KV+ KRTN PG+
Sbjct: 64 SVKTAMALDDSLFRGRQIKVSPKRTNRPGVSS 95
>gi|147907300|ref|NP_001080719.1| polyadenylate-binding protein 2-B [Xenopus laevis]
gi|82241535|sp|Q7ZXB8.1|PAB2B_XENLA RecName: Full=Polyadenylate-binding protein 2-B; Short=PABP-2-B;
Short=Poly(A)-binding protein 2-B; AltName: Full=Nuclear
poly(A)-binding protein 1-B; AltName:
Full=Poly(A)-binding protein II-B; Short=PABII-B;
AltName: Full=Polyadenylate-binding nuclear protein 1-B;
AltName: Full=XLnPABP2-B; AltName: Full=nPABP2-B;
AltName: Full=xPABPII-B
gi|27924235|gb|AAH45063.1| Pabpn1-prov protein [Xenopus laevis]
Length = 295
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 84/137 (61%), Gaps = 15/137 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G S+ + E D+RS++VG
Sbjct: 108 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSVEEKMEADARSIYVG 167
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+ES
Sbjct: 168 NVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFSDKESVRTSLALDESLF 227
Query: 122 HGRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 228 RGRQIKVVPKRTNRPGI 244
>gi|62858583|ref|NP_001016352.1| poly(A) binding protein, nuclear 1-like (cytoplasmic) [Xenopus
(Silurana) tropicalis]
gi|89266764|emb|CAJ81799.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
gi|111305754|gb|AAI21547.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
Length = 218
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 84/152 (55%), Gaps = 32/152 (21%)
Query: 17 ELDDMKIRLKEMEEEATALRQM------------------HAKVGNEMASKQDPAAGGSS 58
EL +++R++EMEEEA L+ + H+K+ ++ P S
Sbjct: 26 ELKAIRMRVREMEEEAERLKGLSGEDKSIGVSSRPCMKLIHSKMTAGAYTEGPPRP--LS 83
Query: 59 LANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQ 106
++E+D RSV+VGN HF SCG++NR+TI DKF G PKGYAY+EF +
Sbjct: 84 AEEKKEIDKRSVYVGNVDYGGTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAE 143
Query: 107 SEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
+V A+ ++E+ GR +KV KRTN+PG+
Sbjct: 144 RNSVDVAVAMDETVFRGRTIKVLPKRTNMPGI 175
>gi|417409281|gb|JAA51155.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 278
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 91/153 (59%), Gaps = 18/153 (11%)
Query: 1 MEGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS--- 57
+EGD D + + EL+ +K R++EMEEEA L+++ +V +M P G
Sbjct: 87 VEGDPGD---SAIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIM 143
Query: 58 SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 105
S+ + E D+RS++VGN HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 144 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 203
Query: 106 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
E+V+ +L L+ES GRQ+KV KRTN PG+
Sbjct: 204 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 236
>gi|297694743|ref|XP_002824624.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pongo abelii]
Length = 296
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 84/137 (61%), Gaps = 15/137 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G S+ + E D+RS++VG
Sbjct: 118 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVG 177
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+ES
Sbjct: 178 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 237
Query: 122 HGRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 238 RGRQIKVIPKRTNRPGI 254
>gi|444728816|gb|ELW69258.1| Bcl-2-like protein 2 [Tupaia chinensis]
Length = 367
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 85/138 (61%), Gaps = 15/138 (10%)
Query: 16 VELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFV 72
+EL+ +K R++EMEEEA L+++ +V +M P G S+ + E D+RS++V
Sbjct: 183 LELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYV 242
Query: 73 GN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESE 120
GN HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+ES
Sbjct: 243 GNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESL 302
Query: 121 LHGRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 303 FRGRQIKVIPKRTNRPGI 320
>gi|28193136|emb|CAD62310.1| unnamed protein product [Homo sapiens]
Length = 298
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 84/137 (61%), Gaps = 15/137 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G S+ + E D+RS++VG
Sbjct: 120 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVG 179
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+ES
Sbjct: 180 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 239
Query: 122 HGRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 240 RGRQIKVIPKRTNRPGI 256
>gi|417398942|gb|JAA46504.1| Putative splicing factor rnps1 sr protein superfamily [Desmodus
rotundus]
Length = 323
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 84/137 (61%), Gaps = 15/137 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G S+ + E D+RS++VG
Sbjct: 145 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVG 204
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+ES
Sbjct: 205 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 264
Query: 122 HGRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 265 RGRQIKVIPKRTNRPGI 281
>gi|126717485|gb|AAI33469.1| PABPN1 protein [Bos taurus]
Length = 296
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 84/137 (61%), Gaps = 15/137 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G S+ + E D+RS++VG
Sbjct: 118 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVG 177
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+ES
Sbjct: 178 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 237
Query: 122 HGRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 238 RGRQIKVIPKRTNRPGI 254
>gi|428671247|gb|EKX72165.1| conserved hypothetical protein [Babesia equi]
Length = 146
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 74/131 (56%), Gaps = 21/131 (16%)
Query: 25 LKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN---------- 74
+K ++EE +L+ M + +P A + E+VD RSV+VGN
Sbjct: 4 IKSLDEELMSLQGM---------TDANPGADDVDMEENEDVDKRSVYVGNVDYSTKPQEL 54
Query: 75 -QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKR 132
+ F+S G +NR+TI DK+ G PKGYAY+EF +AV A+ LNES R +KVT KR
Sbjct: 55 QEFFKSSGQINRITIMVDKWTGHPKGYAYIEFSSEDAVNNAVMLNESLFKERIIKVTPKR 114
Query: 133 TNVPGMKQHRP 143
N+PG+ + RP
Sbjct: 115 KNIPGLGRKRP 125
>gi|47213059|emb|CAF93812.1| unnamed protein product [Tetraodon nigroviridis]
Length = 220
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 67/112 (59%), Gaps = 14/112 (12%)
Query: 58 SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 105
S+ + E D+RS++VGN HF CG+VNRVTI DK+ G PKG+AY+EF
Sbjct: 88 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFA 147
Query: 106 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGA 157
E+V+ A+ L+ES GRQ+KV KRTN PG+ R P ++SRG
Sbjct: 148 DKESVRTAMALDESLFRGRQIKVVAKRTNRPGISTT--DRGFPRARFRSRGG 197
>gi|399217186|emb|CCF73873.1| unnamed protein product [Babesia microti strain RI]
Length = 145
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 64/95 (67%), Gaps = 12/95 (12%)
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQS 107
++++VD RSV+VGN ++F+SCG +NR+TI DK+ G PKGYAY+EF Q
Sbjct: 33 TSQDDVDRRSVYVGNVEYSATPQNLQEYFKSCGQINRITIMVDKWTGHPKGYAYIEFAQE 92
Query: 108 EAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHR 142
E+V+ AL LNE+ R +KVT KR N+PGM + +
Sbjct: 93 ESVENALLLNETLFKERLIKVTSKRKNIPGMSRSK 127
>gi|47575772|ref|NP_001001230.1| polyadenylate-binding protein 2 [Xenopus (Silurana) tropicalis]
gi|82237242|sp|Q6NVP7.1|PABP2_XENTR RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|45708904|gb|AAH67958.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
gi|89268254|emb|CAJ82538.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
Length = 296
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 84/137 (61%), Gaps = 15/137 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G S+ + E D+RS++VG
Sbjct: 109 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVG 168
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG+VNRVTI DK+ G PKG+AY+EF E+V+ +L L+ES
Sbjct: 169 NVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSDKESVRTSLALDESLF 228
Query: 122 HGRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 229 RGRQIKVVPKRTNRPGI 245
>gi|358056102|dbj|GAA97956.1| hypothetical protein E5Q_04636 [Mixia osmundae IAM 14324]
Length = 203
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 82/161 (50%), Gaps = 33/161 (20%)
Query: 11 TENKQVELDD----MKIRLKEMEEEATALRQMH-----------------AKVGNEMASK 49
+ N + E DD M+ RL+EME E + +M A+ A++
Sbjct: 2 SSNHEDEDDDGINAMRARLQEMEAERAKIMEMTKASHSAAPVAGSPAVAPAQTSQGQATE 61
Query: 50 QDPAAGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQ-PK 97
+ + RE +DSRS++VGN Q F+ CGT+NRVTI DKF + PK
Sbjct: 62 DETGDASMTEEEREAIDSRSIYVGNVDYGATPEELQQLFKDCGTINRVTILCDKFTRHPK 121
Query: 98 GYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
G+AYVEF + V A+ +NE+ GR + V KRTNVPGM
Sbjct: 122 GFAYVEFSEPTFVANAISMNETLFRGRMILVKAKRTNVPGM 162
>gi|401400261|ref|XP_003880750.1| hypothetical protein NCLIV_011840 [Neospora caninum Liverpool]
gi|325115161|emb|CBZ50717.1| hypothetical protein NCLIV_011840 [Neospora caninum Liverpool]
Length = 285
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 86/150 (57%), Gaps = 22/150 (14%)
Query: 10 ETENKQVELDDMKIRLKEMEEEAT-ALRQMHAKVGNEMASKQDPAA--GGS----SLANR 62
+ +N + D+++ +L+ M EEA +L Q A + A+ A GGS AN
Sbjct: 80 QVQNLDSDWDELQ-KLQYMTEEAAYSLVQSGASPHSAGAAGPTDGASPGGSQNVAGFANT 138
Query: 63 E--EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSE 108
+ EVD RSV+VGN +HF+SCGT+NR+TI DK+ G PKGYAY+EF
Sbjct: 139 DTDEVDRRSVYVGNVDYSSTPAELQEHFKSCGTINRITIMVDKYTGHPKGYAYIEFNSEA 198
Query: 109 AVQEALHLNESELHGRQLKVTVKRTNVPGM 138
AVQ A+ L+++ RQ+KV KR N+PG
Sbjct: 199 AVQNAILLSDTVFKQRQIKVVAKRKNIPGF 228
>gi|294878913|ref|XP_002768513.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239871063|gb|EER01231.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 196
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 84/160 (52%), Gaps = 45/160 (28%)
Query: 4 DDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE 63
DD D++E M+ +++E+E+EA LRQM ++Q G +++ E
Sbjct: 40 DDDDIME----------MQHKIQELEDEAERLRQM---------TEQGGTGDGDGVSDHE 80
Query: 64 EV--------------DSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPK 97
D RSV+VG+ +HF+SCG + R+TI DK+ G PK
Sbjct: 81 NAEMTAEQQAAQSQEQDKRSVYVGSVDYGAAPEELQEHFKSCGPIQRITIMVDKYSGHPK 140
Query: 98 GYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPG 137
G+AY+EF AVQ AL LN++ GRQLKV KRTN+PG
Sbjct: 141 GFAYIEFGDEAAVQNALLLNDTMFRGRQLKVLQKRTNLPG 180
>gi|50307397|ref|XP_453677.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642811|emb|CAH00773.1| KLLA0D13772p [Kluyveromyces lactis]
Length = 345
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 66/116 (56%), Gaps = 12/116 (10%)
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 111
E+DSRS+FVGN +HF+ CG V RVTI +K G PKGYAY+EF S+++
Sbjct: 99 ELDSRSIFVGNITTEATAETLEEHFKDCGEVVRVTILYNKLTGAPKGYAYIEFESSDSIP 158
Query: 112 EALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPY 167
+AL L +SELHG + V KRTNVPG ++ P VY + Y PY
Sbjct: 159 KALELKDSELHGETINVAKKRTNVPGYNNNKNYYPRKEWVYPGWQGNVMRQWYYPY 214
>gi|349803921|gb|AEQ17433.1| putative poly binding nuclear 1 [Hymenochirus curtipes]
Length = 255
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 85/137 (62%), Gaps = 15/137 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G S+ + E D+RS++VG
Sbjct: 80 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVG 139
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG+VNRVTI DK+ G PKG+AY+EF + E+V+ ++ L+ES
Sbjct: 140 NVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSEKESVRTSMALDESLF 199
Query: 122 HGRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 200 RGRQIKVGAKRTNKPGI 216
>gi|410908755|ref|XP_003967856.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Takifugu
rubripes]
Length = 232
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 66/112 (58%), Gaps = 14/112 (12%)
Query: 58 SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 105
S + E D+RS++VGN HF CG+VNRVTI DK+ G PKG+AY+EF
Sbjct: 88 SFEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFA 147
Query: 106 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGA 157
E+V+ A+ L+ES GRQ+KV KRTN PG+ R P ++SRG
Sbjct: 148 DKESVRTAMALDESLFRGRQIKVVAKRTNRPGISTT--DRGFPRARFRSRGG 197
>gi|345321135|ref|XP_003430388.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Ornithorhynchus anatinus]
Length = 338
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 99/195 (50%), Gaps = 30/195 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS------SLANREEVDSRSV 70
EL+ +K R++EMEEEA L+++ +V +M P G S+ + E D+RS+
Sbjct: 147 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNGEGVAPVIMSIEEKMEADARSI 206
Query: 71 FVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNE 118
+VGN HF CG+VNRVTI DKF G PKG+AY+EF E+V+ ++ L+E
Sbjct: 207 YVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSMALDE 266
Query: 119 SELHGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRGAIIPPFLYSPYGY 169
S GRQ+KV KRTN PG+ + R R N SR F P G
Sbjct: 267 SLFRGRQIKVIPKRTNRPGISTTDRGFPRARFRARATN---YSSSRARFYSGFNSRPRGR 323
Query: 170 GKIPRFRMPMRYSPY 184
R R YSPY
Sbjct: 324 VYRGRARATSWYSPY 338
>gi|299747315|ref|XP_002911154.1| polyadenylate-binding protein 2 [Coprinopsis cinerea okayama7#130]
gi|298407463|gb|EFI27660.1| polyadenylate-binding protein 2 [Coprinopsis cinerea okayama7#130]
Length = 194
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 15/137 (10%)
Query: 12 ENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVF 71
E+K++ L MK R++EME EA LR++ A S++ + + D+RS++
Sbjct: 24 EDKEIML--MKQRVEEMEREAKKLRELQAAAEASAGSEEP-EGEAGAEDEKAAADARSIY 80
Query: 72 VGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNES 119
VGN HFQ+CG +NRVTI DKF G PKGYAYVEF + E V A+ ++ S
Sbjct: 81 VGNVDYSATPEEIQAHFQACGVINRVTILCDKFTGHPKGYAYVEFAEPEHVDAAVAMDNS 140
Query: 120 ELHGRQLKVTVKRTNVP 136
GR LKVT KRTN+P
Sbjct: 141 LFKGRLLKVTAKRTNIP 157
>gi|301792821|ref|XP_002931377.1| PREDICTED: polyadenylate-binding protein 2-like [Ailuropoda
melanoleuca]
Length = 178
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 76/148 (51%), Gaps = 24/148 (16%)
Query: 58 SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 105
S+ + E D+RS++VGN HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 34 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 93
Query: 106 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRG 156
E+V+ +L L+ES GRQ+KV KRTN PG+ ++R R N SR
Sbjct: 94 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRS 150
Query: 157 AIIPPFLYSPYGYGKIPRFRMPMRYSPY 184
F P G R R YSPY
Sbjct: 151 RFYSGFNSRPRGRVYRGRARATSWYSPY 178
>gi|410908757|ref|XP_003967857.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Takifugu
rubripes]
Length = 284
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 66/112 (58%), Gaps = 14/112 (12%)
Query: 58 SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 105
S + E D+RS++VGN HF CG+VNRVTI DK+ G PKG+AY+EF
Sbjct: 88 SFEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFA 147
Query: 106 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGA 157
E+V+ A+ L+ES GRQ+KV KRTN PG+ R P ++SRG
Sbjct: 148 DKESVRTAMALDESLFRGRQIKVVAKRTNRPGISTT--DRGFPRARFRSRGG 197
>gi|348544129|ref|XP_003459534.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1
[Oreochromis niloticus]
Length = 232
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 66/112 (58%), Gaps = 14/112 (12%)
Query: 58 SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 105
S+ + E D RS++VGN HF CG+VNRVTI DK+ G PKG+AY+EF
Sbjct: 88 SIEEKMEADGRSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFA 147
Query: 106 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGA 157
E+V+ A+ L+ES GRQ+KV KRTN PG+ R P ++SRG
Sbjct: 148 DKESVRTAMALDESLFRGRQIKVGAKRTNRPGISTT--DRGFPRARFRSRGG 197
>gi|325087930|gb|EGC41240.1| RNP domain-containing protein [Ajellomyces capsulatus H88]
Length = 170
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 69/114 (60%), Gaps = 21/114 (18%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ MK R+ EME EA LR+M A + + S ++ ++E++D+RS+FVGN
Sbjct: 24 EIAAMKRRVAEMESEAAKLREMQASLDQQSESLRE---------DKEDIDARSIFVGNVD 74
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNE 118
HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNE
Sbjct: 75 YGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQALVLNE 128
>gi|345307423|ref|XP_001512125.2| PREDICTED: embryonic polyadenylate-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 412
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 75/139 (53%), Gaps = 15/139 (10%)
Query: 17 ELDDMKIRLKEME---EEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVG 73
EL+ +KI++ E+E E A + + S A + + E D+RSV+VG
Sbjct: 102 ELEAIKIKIWELEKAHERMKACEEAAVVTDSFFLSTDAGALFPGTPKEKMEADNRSVYVG 161
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF SCG +NRVTI DKF G PKGYAY+EF +V+ A+ L+ES
Sbjct: 162 NVDYGGTAEELESHFNSCGEINRVTILCDKFSGHPKGYAYIEFASESSVKAAVDLDESTF 221
Query: 122 HGRQLKVTVKRTNVPGMKQ 140
GR +KV KRTN+PG+
Sbjct: 222 RGRIIKVLPKRTNMPGISS 240
>gi|348544131|ref|XP_003459535.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Oreochromis niloticus]
Length = 284
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 66/112 (58%), Gaps = 14/112 (12%)
Query: 58 SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 105
S+ + E D RS++VGN HF CG+VNRVTI DK+ G PKG+AY+EF
Sbjct: 88 SIEEKMEADGRSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFA 147
Query: 106 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGA 157
E+V+ A+ L+ES GRQ+KV KRTN PG+ R P ++SRG
Sbjct: 148 DKESVRTAMALDESLFRGRQIKVGAKRTNRPGISTT--DRGFPRARFRSRGG 197
>gi|341895192|gb|EGT51127.1| hypothetical protein CAEBREN_00953 [Caenorhabditis brenneri]
Length = 205
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 89/164 (54%), Gaps = 19/164 (11%)
Query: 2 EGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAK-VGNEMASKQDPAAGGSSLA 60
E D +++ + +L ++ L E+EEE L+ + + VG+ + + SL
Sbjct: 8 EDDVLNIDDITEDDADLSAIEGDLNEIEEEQKKLKAIQNEMVGHMNLNTSSQSNSTQSLL 67
Query: 61 NREE---VDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 105
EE D++SV+VGN QHF CG+V RVTI DKF G PKG+AYVEF
Sbjct: 68 TPEEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVEFT 127
Query: 106 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPF 149
+ + +Q AL + +S L GRQ+KV KRTN PG+ RP PF
Sbjct: 128 EKDGMQNALAMTDSLLRGRQIKVDQKRTNRPGLST--TNRP-PF 168
>gi|308494172|ref|XP_003109275.1| CRE-PABP-2 protein [Caenorhabditis remanei]
gi|308246688|gb|EFO90640.1| CRE-PABP-2 protein [Caenorhabditis remanei]
Length = 205
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 89/160 (55%), Gaps = 17/160 (10%)
Query: 1 MEGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAK-VGNEMASKQDPAAGGSSL 59
++ D +++ + +L ++ L E+EEE L+ + + VG+ + + SL
Sbjct: 7 IDDDVLNIDDITEDDADLSAIEGDLNEIEEEQKKLKAIQNEMVGHMNLNTSSQSNSTQSL 66
Query: 60 ANREE---VDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEF 104
EE D++SV+VGN QHF CG+V RVTI DKF G PKG+AYVEF
Sbjct: 67 LTPEEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVEF 126
Query: 105 LQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQ-HRP 143
+ + +Q AL + +S L GRQ+KV KRTN PG+ +RP
Sbjct: 127 TEKDGMQNALAMTDSLLRGRQIKVDPKRTNRPGLSSTNRP 166
>gi|268536830|ref|XP_002633550.1| Hypothetical protein CBG05418 [Caenorhabditis briggsae]
Length = 181
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 71/122 (58%), Gaps = 16/122 (13%)
Query: 27 EMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-----------Q 75
E+E EA LR + K+ +MA+K P + ++E+D+RSVFVGN
Sbjct: 12 EIEAEAAVLRDIQNKMAEKMAAKTVP----QTAEEQKEIDARSVFVGNVDFGSTIAEIQD 67
Query: 76 HFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 134
HF+ CG + R TI DKF + K +AY+EF SE+++ AL +N S RQ+ VT KRTN
Sbjct: 68 HFKGCGVIVRTTIPKDKFTKRQKNFAYIEFESSESIENALVMNGSLFRARQIVVTAKRTN 127
Query: 135 VP 136
VP
Sbjct: 128 VP 129
>gi|194374387|dbj|BAG57089.1| unnamed protein product [Homo sapiens]
Length = 168
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 60/93 (64%), Gaps = 12/93 (12%)
Query: 58 SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 105
S+ + E D+RS++VGN HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 34 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 93
Query: 106 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
E+V+ +L L+ES GRQ+KV KRTN PG+
Sbjct: 94 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 126
>gi|126277431|ref|XP_001369327.1| PREDICTED: polyadenylate-binding protein 2-like [Monodelphis
domestica]
Length = 306
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 84/137 (61%), Gaps = 15/137 (10%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G S+ + E D+RS++VG
Sbjct: 118 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVG 177
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG+VNRVTI DKF G PKG+AY+EF ++V+ ++ L++S
Sbjct: 178 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKDSVRTSMALDDSLF 237
Query: 122 HGRQLKVTVKRTNVPGM 138
GRQ+KV KRTN PG+
Sbjct: 238 RGRQIKVIPKRTNRPGI 254
>gi|354465338|ref|XP_003495137.1| PREDICTED: embryonic polyadenylate-binding protein 2-like isoform 2
[Cricetulus griseus]
Length = 281
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 82/168 (48%), Gaps = 30/168 (17%)
Query: 13 NKQVELDDMKIRLKEME------EEATALRQMHAKVGNEMASKQDPAAGGSSLAN----R 62
+ Q EL+ +K++L ME E+ R+ + G E+ P G +
Sbjct: 85 DDQQELEAIKLKLWAMEHAETLPEQPYVQRKATEEKGAEVGQLLSPEIMGCFFPGTPKEK 144
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAV 110
E D RSV+VGN +F CG ++RVTI DKF G PKGYAY+EF +V
Sbjct: 145 VEADHRSVYVGNVDYGGSAAELRAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASQNSV 204
Query: 111 QEALHLNESELHGRQLKVTVKRTNVP--------GMKQHRPRRPNPFM 150
Q A+ L+ES GR +KV KRTN P G++ H R PF+
Sbjct: 205 QAAVELDESTFRGRVIKVLPKRTNFPGISSTDRGGLRTHLGSRAQPFL 252
>gi|255731418|ref|XP_002550633.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131642|gb|EER31201.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 203
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 85/144 (59%), Gaps = 25/144 (17%)
Query: 11 TENKQVELDDMKIRLKEMEEEATALR-QMHAKVGNEMASKQDPAAGGSSLAN--REEVDS 67
T N + D +++++E+EA LR Q+ A+ N G S L + + + DS
Sbjct: 23 TTNNNDDGQDYSNKMEQVEQEAAKLREQLQAESTNN---------GVSFLTDEQKRDSDS 73
Query: 68 RSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALH 115
RS+++GN QHF S G V+RVTI TDK GQ KG+AY+EF+ +E+VQ+A+
Sbjct: 74 RSIYIGNVDYGTLPIELQQHFSSAGVVSRVTIMTDKITGQAKGFAYLEFVDAESVQKAVD 133
Query: 116 -LNESELHGRQLKVTVKRTNVPGM 138
L+ S RQLKV+ KRTN+PG+
Sbjct: 134 TLDGSTFRERQLKVSAKRTNIPGI 157
>gi|281353092|gb|EFB28676.1| hypothetical protein PANDA_022375 [Ailuropoda melanoleuca]
Length = 152
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 60/93 (64%), Gaps = 12/93 (12%)
Query: 58 SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 105
S+ + E D+RS++VGN HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 20 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 79
Query: 106 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
E+V+ +L L+ES GRQ+KV KRTN PG+
Sbjct: 80 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 112
>gi|432851905|ref|XP_004067100.1| PREDICTED: embryonic polyadenylate-binding protein 2-like [Oryzias
latipes]
Length = 259
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 80/151 (52%), Gaps = 13/151 (8%)
Query: 1 MEGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAG-GSSL 59
+EG+ M E+ ++ +++ EMEE+ L++ EM S P +
Sbjct: 11 LEGEAMSGHINEDPELMAIKARVQELEMEEQTERLKEEERCDAEEMLSSPQPGPFYNMTP 70
Query: 60 ANREEVDSRSVFVGNQ-----------HFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQS 107
R + D+RSV+VGN HF CG VNRVTI D+F G PKG+AY+EF
Sbjct: 71 EERMDADNRSVYVGNVDYGATADELEIHFNGCGPVNRVTILCDRFSGHPKGFAYIEFSDR 130
Query: 108 EAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
A Q A+ L+E+ GR LKV KRTN+PG+
Sbjct: 131 SAAQSAVGLHETMFRGRVLKVLPKRTNMPGI 161
>gi|395503056|ref|XP_003755889.1| PREDICTED: polyadenylate-binding protein 2 [Sarcophilus harrisii]
Length = 333
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 89/153 (58%), Gaps = 16/153 (10%)
Query: 1 MEGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS--- 57
+E D I + EL+ +K R++EMEEEA L+++ +V +M P G
Sbjct: 130 LETQLADWIHSSGGW-ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIM 188
Query: 58 SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 105
S+ + E D+RS++VGN HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 189 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 248
Query: 106 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
++V+ ++ L++S GRQ+KV KRTN PG+
Sbjct: 249 DKDSVRTSMALDDSLFRGRQIKVIPKRTNRPGI 281
>gi|268564716|ref|XP_002639198.1| C. briggsae CBR-PABP-2 protein [Caenorhabditis briggsae]
Length = 205
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 89/160 (55%), Gaps = 17/160 (10%)
Query: 1 MEGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAK-VGNEMASKQDPAAGGSSL 59
++ D +++ + +L ++ L E+EEE L+ + + VG+ + + SL
Sbjct: 7 IDEDVLNIDDITEDDADLSAIEGDLNEIEEEQKKLKAIQNEMVGHMNLNTSSQSNSTQSL 66
Query: 60 ANREE---VDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEF 104
EE D++SV+VGN QHF CG+V RVTI DKF G PKG+AYVEF
Sbjct: 67 LTPEEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVEF 126
Query: 105 LQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK-QHRP 143
+ + +Q AL + +S L GRQ+KV KRTN PG+ +RP
Sbjct: 127 TEKDGMQNALAMTDSLLRGRQIKVDPKRTNRPGLSTTNRP 166
>gi|330846765|ref|XP_003295173.1| hypothetical protein DICPUDRAFT_24800 [Dictyostelium purpureum]
gi|325074172|gb|EGC28303.1| hypothetical protein DICPUDRAFT_24800 [Dictyostelium purpureum]
Length = 145
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 60/88 (68%), Gaps = 12/88 (13%)
Query: 61 NREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSE 108
++EE+D RS++VGN +FQSCGTVNR+TI +DK G PKG YVEFL E
Sbjct: 1 DQEEIDGRSIYVGNVDYKSTHDQILAYFQSCGTVNRITILSDKTTGHPKGCCYVEFLNKE 60
Query: 109 AVQEALHLNESELHGRQLKVTVKRTNVP 136
++ A+ LN+S + RQ+K+T KRTN+P
Sbjct: 61 SINNAMALNDSIFNDRQIKITPKRTNLP 88
>gi|159794905|pdb|2JWN|A Chain A, Solution Nmr Structure Of The Protease-Resistent Domain Of
Xenopus Laevis Epabp2
gi|159794906|pdb|2JWN|B Chain B, Solution Nmr Structure Of The Protease-Resistent Domain Of
Xenopus Laevis Epabp2
Length = 124
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 60/93 (64%), Gaps = 12/93 (12%)
Query: 58 SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 105
S ++E+D RSV+VGN HF SCG++NR+TI DKF G PKGYAY+EF
Sbjct: 27 SAEEKKEIDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFA 86
Query: 106 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
+ +V A+ ++E+ GR +KV KRTN+PG+
Sbjct: 87 ERNSVDAAVAMDETVFRGRTIKVLPKRTNMPGI 119
>gi|341898366|gb|EGT54301.1| hypothetical protein CAEBREN_10290 [Caenorhabditis brenneri]
Length = 223
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 62/100 (62%), Gaps = 15/100 (15%)
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 109
+ E D++SV+VGN QHF CG+V RVTI DKF G PKG+AYVEF + +
Sbjct: 90 KAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVEFTEKDG 149
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPF 149
+Q AL + +S L GRQ+KV KRTN PG+ RP PF
Sbjct: 150 MQNALAMTDSLLRGRQIKVDQKRTNRPGLST--TNRP-PF 186
>gi|302697041|ref|XP_003038199.1| hypothetical protein SCHCODRAFT_80477 [Schizophyllum commune H4-8]
gi|300111896|gb|EFJ03297.1| hypothetical protein SCHCODRAFT_80477 [Schizophyllum commune H4-8]
Length = 344
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 73/125 (58%), Gaps = 18/125 (14%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE---VDSRSVFVGN--- 74
MK R++EME+EA LR+M E AS+ +GG+ + E+ D+RS++VGN
Sbjct: 3 MKQRVEEMEKEAAKLREMQEAA--EKASESG-VSGGAPMDTEEDKTAADNRSIYVGNVDY 59
Query: 75 --------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
HFQ+CGT+NRVTI DKF G PKGYAYVEF + E V A+ ++ S GR
Sbjct: 60 SATPEDIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPEHVDAAVTMDNSLFKGRL 119
Query: 126 LKVTV 130
+K
Sbjct: 120 IKAVT 124
>gi|354465336|ref|XP_003495136.1| PREDICTED: embryonic polyadenylate-binding protein 2-like isoform 1
[Cricetulus griseus]
Length = 275
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 86/181 (47%), Gaps = 36/181 (19%)
Query: 6 MDMIETEN------KQVELDDMKIRLKEME------EEATALRQMHAKVGNEMASKQDPA 53
+ ++E EN EL+ +K++L ME E+ R+ + G E+ P
Sbjct: 66 LSLLEQENLAKSPGYNQELEAIKLKLWAMEHAETLPEQPYVQRKATEEKGAEVGQLLSPE 125
Query: 54 AGGSSLAN----REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPK 97
G + E D RSV+VGN +F CG ++RVTI DKF G PK
Sbjct: 126 IMGCFFPGTPKEKVEADHRSVYVGNVDYGGSAAELRAYFSPCGEIHRVTILCDKFSGHPK 185
Query: 98 GYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVP--------GMKQHRPRRPNPF 149
GYAY+EF +VQ A+ L+ES GR +KV KRTN P G++ H R PF
Sbjct: 186 GYAYIEFASQNSVQAAVELDESTFRGRVIKVLPKRTNFPGISSTDRGGLRTHLGSRAQPF 245
Query: 150 M 150
+
Sbjct: 246 L 246
>gi|165761289|pdb|3B4D|A Chain A, Crystal Structure Of Human Pabpn1 Rrm
gi|165761291|pdb|3B4M|A Chain A, Crystal Structure Of Human Pabpn1 Rrm
gi|165761292|pdb|3B4M|B Chain B, Crystal Structure Of Human Pabpn1 Rrm
gi|165761293|pdb|3B4M|C Chain C, Crystal Structure Of Human Pabpn1 Rrm
gi|165761294|pdb|3B4M|D Chain D, Crystal Structure Of Human Pabpn1 Rrm
Length = 96
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 57/87 (65%), Gaps = 12/87 (13%)
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 111
E D+RS++VGN HF CG+VNRVTI DKF G PKG+AY+EF E+V+
Sbjct: 2 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVR 61
Query: 112 EALHLNESELHGRQLKVTVKRTNVPGM 138
+L L+ES GRQ+KV KRTN PG+
Sbjct: 62 TSLALDESLFRGRQIKVIPKRTNRPGI 88
>gi|358009812|pdb|3UCG|A Chain A, Crystal Structure Of A Rna Binding Domain Of Hypothetical
Polyadenylate-Binding Protein (Pabpn1) From Homo Sapiens
At 1.95 A Resolution
Length = 89
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 57/87 (65%), Gaps = 12/87 (13%)
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 111
E D+RS++VGN HF CG+VNRVTI DKF G PKG+AY+EF E+V+
Sbjct: 3 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVR 62
Query: 112 EALHLNESELHGRQLKVTVKRTNVPGM 138
+L L+ES GRQ+KV KRTN PG+
Sbjct: 63 TSLALDESLFRGRQIKVIPKRTNRPGI 89
>gi|344299871|gb|EGW30224.1| hypothetical protein SPAPADRAFT_144523 [Spathaspora passalidarum
NRRL Y-27907]
Length = 217
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 73/123 (59%), Gaps = 22/123 (17%)
Query: 32 ATALRQMHAKVGNEMASKQDPAAGGSSLANREE---VDSRSVFVGN-----------QHF 77
A LR++H+++ N D A G + EE VD+RS+++GN QHF
Sbjct: 61 AAKLRELHSQLSN------DTAMSGITPQTDEEKRDVDARSIYIGNVDYGSTPLELQQHF 114
Query: 78 QSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL-HLNESELHGRQLKVTVKRTNV 135
SCG VNRVTI +K GQPKG+AY+EF + V +A+ L+ S RQLKV+ KRTN+
Sbjct: 115 SSCGIVNRVTILMNKHTGQPKGFAYLEFADVDGVNKAVATLDGSMFRDRQLKVSAKRTNI 174
Query: 136 PGM 138
PG+
Sbjct: 175 PGI 177
>gi|298706878|emb|CBJ25842.1| similar to Polyadenylate-binding protein 2 (Poly(A)-binding protein
2) (Poly(A)-binding protein II) (PABII)
(Polyadenylate-binding nuclear protein 1) (Nuclear
poly(A)-binding protein 1) [Ectocarpus siliculosus]
Length = 265
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 54/85 (63%), Gaps = 12/85 (14%)
Query: 66 DSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEA 113
D SV+VG HF++CGT+NRVTI DKF G+PKGYAY+EF + + A
Sbjct: 121 DESSVYVGQVDYDATPDELQSHFEACGTINRVTILCDKFSGRPKGYAYIEFADKDGSENA 180
Query: 114 LHLNESELHGRQLKVTVKRTNVPGM 138
L L+ S GR LKVT KRTNVPG+
Sbjct: 181 LALDNSPFKGRNLKVTPKRTNVPGL 205
>gi|327289636|ref|XP_003229530.1| PREDICTED: embryonic polyadenylate-binding protein 2-like, partial
[Anolis carolinensis]
Length = 262
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 84/144 (58%), Gaps = 16/144 (11%)
Query: 7 DMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVD 66
D+++ E + EL+ +K +++EME+E L+++ AK + + S A + E D
Sbjct: 84 DLLQKE-EDPELEAIKAKVREMEQEEW-LQELQAK--SLLLSSDSGLAFHRMTEEKVEAD 139
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL 114
RS++VGN HF +CG +NRVTI DKF G PKGYAY+EF +V+ A+
Sbjct: 140 QRSIYVGNVDYGGTAEQLESHFNNCGKINRVTILCDKFSGHPKGYAYIEFADKSSVKVAM 199
Query: 115 HLNESELHGRQLKVTVKRTNVPGM 138
L+ES R +KV KRTN+PG+
Sbjct: 200 ELDESVFRDRVIKVLPKRTNMPGI 223
>gi|167517171|ref|XP_001742926.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778025|gb|EDQ91640.1| predicted protein [Monosiga brevicollis MX1]
Length = 95
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 58/90 (64%), Gaps = 12/90 (13%)
Query: 61 NREEVDSRSVFVGNQH-----------FQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSE 108
+REEVD+RS++VGN F+ CG V R+ I DKF G PKG+ YVEF +
Sbjct: 4 SREEVDARSIYVGNVEYAATEEEIQALFKDCGVVKRIKIMRDKFTGHPKGFCYVEFAEPN 63
Query: 109 AVQEALHLNESELHGRQLKVTVKRTNVPGM 138
AV A+ L+ES HGRQ+KV KRTN+PG+
Sbjct: 64 AVPLAMALDESMFHGRQIKVKSKRTNLPGL 93
>gi|344292774|ref|XP_003418100.1| PREDICTED: embryonic polyadenylate-binding protein 2-like
[Loxodonta africana]
Length = 280
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 79/158 (50%), Gaps = 24/158 (15%)
Query: 7 DMIETENKQVELDDMKIRLKEMEE--EATALRQMHAKVGNEMASKQDPAAG--------- 55
++ E EL+ ++++L ME+ E L + V E + A G
Sbjct: 76 NLAECPAPDQELEAIRLKLWAMEQAGEPPGLPNIQGVVPGEEGTGIMLAGGLLSPETGLP 135
Query: 56 -GSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYV 102
S +EEVD RS++VGN +F CG ++RVTI DKF G PKGYAY+
Sbjct: 136 FPESPQEKEEVDHRSIYVGNVDYGATAEELEAYFNPCGEIHRVTILCDKFSGHPKGYAYI 195
Query: 103 EFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQ 140
EF + +VQ A+ L+ES R +KV KRTN PG+
Sbjct: 196 EFAATTSVQAAVKLDESVFRDRVIKVCPKRTNFPGISS 233
>gi|344242620|gb|EGV98723.1| Polyadenylate-binding protein 2 [Cricetulus griseus]
Length = 244
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 81/133 (60%), Gaps = 15/133 (11%)
Query: 13 NKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRS 69
+Q EL+ +K R++EMEEEA L+++ +V +M P G SL + E D+RS
Sbjct: 25 TRQEELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARS 84
Query: 70 VFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLN 117
++VGN HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+
Sbjct: 85 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 144
Query: 118 ESELHGRQLKVTV 130
ES GRQ+KV++
Sbjct: 145 ESLFRGRQIKVSI 157
>gi|344302535|gb|EGW32809.1| hypothetical protein SPAPADRAFT_60154 [Spathaspora passalidarum
NRRL Y-27907]
Length = 171
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 67/107 (62%), Gaps = 13/107 (12%)
Query: 47 ASKQDPAAGGSSLANREEVDSRSVFVGNQHFQS-----------CGTVNRVTIRTDKF-G 94
++ Q LA +EE+DSRS++VGN +QS G + RVTI D+F G
Sbjct: 12 SNSQSDVDNAEKLAKQEEIDSRSIYVGNVDYQSTPEQLEQFFHVVGIIERVTILFDRFSG 71
Query: 95 QPKGYAYVEFLQSEAVQEAL-HLNESELHGRQLKVTVKRTNVPGMKQ 140
PKGYAY+EF +S +VQ+A+ LN E GR+L+VT KRTN+PG ++
Sbjct: 72 LPKGYAYIEFEKSVSVQQAIDELNGKEFRGRELRVTSKRTNLPGFRK 118
>gi|221054742|ref|XP_002258510.1| rna-binding protein [Plasmodium knowlesi strain H]
gi|193808579|emb|CAQ39282.1| rna-binding protein, putative [Plasmodium knowlesi strain H]
Length = 202
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 96/175 (54%), Gaps = 31/175 (17%)
Query: 25 LKEMEEEATALRQMHAKVGNEMASKQDPAAGG--SSLANREEVDSRSVFVGN-------- 74
+ +++E + L+++ K+ NE A Q +GG S +EE+++RS+FVGN
Sbjct: 28 ISTIDKEFSDLQKL--KMMNEGADMQMNHSGGLDSHEMEQEEINNRSIFVGNVDYSTQPE 85
Query: 75 ---QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
F CG +NRVTI +K G KGYAY+EF + +V+ AL L+ES RQ+KV
Sbjct: 86 ELQSLFSECGLINRVTILVNKNTGHSKGYAYIEFADASSVRTALSLSESFFKKRQIKVCS 145
Query: 131 KRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 185
KR N+PG +RP R +PF RG I P ++P G + P FR P+Y
Sbjct: 146 KRRNIPGF--NRP-RISPF-----RGRSIKP-SFAPRGRLRQPSFR------PFY 185
>gi|341904125|gb|EGT59958.1| hypothetical protein CAEBREN_16301 [Caenorhabditis brenneri]
Length = 336
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 84/153 (54%), Gaps = 16/153 (10%)
Query: 2 EGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAK-VGNEMASKQDPAAGGSSLA 60
E D +++ + +L ++ L E+EEE L+ + + VG+ + + SL
Sbjct: 8 EDDVLNIDDITEDNADLSAIEGDLNEIEEEQEKLKAIQNEMVGHMNLNTSSQSDSTQSLL 67
Query: 61 NREE---VDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFL 105
EE D++SV+VGN QHF CG+V RVTI DKF + PKG+AYVEF
Sbjct: 68 TPEEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSRHPKGFAYVEFT 127
Query: 106 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
+ + +Q AL + +S L GRQ+KV KR N PG+
Sbjct: 128 EKDGMQNALAMTDSLLRGRQIKVDQKRANRPGL 160
>gi|168038419|ref|XP_001771698.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677005|gb|EDQ63481.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 746
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 100/194 (51%), Gaps = 35/194 (18%)
Query: 3 GDDMDMIETE-NKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA- 60
GD+ I E ++ +MK RL++++ + T LR A+V E+ + PAAG S+
Sbjct: 489 GDEQVTIANEVGHSKDVLEMKKRLRQVQLDMTKLRARQAEVSKEV--QNSPAAGVRSIPF 546
Query: 61 ----NREEVDSRSVFVGNQHFQS-----------CGTVNRVTIRTD-KFGQPKGYAYVEF 104
++E+++ RSVFV N HF + CG VNRVT+ + G+PKG A+VEF
Sbjct: 547 EPQPSQEDINDRSVFVTNVHFAATQAALRVHFGGCGYVNRVTLLVEPATGKPKGSAFVEF 606
Query: 105 LQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLY 164
+AV+ AL LNES L R LKV K + + M P+P + + IPP
Sbjct: 607 TTKDAVENALALNESSLLSRNLKVMRKDSAIAEMN------PDPSL----SSSFIPP--- 653
Query: 165 SPYGYGKIPRFRMP 178
P+ G PR MP
Sbjct: 654 -PFSRGH-PREHMP 665
>gi|151555091|gb|AAI48674.1| Similar to poly(A)binding protein nuclear-like 1 [synthetic
construct]
gi|162319022|gb|AAI56596.1| Similar to poly(A)binding protein nuclear-like 1 [synthetic
construct]
gi|261860988|dbj|BAI47016.1| Embryonic polyadenylate-binding protein 2 [synthetic construct]
Length = 289
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 79/161 (49%), Gaps = 28/161 (17%)
Query: 6 MDMIETEN------KQVELDDMKIRLKEMEEEATALR------QMHAKVGNEMASKQDPA 53
+ ++E EN EL+ +K+++ ME+ R Q + G P
Sbjct: 69 LSLLEQENLAECPLPDQELEAIKMKVCAMEQAEGTPRPPGVQQQAEEEEGTAAGQLLSPE 128
Query: 54 AGGSSLAN----REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPK 97
G L+ + E D RSV+VGN HF CG V+RVTI DKF G PK
Sbjct: 129 TVGCPLSGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPK 188
Query: 98 GYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
GYAY+EF +VQ A+ L++S GR +KV KRTN PG+
Sbjct: 189 GYAYIEFATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGI 229
>gi|164651984|gb|ABY64767.1| ePABP2 [Homo sapiens]
Length = 278
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 79/161 (49%), Gaps = 28/161 (17%)
Query: 6 MDMIETEN------KQVELDDMKIRLKEMEEEATALR------QMHAKVGNEMASKQDPA 53
+ ++E EN EL+ +K+++ ME+ R Q + G P
Sbjct: 69 LSLLEQENLAECPLPNQELEAIKMKVCAMEQAEGTPRPPRVQQQAEEEEGTAAGQLLSPE 128
Query: 54 AGGSSLAN----REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPK 97
G L+ + E D RSV+VGN HF CG V+RVTI DKF G PK
Sbjct: 129 TVGCPLSGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPK 188
Query: 98 GYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
GYAY+EF +VQ A+ L++S GR +KV KRTN PG+
Sbjct: 189 GYAYIEFATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGI 229
>gi|312283705|ref|NP_001073956.2| embryonic polyadenylate-binding protein 2 [Homo sapiens]
gi|205716472|sp|A6NDY0.1|EPAB2_HUMAN RecName: Full=Embryonic polyadenylate-binding protein 2;
Short=Embryonic poly(A)-binding protein 2;
Short=ePABP-2; Short=ePABP2; AltName: Full=Embryonic
poly(A)-binding protein type II; AltName:
Full=Poly(A)-binding protein nuclear-like 1
Length = 278
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 79/161 (49%), Gaps = 28/161 (17%)
Query: 6 MDMIETEN------KQVELDDMKIRLKEMEEEATALR------QMHAKVGNEMASKQDPA 53
+ ++E EN EL+ +K+++ ME+ R Q + G P
Sbjct: 69 LSLLEQENLAECPLPDQELEAIKMKVCAMEQAEGTPRPPGVQQQAEEEEGTAAGQLLSPE 128
Query: 54 AGGSSLAN----REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPK 97
G L+ + E D RSV+VGN HF CG V+RVTI DKF G PK
Sbjct: 129 TVGCPLSGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPK 188
Query: 98 GYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
GYAY+EF +VQ A+ L++S GR +KV KRTN PG+
Sbjct: 189 GYAYIEFATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGI 229
>gi|397625742|gb|EJK67902.1| hypothetical protein THAOC_10991, partial [Thalassiosira oceanica]
Length = 525
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 18/137 (13%)
Query: 17 ELDDMKIRLKEMEEEATALRQM-----HAKVGNEMASKQDPAAGGSSLANREEVDSRSVF 71
+L+ ++ + MEEEA + Q +K G A+K D + ++ A+ + D SV+
Sbjct: 346 DLEKLQAEIARMEEEAARIAQETEDLEKSKDGGTDAAKSDESKTAAA-ADGTKKDGHSVY 404
Query: 72 VGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNES 119
VG HF+SCGTV RVTI DKF G+PKG+AY+EF AV+ A+ L+ S
Sbjct: 405 VGQVDYSSTPEELLAHFESCGTVERVTIVCDKFTGKPKGFAYLEFQNESAVENAIKLDGS 464
Query: 120 ELHGRQLKVTVKRTNVP 136
RQLKVT KR N P
Sbjct: 465 TFKERQLKVTPKRVNDP 481
>gi|397468279|ref|XP_003805819.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Pan paniscus]
Length = 278
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 78/161 (48%), Gaps = 28/161 (17%)
Query: 6 MDMIETEN------KQVELDDMKIRLKEMEEEATALR------QMHAKVGNEMASKQDPA 53
+ ++E EN EL+ +K+++ ME+ R Q + G P
Sbjct: 69 LSLLEQENLAECPLPDQELEAIKMKVCAMEQAEGTPRPPGVQQQAEEEEGTAAGQLLSPE 128
Query: 54 AGGSSLAN----REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPK 97
G L + E D RSV+VGN HF CG V+RVTI DKF G PK
Sbjct: 129 TTGCRLPGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPK 188
Query: 98 GYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
GYAY+EF +VQ A+ L++S GR +KV KRTN PG+
Sbjct: 189 GYAYIEFATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGI 229
>gi|338723296|ref|XP_001488137.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Equus
caballus]
Length = 271
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 23/155 (14%)
Query: 7 DMIETENKQVELDDMKIRLKEMEEE-------ATALRQMHAKVGNEMASKQ-DPAAGGSS 58
D+ E EL+ +K++L ME+ A + A G +A + P G S
Sbjct: 68 DLAECPVPDQELEAIKLKLWAMEQAQGLEPPRVQAQAREEAGTGTTLAGQLLSPKTGCPS 127
Query: 59 LANREE---VDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVE 103
E D RS++VGN +F CG + RVTI DKF G PKGYAY+E
Sbjct: 128 PGTPTEKVQADHRSIYVGNVDYGGTAEELEAYFNQCGEIRRVTILCDKFSGHPKGYAYIE 187
Query: 104 FLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
F A Q A+ L+ES GR +KV KRTN+PG+
Sbjct: 188 FATESAAQTAVELDESIFRGRVIKVLPKRTNLPGI 222
>gi|332846661|ref|XP_003315290.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Pan
troglodytes]
Length = 266
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 78/161 (48%), Gaps = 28/161 (17%)
Query: 6 MDMIETEN------KQVELDDMKIRLKEMEEEATALR------QMHAKVGNEMASKQDPA 53
+ ++E EN EL+ +K+++ ME+ R Q + G P
Sbjct: 69 LSLLEQENLAECPLPDQELEAIKMKVCAMEQAEGTPRPPGVQQQAEEEEGTAAGQLLSPE 128
Query: 54 AGGSSLAN----REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPK 97
G L + E D RSV+VGN HF CG V+RVTI DKF G PK
Sbjct: 129 TTGCRLPGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPK 188
Query: 98 GYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
GYAY+EF +VQ A+ L++S GR +KV KRTN PG+
Sbjct: 189 GYAYIEFATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGI 229
>gi|426383231|ref|XP_004058190.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Gorilla
gorilla gorilla]
Length = 275
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 78/161 (48%), Gaps = 28/161 (17%)
Query: 6 MDMIETEN------KQVELDDMKIRLKEMEEEATALR------QMHAKVGNEMASKQDPA 53
+ ++E EN EL+ +K+++ ME+ R Q + G P
Sbjct: 66 LSLLEQENLAECPVPDQELEAIKMKVCAMEQAEGTPRPPGVQHQAEEEEGTAAGQLLSPE 125
Query: 54 AGGSSLAN----REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPK 97
G L + E D RSV+VGN HF CG V+RVTI DKF G PK
Sbjct: 126 TMGCPLPGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPK 185
Query: 98 GYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
GYAY+EF +VQ A+ L++S GR +KV KRTN PG+
Sbjct: 186 GYAYIEFATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGI 226
>gi|219120225|ref|XP_002180856.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407572|gb|EEC47508.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 97
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 56/85 (65%), Gaps = 12/85 (14%)
Query: 66 DSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEA 113
D+ S++VG HF++CGTV RVTI DKF G+PKG+AY+EF +V+ A
Sbjct: 1 DNYSIYVGQVDYSTTPEELLAHFEACGTVERVTIVCDKFTGKPKGFAYLEFENESSVENA 60
Query: 114 LHLNESELHGRQLKVTVKRTNVPGM 138
L L+ESE GRQLK+T KR N PGM
Sbjct: 61 LKLDESEFKGRQLKITHKRVNQPGM 85
>gi|395508493|ref|XP_003758545.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Sarcophilus
harrisii]
Length = 384
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 55/87 (63%), Gaps = 12/87 (13%)
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 111
E D RSV+VGN HF CG +NRVTI DK+ G PKGYAY+EF ++V+
Sbjct: 165 EADHRSVYVGNVDYSGTAEELESHFNCCGEINRVTILCDKYSGHPKGYAYIEFAYKDSVK 224
Query: 112 EALHLNESELHGRQLKVTVKRTNVPGM 138
A+ L+E+ GR +KV KRTN+PG+
Sbjct: 225 TAMDLDETTFRGRIIKVLPKRTNLPGI 251
>gi|359497153|ref|XP_002267022.2| PREDICTED: uncharacterized protein LOC100245696 [Vitis vinifera]
gi|296084732|emb|CBI25873.3| unnamed protein product [Vitis vinifera]
Length = 122
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 61/91 (67%), Gaps = 7/91 (7%)
Query: 1 MEGD------DMDMIETENKQV-ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPA 53
MEGD D+DM ++ V ELD+MK RLKEMEEEA ALR+M AKV EM + QDPA
Sbjct: 19 MEGDMDAHNADVDMATNDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPA 78
Query: 54 AGGSSLANREEVDSRSVFVGNQHFQSCGTVN 84
+ + AN+EE DSRSVFVGN + +V+
Sbjct: 79 SAAVTQANKEEADSRSVFVGNVRIRFLSSVH 109
>gi|403260900|ref|XP_003922888.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Saimiri
boliviensis boliviensis]
Length = 274
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 99/218 (45%), Gaps = 58/218 (26%)
Query: 2 EGDDMDMIETEN------KQVELDDMKIRLKEMEEEATALR--------QMHAKVGNEMA 47
EG + ++E EN EL+ +K+++ ME+ A LR + V ++
Sbjct: 63 EGFLLSLLEQENLAEFPMPDQELEAIKMKVWAMEQ-AEGLRWPPGAQRGEEEGAVAGQLL 121
Query: 48 SKQD---PAAGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF 93
S + P G + + E D RSV+VGN HF CG V RVTI DKF
Sbjct: 122 SLETAGHPIPG--TPEEKVEADHRSVYVGNVDYGGSAEELEAHFSCCGKVYRVTILCDKF 179
Query: 94 -GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK------------- 139
G PKGYAY+EF +VQ A+ L++S GR +KV KRTN PG+
Sbjct: 180 SGHPKGYAYIEFATKGSVQAAVQLDQSLFRGRVIKVLPKRTNFPGISSTDRGGLRGHPGS 239
Query: 140 ----------QHRPRRPNPFMVYQSRGAIIPPFLYSPY 167
Q RPR P Q+RG I P +SPY
Sbjct: 240 RGAPFPHSSLQGRPRF-RPRGQNQARGRISP--WFSPY 274
>gi|410984123|ref|XP_003998381.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Felis catus]
Length = 277
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 78/155 (50%), Gaps = 23/155 (14%)
Query: 7 DMIETENKQVELDDMKIRLKEMEE-EATALRQMHAKVGNEMASKQDPAA------GGSSL 59
++ E EL+ +K++L ME+ + + G E + PA G +
Sbjct: 74 ELAEYPEADQELEAIKVKLWAMEQAQGPEPPGAQGQAGREEGAGATPAGQLLSPEAGCTC 133
Query: 60 AN----REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVE 103
+ E D RSV+VGN +F SCG V+RVTI DKF G PKGYAY+E
Sbjct: 134 PGPPTEQLESDHRSVYVGNVDYGGTAEELEAYFNSCGEVHRVTILCDKFSGHPKGYAYIE 193
Query: 104 FLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
F + Q A+ L++S GR +KV KRTN+PG+
Sbjct: 194 FAAESSAQAAVALDKSIFRGRVIKVLPKRTNLPGI 228
>gi|353235207|emb|CCA67223.1| related to poly(a) binding protein II [Piriformospora indica DSM
11827]
Length = 173
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 54/87 (62%), Gaps = 12/87 (13%)
Query: 54 AGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAY 101
A G+ + ++ D+RS++VGN HF SCGT+NRVTI DKF G PKGYAY
Sbjct: 76 ASGADFSTDDDADARSIYVGNVDYGATPEEIQAHFASCGTINRVTILLDKFTGHPKGYAY 135
Query: 102 VEFLQSEAVQEALHLNESELHGRQLKV 128
VEF Q V+ AL LNES GR +KV
Sbjct: 136 VEFAQPAHVEAALVLNESLFRGRLIKV 162
>gi|291575265|gb|ADE10198.1| ePABP2 [Cynoglossus semilaevis]
Length = 260
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 58/89 (65%), Gaps = 12/89 (13%)
Query: 62 REEVDSRSVFVGNQ-----------HFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 109
R + D+RS++VGN HF +CG VNRVTI D+F G PKG+AY+EF ++
Sbjct: 74 RIDADNRSIYVGNVDYGATADELEIHFNACGPVNRVTILCDRFSGHPKGFAYIEFSDRDS 133
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGM 138
VQ A+ L+E+ GR LKV KRTN+PG+
Sbjct: 134 VQSAIGLHETLFRGRVLKVLPKRTNMPGI 162
>gi|348550266|ref|XP_003460953.1| PREDICTED: embryonic polyadenylate-binding protein 2-like [Cavia
porcellus]
Length = 273
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 52/88 (59%), Gaps = 12/88 (13%)
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 111
E D RS++VGN HF CG V+RVTI DKF G PKGYAYVEF + Q
Sbjct: 138 EADHRSIYVGNVDYGGTAEELEAHFHRCGEVHRVTILCDKFSGHPKGYAYVEFATQRSAQ 197
Query: 112 EALHLNESELHGRQLKVTVKRTNVPGMK 139
A+ L+ES GR LKV KRTN PG+
Sbjct: 198 AAVELDESIFRGRALKVLPKRTNFPGIS 225
>gi|367017760|ref|XP_003683378.1| hypothetical protein TDEL_0H03080 [Torulaspora delbrueckii]
gi|359751042|emb|CCE94167.1| hypothetical protein TDEL_0H03080 [Torulaspora delbrueckii]
Length = 275
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 71/123 (57%), Gaps = 20/123 (16%)
Query: 45 EMASKQDPAAGGSSLANREE-------VDSRSVFVGN-----------QHFQSCGTVNRV 86
+++ + P A G +REE DSRS+FVGN +HF+ CG + R+
Sbjct: 47 DLSIDEKPNANGLPKLSREERYAAQVEADSRSIFVGNITPEITPEIIDEHFKDCGVIERI 106
Query: 87 TIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRP-R 144
T+ DK G PKGYAYVEF ++A ++AL N SEL G ++ V KRTN+PG +H +
Sbjct: 107 TLLYDKNTGAPKGYAYVEFENADAQEKALEHNGSELKGGKISVYKKRTNLPGYHRHAQFQ 166
Query: 145 RPN 147
RPN
Sbjct: 167 RPN 169
>gi|320582005|gb|EFW96224.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Ogataea parapolymorpha DL-1]
Length = 156
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 63/105 (60%), Gaps = 12/105 (11%)
Query: 50 QDPAAGGSSLANREEVDSRSVFVGNQHFQS-----------CGTVNRVTIRTDKF-GQPK 97
Q P + +N++E+DSRSV++GN + + CG +NR+TI DK G+P+
Sbjct: 9 QQPRLAPNQPSNQQEIDSRSVYLGNVDYSALPGDLKELLDDCGVINRITILYDKHTGKPR 68
Query: 98 GYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHR 142
GYA+VEF E Q+A+ +N +E GR L VT KRTN PG+ R
Sbjct: 69 GYAFVEFETHEGAQKAVAMNGTEFRGRTLTVTPKRTNYPGITNAR 113
>gi|348516557|ref|XP_003445805.1| PREDICTED: polyadenylate-binding protein 2-like [Oreochromis
niloticus]
Length = 240
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 12/89 (13%)
Query: 62 REEVDSRSVFVGNQ-----------HFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 109
R + D+RS++VGN HF CG VNRVTI D+F G PKG+AY+EF ++
Sbjct: 54 RIDADNRSIYVGNVDYGATADELEIHFNGCGPVNRVTILCDRFSGHPKGFAYIEFSDRDS 113
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGM 138
VQ A+ L+E+ GR LKV KRTN+PG+
Sbjct: 114 VQSAIGLHETLFRGRVLKVMPKRTNMPGI 142
>gi|365760126|gb|EHN01868.1| Sgn1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 250
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 64/106 (60%), Gaps = 12/106 (11%)
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQS 107
A++ E DSRS+FVGN +HFQ CG + R+T+ D+ G PKGY Y+EF
Sbjct: 56 AHQLEADSRSIFVGNITLDVTPEQIEEHFQDCGLIKRITLLYDRNTGAPKGYGYIEFESP 115
Query: 108 EAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQ 153
++AL LN EL+G+++ V+ KRTN+PG +H+ + F +Q
Sbjct: 116 AFREKALQLNGVELNGKKIAVSRKRTNIPGFNRHQNSQNQYFQQWQ 161
>gi|126304970|ref|XP_001376941.1| PREDICTED: embryonic polyadenylate-binding protein 2-like
[Monodelphis domestica]
Length = 322
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 61/116 (52%), Gaps = 16/116 (13%)
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 111
E D RSV+VGN HF CG +NRVTI DK+ G PKGYAY+EF ++V+
Sbjct: 166 ESDQRSVYVGNVDYSGTAKELESHFSCCGEINRVTILCDKYSGHPKGYAYIEFAHEDSVK 225
Query: 112 EALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPY 167
A L+E+ GR +KV KRTN PG+ R P RG PP S Y
Sbjct: 226 TAAELDETTFRGRIIKVLPKRTNFPGISTT--NRGGPRNRLSGRGC--PPLRCSLY 277
>gi|417409509|gb|JAA51255.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 303
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 85/144 (59%), Gaps = 18/144 (12%)
Query: 1 MEGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS--- 57
+EGD D + + EL+ +K R++EMEEEA L+++ +V +M P G
Sbjct: 74 VEGDPGD---SAIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIM 130
Query: 58 SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 105
S+ + E D+RS++VGN HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 131 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 190
Query: 106 QSEAVQEALHLNESELHGRQLKVT 129
E+V+ +L L+ES GRQ+KV+
Sbjct: 191 DKESVRTSLALDESLFRGRQIKVS 214
>gi|401842846|gb|EJT44882.1| SGN1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 250
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 64/106 (60%), Gaps = 12/106 (11%)
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQS 107
A++ E DSRS+FVGN +HFQ CG + R+T+ D+ G PKGY Y+EF
Sbjct: 56 AHQLEADSRSIFVGNITLDVTPEQIEEHFQDCGLIKRITLLYDRNTGAPKGYGYIEFESP 115
Query: 108 EAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQ 153
++AL LN EL+G+++ V+ KRTN+PG +H+ + F +Q
Sbjct: 116 AFREKALQLNGVELNGKKIAVSRKRTNIPGFNRHQNSQNQYFQQWQ 161
>gi|68483054|ref|XP_714561.1| hypothetical protein CaO19.1389 [Candida albicans SC5314]
gi|46436140|gb|EAK95508.1| hypothetical protein CaO19.1389 [Candida albicans SC5314]
Length = 163
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 61/91 (67%), Gaps = 13/91 (14%)
Query: 59 LANREEVDSRSVFVGNQHFQS-----------CGTVNRVTIRTDKF-GQPKGYAYVEFLQ 106
LA +EE+D RSV+VGN +QS G + RVTI D+F G PKGYAY+EF Q
Sbjct: 19 LAKQEEIDGRSVYVGNVDYQSTPEQLEEFFHGVGVIERVTILFDRFSGLPKGYAYIEFEQ 78
Query: 107 SEAVQEAL-HLNESELHGRQLKVTVKRTNVP 136
+E+VQ+A+ L+ E GR+L+VT KRTN+P
Sbjct: 79 TESVQKAIDELHGKEFRGRELRVTAKRTNLP 109
>gi|166157542|ref|NP_001107251.1| embryonic polyadenylate-binding protein 2 [Rattus norvegicus]
gi|205716473|sp|B0BNE4.1|EPAB2_RAT RecName: Full=Embryonic polyadenylate-binding protein 2;
Short=Embryonic poly(A)-binding protein 2;
Short=ePABP-2; Short=ePABP2; AltName: Full=Embryonic
poly(A)-binding protein type II; AltName:
Full=Poly(A)-binding protein nuclear-like 1
gi|165970991|gb|AAI58790.1| Pabpnl1 protein [Rattus norvegicus]
Length = 269
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 53/87 (60%), Gaps = 12/87 (13%)
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 111
E D RSV+VGN +F CG ++RVTI DKF G PKGYAY+EF +VQ
Sbjct: 135 EADHRSVYVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASKSSVQ 194
Query: 112 EALHLNESELHGRQLKVTVKRTNVPGM 138
A+ L+ES GR +KV KRTN PG+
Sbjct: 195 AAVRLDESTFRGRVIKVLPKRTNFPGI 221
>gi|68482858|ref|XP_714655.1| hypothetical protein CaO19.8967 [Candida albicans SC5314]
gi|46436241|gb|EAK95607.1| hypothetical protein CaO19.8967 [Candida albicans SC5314]
gi|238883823|gb|EEQ47461.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 163
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 61/91 (67%), Gaps = 13/91 (14%)
Query: 59 LANREEVDSRSVFVGNQHFQSC-----------GTVNRVTIRTDKF-GQPKGYAYVEFLQ 106
LA +EE+D RSV+VGN +QS G + RVTI D+F G PKGYAY+EF Q
Sbjct: 19 LAKQEEIDGRSVYVGNVDYQSTPEQLEEFFHGVGVIERVTILFDRFSGLPKGYAYIEFEQ 78
Query: 107 SEAVQEAL-HLNESELHGRQLKVTVKRTNVP 136
+E+VQ+A+ L+ E GR+L+VT KRTN+P
Sbjct: 79 TESVQKAIDELHGKEFRGRELRVTAKRTNLP 109
>gi|241952250|ref|XP_002418847.1| cytoplasmic RNA-binding protein, putative [Candida dubliniensis
CD36]
gi|223642186|emb|CAX44153.1| cytoplasmic RNA-binding protein, putative [Candida dubliniensis
CD36]
Length = 163
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 61/91 (67%), Gaps = 13/91 (14%)
Query: 59 LANREEVDSRSVFVGNQHFQSC-----------GTVNRVTIRTDKF-GQPKGYAYVEFLQ 106
LA +EE+D RSV+VGN +QS G + RVTI D+F G PKGYAY+EF Q
Sbjct: 19 LAKQEEIDGRSVYVGNVDYQSTPEQLEEFFHGVGVIERVTILFDRFSGLPKGYAYIEFEQ 78
Query: 107 SEAVQEAL-HLNESELHGRQLKVTVKRTNVP 136
+E+VQ+A+ L+ E GR+L+VT KRTN+P
Sbjct: 79 TESVQKAIDELHGKEFRGRELRVTAKRTNLP 109
>gi|402909310|ref|XP_003917365.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Papio anubis]
Length = 291
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 53/87 (60%), Gaps = 12/87 (13%)
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 111
E D RSV+VGN HF CG V+RVTI DKF G PKGYAY+EF +VQ
Sbjct: 156 EADHRSVYVGNVDYGGSAEELEAHFSGCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQ 215
Query: 112 EALHLNESELHGRQLKVTVKRTNVPGM 138
A+ L++S GR +KV KRTN PG+
Sbjct: 216 AAVELDQSLFRGRVIKVLPKRTNFPGI 242
>gi|149038404|gb|EDL92764.1| similar to embryonic pol(yA) binding protein 2 (predicted) [Rattus
norvegicus]
Length = 284
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 53/87 (60%), Gaps = 12/87 (13%)
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 111
E D RSV+VGN +F CG ++RVTI DKF G PKGYAY+EF +VQ
Sbjct: 150 EADHRSVYVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASKSSVQ 209
Query: 112 EALHLNESELHGRQLKVTVKRTNVPGM 138
A+ L+ES GR +KV KRTN PG+
Sbjct: 210 AAVRLDESTFRGRVIKVLPKRTNFPGI 236
>gi|85000163|ref|XP_954800.1| RNA poly(A)-binding protein [Theileria annulata strain Ankara]
gi|65302946|emb|CAI75324.1| RNA poly(A)-binding protein, putative [Theileria annulata]
Length = 176
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 68/126 (53%), Gaps = 21/126 (16%)
Query: 24 RLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN--------- 74
RL +++E L+Q+ +M + N E+VD RS++VGN
Sbjct: 7 RLTVLDDE---LKQLQGMTDCQMLTDD------MDTDNNEDVDKRSIYVGNVDYSTKPQE 57
Query: 75 --QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVK 131
+ F+S G +NR+TI DK+ G PKGYAYVEF +AV A+ LNES R +KV K
Sbjct: 58 LQEFFKSSGQINRITIMVDKYTGHPKGYAYVEFSNEDAVNNAIMLNESLFKERIIKVIPK 117
Query: 132 RTNVPG 137
R N+PG
Sbjct: 118 RKNIPG 123
>gi|403223382|dbj|BAM41513.1| predicted protein [Theileria orientalis strain Shintoku]
Length = 150
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 67/138 (48%), Gaps = 31/138 (22%)
Query: 18 LDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN--- 74
LDD RLK M + A M E+VD RS++VGN
Sbjct: 11 LDDELKRLKGMTDSQYATEDMDTDTN-------------------EDVDRRSIYVGNVDY 51
Query: 75 --------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
+ F+S G +NR+TI DK+ G PKGYAYVEF +AV A+ LN+S R
Sbjct: 52 STKPQELQEFFKSSGQINRITIMVDKWTGHPKGYAYVEFSSEDAVGNAVMLNDSLFKERI 111
Query: 126 LKVTVKRTNVPGMKQHRP 143
+KV KR N+PG + RP
Sbjct: 112 IKVIPKRKNIPGFNRRRP 129
>gi|417409417|gb|JAA51214.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 293
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 85/144 (59%), Gaps = 18/144 (12%)
Query: 1 MEGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS--- 57
+EGD D + + EL+ +K R++EMEEEA L+++ +V +M P G
Sbjct: 74 VEGDPGD---SAIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIM 130
Query: 58 SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 105
S+ + E D+RS++VGN HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 131 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 190
Query: 106 QSEAVQEALHLNESELHGRQLKVT 129
E+V+ +L L+ES GRQ+KV+
Sbjct: 191 DKESVRTSLALDESLFRGRQIKVS 214
>gi|417399667|gb|JAA46825.1| Putative apoptosis regulator [Desmodus rotundus]
Length = 361
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 78/128 (60%), Gaps = 15/128 (11%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G S+ + E D+RS++VG
Sbjct: 145 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVG 204
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+ES
Sbjct: 205 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 264
Query: 122 HGRQLKVT 129
GRQ+KV+
Sbjct: 265 RGRQIKVS 272
>gi|71026927|ref|XP_763107.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350060|gb|EAN30824.1| RNA binding protein, putative [Theileria parva]
Length = 151
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 68/127 (53%), Gaps = 21/127 (16%)
Query: 24 RLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN--------- 74
RL +++E L+Q+ +M + N E+VD RS++VGN
Sbjct: 7 RLTVLDDE---LKQLQGMTDCQMVTDD------MDTDNHEDVDKRSIYVGNVDYSTKPQE 57
Query: 75 --QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVK 131
+ F+S G +NR+TI DK+ G PKGYAYVEF +AV A+ LNES R +KV K
Sbjct: 58 LQEFFKSSGQINRITIMVDKYTGHPKGYAYVEFSNEDAVNNAIMLNESLFKERIIKVIPK 117
Query: 132 RTNVPGM 138
R N+PG
Sbjct: 118 RKNIPGF 124
>gi|297284777|ref|XP_001117810.2| PREDICTED: embryonic polyadenylate-binding protein 2-like, partial
[Macaca mulatta]
Length = 147
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 53/87 (60%), Gaps = 12/87 (13%)
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 111
E D RSV+VGN HF CG V+RVTI DKF G PKGYAY+EF +VQ
Sbjct: 12 EADHRSVYVGNVDYGGSAEELEAHFSGCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQ 71
Query: 112 EALHLNESELHGRQLKVTVKRTNVPGM 138
A+ L++S GR +KV KRTN PG+
Sbjct: 72 AAVELDQSLFRGRVIKVLPKRTNFPGI 98
>gi|417399469|gb|JAA46738.1| Putative apoptosis regulator [Desmodus rotundus]
Length = 351
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 78/128 (60%), Gaps = 15/128 (11%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G S+ + E D+RS++VG
Sbjct: 145 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVG 204
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 121
N HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+ES
Sbjct: 205 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 264
Query: 122 HGRQLKVT 129
GRQ+KV+
Sbjct: 265 RGRQIKVS 272
>gi|341895844|gb|EGT51779.1| hypothetical protein CAEBREN_09841 [Caenorhabditis brenneri]
Length = 187
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 14/122 (11%)
Query: 27 EMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-----------Q 75
E+EEE L+ M K+ E+ + A S ++E+D+RSVFVGN
Sbjct: 14 EIEEERLVLQDMQKKMAEELNKSE--RASPPSTEEQKEIDARSVFVGNVDFGSTIEELEA 71
Query: 76 HFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 134
HF+ CGT+ R TI DK+ Q K +AY+EF ++V+ AL ++E+ R++ VT KRTN
Sbjct: 72 HFKGCGTITRTTIPKDKYTQRQKNFAYIEFEDKDSVEMALVMHETMFRDRRIVVTAKRTN 131
Query: 135 VP 136
VP
Sbjct: 132 VP 133
>gi|70943999|ref|XP_741979.1| RNA-binding protein [Plasmodium chabaudi chabaudi]
gi|56520699|emb|CAH74539.1| RNA-binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 194
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 83/149 (55%), Gaps = 22/149 (14%)
Query: 10 ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGG--SSLANREEVDS 67
E EN + ++DD + +++E + L+++ K+ N+ A Q G S +EE+++
Sbjct: 14 EEENFRAQVDD----INNIDKEFSDLQKL--KMMNDGAEMQMNQGGAPDSHEMEQEEINN 67
Query: 68 RSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH 115
RS+FVGN F CG +NRVTI +K G KGYAY+EF +V+ AL
Sbjct: 68 RSIFVGNVDYSTQPEELQSLFSECGVINRVTILVNKNTGHSKGYAYIEFADPSSVRTALS 127
Query: 116 LNESELHGRQLKVTVKRTNVPGMKQHRPR 144
L+ES RQ+KV KR N+PG +RPR
Sbjct: 128 LSESFFKKRQIKVCSKRRNIPGF--NRPR 154
>gi|410912492|ref|XP_003969723.1| PREDICTED: polyadenylate-binding protein 2-like [Takifugu rubripes]
Length = 262
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 56/89 (62%), Gaps = 12/89 (13%)
Query: 62 REEVDSRSVFVGNQ-----------HFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 109
R + D+RSV+VGN HF CG VNRVTI D+F G PKG+AY+EF ++
Sbjct: 76 RIDADNRSVYVGNVDYGATADELEIHFNGCGPVNRVTILCDRFSGHPKGFAYIEFSDRDS 135
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGM 138
V A+ L+E+ GR LKV KRTN+PG+
Sbjct: 136 VNSAIGLHETLFRGRVLKVLPKRTNLPGI 164
>gi|341895850|gb|EGT51785.1| hypothetical protein CAEBREN_00783 [Caenorhabditis brenneri]
Length = 186
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 72/122 (59%), Gaps = 14/122 (11%)
Query: 27 EMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-----------Q 75
E+++E L++M K+ ++ + A SL ++E+D+RS+FVGN
Sbjct: 14 EIDQERLVLQEMQEKMAEQL--NRSGKAPPPSLDEQKEIDARSIFVGNVDFGSTVDELEA 71
Query: 76 HFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 134
HF+ CG + R TI DK+ Q K +AY+EF + E+V+ AL ++E+ RQ+ VT KRTN
Sbjct: 72 HFKGCGLITRTTIPKDKYSQRQKNFAYIEFEEKESVEMALIMHETTFRDRQIVVTAKRTN 131
Query: 135 VP 136
VP
Sbjct: 132 VP 133
>gi|148679749|gb|EDL11696.1| poly(A)binding protein nuclear-like 1 [Mus musculus]
Length = 288
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 53/87 (60%), Gaps = 12/87 (13%)
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 111
E D RSVFVGN +F CG ++RVTI DKF G PKGYAY+EF +V+
Sbjct: 154 EADHRSVFVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASHRSVK 213
Query: 112 EALHLNESELHGRQLKVTVKRTNVPGM 138
A+ L+ES GR +KV KRTN PG+
Sbjct: 214 AAVGLDESTFRGRVIKVLPKRTNFPGI 240
>gi|395856895|ref|XP_003800852.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Otolemur
garnettii]
Length = 274
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 12/87 (13%)
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 111
E D RS++VGN HF CG ++RVTI DKF G PKGYAY+EF + Q
Sbjct: 139 EADHRSIYVGNVDYGGTAEELEAHFNCCGEIHRVTILCDKFSGHPKGYAYIEFATKSSAQ 198
Query: 112 EALHLNESELHGRQLKVTVKRTNVPGM 138
A+ L++S GR +KV KRTN PG+
Sbjct: 199 AAVELDDSVFRGRVIKVLPKRTNFPGI 225
>gi|219519920|gb|AAI45635.1| Pabpnl1 protein [Mus musculus]
Length = 288
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 53/87 (60%), Gaps = 12/87 (13%)
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 111
E D RSVFVGN +F CG ++RVTI DKF G PKGYAY+EF +V+
Sbjct: 154 EADHRSVFVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASHRSVK 213
Query: 112 EALHLNESELHGRQLKVTVKRTNVPGM 138
A+ L+ES GR +KV KRTN PG+
Sbjct: 214 AAVGLDESTFRGRVIKVLPKRTNFPGI 240
>gi|156097476|ref|XP_001614771.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148803645|gb|EDL45044.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 202
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 98/187 (52%), Gaps = 35/187 (18%)
Query: 13 NKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGG--SSLANREEVDSRSV 70
N V +DD + +++E + L+++ K+ NE A Q +G S +EE+++RS+
Sbjct: 20 NFNVPVDD----INSIDKEFSDLQKL--KMMNEGAEMQMNQSGALDSHEMEQEEINNRSI 73
Query: 71 FVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNE 118
FVGN F CG +NRVTI +K G KGYAY+EF + +V+ AL L+E
Sbjct: 74 FVGNVDYSTQPEELQSLFSECGLINRVTILVNKNTGHSKGYAYIEFADASSVRTALSLSE 133
Query: 119 SELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMP 178
S RQ+KV KR N+PG +RP + +PF RG + L P G + P FR
Sbjct: 134 SFFKKRQIKVCSKRRNIPGF--NRP-KISPF-----RGRSMKATL-GPRGRLRQPSFR-- 182
Query: 179 MRYSPYY 185
P+Y
Sbjct: 183 ----PFY 185
>gi|55925591|ref|NP_001007463.1| embryonic polyadenylate-binding protein 2 [Mus musculus]
gi|81910338|sp|Q5XFR0.1|EPAB2_MOUSE RecName: Full=Embryonic polyadenylate-binding protein 2;
Short=Embryonic poly(A)-binding protein 2;
Short=ePABP-2; Short=ePABP2; AltName: Full=Embryonic
poly(A)-binding protein type II; AltName:
Full=Poly(A)-binding protein nuclear-like 1
gi|54111431|tpg|DAA02003.1| TPA_exp: embryonic poly(A) binding protein 2 [Mus musculus]
gi|223461244|gb|AAI41318.1| Poly(A)binding protein nuclear-like 1 [Mus musculus]
gi|223461425|gb|AAI41317.1| Poly(A)binding protein nuclear-like 1 [Mus musculus]
Length = 273
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 19/150 (12%)
Query: 1 MEGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA 60
+E + + E+ + + + ++ K EEE +RQ+ ++ + +
Sbjct: 83 LEAIKLKLWAMEHAEAQPEPPCVQRKATEEERAEVRQL-------LSPETVDCFFSRTSK 135
Query: 61 NREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSE 108
E D RSVFVGN +F CG ++RVTI DKF G PKGYAY+EF
Sbjct: 136 ENVEADHRSVFVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASHR 195
Query: 109 AVQEALHLNESELHGRQLKVTVKRTNVPGM 138
+V+ A+ L+ES GR +KV KRTN PG+
Sbjct: 196 SVKAAVGLDESTFRGRVIKVLPKRTNFPGI 225
>gi|426243462|ref|XP_004015574.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Ovis aries]
Length = 272
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 69/129 (53%), Gaps = 27/129 (20%)
Query: 25 LKEMEEEATAL--RQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-------- 74
L E EE A AL RQ+ ++ K D S + E D RSV+VGN
Sbjct: 109 LDEGEEAAGALLARQL-------LSPKTD------SPLEKAEADHRSVYVGNVDYGGTAQ 155
Query: 75 ---QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
+F CG ++RVTI DKF G PKGYAY+EF + Q A+ L++S GR +KV
Sbjct: 156 ELEAYFNHCGEIHRVTILCDKFSGHPKGYAYIEFATESSAQAAVELDKSIFRGRVIKVLP 215
Query: 131 KRTNVPGMK 139
KRTN+PG+
Sbjct: 216 KRTNLPGIS 224
>gi|395748220|ref|XP_003778730.1| PREDICTED: LOW QUALITY PROTEIN: embryonic polyadenylate-binding
protein 2 [Pongo abelii]
Length = 278
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 86/180 (47%), Gaps = 36/180 (20%)
Query: 6 MDMIETEN------KQVELDDMKIRLKEMEEEATALR----QMHAKVGNEMASKQ--DPA 53
+ ++E EN EL+ +K+++ ME+ R Q A+ ++Q P
Sbjct: 69 LSLLEQENLAECPVPDQELEAIKMKVCAMEQAEGTPRPPGVQHQAEEEEGTVARQLLSPE 128
Query: 54 AGGSSLAN----REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPK 97
G L + E RSV+VGN HF CG V+RVTI DKF G PK
Sbjct: 129 TMGCPLPGTPEEKVEAXHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPK 188
Query: 98 GYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVP--------GMKQHRPRRPNPF 149
GYAY+EF +VQ A+ L++S GR +KV KRTN P G++ H+ R PF
Sbjct: 189 GYAYIEFATKRSVQAAVELDQSLFRGRVIKVLPKRTNFPGISSTDRGGLRGHQGSRGAPF 248
>gi|124507026|ref|XP_001352110.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23505139|emb|CAD51921.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 202
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 93/170 (54%), Gaps = 30/170 (17%)
Query: 1 MEGDDMDMIETE-------NKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPA 53
ME ++D + E N +V++DD + +++E + L+++ K+ NE A Q
Sbjct: 1 MEQVNIDQMNAEKAKGDGANFKVQVDD----INNIDKEFSDLQKL--KMMNEGAEIQMNQ 54
Query: 54 AGG--SSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGY 99
G S +EE+++RS+FVGN F CG +NRVTI +K G KGY
Sbjct: 55 GGNVDSHEQEQEEINNRSIFVGNVDYSTQPEELQSLFSECGLINRVTILVNKNTGHSKGY 114
Query: 100 AYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPF 149
AY+EF + +V+ AL L+ES RQ+KV KR N+PG +RP + +PF
Sbjct: 115 AYIEFADASSVRTALSLSESFFKKRQIKVCSKRRNIPGF--NRP-KISPF 161
>gi|396461545|ref|XP_003835384.1| hypothetical protein LEMA_P047250.1 [Leptosphaeria maculans JN3]
gi|312211935|emb|CBX92019.1| hypothetical protein LEMA_P047250.1 [Leptosphaeria maculans JN3]
Length = 186
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 76/149 (51%), Gaps = 42/149 (28%)
Query: 2 EGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLAN 61
E + +D E N++ E+ M+ R++EME+EA LR+M + NE ++ +
Sbjct: 12 EDERLDTAEDPNEEEEISAMRRRVQEMEDEAAKLREMQQSLDNERHEMRE---------S 62
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 109
+E+VD+RSVFVGN HFQS G++NRVTI DKF G PKG
Sbjct: 63 KEDVDARSVFVGNVDYGASPEEIQAHFQSIGSINRVTILLDKFTGHPKG----------- 111
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGM 138
+ R LKV KRTN+PGM
Sbjct: 112 ----------QFRDRNLKVVPKRTNLPGM 130
>gi|448105136|ref|XP_004200421.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|448108271|ref|XP_004201052.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|359381843|emb|CCE80680.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|359382608|emb|CCE79915.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
Length = 184
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 60/96 (62%), Gaps = 13/96 (13%)
Query: 57 SSLANREEVDSRSVFVGNQHFQSC-----------GTVNRVTIRTDKF-GQPKGYAYVEF 104
S+L +EE D RS+++GN +QS G V RVTI DKF G PKGYAYVEF
Sbjct: 40 STLQAQEEADKRSIYIGNVDYQSTPEQLENFFSTVGAVKRVTILFDKFSGFPKGYAYVEF 99
Query: 105 LQSEAVQEALH-LNESELHGRQLKVTVKRTNVPGMK 139
+ E+ Q+A+ LN S GR+L+V KRTN+PG +
Sbjct: 100 EEYESAQKAIEELNGSPFRGRELRVMTKRTNIPGQR 135
>gi|296478138|tpg|DAA20253.1| TPA: ePABP2-like [Bos taurus]
Length = 272
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 75/141 (53%), Gaps = 18/141 (12%)
Query: 17 ELDDMKIRLKEMEEE--ATALRQMHAKVGNEMA----SKQDPAAGGSSLANREEVDSRSV 70
EL+ +K++L ME+ R + G E A ++Q + S + E D RS+
Sbjct: 84 ELEAIKLKLWAMEQAQGPEPPRVQNLDEGEEAAGALLARQLLSPETDSPLEKAEADHRSI 143
Query: 71 FVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNE 118
+VGN +F CG ++RVTI DKF G PKGYAY+EF + Q A+ L++
Sbjct: 144 YVGNVDYGGTAQELEAYFNHCGEIHRVTILCDKFSGHPKGYAYIEFATESSAQAAVELDK 203
Query: 119 SELHGRQLKVTVKRTNVPGMK 139
S GR +KV KRTN+PG+
Sbjct: 204 SIFRGRVIKVLPKRTNLPGIS 224
>gi|238605300|ref|XP_002396414.1| hypothetical protein MPER_03357 [Moniliophthora perniciosa FA553]
gi|215468958|gb|EEB97344.1| hypothetical protein MPER_03357 [Moniliophthora perniciosa FA553]
Length = 216
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 58/103 (56%), Gaps = 24/103 (23%)
Query: 61 NREEVDSRSVFVGNQ----------HFQSCGTVNRVTIRTDKF-GQPKG----------Y 99
++ D+RS++VGN HF +CGT+NRVTI DKF G PKG Y
Sbjct: 76 DKTGADNRSIYVGNTTVRHPEDIQGHFSACGTINRVTILCDKFTGHPKGNSITEMFSKRY 135
Query: 100 AYVEFLQSEAVQEALHLNESELHGRQLK---VTVKRTNVPGMK 139
AYVEF + E V AL ++ S HGR +K VT KRTNVPG
Sbjct: 136 AYVEFAEPEHVDTALTMDNSLFHGRLIKVQPVTAKRTNVPGFN 178
>gi|351698678|gb|EHB01597.1| Polyadenylate-binding protein 2 [Heterocephalus glaber]
Length = 118
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 66/117 (56%), Gaps = 15/117 (12%)
Query: 30 EEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVGN-----------Q 75
EEA L+++ ++ +M P G S+ R E D+RS++VGN
Sbjct: 2 EEAEKLKELQNEIEKQMNMSPPPGNAGPVIMSIEERMETDARSIYVGNVDYGATAEELEA 61
Query: 76 HFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVK 131
HF CG+VN VTI DKF G PKG+AY++F E+V+ +L L+ES GRQ+KV K
Sbjct: 62 HFHGCGSVNYVTILCDKFSGHPKGFAYMKFSDKESVRTSLALDESLFRGRQIKVIPK 118
>gi|335289034|ref|XP_003126854.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Sus
scrofa]
Length = 285
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 77/152 (50%), Gaps = 30/152 (19%)
Query: 17 ELDDMKIRLKEMEE--------------EATAL---RQMHAKVGNEMASKQDPAAGGSSL 59
EL+ ++++L ME+ +A AL + + + G ++ P+ GG
Sbjct: 85 ELEAIRLKLWAMEQAQGPEPQPQQQEEEDAGALLAGQLLSPEAGRSQRARPGPSLGGWP- 143
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQS 107
+ E D RSV+VGN +F CG ++RVTI DKF G PKGYAY+EF
Sbjct: 144 QQKVEADHRSVYVGNVDYEGTARELEAYFNHCGEIHRVTILCDKFSGHPKGYAYIEFATE 203
Query: 108 EAVQEALHLNESELHGRQLKVTVKRTNVPGMK 139
+ Q A+ L+ S GR +KV KRTN PG+
Sbjct: 204 SSAQAAVELDNSVFRGRVIKVLPKRTNFPGIS 235
>gi|440908773|gb|ELR58758.1| Embryonic polyadenylate-binding protein 2, partial [Bos grunniens
mutus]
Length = 272
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 75/140 (53%), Gaps = 18/140 (12%)
Query: 17 ELDDMKIRLKEMEEE--ATALRQMHAKVGNEMA----SKQDPAAGGSSLANREEVDSRSV 70
EL+ +K++L ME+ R + G E A ++Q + S + E D RS+
Sbjct: 84 ELEAIKLKLWAMEQAQGPEPPRVQNLDEGEEAAGALLARQLLSPETDSPLEKAEADHRSI 143
Query: 71 FVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNE 118
+VGN +F CG ++RVTI DKF G PKGYAY+EF + Q A+ L++
Sbjct: 144 YVGNVDYGGTAQELEAYFNHCGEIHRVTILCDKFSGHPKGYAYIEFATESSAQAAVELDK 203
Query: 119 SELHGRQLKVTVKRTNVPGM 138
S GR +KV KRTN+PG+
Sbjct: 204 SIFRGRVIKVLPKRTNLPGI 223
>gi|349603101|gb|AEP99036.1| Polyadenylate-binding protein 2-like protein, partial [Equus
caballus]
Length = 113
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 76 HFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 134
HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+ES GRQ+KV KRTN
Sbjct: 8 HFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTN 67
Query: 135 VPGM 138
PG+
Sbjct: 68 RPGI 71
>gi|448522951|ref|XP_003868821.1| hypothetical protein CORT_0C05430 [Candida orthopsilosis Co 90-125]
gi|380353161|emb|CCG25917.1| hypothetical protein CORT_0C05430 [Candida orthopsilosis]
Length = 178
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 63/95 (66%), Gaps = 13/95 (13%)
Query: 59 LANREEVDSRSVFVGNQHFQS-----------CGTVNRVTIRTDKF-GQPKGYAYVEFLQ 106
LA +EEVDSRS++VGN +QS G + RVTI DK+ G PKGYAYVEF +
Sbjct: 25 LAKQEEVDSRSIYVGNVDYQSTPEQLEEFFHVVGVIERVTILFDKYSGLPKGYAYVEFEK 84
Query: 107 SEAVQEALH-LNESELHGRQLKVTVKRTNVPGMKQ 140
E+V +A+ L+ E GR+++VT KRTN+PG ++
Sbjct: 85 IESVNKAVEDLHGKEFRGREVRVTPKRTNLPGFRK 119
>gi|67592644|ref|XP_665658.1| poly(A) binding protein II [Cryptosporidium hominis TU502]
gi|54656446|gb|EAL35428.1| poly(A) binding protein II [Cryptosporidium hominis]
Length = 263
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 18/125 (14%)
Query: 25 LKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN---------- 74
L ++ + + + + VG M P + A+ EE+ RS+++GN
Sbjct: 74 LFDLSDNKSLNDESNKNVGESMMDTDLPGS-----ADDEEM-KRSIYIGNVDYGTKLTEL 127
Query: 75 -QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKR 132
F+SCG++NR+TI DK G PKG+AY+EF + EAV+ AL + + GRQ+KV+ KR
Sbjct: 128 QDLFKSCGSINRITIMNDKRTGMPKGFAYLEFCEPEAVETALKFDGAMFRGRQIKVSTKR 187
Query: 133 TNVPG 137
N+PG
Sbjct: 188 KNIPG 192
>gi|66475216|ref|XP_627424.1| Sgn1p-like RRM domain containing protein [Cryptosporidium parvum
Iowa II]
gi|46228897|gb|EAK89746.1| Sgn1p-like RRM domain containing protein [Cryptosporidium parvum
Iowa II]
Length = 262
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 18/125 (14%)
Query: 25 LKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN---------- 74
L ++ + + + + VG M P + A+ EE+ RS+++GN
Sbjct: 73 LFDLSDNKSLNDESNKNVGESMMDTDLPGS-----ADDEEM-KRSIYIGNVDYGTKLTEL 126
Query: 75 -QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKR 132
F+SCG++NR+TI DK G PKG+AY+EF + EAV+ AL + + GRQ+KV+ KR
Sbjct: 127 QDLFKSCGSINRITIMNDKRTGMPKGFAYLEFCEPEAVETALKFDGAMFRGRQIKVSTKR 186
Query: 133 TNVPG 137
N+PG
Sbjct: 187 KNIPG 191
>gi|154341861|ref|XP_001566882.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064207|emb|CAM40405.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 214
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 77/145 (53%), Gaps = 18/145 (12%)
Query: 13 NKQVELDDMKIRLKEMEEE--ATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSV 70
+ + EL++MK ++ ++E+ AL++ AK +E K AAGGSS R S+
Sbjct: 24 DAEAELEEMKRQVDSLQEDMQLKALQESAAK--DEGTRKTAAAAGGSSGQARTNT---SI 78
Query: 71 FVGNQH-----------FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNES 119
FVG+ F SCG + RVT+ D+ G PKG AYVEF Q A+ +
Sbjct: 79 FVGDLDLRTTDADLRVFFASCGAITRVTVLKDRQGNPKGTAYVEFETEAQAQAAVLKDGQ 138
Query: 120 ELHGRQLKVTVKRTNVPGMKQHRPR 144
LHG+ L+V +KR N+P ++ PR
Sbjct: 139 SLHGKPLRVAMKRDNIPAFQRGLPR 163
>gi|308479093|ref|XP_003101756.1| hypothetical protein CRE_12048 [Caenorhabditis remanei]
gi|308262666|gb|EFP06619.1| hypothetical protein CRE_12048 [Caenorhabditis remanei]
Length = 172
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 68/125 (54%), Gaps = 17/125 (13%)
Query: 27 EMEEEATALRQMHAKVGNEM-ASKQDPAAGGSSLANREEVDSRSVFVGN----------- 74
EME EA L+Q+ K+ M K P + ++ +D++S+FVGN
Sbjct: 4 EMEAEAKILKQIQTKLFESMNVGKMTP----PTEEEQKAIDAKSIFVGNVDYGATAEELE 59
Query: 75 QHFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRT 133
QHF CG + R TI DK + K +AYVEF + +V+ A+ +N S GRQ+ VT KRT
Sbjct: 60 QHFNGCGVIVRTTIPKDKMTKRQKNFAYVEFECAASVESAIVMNSSTFRGRQIVVTAKRT 119
Query: 134 NVPGM 138
N PGM
Sbjct: 120 NKPGM 124
>gi|115402163|ref|XP_001217158.1| polyadenylate-binding protein 2 [Aspergillus terreus NIH2624]
gi|114189004|gb|EAU30704.1| polyadenylate-binding protein 2 [Aspergillus terreus NIH2624]
Length = 185
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 70/130 (53%), Gaps = 22/130 (16%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN------ 74
MK R+ EME EA LR+M A + + + ++ ++EE+D+RS+FVGN
Sbjct: 29 MKRRVAEMESEAAKLREMQATLDQQSENLRE---------DKEEIDARSIFVGNVDYGAS 79
Query: 75 -----QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
HFQSCG++NRVTI DKF GQPKG LQS + + Q +V
Sbjct: 80 PEEIQAHFQSCGSINRVTILLDKFTGQPKGMP-TSNLQSPVWWPNSGVKRKCVPWSQSEV 138
Query: 129 TVKRTNVPGM 138
KRTN+PGM
Sbjct: 139 VPKRTNLPGM 148
>gi|6322191|ref|NP_012266.1| Sgn1p [Saccharomyces cerevisiae S288c]
gi|731904|sp|P40561.1|SGN1_YEAST RecName: Full=RNA-binding protein SGN1
gi|557850|emb|CAA86203.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151943159|gb|EDN61494.1| cytoplasmic RNA-binding protein [Saccharomyces cerevisiae YJM789]
gi|190406222|gb|EDV09489.1| RNA-binding protein SGN1 [Saccharomyces cerevisiae RM11-1a]
gi|285812648|tpg|DAA08547.1| TPA: Sgn1p [Saccharomyces cerevisiae S288c]
gi|346228212|gb|AEO21089.1| SGN1 [synthetic construct]
gi|349578952|dbj|GAA24116.1| K7_Sgn1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298723|gb|EIW09819.1| Sgn1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 250
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 12/106 (11%)
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQS 107
A++ E DSRS+FVGN HF+ CG + R+T+ D+ G PKGY Y+EF
Sbjct: 56 AHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESP 115
Query: 108 EAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQ 153
++AL LN EL G+++ V+ KRTN+PG +H + F +Q
Sbjct: 116 AYREKALQLNGGELKGKKIAVSRKRTNIPGFNRHYNSQNQYFQQWQ 161
>gi|323333070|gb|EGA74471.1| Sgn1p [Saccharomyces cerevisiae AWRI796]
Length = 250
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 12/106 (11%)
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQS 107
A++ E DSRS+FVGN HF+ CG + R+T+ D+ G PKGY Y+EF
Sbjct: 56 AHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESP 115
Query: 108 EAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQ 153
++AL LN EL G+++ V+ KRTN+PG +H + F +Q
Sbjct: 116 AYREKALQLNGGELKGKKIAVSRKRTNIPGFNRHYNSQNQYFQQWQ 161
>gi|256274155|gb|EEU09065.1| Sgn1p [Saccharomyces cerevisiae JAY291]
gi|259147260|emb|CAY80513.1| Sgn1p [Saccharomyces cerevisiae EC1118]
gi|323348162|gb|EGA82416.1| Sgn1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 250
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 12/106 (11%)
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQS 107
A++ E DSRS+FVGN HF+ CG + R+T+ D+ G PKGY Y+EF
Sbjct: 56 AHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESP 115
Query: 108 EAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQ 153
++AL LN EL G+++ V+ KRTN+PG +H + F +Q
Sbjct: 116 AYREKALQLNGGELKGKKIAVSRKRTNIPGFNRHYNSQNQYFQQWQ 161
>gi|341890455|gb|EGT46390.1| hypothetical protein CAEBREN_09794 [Caenorhabditis brenneri]
Length = 188
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 14/122 (11%)
Query: 27 EMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-----------Q 75
E+++E L++M K+ E+ + A SL ++E+D+RS+FVGN
Sbjct: 16 EIDQERLVLQEMQEKMAEEL--NRSGKATPPSLEEQKEIDARSIFVGNVDFGSTVDELEA 73
Query: 76 HFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 134
HF+ CG + R TI +KF Q K +AY+EF +V+ AL ++ES R++ VT KRTN
Sbjct: 74 HFKGCGVITRATIPKNKFSQRQKNFAYIEFEDKNSVEMALLMHESIFRDRKIVVTAKRTN 133
Query: 135 VP 136
VP
Sbjct: 134 VP 135
>gi|354548064|emb|CCE44800.1| hypothetical protein CPAR2_406030 [Candida parapsilosis]
Length = 173
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 59/90 (65%), Gaps = 12/90 (13%)
Query: 59 LANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQ 106
LA +EE DSRSV+VGN + F+ G ++RVTI DK+ G PKGYAYVEF
Sbjct: 26 LAKQEEADSRSVYVGNVDYKATPEQLEEFFRPVGVIDRVTILFDKYSGLPKGYAYVEFEN 85
Query: 107 SEAVQEALHLNESELHGRQLKVTVKRTNVP 136
E+V +A+ L+ E GR+++V+ KRTN+P
Sbjct: 86 IESVNKAVDLHGKEFRGREIRVSPKRTNIP 115
>gi|292616346|ref|XP_002662984.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
gi|292616348|ref|XP_002662985.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
Length = 163
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 12/90 (13%)
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 109
R + D RS++VGN +F SCG VNRVTI ++F G PKG+AY+EF E+
Sbjct: 31 RIDSDRRSIYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKGFAYIEFSDRES 90
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGMK 139
V+ A+ L+E+ GR +KV+ KRTN+PG
Sbjct: 91 VRTAMALDETLFRGRVIKVSPKRTNIPGFS 120
>gi|189521749|ref|XP_001923043.1| PREDICTED: polyadenylate-binding protein 2-B-like isoform 1 [Danio
rerio]
Length = 192
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 12/90 (13%)
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 109
R + D RS++VGN +F SCG VNRVTI ++F G PKG+AY+EF E+
Sbjct: 60 RIDSDRRSIYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKGFAYIEFSDRES 119
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGMK 139
V+ A+ L+E+ GR +KV+ KRTN+PG
Sbjct: 120 VRTAMALDETLFRGRVIKVSPKRTNIPGFS 149
>gi|68076033|ref|XP_679936.1| RNA-binding protein [Plasmodium berghei strain ANKA]
gi|56500788|emb|CAH95197.1| RNA-binding protein, putative [Plasmodium berghei]
Length = 172
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 77/147 (52%), Gaps = 18/147 (12%)
Query: 10 ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRS 69
E EN + DD+ KE + L+ M+ G EM Q A + +EE+++RS
Sbjct: 12 EEENFRAHDDDINNIDKEFSD-LQKLKMMND--GAEMQMNQTGAPDSHEME-QEEINNRS 67
Query: 70 VFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLN 117
+FVGN F CG +NRVTI +K G KGYAY+EF +V+ AL L+
Sbjct: 68 IFVGNVDYSTQPEELQSLFSECGIINRVTILVNKNTGHSKGYAYIEFADPSSVRTALSLS 127
Query: 118 ESELHGRQLKVTVKRTNVPGMKQHRPR 144
ES RQ+KV KR N+PG +RPR
Sbjct: 128 ESFFKKRQIKVCSKRRNIPGF--NRPR 152
>gi|308459121|ref|XP_003091886.1| hypothetical protein CRE_30229 [Caenorhabditis remanei]
gi|308254866|gb|EFO98818.1| hypothetical protein CRE_30229 [Caenorhabditis remanei]
Length = 183
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 17/125 (13%)
Query: 26 KEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN----------- 74
+E+E EA L+Q+ K+ +M P ++ +D++SVF+GN
Sbjct: 16 EELEAEAVVLKQIQNKLSEKMGMMTPPTE-----EEQKAIDAKSVFIGNVEYGATIEELE 70
Query: 75 QHFQSCGTVNRVTIRTDKFGQP-KGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRT 133
QHF+ CGT+ R TI DK + K +AY+EF S +V A+ +N S R++ VT KRT
Sbjct: 71 QHFKGCGTIVRTTIPKDKVTKKQKNFAYIEFESSASVDNAIVMNGSIFRDRKIVVTSKRT 130
Query: 134 NVPGM 138
N PGM
Sbjct: 131 NKPGM 135
>gi|296474988|tpg|DAA17103.1| TPA: ePABP2-like [Bos taurus]
Length = 271
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 75/150 (50%), Gaps = 37/150 (24%)
Query: 17 ELDDMKIRLKEME---------------EEATALRQMHAKVGNEMASKQDPAAGGSSLAN 61
EL+ +K++L ME EEAT A + ++ S + S
Sbjct: 84 ELEAIKLKLWAMEPGXPEPPRVQNLDEGEEATG-----ALLARQLLSPET-----DSPLE 133
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 109
+ E D RS++VGN +F CG +++VTI DKF G PKGYAY+EF +
Sbjct: 134 KAEADHRSIYVGNVDYGGTAQELEAYFNHCGEIHQVTILCDKFSGHPKGYAYIEFATESS 193
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGMK 139
Q A+ L++S GR +KV KRTN+PG+
Sbjct: 194 AQAAVELDKSIFRGRVIKVLPKRTNLPGIS 223
>gi|254581722|ref|XP_002496846.1| ZYRO0D09482p [Zygosaccharomyces rouxii]
gi|238939738|emb|CAR27913.1| ZYRO0D09482p [Zygosaccharomyces rouxii]
Length = 289
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 53/86 (61%), Gaps = 12/86 (13%)
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 111
E D+RS+FVGN +HF CG + R+T+ DK G PKGYAYV+F SE +
Sbjct: 78 EADARSIFVGNISPDVTPEIIEEHFAECGEIKRITLLHDKHTGVPKGYAYVQFESSEVQE 137
Query: 112 EALHLNESELHGRQLKVTVKRTNVPG 137
AL LN +EL G ++ V KRTN+PG
Sbjct: 138 NALKLNGTELKGNKINVYKKRTNLPG 163
>gi|389583077|dbj|GAB65813.1| RNA-binding protein, partial [Plasmodium cynomolgi strain B]
Length = 213
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 64/114 (56%), Gaps = 15/114 (13%)
Query: 43 GNEMASKQDPAAGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTD 91
G EM Q A + +EE+++RS+FVGN F CG +NRVTI +
Sbjct: 5 GAEMQMNQSGALDSHEM-EQEEINNRSIFVGNVDYSTQPEELQSLFSECGLINRVTILVN 63
Query: 92 K-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPR 144
K G KGYAY+EF + +V+ AL L+ES RQ+KV KR N+PG +RP+
Sbjct: 64 KNTGHSKGYAYIEFADASSVRTALSLSESFFKKRQIKVCSKRRNIPGF--NRPK 115
>gi|50414059|ref|XP_457358.1| DEHA2B09372p [Debaryomyces hansenii CBS767]
gi|49653023|emb|CAG85362.1| DEHA2B09372p [Debaryomyces hansenii CBS767]
Length = 190
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 59/91 (64%), Gaps = 13/91 (14%)
Query: 59 LANREEVDSRSVFVGNQHFQS-----------CGTVNRVTIRTDKF-GQPKGYAYVEFLQ 106
LA +EE+DSRSV+VGN +QS G + R+TI DK+ G PKGYAYVEF
Sbjct: 45 LAKQEEIDSRSVYVGNVDYQSTPEQLESFFKAVGVIERITILFDKYSGLPKGYAYVEFEI 104
Query: 107 SEAVQEAL-HLNESELHGRQLKVTVKRTNVP 136
E+V++A+ L+ E GR L+VT KRTN+P
Sbjct: 105 PESVEKAIEELHGKEFRGRDLRVTPKRTNLP 135
>gi|344228071|gb|EGV59957.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 242
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 56/92 (60%), Gaps = 13/92 (14%)
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 109
+EEVDSRSV+VGN + F S G + R+TI D+F G PKGYAY+EF E
Sbjct: 56 QEEVDSRSVYVGNVNFTSTPVQLEEFFHSVGVIERITILFDRFTGIPKGYAYIEFNSEEG 115
Query: 110 VQEAL-HLNESELHGRQLKVTVKRTNVPGMKQ 140
Q+A+ L+ R+LKVT KRTN PGM +
Sbjct: 116 AQKAISELDGKVFRNRELKVTAKRTNFPGMSR 147
>gi|67969697|dbj|BAE01197.1| unnamed protein product [Macaca fascicularis]
Length = 147
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 75/150 (50%), Gaps = 27/150 (18%)
Query: 58 SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 105
S+ + E D+RS++VGN HF CG+VNRVTI D+F G PKG+AY+EF
Sbjct: 2 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDEFSGHPKGFAYIEF- 60
Query: 106 QSEAVQE--ALHLNESELHGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQS 154
+ V+ +L L+ES G+++KV KRTN PG+ ++R R N S
Sbjct: 61 SDKGVRRGPSLALDESLFRGKEIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSS 117
Query: 155 RGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 184
R F P G R R YSPY
Sbjct: 118 RSRFYSGFNSRPRGRVYRGRARATSWYSPY 147
>gi|156082802|ref|XP_001608885.1| RNA binding protein [Babesia bovis T2Bo]
gi|154796135|gb|EDO05317.1| RNA binding protein, putative [Babesia bovis]
Length = 163
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 12/92 (13%)
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAV 110
+EVD RS++VGN + F++ G +NR+TI DK+ G+PKGYAY+EF +AV
Sbjct: 37 DEVDRRSIYVGNVDYSTKPHDLQEFFKASGQINRITIMVDKWTGKPKGYAYIEFASEDAV 96
Query: 111 QEALHLNESELHGRQLKVTVKRTNVPGMKQHR 142
A+ LN+ R +KV KR N+PG + R
Sbjct: 97 NNAVMLNDCLFKERIIKVIPKRKNIPGYNRKR 128
>gi|260784963|ref|XP_002587533.1| hypothetical protein BRAFLDRAFT_237106 [Branchiostoma floridae]
gi|229272681|gb|EEN43544.1| hypothetical protein BRAFLDRAFT_237106 [Branchiostoma floridae]
Length = 100
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 76 HFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 134
HF CG++NRVTI DKF G PKG+AY+EF ++++ A L++S GRQ+KV KRTN
Sbjct: 13 HFHGCGSINRVTILCDKFTGHPKGFAYIEFADKDSIETAKALDDSLFRGRQIKVVPKRTN 72
Query: 135 VPGM 138
PG+
Sbjct: 73 RPGV 76
>gi|126136038|ref|XP_001384543.1| hypothetical protein PICST_45495 [Scheffersomyces stipitis CBS
6054]
gi|126091741|gb|ABN66514.1| predicted protein, partial [Scheffersomyces stipitis CBS 6054]
Length = 155
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 61/93 (65%), Gaps = 13/93 (13%)
Query: 57 SSLANREEVDSRSVFVGNQHFQS-----------CGTVNRVTIRTDKF-GQPKGYAYVEF 104
+ LA +EE+D RS++VGN +QS G + RVTI D++ G PKGYAYVEF
Sbjct: 23 ARLAKQEEIDGRSIYVGNVDYQSTPEQLEEFFHVVGVIERVTILFDRYSGLPKGYAYVEF 82
Query: 105 LQSEAVQEALH-LNESELHGRQLKVTVKRTNVP 136
++E+V+ A+ L+ E GR+++V+ KRTN+P
Sbjct: 83 EKTESVERAIEDLHGKEFRGREIRVSAKRTNLP 115
>gi|448537326|ref|XP_003871310.1| cytoplasmic RNA-binding protein [Candida orthopsilosis Co 90-125]
gi|380355667|emb|CCG25185.1| cytoplasmic RNA-binding protein [Candida orthopsilosis]
Length = 216
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 58/93 (62%), Gaps = 13/93 (13%)
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQS 107
A R E D+RSV++GN QHF GTVNRVTI T+K GQPKG+AY+EF
Sbjct: 85 AERRESDARSVYIGNVDYPTTPLELQQHFSPAGTVNRVTIMTNKVTGQPKGFAYLEFSDV 144
Query: 108 EAVQEAL-HLNESELHGRQLKVTVKRTNVPGMK 139
+++ +A+ L+ S R LKV KRTN+PG+
Sbjct: 145 DSMNKAVATLDGSIFRDRPLKVLPKRTNIPGVN 177
>gi|209877356|ref|XP_002140120.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555726|gb|EEA05771.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 206
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 12/83 (14%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH 115
RS+++GN + F+SCG++NR+TI DK G PKG+AY+EF + EAV AL
Sbjct: 66 RSIYIGNVDYGTKPTELQELFKSCGSINRITIMNDKRTGMPKGFAYLEFCEPEAVDTALK 125
Query: 116 LNESELHGRQLKVTVKRTNVPGM 138
+ + GRQ+KV KR N+PG
Sbjct: 126 FDGAMFRGRQIKVCSKRKNIPGF 148
>gi|350585423|ref|XP_003356120.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Sus
scrofa]
Length = 285
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 75/152 (49%), Gaps = 30/152 (19%)
Query: 17 ELDDMKIRLKEMEE--------------EATAL---RQMHAKVGNEMASKQDPAAGGSSL 59
EL+ ++++L ME+ +A AL + + + G ++ P+ GG
Sbjct: 85 ELEAIRLKLWAMEQAQGPEPQPQQQEEEDAGALLAGQLLSPEAGRSQRARPGPSLGGWP- 143
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQS 107
+ E D RSV+VGN +F CG ++RVTI DKF G PKGYAY+EF
Sbjct: 144 QQKVEADHRSVYVGNVDYEGTARELEAYFNHCGEIHRVTILCDKFSGHPKGYAYIEFATE 203
Query: 108 EAVQEALHLNESELHGRQLKVTVKRTNVPGMK 139
+ Q + L+ S G +KV KRTN PG+
Sbjct: 204 SSAQAPVELDNSVFRGPVIKVLPKRTNFPGIS 235
>gi|431838574|gb|ELK00506.1| Embryonic polyadenylate-binding protein 2 [Pteropus alecto]
Length = 308
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 24/155 (15%)
Query: 17 ELDDMKIRLKEMEEE-------ATALRQMHAKVGNEMASKQ-DPAAG---GSSLANREEV 65
EL+ +K++L ME+ A AL + G +A + P G + + EV
Sbjct: 124 ELESIKLKLWAMEQAQGPEPPRAQALAEKEESSGAMLAQQLLSPETGRPYPGTPVEKMEV 183
Query: 66 DSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEA 113
D RS++VGN +F CG V RVTI DKF G PKGYAYVEF +VQ A
Sbjct: 184 DHRSIYVGNVDYGGTAKELEAYFNHCGEVQRVTILCDKFSGHPKGYAYVEFASESSVQAA 243
Query: 114 LHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNP 148
+ L+ES GR +KV V + PG + P P
Sbjct: 244 VELDESIFRGRVIKVHVPHES-PGHLEDALHTPPP 277
>gi|297284668|ref|XP_001100533.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Macaca
mulatta]
Length = 322
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 71/148 (47%), Gaps = 19/148 (12%)
Query: 51 DPAAGGSSLAN----REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-G 94
P A G L + E D RSV+VGN HF CG V+RVTI DKF G
Sbjct: 139 SPEATGCPLPGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSGCGEVHRVTILCDKFSG 198
Query: 95 QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQ--HRPRRPNPFMVY 152
PKGYAY+EF +VQ A+ L++S GR +KV PG+ + + P P +
Sbjct: 199 HPKGYAYIEFATKGSVQAAVELDQSLFRGRVIKVRQCSPGAPGVFKVLEKLSSPGPVLEP 258
Query: 153 QSRGAIIPPFLYSPYGYGKIPRFRMPMR 180
RG ++ +L ++P P+R
Sbjct: 259 ALRGGLL-SWLSLDCWTPRLPAALTPLR 285
>gi|308459095|ref|XP_003091873.1| hypothetical protein CRE_30215 [Caenorhabditis remanei]
gi|308254853|gb|EFO98805.1| hypothetical protein CRE_30215 [Caenorhabditis remanei]
Length = 182
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 12/123 (9%)
Query: 28 MEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-----------QH 76
MEEE A ++ ++ N ++ K + + ++ +D++S+FVGN H
Sbjct: 13 MEEELQAEARVLKEIQNRLSEKMEIGKLTPTEEEQKAIDAKSIFVGNVDYGATVEELEAH 72
Query: 77 FQSCGTVNRVTIRTDKFGQP-KGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV 135
F CGT+ R TI DKF + K +AY+EF +V+ A +N S GRQ+ VT KRTN
Sbjct: 73 FMGCGTIVRTTIPKDKFTKKQKNFAYIEFESVASVENATVMNASIFRGRQIVVTAKRTNK 132
Query: 136 PGM 138
PG+
Sbjct: 133 PGL 135
>gi|428173619|gb|EKX42520.1| hypothetical protein GUITHDRAFT_88058 [Guillardia theta CCMP2712]
Length = 213
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 19/142 (13%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGG--SSLA-----NREEVDSRS 69
EL M+ L + E++ L +++ + G+ A D +GG S L+ ++ E DSRS
Sbjct: 33 ELAQMQKELAKAEQQKAELDKLNKQQGSGSAGSADGKSGGEDSELSAAAAADQAERDSRS 92
Query: 70 VFVGNQHFQS-----------CGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLN 117
+F+GN F + CG +N +TI DKF G+ KG+AY+EF +V A+ N
Sbjct: 93 IFIGNVDFAASVEEVQALFADCGEINAITIPVDKFTGRAKGFAYLEFADKASVLMAMEKN 152
Query: 118 ESELHGRQLKVTVKRTNVPGMK 139
+ L R +KV KRTN+P +
Sbjct: 153 NALLRDRAIKVVNKRTNLPSWQ 174
>gi|308459109|ref|XP_003091880.1| hypothetical protein CRE_30217 [Caenorhabditis remanei]
gi|308254860|gb|EFO98812.1| hypothetical protein CRE_30217 [Caenorhabditis remanei]
Length = 205
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 68/129 (52%), Gaps = 23/129 (17%)
Query: 26 KEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE----VDSRSVFVGN------- 74
+E+E EA LR + ++ M G ++ EE +D+RSVFVGN
Sbjct: 37 EEIEAEAKVLRDIQNRLSESMEI-------GKTVPPTEEEQKAIDARSVFVGNVDFGSTI 89
Query: 75 ----QHFQSCGTVNRVTIRTDKFGQP-KGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 129
HF+ CG + R+TI DK + K +AYVEF S +V+ A+ +N S RQ+ VT
Sbjct: 90 EELEAHFKGCGEIVRITIPKDKLTKKQKNFAYVEFESSASVENAMVMNGSAFRERQIVVT 149
Query: 130 VKRTNVPGM 138
KRTN PGM
Sbjct: 150 AKRTNKPGM 158
>gi|406607797|emb|CCH40902.1| Embryonic polyadenylate-binding protein 2 [Wickerhamomyces
ciferrii]
Length = 228
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 46/151 (30%)
Query: 30 EEATALRQMHAKVGNEMASKQDPA------------------------AGGSSLANR--- 62
E+ L++ HA +G E+A QD A G S +NR
Sbjct: 4 EQPEILKEQHATIGQELA--QDYAEYIGDDGTPIPQQSQDQQDQQQEHKGFQSRSNRSPE 61
Query: 63 -----EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 105
+E DSRSV++GN + F GT+NRVTI D+F G+PKGYAYVEF
Sbjct: 62 EIEAQKETDSRSVYIGNVDYNTTPEELEEFFSKIGTINRVTILFDRFTGRPKGYAYVEFE 121
Query: 106 QSEAVQEALHLNESELHGRQLKVTVKRTNVP 136
+V A+ L+ E R + V +KRTNVP
Sbjct: 122 SQSSVDSAIGLSGQEFKDRIISVNIKRTNVP 152
>gi|254568026|ref|XP_002491123.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|238030920|emb|CAY68843.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|328352350|emb|CCA38749.1| Embryonic polyadenylate-binding protein 2 [Komagataella pastoris
CBS 7435]
Length = 293
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 66/118 (55%), Gaps = 17/118 (14%)
Query: 44 NEMASKQDPAA----GGSSLANREEVDSRSVFVGNQHFQS-----------CGTVNRVTI 88
NE++ K +P G AN+ ++D RSVFVGN H + G VNRVTI
Sbjct: 101 NEISPKPEPTPKLKLGEFQPANQADIDKRSVFVGNVHSSADPEELVQIMTKAGVVNRVTI 160
Query: 89 RTDKF-GQPKGYAYVEFLQSEAVQEALHL-NESELHGRQLKVTVKRTNVPGMKQHRPR 144
D + G PKGYAYVEF + +V +A+ L ++ ++L V KRTNVPG+ + PR
Sbjct: 161 LLDHYTGHPKGYAYVEFEEEASVPKAIELFHQYVFKEKELNVVPKRTNVPGLAKRHPR 218
>gi|351712927|gb|EHB15846.1| Embryonic polyadenylate-binding protein 2 [Heterocephalus glaber]
Length = 308
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 77/172 (44%), Gaps = 53/172 (30%)
Query: 18 LDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPA-----------AGGSSLANRE--E 64
L+ +K++L ME+ A + E+A++++ A G +A RE E
Sbjct: 95 LEAIKLKLWTMEQAQGAPEPPSKQ---ELATEEEGARARQLLSPETVGGPFPVAPRETVE 151
Query: 65 VDSRSVFVGNQ------------------------------------HFQSCGTVNRVTI 88
D RS++VGN HF CG V+RVTI
Sbjct: 152 ADHRSIYVGNSECYCTGSWAPSPLCAENTGAVPGQVDYGGTAEELQAHFHPCGEVHRVTI 211
Query: 89 RTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK 139
DKF G PKGYAYVEF + Q A+ L+ES GR +KV KRTN PG+
Sbjct: 212 LCDKFSGHPKGYAYVEFTTQLSAQAAVELDESIFRGRVIKVLPKRTNFPGIS 263
>gi|354544353|emb|CCE41076.1| hypothetical protein CPAR2_300650 [Candida parapsilosis]
Length = 217
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 13/90 (14%)
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 109
R + D+RS+++GN +HF G VNRVTI T+K GQPKG+AY+EF E
Sbjct: 88 RRDSDARSIYIGNVDYQATPLELQEHFSPAGIVNRVTIMTNKITGQPKGFAYMEFSDVEG 147
Query: 110 VQEAL-HLNESELHGRQLKVTVKRTNVPGM 138
V A+ L++S R+LKV KRTN+PG+
Sbjct: 148 VNAAVKELDDSVFRDRRLKVLPKRTNIPGI 177
>gi|403357954|gb|EJY78612.1| RNA-binding protein, putative [Oxytricha trifallax]
gi|403360696|gb|EJY80032.1| RNA-binding protein, putative [Oxytricha trifallax]
gi|403365989|gb|EJY82785.1| RNA-binding protein, putative [Oxytricha trifallax]
gi|403375247|gb|EJY87595.1| RNA-binding protein, putative [Oxytricha trifallax]
Length = 183
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 52/91 (57%), Gaps = 12/91 (13%)
Query: 58 SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFL 105
S ++E+ D RSVFV N HF+ CG V RVTI DK Q PKG+A++EF
Sbjct: 53 SKEDQEDADERSVFVKNVDYSAEPAELKDHFKECGEVKRVTIPVDKASQQPKGHAFIEFT 112
Query: 106 QSEAVQEALHLNESELHGRQLKVTVKRTNVP 136
EA Q+A L +S GRQ+ V KR N+P
Sbjct: 113 TIEAAQKAKRLTDSLFKGRQITVIPKRKNIP 143
>gi|268536758|ref|XP_002633514.1| Hypothetical protein CBG05376 [Caenorhabditis briggsae]
Length = 182
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 12/87 (13%)
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQP-KGYAYVEFLQSEA 109
++E+DSRSVF+GN +HF+ CG + R TI DKF + K +AY+EF +E+
Sbjct: 47 QKEIDSRSVFIGNVDFGSSIEDIEEHFKGCGEIIRTTIPKDKFTKKQKNFAYIEFASAES 106
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVP 136
++ AL +N S RQ+ VT KRTN P
Sbjct: 107 IENALVMNGSLFRSRQIVVTAKRTNKP 133
>gi|268536756|ref|XP_002633513.1| Hypothetical protein CBG05375 [Caenorhabditis briggsae]
Length = 180
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 12/87 (13%)
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQP-KGYAYVEFLQSEA 109
++E+DSRSVF+GN +HF+ CG + R TI DKF + K +AY+EF +E+
Sbjct: 48 QKEIDSRSVFIGNVDFGSSIEDIEEHFKGCGEIIRTTIPKDKFTKKQKNFAYIEFASAES 107
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVP 136
++ AL +N S RQ+ VT KRTN P
Sbjct: 108 IENALVMNGSLFRSRQIVVTAKRTNKP 134
>gi|17532829|ref|NP_495021.1| Protein EEED8.12 [Caenorhabditis elegans]
gi|2500592|sp|Q09301.1|YQOC_CAEEL RecName: Full=Putative RNA-binding protein EEED8.12
gi|351060993|emb|CCD68740.1| Protein EEED8.12 [Caenorhabditis elegans]
Length = 197
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 70/125 (56%), Gaps = 17/125 (13%)
Query: 27 EMEEEATALRQMHAKVGNEMASKQDPAA-GGSSLANREEVDSRSVFVGN----------- 74
E+E E+ L Q+ N+MA + AA + ++ +D++SVF+GN
Sbjct: 23 EIEAESAILEQIQ----NKMAKNLESAAYVPPTEEEQKAIDAKSVFIGNVDFNSTIEEVE 78
Query: 75 QHFQSCGTVNRVTIRTDKFGQP-KGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRT 133
+HF+ CG + R TI DKF + K +AY+EF S +++ AL +N S R + VT KRT
Sbjct: 79 EHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGSLFRSRPIVVTAKRT 138
Query: 134 NVPGM 138
N+PGM
Sbjct: 139 NIPGM 143
>gi|71993551|ref|NP_500666.2| Protein T08B6.5 [Caenorhabditis elegans]
gi|373220496|emb|CCD73994.1| Protein T08B6.5 [Caenorhabditis elegans]
Length = 177
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 12/89 (13%)
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 109
+E+ D+RSV+VGN +HF CG V RVTI DKF G K +A+VEF + E+
Sbjct: 40 QEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLES 99
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGM 138
VQ AL L+ + R++ VT+KRTN PGM
Sbjct: 100 VQLALVLSGTMFRNRKIMVTLKRTNKPGM 128
>gi|385302465|gb|EIF46595.1| polyadenylate-binding protein 2 [Dekkera bruxellensis AWRI1499]
Length = 234
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 12/90 (13%)
Query: 61 NREEVDSRSVFVGNQHFQS-----------CGTVNRVTIRTDKF-GQPKGYAYVEFLQSE 108
N+ E+D RSV+VGN + + CG +NR+TI + + G+ KG+AYVEF E
Sbjct: 75 NQREIDRRSVYVGNIDYSATTADLKKVLDDCGEINRITILYNHYTGRSKGFAYVEFNDVE 134
Query: 109 AVQEALHLNESELHGRQLKVTVKRTNVPGM 138
+ A+ LN +EL+ R L + KRTN+PGM
Sbjct: 135 GAKAAIELNGTELYSRALTIQQKRTNIPGM 164
>gi|115533906|ref|NP_495022.2| Protein EEED8.4 [Caenorhabditis elegans]
gi|114152917|sp|Q09295.2|YQO4_CAEEL RecName: Full=Putative RNA-binding protein EEED8.4
gi|351060984|emb|CCD68731.1| Protein EEED8.4 [Caenorhabditis elegans]
Length = 191
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 15/124 (12%)
Query: 27 EMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-----------Q 75
E+E E+ L+Q+ K+ + S A + ++ +D++SVF+GN +
Sbjct: 17 EIEAESAILQQIQNKMAKHLES---AAYVPPTEEEQKAIDAKSVFIGNVDFNSTIEEIEE 73
Query: 76 HFQSCGTVNRVTIRTDKFGQP-KGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 134
HF+ CG + + TI DKF + K +AY+EF S +++ AL +N S R + VT KRTN
Sbjct: 74 HFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGSLFRSRPIVVTAKRTN 133
Query: 135 VPGM 138
+PGM
Sbjct: 134 IPGM 137
>gi|45187874|ref|NP_984097.1| ADR001Cp [Ashbya gossypii ATCC 10895]
gi|27475785|gb|AAO16965.1|AF384990_2 Yib1 [Eremothecium gossypii]
gi|44982658|gb|AAS51921.1| ADR001Cp [Ashbya gossypii ATCC 10895]
gi|374107313|gb|AEY96221.1| FADR001Cp [Ashbya gossypii FDAG1]
Length = 324
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 20/164 (12%)
Query: 5 DMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE 64
D + +TE+ E DM K ++E ++ + + P + A + E
Sbjct: 26 DEQLADTEDSSWE-QDMSSDSKGDQDEQSSYNSL-----DSTTPVSQPLSKDRKHAKQVE 79
Query: 65 VDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQE 112
+DSRSVFV + +HF+ G ++R+TI +K G+PKGYAY++F +V++
Sbjct: 80 LDSRSVFVSSITPEATAEMLEEHFKDVGVISRITILYNKKTGEPKGYAYIQFESISSVEK 139
Query: 113 ALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRG 156
AL L+ S +G + V KRTN+PG +RP P+ + + G
Sbjct: 140 ALQLDGSSFNGNTISVAKKRTNLPGF--NRPFNYYPYQQFHAHG 181
>gi|149240135|ref|XP_001525943.1| hypothetical protein LELG_02501 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450066|gb|EDK44322.1| hypothetical protein LELG_02501 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 224
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 58/95 (61%), Gaps = 13/95 (13%)
Query: 59 LANREEVDSRSVFVGNQHFQS-----------CGTVNRVTIRTDKF-GQPKGYAYVEFLQ 106
LA +EE D RSV+VGN +QS G V RVTI DKF G PKGYAYVEF
Sbjct: 57 LAKQEETDLRSVYVGNVDYQSTPEQIEELFHKVGIVERVTILFDKFSGLPKGYAYVEFQT 116
Query: 107 SEAVQEAL-HLNESELHGRQLKVTVKRTNVPGMKQ 140
E ++A+ L+ GR+L+V+ KRTN+PG ++
Sbjct: 117 PENAKKAVEELHGESFRGRELRVSEKRTNLPGFRK 151
>gi|357457685|ref|XP_003599123.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
gi|355488171|gb|AES69374.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
Length = 685
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 92/187 (49%), Gaps = 29/187 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVG----NEMASKQDPAAGGSSLANR--EEVDSRSV 70
E+ D + ++ ++E A AL+ + V + S + GSS+A R E+VDSR++
Sbjct: 454 EIGDSRSNMQLVKENANALKISNGNVNLAPDVQKESSKAHCTPGSSVAGRPTEDVDSRTI 513
Query: 71 FVGNQHFQSC-----------GTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNE 118
FV N HF + G V +V I TD GQPKG AYVEF+ EA AL L+
Sbjct: 514 FVSNVHFAATKDALSRHFNKFGEVLKVIIVTDAATGQPKGAAYVEFMLKEAADNALSLDG 573
Query: 119 SELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPP--FLYSPYGYGKIP--- 173
+ R LKV VK++ P ++ P P + RG+ P F P+ G IP
Sbjct: 574 TSFMSRILKV-VKKSAAPAQQESAPTTTWPHV----RGSPFPTARFPRPPFARG-IPGSF 627
Query: 174 RFRMPMR 180
R R PM+
Sbjct: 628 RPRPPMK 634
>gi|255716954|ref|XP_002554758.1| KLTH0F13090p [Lachancea thermotolerans]
gi|238936141|emb|CAR24321.1| KLTH0F13090p [Lachancea thermotolerans CBS 6340]
Length = 145
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 76/136 (55%), Gaps = 14/136 (10%)
Query: 25 LKEMEEEATALRQMHAKVGNEMASKQDPAAGGSS--LANREEVDSRSVFVGN-------- 74
L + E R++ A +++ S+ S ++ + + D+RS+F+ N
Sbjct: 10 LTYLNEWNMNTRKIQASTPHKVKSQSCKVVSKSENEISEQRKTDARSIFLRNIPVDISIN 69
Query: 75 ---QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVK 131
HF+ GT+NRVTI T++ GYAY+EF + + +AL LN SEL G +++VT K
Sbjct: 70 LLEDHFKLYGTINRVTIFTNRKTFNLGYAYIEFEEDCSADQALDLNNSELCGHKIEVTKK 129
Query: 132 RTNVPGMKQHRPRRPN 147
RTN+PG+++ +P + N
Sbjct: 130 RTNLPGIRR-KPYKKN 144
>gi|344237967|gb|EGV94070.1| Embryonic polyadenylate-binding protein 2 [Cricetulus griseus]
Length = 306
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 72/150 (48%), Gaps = 28/150 (18%)
Query: 6 MDMIETENK------QVELDDMKIRLKEME------EEATALRQMHAKVGNEMASKQDPA 53
+ ++E EN EL+ +K++L ME E+ R+ + G E+ P
Sbjct: 66 LSLLEQENLAKSPGYNQELEAIKLKLWAMEHAETLPEQPYVQRKATEEKGAEVGQLLSPE 125
Query: 54 AGGSSLAN----REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPK 97
G + E D RSV+VGN +F CG ++RVTI DKF G PK
Sbjct: 126 IMGCFFPGTPKEKVEADHRSVYVGNVDYGGSAAELRAYFSPCGEIHRVTILCDKFSGHPK 185
Query: 98 GYAYVEFLQSEAVQEALHLNESELHGRQLK 127
GYAY+EF +VQ A+ L+ES GR +K
Sbjct: 186 GYAYIEFASQNSVQAAVELDESTFRGRVIK 215
>gi|326427875|gb|EGD73445.1| hypothetical protein PTSG_05149 [Salpingoeca sp. ATCC 50818]
Length = 242
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 49/90 (54%), Gaps = 11/90 (12%)
Query: 58 SLANREEVDSRSVFVGNQH-----------FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQ 106
S +REE D RSVFV N F+ CG V R+TI GQPKG+AYVEF
Sbjct: 111 SQESREEADRRSVFVQNVDYGTSEVDLQLFFKDCGPVRRITIGRGPTGQPKGFAYVEFTD 170
Query: 107 SEAVQEALHLNESELHGRQLKVTVKRTNVP 136
AV+ A L L GRQ+ V KRTNVP
Sbjct: 171 EAAVETAKGLTNQMLKGRQVTVLNKRTNVP 200
>gi|413952636|gb|AFW85285.1| hypothetical protein ZEAMMB73_728520 [Zea mays]
Length = 105
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 56/79 (70%), Gaps = 7/79 (8%)
Query: 1 MEGDDMDMIETEN--KQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSS 58
++G+D+DM ++ K ELD+MK RLKEMEEEA ALR+M AKV +M QDP A S
Sbjct: 15 VDGEDVDMSAGDDATKLQELDEMKRRLKEMEEEAAALREMQAKVAKDM---QDPNATTSE 71
Query: 59 LANREEVDSRSVFVGNQHF 77
N+EE+DSRSVFVGN F
Sbjct: 72 --NKEEMDSRSVFVGNVSF 88
>gi|255725524|ref|XP_002547691.1| hypothetical protein CTRG_01998 [Candida tropicalis MYA-3404]
gi|240135582|gb|EER35136.1| hypothetical protein CTRG_01998 [Candida tropicalis MYA-3404]
Length = 137
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 13/93 (13%)
Query: 59 LANREEVDSRSVFVGNQHFQS-----------CGTVNRVTIRTDKF-GQPKGYAYVEFLQ 106
L ++E+D+RSV+VGN +QS G + RVTI D+F G PKGYAY+EF
Sbjct: 20 LEKQQEIDNRSVYVGNVDYQSTPEQLEEFFHVVGVIERVTILFDRFSGLPKGYAYIEFET 79
Query: 107 SEAVQEALH-LNESELHGRQLKVTVKRTNVPGM 138
E+ +A+ L+ E GR L+++ KRTN+PG
Sbjct: 80 EESAVKAIEELDGKEFKGRALRISKKRTNLPGF 112
>gi|363752247|ref|XP_003646340.1| hypothetical protein Ecym_4483 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889975|gb|AET39523.1| hypothetical protein Ecym_4483 [Eremothecium cymbalariae
DBVPG#7215]
Length = 355
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 12/91 (13%)
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQS 107
A + E+D+RS+FV + HF+ G +NR+TI +K G+PKGYAY+EF
Sbjct: 75 AKQVELDTRSIFVSSITPETTAETLETHFKDVGMINRITILHNKRTGEPKGYAYIEFEMV 134
Query: 108 EAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
E+V +AL LN SE + + + V KRTN+PG
Sbjct: 135 ESVAKALELNGSEFNNKIITVAKKRTNLPGF 165
>gi|308459099|ref|XP_003091875.1| hypothetical protein CRE_30220 [Caenorhabditis remanei]
gi|308254855|gb|EFO98807.1| hypothetical protein CRE_30220 [Caenorhabditis remanei]
Length = 188
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 54/89 (60%), Gaps = 12/89 (13%)
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQP-KGYAYVEFLQSEA 109
++E+D+RS+F+GN HF+ CG + R TI DK + K YA++EF S++
Sbjct: 49 QKEIDARSIFIGNVEFGATVEELEDHFKGCGEIVRTTIPKDKLTKKQKNYAFIEFESSDS 108
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVPGM 138
V+ A+ +N S RQ+ VT KRTN PGM
Sbjct: 109 VENAMVMNGSTFRERQIVVTSKRTNKPGM 137
>gi|293332605|ref|NP_001170249.1| uncharacterized protein LOC100384205 [Zea mays]
gi|224034597|gb|ACN36374.1| unknown [Zea mays]
gi|413952638|gb|AFW85287.1| hypothetical protein ZEAMMB73_728520 [Zea mays]
Length = 127
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 55/76 (72%), Gaps = 7/76 (9%)
Query: 1 MEGDDMDMIETEN--KQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSS 58
++G+D+DM ++ K ELD+MK RLKEMEEEA ALR+M AKV +M QDP A S
Sbjct: 15 VDGEDVDMSAGDDATKLQELDEMKRRLKEMEEEAAALREMQAKVAKDM---QDPNATTSE 71
Query: 59 LANREEVDSRSVFVGN 74
N+EE+DSRSVFVGN
Sbjct: 72 --NKEEMDSRSVFVGN 85
>gi|359075107|ref|XP_002694906.2| PREDICTED: embryonic polyadenylate-binding protein 2 [Bos taurus]
Length = 319
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 57/98 (58%), Gaps = 8/98 (8%)
Query: 50 QDPAAGGS------SLANREEVD-SRSVFVGNQHFQSCGTVNRVTIRTDKF-GQPKGYAY 101
Q+P GG ++A+ +VD + +F CG ++RVTI DKF G PKGYAY
Sbjct: 174 QEPLGGGGQCTRPPTMAHAWQVDYGGTAQELEAYFNHCGEIHRVTILCDKFSGHPKGYAY 233
Query: 102 VEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK 139
+EF + Q A+ L++S GR +KV KRTN+PG+
Sbjct: 234 IEFATESSAQAAVELDKSIFRGRVIKVLPKRTNLPGIS 271
>gi|308459113|ref|XP_003091882.1| hypothetical protein CRE_30214 [Caenorhabditis remanei]
gi|308254862|gb|EFO98814.1| hypothetical protein CRE_30214 [Caenorhabditis remanei]
Length = 186
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 75/146 (51%), Gaps = 27/146 (18%)
Query: 6 MDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE- 64
M +I+ + +D+ E++ EA L+Q+ N +A+K + G L EE
Sbjct: 1 MALIDNNSNFCSMDE------ELQAEAVVLKQIQ----NRLAAKME--MGKVCLPTEEEQ 48
Query: 65 --VDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAV 110
+D++S+FVGN HF+ CG + R TI DK + K +AYVEF + +V
Sbjct: 49 KVIDAKSIFVGNVEYGATTEELEDHFKGCGEIVRTTIPKDKMTNRQKNFAYVEFECAASV 108
Query: 111 QEALHLNESELHGRQLKVTVKRTNVP 136
+ A+ +N S GR + VT KRTN P
Sbjct: 109 ENAILMNGSTFRGRPIVVTAKRTNKP 134
>gi|294460473|gb|ADE75814.1| unknown [Picea sitchensis]
Length = 485
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 64/127 (50%), Gaps = 15/127 (11%)
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAV 110
E+ DSR+VFV N +HF CG V +V + TD GQPKG AY+EF E
Sbjct: 293 EDADSRTVFVSNVHFAATKEAITKHFSRCGEVVKVIMLTDVATGQPKGSAYIEFSCRETA 352
Query: 111 QEALHLNESELHGRQLKVTVKRTN--VPGMKQHRP-RRPNPFMVYQSRGAIIPPFLYSPY 167
+ AL LNE+ R LKV K + P + P RRP P+ ++ A+ L S Y
Sbjct: 353 EIALTLNETSFMSRMLKVVRKNASHVEPSIIARPPLRRPLPYSAWRPTRAVYGRGLASTY 412
Query: 168 GYGKIPR 174
G +PR
Sbjct: 413 RRGYMPR 419
>gi|308459125|ref|XP_003091888.1| hypothetical protein CRE_30216 [Caenorhabditis remanei]
gi|308254868|gb|EFO98820.1| hypothetical protein CRE_30216 [Caenorhabditis remanei]
Length = 185
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 68/134 (50%), Gaps = 17/134 (12%)
Query: 18 LDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE---VDSRSVFVGN 74
L D + MEEE A + ++ N +A+K + G L EE +DSRSVFVGN
Sbjct: 3 LIDNNSNMCSMEEELQAEAVVLKQIQNSLAAKME--IGKVCLPTEEEQKAIDSRSVFVGN 60
Query: 75 -----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 122
HF+ CG + R TI DK + K +AY+EF + +V+ A +N S
Sbjct: 61 VEFGATVEELETHFKGCGEIVRTTIPKDKMTNRQKNFAYIEFECAASVEYAAVMNGSTFR 120
Query: 123 GRQLKVTVKRTNVP 136
GR + VT KRTN P
Sbjct: 121 GRPIVVTAKRTNKP 134
>gi|355710480|gb|EHH31944.1| hypothetical protein EGK_13114 [Macaca mulatta]
Length = 241
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 49/86 (56%), Gaps = 15/86 (17%)
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 111
E D RSV+VGN HF CG V+RVTI DKF G PKGYAY+EF +VQ
Sbjct: 156 EADHRSVYVGNVDYGGSAEELEAHFSGCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQ 215
Query: 112 EALHLNESELHGRQLKVTVKRTNVPG 137
A+ L++S GR +KV R PG
Sbjct: 216 AAVELDQSLFRGRVIKV---RQCSPG 238
>gi|359487356|ref|XP_003633575.1| PREDICTED: uncharacterized protein LOC100855398 [Vitis vinifera]
Length = 700
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 77/154 (50%), Gaps = 32/154 (20%)
Query: 49 KQDPAAGGSSLANR--EEVDSRSVFVGNQHFQSC-----------GTVNRVTIRTDK-FG 94
K P+A GS R E+ DSR++FV N HF + G V +V I TD G
Sbjct: 509 KMQPSAPGSYSTGRPLEDADSRTIFVNNVHFAATKDSLSRHFNKFGEVVKVIIVTDAATG 568
Query: 95 QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV-----PGMKQHRPRRPNPF 149
QPKG AYVEF++ EA + AL L+ + R LKV VKR++ PGM R R +PF
Sbjct: 569 QPKGSAYVEFMRKEAAEHALSLDGTSFMSRILKV-VKRSSTHQEAAPGMSWPRIARGSPF 627
Query: 150 MVYQSRGAIIPPFLYSPYGYGKIP---RFRMPMR 180
+ F P+ G IP R R+P++
Sbjct: 628 AAAR--------FARVPFQRG-IPGAFRARLPVK 652
>gi|297736228|emb|CBI24866.3| unnamed protein product [Vitis vinifera]
Length = 694
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 77/154 (50%), Gaps = 32/154 (20%)
Query: 49 KQDPAAGGSSLANR--EEVDSRSVFVGNQHFQSC-----------GTVNRVTIRTDK-FG 94
K P+A GS R E+ DSR++FV N HF + G V +V I TD G
Sbjct: 503 KMQPSAPGSYSTGRPLEDADSRTIFVNNVHFAATKDSLSRHFNKFGEVVKVIIVTDAATG 562
Query: 95 QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV-----PGMKQHRPRRPNPF 149
QPKG AYVEF++ EA + AL L+ + R LKV VKR++ PGM R R +PF
Sbjct: 563 QPKGSAYVEFMRKEAAEHALSLDGTSFMSRILKV-VKRSSTHQEAAPGMSWPRIARGSPF 621
Query: 150 MVYQSRGAIIPPFLYSPYGYGKIP---RFRMPMR 180
+ F P+ G IP R R+P++
Sbjct: 622 AAAR--------FARVPFQRG-IPGAFRARLPVK 646
>gi|342181601|emb|CCC91081.1| putative RNA-binding protein RBP14 [Trypanosoma congolense IL3000]
Length = 274
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 10 ETENKQVELDDMK--IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDS 67
E Q +++D++ +RLK ++E A GN + GG E D
Sbjct: 84 ELAEMQRQVNDLQEDLRLKALQETAAQDEGQRKSTGNTFSKNASVFVGGMD-PRTTESDL 142
Query: 68 RSVFVGNQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 126
R F G CGT+ R+T+ DKF GQ KG AY+EF E A+ N LHG+ L
Sbjct: 143 RVFFSG------CGTIKRLTMLRDKFTGQQKGTAYIEFDTVEQATSAIVKNGQSLHGKPL 196
Query: 127 KVTVKRTNVPGMKQHRPRRPN-PFMVYQSRGA 157
V VKR N+P ++ R P P Y+ GA
Sbjct: 197 TVAVKRDNIPAFQRGRGGAPGFPRGGYRGGGA 228
>gi|149234716|ref|XP_001523237.1| hypothetical protein LELG_05463 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146453026|gb|EDK47282.1| hypothetical protein LELG_05463 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 334
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 65/114 (57%), Gaps = 15/114 (13%)
Query: 40 AKVGNEMASKQDPAAGGSSLAN--REEVDSRSVFVGN-----------QHFQSCGTVNRV 86
A V + A PAA +++ + E D++S+++GN QHF CG + +V
Sbjct: 156 APVSSYSAGLAHPAASSHLISDEAKRESDAKSIYIGNVDYGSTPLELQQHFSLCGIIEKV 215
Query: 87 TIRTDKF-GQPKGYAYVEFLQSEAVQEALH-LNESELHGRQLKVTVKRTNVPGM 138
TI +KF G+PKG AY+ F E+V +A+ L+ S R+LKV KRTN+PG+
Sbjct: 216 TILNNKFTGRPKGVAYLAFQDQESVDKAIATLDGSIFRDRELKVMHKRTNIPGI 269
>gi|218194572|gb|EEC76999.1| hypothetical protein OsI_15321 [Oryza sativa Indica Group]
Length = 366
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 68/134 (50%), Gaps = 15/134 (11%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNQH 76
E+ D+K++LK++E + LR A++ N KQ + G E+ DSR+V V N H
Sbjct: 184 EMLDVKLKLKQVELDVLKLRSKQAQINN---VKQGFLSSGPHANLDEDADSRTVLVTNVH 240
Query: 77 FQS-----------CGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
F + CGTV ++ I TD G PKG A+V F E+V++A+ L+ S R
Sbjct: 241 FAATKEALSGHFMKCGTVLKINILTDAISGHPKGAAFVTFTDKESVEKAVSLSGSSFFSR 300
Query: 125 QLKVTVKRTNVPGM 138
L V K PG
Sbjct: 301 VLTVMRKAEAPPGF 314
>gi|215765000|dbj|BAG86697.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 68/134 (50%), Gaps = 15/134 (11%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNQH 76
E+ D+K++LK++E + LR A++ N KQ + G E+ DSR+V V N H
Sbjct: 184 EMLDVKLKLKQVELDVLKLRSKQAQINN---VKQGFLSSGPHANLDEDADSRTVLVTNVH 240
Query: 77 FQS-----------CGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
F + CGTV ++ I TD G PKG A+V F E+V++A+ L+ S R
Sbjct: 241 FAATKEALSGHFMKCGTVLKINILTDAISGHPKGAAFVTFTDKESVEKAVSLSGSSFFSR 300
Query: 125 QLKVTVKRTNVPGM 138
L V K PG
Sbjct: 301 VLTVMRKAEAPPGF 314
>gi|343471000|emb|CCD16472.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 212
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 70/147 (47%), Gaps = 11/147 (7%)
Query: 15 QVELDDMK--IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFV 72
Q +++D++ +RLK ++E A GN + GG E D R F
Sbjct: 27 QRQVNDLQEDLRLKALQETAAQDEGQRKSTGNTFSKNASVFVGGMD-PRTTESDLRVFFS 85
Query: 73 GNQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVK 131
G CGT+ R+T+ DKF GQ KG AY+EF E A+ N LHG+ L V VK
Sbjct: 86 G------CGTIKRLTMLRDKFTGQQKGTAYIEFDTVEQATSAIVKNGQSLHGKPLTVAVK 139
Query: 132 RTNVPGMKQHRPRRPN-PFMVYQSRGA 157
R NVP ++ R P P Y+ GA
Sbjct: 140 RDNVPAFQRGRGGAPGFPRGGYRGGGA 166
>gi|146421021|ref|XP_001486462.1| hypothetical protein PGUG_02133 [Meyerozyma guilliermondii ATCC
6260]
gi|146389877|gb|EDK38035.1| hypothetical protein PGUG_02133 [Meyerozyma guilliermondii ATCC
6260]
Length = 159
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 22/120 (18%)
Query: 39 HAKVGNEMASKQDPAAG-GSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRV 86
H +V + + + Q G G L +EE+D RS++VGN + F + GTV RV
Sbjct: 9 HQEVSHPIDNTQGTEQGRGEHLPKQEEIDQRSIYVGNVEYLSTPGQLEEFFSAVGTVERV 68
Query: 87 TIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHG-----RQLKVTVKRTNVPGMKQ 140
TI D++ G KG+AY+EF +EA + A+ ELHG R+L+++ KR N+PG ++
Sbjct: 69 TILFDRYSGLSKGFAYIEFDTTEAAERAIE----ELHGKKFNERELRISPKRINLPGFRK 124
>gi|443922030|gb|ELU41543.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 203
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 70/133 (52%), Gaps = 20/133 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKV-----GNEMASKQDPAAGGSSLANREEVDSRSVF 71
EL+ MK R++EME EA LR M A+ + S A+ + E VD+RSV+
Sbjct: 19 ELEQMKARVREMEAEAEKLRTMTAQAQPGSGPGSVGSGGGDASNEFGEESAEIVDARSVY 78
Query: 72 VGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQE---ALHL 116
VGN HFQ+ GT+NR+TI DKF G PKG+ ++ + S E A L
Sbjct: 79 VGNVDYGATPEELQAHFQAVGTINRITILCDKFTGHPKGFVWIFWFISGLDVETGTAEVL 138
Query: 117 NESELHGRQLKVT 129
N+S GR +KV+
Sbjct: 139 NDSLFRGRAIKVS 151
>gi|356528571|ref|XP_003532874.1| PREDICTED: uncharacterized protein LOC100817963 [Glycine max]
Length = 493
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 48 SKQDPAAGGSSLANR--EEVDSRSVFVGNQHFQSC-----------GTVNRVTIRTDK-F 93
SK A GS+ A R E+VDSR++FV N HF + G V +V I TD
Sbjct: 299 SKAHLTASGSNAAGRPSEDVDSRTIFVSNVHFAATKDGLSRHFNRFGEVLKVIIVTDAAT 358
Query: 94 GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRT----NVPGMKQHRPRRPNPF 149
GQPKG AYVEF++ EA AL L+ + R LKV K + P M R R +PF
Sbjct: 359 GQPKGAAYVEFMRKEAADNALSLDNTSFMSRILKVIKKSATTQESAPAMAWPRIVRGSPF 418
>gi|260951495|ref|XP_002620044.1| hypothetical protein CLUG_01203 [Clavispora lusitaniae ATCC 42720]
gi|238847616|gb|EEQ37080.1| hypothetical protein CLUG_01203 [Clavispora lusitaniae ATCC 42720]
Length = 219
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 68/127 (53%), Gaps = 20/127 (15%)
Query: 24 RLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNQH------- 76
+L E+E EA LR + +++ + S + + +VDSRSV++GN H
Sbjct: 62 QLTELEREAAMLRDISSQLDDISNSTMNKVS-------TSDVDSRSVYIGNLHRDVTALE 114
Query: 77 ----FQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL-HLNESELHGRQLKVTV 130
F S V RVTI +DK G P GYAY+EF E +A+ ++ + L GR+LKV
Sbjct: 115 LALRFSSNEDVVRVTILSDKTTGLPNGYAYLEFSSVEGASQAMARMDGTPLRGRKLKVRW 174
Query: 131 KRTNVPG 137
KRTN+ G
Sbjct: 175 KRTNIFG 181
>gi|308456423|ref|XP_003090653.1| hypothetical protein CRE_01432 [Caenorhabditis remanei]
gi|308261964|gb|EFP05917.1| hypothetical protein CRE_01432 [Caenorhabditis remanei]
Length = 183
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 66/128 (51%), Gaps = 21/128 (16%)
Query: 26 KEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE---VDSRSVFVGN-------- 74
+E++ EA L+Q+ K+ M + G +L EE +D++S+FVGN
Sbjct: 15 EELQAEARVLKQIQTKLSETMET------GKKTLPTEEEQKSIDAKSIFVGNVDFGATVA 68
Query: 75 ---QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
HF CG + R I +K + K +AY+EF ++ + A+ +N S GR + VT
Sbjct: 69 ELEAHFYGCGQIVRTRIPKNKMTNRQKNFAYIEFECADNAENAMVMNGSTFRGRPIVVTT 128
Query: 131 KRTNVPGM 138
KRTN PGM
Sbjct: 129 KRTNKPGM 136
>gi|115457640|ref|NP_001052420.1| Os04g0306800 [Oryza sativa Japonica Group]
gi|38347198|emb|CAD40523.2| OSJNBa0023J03.10 [Oryza sativa Japonica Group]
gi|113563991|dbj|BAF14334.1| Os04g0306800 [Oryza sativa Japonica Group]
gi|116308926|emb|CAH66055.1| OSIGBa0125J07.4 [Oryza sativa Indica Group]
gi|116309108|emb|CAH66214.1| OSIGBa0096F13.9 [Oryza sativa Indica Group]
gi|215695292|dbj|BAG90483.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222628583|gb|EEE60715.1| hypothetical protein OsJ_14219 [Oryza sativa Japonica Group]
Length = 649
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/133 (35%), Positives = 68/133 (51%), Gaps = 15/133 (11%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNQH 76
E+ D+K++LK++E + LR A++ N KQ + G E+ DSR+V V N H
Sbjct: 467 EMLDVKLKLKQVELDVLKLRSKQAQINN---VKQGFLSSGPHANLDEDADSRTVLVTNVH 523
Query: 77 FQS-----------CGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
F + CGTV ++ I TD G PKG A+V F E+V++A+ L+ S R
Sbjct: 524 FAATKEALSGHFMKCGTVLKINILTDAISGHPKGAAFVTFTDKESVEKAVSLSGSSFFSR 583
Query: 125 QLKVTVKRTNVPG 137
L V K PG
Sbjct: 584 VLTVMRKAEAPPG 596
>gi|297737390|emb|CBI26591.3| unnamed protein product [Vitis vinifera]
Length = 151
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 55/78 (70%), Gaps = 5/78 (6%)
Query: 2 EGDDMDMI-----ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGG 56
+ +D+DM+ +++ ++DM+ RLKE+EEEA ALR+M AKV EM + QD ++
Sbjct: 26 DAEDVDMVSRPEDDSDPNSKNIEDMRKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSAS 85
Query: 57 SSLANREEVDSRSVFVGN 74
++ A +EEVDSRS++VGN
Sbjct: 86 ATQAEKEEVDSRSIYVGN 103
>gi|302503907|ref|XP_003013913.1| small subunit of nuclear cap-binding protein complex [Arthroderma
benhamiae CBS 112371]
gi|291177479|gb|EFE33273.1| small subunit of nuclear cap-binding protein complex [Arthroderma
benhamiae CBS 112371]
Length = 303
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 21/94 (22%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-- 74
E+ M+ RL +ME EA L +M A + + + ++ ++E++D+RS+FVGN
Sbjct: 25 EIAAMRERLTKMESEAAKLHEMQASLDQQTENLRE---------DKEDIDARSIFVGNVD 75
Query: 75 ---------QHFQSCGTVNRVTIRTDKF-GQPKG 98
HFQSCG++NRVTI DKF G PKG
Sbjct: 76 YAASPEEIQAHFQSCGSINRVTILLDKFTGHPKG 109
>gi|326513590|dbj|BAJ87814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 644
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 7 DMIETENKQV--ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE 64
D + NK V E+ D+K++LK++E + LR A++ N KQ G E+
Sbjct: 451 DGVNYSNKPVKDEMLDVKLKLKQVELDMLKLRSKQAQINN---GKQGALPSGPHSNLEED 507
Query: 65 VDSRSVFVGNQHFQS-----------CGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQE 112
D+R+V V N HF + CGTV ++ + TD G PKG A+V F E++
Sbjct: 508 ADARTVLVTNVHFAATKEALSTHFMKCGTVLKLNMLTDAITGHPKGAAFVTFADKESIGR 567
Query: 113 ALHLNESELHGRQLKVTVKRTNVPGM 138
AL L+ + + R L V K PG
Sbjct: 568 ALSLSGTSFYSRVLTVMRKAEAPPGF 593
>gi|302659609|ref|XP_003021492.1| small subunit of nuclear cap-binding protein complex [Trichophyton
verrucosum HKI 0517]
gi|291185395|gb|EFE40874.1| small subunit of nuclear cap-binding protein complex [Trichophyton
verrucosum HKI 0517]
Length = 126
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 21/99 (21%)
Query: 13 NKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFV 72
+ + E+ M+ RL +ME EA L +M A + + + ++ ++E++D+RS+FV
Sbjct: 21 DDEEEIAAMRERLTKMESEAAKLHEMQASLDQQTENLRE---------DKEDIDARSIFV 71
Query: 73 GN-----------QHFQSCGTVNRVTIRTDKF-GQPKGY 99
GN HFQSCG++NRVTI DKF G PKG+
Sbjct: 72 GNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGF 110
>gi|357162450|ref|XP_003579415.1| PREDICTED: uncharacterized protein LOC100842396 [Brachypodium
distachyon]
Length = 641
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 31/181 (17%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNQH 76
E+ D+K++LK+ME + LR A++ N KQ G + ++ DSR+V V N H
Sbjct: 460 EMLDVKLKLKQMELDMLKLRSKQAQINN---GKQGAPPSGPNSNLEDDADSRTVLVTNVH 516
Query: 77 FQS-----------CGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGR 124
F + CG V + + TD G PKG A+V F E++ A+ L+ + + R
Sbjct: 517 FAATKEALSTHFMKCGRVLKNIVLTDANTGHPKGAAFVTFADKESIGRAISLSGTSFYSR 576
Query: 125 QLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 184
L V K PG F+V + + P+ P+ G P+ R S Y
Sbjct: 577 VLTVVRKAEAPPG-----------FLVSVQQTGMPQPWNSPPFQKGASPK-----RLSSY 620
Query: 185 Y 185
+
Sbjct: 621 H 621
>gi|326482748|gb|EGE06758.1| RNP domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 122
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 21/99 (21%)
Query: 13 NKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFV 72
+ + E+ M+ RL +ME EA L +M A + + + ++ ++E++D+RS+FV
Sbjct: 21 DDEEEIAAMRERLTKMESEAAKLHEMQASLDQQTENLRE---------DKEDIDARSIFV 71
Query: 73 GN-----------QHFQSCGTVNRVTIRTDKF-GQPKGY 99
GN HFQSCG++NRVTI DKF G PKG+
Sbjct: 72 GNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGF 110
>gi|355672297|gb|AER95015.1| BCL2-like 2 [Mustela putorius furo]
Length = 216
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 67/113 (59%), Gaps = 15/113 (13%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G S+ + E D+RS++VG
Sbjct: 103 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVG 162
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL 114
N HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L
Sbjct: 163 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL 215
>gi|345800807|ref|XP_851081.2| PREDICTED: LOW QUALITY PROTEIN: embryonic polyadenylate-binding
protein 2 [Canis lupus familiaris]
Length = 310
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 22/97 (22%)
Query: 64 EVDSRSVFVGNQ------------HFQSCGTVNRVTIRTDKF-GQPKG--------YAYV 102
E D RS++VGN +F CG V+RVTI DKF G P+G YAY+
Sbjct: 165 ESDHRSIYVGNXVDYGSTAEELEAYFNPCGEVHRVTILCDKFSGHPQGVSASQAAGYAYI 224
Query: 103 EFLQSEAVQEALHLNESELHGRQLKVT-VKRTNVPGM 138
EF + Q A+ L++S GR +KV +RTN+PG+
Sbjct: 225 EFAAKSSAQAAVELDQSIFRGRVIKVCAAQRTNLPGI 261
>gi|403363390|gb|EJY81440.1| RNA recognition motif protein [Oxytricha trifallax]
Length = 388
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 45/82 (54%), Gaps = 12/82 (14%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL 114
+RS+F+ N HF+ CG + R TI TDK GQP G+AY+EF E Q +
Sbjct: 224 ARSIFIKNVDYKTTKNDLEDHFKECGQITRCTIATDKHSGQPLGHAYIEFATLEGAQRSK 283
Query: 115 HLNESELHGRQLKVTVKRTNVP 136
LNES GRQ+ V KR N P
Sbjct: 284 LLNESLFKGRQITVQPKRKNKP 305
>gi|118371394|ref|XP_001018896.1| polyadenylate-binding protein 2 [Tetrahymena thermophila]
gi|89300663|gb|EAR98651.1| polyadenylate-binding protein 2 [Tetrahymena thermophila SB210]
Length = 180
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 22/138 (15%)
Query: 51 DPAAGGSSLANREEVDSRSVFVGNQH-----------FQSCGTVNRVTIRTDKFGQPKGY 99
D + ++E D RS+FV N F+ CG + ++TI + GQ KG+
Sbjct: 42 DSKEKNDEIIQQKEEDKRSIFVQNVEYNTTKEELMDIFKDCGEIEKITIPQTRQGQGKGF 101
Query: 100 AYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPN------PFMVYQ 153
AY++F+ +V+ A L++S GR +KV KRTN G K+ + +PN P+M
Sbjct: 102 AYIQFVDKSSVELAKALSDSIHRGRAIKVLPKRTNQHGFKK-KSFKPNGFSKSFPYM--- 157
Query: 154 SRGAIIPPFLYSPYGYGK 171
+ +I+ F++ GY K
Sbjct: 158 -KNSIMKGFMFGGAGYYK 174
>gi|72390421|ref|XP_845505.1| RNA-binding protein RBP14 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62360364|gb|AAX80780.1| RNA-binding protein RBP14, putative [Trypanosoma brucei]
gi|70802040|gb|AAZ11946.1| RNA-binding protein RBP14, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261328909|emb|CBH11887.1| RNA-binding protein RBP14, putative [Trypanosoma brucei gambiense
DAL972]
Length = 214
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 9 IETENKQVELDDMK--IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVD 66
+E + Q +++D++ +RLK ++E A A + K +ASK G E D
Sbjct: 21 LELQEMQRQVNDLQEDLRLKTLQETA-AQDEGQRKTTGVVASKNTSVFVGGMDPRTTESD 79
Query: 67 SRSVFVGNQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 125
R VF F +CGT+ R+T+ DKF GQ KG AY+EF E A+ N LHG+
Sbjct: 80 LR-VF-----FSACGTIKRLTMLRDKFTGQQKGTAYIEFETVEQAAAAIVKNGQSLHGKP 133
Query: 126 LKVTVKRTNVPGMK 139
L V +KR N+P +
Sbjct: 134 LTVAMKRDNIPAFQ 147
>gi|413938965|gb|AFW73516.1| hypothetical protein ZEAMMB73_612183 [Zea mays]
Length = 120
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 53/77 (68%), Gaps = 6/77 (7%)
Query: 1 MEGDDMDMIETEN---KQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS 57
M+G D+DM + + K ELD+MK RLKEMEEEA ALR M AKV EM DP+A S
Sbjct: 19 MDGADVDMAASGDDAAKLQELDEMKRRLKEMEEEAAALRDMQAKVAKEMQGG-DPSA--S 75
Query: 58 SLANREEVDSRSVFVGN 74
+ +E+VD+RSV+VGN
Sbjct: 76 TAEAKEQVDARSVYVGN 92
>gi|195612514|gb|ACG28087.1| hypothetical protein [Zea mays]
gi|413938967|gb|AFW73518.1| hypothetical protein ZEAMMB73_612183 [Zea mays]
Length = 93
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 53/77 (68%), Gaps = 6/77 (7%)
Query: 1 MEGDDMDMIETEN---KQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS 57
M+G D+DM + + K ELD+MK RLKEMEEEA ALR M AKV EM DP+A S
Sbjct: 19 MDGADVDMAASGDDAAKLQELDEMKRRLKEMEEEAAALRDMQAKVAKEMQGG-DPSA--S 75
Query: 58 SLANREEVDSRSVFVGN 74
+ +E+VD+RSV+VGN
Sbjct: 76 TAEAKEQVDARSVYVGN 92
>gi|157872658|ref|XP_001684864.1| putative RNA-binding protein [Leishmania major strain Friedlin]
gi|68127934|emb|CAJ06567.1| putative RNA-binding protein [Leishmania major strain Friedlin]
Length = 216
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 77/154 (50%), Gaps = 17/154 (11%)
Query: 7 DMIETENKQVELD-DMKIRLKEMEEEATALRQ-MHAKVGNEMASKQDPAAGGSSLANREE 64
+MI E+ Q +D D + L+EM+ + +L++ M K E A+K + ++ A
Sbjct: 11 EMISAED-QFSVDMDAEAELEEMKRQVDSLQEDMQLKALQESAAKDEGTRKTAAAAAATS 69
Query: 65 VDSR---SVFVGNQH-----------FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAV 110
S+ S+FVG+ F SCG + RVT+ D+ G PKG AYVEF
Sbjct: 70 GQSKTNTSIFVGDLDLRTTDADLRVFFASCGAITRVTVLKDRQGNPKGTAYVEFETEGQA 129
Query: 111 QEALHLNESELHGRQLKVTVKRTNVPGMKQHRPR 144
A+ + LHG+ LKV +KR N+P ++ R
Sbjct: 130 HAAILKDGQSLHGKPLKVAMKRDNIPAFQRGISR 163
>gi|401425835|ref|XP_003877402.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493647|emb|CBZ28937.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 216
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 17/154 (11%)
Query: 7 DMIETENKQVELD-DMKIRLKEMEEEATALRQ-MHAKVGNEMASKQD---PAAGGSSLAN 61
+MI E+ Q +D D + L+EM+ + +L++ M K E A+K + A ++ ++
Sbjct: 11 EMISAED-QFNVDMDAEAELEEMKRQVDSLQEDMQLKALQESAAKDEGTRKTAAAAAASS 69
Query: 62 REEVDSRSVFVGNQH-----------FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAV 110
+ + S+FVG+ F SCG + RVT+ D+ G PKG AYVEF
Sbjct: 70 GQTKTNTSIFVGDLDLRTTDADLRVFFASCGAITRVTVLKDRQGNPKGTAYVEFETEGQA 129
Query: 111 QEALHLNESELHGRQLKVTVKRTNVPGMKQHRPR 144
A+ + LHG+ LKV +KR N+P ++ R
Sbjct: 130 HAAILKDGQSLHGKPLKVAMKRDNIPAFQRGISR 163
>gi|52345686|ref|NP_001004890.1| RNA binding motif protein 34 [Xenopus (Silurana) tropicalis]
gi|49523226|gb|AAH75294.1| MGC88935 protein [Xenopus (Silurana) tropicalis]
Length = 412
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 74/156 (47%), Gaps = 33/156 (21%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-------- 74
I K+ + AL++ A+VG+ + D A+ SS N+ RS F+GN
Sbjct: 231 IVFKDESSASQALKRNGAEVGSGFHIRVDIASKRSSHDNK-----RSAFIGNLPYEIEEE 285
Query: 75 ---QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV-- 128
HF CG V V IR K G KG+ YV F ++AVQ AL LN SEL GR+++V
Sbjct: 286 AVRDHFSECGKVQGVRIIRDQKTGIGKGFGYVLFESADAVQLALKLNNSELSGRKIRVKR 345
Query: 129 ------TVKRTN--------VPGMKQHRPRRPNPFM 150
K TN + +KQ +P + N F+
Sbjct: 346 SLTAEAAQKSTNKSSDFKKKLDTLKQAKPLKGNSFV 381
>gi|89266850|emb|CAJ83915.1| novel protein containing RNA recognition motifs. (a.k.a. RRM, RBD,
or RNP domain) [Xenopus (Silurana) tropicalis]
Length = 406
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 74/156 (47%), Gaps = 33/156 (21%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-------- 74
I K+ + AL++ A+VG+ + D A+ SS N+ RS F+GN
Sbjct: 231 IVFKDESSASQALKRNGAEVGSGFHIRVDIASKRSSHDNK-----RSAFIGNLPYEIEEE 285
Query: 75 ---QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV-- 128
HF CG V V IR K G KG+ YV F ++AVQ AL LN SEL GR+++V
Sbjct: 286 AVRDHFSECGKVQGVRIIRDQKTGIGKGFGYVLFESADAVQLALKLNNSELSGRKIRVKR 345
Query: 129 ------TVKRTN--------VPGMKQHRPRRPNPFM 150
K TN + +KQ +P + N F+
Sbjct: 346 SLTAEAAQKSTNKSSDFKKKLDTLKQAKPLKGNSFV 381
>gi|398019614|ref|XP_003862971.1| RNA-binding protein, putative [Leishmania donovani]
gi|322501202|emb|CBZ36281.1| RNA-binding protein, putative [Leishmania donovani]
Length = 214
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 17/154 (11%)
Query: 7 DMIETENKQVELD-DMKIRLKEMEEEATALRQ-MHAKVGNEMASKQD---PAAGGSSLAN 61
+MI E+ Q +D D + L+EM+ + +L++ M K E A+K + A ++ ++
Sbjct: 11 EMISAED-QFNVDMDAEAELEEMKRQVESLQEDMQLKALQESAAKDEGTRKTAAAAAASS 69
Query: 62 REEVDSRSVFVGNQH-----------FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAV 110
+ + S+FVG+ F SCG + RVT+ D+ G PKG AYVEF
Sbjct: 70 GQTKTNTSIFVGDLDLRTTDADLRVFFASCGAITRVTVLKDRQGNPKGTAYVEFETEGQA 129
Query: 111 QEALHLNESELHGRQLKVTVKRTNVPGMKQHRPR 144
A+ + LHG+ LKV +KR N+P ++ R
Sbjct: 130 HAAILKDGQSLHGKPLKVAMKRDNIPAFQRGISR 163
>gi|146093988|ref|XP_001467105.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|134071469|emb|CAM70158.1| putative RNA-binding protein [Leishmania infantum JPCM5]
Length = 216
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 17/154 (11%)
Query: 7 DMIETENKQVELD-DMKIRLKEMEEEATALRQ-MHAKVGNEMASKQD---PAAGGSSLAN 61
+MI E+ Q +D D + L+EM+ + +L++ M K E A+K + A ++ ++
Sbjct: 11 EMISAED-QFNVDMDAEAELEEMKRQVESLQEDMQLKALQESAAKDEGTRKTAAAAAASS 69
Query: 62 REEVDSRSVFVGNQH-----------FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAV 110
+ + S+FVG+ F SCG + RVT+ D+ G PKG AYVEF
Sbjct: 70 GQTKTNTSIFVGDLDLRTTDADLRVFFASCGAITRVTVLKDRQGNPKGTAYVEFETEGQA 129
Query: 111 QEALHLNESELHGRQLKVTVKRTNVPGMKQHRPR 144
A+ + LHG+ LKV +KR N+P ++ R
Sbjct: 130 HAAILKDGQSLHGKPLKVAMKRDNIPAFQRGISR 163
>gi|356555297|ref|XP_003545970.1| PREDICTED: uncharacterized protein LOC100787464 [Glycine max]
Length = 481
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 88/182 (48%), Gaps = 29/182 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANR--EEVDSRSVFVGN 74
E D + + ++E A+ L KV N S Q S+ A R E+VDSR++FV N
Sbjct: 258 ERGDPRSSTRLVKENASTL-----KVSNGNVSFQYLLTFCSNAAGRPSEDVDSRTIFVSN 312
Query: 75 QHFQSC-----------GTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELH 122
HF + G V +V I TD GQPKG AYVEF++ EA AL L+ +
Sbjct: 313 VHFAATKDGLSRHFNRFGDVLKVIIVTDAATGQPKGAAYVEFMRKEAADNALSLDNTSFM 372
Query: 123 GRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYS----PYGYGKIPRFRMP 178
R LKV +K++ P ++ P P +V +G+ P +S P G + R R P
Sbjct: 373 SRILKV-IKKSATP--QESAPAMAWPRIV---KGSPFPSARFSRHPFPRGIPGVFRARPP 426
Query: 179 MR 180
++
Sbjct: 427 IK 428
>gi|323304471|gb|EGA58240.1| Sgn1p [Saccharomyces cerevisiae FostersB]
Length = 141
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 12/85 (14%)
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQS 107
A++ E DSRS+FVGN HF+ CG + R+T+ D+ G PKGY Y+EF
Sbjct: 56 AHQLEADSRSIFVGNITPDVTPEQIEDHFKBCGQIKRITLLYDRNTGTPKGYGYIEFESP 115
Query: 108 EAVQEALHLNESELHGRQLKVTVKR 132
++AL LN EL G+++ K+
Sbjct: 116 AYXEKALQLNGGELKGKKISCLQKK 140
>gi|410084060|ref|XP_003959607.1| hypothetical protein KAFR_0K01170 [Kazachstania africana CBS 2517]
gi|372466199|emb|CCF60472.1| hypothetical protein KAFR_0K01170 [Kazachstania africana CBS 2517]
Length = 141
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 18/95 (18%)
Query: 57 SSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTI----RTDKFGQPKGYAY 101
+ +A + + DS+S+FV N +HF+ CG++ R+TI T+KF GYAY
Sbjct: 36 TKMAVQRDADSKSIFVRNIHSDTTPEIIEEHFKECGSIKRITILCNKSTNKFN---GYAY 92
Query: 102 VEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVP 136
+EF E ++AL L+ +EL+G ++ V KRTN P
Sbjct: 93 IEFDSREKREQALLLDNTELNGCKISVLRKRTNRP 127
>gi|198426504|ref|XP_002123932.1| PREDICTED: similar to zinc finger CCCH-type containing 14 [Ciona
intestinalis]
Length = 842
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 28/178 (15%)
Query: 7 DMIETENKQVELDDMKIRLKEMEEEATALRQMHA-------KVGNEMASKQDPAAGGSSL 59
D +E+ ++ EL +M+ +L +M+EEA L+ + + + ++ P+A
Sbjct: 644 DNVESSDQ--ELMNMREKLLKMQEEAKKLKILQTEQLALLERTVSLKTAENKPSATA--- 698
Query: 60 ANREEVDSRSVFVGNQHFQS-----------CGTVNRVTIRTDKF-GQPKGYAYVEFLQS 107
E D +S+ + N HF S CG V R TI D F G PKG+AY++F ++
Sbjct: 699 ---ENSDEKSIHIANVHFSSTEKQLSEHFSICGKVVRATILKDAFTGHPKGFAYLQFEEA 755
Query: 108 EAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYS 165
+V AL + + R +KVT K++N K RP + YQ P LY+
Sbjct: 756 SSVDMALAFDGTTFCSRAIKVT-KKSNEAIAKTAPAARPRYRVSYQYSAPRFPSRLYT 812
>gi|50290735|ref|XP_447800.1| hypothetical protein [Candida glabrata CBS 138]
gi|38603385|dbj|BAD02472.1| hypothetical protein [Candida glabrata]
gi|49527111|emb|CAG60749.1| unnamed protein product [Candida glabrata]
Length = 144
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 12/90 (13%)
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPK-GYAYVEFLQSEAVQ 111
E D+ S+++GN +HF+SCG + R+T+ DK P GYAYVEF ++
Sbjct: 41 EADACSIYIGNISLDTTPEEIDEHFKSCGVIKRITMLYDKNTGPSIGYAYVEFDSIDSRD 100
Query: 112 EALHLNESELHGRQLKVTVKRTNVPGMKQH 141
+AL N + L + V KRTN+P KQ+
Sbjct: 101 KALDFNGTNLRQHVISVERKRTNIPNYKQN 130
>gi|147898640|ref|NP_001085272.1| RNA binding motif protein 34 [Xenopus laevis]
gi|62185676|gb|AAH92323.1| LOC443584 protein [Xenopus laevis]
Length = 414
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 72/155 (46%), Gaps = 32/155 (20%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-------- 74
+ K+ + AL + A+VG+ + D A+ SS N+ RS FVGN
Sbjct: 233 VVFKDESSASKALMRNGAEVGSGFHIRVDMASKSSSHDNK-----RSAFVGNLPYDIEEE 287
Query: 75 ---QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV-- 128
+HF CG V V IR K G KG+ YV F ++AVQ AL LN S+L GR+++V
Sbjct: 288 SIRKHFSQCGDVQGVRIIRDQKTGIGKGFGYVLFESADAVQLALKLNNSQLSGRRIRVKR 347
Query: 129 ------TVKRTNVPGMKQH-------RPRRPNPFM 150
K TN KQ +P + N F+
Sbjct: 348 SVTAEAAQKSTNKTSFKQKLDTLNQTKPIKANSFV 382
>gi|340054247|emb|CCC48543.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 213
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 21/147 (14%)
Query: 2 EGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLAN 61
EGD + + + EL +M+ ++ +++E+ L+ + ++ ++ G S++ N
Sbjct: 7 EGDGVFFNTEIDPEAELQEMQRQVNDLQEDL-RLKTLQETAAHDEGQRK--GTGSSTIKN 63
Query: 62 REEVDSRSVFVGNQH-----------FQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 109
S+FVG F CG + R+T+ DKF GQ KG +Y+EF E
Sbjct: 64 T------SIFVGGLDPRTTESDLRVFFSGCGAIKRLTMLRDKFTGQLKGTSYIEFETVEQ 117
Query: 110 VQEALHLNESELHGRQLKVTVKRTNVP 136
AL N LHGR L V VKR NVP
Sbjct: 118 ANIALVKNGQSLHGRPLVVAVKRDNVP 144
>gi|432843238|ref|XP_004065582.1| PREDICTED: RNA-binding protein 34-like [Oryzias latipes]
Length = 421
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 22/117 (18%)
Query: 28 MEEEATALRQMHAKVGNEMAS----KQDPAAGGSSLANREEVDSRSVFVGN--------- 74
+EEA A+R + + G E+ + + D A GSS ++ RSVFVGN
Sbjct: 226 FKEEAGAIRALESN-GMEVETNYNIRVDRATDGSSHDHK-----RSVFVGNLPFDIHEQA 279
Query: 75 --QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HF++CGTV V + DK G KG+ YV F +++VQ AL LN S+L GR ++V
Sbjct: 280 FRKHFETCGTVEAVRLVRDKDSGLGKGFGYVLFESADSVQLALELNASKLEGRSIRV 336
>gi|357164112|ref|XP_003579952.1| PREDICTED: uncharacterized protein LOC100837530 [Brachypodium
distachyon]
Length = 689
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 61/120 (50%), Gaps = 22/120 (18%)
Query: 49 KQDPAAGGSSLANREE--VDSRSVFVGNQHFQSC-----------GTVNRVTIRTDKF-G 94
K AGGS + E DSR+VFV N HF + G V + I TD G
Sbjct: 491 KASSVAGGSHSTGQPEGGPDSRTVFVNNVHFAATKDALSRHFNKFGAVLKTLIVTDGVTG 550
Query: 95 QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV-----PGMKQHRPRRPNPF 149
QP G AY+EFLQ E+ ++AL LN + R LKV V+R++V PG R R +PF
Sbjct: 551 QPTGSAYIEFLQKESAEQALTLNGTSFMSRILKV-VRRSSVEVPQLPGWS--RASRGSPF 607
>gi|397508184|ref|XP_003824546.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 34 [Pan
paniscus]
Length = 459
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 75/154 (48%), Gaps = 26/154 (16%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-------- 74
+ KE AL++ A++ + + D A+ SS D RSVFVGN
Sbjct: 277 VVFKEESAATQALKRNGAQIADGFRIRVDLASETSSR------DKRSVFVGNLPYKVEES 330
Query: 75 ---QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
+HF CG++ V I DK G KG+ YV F +++V AL LN SEL GR+L+V +
Sbjct: 331 AVEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV-M 389
Query: 131 KRTNVPGMKQH--RPR-----RPNPFMVYQSRGA 157
+ N +KQ PR +P + + SR A
Sbjct: 390 RSVNKEKLKQQNSNPRLKNVSKPKQGLNFTSRTA 423
>gi|49114983|gb|AAH72838.1| LOC443584 protein, partial [Xenopus laevis]
Length = 403
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 72/155 (46%), Gaps = 32/155 (20%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-------- 74
+ K+ + AL + A+VG+ + D A+ SS N+ RS FVGN
Sbjct: 233 VVFKDESSASKALMRNGAEVGSGFHIRVDMASKSSSHDNK-----RSAFVGNLPYDIEEE 287
Query: 75 ---QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV-- 128
+HF CG V V IR K G KG+ YV F ++AVQ AL LN S+L GR+++V
Sbjct: 288 SIRKHFSQCGDVQGVRIIRDQKTGIGKGFGYVLFESADAVQLALKLNNSQLSGRRIRVKR 347
Query: 129 ------TVKRTNVPGMKQH-------RPRRPNPFM 150
K TN KQ +P + N F+
Sbjct: 348 SVTAEAVQKSTNKTSFKQKLDTLNQTKPIKGNSFV 382
>gi|407416749|gb|EKF37788.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 212
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 10/136 (7%)
Query: 10 ETENKQVELDDMK--IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDS 67
E + Q ++ D++ +RLK ++E A A + H K +A+K G E +
Sbjct: 23 ELQEMQRQVSDLQEDLRLKTLQETA-AQDEGHRKSTGSVATKNTSIFVGGMDPRTTEGEL 81
Query: 68 RSVFVGNQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 126
R VF F SCGT+ R+T+ DKF GQ KG AY+EF E + + LHG+ L
Sbjct: 82 R-VF-----FSSCGTIKRLTMLRDKFTGQLKGNAYIEFEAPEQAAAGILKDGQSLHGKPL 135
Query: 127 KVTVKRTNVPGMKQHR 142
V +KR N+P ++ R
Sbjct: 136 NVAMKRDNIPAFQRGR 151
>gi|332812270|ref|XP_514284.3| PREDICTED: RNA-binding protein 34 isoform 2 [Pan troglodytes]
gi|410225796|gb|JAA10117.1| RNA binding motif protein 34 [Pan troglodytes]
gi|410267564|gb|JAA21748.1| RNA binding motif protein 34 [Pan troglodytes]
gi|410289770|gb|JAA23485.1| RNA binding motif protein 34 [Pan troglodytes]
Length = 430
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 74/152 (48%), Gaps = 26/152 (17%)
Query: 25 LKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN---------- 74
KE AL++ A++ + + D A+ SS D RSVFVGN
Sbjct: 250 FKEESAATQALKRNGAQIADGFRIRVDLASETSSR------DKRSVFVGNLPYKVEESAV 303
Query: 75 -QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKR 132
+HF CG++ V I DK G KG+ YV F +++V AL LN SEL GR+L+V ++
Sbjct: 304 EKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV-MRS 362
Query: 133 TNVPGMKQH--RPR-----RPNPFMVYQSRGA 157
N +KQ PR +P + + SR A
Sbjct: 363 VNKEKLKQQNSNPRLKNVSKPKQGLNFTSRTA 394
>gi|308456413|ref|XP_003090648.1| hypothetical protein CRE_01435 [Caenorhabditis remanei]
gi|308261959|gb|EFP05912.1| hypothetical protein CRE_01435 [Caenorhabditis remanei]
Length = 197
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 34/140 (24%)
Query: 27 EMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE---VDSRSVFVGN--------- 74
E+E EA L+++ K+ M G S EE +D++S+FVGN
Sbjct: 17 EIEAEARVLKEIQMKLSETMD------VGKVSSPTEEEQKAIDAKSIFVGNVDFGATVAE 70
Query: 75 --QHFQSCGTVNRVTI--------------RTDKFGQPKGYAYVEFLQSEAVQEALHLNE 118
HF+ CG + R+TI + + YA++EF + +V A+ +N
Sbjct: 71 LEAHFKGCGEIVRITIPKDKITKKQKKYVKEVKEILLSEYYAFIEFESAGSVANAIVMNG 130
Query: 119 SELHGRQLKVTVKRTNVPGM 138
S RQ+ VT+KRTN PGM
Sbjct: 131 STFRERQIVVTLKRTNKPGM 150
>gi|345326998|ref|XP_001512144.2| PREDICTED: RNA-binding protein 34-like [Ornithorhynchus anatinus]
Length = 416
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 42/75 (56%), Gaps = 12/75 (16%)
Query: 66 DSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEA 113
D RSVFVGN +HF CG V V I D G KG+ YV F ++AVQ A
Sbjct: 273 DKRSVFVGNLAYKIEEASVQEHFSDCGQVVAVRIVRDGVTGAGKGFGYVLFANTDAVQLA 332
Query: 114 LHLNESELHGRQLKV 128
L LN SEL GR+L+V
Sbjct: 333 LKLNNSELMGRKLRV 347
>gi|395728858|ref|XP_003775451.1| PREDICTED: AT-rich interactive domain-containing protein 4B [Pongo
abelii]
Length = 1815
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 69/139 (49%), Gaps = 21/139 (15%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-------- 74
+ KE AL++ A++ + + D A+ SS D RSVFVGN
Sbjct: 1633 VVFKEESAATQALKRNGAQIADGFRIRVDLASETSSR------DKRSVFVGNLPYKVEES 1686
Query: 75 ---QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
+HF CG++ V I DK G KG+ YV F +++V AL LN SEL GR+L+V +
Sbjct: 1687 AVEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV-M 1745
Query: 131 KRTNVPGMKQH--RPRRPN 147
+ N +KQ PR N
Sbjct: 1746 RSVNKEKLKQQNSNPRLKN 1764
>gi|71408239|ref|XP_806536.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70870310|gb|EAN84685.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 231
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 10/136 (7%)
Query: 10 ETENKQVELDDMK--IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDS 67
E + Q ++ D++ +RLK ++E A A + H K +A+K G E +
Sbjct: 42 ELQEMQRQVSDLQEDLRLKTLQETA-AQDEGHRKSTGFVATKNTSIFVGGLDPRTTEGEL 100
Query: 68 RSVFVGNQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 126
R VF F SCGT+ R+T+ DKF GQ KG AY+EF E + + LHG+ L
Sbjct: 101 R-VF-----FSSCGTIKRLTMLRDKFTGQLKGNAYIEFEAPEQAAAGILKDGQSLHGKPL 154
Query: 127 KVTVKRTNVPGMKQHR 142
V +KR N+P ++ R
Sbjct: 155 NVAMKRDNIPAFQRGR 170
>gi|119590411|gb|EAW70005.1| RNA binding motif protein 34, isoform CRA_a [Homo sapiens]
Length = 459
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 60/118 (50%), Gaps = 18/118 (15%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-------- 74
+ KE AL++ A++ + + D A+ SS D RSVFVGN
Sbjct: 277 VVFKEESAATQALKRNGAQIADGFRIRVDLASETSSR------DKRSVFVGNLPYKVEES 330
Query: 75 ---QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HF CG++ V I DK G KG+ YV F +++V AL LN SEL GR+L+V
Sbjct: 331 AIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV 388
>gi|332236264|ref|XP_003267324.1| PREDICTED: RNA-binding protein 34 [Nomascus leucogenys]
Length = 430
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 68/139 (48%), Gaps = 21/139 (15%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-------- 74
+ KE AL++ A++ + + D A SS D RSVFVGN
Sbjct: 248 VVFKEESAATQALKRNGAQIADGFRIRVDLACETSSR------DKRSVFVGNLPYKVEES 301
Query: 75 ---QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
+HF CG++ V I DK G KG+ YV F +++V AL LN SEL GR+L+V +
Sbjct: 302 AVEKHFLDCGSILAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV-M 360
Query: 131 KRTNVPGMKQH--RPRRPN 147
+ N +KQ PR N
Sbjct: 361 RSVNKEKLKQQNSNPRLKN 379
>gi|323354513|gb|EGA86350.1| Sgn1p [Saccharomyces cerevisiae VL3]
gi|365765027|gb|EHN06542.1| Sgn1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 141
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 12/78 (15%)
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQS 107
A++ E DSRS+FVGN HF+ CG + R+T+ D+ G PKGY Y+EF
Sbjct: 56 AHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESP 115
Query: 108 EAVQEALHLNESELHGRQ 125
++AL LN EL G++
Sbjct: 116 AYREKALQLNGGELKGKK 133
>gi|71654126|ref|XP_815688.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70880762|gb|EAN93837.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 231
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 10/136 (7%)
Query: 10 ETENKQVELDDMK--IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDS 67
E + Q ++ D++ +RLK ++E A A + H K +A+K G E +
Sbjct: 42 ELQEMQRQVSDLQEDLRLKTLQETA-AQDEGHRKSTGFVATKNTSIFVGGLDPRTTEGEL 100
Query: 68 RSVFVGNQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 126
R VF F SCGT+ R+T+ DKF GQ KG AY+EF E + + LHG+ L
Sbjct: 101 R-VF-----FSSCGTIKRLTMLRDKFTGQLKGNAYIEFEAPEQAAAGILKDGQSLHGKPL 154
Query: 127 KVTVKRTNVPGMKQHR 142
V +KR N+P ++ R
Sbjct: 155 NVAMKRDNIPAFQRGR 170
>gi|407851931|gb|EKG05622.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 231
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 10/136 (7%)
Query: 10 ETENKQVELDDMK--IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDS 67
E + Q ++ D++ +RLK ++E A A + H K +A+K G E +
Sbjct: 42 ELQEMQRQVSDLQEDLRLKTLQETA-AQDEGHRKSTGFVATKNASIFVGGLDPRTTEGEL 100
Query: 68 RSVFVGNQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 126
R VF F SCGT+ R+T+ DKF GQ KG AY+EF E + + LHG+ L
Sbjct: 101 R-VF-----FSSCGTIKRLTMLRDKFTGQLKGNAYIEFEAPEQAAAGILKDGQSLHGKPL 154
Query: 127 KVTVKRTNVPGMKQHR 142
V +KR N+P ++ R
Sbjct: 155 NVAMKRDNIPAFQRGR 170
>gi|146331996|gb|ABQ22504.1| RNA-binding protein 34-like protein [Callithrix jacchus]
Length = 220
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-------- 74
+ K+ AL++ A++ + + D A+ SS D RSVFVGN
Sbjct: 39 VVFKDGSAATQALKRNGAQIADGFRIRVDLASATSSR------DKRSVFVGNLPYKVEES 92
Query: 75 ---QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
+HF CG++ V I D+ G KG+ YV F +++V AL LN SEL GR+L+V +
Sbjct: 93 AVEKHFLDCGSIMAVRIVRDQVTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV-M 151
Query: 131 KRTNVPGMKQH 141
+ N +KQ+
Sbjct: 152 RSVNKEKLKQN 162
>gi|323337227|gb|EGA78481.1| Sgn1p [Saccharomyces cerevisiae Vin13]
Length = 166
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 12/78 (15%)
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQS 107
A++ E DSRS+FVGN HF+ CG + R+T+ D+ G PKGY Y+EF
Sbjct: 56 AHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESP 115
Query: 108 EAVQEALHLNESELHGRQ 125
++AL LN EL G++
Sbjct: 116 AYREKALQLNGGELKGKK 133
>gi|38344812|emb|CAE02868.2| OSJNBb0022F23.5 [Oryza sativa Japonica Group]
Length = 690
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 65 VDSRSVFVGNQHFQSC-----------GTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEA 113
DSR+VF+ N HF + G V + I TD GQP G AY+EFL E+ ++A
Sbjct: 512 TDSRTVFLSNVHFAATKDALSRHFNKFGAVLKTLIVTDIAGQPTGSAYIEFLHKESAEQA 571
Query: 114 LHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLY-SPYGYGKI 172
L L+ + R LKV K + + PR SRG+ P L + Y
Sbjct: 572 LTLDNTSFMSRMLKVVRKNSLEVSQQSGWPR--------GSRGSTFPSRLTRTAYPRPAF 623
Query: 173 P---RFRMPMR 180
P R R+P+R
Sbjct: 624 PGAMRGRLPLR 634
>gi|116310267|emb|CAH67273.1| B0806H07.2 [Oryza sativa Indica Group]
gi|116310423|emb|CAH67430.1| H0305E08.1 [Oryza sativa Indica Group]
Length = 690
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 65 VDSRSVFVGNQHFQSC-----------GTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEA 113
DSR+VF+ N HF + G V + I TD GQP G AY+EFL E+ ++A
Sbjct: 512 TDSRTVFLSNVHFAATKDALSRHFNKFGAVLKTLIVTDIAGQPTGSAYIEFLHKESAEQA 571
Query: 114 LHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLY-SPYGYGKI 172
L L+ + R LKV K + + PR SRG+ P L + Y
Sbjct: 572 LTLDNTSFMSRMLKVVRKNSLEVSQQSGWPR--------GSRGSTFPSRLTRTAYPRPAF 623
Query: 173 P---RFRMPMR 180
P R R+P+R
Sbjct: 624 PGAMRGRLPLR 634
>gi|20809545|gb|AAH29451.1| RNA binding motif protein 34 [Homo sapiens]
gi|312151154|gb|ADQ32089.1| RNA binding motif protein 34 [synthetic construct]
Length = 425
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 59/116 (50%), Gaps = 18/116 (15%)
Query: 25 LKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN---------- 74
KE AL++ A++ + + D A+ SS D RSVFVGN
Sbjct: 245 FKEESAATQALKRNGAQIADGFRIRVDLASETSSR------DKRSVFVGNLPYKVEESAI 298
Query: 75 -QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HF CG++ V I DK G KG+ YV F +++V AL LN SEL GR+L+V
Sbjct: 299 EKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV 354
>gi|158258156|dbj|BAF85051.1| unnamed protein product [Homo sapiens]
Length = 425
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 60/118 (50%), Gaps = 18/118 (15%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-------- 74
+ KE AL++ A++ + + D A+ SS D RSVFVGN
Sbjct: 243 VVFKEESAATQALKRNGAQIADGFRIRVDLASETSSR------DKRSVFVGNLPYKVEES 296
Query: 75 ---QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HF CG++ V I DK G KG+ YV F +++V AL LN SEL GR+L+V
Sbjct: 297 AIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV 354
>gi|238859597|ref|NP_055829.2| RNA-binding protein 34 isoform 1 [Homo sapiens]
gi|57013870|sp|P42696.2|RBM34_HUMAN RecName: Full=RNA-binding protein 34; AltName: Full=RNA-binding
motif protein 34
gi|119590412|gb|EAW70006.1| RNA binding motif protein 34, isoform CRA_b [Homo sapiens]
gi|306921633|dbj|BAJ17896.1| RNA binding motif protein 34 [synthetic construct]
Length = 430
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 60/118 (50%), Gaps = 18/118 (15%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-------- 74
+ KE AL++ A++ + + D A+ SS D RSVFVGN
Sbjct: 248 VVFKEESAATQALKRNGAQIADGFRIRVDLASETSSR------DKRSVFVGNLPYKVEES 301
Query: 75 ---QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HF CG++ V I DK G KG+ YV F +++V AL LN SEL GR+L+V
Sbjct: 302 AIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV 359
>gi|125548679|gb|EAY94501.1| hypothetical protein OsI_16274 [Oryza sativa Indica Group]
Length = 429
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 65 VDSRSVFVGNQHFQSC-----------GTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEA 113
DSR+VF+ N HF + G V + I TD GQP G AY+EFL E+ ++A
Sbjct: 251 TDSRTVFLSNVHFAATKDALSRHFNKFGAVLKTLIVTDIAGQPTGSAYIEFLHKESAEQA 310
Query: 114 LHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLY-SPYGYGKI 172
L L+ + R LKV K + + PR SRG+ P L + Y
Sbjct: 311 LTLDNTSFMSRMLKVVRKNSLEVSQQSGWPR--------GSRGSTFPSRLTRTAYPRPAF 362
Query: 173 P---RFRMPMR 180
P R R+P+R
Sbjct: 363 PGAMRGRLPLR 373
>gi|395849832|ref|XP_003797517.1| PREDICTED: RNA-binding protein 34, partial [Otolemur garnettii]
Length = 406
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 59/115 (51%), Gaps = 22/115 (19%)
Query: 66 DSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEA 113
D RSVFVGN +HF CG + V I D+ G KG+ YV F ++AV A
Sbjct: 265 DKRSVFVGNLPYKVEESVVEKHFLDCGNIVAVRIVRDQATGLGKGFGYVLFENTDAVHLA 324
Query: 114 LHLNESELHGRQLKV--------TVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIP 160
L LN SEL GR+L+V ++T+ PG+K R+P + + S+ A P
Sbjct: 325 LKLNNSELMGRKLRVMRCVNKEKLKQQTSNPGLKN--VRKPKQGLNFASKNAEGP 377
>gi|125590709|gb|EAZ31059.1| hypothetical protein OsJ_15147 [Oryza sativa Japonica Group]
Length = 494
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 65 VDSRSVFVGNQHFQSC-----------GTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEA 113
DSR+VF+ N HF + G V + I TD GQP G AY+EFL E+ ++A
Sbjct: 316 TDSRTVFLSNVHFAATKDALSRHFNKFGAVLKTLIVTDIAGQPTGSAYIEFLHKESAEQA 375
Query: 114 LHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLY-SPYGYGKI 172
L L+ + R LKV K + + PR SRG+ P L + Y
Sbjct: 376 LTLDNTSFMSRMLKVVRKNSLEVSQQSGWPR--------GSRGSTFPSRLTRTAYPRPAF 427
Query: 173 P---RFRMPMR 180
P R R+P+R
Sbjct: 428 PGAMRGRLPLR 438
>gi|383872573|ref|NP_001244577.1| RNA-binding protein 34 [Macaca mulatta]
gi|380810788|gb|AFE77269.1| RNA-binding protein 34 isoform 1 [Macaca mulatta]
gi|383416755|gb|AFH31591.1| RNA-binding protein 34 isoform 1 [Macaca mulatta]
Length = 427
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 69/139 (49%), Gaps = 21/139 (15%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-------- 74
+ KE AL++ A++ + + D A+ SS D RSVFVGN
Sbjct: 248 VVFKEESAATQALKRNGAQIADGFRIRVDLASETSSR------DKRSVFVGNLPYKVAES 301
Query: 75 ---QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
+HF CG+V V I D+ G KG+ YV F +++V AL LN SEL GR+L+V +
Sbjct: 302 AVEKHFLDCGSVMAVRIVRDQVTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV-M 360
Query: 131 KRTNVPGMKQH--RPRRPN 147
+ N +KQ PR N
Sbjct: 361 RSVNKEKLKQQNSNPRLKN 379
>gi|402858632|ref|XP_003893797.1| PREDICTED: LOW QUALITY PROTEIN: AT-rich interactive domain-containing
protein 4B, partial [Papio anubis]
Length = 1816
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 69/139 (49%), Gaps = 21/139 (15%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-------- 74
+ KE AL++ A++ + + D A+ SS D RSVFVGN
Sbjct: 1635 VVFKEESAATQALKRNGAQIADGFRIRVDLASETSSR------DKRSVFVGNLPYKVAES 1688
Query: 75 ---QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
+HF CG+V V I D+ G KG+ YV F +++V AL LN SEL GR+L+V +
Sbjct: 1689 AVEKHFLDCGSVMAVRIVRDQVTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV-M 1747
Query: 131 KRTNVPGMKQH--RPRRPN 147
+ N +KQ PR N
Sbjct: 1748 RSVNKEKLKQQNSNPRLKN 1766
>gi|301782455|ref|XP_002926642.1| PREDICTED: RNA-binding protein 34-like [Ailuropoda melanoleuca]
Length = 430
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 19/113 (16%)
Query: 29 EEEAT-ALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-----------QH 76
E AT AL++ A++ + + D A+ SS D RSVFVGN +H
Sbjct: 255 ESAATKALKRNGAQIADGFRIRVDLASDTSSR------DKRSVFVGNLPYKVEESAVEEH 308
Query: 77 FQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
F CG++ V I D+ G +G+ YV F ++AV AL LN SEL GR+L+V
Sbjct: 309 FLDCGSIVAVRIVRDRVTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRV 361
>gi|357514871|ref|XP_003627724.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
gi|355521746|gb|AET02200.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
Length = 815
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 65/137 (47%), Gaps = 21/137 (15%)
Query: 56 GSSLAN--REEVDSRSVFVGNQHFQS-----C------GTVNRVTIRTDKF-GQPKGYAY 101
GSS A+ ++ DSR++F N HF + C G V + I TD G+PKG AY
Sbjct: 624 GSSAASCPLDDADSRTIFASNVHFAATKDAICRHFNKFGEVLKAVIVTDSITGKPKGAAY 683
Query: 102 VEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPP 161
VEF+ EA AL L+ + R LKV K T + + P P P V RG+ P
Sbjct: 684 VEFMYKEAADNALSLDGTSFMSRILKVVRKST--AQQEDYAPAVPWPSGV---RGSPYPS 738
Query: 162 --FLYSPYGYGKIPRFR 176
FL +P G FR
Sbjct: 739 ARFLKAPIPAGTAGAFR 755
>gi|281341646|gb|EFB17230.1| hypothetical protein PANDA_016323 [Ailuropoda melanoleuca]
Length = 428
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 19/113 (16%)
Query: 29 EEEAT-ALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-----------QH 76
E AT AL++ A++ + + D A+ SS D RSVFVGN +H
Sbjct: 253 ESAATKALKRNGAQIADGFRIRVDLASDTSSR------DKRSVFVGNLPYKVEESAVEEH 306
Query: 77 FQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
F CG++ V I D+ G +G+ YV F ++AV AL LN SEL GR+L+V
Sbjct: 307 FLDCGSIVAVRIVRDRVTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRV 359
>gi|194042563|ref|XP_001925470.1| PREDICTED: RNA-binding protein 34 [Sus scrofa]
Length = 424
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 67/136 (49%), Gaps = 25/136 (18%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-------- 74
+ K+ A AL + A++ + + D A+ SS D RSVFVGN
Sbjct: 244 VVFKDESAAAKALERNGAQIADGFRIRVDLASETSSR------DKRSVFVGNLPYKVEES 297
Query: 75 ---QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV-- 128
+HF CG+V V I D G +G+ YV F ++AV AL LN SEL GR+L+V
Sbjct: 298 AVEKHFLDCGSVVAVRIVRDPVTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRVMR 357
Query: 129 -----TVKRTNVPGMK 139
+K+ + PG+K
Sbjct: 358 SIHKEKLKQNSNPGLK 373
>gi|326520627|dbj|BAK07572.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 502
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 62/118 (52%), Gaps = 16/118 (13%)
Query: 47 ASKQDPAAGGSSLANREEVDSRSVFVGNQHFQ------SC-----GTVNRVTIRTD-KFG 94
A+K GGS+ DSR+VFV N HF SC G V + I +D G
Sbjct: 303 ATKASSVVGGSTGQPESAPDSRTVFVSNVHFGATKDGLSCHFNKFGAVLKTLIVSDGATG 362
Query: 95 QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQ---HRPRRPNPF 149
QP G AY+EFL+ E+ ++AL LN + R LKV V++++V +Q R R +PF
Sbjct: 363 QPTGSAYIEFLEKESAEKALTLNGTSFMSRILKV-VRKSSVEVPQQPAWSRGVRASPF 419
>gi|296081813|emb|CBI20818.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 15/122 (12%)
Query: 20 DMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE-VDSRSVFVGN---- 74
D+K+R ++E E LR H + + K D ++ +L + EE ++ R+V+V N
Sbjct: 409 DLKVRFHQLEREMCKLRSKHTDL--KRGGKPDLSSSSGTLRHPEEDIEPRTVYVTNVHFA 466
Query: 75 -------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 126
HF CG V V I TD+ QPK A++ F E+V +AL L+ + R +
Sbjct: 467 ATKEALSNHFAKCGLVVNVVILTDETIAQPKRSAFITFASVESVNKALALSGTSFFSRTV 526
Query: 127 KV 128
KV
Sbjct: 527 KV 528
>gi|308448720|ref|XP_003087733.1| hypothetical protein CRE_13229 [Caenorhabditis remanei]
gi|308253205|gb|EFO97157.1| hypothetical protein CRE_13229 [Caenorhabditis remanei]
Length = 194
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 31/137 (22%)
Query: 27 EMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE---VDSRSVFVGN--------- 74
E+E EA L+++ K+ M G S EE +D++S+FVGN
Sbjct: 17 EIEAEARVLKEIQMKLSETMD------VGKVSSPTEEEQKAIDAKSIFVGNVDFGATVAE 70
Query: 75 --QHFQSCGTVNRVTI-----------RTDKFGQPKGYAYVEFLQSEAVQEALHLNESEL 121
HF+ CG + R+TI + + +A++EF + +V A+ +N S
Sbjct: 71 LEAHFKGCGEIVRITIPKDKITKKQKKYVKEVKEILFHAFIEFECAASVANAIVMNGSTF 130
Query: 122 HGRQLKVTVKRTNVPGM 138
RQ+ VT+KRTN PGM
Sbjct: 131 RERQIVVTLKRTNKPGM 147
>gi|345798762|ref|XP_536341.3| PREDICTED: RNA-binding protein 34 [Canis lupus familiaris]
Length = 428
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 19/113 (16%)
Query: 29 EEEAT-ALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-----------QH 76
E AT AL++ A++ + + D A+ SS D RSVFVGN +H
Sbjct: 252 ESSATKALKRNGAQIADGFRIRVDLASETSSR------DKRSVFVGNLPYKVEESAVEEH 305
Query: 77 FQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
F CG++ V I D+ G +G+ YV F ++AV AL LN SEL GR+L+V
Sbjct: 306 FLDCGSIVAVRIVRDRVTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRV 358
>gi|296230931|ref|XP_002760846.1| PREDICTED: RNA-binding protein 34 [Callithrix jacchus]
Length = 429
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 19/120 (15%)
Query: 34 ALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-----------QHFQSCGT 82
AL++ A++ + + D A+ SS D RSVFVGN +HF CG+
Sbjct: 259 ALKRNGAQIADGFRIRVDLASATSSR------DKRSVFVGNLPYKVEESAVEKHFLDCGS 312
Query: 83 VNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQH 141
+ V I D+ G KG+ YV F +++V AL LN SEL GR+L+V ++ N +KQ+
Sbjct: 313 IMAVRIVRDQVTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV-MRSVNKEKLKQN 371
>gi|294924689|ref|XP_002778856.1| Embryonic polyadenylate-binding protein 2-B, putative [Perkinsus
marinus ATCC 50983]
gi|239887665|gb|EER10651.1| Embryonic polyadenylate-binding protein 2-B, putative [Perkinsus
marinus ATCC 50983]
Length = 94
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 90 TDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPG 137
DK+ G PKG+AY+EF AVQ AL LN++ GRQLKV KRTN+PG
Sbjct: 2 VDKYSGHPKGFAYIEFGDEAAVQNALLLNDTMFRGRQLKVLQKRTNLPG 50
>gi|413924472|gb|AFW64404.1| hypothetical protein ZEAMMB73_935050 [Zea mays]
Length = 96
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 3/58 (5%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN 74
ELD+MK +LKEMEEEA ALR M AKV EM DP+ S+ +E+VD+RSV+VGN
Sbjct: 38 ELDEMKRKLKEMEEEAAALRDMQAKVAKEMQGG-DPSI--STAEAKEQVDARSVYVGN 92
>gi|449463793|ref|XP_004149616.1| PREDICTED: uncharacterized protein LOC101209889 [Cucumis sativus]
Length = 706
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDP--AAGGSSLANR--EEVDSRSVFVGN---- 74
+++ E E T + Q N Q P +A G R EE D+R++FV N
Sbjct: 487 VQVMENGEPVTLVNQRKTPASNLQEEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFA 546
Query: 75 -------QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 126
+HF G V +V I TD GQPKG AYVEF++ E+ + AL L+ + R L
Sbjct: 547 ATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRIL 606
Query: 127 KVTVK 131
KV K
Sbjct: 607 KVVRK 611
>gi|431895672|gb|ELK05098.1| RNA-binding protein 34 [Pteropus alecto]
Length = 448
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-------- 74
+ K+ A AL + A++ + + D A+ SS D RSVFVGN
Sbjct: 268 VVFKDENSAARALSRNGAQIADGFRIRVDLASETSSR------DKRSVFVGNLPYKAEEP 321
Query: 75 ---QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
+HF CG+V V I D + G +G+ +V F ++AV AL LN SEL GR+L+V +
Sbjct: 322 AVEEHFLDCGSVVAVRIVRDPRTGVGRGFGFVLFENTDAVHLALKLNNSELMGRKLRV-M 380
Query: 131 KRTNVPGMKQH 141
+ N +KQ+
Sbjct: 381 RSVNKEKLKQN 391
>gi|355715678|gb|AES05401.1| RNA binding motif protein 34 [Mustela putorius furo]
Length = 398
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 19/93 (20%)
Query: 66 DSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEA 113
D RSVFVGN +HF CG++ V I D+ G +G+ YV F ++AV A
Sbjct: 255 DKRSVFVGNLPYKIEESAVEEHFLDCGSIVAVRIVRDRVTGVGRGFGYVLFENTDAVHLA 314
Query: 114 LHLNESELHGRQLKV-------TVKRTNVPGMK 139
L LN SEL GR+L+V +K + PG+K
Sbjct: 315 LKLNNSELMGRKLRVMRSVNKEKLKSNSNPGLK 347
>gi|413924474|gb|AFW64406.1| hypothetical protein ZEAMMB73_935050 [Zea mays]
Length = 101
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 3/58 (5%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN 74
ELD+MK +LKEMEEEA ALR M AKV EM DP+ S+ +E+VD+RSV+VGN
Sbjct: 38 ELDEMKRKLKEMEEEAAALRDMQAKVAKEMQGG-DPSI--STAEAKEQVDARSVYVGN 92
>gi|351694564|gb|EHA97482.1| RNA-binding protein 34 [Heterocephalus glaber]
Length = 428
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-------- 74
+ KE AL++ A++ + + D A+ SS D RSVF+GN
Sbjct: 246 VVFKEESAATKALKRNGAQIADGFRIRVDLASETSSR------DKRSVFIGNLPYKVEET 299
Query: 75 ---QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HF CG++ V I D G KG+ YV F ++AV AL LN SEL GR+L+V
Sbjct: 300 AVEEHFLDCGSIVAVRIVRDPVTGVGKGFGYVLFENTDAVHLALKLNNSELMGRKLRV 357
>gi|426334252|ref|XP_004028672.1| PREDICTED: AT-rich interactive domain-containing protein 4B [Gorilla
gorilla gorilla]
Length = 1500
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 68/139 (48%), Gaps = 21/139 (15%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-------- 74
+ KE AL++ A + + + D A+ SS D RSVFVGN
Sbjct: 1318 VVFKEESAAMQALKRNGAHIADGFRIRVDRASETSSR------DKRSVFVGNLPYKVEES 1371
Query: 75 ---QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
+HF CG++ V I DK G KG+ YV F +++V AL LN SEL GR+L+V +
Sbjct: 1372 AIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV-M 1430
Query: 131 KRTNVPGMKQH--RPRRPN 147
+ N +KQ PR N
Sbjct: 1431 RSVNKEKLKQQNSNPRLKN 1449
>gi|344278331|ref|XP_003410948.1| PREDICTED: RNA-binding protein 34 [Loxodonta africana]
Length = 433
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 13/88 (14%)
Query: 66 DSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEA 113
D RSVFVGN +HF CG+V V I D+ G KG+ YV F ++AV A
Sbjct: 288 DKRSVFVGNLPYKIEESMVEKHFLDCGSVVAVRIVRDQVTGVGKGFGYVLFENTDAVHLA 347
Query: 114 LHLNESELHGRQLKVTVKRTNVPGMKQH 141
L LN SEL GR+L+V ++ N +KQ
Sbjct: 348 LKLNNSELMGRKLRV-MRSVNKEKLKQQ 374
>gi|194206109|ref|XP_001915106.1| PREDICTED: RNA-binding protein 34 [Equus caballus]
Length = 428
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-------- 74
+ K+ A AL++ A++ + + D A+ SS D RSVFVGN
Sbjct: 248 VVFKDDSAAAKALKRNGAQIADGFRIRVDLASETSSR------DKRSVFVGNLPYKVEES 301
Query: 75 ---QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
+HF CG + V I D+ G +G+ YV F ++AV AL LN SEL GR+L+V +
Sbjct: 302 AVEEHFLDCGHIVAVRIVRDQVTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRV-M 360
Query: 131 KRTNVPGMKQH 141
+ N +KQ+
Sbjct: 361 RSVNKEKLKQN 371
>gi|444313531|ref|XP_004177423.1| hypothetical protein TBLA_0A01040 [Tetrapisispora blattae CBS 6284]
gi|387510462|emb|CCH57904.1| hypothetical protein TBLA_0A01040 [Tetrapisispora blattae CBS 6284]
Length = 145
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 12/97 (12%)
Query: 57 SSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFG-QPKGYAYVEF 104
S+ + E D S+F+GN +HF+ G + R+T+ D KGYAYVEF
Sbjct: 26 SNFETQAEADKCSIFIGNIDPSVTPDVIEEHFKVSGQIKRITLFGDGHASHSKGYAYVEF 85
Query: 105 LQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQH 141
+ + AL LN S L+ +++ V KRTN+P K++
Sbjct: 86 ISPSGQENALKLNGSVLNNKRIIVQKKRTNLPRYKRN 122
>gi|123417547|ref|XP_001305136.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121886636|gb|EAX92206.1| hypothetical protein TVAG_107400 [Trichomonas vaginalis G3]
Length = 144
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 52 PAAGGSSLANREEV----DSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQP 96
P A ++ A EV D S++VGN HF CG + ++TI T +
Sbjct: 33 PQAQNTAEAENAEVEKPKDENSIWVGNLDASVTQEKLENHFSCCGKIKKLTIPTKQNPHA 92
Query: 97 KGYAYVEFLQSEAVQEAL-HLNESELHGRQLKVTVKRTNVPGMKQ 140
YAY+EF EA Q A+ LN GR L + KR N PGM++
Sbjct: 93 PKYAYIEFDSKEAAQLAIDSLNNHLFSGRNLNIKPKRENRPGMRR 137
>gi|297829804|ref|XP_002882784.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328624|gb|EFH59043.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 664
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 13/84 (15%)
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAV 110
E+ SR++FV N +HF CG V + TI TD GQP G AY+EF + EA
Sbjct: 501 EDASSRTIFVANVHFGATKDSLSRHFNKCGEVLKATIVTDPATGQPSGSAYIEFTRKEAA 560
Query: 111 QEALHLNESELHGRQLKVTVKRTN 134
+ AL L+ + R LK+ VK +N
Sbjct: 561 ENALSLDGTSFMSRILKI-VKGSN 583
>gi|313239216|emb|CBY14172.1| unnamed protein product [Oikopleura dioica]
Length = 584
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 25/127 (19%)
Query: 64 EVDSRSVFVG-----------NQHFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQ 111
+ D R+VFV +HFQ CGT+ RVTI D+F + KG AY++F + Q
Sbjct: 458 DTDKRTVFVSGLDVITTEPELKEHFQVCGTIVRVTILRDRFTRMSKGCAYIQFATLDQRQ 517
Query: 112 EALHLNESELHGRQLKVTVKRT---------NVPGMKQHRPRRPNPFMVYQSRGAIIPPF 162
A + +E+HG+ ++VT K H+P +P+ +QS P+
Sbjct: 518 TADVFDNTEIHGKTIRVTQKVNRAELHSAPPTATDTAYHKPYKPH----FQSTKPGNNPY 573
Query: 163 LYSPYGY 169
++ GY
Sbjct: 574 TWTRSGY 580
>gi|62078761|ref|NP_001014037.1| RNA-binding protein 34 [Rattus norvegicus]
gi|76363312|sp|Q5M9F1.1|RBM34_RAT RecName: Full=RNA-binding protein 34; AltName: Full=RNA-binding
motif protein 34
gi|56541178|gb|AAH87155.1| RNA binding motif protein 34 [Rattus norvegicus]
gi|149043245|gb|EDL96777.1| RNA binding motif protein 34 [Rattus norvegicus]
Length = 428
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 66/131 (50%), Gaps = 19/131 (14%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-------- 74
+ KE A AL++ A++ + D A S A+R D RSVFVGN
Sbjct: 246 VVFKEERAAAKALQRNGAQIAEGFRIRVDLA---SETASR---DKRSVFVGNLPYRVDES 299
Query: 75 ---QHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
+HF CG++ V I R G +G+ YV F ++AV AL LN SEL GR+L+V +
Sbjct: 300 ALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRV-M 358
Query: 131 KRTNVPGMKQH 141
+ N +KQ
Sbjct: 359 RSVNKEKLKQQ 369
>gi|76363311|sp|Q8C5L7.1|RBM34_MOUSE RecName: Full=RNA-binding protein 34; AltName: Full=RNA-binding
motif protein 34
gi|26346951|dbj|BAC37124.1| unnamed protein product [Mus musculus]
Length = 375
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 66/131 (50%), Gaps = 19/131 (14%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-------- 74
+ K+ A AL++ A++ + D A S A+R D RSVFVGN
Sbjct: 252 VVFKDESAAAKALQRNGAQIAEGFRIRVDLA---SETASR---DKRSVFVGNLPYKIEDS 305
Query: 75 ---QHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
+HF CG++ V I R G +G+ YV F ++AV AL LN SEL GR+L+V +
Sbjct: 306 ALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRV-M 364
Query: 131 KRTNVPGMKQH 141
+ N +KQ
Sbjct: 365 RSVNKEKLKQQ 375
>gi|255544232|ref|XP_002513178.1| poly-A binding protein, putative [Ricinus communis]
gi|223547676|gb|EEF49169.1| poly-A binding protein, putative [Ricinus communis]
Length = 514
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 27/137 (19%)
Query: 63 EEVDSRSVFVGNQHFQSC-----------GTVNRVTIRTDK-FGQPKGYAYVEFLQSEAV 110
E+ DSR++FV N HF + G V +V I D GQP G AY+EF++ EA
Sbjct: 334 EDADSRTIFVSNVHFAATKDSLSRHFNKFGDVLKVVIMADAATGQPMGSAYIEFMRKEAA 393
Query: 111 QEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYG 170
AL L+ + R LKV VKR+ P ++ M++ G P+ + G
Sbjct: 394 DNALSLDGTSFMSRILKV-VKRS--PANQEATAN-----MIWPRGGTRGSPYTAGRFSRG 445
Query: 171 KIPRF-------RMPMR 180
PR R+PM+
Sbjct: 446 PFPRGISGAFRPRLPMK 462
>gi|223999207|ref|XP_002289276.1| poly-a binding protein [Thalassiosira pseudonana CCMP1335]
gi|220974484|gb|EED92813.1| poly-a binding protein [Thalassiosira pseudonana CCMP1335]
Length = 140
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 21 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN------ 74
++ +K MEEEA + Q + A+ A + D S++VG
Sbjct: 25 LQAEIKRMEEEAARIAQETEDLEKPAAAAGGGGEKKDGAAEKASKDGHSIYVGQVDYSTT 84
Query: 75 -----QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEF 104
HF+SCGTV RVTI DKF G+PKG+AY+EF
Sbjct: 85 PEELLAHFESCGTVERVTIVCDKFTGKPKGFAYLEF 120
>gi|354468817|ref|XP_003496847.1| PREDICTED: RNA-binding protein 34-like [Cricetulus griseus]
Length = 425
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 13/88 (14%)
Query: 66 DSRSVFVGN-----------QHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEA 113
D RSVFVGN +HF CG++ V I R + G +G+ YV F ++AV A
Sbjct: 283 DKRSVFVGNLPYKVEEAALEEHFLDCGSIVAVRILRNPQTGVGRGFGYVLFENTDAVHLA 342
Query: 114 LHLNESELHGRQLKVTVKRTNVPGMKQH 141
L LN SEL GR+L+V ++ N +KQ
Sbjct: 343 LKLNNSELMGRKLRV-MRSVNKEKLKQQ 369
>gi|426255548|ref|XP_004021410.1| PREDICTED: RNA-binding protein 34 [Ovis aries]
Length = 427
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 12/75 (16%)
Query: 66 DSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEA 113
D RSVFVGN +HF +CG V V I D+ G +G+ YV F ++AV A
Sbjct: 284 DKRSVFVGNLPYKVEESAVEKHFLACGNVVAVRIVRDQVTGVGRGFGYVLFENTDAVHLA 343
Query: 114 LHLNESELHGRQLKV 128
L LN SEL GR+L+V
Sbjct: 344 LKLNNSELMGRKLRV 358
>gi|449501608|ref|XP_004161415.1| PREDICTED: uncharacterized protein LOC101228197 [Cucumis sativus]
Length = 709
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDP--AAGGSSLANR--EEVDSRSVFVGN---- 74
+++ E E T + Q N Q P +A G R EE D+R++FV N
Sbjct: 487 VQVMENGEPVTLVNQRKTPASNLQEEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFA 546
Query: 75 -------QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 126
+HF G V +V I TD GQPKG AYVEF++ E+ + AL L+ + R L
Sbjct: 547 ATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRIL 606
Query: 127 KVTVKR 132
K R
Sbjct: 607 KSIAGR 612
>gi|42794007|ref|NP_766350.2| RNA-binding protein 34 [Mus musculus]
gi|148679875|gb|EDL11822.1| RNA binding motif protein 34, isoform CRA_a [Mus musculus]
gi|187954471|gb|AAI41279.1| RNA binding motif protein 34 [Mus musculus]
Length = 442
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 66/131 (50%), Gaps = 19/131 (14%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-------- 74
+ K+ A AL++ A++ + D A S A+R D RSVFVGN
Sbjct: 252 VVFKDESAAAKALQRNGAQIAEGFRIRVDLA---SETASR---DKRSVFVGNLPYKIEDS 305
Query: 75 ---QHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
+HF CG++ V I R G +G+ YV F ++AV AL LN SEL GR+L+V +
Sbjct: 306 ALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRV-M 364
Query: 131 KRTNVPGMKQH 141
+ N +KQ
Sbjct: 365 RSVNKEKLKQQ 375
>gi|255711272|ref|XP_002551919.1| KLTH0B02992p [Lachancea thermotolerans]
gi|238933297|emb|CAR21481.1| KLTH0B02992p [Lachancea thermotolerans CBS 6340]
Length = 204
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 28 MEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN----------QHF 77
+ EE + L+ + ++ P G S N + D+RSV+VGN Q F
Sbjct: 33 ITEETSRLKDIEKRMAENAHGAGCP---GFSRFNDQSADARSVYVGNLDPSINAETLQEF 89
Query: 78 --QSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 134
S VNRV I+ +K G KG+A+VEF Q V +A+ L+ ++L G+ LK+ KR
Sbjct: 90 FKGSVSRVNRVEIQINKLTGFAKGFAFVEFAQPRDVMDAIKLSNTKLGGKPLKIVPKR-- 147
Query: 135 VPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYG 168
P Q P R + M ++ PP P+G
Sbjct: 148 -PSFHQESPNRGSHRM-RRATTRTHPPLRGRPHG 179
>gi|440901028|gb|ELR52037.1| RNA-binding protein 34 [Bos grunniens mutus]
Length = 428
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 12/75 (16%)
Query: 66 DSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEA 113
D RSVFVGN +HF +CG V V I D+ G +G+ YV F ++AV A
Sbjct: 285 DKRSVFVGNLPYKVEESAVEKHFLACGNVVAVRIVRDQVTGVGRGFGYVLFENTDAVHLA 344
Query: 114 LHLNESELHGRQLKV 128
L LN SEL GR+L+V
Sbjct: 345 LKLNNSELMGRKLRV 359
>gi|403216662|emb|CCK71158.1| hypothetical protein KNAG_0G01000 [Kazachstania naganishii CBS
8797]
Length = 131
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 53 AAGGSSLA-NREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPK-GY 99
A SLA R E D+RS+FV HF++CG ++R+T+ + K + GY
Sbjct: 25 TANNQSLAIQRAEADTRSIFVRGLSPETGPEVIEDHFKACGPISRITLFSQKRKRNTIGY 84
Query: 100 AYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV 135
AY+EF + AL LN S L+G + V KRTNV
Sbjct: 85 AYIEFEAVQGRANALDLNNSILNGYSITVKKKRTNV 120
>gi|148679876|gb|EDL11823.1| RNA binding motif protein 34, isoform CRA_b [Mus musculus]
Length = 432
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 66/131 (50%), Gaps = 19/131 (14%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-------- 74
+ K+ A AL++ A++ + D A S A+R D RSVFVGN
Sbjct: 242 VVFKDESAAAKALQRNGAQIAEGFRIRVDLA---SETASR---DKRSVFVGNLPYKIEDS 295
Query: 75 ---QHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
+HF CG++ V I R G +G+ YV F ++AV AL LN SEL GR+L+V +
Sbjct: 296 ALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRV-M 354
Query: 131 KRTNVPGMKQH 141
+ N +KQ
Sbjct: 355 RSVNKEKLKQQ 365
>gi|334322146|ref|XP_001378610.2| PREDICTED: RNA-binding protein 34-like [Monodelphis domestica]
Length = 510
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 42/73 (57%), Gaps = 12/73 (16%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALH 115
RSVFVGN +HF CG+V V I +K G KG YV F ++AVQ AL
Sbjct: 275 RSVFVGNLPYKIEEAAIQEHFSDCGSVLAVKIVRNKVTGVGKGCGYVLFENTDAVQLALR 334
Query: 116 LNESELHGRQLKV 128
LN SEL GR+L+V
Sbjct: 335 LNNSELMGRKLRV 347
>gi|224104037|ref|XP_002313291.1| predicted protein [Populus trichocarpa]
gi|222849699|gb|EEE87246.1| predicted protein [Populus trichocarpa]
Length = 762
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
Query: 47 ASKQDPAAGGSSLANREEVDSRSVFVGNQHFQSC-----------GTVNRVTIRTDK-FG 94
+S P G L E+ DSR++FV N HF + G V +V I TD G
Sbjct: 528 SSASGPYTAGCPL---EDADSRTIFVSNVHFAATKDSLSRHFNKFGEVLKVVIVTDAATG 584
Query: 95 QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQ 140
QP G AYVEF+ EA AL L+ + R LKV T + KQ
Sbjct: 585 QPTGSAYVEFMHKEAADNALSLDGTSFMSRILKVMNIETILSCYKQ 630
>gi|302823293|ref|XP_002993300.1| hypothetical protein SELMODRAFT_449095 [Selaginella moellendorffii]
gi|300138873|gb|EFJ05625.1| hypothetical protein SELMODRAFT_449095 [Selaginella moellendorffii]
Length = 773
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 80/171 (46%), Gaps = 41/171 (23%)
Query: 17 ELDDMKIRLKEMEEEATALRQMH---AKVGNEMASKQDPAA---------GGSSL----- 59
++ +MK R++++E E T LR AKV + ++ PAA +S+
Sbjct: 483 DVTEMKRRMRQVELEVTKLRTKQDEAAKVSEKSSAPHPPAATTNIPSVPAATTSMQTAPL 542
Query: 60 -------ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYA 100
++ ++ DS+ + V N HF SCG V +VT+ TD G+PKG A
Sbjct: 543 TSFKTPQSSSDDTDSKVILVTNVHFATTKEAISTHFGSCGEVVKVTMLTDGVSGKPKGSA 602
Query: 101 YVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV-----PGMKQHRPRRP 146
YVEF +A AL LNES L R ++V K NV P RPR P
Sbjct: 603 YVEFSSKDAADRALSLNESSLLSRPIRVARKDANVAETSSPAAAVMRPRPP 653
>gi|395531593|ref|XP_003767862.1| PREDICTED: RNA-binding protein 34 [Sarcophilus harrisii]
Length = 438
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALH 115
RSVFVGN +HF CG+V V + +K G KG YV F ++AVQ AL
Sbjct: 294 RSVFVGNLPYKIEETAIQEHFSDCGSVLAVKLVRNKVTGIGKGCGYVLFENTDAVQLALK 353
Query: 116 LNESELHGRQLKVTVKRTNVPGMKQHRP 143
LN SEL GR+L+V N H P
Sbjct: 354 LNNSELMGRKLRVKRYVNNEKAKLSHTP 381
>gi|302772723|ref|XP_002969779.1| hypothetical protein SELMODRAFT_410730 [Selaginella moellendorffii]
gi|300162290|gb|EFJ28903.1| hypothetical protein SELMODRAFT_410730 [Selaginella moellendorffii]
Length = 771
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 80/171 (46%), Gaps = 41/171 (23%)
Query: 17 ELDDMKIRLKEMEEEATALRQMH---AKVGNEMASKQDPAA---------GGSSL----- 59
++ +MK R++++E E T LR AKV + ++ PAA +S+
Sbjct: 481 DVTEMKRRMRQVELEVTKLRTKQDEAAKVSEKSSAPHPPAATTNIPSVPAATTSMQTAPL 540
Query: 60 -------ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYA 100
++ ++ DS+ + V N HF SCG V +VT+ TD G+PKG A
Sbjct: 541 TSFKTPQSSSDDTDSKVILVTNVHFATTKEAISTHFGSCGEVVKVTMLTDGVSGKPKGSA 600
Query: 101 YVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV-----PGMKQHRPRRP 146
YVEF +A AL LNES L R ++V K NV P RPR P
Sbjct: 601 YVEFSSKDAADRALSLNESSLLSRPIRVARKDANVAETSSPAAAVMRPRPP 651
>gi|417410496|gb|JAA51720.1| Putative splicing factor, partial [Desmodus rotundus]
Length = 412
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 19/131 (14%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-------- 74
+ K+ AL + A++ + + D A+ SS D RSVFVGN
Sbjct: 232 VVFKDERAATKALNRNGAQIADGFRVRVDLASETSSR------DKRSVFVGNLPYKVGES 285
Query: 75 ---QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
HF CG + V I D G +G+ YV F ++AV AL LN SEL GR+L+V +
Sbjct: 286 AVEHHFLDCGNIVAVRIVRDPLTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRV-M 344
Query: 131 KRTNVPGMKQH 141
+ N +KQ+
Sbjct: 345 RSVNKEKLKQN 355
>gi|363731894|ref|XP_423974.3| PREDICTED: RNA-binding protein 34 [Gallus gallus]
Length = 405
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 67/139 (48%), Gaps = 20/139 (14%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-------- 74
+ KE + AL++ +V + + D A+ S N+ RSVF+GN
Sbjct: 225 VVFKEERDAVKALKKNGTEVASGFHIRVDSASKNSLHDNK-----RSVFLGNLAYDISDS 279
Query: 75 ---QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV-- 128
+HF CG V V I D+ G KG+ YV F ++AV AL LN S+L GR+L+V
Sbjct: 280 AVREHFADCGDVVAVRIVRDRQSGMGKGFGYVLFENTDAVHLALKLNNSDLMGRKLRVKR 339
Query: 129 TVKRTNVPGMK-QHRPRRP 146
V++ P RPR P
Sbjct: 340 CVEKGRAPQRNTTTRPRGP 358
>gi|432106224|gb|ELK32110.1| AT-rich interactive domain-containing protein 4B [Myotis davidii]
Length = 1743
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 47/88 (53%), Gaps = 13/88 (14%)
Query: 66 DSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEA 113
D RSVFVGN HF CG + V I D G +G+ YV F ++AV A
Sbjct: 1600 DKRSVFVGNLPYKIEDAVVEDHFLDCGNIVAVRIVRDPLTGVGRGFGYVLFENTDAVHLA 1659
Query: 114 LHLNESELHGRQLKVTVKRTNVPGMKQH 141
L LN SEL GR+L+V ++ N +KQ+
Sbjct: 1660 LKLNNSELMGRKLRV-MRSVNKDKLKQN 1686
>gi|294882178|ref|XP_002769641.1| glycine-rich RNA-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239873203|gb|EER02359.1| glycine-rich RNA-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 88
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 31/43 (72%)
Query: 95 QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPG 137
PKG+AY+EF AVQ AL LN++ GRQLKV KRTN+PG
Sbjct: 2 HPKGFAYIEFGDEAAVQNALLLNDTMFRGRQLKVLQKRTNLPG 44
>gi|224059648|ref|XP_002299951.1| predicted protein [Populus trichocarpa]
gi|222847209|gb|EEE84756.1| predicted protein [Populus trichocarpa]
Length = 678
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 73/153 (47%), Gaps = 33/153 (21%)
Query: 49 KQDPAAGGSSLANR--EEVDSRSVFVGNQHFQSC-----------GTVNRVTIRTDK-FG 94
+Q+P SS + R E+ DSR++FV N HF + G V +V + TD G
Sbjct: 484 QQEPQKPPSSASGRPLEDADSRTIFVSNVHFAATKDSLSRHFNKFGEVLKVVLVTDAATG 543
Query: 95 QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQ- 153
QP G AYVEF++ EA AL L+ + R +KV +KR++ + +P M +
Sbjct: 544 QPTGSAYVEFMRKEAADNALSLDGTSFMSRIVKV-MKRSS-------SNQEASPVMTWPR 595
Query: 154 -SRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 185
SRG S Y G+ R P R +P +
Sbjct: 596 ISRG--------SSYAAGRFARTPFP-RGTPIF 619
>gi|449278094|gb|EMC86061.1| RNA-binding protein 34, partial [Columba livia]
Length = 184
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 22/117 (18%)
Query: 28 MEEEATALRQMHAKVGNEMAS----KQDPAAGGSSLANREEVDSRSVFVGN--------- 74
+EE A++ ++ G E+A + D A+ SS N+ RSVF+GN
Sbjct: 66 FKEECDAIKALNEN-GTEIARGFHIRVDIASKTSSHDNK-----RSVFLGNLSYDISNDA 119
Query: 75 --QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HF CG V V I D K G KG+ YV F ++AV AL LN+S L GR+++V
Sbjct: 120 VREHFAVCGEVVAVRIVRDRKTGLGKGFGYVLFENTDAVHLALKLNDSVLLGRKIRV 176
>gi|410975075|ref|XP_003993961.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 34 [Felis
catus]
Length = 433
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 12/75 (16%)
Query: 66 DSRSVFVGN-----------QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEA 113
D RSVFVGN +HF CG++ V I D G +G+ YV F ++AV A
Sbjct: 290 DKRSVFVGNLPYKVEESAIEEHFLDCGSIVAVRIVRDPATGVGRGFGYVLFENTDAVHLA 349
Query: 114 LHLNESELHGRQLKV 128
L LN SEL GR+L+V
Sbjct: 350 LKLNNSELMGRKLRV 364
>gi|326915530|ref|XP_003204069.1| PREDICTED: RNA-binding protein 34-like [Meleagris gallopavo]
Length = 475
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 22/117 (18%)
Query: 28 MEEEATALRQMHAKVGNEMAS----KQDPAAGGSSLANREEVDSRSVFVGN--------- 74
+EE A++ + K G E+AS + D A+ S N+ RSVF+GN
Sbjct: 219 FKEEHAAVKALK-KNGTEVASGFHIRVDSASKNSLHDNK-----RSVFLGNLAYDISDSA 272
Query: 75 --QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HF CG V V I D+ G KG+ YV F ++AV AL LN S+L GR+L+V
Sbjct: 273 VREHFADCGDVVAVRIVRDRQSGMGKGFGYVLFENTDAVHLALKLNNSDLMGRKLRV 329
>gi|449531099|ref|XP_004172525.1| PREDICTED: uncharacterized protein LOC101223830, partial [Cucumis
sativus]
Length = 500
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 76 HFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
HF +CG +NRV+I D + G KG AY++F S++ +AL LN SELHG L V
Sbjct: 363 HFGACGDINRVSIPKDYETGNVKGMAYMDFGDSDSFNKALELNGSELHGNYLTV 416
>gi|291402150|ref|XP_002717371.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Oryctolagus
cuniculus]
Length = 430
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 41/75 (54%), Gaps = 12/75 (16%)
Query: 66 DSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEA 113
D RSVFVGN +HF CG + V I D+ G KG+ YV F ++V A
Sbjct: 284 DKRSVFVGNLPYKVEETAVEEHFLDCGNIVAVRIVRDQITGIGKGFGYVLFENKDSVHLA 343
Query: 114 LHLNESELHGRQLKV 128
L LN SEL GR+L+V
Sbjct: 344 LKLNNSELMGRKLRV 358
>gi|348538194|ref|XP_003456577.1| PREDICTED: RNA-binding protein 34-like [Oreochromis niloticus]
Length = 425
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 12/73 (16%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH 115
RSVFVGN +HF+ CGTV V + DK G KG+ YV F +++VQ AL
Sbjct: 263 RSVFVGNLSFDINELTFRRHFEECGTVEAVRLVRDKNSGLGKGFGYVLFESTDSVQLALK 322
Query: 116 LNESELHGRQLKV 128
L+ S+L GR ++V
Sbjct: 323 LDGSKLEGRSIRV 335
>gi|449461723|ref|XP_004148591.1| PREDICTED: uncharacterized protein LOC101206235 [Cucumis sativus]
Length = 737
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 76 HFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
HF +CG +NRV+I D + G KG AY++F S++ +AL LN SELHG L V
Sbjct: 600 HFGACGDINRVSIPKDYETGNVKGMAYMDFGDSDSFNKALELNGSELHGNYLTV 653
>gi|392592716|gb|EIW82042.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 589
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 18/107 (16%)
Query: 59 LANREEVDS----RSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYV 102
+AN + +D +S+FVG + F CG V T++ D+ G+ +G+ YV
Sbjct: 320 IANGDAMDVDNEIKSIFVGRLSWNVDNDWLAKEFAECGEVVSATVQMDRSTGRSRGFGYV 379
Query: 103 EFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPF 149
F SEAV++A+ LN E+ GR V V ++N P R +R F
Sbjct: 380 HFSTSEAVEKAIELNGKEIDGRA--VNVDKSNPPNKDASREKRAKTF 424
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 13/75 (17%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEA- 113
S ++FVGN + F G V V + TD+ G+PKG+ YVEF E ++A
Sbjct: 432 SATLFVGNLSFGMNDDALWEAFSEHGEVKNVRLPTDRESGRPKGFGYVEFSDVETAKKAH 491
Query: 114 LHLNESELHGRQLKV 128
+ EL GR +++
Sbjct: 492 AAMQGVELDGRSVRL 506
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAV 110
EE + +VFVGN F CGTV I TDK G+ KG+ YV F ++A+
Sbjct: 178 EEPVNSTVFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYVTFESADAL 237
Query: 111 QEALHLNESELHGRQLKVTVKRTNVP--GMKQHRPRRP 146
A+ L +EL GR+++V V P G +Q R P
Sbjct: 238 TAAMALTGTELDGREIRVDVSTPKPPRDGNRQGRKEAP 275
>gi|410917640|ref|XP_003972294.1| PREDICTED: RNA-binding protein 34-like [Takifugu rubripes]
Length = 399
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 14/95 (14%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
RSVFVGN HF+ CG+V V +R G KG+ Y+ F ++AVQ AL
Sbjct: 250 RSVFVGNLSFDINELAFRHHFEDCGSVEAVRLVRDQNSGLGKGFGYILFKSADAVQLALK 309
Query: 116 LNESELHGRQLKV--TVKRTNVPGMKQHRPRRPNP 148
L+ S+L GR+++V ++K + G K + P P
Sbjct: 310 LDGSKLQGRRIRVRRSLKESENKGAKGRFGKGPAP 344
>gi|432104867|gb|ELK31379.1| Embryonic polyadenylate-binding protein 2 [Myotis davidii]
Length = 161
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 76 HFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
+F CG V +VTI +KF G PKGYAY+EF + Q A+ L++S GR +KV +
Sbjct: 45 YFNICGEVQQVTILCNKFSGHPKGYAYIEFATESSAQAAVGLDKSIFQGRVIKVLL 100
>gi|242082291|ref|XP_002445914.1| hypothetical protein SORBIDRAFT_07g027950 [Sorghum bicolor]
gi|241942264|gb|EES15409.1| hypothetical protein SORBIDRAFT_07g027950 [Sorghum bicolor]
Length = 694
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 62/125 (49%), Gaps = 19/125 (15%)
Query: 28 MEEEATALRQMHAKVGNEMASKQDPAAGGS-----SLAN-REEVDSRSVFVGNQHFQSC- 80
M AT L +VG+ A K + S S A+ E+ DSR+++V N HF +
Sbjct: 489 MNSNATTLATNAKEVGHAEAQKDSQRSAPSVPVSYSTAHPTEDADSRTLYVSNVHFAATK 548
Query: 81 ----------GTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 129
G V +V I T+ GQP G AYVEFL E+ + AL LN + R LKV
Sbjct: 549 DSLSRHFNKFGAVLKVVIVTNAATGQPTGSAYVEFLHKESAERALSLNGTSFMTRILKV- 607
Query: 130 VKRTN 134
V+R++
Sbjct: 608 VRRSS 612
>gi|83032973|ref|XP_729274.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23486584|gb|EAA20839.1| RNA recognition motif [Plasmodium yoelii yoelii]
Length = 77
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 77 FQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
F CG +NRVTI +K G KGYAY+EF +V+ AL L+ES RQ+KV +
Sbjct: 22 FSECGIINRVTILVNKNTGHSKGYAYIEFADPSSVRTALSLSESFFKKRQIKVCL 76
>gi|115477168|ref|NP_001062180.1| Os08g0504600 [Oryza sativa Japonica Group]
gi|42407676|dbj|BAD08825.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113624149|dbj|BAF24094.1| Os08g0504600 [Oryza sativa Japonica Group]
Length = 684
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 13/84 (15%)
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAV 110
E+ DSR+++V N +HF G V +V I T+ GQP G AYVEFL E+
Sbjct: 523 EDADSRTLYVSNVHFGATKDALSRHFNKFGAVLKVVIVTNAATGQPTGSAYVEFLHKESA 582
Query: 111 QEALHLNESELHGRQLKVTVKRTN 134
+ AL LN + R LKV V+R++
Sbjct: 583 ERALSLNGTSFMARILKV-VRRSS 605
>gi|327262180|ref|XP_003215903.1| PREDICTED: RNA-binding protein 34-like [Anolis carolinensis]
Length = 377
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 41/75 (54%), Gaps = 12/75 (16%)
Query: 66 DSRSVFVGN-----------QHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEA 113
+ RSVFVGN HF CG V V I R + G KG+ YV F ++AV A
Sbjct: 234 NKRSVFVGNLPYAIDDDTVRTHFSQCGNVMGVRIVRDQRTGIGKGFGYVLFETTDAVHLA 293
Query: 114 LHLNESELHGRQLKV 128
L LN +EL GR+L+V
Sbjct: 294 LKLNNAELEGRKLRV 308
>gi|218201413|gb|EEC83840.1| hypothetical protein OsI_29794 [Oryza sativa Indica Group]
gi|222640831|gb|EEE68963.1| hypothetical protein OsJ_27861 [Oryza sativa Japonica Group]
Length = 725
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 13/84 (15%)
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAV 110
E+ DSR+++V N +HF G V +V I T+ GQP G AYVEFL E+
Sbjct: 564 EDADSRTLYVSNVHFGATKDALSRHFNKFGAVLKVVIVTNAATGQPTGSAYVEFLHKESA 623
Query: 111 QEALHLNESELHGRQLKVTVKRTN 134
+ AL LN + R LKV V+R++
Sbjct: 624 ERALSLNGTSFMARILKV-VRRSS 646
>gi|392591591|gb|EIW80918.1| hypothetical protein CONPUDRAFT_103939 [Coniophora puteana
RWD-64-598 SS2]
Length = 1056
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%)
Query: 77 FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV 135
F++ GTVN V + TDK GQ KG+A+VEF + Q AL N EL R++ VT+ + V
Sbjct: 827 FKTYGTVNDVRLVTDKNGQSKGFAFVEFESETSAQAALSANNYELRSRRIAVTLADSRV 885
>gi|413925276|gb|AFW65208.1| hypothetical protein ZEAMMB73_925630 [Zea mays]
Length = 695
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 13/84 (15%)
Query: 63 EEVDSRSVFVGNQHFQSC-----------GTVNRVTIRTDK-FGQPKGYAYVEFLQSEAV 110
E+ DSR+++V N HF + G V +V I T+ GQP G AYVEFL E+
Sbjct: 531 EDADSRTLYVNNVHFAATKDSLSRHFNKFGAVLKVVIVTNAATGQPTGSAYVEFLHKESA 590
Query: 111 QEALHLNESELHGRQLKVTVKRTN 134
+ AL LN + R LKV V+R++
Sbjct: 591 ERALSLNGTSFMTRILKV-VRRSS 613
>gi|413918641|gb|AFW58573.1| hypothetical protein ZEAMMB73_910026 [Zea mays]
Length = 199
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 47 ASKQDPAAGGSSLANREEV-DSRSVFVGNQHFQSC-----------GTVNRVTIRTDKF- 93
A K AAG ++ E DSR+VFV N HF S G V + I TD
Sbjct: 4 AQKASGAAGSNTTGQPEGGPDSRTVFVSNVHFGSSKDALSRHFNKFGAVLKTHIVTDGVT 63
Query: 94 GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 134
GQ G AY+EFL E+ ++AL LN + R LKV K +
Sbjct: 64 GQSTGSAYIEFLHKESAEQALTLNGTSFMSRILKVVRKSST 104
>gi|403342322|gb|EJY70479.1| hypothetical protein OXYTRI_08772 [Oxytricha trifallax]
Length = 471
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 11/95 (11%)
Query: 47 ASKQDPAAGGSSLANREEVDSRSVFVGNQHFQS-----------CGTVNRVTIRTDKFGQ 95
A K++ G + +E+ S +VF+GN + + CG + V I + G+
Sbjct: 265 AEKREKKTGDENGEKKEQTKSSTVFIGNLSYSTNEQNIRKLLKDCGEIKGVRIALGEDGK 324
Query: 96 PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
KG+A+VEF +E+ ++A+ N ++L GR +KV +
Sbjct: 325 MKGFAHVEFEDAESAEKAMKFNGADLDGRNIKVDI 359
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 15/75 (20%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTI-RTDKFGQPKGYAYVEF-LQSEAVQEA 113
S +FVGN F++ GT+ V+I + K + KGYA+++F ++EA +
Sbjct: 185 STEIFVGNIPFTTDAETLKAKFEAIGTIVNVSIPMSGK--RMKGYAFIKFSTRAEAEKAV 242
Query: 114 LHLNESELHGRQLKV 128
LN+ + GRQLKV
Sbjct: 243 KKLNDFDFDGRQLKV 257
>gi|440302481|gb|ELP94788.1| RNA-binding protein SGN1, putative [Entamoeba invadens IP1]
Length = 191
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 12/89 (13%)
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAV 110
++E D+RS+ V N Q F + G V VTI DK G+PK YAY+E E+
Sbjct: 57 QKERDNRSICVRNLDYSITKEQLEQLFSTVGDVKTVTIPVDKAGKPKAYAYIELDSVESR 116
Query: 111 QEAL-HLNESELHGRQLKVTVKRTNVPGM 138
+ A+ L S+L+ R++ V KRTN G+
Sbjct: 117 ERAVTSLTGSKLNDREITVEKKRTNKMGL 145
>gi|413918640|gb|AFW58572.1| hypothetical protein ZEAMMB73_910026 [Zea mays]
Length = 390
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 49/100 (49%), Gaps = 13/100 (13%)
Query: 47 ASKQDPAAGGSSLANREEV-DSRSVFVGNQHFQSC-----------GTVNRVTIRTDKF- 93
A K AAG ++ E DSR+VFV N HF S G V + I TD
Sbjct: 195 AQKASGAAGSNTTGQPEGGPDSRTVFVSNVHFGSSKDALSRHFNKFGAVLKTHIVTDGVT 254
Query: 94 GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRT 133
GQ G AY+EFL E+ ++AL LN + R LKV K +
Sbjct: 255 GQSTGSAYIEFLHKESAEQALTLNGTSFMSRILKVVRKSS 294
>gi|145495181|ref|XP_001433584.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400702|emb|CAK66187.1| unnamed protein product [Paramecium tetraurelia]
Length = 156
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 12/84 (14%)
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQ 111
+++D S+FV N ++F+ CGT+ +VT+R+DK Y+YV+F + +V+
Sbjct: 35 KDIDLSSIFVRNLDENTTEDDLKEYFKDCGTIVKVTLRSDK-NTGTLYSYVQFQEQGSVE 93
Query: 112 EALHLNESELHGRQLKVTVKRTNV 135
+AL L+E + G+++ V KRTN+
Sbjct: 94 DALVLSEGIIRGKKILVFQKRTNL 117
>gi|156840954|ref|XP_001643854.1| hypothetical protein Kpol_499p24 [Vanderwaltozyma polyspora DSM
70294]
gi|156114481|gb|EDO15996.1| hypothetical protein Kpol_499p24 [Vanderwaltozyma polyspora DSM
70294]
Length = 119
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 13/90 (14%)
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK--FGQPKGYAYVEFLQ 106
+ R++ D +S+FV N + F++CG + R+TI DK G+AYVEF
Sbjct: 15 SKRKDSDQKSIFVSNISLEITPEVIDELFRNCGDIQRITILYDKNTHSNKGGHAYVEFDS 74
Query: 107 SEAVQEALHLNESELHGRQLKVTVKRTNVP 136
+ + AL LN GR+L + KRTN+P
Sbjct: 75 VRSKENALELNGIIHEGRKLIIRPKRTNIP 104
>gi|226494638|ref|NP_001148871.1| RNA recognition motif family protein [Zea mays]
gi|195622800|gb|ACG33230.1| RNA recognition motif family protein [Zea mays]
Length = 706
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 49/100 (49%), Gaps = 13/100 (13%)
Query: 47 ASKQDPAAGGSSLANREEV-DSRSVFVGNQHFQSC-----------GTVNRVTIRTDKF- 93
A K AAG ++ E DSR+VFV N HF S G V + I TD
Sbjct: 511 AQKASGAAGSNTTGQPEGGPDSRTVFVSNVHFGSSKDALSRHFNKFGAVLKTHIVTDGVT 570
Query: 94 GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRT 133
GQ G AY+EFL E+ ++AL LN + R LKV K +
Sbjct: 571 GQSTGSAYIEFLHKESAEQALTLNGTSFMSRILKVVRKSS 610
>gi|413918635|gb|AFW58567.1| RNA recognition motif family protein [Zea mays]
Length = 706
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 49/100 (49%), Gaps = 13/100 (13%)
Query: 47 ASKQDPAAGGSSLANREEV-DSRSVFVGNQHFQSC-----------GTVNRVTIRTDKF- 93
A K AAG ++ E DSR+VFV N HF S G V + I TD
Sbjct: 511 AQKASGAAGSNTTGQPEGGPDSRTVFVSNVHFGSSKDALSRHFNKFGAVLKTHIVTDGVT 570
Query: 94 GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRT 133
GQ G AY+EFL E+ ++AL LN + R LKV K +
Sbjct: 571 GQSTGSAYIEFLHKESAEQALTLNGTSFMSRILKVVRKSS 610
>gi|413918637|gb|AFW58569.1| hypothetical protein ZEAMMB73_910026 [Zea mays]
Length = 588
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 48/98 (48%), Gaps = 13/98 (13%)
Query: 47 ASKQDPAAGGSSLANREEV-DSRSVFVGNQHFQSC-----------GTVNRVTIRTDKF- 93
A K AAG ++ E DSR+VFV N HF S G V + I TD
Sbjct: 393 AQKASGAAGSNTTGQPEGGPDSRTVFVSNVHFGSSKDALSRHFNKFGAVLKTHIVTDGVT 452
Query: 94 GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVK 131
GQ G AY+EFL E+ ++AL LN + R LKV K
Sbjct: 453 GQSTGSAYIEFLHKESAEQALTLNGTSFMSRILKVVRK 490
>gi|294951822|ref|XP_002787139.1| nucleolar protein, putative [Perkinsus marinus ATCC 50983]
gi|239901796|gb|EER18935.1| nucleolar protein, putative [Perkinsus marinus ATCC 50983]
Length = 756
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 12/74 (16%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL 114
S SVFVGN + F CG++ R + TD+ G P+G+AY++F ++ + A
Sbjct: 616 SASVFVGNLPWSMTQDWLYEVFGDCGSITRCFMPTDRETGNPRGFAYIDFDTEDSAENAT 675
Query: 115 HLNESELHGRQLKV 128
L+ ++L GRQ++V
Sbjct: 676 KLSGTDLEGRQIRV 689
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 12/74 (16%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEAL 114
S+SVF+GN Q F CG + RV+I TD + G+ KG+A+++F ++ ++A+
Sbjct: 511 SKSVFIGNLPFSMTKEWLEQIFSWCGDIERVSIPTDWESGKIKGFAFLDFADEDSAEKAV 570
Query: 115 HLNESELHGRQLKV 128
N + GR L++
Sbjct: 571 GKNGEDCEGRDLRI 584
>gi|348575610|ref|XP_003473581.1| PREDICTED: RNA-binding protein 34-like [Cavia porcellus]
Length = 430
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 13/84 (15%)
Query: 70 VFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLN 117
VFVGN +HF CG++ V + D+ G KG+ YV F ++AV AL LN
Sbjct: 288 VFVGNLPYKVEETAVKEHFLDCGSIVAVRLVRDRVTGVGKGFGYVLFENTDAVHLALKLN 347
Query: 118 ESELHGRQLKVTVKRTNVPGMKQH 141
SEL GR+L+V ++ N +KQ+
Sbjct: 348 NSELMGRKLRV-MRSVNKEKLKQN 370
>gi|357473909|ref|XP_003607239.1| RNA-binding protein [Medicago truncatula]
gi|355508294|gb|AES89436.1| RNA-binding protein [Medicago truncatula]
Length = 635
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQ 111
E S+++FVGN + FQ CG V V +D+ G+ KG+ +VEF +EA Q
Sbjct: 371 ENSGSKTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQ 430
Query: 112 EALHLNESELHGRQLKVTVKR 132
AL +N EL R +++ + R
Sbjct: 431 SALEMNGQELLQRAVRLDLAR 451
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 75 QHFQ-SCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HF +CG RV+I D + G KG+AY++F S++ +AL L+ESEL G QL V
Sbjct: 497 EHFGGTCGEPTRVSIPKDFESGYSKGFAYMDFKDSDSFSKALELHESELDGYQLSV 552
>gi|357473911|ref|XP_003607240.1| RNA-binding protein [Medicago truncatula]
gi|355508295|gb|AES89437.1| RNA-binding protein [Medicago truncatula]
Length = 623
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQ 111
E S+++FVGN + FQ CG V V +D+ G+ KG+ +VEF +EA Q
Sbjct: 359 ENSGSKTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQ 418
Query: 112 EALHLNESELHGRQLKVTVKR 132
AL +N EL R +++ + R
Sbjct: 419 SALEMNGQELLQRAVRLDLAR 439
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 75 QHFQ-SCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HF +CG RV+I D + G KG+AY++F S++ +AL L+ESEL G QL V
Sbjct: 485 EHFGGTCGEPTRVSIPKDFESGYSKGFAYMDFKDSDSFSKALELHESELDGYQLSV 540
>gi|452840079|gb|EME42017.1| hypothetical protein DOTSEDRAFT_72945 [Dothistroma septosporum
NZE10]
Length = 339
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 14/89 (15%)
Query: 59 LANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQ 106
+A RE+ R VF+GN + F SCG V + DK GQPKG+ ++E+
Sbjct: 1 MATREK-GGRVVFIGNIPYGVSEEMIMEIFSSCGKVMNFRLVYDKETGQPKGFGFLEYSD 59
Query: 107 SEAVQEAL-HLNESELHGRQLKVTVKRTN 134
+++ Q A+ +LNE EL+GR L+V N
Sbjct: 60 TDSAQSAIRNLNEYELNGRTLRVDFSNDN 88
>gi|357473893|ref|XP_003607231.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355508286|gb|AES89428.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 643
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQ 111
E S+++FVGN + FQ CG V V +D+ G+ KG+ +VEF +EA Q
Sbjct: 379 ENSGSKTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQ 438
Query: 112 EALHLNESELHGRQLKVTVKR 132
AL +N EL R +++ + R
Sbjct: 439 SALEMNGQELLQRAVRLDLAR 459
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 75 QHFQ-SCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HF +CG RV+I D + G KG+AY++F S++ +AL L+ESEL G QL V
Sbjct: 505 EHFGGTCGEPTRVSIPKDFESGYSKGFAYMDFKDSDSFSKALELHESELDGYQLSV 560
>gi|294933049|ref|XP_002780572.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
gi|239890506|gb|EER12367.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
Length = 540
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 12/74 (16%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL 114
S SVFVGN + F CG++ R + TD+ G P+G+AY++F ++ ++A
Sbjct: 400 SASVFVGNLPWSMTQEWLSEVFGDCGSITRCFMPTDRETGNPRGFAYIDFDTEDSAEKAT 459
Query: 115 HLNESELHGRQLKV 128
L+ ++L GRQ++V
Sbjct: 460 KLSGTDLEGRQIRV 473
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 12/74 (16%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEAL 114
S+SVFVGN Q F CG + RV++ TD + G+ KG+A+++F ++ ++A+
Sbjct: 293 SKSVFVGNLPFSMTKEWLEQIFSWCGDIERVSLPTDWESGKIKGFAFLDFADEDSAEKAV 352
Query: 115 HLNESELHGRQLKV 128
N + GR L+V
Sbjct: 353 GKNGEDCEGRDLRV 366
>gi|940288|gb|AAA74208.1| protein localized in the nucleoli of pea nuclei; ORF; putative
[Pisum sativum]
Length = 611
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 11/77 (14%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
S+++FVGN FQ CG V V + +D+ G+ KG+ +VEF +EA Q AL
Sbjct: 354 SKTLFVGNLSFSVQRSDIESFFQECGEVVDVRLASDEDGRFKGFGHVEFATAEAAQSALE 413
Query: 116 LNESELHGRQLKVTVKR 132
LN EL R +++ + R
Sbjct: 414 LNGQELLQRGVRLDLAR 430
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 75 QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
QHF SCG +RV+I D G KG+AY++F S++ +A+ L+ SEL G L +
Sbjct: 473 QHFASCGQASRVSIPKDYDTGYSKGFAYMDFKDSDSFNKAIELHGSELDGYPLSI 527
>gi|313228854|emb|CBY18005.1| unnamed protein product [Oikopleura dioica]
Length = 314
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 73/143 (51%), Gaps = 19/143 (13%)
Query: 13 NKQVELDDMKIRLKEMEEEATALRQMHA----KVGNEMASKQDPAAGGSSLANR-EEVDS 67
+K +++ +K +L ME E + LR+MH K+ + ++++ + + + R +E D+
Sbjct: 164 DKSSDINSLKKKLAMMERETSRLREMHKLRLKKLETKQRAQEERSKRDAEIQRRQDEEDA 223
Query: 68 RSVFVGN-----------QHFQSCGTVNRVTIRTDK--FGQPKGYAYVEFLQSEAVQEAL 114
R+++V N HF G + R+ + D G +G+ ++ F E V+ A
Sbjct: 224 RTIYVRNLNPKTTEQQLRDHFSVFGAIKRIVLPQDAHAIGSNRGFTFITFAGKEPVEVAC 283
Query: 115 HLNESELHGRQLKVTVKRTNVPG 137
L+ + LH R +KV V +TN+ G
Sbjct: 284 SLDGTLLHERSIKV-VPKTNMMG 305
>gi|302803765|ref|XP_002983635.1| hypothetical protein SELMODRAFT_234317 [Selaginella moellendorffii]
gi|300148472|gb|EFJ15131.1| hypothetical protein SELMODRAFT_234317 [Selaginella moellendorffii]
Length = 573
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 74 NQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HF+SCGT+ RV I TD+ G KG+AY+EF A +A L+ S+L G L V
Sbjct: 438 TKHFKSCGTIERVKIPTDRETGNIKGFAYIEFSTDGAPAKAKELHGSDLDGSNLVV 493
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 19/115 (16%)
Query: 47 ASKQDPAAGGSSL----ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTD 91
A+KQ PA+ L +E +S+++FV N Q+F+ G V V I
Sbjct: 291 AAKQAPASKKQKLEVKTPAKEGGESKTLFVRNIPFSVTDEDLAQYFEDAGEVVGVRIAQG 350
Query: 92 KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV---KRTNVPGMKQHRP 143
G PKG+A+VEF A Q+AL+ + ++ GR++ + + T G K+ RP
Sbjct: 351 DNG-PKGFAHVEFSTEAAAQKALNKSGQDMGGRRIYCDLANPRGTPASGPKRDRP 404
>gi|414869375|tpg|DAA47932.1| TPA: hypothetical protein ZEAMMB73_433523 [Zea mays]
Length = 694
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 13/83 (15%)
Query: 64 EVDSRSVFVGNQHFQSC-----------GTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQ 111
+ DSR+++V N HF + G V +V I T+ GQP G AYVEFL E+ +
Sbjct: 531 DADSRTLYVSNVHFAATKDSLSRHFNKFGAVLKVVIVTNAATGQPTGSAYVEFLHKESAE 590
Query: 112 EALHLNESELHGRQLKVTVKRTN 134
AL LN + R LKV V+R++
Sbjct: 591 RALSLNGTSFMTRILKV-VRRSS 612
>gi|440909353|gb|ELR59267.1| hypothetical protein M91_03724 [Bos grunniens mutus]
Length = 424
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 56/98 (57%), Gaps = 15/98 (15%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G S+ + E D+RS++VG
Sbjct: 271 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVG 330
Query: 74 N-----------QHFQSCGTVNRVTIRTDKF-GQPKGY 99
N HF CG+VNRVTI DKF G PKG+
Sbjct: 331 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGF 368
>gi|168017441|ref|XP_001761256.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687596|gb|EDQ73978.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 731
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 38/144 (26%)
Query: 20 DMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA-----NREEVDSRSVFVGN 74
+MK +L++++ + T LR A+V E+ + PAAG +++ ++E+++SRS+FV N
Sbjct: 446 EMKKKLRQIQLDMTKLRARQAEVTKEV--QNSPAAGLRTMSFESQPSQEDINSRSIFVTN 503
Query: 75 QHFQS-----------CGTVNRVTIRTD-KFGQPKG-------------------YAYVE 103
HF + CG +NRVT+ + G+PKG A+VE
Sbjct: 504 VHFAATQAALRAHFGGCGIINRVTLLAEPATGKPKGDLKGCPNLHDAKTSLHVDRSAFVE 563
Query: 104 FLQSEAVQEALHLNESELHGRQLK 127
F +AV+ AL L+ES L R +K
Sbjct: 564 FATKDAVEIALTLSESSLLSRNVK 587
>gi|440803738|gb|ELR24621.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 411
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 12/74 (16%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKFG-QPKGYAYVEFLQSEAVQEAL 114
+R+ FVGN HF+S GTV RV I D KG+ +VEF + + AL
Sbjct: 248 ARAAFVGNLPFSIRDEELRSHFESAGTVKRVRIVRDSATFMGKGFGFVEFENKDDLLGAL 307
Query: 115 HLNESELHGRQLKV 128
L+ESEL GRQ++V
Sbjct: 308 SLHESELQGRQIRV 321
>gi|308479279|ref|XP_003101849.1| hypothetical protein CRE_12119 [Caenorhabditis remanei]
gi|308262759|gb|EFP06712.1| hypothetical protein CRE_12119 [Caenorhabditis remanei]
Length = 169
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 17/110 (15%)
Query: 27 EMEEEATALRQMHAKVGNEMAS-KQDPAAGGSSLANREEVDSRSVFVGN----------- 74
E+E EA L+++ K+ +M + K P + ++ +D++S+FV N
Sbjct: 18 ELEAEAKVLKEIQTKMFEKMDTGKMTPP----TEEEQKAIDAKSIFVSNVEFGATIEELK 73
Query: 75 QHFQSCGTVNRVTIRTDKFGQP-KGYAYVEFLQSEAVQEALHLNESELHG 123
QHF+ CG + R TI DK + K YA++EF + +V+ A +N S G
Sbjct: 74 QHFKGCGEIVRTTIPKDKHTKKQKNYAFIEFDSASSVENAAVMNGSTFRG 123
>gi|356538573|ref|XP_003537777.1| PREDICTED: uncharacterized protein LOC100786132 [Glycine max]
Length = 748
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 75 QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HF SCG + RV+I D + G KG+AYV+F ++++ +AL L+E+EL G L V
Sbjct: 601 EHFGSCGDITRVSIPKDYESGAVKGFAYVDFGDADSMGKALELHETELGGYTLTV 655
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 12/83 (14%)
Query: 62 REEV-DSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEA 109
REE S+++FVGN F+ G V V TD G+ KG+ +VEF +EA
Sbjct: 472 REESGTSKTLFVGNLPFSVERADVEGFFKDAGEVVDVRFATDDTGKFKGFGHVEFATAEA 531
Query: 110 VQEALHLNESELHGRQLKVTVKR 132
Q AL LN +L R+L++ + R
Sbjct: 532 AQNALGLNGQQLFNRELRLDLAR 554
>gi|159476702|ref|XP_001696450.1| hypothetical protein CHLREDRAFT_51996 [Chlamydomonas reinhardtii]
gi|158282675|gb|EDP08427.1| predicted protein [Chlamydomonas reinhardtii]
Length = 91
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 12/80 (15%)
Query: 69 SVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHL 116
+VFVGN +HF+ CG + V I D G+ KGYA+V+F ++ Q+A
Sbjct: 2 TVFVGNLSWSASEDDIKKHFKDCGKIVSVRIGMDAATGRSKGYAHVDFESADQAQKATSK 61
Query: 117 NESELHGRQLKVTVKRTNVP 136
SEL GR +KV V + P
Sbjct: 62 AGSELGGRNIKVEVAQARAP 81
>gi|167392444|ref|XP_001740157.1| RNA-binding protein SGN1 [Entamoeba dispar SAW760]
gi|165895835|gb|EDR23424.1| RNA-binding protein SGN1, putative [Entamoeba dispar SAW760]
Length = 135
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 12/83 (14%)
Query: 63 EEVDSRSVFVGNQH-----------FQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAV 110
+E+DSRS+ V N F+ CG + V I + F Q P GYA +EF S A+
Sbjct: 34 KELDSRSIHVSNVEYSTTKDDLEDLFEKCGIILNVNIPINYFTQTPMGYANIEFKNSNAI 93
Query: 111 QEALHLNESELHGRQLKVTVKRT 133
++AL L+ + L+GR ++V+ K T
Sbjct: 94 EKALKLSGTYLNGRYIEVSKKIT 116
>gi|409079870|gb|EKM80231.1| hypothetical protein AGABI1DRAFT_73218 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 568
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 31/134 (23%)
Query: 45 EMASKQDPAAGGSSLANREEVDSR-----------------SVFVGN-----------QH 76
EM + PA ++ R+ VD S+FVG Q
Sbjct: 268 EMGDARKPAVKPTANGKRKAVDEEQPEAKKVKLDPATPETLSIFVGQLSWSVDNDRLAQE 327
Query: 77 FQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV 135
F CG V+ T++ D+ G+ +G+ YV F ++AV++AL +N E+ GR +KV + +
Sbjct: 328 FSECGEVSSATVQLDRNTGRSRGFGYVHFSTADAVEKALKMNGYEIDGRAIKVDL--STP 385
Query: 136 PGMKQHRPRRPNPF 149
P Q R RR F
Sbjct: 386 PNSNQIRERRAKVF 399
>gi|302817804|ref|XP_002990577.1| hypothetical protein SELMODRAFT_448081 [Selaginella moellendorffii]
gi|300141745|gb|EFJ08454.1| hypothetical protein SELMODRAFT_448081 [Selaginella moellendorffii]
Length = 602
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 75 QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HF+SCGT+ RV I TD+ G KG+AY+EF A +A L+ S+L G L V
Sbjct: 468 KHFKSCGTIERVKIPTDRETGNIKGFAYIEFSTDGAPAKAKELHGSDLDGCNLVV 522
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 30/126 (23%)
Query: 47 ASKQDPAAGGSSLAN---------------REEVDSRSVFVGN-----------QHFQSC 80
A+KQ PA+ L N +E +S+++FV N Q+F+
Sbjct: 309 AAKQAPASKKQKLENGKAAATKTDEVKTPAKEAGESKTLFVRNIPFSVTDEDLAQYFEDA 368
Query: 81 GTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV---KRTNVPG 137
G V V I G PKG+A+VEF A Q+AL+ + ++ GR++ + + T G
Sbjct: 369 GEVVGVRIAQGDNG-PKGFAHVEFSTEAAAQKALNKSGQDMGGRRIYCDLANPRGTPASG 427
Query: 138 MKQHRP 143
K+ RP
Sbjct: 428 PKRDRP 433
>gi|426198367|gb|EKV48293.1| hypothetical protein AGABI2DRAFT_142473 [Agaricus bisporus var.
bisporus H97]
Length = 559
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 31/134 (23%)
Query: 45 EMASKQDPAAGGSSLANREEVDSR-----------------SVFVGN-----------QH 76
EM + PA ++ R+ VD S+FVG Q
Sbjct: 268 EMGDARKPAVKPTANGKRKAVDEEQPEAKKVKLDPATPETLSIFVGQLSWSVDNDRLAQE 327
Query: 77 FQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV 135
F CG V+ T++ D+ G+ +G+ YV F ++AV++AL +N E+ GR +KV + +
Sbjct: 328 FSECGEVSSATVQLDRNTGRSRGFGYVHFSTADAVEKALKMNGYEIDGRAIKVDL--STP 385
Query: 136 PGMKQHRPRRPNPF 149
P Q R RR F
Sbjct: 386 PNSNQIRERRAKVF 399
>gi|356544468|ref|XP_003540672.1| PREDICTED: uncharacterized protein LOC100779929 [Glycine max]
Length = 744
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 75 QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HF SCG + RV+I D + G KG+AYV+F +++ +AL L+E+EL G L V
Sbjct: 596 EHFGSCGDITRVSIPKDYESGAVKGFAYVDFSDVDSMGKALELHETELGGYTLTV 650
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
S+++FVGN F+ G V V TD G+ KG+ +VEF + A Q+AL
Sbjct: 473 SKTLFVGNLPFSVERADVEDFFKDAGEVVDVRFATDDTGKFKGFGHVEFATAAAAQKALG 532
Query: 116 LNESELHGRQLKVTVKR 132
LN +L R+L++ + R
Sbjct: 533 LNGQQLFNRELRLDLAR 549
>gi|145528476|ref|XP_001450032.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417632|emb|CAK82635.1| unnamed protein product [Paramecium tetraurelia]
Length = 156
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 50/84 (59%), Gaps = 12/84 (14%)
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQ 111
+++D S+FV N ++F+ CG + +VT+R+DK Y+Y++F +V+
Sbjct: 35 KDIDLTSIFVRNLDENTTEDDLKEYFKDCGNIVKVTLRSDK-NTGTLYSYIQFQDQSSVE 93
Query: 112 EALHLNESELHGRQLKVTVKRTNV 135
+AL L+E + G+++ V KRTN+
Sbjct: 94 DALVLSEGIIRGKKILVFQKRTNL 117
>gi|345491945|ref|XP_001599982.2| PREDICTED: nucleolar protein 12-like [Nasonia vitripennis]
Length = 613
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 12/85 (14%)
Query: 58 SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFL 105
S N++ R+VF+GN +HF SCG + V I D K G +G YV F
Sbjct: 424 STKNKDHDQKRAVFLGNIPFDITEDEVRKHFDSCGKIESVRIVKDRKSGLSRGIGYVNFE 483
Query: 106 QSEAVQEALHLNESELHGRQLKVTV 130
++V AL LN + L R+++V +
Sbjct: 484 NQDSVTLALELNGTNLKNREIRVQI 508
>gi|145338423|ref|NP_566430.3| RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|332641706|gb|AEE75227.1| RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 638
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 13/84 (15%)
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAV 110
E+ SR++FV N +HF G V + I TD GQP G AY+EF + EA
Sbjct: 475 EDASSRTIFVANVHFGATKDSLSRHFNKFGEVLKAFIVTDPATGQPSGSAYIEFTRKEAA 534
Query: 111 QEALHLNESELHGRQLKVTVKRTN 134
+ AL L+ + R LK+ VK +N
Sbjct: 535 ENALSLDGTSFMSRILKI-VKGSN 557
>gi|21592882|gb|AAM64832.1| unknown [Arabidopsis thaliana]
Length = 320
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 13/84 (15%)
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAV 110
E+ SR++FV N +HF G V + I TD GQP G AY+EF + EA
Sbjct: 157 EDASSRTIFVANVHFGATKDSLSRHFNKFGEVLKAFIVTDPATGQPSGSAYIEFTRKEAA 216
Query: 111 QEALHLNESELHGRQLKVTVKRTN 134
+ AL L+ + R LK+ VK +N
Sbjct: 217 ENALSLDGTSFMSRILKI-VKGSN 239
>gi|449665135|ref|XP_002159315.2| PREDICTED: cleavage stimulation factor subunit 2-like [Hydra
magnipapillata]
Length = 413
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 13/78 (16%)
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQ 111
E +RSVFVGN F G V + D+ G+PKGY + E+ SE Q
Sbjct: 22 EKSARSVFVGNIPYEASDDQLKDIFSQAGPVLSFRLVYDRETGKPKGYGFCEYKDSETAQ 81
Query: 112 EAL-HLNESELHGRQLKV 128
A+ +LN +E+HGRQL+V
Sbjct: 82 SAMRNLNGTEIHGRQLRV 99
>gi|12321948|gb|AAG51005.1|AC069474_4 unknown protein; 13339-10119 [Arabidopsis thaliana]
Length = 674
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 13/84 (15%)
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAV 110
E+ SR++FV N +HF G V + I TD GQP G AY+EF + EA
Sbjct: 511 EDASSRTIFVANVHFGATKDSLSRHFNKFGEVLKAFIVTDPATGQPSGSAYIEFTRKEAA 570
Query: 111 QEALHLNESELHGRQLKVTVKRTN 134
+ AL L+ + R LK+ VK +N
Sbjct: 571 ENALSLDGTSFMSRILKI-VKGSN 593
>gi|11994405|dbj|BAB02407.1| unnamed protein product [Arabidopsis thaliana]
Length = 662
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 13/84 (15%)
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAV 110
E+ SR++FV N +HF G V + I TD GQP G AY+EF + EA
Sbjct: 499 EDASSRTIFVANVHFGATKDSLSRHFNKFGEVLKAFIVTDPATGQPSGSAYIEFTRKEAA 558
Query: 111 QEALHLNESELHGRQLKVTVKRTN 134
+ AL L+ + R LK+ VK +N
Sbjct: 559 ENALSLDGTSFMSRILKI-VKGSN 581
>gi|126644829|ref|XP_001388131.1| cutinase negative acting protein [Cryptosporidium parvum Iowa II]
gi|126117359|gb|EAZ51459.1| cutinase negative acting protein, putative [Cryptosporidium parvum
Iowa II]
Length = 711
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 16/81 (19%)
Query: 61 NREEVDSRSVFVGNQH-----------FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEA 109
N DSR V+ GN F+ CG++ RV++ +D KG A++ F Q E
Sbjct: 500 NTNNKDSREVYCGNLPYSCTEEEIRGLFEECGSIERVSVLSD-----KGCAFITFEQEEG 554
Query: 110 VQEALHLNESELHGRQLKVTV 130
+ A+ N++E GR L++ +
Sbjct: 555 AKSAIQWNQTEYKGRMLRINM 575
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 77 FQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
F CG V RV+I R G+ +G+A VEF E +Q AL L+ + ++GR++ + +
Sbjct: 612 FNGCGVVKRVSIPRYSDTGKMRGFAMVEFENDEQIQNALKLSGTSMNGREVTIEI 666
>gi|323510053|dbj|BAJ77920.1| cgd3_4150 [Cryptosporidium parvum]
Length = 747
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 16/81 (19%)
Query: 61 NREEVDSRSVFVGNQH-----------FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEA 109
N DSR V+ GN F+ CG++ RV++ +D KG A++ F Q E
Sbjct: 536 NTNNKDSREVYCGNLPYSCTEEEIRGLFEECGSIERVSVLSD-----KGCAFITFEQEEG 590
Query: 110 VQEALHLNESELHGRQLKVTV 130
+ A+ N++E GR L++ +
Sbjct: 591 AKSAIQWNQTEYKGRMLRINM 611
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 77 FQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
F CG V RV+I R G+ +G+A VEF E +Q AL L+ + ++GR++ + +
Sbjct: 648 FNGCGVVKRVSIPRYSDTGKMRGFAMVEFENDEQIQNALKLSGTSMNGREVTIEI 702
>gi|294882258|ref|XP_002769662.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239873262|gb|EER02380.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 214
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 12/75 (16%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEAL 114
S+SVF+GN Q F CG + RV+I TD + G+ KG+A+++F ++ ++A+
Sbjct: 95 SKSVFIGNLPFSMTKEWLEQIFSWCGDIERVSIPTDWESGKIKGFAFLDFADEDSAEKAV 154
Query: 115 HLNESELHGRQLKVT 129
N + GR L++
Sbjct: 155 GKNGEDCEGRDLRIN 169
>gi|365982827|ref|XP_003668247.1| hypothetical protein NDAI_0A08510 [Naumovozyma dairenensis CBS 421]
gi|343767013|emb|CCD23004.1| hypothetical protein NDAI_0A08510 [Naumovozyma dairenensis CBS 421]
Length = 474
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 23/85 (27%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
RS+FVGN HF+SCG + V IR K KG+AYV+F + ++V +AL
Sbjct: 299 RSIFVGNLDFEEAEESLWNHFKSCGEIEYVRIIRDAKTNMGKGFAYVQFKELQSVNKALL 358
Query: 116 LN-----------ESELHGRQLKVT 129
LN +S+ GR+L+VT
Sbjct: 359 LNDKVMMKSNVDKDSKKKGRKLRVT 383
>gi|260830184|ref|XP_002610041.1| hypothetical protein BRAFLDRAFT_129224 [Branchiostoma floridae]
gi|229295404|gb|EEN66051.1| hypothetical protein BRAFLDRAFT_129224 [Branchiostoma floridae]
Length = 542
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 37/72 (51%), Gaps = 12/72 (16%)
Query: 69 SVFVGN-----------QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALHL 116
S+FVGN +HF CG V V IR K G KG+ YV F S +V A+ L
Sbjct: 389 SIFVGNLPFDVEDDSVYEHFSQCGEVEGVRIIRDSKSGLGKGFGYVLFQDSASVGLAIRL 448
Query: 117 NESELHGRQLKV 128
NE GR+++V
Sbjct: 449 NEKTFSGRKIRV 460
>gi|67605110|ref|XP_666661.1| cutinase negative acting protein [Cryptosporidium hominis TU502]
gi|54657695|gb|EAL36429.1| cutinase negative acting protein [Cryptosporidium hominis]
Length = 475
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 16/81 (19%)
Query: 61 NREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEA 109
N DSR V+ GN F+ CG++ RV++ +D KG A++ F Q E
Sbjct: 264 NTNNKDSREVYCGNLPYSCTEEEIRGLFEECGSIERVSVLSD-----KGCAFITFEQEEG 318
Query: 110 VQEALHLNESELHGRQLKVTV 130
+ A+ N++E GR L++ +
Sbjct: 319 AKSAIQWNQTEYKGRMLRINM 339
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 77 FQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
F CG V RV+I R G+ +G+A VEF E +Q AL L+ + ++GR++ + +
Sbjct: 376 FNGCGVVKRVSIPRYSDTGKMRGFAMVEFENDEQIQNALKLSGTSMNGREVTIEI 430
>gi|449681386|ref|XP_002157256.2| PREDICTED: RNA-binding protein 34-like [Hydra magnipapillata]
Length = 360
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 60 ANREEVDSR-SVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQ 106
A+ ++VD + +FVGN HF+ CG + + I DK G KG+ YV F
Sbjct: 195 ADFQKVDQKLCLFVGNLPFSLSDEELRSHFKDCGWIEDIRIIRDKATGLGKGFGYVRFKN 254
Query: 107 SEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRP 143
S+ V L L+ES+ GR+L+V R ++ +P
Sbjct: 255 SDGVMLGLKLHESDFKGRKLRVFRSRNENQEKRKSKP 291
>gi|345309223|ref|XP_003428805.1| PREDICTED: polyadenylate-binding protein 2-like, partial
[Ornithorhynchus anatinus]
Length = 86
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 31/53 (58%), Gaps = 12/53 (22%)
Query: 58 SLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKG 98
S+ + E D+RS++VGN HF CG+VNRVTI DKF G PKG
Sbjct: 34 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG 86
>gi|403417997|emb|CCM04697.1| predicted protein [Fibroporia radiculosa]
Length = 480
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 10/72 (13%)
Query: 69 SVFVGN----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNE 118
+ F+GN + F + T+ V I D+ +PKG+ Y+EF ++++EAL+
Sbjct: 80 TAFIGNLAFDLTETELEDFFNAATIKSVKIIRDRDDKPKGFGYIEFTDLDSLKEALNKTN 139
Query: 119 SELHGRQLKVTV 130
S L GR ++V+V
Sbjct: 140 SNLAGRAIRVSV 151
>gi|291220976|ref|XP_002730499.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 458
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 58/131 (44%), Gaps = 34/131 (25%)
Query: 25 LKEMEEEATALRQMHAKVG-NEMASKQDPAAGGSSLANREEVDSRSVFVGN--------- 74
LK +++ +R H +V + ASK D RSVF+GN
Sbjct: 253 LKSLKKNGKVVRGHHIRVDVSSNASKHD--------------HQRSVFIGNLPYKIDEEI 298
Query: 75 --QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVK 131
QHF CG V V +R K G KG+ YV F +V+ AL N+ L GR KV +K
Sbjct: 299 VRQHFMQCGNVISVRLVRDGKTGIGKGFGYVLFKDISSVEFALKFNDKPLFGR--KVRIK 356
Query: 132 RT-----NVPG 137
R+ N PG
Sbjct: 357 RSFEKEKNKPG 367
>gi|428183384|gb|EKX52242.1| hypothetical protein GUITHDRAFT_102145 [Guillardia theta CCMP2712]
Length = 533
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Query: 75 QHFQSCGTVNRVTIR--TDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
QHF SC ++++IR TD+ G+P+G A++EF S A + AL L+ S + GR+++V
Sbjct: 375 QHFASCAPHDQMSIRVLTDRVTGKPRGIAFLEFKDSTAAEAALSLDHSIMRGRRIRV 431
>gi|270010528|gb|EFA06976.1| hypothetical protein TcasGA2_TC009936 [Tribolium castaneum]
Length = 469
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 12/71 (16%)
Query: 70 VFVGN-----------QHFQSCGTVNRVTIRTDKFG-QPKGYAYVEFLQSEAVQEALHLN 117
VFVGN +HF G + V I TDK +P+G+AYVE A Q+AL L+
Sbjct: 341 VFVGNLPFDATKEEIVEHFSKAGDIRHVRIPTDKHSNKPRGFAYVELENEVAYQKALSLH 400
Query: 118 ESELHGRQLKV 128
+++ GR++ V
Sbjct: 401 HTQIKGRRINV 411
>gi|405973847|gb|EKC38537.1| Serine/threonine-protein kinase PAK 6 [Crassostrea gigas]
Length = 1486
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
RS+FVGN HF+SCG + V IR K G KG YV F ++V A+
Sbjct: 376 RSIFVGNLPLDIKEEDVRSHFESCGKIRNVRVIRDSKSGVGKGICYVTFKSKDSVGLAMK 435
Query: 116 LNESELHGRQLKV 128
L +EL GR+ ++
Sbjct: 436 LKGTELSGRKARI 448
>gi|324507077|gb|ADY43007.1| RNA-binding protein 34 [Ascaris suum]
Length = 376
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 58 SLANREEVDS-RSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEF 104
S A++ DS ++VF+GN HF+ CG V+ V I D+ G KG A+V F
Sbjct: 218 SCASKRNYDSQKTVFIGNVPFGTQEDDLCAHFEKCGDVDFVRIVRDRATGIGKGIAFVAF 277
Query: 105 LQSEAVQEALHLNESELHGRQLKVT 129
++ + AL ++ S+ GRQL+VT
Sbjct: 278 KETAVIPIALKMDGSDFGGRQLRVT 302
>gi|401840528|gb|EJT43313.1| NOP12-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 460
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 12/63 (19%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALH 115
RS+FVGN +HF+SCG + V I R K KG+AYV+F E+V +AL
Sbjct: 280 RSIFVGNLDFEEIEESLWKHFESCGGIEYVRIVRDSKTNMGKGFAYVQFKDLESVNKALL 339
Query: 116 LNE 118
LNE
Sbjct: 340 LNE 342
>gi|170091988|ref|XP_001877216.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648709|gb|EDR12952.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 218
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 75 QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRT 133
Q F CG + T++ D+ G+ +G+ YV F +AV++AL +N E+ GR +K V R+
Sbjct: 17 QEFADCGEIESATVQMDRNTGKSRGFGYVHFTTPDAVEKALQMNGQEIDGRAIK--VDRS 74
Query: 134 NVPGMKQHRPRRPNPF 149
Q R +R F
Sbjct: 75 LPRDKSQVREKRAQAF 90
>gi|359476016|ref|XP_003631779.1| PREDICTED: uncharacterized protein LOC100854295 [Vitis vinifera]
Length = 664
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 20 DMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVD-SRSVFVGNQHFQ 78
D+K+R ++E E LR H + ++G + L EV + + + HF
Sbjct: 441 DLKVRFHQLEREMCKLRSKHTDLKRGGKPDLSSSSGEAILEQPFEVHFAATKEALSNHFA 500
Query: 79 SCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLK 127
CG V V I TD+ QPK A++ F E+V +AL L+ + R +K
Sbjct: 501 KCGLVVNVVILTDETIAQPKRSAFITFASVESVNKALALSGTSFFSRTVK 550
>gi|365758459|gb|EHN00299.1| Nop12p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 460
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 12/63 (19%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALH 115
RS+FVGN +HF+SCG + V I R K KG+AYV+F E+V +AL
Sbjct: 280 RSIFVGNLDFEEIEESLWKHFESCGGIEYVRIVRDSKTNMGKGFAYVQFKDLESVNKALL 339
Query: 116 LNE 118
LNE
Sbjct: 340 LNE 342
>gi|414876687|tpg|DAA53818.1| TPA: hypothetical protein ZEAMMB73_137007 [Zea mays]
Length = 112
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 125 QLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 184
+ KV +KRTNV GM+Q PR NP+ Y R P F PYGY + PRFR MRY Y
Sbjct: 51 KWKVALKRTNVLGMRQPPPRWYNPYHGYPYRSYGAPYF--PPYGYERAPRFRRLMRYIAY 108
Query: 185 Y 185
+
Sbjct: 109 H 109
>gi|443919574|gb|ELU39701.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 716
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 25/130 (19%)
Query: 34 ALRQMHAKVGNEMASKQDPAAGGSSLA--NREEVDSRSVFVGN-----------QHFQSC 80
A++ A N ++PA + A + E +S +VFVG Q FQ C
Sbjct: 74 AMKDAPAAGANGKRKAEEPAQTPAKKAKTDTEAGESNTVFVGRLSWNVDNDWLAQEFQGC 133
Query: 81 GTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL-HLNESELHGRQLKVTVKRTNVPGM 138
GTV ++ D+ G+ +G+AYVEF Q+A+ +N ++ GR++ V +
Sbjct: 134 GTVVAARVQMDRNSGKSRGFAYVEFSSPAEAQKAVEEMNGKQIDGREVNVDIS------- 186
Query: 139 KQHRPRRPNP 148
+PR+PNP
Sbjct: 187 ---QPRQPNP 193
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 51 DPAAGGSSLANREEVDSRSVFVGNQHFQSC-----------GTVNRVTIRTDK-FGQPKG 98
+P + E S ++FVGN + + G V V + TD+ G+PKG
Sbjct: 192 NPEKRAQVFGDSESQPSTTLFVGNLSWNTTEDGLWTAFGEFGDVTHVRLPTDQESGKPKG 251
Query: 99 YAYVEFLQSEAVQEALH-LNESELHGRQLKV 128
+ YVEF E +A + +L GR L++
Sbjct: 252 FGYVEFGDQEGATKAYEAMKGKDLDGRTLRL 282
>gi|341882516|gb|EGT38451.1| hypothetical protein CAEBREN_23840 [Caenorhabditis brenneri]
Length = 84
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 13/75 (17%)
Query: 69 SVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 115
SV+VGN Q F + G VN V I D+ G+P+G+A+VEF A Q A+
Sbjct: 6 SVYVGNAPFQTTEEQIGQFFSNVGQVNNVRIVYDRETGRPRGFAFVEFADEAAAQRAVQE 65
Query: 116 LNESELHGRQLKVTV 130
LN ++ +GRQL+V +
Sbjct: 66 LNGADFNGRQLRVNL 80
>gi|67469403|ref|XP_650680.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56467330|gb|EAL45294.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449708457|gb|EMD47913.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 135
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 12/83 (14%)
Query: 63 EEVDSRSVFVGNQH-----------FQSCGTVNRVTIRTDKFGQPK-GYAYVEFLQSEAV 110
+E++SRSV V N F+ CG V +V I ++F Q GYA +EF S AV
Sbjct: 34 KELNSRSVHVSNVEYTTTKEELEDLFERCGVVLKVNIPINQFTQTTMGYANIEFKNSNAV 93
Query: 111 QEALHLNESELHGRQLKVTVKRT 133
++A+ L + L+GR ++V+ K T
Sbjct: 94 EKAIKLTGTNLNGRYIEVSKKIT 116
>gi|357144688|ref|XP_003573380.1| PREDICTED: uncharacterized protein LOC100836665 isoform 2
[Brachypodium distachyon]
Length = 557
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 18/96 (18%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
S+++F+GN + F G V V + T + G PKGYA+VEF +E ++ L
Sbjct: 291 SKTLFMGNLPFSAEFGQVKEFFAEAGEVVDVRLATHEDGHPKGYAHVEFATAEDAKKGLE 350
Query: 116 LNESELHGR--QLKVTVKRTNVPGMKQHRPRRPNPF 149
LN EL GR +L + ++R P RPR F
Sbjct: 351 LNGQELMGRAVRLDLALERGATP-----RPRDGGSF 381
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 54 AGGSSLA--------NREEVDSRSVFVGNQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEF 104
+GGSSL+ +++E RS QHF CG + RV++ D + G+ KG AY++F
Sbjct: 385 SGGSSLSVFVKGFDSSQQEDKIRSSL--EQHFSKCGEITRVSVPMDYESGESKGIAYMDF 442
Query: 105 LQSEAVQEALHLNESELHGRQLKV 128
+ +AL L+ S+L G L V
Sbjct: 443 TDESSFSKALELSGSDLGGYNLYV 466
>gi|374106883|gb|AEY95792.1| FACR274Wp [Ashbya gossypii FDAG1]
Length = 426
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 15/77 (19%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALH 115
RSVFVGN +HF SCG + V I D K KG+AYV+F +V +AL
Sbjct: 259 RSVFVGNLDFEESEESLWKHFMSCGPIEYVRIVRDPKTNVGKGFAYVQFADLVSVNKALL 318
Query: 116 LNESEL---HGRQLKVT 129
LN+ ++ GR+L+VT
Sbjct: 319 LNDKKMAVGKGRKLRVT 335
>gi|21700195|dbj|BAC02896.1| tobacco nucleolin [Nicotiana tabacum]
Length = 620
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
S+++FVGN F+ G V V T + G KGY +VEF+ +EA +AL
Sbjct: 366 SKTLFVGNLSYSVEQADVENFFKDAGEVQEVRFSTHEDGSFKGYGHVEFVTAEAAHKALE 425
Query: 116 LNESELHGRQLKVTVKR 132
LN +L GR +++ + R
Sbjct: 426 LNGQDLLGRAVRLDLAR 442
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 75 QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQ--SEAVQEALHLNESELHGRQLKV 128
+HF SCG + + I TD G KG AY+EF S+A+ +AL L+ SE+ G L V
Sbjct: 489 EHFASCGKIFKTRIPTDPEGYIKGMAYIEFANGDSDALNKALELDGSEVGGYNLTV 544
>gi|365989592|ref|XP_003671626.1| hypothetical protein NDAI_0H02090 [Naumovozyma dairenensis CBS 421]
gi|343770399|emb|CCD26383.1| hypothetical protein NDAI_0H02090 [Naumovozyma dairenensis CBS 421]
Length = 128
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 14/93 (15%)
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGT-VNRVTIRTDKFGQPKGYAYVEFLQS 107
A + + DSRS+FV N HF+ G + R+T+ TD+ KG AY+EF
Sbjct: 26 AEQLDADSRSIFVNNISIDMTPEQIESHFKEFGNHIVRITLFTDR--HSKGCAYIEFDNV 83
Query: 108 EAVQEALHLNESELHGRQLKVTVKRTNVPGMKQ 140
E + AL+ N + +G + V KRTN+P K+
Sbjct: 84 EVRELALNSNGTPFNGSVIGVFRKRTNLPKFKR 116
>gi|45185960|ref|NP_983676.1| ACR274Wp [Ashbya gossypii ATCC 10895]
gi|74694749|sp|Q75BJ7.1|NOP12_ASHGO RecName: Full=Nucleolar protein 12
gi|44981750|gb|AAS51500.1| ACR274Wp [Ashbya gossypii ATCC 10895]
Length = 426
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 15/77 (19%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALH 115
RSVFVGN +HF SCG + V I D K KG+AYV+F +V +AL
Sbjct: 259 RSVFVGNLDFEESEESLWKHFMSCGPIEYVRIVRDPKTNVGKGFAYVQFADLVSVNKALL 318
Query: 116 LNESEL---HGRQLKVT 129
LN+ ++ GR+L+VT
Sbjct: 319 LNDKKMAVGKGRKLRVT 335
>gi|363749889|ref|XP_003645162.1| hypothetical protein Ecym_2633 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888795|gb|AET38345.1| Hypothetical protein Ecym_2633 [Eremothecium cymbalariae
DBVPG#7215]
Length = 430
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 15/89 (16%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
RSVFVGN +HF+SCG + V IR K KG+AYV+F+ + +V +AL
Sbjct: 263 RSVFVGNLDFEEIEENLWKHFESCGDIEYVRIIRDPKSNVGKGFAYVQFMDAGSVNKALL 322
Query: 116 LNESELH-GRQLKVTVKRTNVPGMKQHRP 143
L+E ++ G+ K+ V R MK+ +P
Sbjct: 323 LHEKKMTIGKCRKLRVSR--CKNMKKVQP 349
>gi|195390115|ref|XP_002053714.1| GJ23196 [Drosophila virilis]
gi|194151800|gb|EDW67234.1| GJ23196 [Drosophila virilis]
Length = 439
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 60/141 (42%), Gaps = 11/141 (7%)
Query: 13 NKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFV 72
N V LD I K + T ++ H +V + A G+ A+ + R+VFV
Sbjct: 211 NAYVVLDSAVIAEKALALNGTEFKENHLRVTPAAQVRGAVGAAGNDQASNDADVKRTVFV 270
Query: 73 GN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESEL 121
GN + F SCG ++ + D KG AYV F + +AV AL LNE+ L
Sbjct: 271 GNLKYTASEQKLREIFSSCGEIDYIRCLQDGDKGCKGVAYVCFQKPDAVGLALELNETLL 330
Query: 122 HGRQLKVTVKRTNVPGMKQHR 142
R + V G KQ R
Sbjct: 331 DDRPIHVERYSVKKLGAKQAR 351
>gi|430813955|emb|CCJ28747.1| unnamed protein product [Pneumocystis jirovecii]
Length = 364
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 14/85 (16%)
Query: 65 VDSRSVFVGN-----------QHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQE 112
V RS+F+GN +F CG + V I R +K KG+AYV+F E++ +
Sbjct: 218 VPKRSIFIGNLSFDAQEEQLWSYFAHCGEIEFVRIVRDNKTNLGKGFAYVQFKDRESIDQ 277
Query: 113 ALHLNESE-LHGRQLKVTVKRTNVP 136
AL L++ E L GR+L+V ++ N+P
Sbjct: 278 ALLLHDKEGLCGRKLRV-IRAKNIP 301
>gi|302310751|ref|XP_455433.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|223590101|sp|Q6CKV6.2|NOP12_KLULA RecName: Full=Nucleolar protein 12
gi|199425080|emb|CAG98141.2| KLLA0F07799p [Kluyveromyces lactis]
Length = 462
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 16/78 (20%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
RSVFVGN +HF+ CG + V IR K KG+AYV+F ++V +AL
Sbjct: 297 RSVFVGNLDFEEVEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDFQSVSKALL 356
Query: 116 LNESELH----GRQLKVT 129
L+E ++H R+L+++
Sbjct: 357 LHEKKIHEGKKARKLRIS 374
>gi|296412075|ref|XP_002835753.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629543|emb|CAZ79910.1| unnamed protein product [Tuber melanosporum]
Length = 453
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 21/112 (18%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
R VF+GN +HF +CG V V +R K KG+AYV+F +V EAL
Sbjct: 275 RCVFIGNLDFEAQEENLWRHFGTCGKVESVRVVRDAKTNVGKGFAYVQFEDPMSVDEALL 334
Query: 116 LNESEL-HGRQLKVTVKRTNVPGMKQHRPRRPNPFM----VYQSRGAIIPPF 162
L+ ++ + R+L+V+ +T +K+++ +P+P + +S+G IP
Sbjct: 335 LDSKKMANDRKLRVSRAKT----IKRNQTGKPDPPLSDKRSSRSKGVYIPKL 382
>gi|297737935|emb|CBI27136.3| unnamed protein product [Vitis vinifera]
Length = 691
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 18/117 (15%)
Query: 27 EMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN----------QH 76
EM + T +Q +K G + + + PA E S+++FVGN +H
Sbjct: 414 EMVDAETPAKQTDSKSGKK--APKTPA-----TPQVESTGSKTLFVGNLSFSVQKEDVEH 466
Query: 77 F-QSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKR 132
F + G V V +D G+ KG+ +VEF EA Q+AL +N +L GR +++ + R
Sbjct: 467 FFKDAGEVVDVRFSSDADGRFKGFGHVEFATPEAAQKALKMNGKDLLGRAVRLDLAR 523
>gi|359472731|ref|XP_002277195.2| PREDICTED: uncharacterized protein LOC100262769 [Vitis vinifera]
Length = 664
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 18/117 (15%)
Query: 27 EMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN----------QH 76
EM + T +Q +K G + + + PA E S+++FVGN +H
Sbjct: 368 EMVDAETPAKQTDSKSGKK--APKTPA-----TPQVESTGSKTLFVGNLSFSVQKEDVEH 420
Query: 77 F-QSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKR 132
F + G V V +D G+ KG+ +VEF EA Q+AL +N +L GR +++ + R
Sbjct: 421 FFKDAGEVVDVRFSSDADGRFKGFGHVEFATPEAAQKALKMNGKDLLGRAVRLDLAR 477
>gi|401623704|gb|EJS41793.1| nop12p [Saccharomyces arboricola H-6]
Length = 470
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 12/63 (19%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
RS+FVGN +HF+SCG + V IR K KG+AYV+F ++V +AL
Sbjct: 290 RSIFVGNLDFEEIEESLWKHFESCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 349
Query: 116 LNE 118
LNE
Sbjct: 350 LNE 352
>gi|326497679|dbj|BAK05929.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 15/108 (13%)
Query: 36 RQMHAKVGNE-MASKQDPAAGGSSLANREEV-DSR-SVFVGN-----------QHFQSCG 81
R+M K+ +AS+++P + ++ + +SR ++VGN +HF CG
Sbjct: 197 REMFVKLAAHVIASRRNPGGLSHTPPMKDHIFESRYKIYVGNLAWSVQPQHLREHFTKCG 256
Query: 82 TVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
TV + TD K G+ + Y ++ F +E ++ AL LN +E HGR + V
Sbjct: 257 TVVSTRLLTDRKGGRSRVYGFLSFSSAEELEAALQLNNTEFHGRDIIV 304
>gi|444727651|gb|ELW68131.1| RNA-binding protein 34 [Tupaia chinensis]
Length = 213
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 75 QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HF CG + V I D G KG+ YV F ++AV AL LN+SEL GR+L+V
Sbjct: 91 KHFLDCGKIMAVRIVRDPVTGVGKGFGYVLFENTDAVHLALKLNDSELMGRKLRV 145
>gi|50287177|ref|XP_446018.1| hypothetical protein [Candida glabrata CBS 138]
gi|74691041|sp|Q6FUS6.1|NOP12_CANGA RecName: Full=Nucleolar protein 12
gi|49525325|emb|CAG58942.1| unnamed protein product [Candida glabrata]
Length = 396
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 19/81 (23%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALH 115
RSVFVGN +HF +CG++ V I D K KG+AYV+F + ++V +AL
Sbjct: 228 RSVFVGNLDFEEDEESLWKHFGACGSIEYVRIVRDPKTNMGKGFAYVQFNELQSVSKALL 287
Query: 116 LNES-------ELHGRQLKVT 129
LNE L R+L+VT
Sbjct: 288 LNEKPMISQNEHLKKRKLRVT 308
>gi|357144686|ref|XP_003573379.1| PREDICTED: uncharacterized protein LOC100836665 isoform 1
[Brachypodium distachyon]
Length = 606
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 18/91 (19%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
S+++F+GN + F G V V + T + G PKGYA+VEF +E ++ L
Sbjct: 340 SKTLFMGNLPFSAEFGQVKEFFAEAGEVVDVRLATHEDGHPKGYAHVEFATAEDAKKGLE 399
Query: 116 LNESELHGR--QLKVTVKRTNVPGMKQHRPR 144
LN EL GR +L + ++R P RPR
Sbjct: 400 LNGQELMGRAVRLDLALERGATP-----RPR 425
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 54 AGGSSLA--------NREEVDSRSVFVGNQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEF 104
+GGSSL+ +++E RS QHF CG + RV++ D + G+ KG AY++F
Sbjct: 434 SGGSSLSVFVKGFDSSQQEDKIRSSL--EQHFSKCGEITRVSVPMDYESGESKGIAYMDF 491
Query: 105 LQSEAVQEALHLNESELHGRQLKVT 129
+ +AL L+ S+L G L V
Sbjct: 492 TDESSFSKALELSGSDLGGYNLYVA 516
>gi|407041600|gb|EKE40843.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 135
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 12/82 (14%)
Query: 64 EVDSRSVFVGNQH-----------FQSCGTVNRVTIRTDKFGQPK-GYAYVEFLQSEAVQ 111
E+DSRSV V N F+ CG V +V I ++ Q GYA +EF S AV+
Sbjct: 35 ELDSRSVHVSNVEYTTTKEELEDLFERCGVVLKVNIPINQLTQKTMGYANIEFKNSNAVE 94
Query: 112 EALHLNESELHGRQLKVTVKRT 133
+A+ L + L+GR ++V+ K T
Sbjct: 95 KAIKLTGTNLNGRYIEVSKKIT 116
>gi|403343651|gb|EJY71156.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 491
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 11/75 (14%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
S ++FVGN +HF CG + V + G+ KG+A+VEF E+ Q+AL
Sbjct: 343 STTLFVGNISFQTTQDSLERHFSKCGPIKAVRVAMGDDGRVKGFAHVEFESPESAQKALE 402
Query: 116 LNESELHGRQLKVTV 130
+N + GR+L++ +
Sbjct: 403 MNGAPCDGRELRLDL 417
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 13/78 (16%)
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQ 111
E+ D + +FVGN Q F GTV V + + G+PKG+A+VEF + Q
Sbjct: 235 EDDDKKELFVGNLSFHTTEDSLGQAFGEYGTVTNVKL-PQQDGRPKGFAFVEFATHKEAQ 293
Query: 112 EALHL-NESELHGRQLKV 128
AL N + GR L++
Sbjct: 294 AALDAYNGQDFEGRALRI 311
>gi|268569436|ref|XP_002640522.1| Hypothetical protein CBG18684 [Caenorhabditis briggsae]
Length = 84
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 13/75 (17%)
Query: 69 SVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 115
S++VGN F S GTV V I D+ G+P+G+A+VEF + ++ + A++
Sbjct: 7 SIYVGNAPYQTTEQEMGDFFSSVGTVTNVRIVLDRETGRPRGFAFVEFSEQQSAERAVNE 66
Query: 116 LNESELHGRQLKVTV 130
LN ++ +GRQL+V +
Sbjct: 67 LNGADFNGRQLRVNI 81
>gi|328766510|gb|EGF76564.1| hypothetical protein BATDEDRAFT_36238 [Batrachochytrium
dendrobatidis JAM81]
Length = 417
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
+S+F+GN F CG + V IR KG+ YV+F + +V AL
Sbjct: 280 KSIFIGNLLFDISEEALWSFFSDCGDITNVRVIRDRNTNVGKGFGYVQFAERSSVSLALK 339
Query: 116 LNESELHGRQLKVT 129
LN+++L GRQ++++
Sbjct: 340 LNDTDLQGRQVRIS 353
>gi|428170953|gb|EKX39874.1| hypothetical protein GUITHDRAFT_154318 [Guillardia theta CCMP2712]
Length = 270
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 22/114 (19%)
Query: 45 EMASKQDPAAGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF 93
E A K+D AAG D R VF+G + F+SCG + + + +
Sbjct: 12 EKAKKEDGAAG----------DKRRVFLGGLPFKATEKDIKKMFESCGAIENIELPMNAD 61
Query: 94 GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPN 147
+P G+ ++ F +++V +A+ ++ EL GR +KV + G +P PN
Sbjct: 62 SRPAGFGFLTFKDADSVAKAVAMDGQELMGRWVKVK-EADGTEGSAGKKPFTPN 114
>gi|224096554|ref|XP_002310655.1| predicted protein [Populus trichocarpa]
gi|222853558|gb|EEE91105.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 75 QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HF SCG + RV+I TD G KG AY+EF ++A+ +A LN S+L +L V
Sbjct: 419 EHFGSCGEIKRVSIPTDYDTGAIKGMAYLEFNDADALSKAFELNGSQLGEYRLTV 473
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 14/88 (15%)
Query: 63 EEVDSRSVFVGNQHFQ-----------SCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQ 111
E S+++FVGN FQ G V V D + +G+ +VEF +EA Q
Sbjct: 293 ENTGSKTLFVGNLSFQVERADVENFFKGAGEVADVRFALDADERFRGFGHVEFTTAEAAQ 352
Query: 112 EALHLNESELHGRQLKVTVKR---TNVP 136
+AL L+ + L GR +++ + R +N P
Sbjct: 353 KALKLHGNTLLGRDVRLDLAREKGSNTP 380
>gi|224083926|ref|XP_002307174.1| predicted protein [Populus trichocarpa]
gi|222856623|gb|EEE94170.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 75 QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESEL 121
+HF SCG ++R++I TD + G KG AY+EF ++A+ +A LN S+L
Sbjct: 515 EHFGSCGEISRISIPTDYETGAIKGMAYLEFNDADAMNKAFELNGSQL 562
Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Query: 63 EEVDSRSVFVGNQHFQ-----------SCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQ 111
E S+++FVGN FQ G V V D + KG+ +VEF +EA
Sbjct: 386 ENAGSKTLFVGNLSFQVERADVENFFKEAGEVADVRFALDADQRFKGFGHVEFTTTEAAL 445
Query: 112 EALHLNESELHGRQLKVTVKR 132
+AL+ N L GR +++ + R
Sbjct: 446 KALNFNGKSLLGRDVRLDLAR 466
>gi|302828556|ref|XP_002945845.1| hypothetical protein VOLCADRAFT_54847 [Volvox carteri f.
nagariensis]
gi|300268660|gb|EFJ52840.1| hypothetical protein VOLCADRAFT_54847 [Volvox carteri f.
nagariensis]
Length = 220
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 12/87 (13%)
Query: 56 GSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTD-KFGQPKGYAYVE 103
G++ A DS VFVGN +HF+ CG + V + D + G+ +G+A+VE
Sbjct: 49 GNAAATNGGTDSTRVFVGNLSWKATEDDVRKHFKDCGKIVNVRMGVDPETGRSRGFAHVE 108
Query: 104 FLQSEAVQEALHLNESELHGRQLKVTV 130
F + ++A+ +E+ GR +KV V
Sbjct: 109 FGDAAQAKKAVSKAGTEIDGRAIKVEV 135
>gi|384245524|gb|EIE19017.1| hypothetical protein COCSUDRAFT_67932 [Coccomyxa subellipsoidea
C-169]
Length = 596
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 64/146 (43%), Gaps = 17/146 (11%)
Query: 2 EGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLAN 61
+G D+ + + K +EL + ++RL E ++ AL A G A PAA SL
Sbjct: 377 QGKADDLAQMKRKMLELQE-QVRLLEAQQRTGALAGTMAAPGAIGAV--GPAAAPLSLP- 432
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAV 110
VD RSV V HF CG V VTI D G +G+A+VEF
Sbjct: 433 --PVDPRSVHVQGVSPLAVPEVIAAHFSGCGRVINVTIGRDMQGMSRGFAHVEFSNELEA 490
Query: 111 QEALHLNESELHGRQLKVTVKRTNVP 136
AL L+ S L + + VT K P
Sbjct: 491 HNALLLSGSILLQQPITVTPKMNRPP 516
>gi|169861389|ref|XP_001837329.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|116502051|gb|EAU84946.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 569
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 20/123 (16%)
Query: 40 AKVGNEMASKQDPAA--------GGSSLANREEVDSRSVFVGN-----------QHFQSC 80
AK G A+ D + G ++ A + S++VFVG F SC
Sbjct: 291 AKSGKRKAADDDEPSTKKVKLENGSAAPAGGDAQQSKAVFVGQLSWNVDNDWLASEFASC 350
Query: 81 GTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK 139
G + T++ D+ G+ +G+ YV F EA Q+AL LN E+ R +KV + P
Sbjct: 351 GEIESATVQMDRNTGKSRGFGYVHFTTVEAAQKALELNGKEIDNRPIKVDISTPRNPDAA 410
Query: 140 QHR 142
+ +
Sbjct: 411 RQK 413
>gi|159155220|gb|AAI54771.1| Rbm34 protein [Danio rerio]
Length = 410
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 46/97 (47%), Gaps = 22/97 (22%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH 115
RS+FVGN HFQ CG + V + D+ G KG+ YV F ++V AL
Sbjct: 251 RSIFVGNLPYDISELPLQNHFQECGNIEAVRLVRDRDSGMGKGFGYVLFESPDSVMLALK 310
Query: 116 LNESELHGRQLKVTVKRT--------NVPGMKQHRPR 144
LN S L +Q K+ VKR+ PG K PR
Sbjct: 311 LNGSTL--QQRKIRVKRSVKKEKEKKTPPGRKAEGPR 345
>gi|413938964|gb|AFW73515.1| hypothetical protein ZEAMMB73_612183 [Zea mays]
Length = 80
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Query: 1 MEGDDMDMIETEN---KQVELDDMKIRLKEMEEEATALRQMHAKVGNEM 46
M+G D+DM + + K ELD+MK RLKEMEEEA ALR M AKV EM
Sbjct: 19 MDGADVDMAASGDDAAKLQELDEMKRRLKEMEEEAAALRDMQAKVAKEM 67
>gi|256085557|ref|XP_002578985.1| hypothetical protein [Schistosoma mansoni]
gi|353233139|emb|CCD80494.1| hypothetical protein Smp_078240 [Schistosoma mansoni]
Length = 949
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 19/129 (14%)
Query: 8 MIETENKQVELDDMKIRLKEMEEEATALRQMH--------AKVGNEMASKQDPAAGGSSL 59
M ++ Q D ++ +K +E + R+ A V + SK +P + G+ +
Sbjct: 583 MESVKDVQSVKSDAEVPVKSIESKVPGSRKRKLPDHQNDSATVKSAKVSKPNPTSHGTFV 642
Query: 60 ANREEVDSRSVFVGN----------QH-FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSE 108
+ + +VFV N QH F+ CG V V + D G+ KG+AYVEF E
Sbjct: 643 PHDPSKNEFTVFVSNLDYSVSEEQIQHTFEKCGNVTSVRLVRDYAGRSKGFAYVEFENKE 702
Query: 109 AVQEALHLN 117
+V+ AL L+
Sbjct: 703 SVKTALTLD 711
>gi|308466761|ref|XP_003095632.1| hypothetical protein CRE_13667 [Caenorhabditis remanei]
gi|308244631|gb|EFO88583.1| hypothetical protein CRE_13667 [Caenorhabditis remanei]
Length = 160
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 22/95 (23%)
Query: 66 DSRSVFVGN-----------QHFQSCGTVNRVTI-----------RTDKFGQPKGYAYVE 103
+ VFVGN HF+ CG + R+TI + + +A++E
Sbjct: 19 TATCVFVGNVDFGATVAELEAHFKGCGEIVRITIPKDKITKKQKKYVKEVKEILFHAFIE 78
Query: 104 FLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 138
F + +V A+ +N S RQ+ VT+KRTN PGM
Sbjct: 79 FECAASVANAIVMNGSTFRERQIVVTLKRTNKPGM 113
>gi|219114504|ref|XP_002176422.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402668|gb|EEC42658.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 104
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 15/84 (17%)
Query: 69 SVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHL 116
+VF+GN Q F CG +++V TD+ G KG+ ++EF+ +E+ +A+ +
Sbjct: 21 TVFIGNLAWDVDEDTIKQSFADCGEISQVRFATDRETGDFKGFGHIEFVATESTDKAIEM 80
Query: 117 NESELHGRQLKVTV---KRTNVPG 137
+E+ GR ++V KR + PG
Sbjct: 81 AGTEILGRPVRVDFANDKRNSAPG 104
>gi|1279563|emb|CAA61298.1| nuM1 [Medicago sativa]
Length = 635
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 75 QHFQ-SCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HF +CG RV+I D + G KG+AY++F S++ +AL L+ESEL G QL V
Sbjct: 497 EHFGGTCGEPTRVSIPKDYESGYSKGFAYMDFKDSDSFSKALELHESELDGYQLSV 552
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQ 111
E S+++FVGN FQ C V V + +D G KG+ +VEF +EA Q
Sbjct: 371 ETSGSKTLFVGNLSFDVKRSDIENFFQGCVEVVDVRLASDGDGVFKGFGHVEFATAEAAQ 430
Query: 112 EALHLNESELHGRQLKVTVKR 132
AL +N EL R L++ + R
Sbjct: 431 SALEMNGQELLHRALRLDLAR 451
>gi|145492248|ref|XP_001432122.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399231|emb|CAK64725.1| unnamed protein product [Paramecium tetraurelia]
Length = 559
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 11/74 (14%)
Query: 66 DSRSVFVGNQHF-----------QSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL 114
+S + F+GN F + CG + V I D G+ +G+ YVEF +E+ Q+ L
Sbjct: 403 ESTTCFIGNMSFYATEDSLYPVFEDCGKIKEVRIAKDAEGKSRGFGYVEFFDNESAQKGL 462
Query: 115 HLNESELHGRQLKV 128
+++ GR ++V
Sbjct: 463 AKTGTDVEGRAIRV 476
>gi|219130905|ref|XP_002185593.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402933|gb|EEC42891.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 222
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 13/87 (14%)
Query: 55 GGSSLANREEVDSRS-VFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYV 102
GG R VD+ + +FVGN HF+ CG + R ++ GQ KG+ V
Sbjct: 129 GGGRGIGRLNVDAETQLFVGNLAQSTTWRELKDHFRQCGDIQRAEVKNGPAGQSKGFGTV 188
Query: 103 EFLQSEAVQEAL-HLNESELHGRQLKV 128
+FL+ ++A+ LN SEL G ++V
Sbjct: 189 QFLKKSDAKDAITQLNGSELQGNVIEV 215
>gi|345566286|gb|EGX49229.1| hypothetical protein AOL_s00078g262 [Arthrobotrys oligospora ATCC
24927]
Length = 574
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 16/92 (17%)
Query: 58 SLANREEVDSR-SVFVGN-----------QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEF 104
S+A+ + DSR VFVGN +HF +CG V V +R K KG+AYV+F
Sbjct: 380 SVAHPAKNDSRKCVFVGNLDFEAAEESLWKHFSTCGKVENVRLVRDAKTNVGKGFAYVQF 439
Query: 105 LQSEAVQEALHLNESELH---GRQLKVTVKRT 133
V++AL LNE + GR+ K+ V R
Sbjct: 440 ADDVDVEKALLLNEKPMEVEKGRKRKLRVTRA 471
>gi|443694236|gb|ELT95429.1| hypothetical protein CAPTEDRAFT_160825 [Capitella teleta]
Length = 548
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 46 MASKQD-PAAGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK- 92
MAS Q P +S + EE RSVFVGN + FQ G V + D+
Sbjct: 1 MASIQKTPPPSNTSPSASEERAQRSVFVGNIPYEASEEQLKEVFQQAGPVISFRLVYDRE 60
Query: 93 FGQPKGYAYVEFLQSEAVQEAL-HLNESELHGRQLKVTV 130
G+PKGY + E+ E Q A+ +LN + +GR L+V V
Sbjct: 61 TGKPKGYGFCEYQDVETAQSAMRNLNNYDYNGRPLRVGV 99
>gi|452823975|gb|EME30981.1| poly(A) binding protein isoform 2 [Galdieria sulphuraria]
Length = 223
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 15/102 (14%)
Query: 56 GSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEF 104
GS + +R VFVGN QH S G + I T+ G+ G A VEF
Sbjct: 32 GSPSVAEDSTRNRRVFVGNLAYRTTLDDLIQHLGSVGKIATSQILTNNLGRSVGGAIVEF 91
Query: 105 LQSEAVQEALH-LNESELHGRQLKVTVKRTNVPGMKQHRPRR 145
EA + A+ LN+SEL GR++ + R + H PRR
Sbjct: 92 DSEEAAKRAIETLNDSELDGRKI---IIREDREDFSLHDPRR 130
>gi|403415768|emb|CCM02468.1| predicted protein [Fibroporia radiculosa]
Length = 1020
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 77 FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRT 133
F++ GTV V + D G+PKG+A++EF Q + AL N EL R++ VT+ T
Sbjct: 804 FRTYGTVKEVRMALDPNGRPKGFAFIEFEQEQDASAALSANNYELKNRRIAVTLADT 860
>gi|452823974|gb|EME30980.1| poly(A) binding protein isoform 1 [Galdieria sulphuraria]
Length = 222
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
+R VFVGN QH S G + I T+ G+ G A VEF EA + A+
Sbjct: 42 NRRVFVGNLAYRTTLDDLIQHLGSVGKIATSQILTNNLGRSVGGAIVEFDSEEAAKRAIE 101
Query: 116 -LNESELHGRQLKVTVKRTNVPGMKQHRPRR 145
LN+SEL GR++ + R + H PRR
Sbjct: 102 TLNDSELDGRKI---IIREDREDFSLHDPRR 129
>gi|50539824|ref|NP_001002382.1| RNA-binding protein 34 [Danio rerio]
gi|49900339|gb|AAH75875.1| RNA binding motif protein 34 [Danio rerio]
Length = 411
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH 115
RS+FVGN HFQ CG + V + D+ G KG+ YV F ++V AL
Sbjct: 252 RSIFVGNLPYDISELPLQNHFQECGNIEAVRLVRDRDSGMGKGFGYVLFESPDSVMLALK 311
Query: 116 LNESELHGRQLKV 128
LN S L R+++V
Sbjct: 312 LNGSTLQQRKIRV 324
>gi|326503120|dbj|BAJ99185.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 724
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 75 QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESEL 121
+HF SCG + RV+I D + G KG AYVEF ++ +AL LN S +
Sbjct: 585 EHFSSCGAIGRVSIPKDYETGTSKGIAYVEFTDGNSLPKALELNGSNI 632
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 11/77 (14%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
S+++FVGN Q F G V+ + T G KG+A+VEF +EA Q+A
Sbjct: 464 SKTLFVGNLSYNVENDEVKQFFGEAGEVSDIRFATADDGSFKGFAHVEFATTEAAQKAYE 523
Query: 116 LNESELHGRQLKVTVKR 132
LN +L GR +++ R
Sbjct: 524 LNGHDLSGRPVRLDFAR 540
>gi|413921101|gb|AFW61033.1| putative nucleolin-like family protein [Zea mays]
Length = 659
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 75 QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHG 123
QHF CG + RV+I TD + G KG AY++F ++V +AL L+ S++ G
Sbjct: 516 QHFSDCGEMTRVSIPTDHESGAIKGMAYIDFKDQDSVSKALELSGSDIGG 565
>gi|413921103|gb|AFW61035.1| putative nucleolin-like family protein [Zea mays]
Length = 654
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 75 QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHG 123
QHF CG + RV+I TD + G KG AY++F ++V +AL L+ S++ G
Sbjct: 511 QHFSDCGEMTRVSIPTDHESGAIKGMAYIDFKDQDSVSKALELSGSDIGG 560
>gi|224047848|ref|XP_002191823.1| PREDICTED: RNA-binding protein 34 [Taeniopygia guttata]
Length = 428
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 17/118 (14%)
Query: 23 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-------- 74
+ KE + AL++ ++ + + D A+ S N+ RSVFVGN
Sbjct: 236 VVFKEECDAQNALKENGTEIASGFHIRVDTASKTSLHDNK-----RSVFVGNLSYDIRDD 290
Query: 75 ---QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HFQ CG + V + D+ G KG+ YV F ++AV AL LN S L GR+++V
Sbjct: 291 AVREHFQVCGDIVGVRVVRDRRTGLGKGFGYVLFENTDAVHLALKLNNSVLMGRKIRV 348
>gi|255713116|ref|XP_002552840.1| KLTH0D02640p [Lachancea thermotolerans]
gi|238934220|emb|CAR22402.1| KLTH0D02640p [Lachancea thermotolerans CBS 6340]
Length = 462
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 18/92 (19%)
Query: 66 DSRSVFVGN-----------QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEA 113
+ RSVFVGN +HF+ G + V +R K KG+AYV+F + + +A
Sbjct: 295 NKRSVFVGNLDFEEAEENLWKHFEKSGEIEYVRVVRDSKTNMGKGFAYVQFRDFQDINKA 354
Query: 114 LHLNESELH--GRQLKVTVKRTNVPGMKQHRP 143
L LN+ +L+ GR+L+V T MK+ +P
Sbjct: 355 LLLNDQKLNGTGRKLRV----TRCKNMKKTQP 382
>gi|388627|gb|AAA28862.1| putative, partial [Drosophila melanogaster]
Length = 48
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 12/48 (25%)
Query: 69 SVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEF 104
SV+VGN HF CGT+NRVTI +K G PKG+AY+EF
Sbjct: 1 SVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEF 48
>gi|392569148|gb|EIW62322.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 556
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 12/78 (15%)
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAV 110
EE ++S+FVG Q F CG V ++ D+ G+ +G+ YVEF +EAV
Sbjct: 292 EEEGTKSIFVGRLSWNVDNDWLAQEFAECGEVISARVQMDRNTGKSRGFGYVEFATTEAV 351
Query: 111 QEALHLNESELHGRQLKV 128
+ AL LN E+ GR + +
Sbjct: 352 EAALLLNGKEIDGRPVNI 369
>gi|302845893|ref|XP_002954484.1| hypothetical protein VOLCADRAFT_106420 [Volvox carteri f.
nagariensis]
gi|300260156|gb|EFJ44377.1| hypothetical protein VOLCADRAFT_106420 [Volvox carteri f.
nagariensis]
Length = 393
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 75 QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNES-ELHGRQLKVTVKRT 133
+ F+ G + RV I TDK G+P+GYA++EF ++EA + ++ GR++ V V+R
Sbjct: 169 REFEEFGPIKRVRIVTDKQGKPRGYAFIEFEHKADMKEAYKAADGKKIEGRRVLVDVERG 228
Query: 134 NVPGMKQHRPRR 145
++ +PRR
Sbjct: 229 RT--VENWKPRR 238
>gi|403218189|emb|CCK72680.1| hypothetical protein KNAG_0L00570 [Kazachstania naganishii CBS
8797]
Length = 431
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 12/63 (19%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALH 115
RSVF+GN +HF +CG + V I R K KG+AYV+F Q E V +AL
Sbjct: 254 RSVFIGNLDFEEDEETLWKHFATCGPIEYVRIVRDSKTNVGKGFAYVQFKQLETVSKALL 313
Query: 116 LNE 118
LN+
Sbjct: 314 LND 316
>gi|156839965|ref|XP_001643668.1| hypothetical protein Kpol_1040p23 [Vanderwaltozyma polyspora DSM
70294]
gi|156114288|gb|EDO15810.1| hypothetical protein Kpol_1040p23 [Vanderwaltozyma polyspora DSM
70294]
Length = 467
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 16/80 (20%)
Query: 66 DSRSVFVGN-----------QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEA 113
+ RS+FVGN HF+SCG + V IR K KG+AY++F ++V +A
Sbjct: 293 NKRSIFVGNMDFEQDEETLWSHFESCGEIEYVRIIRDSKTNLGKGFAYIQFKDLQSVNKA 352
Query: 114 LHLNESELHG----RQLKVT 129
L LN+ + R+L+V+
Sbjct: 353 LLLNDKKFDNTKTTRKLRVS 372
>gi|390363636|ref|XP_781943.2| PREDICTED: uncharacterized protein LOC576551 [Strongylocentrotus
purpuratus]
Length = 394
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 17/114 (14%)
Query: 27 EMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN-----------Q 75
E E+ A A + K+ N+ + D A N++ RS+FVGN
Sbjct: 218 EEEQCARAALASNGKIVNKHHMRVDIAGN-----NKKHDMKRSLFVGNLAFNIDDEAVRN 272
Query: 76 HFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
HF+ GTV V + DK G KG+ YV F S +VQ AL ++ ++L+GR L+V
Sbjct: 273 HFEEFGTVEGVRLIRDKATGVGKGFGYVLFEDSSSVQFALKMDGTKLNGRPLRV 326
>gi|339248325|ref|XP_003375796.1| RNA-binding protein squid [Trichinella spiralis]
gi|316970795|gb|EFV54670.1| RNA-binding protein squid [Trichinella spiralis]
Length = 329
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 12/79 (15%)
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 109
RE+ + R +FVG HF G V V ++ D + G+ +G+A+VEF +EA
Sbjct: 52 REKNEERKIFVGGISWDTNENDLTNHFNQFGDVVHVQVKYDHYTGRSRGFAFVEFATAEA 111
Query: 110 VQEALHLNESELHGRQLKV 128
++AL ++EL G++ +V
Sbjct: 112 CKKALAKKDAELKGKKCEV 130
>gi|398016175|ref|XP_003861276.1| hypothetical protein, conserved [Leishmania donovani]
gi|322499501|emb|CBZ34574.1| hypothetical protein, conserved [Leishmania donovani]
Length = 243
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 19/92 (20%)
Query: 63 EEVDSRSVFVGN-----------------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEF 104
++ DSRS+F+GN Q F CG + T+ D+ G+PKG AY+EF
Sbjct: 128 KDTDSRSIFIGNLPRGTDGTPATTPEELVQFFADCGNILNCTVLKDRATGEPKGTAYIEF 187
Query: 105 LQSEAVQEALHL-NESELHGRQLKVTVKRTNV 135
A+ +A+ N + G + V V + +
Sbjct: 188 ADYTAMGKAIDTKNNANFKGSTIIVCVSTSPI 219
>gi|339898436|ref|XP_003392587.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|321399568|emb|CBZ08755.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 245
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 19/92 (20%)
Query: 63 EEVDSRSVFVGN-----------------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEF 104
++ DSRS+F+GN Q F CG + T+ D+ G+PKG AY+EF
Sbjct: 130 KDTDSRSIFIGNLPRGTDGTPATTPEELVQFFADCGNILNCTVLKDRATGEPKGTAYIEF 189
Query: 105 LQSEAVQEALHL-NESELHGRQLKVTVKRTNV 135
A+ +A+ N + G + V V + +
Sbjct: 190 ADYTAMGKAIDTKNNANFKGSTIIVCVSTSPI 221
>gi|268569444|ref|XP_002640524.1| Hypothetical protein CBG18686 [Caenorhabditis briggsae]
Length = 84
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 13/74 (17%)
Query: 69 SVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL-H 115
SV+VGN Q F S G VN V I D+ G+P+G+A+VEF Q A+
Sbjct: 7 SVYVGNVPYQVSEEEIGQWFSSVGVVNNVRIVFDRETGRPRGFAFVEFTDEAGAQRAVEQ 66
Query: 116 LNESELHGRQLKVT 129
LN + +GR L+V
Sbjct: 67 LNGASFNGRNLRVN 80
>gi|398407175|ref|XP_003855053.1| hypothetical protein MYCGRDRAFT_108180 [Zymoseptoria tritici
IPO323]
gi|339474937|gb|EGP90029.1| hypothetical protein MYCGRDRAFT_108180 [Zymoseptoria tritici
IPO323]
Length = 566
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 75 QHFQSCGTVNRVTIRTDKFG-QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRT 133
+ F S +V V I DK +PKG+ YVEF E +++AL +ES GR +K++V
Sbjct: 118 EEFLSDCSVTTVRIMEDKVDRKPKGFGYVEFGSPEGLRQALTKSESSFMGRNIKISV--A 175
Query: 134 NVPGMKQHRPRRPNPFMVYQSRGAI 158
+ P K RP + F + RG +
Sbjct: 176 DPP--KNDRPEQTRDFSDWSRRGPL 198
>gi|118372171|ref|XP_001019282.1| nucleolar phosphoprotein [Tetrahymena thermophila]
gi|89301049|gb|EAR99037.1| nucleolar phosphoprotein [Tetrahymena thermophila SB210]
Length = 320
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 72 VGNQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 126
+GN ++CG+V RV + ++ G KG A+V F E +A+ L++SE GRQ+
Sbjct: 158 IGNYLNENCGSVTRVNLLKNEQGCSKGVAFVSFETEEGCNKAVELSDSEFMGRQI 212
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 72 VGNQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVK 131
+ N Q CG V++V + + G+ KG A+V F E +AL +N SE GR L +
Sbjct: 48 ISNYFDQKCGQVSKVKLLMNSQGRSKGIAFVSFETEEGYNKALEMNNSEFMGRYLIIEKT 107
Query: 132 RTNVPGMKQ 140
++ + Q
Sbjct: 108 KSKAERLTQ 116
Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 12/76 (15%)
Query: 66 DSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL 114
DS+++FVGN + F SCG V I + G+ +G+ +VEF + V+ AL
Sbjct: 232 DSKTIFVGNLSFVTNKETLKKFFASCGKVVNARI-AEAEGKSRGFGHVEFEERSGVENAL 290
Query: 115 HLNESELHGRQLKVTV 130
+ ++ GR ++V V
Sbjct: 291 KMAGEQIDGRPIRVDV 306
>gi|67983365|ref|XP_669046.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56482726|emb|CAI00762.1| hypothetical protein PB300015.00.0 [Plasmodium berghei]
Length = 61
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 77 FQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
F CG +N TI +K G KGYAY+EF +V+ A+ L++S RQ+KV
Sbjct: 6 FSQCGIINTFTILVNKNTGHSKGYAYIEFADPSSVRTAISLSKSFFKKRQIKV 58
>gi|213402043|ref|XP_002171794.1| nucleolar protein [Schizosaccharomyces japonicus yFS275]
gi|211999841|gb|EEB05501.1| nucleolar protein [Schizosaccharomyces japonicus yFS275]
Length = 437
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 13/79 (16%)
Query: 64 EVDSRSVFVGNQHFQS-----------CGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQ 111
+V+ R VFVGN F++ CG V V IR K KG+AYV+F +E+V
Sbjct: 280 QVNKRCVFVGNLAFEAEEEPLWCYFEPCGPVEYVRIIRDPKTNLGKGFAYVQFQSAESVD 339
Query: 112 EALHLNESEL-HGRQLKVT 129
+AL LN ++ GR L+V+
Sbjct: 340 KALLLNGKKMPEGRTLRVS 358
>gi|357144691|ref|XP_003573381.1| PREDICTED: uncharacterized protein LOC100836665 isoform 3
[Brachypodium distachyon]
Length = 580
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 54 AGGSSLA--------NREEVDSRSVFVGNQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEF 104
+GGSSL+ +++E RS QHF CG + RV++ D + G+ KG AY++F
Sbjct: 408 SGGSSLSVFVKGFDSSQQEDKIRSSL--EQHFSKCGEITRVSVPMDYESGESKGIAYMDF 465
Query: 105 LQSEAVQEALHLNESELHGRQLKVT 129
+ +AL L+ S+L G L V
Sbjct: 466 TDESSFSKALELSGSDLGGYNLYVA 490
Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 19/97 (19%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL- 114
S+++F+GN + F G V V + T + G PKGYA+VEF +E ++ +
Sbjct: 313 SKTLFMGNLPFSAEFGQVKEFFAEAGEVVDVRLATHEDGHPKGYAHVEFATAEDAKKVIV 372
Query: 115 HLNESELHGR--QLKVTVKRTNVPGMKQHRPRRPNPF 149
LN EL GR +L + ++R P RPR F
Sbjct: 373 SLNGQELMGRAVRLDLALERGATP-----RPRDGGSF 404
>gi|119482153|ref|XP_001261105.1| translation initiation factor 4B [Neosartorya fischeri NRRL 181]
gi|119409259|gb|EAW19208.1| translation initiation factor 4B [Neosartorya fischeri NRRL 181]
Length = 512
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 74 NQHFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
N F CG N V I DK + PKG+ YVEF + +++AL L+ + L GR ++V++
Sbjct: 103 NDLFAGCGVTN-VRIVEDKLTRTPKGFGYVEFETVDGLKKALDLSGTTLQGRAIRVSI 159
>gi|167531199|ref|XP_001748165.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773285|gb|EDQ86926.1| predicted protein [Monosiga brevicollis MX1]
Length = 454
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 13/74 (17%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALH 115
RS+FVGN F SCGTV V I R K+ KG+AYV F +E+V AL
Sbjct: 222 RSIFVGNLPFDASEEELHGAFDSCGTVEGVRIVRDKKYAIGKGFAYVLFELAESVGLAL- 280
Query: 116 LNESELHGRQLKVT 129
+ E ++ GR L+V+
Sbjct: 281 MKECQVRGRTLRVS 294
>gi|341884731|gb|EGT40666.1| CBN-PAB-2 protein [Caenorhabditis brenneri]
Length = 707
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 77 FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL-HLNESELHGRQLKVTVKRT 133
F G +N + TD G+PKG+ +V + EA +A+ LNES L G +LK++V R
Sbjct: 263 FSKYGEINSAVVMTDAEGKPKGFGFVAYADPEAASKAVDDLNESILEGTELKLSVCRA 320
>gi|168039508|ref|XP_001772239.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676409|gb|EDQ62892.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 507
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 79 SCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH-LNESELHGRQLKVT 129
SCG V V + DK GQ KGYA+V FL E ++A+ LN+SE+ GR+L+ +
Sbjct: 147 SCGDVYEVRLLKDKDTGQNKGYAFVTFLNEECAEKAIETLNDSEVKGRKLRFS 199
>gi|168041522|ref|XP_001773240.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675435|gb|EDQ61930.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 799
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 77 FQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
F CGTV V I TD+ GQ KG+AYVEF + V +A L+ S+ +GR L V
Sbjct: 449 FSDCGTVLNVRIPTDRESGQIKGFAYVEFGSKDEVNKAFELDGSDFNGRSLVV 501
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 14/95 (14%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
S+++FV N + F GTV V I D G+ +G+ +VEF E Q AL
Sbjct: 319 SKTIFVKNLAWKVTQDTLYEFFADAGTVADVRISQDDDGRSRGFGHVEFETPEGAQNALL 378
Query: 116 LNESELHGRQLKVTVKRTN---VPGMKQHRPRRPN 147
+ + GR++ + R PG + + PN
Sbjct: 379 KSGQNVEGREIWCDLARERGAATPGGGKDWSQTPN 413
>gi|393227010|gb|EJD34711.1| hypothetical protein AURDEDRAFT_109252 [Auricularia delicata
TFB-10046 SS5]
Length = 1014
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Query: 54 AGGSSLANREEVDSRSVFVGNQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEA 113
AG S REE+ + FQ GT+ + I D G KG+A+VEF + +
Sbjct: 758 AGLSRFTKREELQA--------LFQQFGTIKDIRISLDDNGHCKGFAFVEFAEPRSAHSG 809
Query: 114 LHLNESELHGRQLKVTVKRTNVPGMKQH 141
L N EL R++ VT+ V +H
Sbjct: 810 LSANNFELKSRRIAVTLADPRVKAKHKH 837
>gi|307211749|gb|EFN87744.1| RNA-binding protein 34 [Harpegnathos saltator]
Length = 555
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 12/77 (15%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
+S+F+GN ++F CG + V IR K GQ +G+ YV F +AV AL
Sbjct: 371 KSIFIGNLKFGMNTNDIWENFSKCGEIESVRLIRDKKTGQTRGFGYVNFKSEDAVTLALK 430
Query: 116 LNESELHGRQLKVTVKR 132
L+ E++ R ++V R
Sbjct: 431 LDGVEINNRPVRVRTCR 447
>gi|157870291|ref|XP_001683696.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68126762|emb|CAJ05230.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 221
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 19/90 (21%)
Query: 63 EEVDSRSVFVGN-----------------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEF 104
++ DSRS+F+GN Q F CG + T+ D+ G+PKG AY+EF
Sbjct: 122 KDTDSRSIFIGNLPRGTDGTPTTTPEELVQFFADCGNILNCTVLKDRATGEPKGTAYIEF 181
Query: 105 LQSEAVQEALHL-NESELHGRQLKVTVKRT 133
A+ +A+ N + G + V V +
Sbjct: 182 ADYTAMGKAIDTKNNANFKGSTIIVCVSTS 211
>gi|341883256|gb|EGT39191.1| hypothetical protein CAEBREN_30504 [Caenorhabditis brenneri]
Length = 169
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 24/118 (20%)
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEA 109
++E+DSRS+FV N + + CG++ + I+ D K G K + +VEF+ ++
Sbjct: 46 QKEIDSRSIFVSNLDPKMTEDLIRRCLECCGSIKSIHIQRDSKTGVSKRFCFVEFVMEDS 105
Query: 110 VQEALHLNESELHGRQLKVTVKRT-----------NVPGMKQHRPRRPNPFMVYQSRG 156
V AL LN + G ++ K++ N+P +H P R + ++ S+
Sbjct: 106 VDIALPLNGTRFKGNLFYISRKKSSNQTKPEENKENLPSQFRH-PIRSSKYVYVSSKS 162
>gi|396476405|ref|XP_003840015.1| hypothetical protein LEMA_P108010.1 [Leptosphaeria maculans JN3]
gi|312216586|emb|CBX96536.1| hypothetical protein LEMA_P108010.1 [Leptosphaeria maculans JN3]
Length = 594
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 74 NQHFQSCGTVNRVTIRTDKFG-QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
N F C N V I DK +PKG+ YVEF E +++AL L+ S+ GR ++V+V
Sbjct: 154 NDFFSGCEVTN-VRIVEDKLDRKPKGFGYVEFGSVEGLKKALDLSGSQFQGRNVRVSV 210
>gi|120537458|gb|AAI30002.1| LOC390748 protein [Homo sapiens]
Length = 255
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 63/161 (39%), Gaps = 29/161 (18%)
Query: 6 MDMIETEN------KQVELDDMKIRLKEMEEEATALR------QMHAKVGNEMASKQDPA 53
+ ++E EN EL+ +K+++ ME+ R Q + G P
Sbjct: 69 LSLLEQENLAECPLPDQELEAIKMKVCAMEQAEGTPRPPGVQQQAEEEEGTAAGQLLSPE 128
Query: 54 AGGSSLAN----REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPK 97
G L+ + E D RSV+VGN HF CG V+RVTI DKF G PK
Sbjct: 129 TVGCPLSGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPK 188
Query: 98 GYAYVEFLQ-SEAVQEALHLNESELHGRQLKVTVKRTNVPG 137
G E A Q A +++ G T PG
Sbjct: 189 GCCRKEPTSLGSAPQTAGAFEDTQAPGGHPSPTAASRAGPG 229
>gi|425780634|gb|EKV18640.1| Translation initiation factor 4B [Penicillium digitatum PHI26]
Length = 497
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 74 NQHFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
++ F CG N V + DK + PKG+ YVEF E +Q+AL L+ S GR ++ +V
Sbjct: 100 SEFFAGCGVTN-VRLVEDKLTKAPKGFGYVEFETVEGLQKALDLSGSSFQGRSIRTSV 156
>gi|320163233|gb|EFW40132.1| RNA binding domain-containing protein 39 [Capsaspora owczarzaki
ATCC 30864]
Length = 600
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 77 FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
F CG V VT+ D G+ KGYA+V+F + A + A+ LN E+ GR LKV
Sbjct: 375 FSPCGEVISVTLNRDN-GKSKGYAFVQFADAGAAKLAMELNGVEVAGRPLKV 425
>gi|350417503|ref|XP_003491454.1| PREDICTED: hypothetical protein LOC100748299 [Bombus impatiens]
Length = 622
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 12/73 (16%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
+SVF+GN HF+ CG + V IR ++ G KG+ YV F +AV AL
Sbjct: 445 KSVFIGNLHFNVDDDSVRNHFKRCGEIQSVRIIRDNQTGVGKGFGYVNFKSEDAVALALE 504
Query: 116 LNESELHGRQLKV 128
L+ + + R+++V
Sbjct: 505 LDGTTILNREIRV 517
>gi|285808363|gb|ADC35892.1| RNP-1 like RNA-binding protein [uncultured bacterium 246]
Length = 104
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 13/74 (17%)
Query: 68 RSVFVGNQHFQSC-----------GTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL- 114
R+VFVGN FQ+ G + R+ I TD+ GQ +G+A+VE E +A+
Sbjct: 2 RNVFVGNMSFQTTEGELRAAFETYGEIARIQIMTDRDTGQARGFAFVEMTNDEDAAKAIA 61
Query: 115 HLNESELHGRQLKV 128
LN ++L GR L V
Sbjct: 62 GLNGTQLDGRALNV 75
>gi|223943677|gb|ACN25922.1| unknown [Zea mays]
Length = 383
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 75 QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHG 123
QHF CG + RV+I TD + G KG AY++F ++V +AL L+ S++ G
Sbjct: 240 QHFSDCGEMTRVSIPTDHESGAIKGMAYIDFKDQDSVSKALELSGSDIGG 289
>gi|308505322|ref|XP_003114844.1| hypothetical protein CRE_28621 [Caenorhabditis remanei]
gi|308259026|gb|EFP02979.1| hypothetical protein CRE_28621 [Caenorhabditis remanei]
Length = 85
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 13/75 (17%)
Query: 69 SVFVGNQHFQS-----------CGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 115
SV+VGN FQ+ G V V I D+ G+P+G+A+VEF Q+A+
Sbjct: 7 SVYVGNAPFQTSEEEIGNFFSNVGNVTNVRIVYDRETGRPRGFAFVEFADEAGAQKAVQE 66
Query: 116 LNESELHGRQLKVTV 130
LN +E +GRQL+V +
Sbjct: 67 LNGAEFNGRQLRVNL 81
>gi|443722303|gb|ELU11225.1| hypothetical protein CAPTEDRAFT_227550 [Capitella teleta]
Length = 565
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 12/75 (16%)
Query: 66 DSRSVFVGNQ-----------HFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEA 113
D RSVF+GN HFQ CG V V + D+ G KG+ +V F AV A
Sbjct: 408 DKRSVFLGNLPLEVQEDEVRLHFQECGEVENVRLVRDRGTGIGKGFGFVLFKDVCAVDLA 467
Query: 114 LHLNESELHGRQLKV 128
L ++E GR+L+V
Sbjct: 468 LKMHEEVFRGRKLRV 482
>gi|323303035|gb|EGA56838.1| Nop12p [Saccharomyces cerevisiae FostersB]
Length = 459
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 12/63 (19%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
RS+FVGN +HF+ CG + V IR K KG+AYV+F ++V +AL
Sbjct: 279 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 338
Query: 116 LNE 118
LNE
Sbjct: 339 LNE 341
>gi|168009804|ref|XP_001757595.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691289|gb|EDQ77652.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 455
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 11/77 (14%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
S+++FV N + F CGTV V I D G+ +G+ +VEF EA Q+AL
Sbjct: 171 SKTLFVKNLAWAADQDKVFEFFSDCGTVADVRIAQDDNGRSRGFGHVEFETEEAAQKALQ 230
Query: 116 LNESELHGRQLKVTVKR 132
+ L GR + + R
Sbjct: 231 KSGQNLEGRDIFCDLAR 247
>gi|255572397|ref|XP_002527136.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223533496|gb|EEF35238.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 642
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 75 QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HF++CG + R+++ TD + G KG AYVEF + +AL N S+L + L V
Sbjct: 511 EHFKTCGEITRISLPTDYETGAIKGMAYVEFQDATGFNKALEFNGSQLGDQYLTV 565
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 11/77 (14%)
Query: 67 SRSVFVGNQHFQ-----------SCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
S+++FVGN FQ G V V D+ + KG+ +VEF EA EAL
Sbjct: 386 SKTLFVGNLPFQVERADVEDFFKGAGEVVDVRFALDQDQRFKGFGHVEFATIEAAHEALK 445
Query: 116 LNESELHGRQLKVTVKR 132
LN L+GR++++ + R
Sbjct: 446 LNGQSLNGREVRLDLAR 462
>gi|151945592|gb|EDN63833.1| nucleolar protein [Saccharomyces cerevisiae YJM789]
Length = 459
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 12/63 (19%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
RS+FVGN +HF+ CG + V IR K KG+AYV+F ++V +AL
Sbjct: 279 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 338
Query: 116 LNE 118
LNE
Sbjct: 339 LNE 341
>gi|6324532|ref|NP_014601.1| Nop12p [Saccharomyces cerevisiae S288c]
gi|74676462|sp|Q08208.1|NOP12_YEAST RecName: Full=Nucleolar protein 12
gi|1419839|emb|CAA99043.1| unnamed protein product [Saccharomyces cerevisiae]
gi|207341353|gb|EDZ69435.1| YOL041Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273915|gb|EEU08834.1| Nop12p [Saccharomyces cerevisiae JAY291]
gi|259149444|emb|CAY86248.1| Nop12p [Saccharomyces cerevisiae EC1118]
gi|285814848|tpg|DAA10741.1| TPA: Nop12p [Saccharomyces cerevisiae S288c]
gi|323346597|gb|EGA80883.1| Nop12p [Saccharomyces cerevisiae Lalvin QA23]
gi|349581127|dbj|GAA26285.1| K7_Nop12p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763209|gb|EHN04739.1| Nop12p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 459
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 12/63 (19%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
RS+FVGN +HF+ CG + V IR K KG+AYV+F ++V +AL
Sbjct: 279 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 338
Query: 116 LNE 118
LNE
Sbjct: 339 LNE 341
>gi|392296290|gb|EIW07392.1| Nop12p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 459
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 12/63 (19%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
RS+FVGN +HF+ CG + V IR K KG+AYV+F ++V +AL
Sbjct: 279 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 338
Query: 116 LNE 118
LNE
Sbjct: 339 LNE 341
>gi|356576977|ref|XP_003556606.1| PREDICTED: uncharacterized protein LOC100789712 [Glycine max]
Length = 377
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 77 FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVP 136
F+ CG V V + TD G+ +G+ +VEF +EA Q+AL LN +EL L+ ++ P
Sbjct: 186 FKPCGEVVDVRLHTDAEGRFRGFGHVEFATAEAAQKALQLNYTEL----LRCRIRVVLAP 241
Query: 137 GMKQHRPRR 145
+H R
Sbjct: 242 QKHKHTANR 250
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 77 FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
F++CG + + + TD G+ KG+ +VEF +EA Q+A H
Sbjct: 321 FKNCGEIVDIRLHTDHNGRFKGHGHVEFATTEAAQKAWH 359
>gi|190407303|gb|EDV10570.1| nucleolar protein 12 [Saccharomyces cerevisiae RM11-1a]
Length = 459
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 12/63 (19%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
RS+FVGN +HF+ CG + V IR K KG+AYV+F ++V +AL
Sbjct: 279 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 338
Query: 116 LNE 118
LNE
Sbjct: 339 LNE 341
>gi|168034644|ref|XP_001769822.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678931|gb|EDQ65384.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 74 NQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+ F CG V V I TD+ GQ KG+AYVEF + + +A L+ S+ +GR L V
Sbjct: 367 TEFFGECGNVVNVRIPTDRETGQIKGFAYVEFGSKDEMTKAFELDGSDFNGRSLVV 422
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 21/92 (22%)
Query: 52 PAAGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYA 100
P+AGGS +++FV N + F GTV V I D+ G +G+
Sbjct: 258 PSAGGS----------KTIFVKNLAWGVVQDTLYEFFADAGTVADVRIAKDEEGNSRGFG 307
Query: 101 YVEFLQSEAVQEALHLNESELHGRQLKVTVKR 132
+VEF +EA Q+AL + + GR++ + R
Sbjct: 308 HVEFETAEAAQKALSKSGQTVEGREIWCDLAR 339
>gi|425777998|gb|EKV16145.1| Translation initiation factor 4B [Penicillium digitatum Pd1]
Length = 481
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 74 NQHFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
++ F CG N V + DK + PKG+ YVEF E +Q+AL L+ S GR ++ +V
Sbjct: 100 SEFFAGCGVTN-VRLVEDKLTKAPKGFGYVEFETVEGLQKALDLSGSSFQGRSIRTSV 156
>gi|323335669|gb|EGA76952.1| Nop12p [Saccharomyces cerevisiae Vin13]
Length = 358
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 12/72 (16%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
RS+FVGN +HF+ CG + V IR K KG+AYV+F ++V +AL
Sbjct: 279 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 338
Query: 116 LNESELHGRQLK 127
LNE + ++ +
Sbjct: 339 LNEKPMKSQKTR 350
>gi|323352349|gb|EGA84884.1| Nop12p [Saccharomyces cerevisiae VL3]
Length = 346
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 12/63 (19%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
RS+FVGN +HF+ CG + V IR K KG+AYV+F ++V +AL
Sbjct: 267 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 326
Query: 116 LNE 118
LNE
Sbjct: 327 LNE 329
>gi|67900726|ref|XP_680619.1| hypothetical protein AN7350.2 [Aspergillus nidulans FGSC A4]
gi|40742531|gb|EAA61721.1| hypothetical protein AN7350.2 [Aspergillus nidulans FGSC A4]
Length = 496
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 77 FQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
F CG N V I DK + PKG+ YVEF + +++AL L+ + L GR ++V++
Sbjct: 101 FADCGVTN-VRIVEDKLTKAPKGFGYVEFETVDGLKKALDLSGATLQGRSIRVSI 154
>gi|259483295|tpe|CBF78566.1| TPA: translation initiation factor 4B (AFU_orthologue;
AFUA_2G16400) [Aspergillus nidulans FGSC A4]
Length = 497
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 77 FQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
F CG N V I DK + PKG+ YVEF + +++AL L+ + L GR ++V++
Sbjct: 102 FADCGVTN-VRIVEDKLTKAPKGFGYVEFETVDGLKKALDLSGATLQGRSIRVSI 155
>gi|449540429|gb|EMD31421.1| hypothetical protein CERSUDRAFT_119799 [Ceriporiopsis subvermispora
B]
Length = 1030
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 77 FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV 135
F++ G V V + D G+PKG+A+VEF + + + AL N E+ R++ VT+ T+V
Sbjct: 804 FKTYGAVKEVRMALDNNGRPKGFAFVEFEREDDARAALSANNHEMKKRRIAVTLADTHV 862
>gi|156392403|ref|XP_001636038.1| predicted protein [Nematostella vectensis]
gi|156223137|gb|EDO43975.1| predicted protein [Nematostella vectensis]
Length = 686
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 13/109 (11%)
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSE 108
AN+ E R+VFV N F SCG + + + D G+P YAY+EF +++
Sbjct: 153 ANKVEEIRRTVFVNNLDPEITAEMLLSFFSSCGDIKYIRMGGDD-GKPTRYAYIEFAETQ 211
Query: 109 AVQEALHLNESELHGRQLKVTVKRTNVPG-MKQHRPRRPNPFMVYQSRG 156
A+ AL + + G+ +KVT + V +H R+ F V+ G
Sbjct: 212 AIVSALQYSGAIFGGKPIKVTHSKNAVSKPPPKHSDRKRACFGVFNGMG 260
>gi|50543140|ref|XP_499736.1| YALI0A03773p [Yarrowia lipolytica]
gi|49645601|emb|CAG83659.1| YALI0A03773p [Yarrowia lipolytica CLIB122]
Length = 330
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 26/121 (21%)
Query: 24 RLKEMEEEATALRQMHAKVGNEMAS---KQDPAAGGSSLANREEVDSRSVFVGN------ 74
RL + E+ R++ K N K+DP + DSR +FVGN
Sbjct: 128 RLVSLSEQILNGRKLLIKNANSFEGRPEKKDPT----------DTDSRVLFVGNLPFNAT 177
Query: 75 -----QHFQSCGTVNRVTIRT-DKFGQPKGYAYVEFLQSEAVQEALHLNESE-LHGRQLK 127
HF+SCG + RV + + + G+ KG+++V+F ++A ++AL + L GR L+
Sbjct: 178 EEMLQDHFKSCGDIRRVRMMSFEDTGKSKGFSFVDFYDADATRKALKGRLYKYLEGRTLR 237
Query: 128 V 128
+
Sbjct: 238 L 238
>gi|146323064|ref|XP_755976.2| translation initiation factor 4B [Aspergillus fumigatus Af293]
gi|129558598|gb|EAL93938.2| translation initiation factor 4B [Aspergillus fumigatus Af293]
gi|159130031|gb|EDP55145.1| translation initiation factor 4B [Aspergillus fumigatus A1163]
Length = 494
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 74 NQHFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
N F CG N V I DK + PKG+ YVEF + ++ AL L+ + L GR ++V++
Sbjct: 88 NDLFAGCGVTN-VRIVEDKLTRSPKGFGYVEFETVDGLRRALDLSGTTLQGRAIRVSI 144
>gi|406602185|emb|CCH46236.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Wickerhamomyces ciferrii]
Length = 652
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 13/118 (11%)
Query: 75 QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL-HLNESELHGRQLKVT---- 129
+ FQS GT++ V + D+ G+ KG+ +V F E A+ +N+ L G+ L V
Sbjct: 362 EEFQSFGTISSVKVMIDESGKSKGFGFVSFSSPEEASRAISEMNQHMLAGKPLYVALAQR 421
Query: 130 --VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPP--FLYSPYGYGKIPRFRMPMRYSP 183
V+R+ + Q R N + Q+ A P F+ +P+ YG+ P+F P P
Sbjct: 422 KDVRRSQLEQQIQAR----NQLRLQQAAAAGGLPGQFIPTPFIYGQQPQFLPPGARGP 475
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 25/94 (26%)
Query: 46 MASKQDPAAGGSSLANREEVDSRSVFVGNQH-----------FQSCGTVNRVTIRTDKFG 94
M S++DPA + N VF+ N H F + G + + TD FG
Sbjct: 134 MWSQRDPAKRRNGEGN--------VFIKNLHPAIDNKALHDTFSAFGRILSCKVATDNFG 185
Query: 95 QPKGYAYVEFLQSEAVQEALH------LNESELH 122
Q KG+ +V F EA Q A+ LN +E++
Sbjct: 186 QSKGFGFVHFESPEAAQAAIENVNGMLLNNNEVY 219
>gi|328769388|gb|EGF79432.1| hypothetical protein BATDEDRAFT_35374 [Batrachochytrium
dendrobatidis JAM81]
Length = 555
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 25/115 (21%)
Query: 57 SSLANREEVDSRSVFVGNQH-----------FQSCGTVNRVTIRTDKFGQPKGYAYVEFL 105
+++A ++ VD R+++ GN H F SCG V +V + D + YA++EF
Sbjct: 133 ATIAGQDSVD-RTIYTGNIHSGLSQQEVSMLFSSCGDVTQVKMAGDATHSTR-YAFIEFA 190
Query: 106 QSEAVQEALHLNESELHGRQLKVTVKRTNV-------PGMKQHRPRRPNPFMVYQ 153
SE+ AL+L+ + GR +KV + ++ PGM RP+ MV +
Sbjct: 191 TSESAAMALNLHGMMVAGRAIKVNRSKHSIGRPIGMYPGM-----FRPDTDMVMK 240
>gi|327289491|ref|XP_003229458.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Anolis carolinensis]
Length = 905
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query: 64 EVDSRSVFVGNQH-------------FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAV 110
E D+ +VFV N F +CG V V G +GY YVEF + A
Sbjct: 648 EKDNVTVFVSNLSYSLAEPGPTLRALFSACGEVAEVRPIFSNKGSFRGYGYVEFKEETAA 707
Query: 111 QEALHLNESELHGRQLKVT--VKRTNVPGMK 139
+EAL ++ +L+GR + V+ V +T PG K
Sbjct: 708 REALKMDRQDLNGRLMFVSPCVDKTKQPGFK 738
Score = 35.4 bits (80), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 81 GTVNRVTIRTDKFGQPKGYAYVEFL-QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK 139
GTV V + T++ G+ KG AYVEF +++A Q L ++ ++ +KV + +N P K
Sbjct: 773 GTVKEVRLVTNRAGRSKGMAYVEFENEAQASQAVLKMDGLAVNDYVIKVAI--SNPPARK 830
Query: 140 QHRPRRPNPFMVYQSRGA 157
Q P QS GA
Sbjct: 831 QPEAAERAPQPPRQSYGA 848
>gi|195112762|ref|XP_002000941.1| GI10515 [Drosophila mojavensis]
gi|193917535|gb|EDW16402.1| GI10515 [Drosophila mojavensis]
Length = 433
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 63/148 (42%), Gaps = 26/148 (17%)
Query: 13 NKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAG-------GSSLANREEV 65
N V LD+ +I K + T ++ H +V PAA G+ A+ E
Sbjct: 209 NAYVVLDNPEIAQKALALNGTQFKENHLRV--------TPAAKCGEVKDVGNGQASSEAD 260
Query: 66 DSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL 114
R+VF+GN + F SCG ++ + D KG AYV F + +AV AL
Sbjct: 261 VKRTVFIGNLKYSASEEKLREIFSSCGEIDYIRCLQDGEKGCKGVAYVCFQKPDAVGLAL 320
Query: 115 HLNESELHGRQLKVTVKRTNVPGMKQHR 142
LNE+ L R + V G KQ R
Sbjct: 321 ELNETLLDDRPIHVERYSVKKLGAKQAR 348
>gi|328724063|ref|XP_001946404.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 87F-like
[Acyrthosiphon pisum]
Length = 290
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%)
Query: 75 QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 134
++F G + ++TI TDK GQ +G+ ++E+ +++V +A+ + ++ G +L V +
Sbjct: 118 EYFGKFGNITKITIVTDKGGQRRGFGFIEYDDTDSVDKAILVKSHQVDGEKLDVEKSISR 177
Query: 135 VPGMKQHRPRRPNP 148
G R NP
Sbjct: 178 SDGGGNRSSWRGNP 191
>gi|313234527|emb|CBY10484.1| unnamed protein product [Oikopleura dioica]
Length = 333
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 52 PAAGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGY 99
P G E +RSVFVGN F G V + D+ G+PKGY
Sbjct: 9 PQGGFGDFGGESEKAARSVFVGNIPYEATEEQIRDIFNEVGVVLSFRLVYDRETGKPKGY 68
Query: 100 AYVEFLQSEAVQEAL-HLNESELHGRQLKV 128
+ E+ ++ A+ +LN ELHGR L+V
Sbjct: 69 GFCEYKDTDTAMSAMRNLNTRELHGRNLRV 98
>gi|413921104|gb|AFW61036.1| putative nucleolin-like family protein [Zea mays]
Length = 262
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 75 QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHG 123
QHF CG + RV+I TD + G KG AY++F ++V +AL L+ S++ G
Sbjct: 119 QHFSDCGEMTRVSIPTDHESGAIKGMAYIDFKDQDSVSKALELSGSDIGG 168
>gi|366987885|ref|XP_003673709.1| hypothetical protein NCAS_0A07700 [Naumovozyma castellii CBS 4309]
gi|342299572|emb|CCC67328.1| hypothetical protein NCAS_0A07700 [Naumovozyma castellii CBS 4309]
Length = 127
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 24/100 (24%)
Query: 64 EVDSRSVFVGNQH-----------FQS--CG-TVNRVTIRTDKFGQPKG--------YAY 101
E+DSRSVF+ H F + CG + R+T+ ++ + KG AY
Sbjct: 28 EIDSRSVFIKGLHQDITPNEIESYFNTIGCGDAILRITVFDER--RKKGRKNKNVTLCAY 85
Query: 102 VEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQH 141
VEF E+ AL LNE G L+V KRTN+P K+H
Sbjct: 86 VEFQSLESHTRALELNECVFDGGMLRVFKKRTNLPASKRH 125
>gi|194334049|ref|YP_002015909.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM 271]
gi|194311867|gb|ACF46262.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM 271]
Length = 90
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 12/81 (14%)
Query: 75 QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALH-LNESELHGRQLKVTVKR 132
+ F G V+ I TDKF G+ KG+ +VE S+ EA+ LN+++L+GR +KV
Sbjct: 19 EAFGEFGDVSSANIITDKFTGRSKGFGFVEMSSSDDANEAIESLNDTDLNGRTIKV---- 74
Query: 133 TNVPGMKQHRPRRPNPFMVYQ 153
+ +PR P YQ
Sbjct: 75 ------NEAKPRAERPARRYQ 89
>gi|358332953|dbj|GAA51534.1| squamous cell carcinoma antigen recognized by T-cells 3 [Clonorchis
sinensis]
Length = 898
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Query: 52 PAAGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYA 100
P A G + + D R+VFV N + F+ CG ++ V + D G+ KGYA
Sbjct: 610 PKAHGEHVVHDPSRDDRTVFVSNLDYSTTEDDLRRTFEECGKLSSVRLVRDYAGRSKGYA 669
Query: 101 YVEFLQSEAVQEAL 114
YVEF Q+ A AL
Sbjct: 670 YVEFEQASAADVAL 683
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 75 QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 134
Q F GTV V I T + G PKG+AYVEF ++ AL + L G + + V +N
Sbjct: 755 QLFGEHGTVVSVRIATYRNGAPKGHAYVEFANADQASRALVATDGLLVGSK-NIAVAISN 813
Query: 135 VP-----GM----KQHRPRRPN 147
P G+ + ++P +PN
Sbjct: 814 PPVRNPTGLAVTKQSNQPTKPN 835
>gi|313243391|emb|CBY42167.1| unnamed protein product [Oikopleura dioica]
Length = 199
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 52 PAAGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGY 99
P G E +RSVFVGN F G V + D+ G+PKGY
Sbjct: 9 PQGGFGDFGGESEKAARSVFVGNIPYEATEEQIRDIFNEVGVVLSFRLVYDRETGKPKGY 68
Query: 100 AYVEFLQSEAVQEAL-HLNESELHGRQLKV 128
+ E+ ++ A+ +LN ELHGR L+V
Sbjct: 69 GFCEYKDTDTAMSAMRNLNTRELHGRNLRV 98
>gi|47230518|emb|CAF99711.1| unnamed protein product [Tetraodon nigroviridis]
Length = 172
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 48/105 (45%), Gaps = 23/105 (21%)
Query: 62 REEVDSRSVFVGNQ-----------HFQSCGTVNRVTIRTDKF-GQPKGY------AYVE 103
R + D+RSV+VGN HF CG VNRVTI D+F G PKG+
Sbjct: 52 RIDADNRSVYVGNVDYGATADELEIHFNGCGPVNRVTILCDRFSGHPKGFCPRGQICQAS 111
Query: 104 FLQSEAVQEAL----HLNESELHG-RQLKVTVKRTNVPGMKQHRP 143
Q+E EA+ + S LH R + T+ PG+ RP
Sbjct: 112 APQTEGAIEAVTPEAEVVVSVLHDTRTVPEGDSGTSPPGLNIRRP 156
>gi|268569468|ref|XP_002640530.1| Hypothetical protein CBG18692 [Caenorhabditis briggsae]
Length = 85
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 69 SVFVGNQHFQSC-----------GTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 115
SV+VGN FQS G V V I D+ G+P+G+A+VE+ ++ Q A++
Sbjct: 6 SVYVGNAPFQSTEQEIGDFFSQKGNVTNVRIVYDRETGRPRGFAFVEYSDEQSAQRAVNE 65
Query: 116 LNESELHGRQLKVTV 130
LN ++ +GRQL+V +
Sbjct: 66 LNGADFNGRQLRVNL 80
>gi|115478330|ref|NP_001062760.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|49387841|dbj|BAD26506.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|49388840|dbj|BAD26030.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|113630993|dbj|BAF24674.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|215695254|dbj|BAG90445.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737768|dbj|BAG96898.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641205|gb|EEE69337.1| hypothetical protein OsJ_28655 [Oryza sativa Japonica Group]
Length = 245
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAV 110
EEV +R ++VGN F GTV R + DK+ G+ + + +V E
Sbjct: 65 EEVAARKLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPEEA 124
Query: 111 QEALH-LNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMV 151
A+ LNE+E+ GR++KV V + +P + + P P P V
Sbjct: 125 NAAIESLNETEVGGRKIKVNVTESFLPNIDRSAP-EPEPVFV 165
>gi|254581390|ref|XP_002496680.1| ZYRO0D05654p [Zygosaccharomyces rouxii]
gi|238939572|emb|CAR27747.1| ZYRO0D05654p [Zygosaccharomyces rouxii]
Length = 441
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 41/80 (51%), Gaps = 16/80 (20%)
Query: 66 DSRSVFVGN-----------QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEA 113
+ RSVFVGN +HF SCG + V IR K KG+AYV+F V +A
Sbjct: 267 NKRSVFVGNLDFEEDEESLWRHFGSCGEIEYVRIIRDPKTNMGKGFAYVQFKDFPNVSKA 326
Query: 114 LHLN----ESELHGRQLKVT 129
L LN ES R+L+VT
Sbjct: 327 LLLNDKPLESNGKSRKLRVT 346
>gi|242039427|ref|XP_002467108.1| hypothetical protein SORBIDRAFT_01g019710 [Sorghum bicolor]
gi|241920962|gb|EER94106.1| hypothetical protein SORBIDRAFT_01g019710 [Sorghum bicolor]
Length = 664
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
S+++FVGN + F+ G V + + T G KGY +VEF +EA Q+AL
Sbjct: 412 SKTIFVGNLAYSIEREQVKEFFEEAGEVVDIRLSTFDDGSFKGYGHVEFATAEAAQKALE 471
Query: 116 LNESELHGRQLKV 128
+L GR L++
Sbjct: 472 FGGRDLMGRSLRI 484
Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 75 QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESEL 121
+HF+SCG + R++I D G KG AY++F +++ +A +N + L
Sbjct: 535 EHFRSCGDITRISIPKDYDTGASKGMAYMDFKDPDSLNKAYEMNGTYL 582
>gi|334184261|ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251465|gb|AEC06559.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 599
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 14/88 (15%)
Query: 67 SRSVFVGNQH-----------FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
+R ++VGN H F+S G+V V + D+ G KG+ +V+F + E + AL+
Sbjct: 322 ARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALN 381
Query: 116 LN-ESELHGRQLKVT--VKRTNVPGMKQ 140
LN + E+ GR +KV+ +T VP Q
Sbjct: 382 LNGQLEIAGRAIKVSAVTDQTEVPEAGQ 409
>gi|125563035|gb|EAZ08415.1| hypothetical protein OsI_30679 [Oryza sativa Indica Group]
Length = 226
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAV 110
EEV +R ++VGN F GTV R + DK+ G+ + + +V E
Sbjct: 65 EEVAARKLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPEEA 124
Query: 111 QEALH-LNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMV 151
A+ LNE+E+ GR++KV V + +P + + P P P V
Sbjct: 125 NAAIESLNETEVGGRKIKVNVTESFLPNIDRSAP-EPEPVFV 165
>gi|21553746|gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]
Length = 560
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 14/84 (16%)
Query: 67 SRSVFVGNQH-----------FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
+R ++VGN H F+S G+V V + D+ G KG+ +V+F + E + AL+
Sbjct: 284 ARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALN 343
Query: 116 LN-ESELHGRQLKVT--VKRTNVP 136
LN + E+ GR +KV+ +T VP
Sbjct: 344 LNGQLEIAGRAIKVSAVTDQTEVP 367
>gi|449454219|ref|XP_004144853.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
gi|449506986|ref|XP_004162902.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 562
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 67 SRSVFVGNQH-----------FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
+R ++VGN H F + GTV V + D+ G KG+ +++F + E + AL
Sbjct: 280 ARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGFIQFTRLEDARNALS 339
Query: 116 LN-ESELHGRQLKVTVKRTNVPGMK 139
LN + E+ GR +KV+ T+ PG++
Sbjct: 340 LNGQLEIAGRTIKVSTV-TDQPGLQ 363
>gi|323448546|gb|EGB04443.1| hypothetical protein AURANDRAFT_32583 [Aureococcus anophagefferens]
Length = 240
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 12/80 (15%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEF-LQSEAVQEAL 114
+R V+VGN HF+ CG+V + ++ G+ KG+ VEF EAV
Sbjct: 157 ARRVYVGNLAWGTSWQDLKDHFRQCGSVVHAKVMEERPGRSKGWGIVEFEAPEEAVAAIE 216
Query: 115 HLNESELHGRQLKVTVKRTN 134
LN+S+L GR ++V R +
Sbjct: 217 QLNDSDLDGRPIQVREDRED 236
Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 12/80 (15%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
+R VFVGN HF+ CGTV ++ ++ G+ KG VEF ++ A+
Sbjct: 24 ARRVFVGNLSWQTSWQDLKDHFRQCGTVVHASVMEERPGRSKGCGIVEFESADEAALAIE 83
Query: 116 -LNESELHGRQLKVTVKRTN 134
L++ EL GR ++V R +
Sbjct: 84 TLHDVELDGRPVQVREDRED 103
>gi|156375625|ref|XP_001630180.1| predicted protein [Nematostella vectensis]
gi|156217196|gb|EDO38117.1| predicted protein [Nematostella vectensis]
Length = 962
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 77 FQSCGTVNRVT-IRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV 135
F +CG V V IR K G KG+ YV F +AV AL +N +E GR+++V +
Sbjct: 804 FTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALKMNNAEFKGRKIRVFPSKDKP 863
Query: 136 PGMKQHRPRRPNP 148
+ R R+P P
Sbjct: 864 QTGQIQRQRKPKP 876
>gi|18398260|ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|20197280|gb|AAC64224.2| putative splicing factor [Arabidopsis thaliana]
gi|133778824|gb|ABO38752.1| At2g16940 [Arabidopsis thaliana]
gi|330251464|gb|AEC06558.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 561
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 14/84 (16%)
Query: 67 SRSVFVGNQH-----------FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
+R ++VGN H F+S G+V V + D+ G KG+ +V+F + E + AL+
Sbjct: 284 ARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALN 343
Query: 116 LN-ESELHGRQLKVT--VKRTNVP 136
LN + E+ GR +KV+ +T VP
Sbjct: 344 LNGQLEIAGRAIKVSAVTDQTEVP 367
>gi|308486599|ref|XP_003105496.1| CRE-PAB-2 protein [Caenorhabditis remanei]
gi|308255462|gb|EFO99414.1| CRE-PAB-2 protein [Caenorhabditis remanei]
Length = 730
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 77 FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH-LNESELHGRQLKVTVKRT 133
F G + + TD G+PKG+ +V F+ +A +A+ LNES L G LK++V R
Sbjct: 256 FSKYGEITSAVVMTDNSGKPKGFGFVAFVDPDAAIKAVDTLNESTLEGTDLKLSVCRA 313
>gi|334184263|ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251466|gb|AEC06560.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 610
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 14/88 (15%)
Query: 67 SRSVFVGNQH-----------FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
+R ++VGN H F+S G+V V + D+ G KG+ +V+F + E + AL+
Sbjct: 333 ARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALN 392
Query: 116 LN-ESELHGRQLKVT--VKRTNVPGMKQ 140
LN + E+ GR +KV+ +T VP Q
Sbjct: 393 LNGQLEIAGRAIKVSAVTDQTEVPEAGQ 420
>gi|212724137|ref|NP_001132813.1| uncharacterized protein LOC100194303 [Zea mays]
gi|194695464|gb|ACF81816.1| unknown [Zea mays]
Length = 303
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 75 QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHG 123
QHF CG + RV+I TD + G KG AY++F ++V +AL L+ S++ G
Sbjct: 119 QHFSDCGEMTRVSIPTDHESGAIKGMAYIDFKDQDSVSKALELSGSDIGG 168
>gi|20466772|gb|AAM20703.1| putative splicing factor [Arabidopsis thaliana]
Length = 420
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 14/84 (16%)
Query: 67 SRSVFVGNQH-----------FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
+R ++VGN H F+S G+V V + D+ G KG+ +V+F + E + AL+
Sbjct: 143 ARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALN 202
Query: 116 LN-ESELHGRQLKVT--VKRTNVP 136
LN + E+ GR +KV+ +T VP
Sbjct: 203 LNGQLEIAGRAIKVSAVTDQTEVP 226
>gi|109900313|ref|YP_663568.1| RNA-binding region RNP-1 [Pseudoalteromonas atlantica T6c]
gi|109702594|gb|ABG42514.1| RNA-binding region RNP-1 [Pseudoalteromonas atlantica T6c]
Length = 151
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 13/95 (13%)
Query: 54 AGGSSLANR-EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYA 100
+G SS+A + +E +S++++VGN QHF+ G V+ V + D+ G+ KGY
Sbjct: 55 SGTSSVAQQADEENSKTLYVGNLPYRANEQAVQQHFELQGQVHSVRLMKDRRTGKRKGYG 114
Query: 101 YVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV 135
+VE + A + +LN+SE R LKV + + V
Sbjct: 115 FVEMTAAGAEKAIQNLNDSEFQERTLKVRMAKDKV 149
>gi|347837372|emb|CCD51944.1| similar to translation initiation factor eIF4B [Botryotinia
fuckeliana]
Length = 575
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 74 NQHFQSCGTVNRVTIRTDKFG-QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
N+ F C +N V I DK +PKG+ Y EF E ++ AL LN+++ GR ++++V
Sbjct: 97 NEFFVGCECIN-VRIIEDKMEMKPKGFGYAEFGSLEGLKSALTLNQTQFQGRNIRISV 153
>gi|409049562|gb|EKM59039.1| hypothetical protein PHACADRAFT_249208 [Phanerochaete carnosa
HHB-10118-sp]
Length = 292
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 14/95 (14%)
Query: 67 SRSVFVG-----------NQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL 114
++++FVG F CG + ++TD+ G+ +G+ +V F EAV +AL
Sbjct: 38 TKTIFVGMLSWNVDNAWLESEFAQCGEIVSAHVQTDRNTGRSRGFGFVTFASPEAVDKAL 97
Query: 115 HLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPF 149
LN E+ GR + V ++ Q R RR F
Sbjct: 98 ELNGKEIDGR--SINVDKSVEKDQNQVRERRARTF 130
>gi|444314259|ref|XP_004177787.1| hypothetical protein TBLA_0A04750 [Tetrapisispora blattae CBS 6284]
gi|387510826|emb|CCH58268.1| hypothetical protein TBLA_0A04750 [Tetrapisispora blattae CBS 6284]
Length = 473
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 18/82 (21%)
Query: 66 DSRSVFVGN-----------QHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEA 113
+ RS+FVGN +HF SCG + V I R K KG+AYV+F ++V +A
Sbjct: 297 NKRSIFVGNLDFEEDEENLWKHFLSCGDIEYVRIVRDSKTNLGKGFAYVQFKDLQSVNKA 356
Query: 114 LHLNESEL------HGRQLKVT 129
L L + + GR+L+VT
Sbjct: 357 LLLADKVMIKKDGKKGRKLRVT 378
>gi|321264285|ref|XP_003196860.1| RNA-binding protein sce3 [Cryptococcus gattii WM276]
gi|317463337|gb|ADV25073.1| RNA-binding protein sce3, putative [Cryptococcus gattii WM276]
Length = 498
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 13/86 (15%)
Query: 69 SVFVGNQHFQS---------CGTVNRVTIR--TDKFGQPKGYAYVEFLQSEAVQEALHLN 117
+ F+GN F+ ++ V++R D G+PKG+ YVEF + +++AL +
Sbjct: 78 TAFIGNLSFEPDVEDEVRAFFNDLDPVSVRIVKDPQGKPKGFGYVEFKTQDGLKQALDRS 137
Query: 118 ESELHGRQLKVTVKRTNVPGMKQHRP 143
S+L GR ++V V P +H P
Sbjct: 138 MSQLQGRTIRVNV--AEAPSTSRHPP 161
>gi|297821731|ref|XP_002878748.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324587|gb|EFH55007.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 534
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 16/125 (12%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNQH 76
E+ ++K +++E+E +Q+ + E+ K P +G S ++ +SR + V N +
Sbjct: 394 EIKNVKEKMQELELRIIQSKQLKKQKIEEL--KPSPQSGESQY-QQDVTESRIIHVTNVN 450
Query: 77 FQS------------CGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNESELHG 123
+ + CG V VTI TD + PKG A+V F E+V +A+ L+ + +
Sbjct: 451 YAAKKEAISMFFSSKCGAVENVTIVTDPVTRHPKGSAFVTFATKESVNQAIALSGTMFYS 510
Query: 124 RQLKV 128
R +KV
Sbjct: 511 RPIKV 515
>gi|154309388|ref|XP_001554028.1| hypothetical protein BC1G_07588 [Botryotinia fuckeliana B05.10]
Length = 574
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 74 NQHFQSCGTVNRVTIRTDKFG-QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
N+ F C +N V I DK +PKG+ Y EF E ++ AL LN+++ GR ++++V
Sbjct: 96 NEFFVGCECIN-VRIIEDKMEMKPKGFGYAEFGSLEGLKSALTLNQTQFQGRNIRISV 152
>gi|297620951|ref|YP_003709088.1| RNA-binding protein [Waddlia chondrophila WSU 86-1044]
gi|297376252|gb|ADI38082.1| RNA-binding protein [Waddlia chondrophila WSU 86-1044]
gi|337293226|emb|CCB91217.1| putative RNA-binding protein rbpA [Waddlia chondrophila 2032/99]
Length = 92
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 76 HFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL-HLNESELHGRQLKVTVKRT 133
+F S G V I TD+F GQ KG+ +VEF EA +EA+ LN S GR + V +
Sbjct: 20 YFASFGEVLSAKIITDRFTGQSKGFGFVEFADKEAAEEAIKELNGSNFEGRSIVVNEAKP 79
Query: 134 NVPGMKQHRPRR 145
M+ PRR
Sbjct: 80 ----MEDRPPRR 87
>gi|147769692|emb|CAN65531.1| hypothetical protein VITISV_039630 [Vitis vinifera]
Length = 555
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 75 QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL-HLNESELHGRQLKVTVK-- 131
+HF SCG + + G KG+ +V F SE Q+AL LN + LHGR L + +
Sbjct: 327 EHFSSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALTTLNGTLLHGRSLYIAMAQR 386
Query: 132 ---RTNVPGMKQHRPRRPNPF 149
R +P MKQ + N +
Sbjct: 387 KEDRQRIP-MKQAQQGNTNNW 406
>gi|390594976|gb|EIN04384.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 611
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 47 ASKQDPAAGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FG 94
ASK+ A GS+ +E +S+++FVG F CG V + D+ G
Sbjct: 322 ASKKTKLADGSAAPAEQEEESKTIFVGRLSWNVDDDQLASEFAECGEVVSARVNIDRNTG 381
Query: 95 QPKGYAYVEFLQSEAVQEALH-LNESELHGRQLKVTVKRTNVPGMKQHRPR 144
+ +G+ +VEF + +VQ+A+ +N E+ GR + V PG+ +++ R
Sbjct: 382 KSRGFGHVEFADASSVQKAIDTMNGKEIDGRPVNV----DRAPGLNKNQQR 428
>gi|301095902|ref|XP_002897050.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108479|gb|EEY66531.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 286
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 76 HFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 134
HF SCGTV V + R G+P+GYA+V F A+++AL L+ L R L +++R
Sbjct: 81 HFSSCGTVREVRMPRYQDSGKPRGYAHVVFDDEAALEKALELDGQYLFNRYL--SIRRAE 138
Query: 135 VP 136
P
Sbjct: 139 AP 140
>gi|17508585|ref|NP_493022.1| Protein R09B3.2 [Caenorhabditis elegans]
gi|3879015|emb|CAB03236.1| Protein R09B3.2 [Caenorhabditis elegans]
Length = 83
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 13/75 (17%)
Query: 69 SVFVGNQHFQ-----------SCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL-H 115
SV+VGN FQ S G +N V I D+ G+P+G+A++EF + + Q A+
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 116 LNESELHGRQLKVTV 130
+N +E +GR L+V +
Sbjct: 66 MNGAEFNGRPLRVNL 80
>gi|358055852|dbj|GAA98197.1| hypothetical protein E5Q_04880 [Mixia osmundae IAM 14324]
Length = 545
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 16/78 (20%)
Query: 67 SRSVFVGNQHFQSC-----------GTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEAL 114
S++VFVGN F+S G VN V + TD + G+PKG+AYVEF ++ ++A+
Sbjct: 388 SQTVFVGNLSFESTQDAVWESFSDFGGVNSVRVPTDMETGRPKGFAYVEFGDVDSAKKAV 447
Query: 115 HLNES----ELHGRQLKV 128
S E+ GR++++
Sbjct: 448 DQGRSSEGLEIDGRRVRL 465
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 12/73 (16%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH 115
++VFVG + F+SCG + + TD+ G+ +G+ YV+F+ + + AL
Sbjct: 288 KNVFVGGLSWGITNESLQEAFESCGEIVSARVVTDRETGKSRGFGYVDFVDAAGAKAALE 347
Query: 116 LNESELHGRQLKV 128
+ +EL GR + V
Sbjct: 348 MAGTELDGRTINV 360
>gi|115460618|ref|NP_001053909.1| Os04g0620700 [Oryza sativa Japonica Group]
gi|75327488|sp|Q7XTT4.2|NUCL2_ORYSJ RecName: Full=Nucleolin 2; AltName: Full=Protein NUCLEOLIN LIKE 2
gi|38344339|emb|CAD41755.2| OSJNBa0058K23.21 [Oryza sativa Japonica Group]
gi|113565480|dbj|BAF15823.1| Os04g0620700 [Oryza sativa Japonica Group]
gi|215737156|dbj|BAG96085.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 707
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 75 QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HF SCG + RV+I D + G KG AY++F + ++ +A LN S+L G L V
Sbjct: 571 EHFGSCGEITRVSIPKDYETGASKGMAYMDFADNGSLSKAYELNGSDLGGYSLYV 625
Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
S+++FVGN Q FQ G V + T + G +G+ +VEF +EA ++AL
Sbjct: 448 SKTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALE 507
Query: 116 LNESELHGRQLKVTVKR 132
L +L GR +++ + R
Sbjct: 508 LAGHDLMGRPVRLDLAR 524
>gi|19115130|ref|NP_594218.1| RNA-binding protein Nop12 (predicted) [Schizosaccharomyces pombe
972h-]
gi|17367899|sp|O13741.1|NOP12_SCHPO RecName: Full=Nucleolar protein 12
gi|2462671|emb|CAB11047.1| RNA-binding protein Nop12 (predicted) [Schizosaccharomyces pombe]
Length = 438
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 13/82 (15%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALH 115
R VFVGN ++F CG+++ V I D K KG+AY++F + V +AL
Sbjct: 270 RCVFVGNLAFEAEEEPLWRYFGDCGSIDYVRIVRDPKTNLGKGFAYIQFKDTMGVDKALL 329
Query: 116 LNESEL-HGRQLKVTVKRTNVP 136
LNE ++ GR L++ ++ P
Sbjct: 330 LNEKKMPEGRTLRIMRAKSTKP 351
>gi|410626020|ref|ZP_11336790.1| RNA-binding protein [Glaciecola mesophila KMM 241]
gi|410154640|dbj|GAC23559.1| RNA-binding protein [Glaciecola mesophila KMM 241]
Length = 151
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 13/95 (13%)
Query: 54 AGGSSLANR-EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYA 100
+G SS+A + +E +S++++VGN QHF+ G V+ V + D+ G+ KGY
Sbjct: 55 SGTSSVAQQADEENSKTLYVGNLPYRANEQAVQQHFELQGQVHSVRLMKDRRTGKRKGYG 114
Query: 101 YVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV 135
+VE + A + +LN+SE R LKV + + V
Sbjct: 115 FVEMTAAGAEKAIQNLNDSEFQERTLKVRMAKDKV 149
>gi|302696625|ref|XP_003037991.1| hypothetical protein SCHCODRAFT_47280 [Schizophyllum commune H4-8]
gi|300111688|gb|EFJ03089.1| hypothetical protein SCHCODRAFT_47280 [Schizophyllum commune H4-8]
Length = 449
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 17/102 (16%)
Query: 42 VGNEMASKQDPAAGGSSLANREEVDSRSVFVGNQHFQS-----------CGTVNRVTIRT 90
V + A K+ A G + ++ SV+VGN F++ G V R+ + T
Sbjct: 74 VEDGSAPKKRKLANGQAAVDQPTKRQNSVWVGNMSFKTTQDDLRSFFKEAGEVTRINMPT 133
Query: 91 DKFGQP------KGYAYVEFLQSEAVQEALHLNESELHGRQL 126
G+P KGYAYV+F EA A+ L+E L GR+L
Sbjct: 134 KPSGRPGGSIENKGYAYVDFATPEAKAAAIALSEHPLIGRKL 175
>gi|453084590|gb|EMF12634.1| RRM_1-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 344
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 14/89 (15%)
Query: 59 LANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQ 106
+A RE+ R VF+GN F G V + DK GQPKG+ ++E+
Sbjct: 1 MAQREK-GGRVVFIGNIPYGVSEEQIMDIFGRAGQVVNFRLVYDKETGQPKGFGFLEYTD 59
Query: 107 SEAVQEAL-HLNESELHGRQLKVTVKRTN 134
++A A+ +LNES+L+GR L+V N
Sbjct: 60 TDAAASAVRNLNESDLNGRTLRVDYSNDN 88
>gi|440492971|gb|ELQ75490.1| Splicing factor RNPS1, SR protein superfamily, partial
[Trachipleistophora hominis]
Length = 344
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 49 KQDPAAGGSSLA-NREEVDSRSVFVGNQHFQSCGTVNRVTI-RTDKFGQP-KGYAYVEFL 105
K +P S + N + ++ V + +H +CGT+ V I + K GQP K YA+VEF+
Sbjct: 255 KDEPVTANSVIVRNLDHTITKQVLI--KHLHACGTIKSVEIPQARKSGQPTKNYAFVEFM 312
Query: 106 QSEAVQEALHLNES-ELHGRQLKVTVKRT 133
V A+ LN ++GR+L ++ K+
Sbjct: 313 NRSGVNIAMSLNNKLVINGRRLSISRKKV 341
>gi|115387941|ref|XP_001211476.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195560|gb|EAU37260.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 376
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 77 FQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
F CG N V I DK + PKG+ YVEF + +++AL L+ + L GR ++V++
Sbjct: 99 FAECGVTN-VRIVEDKLTRSPKGFGYVEFETVDGLKKALDLSGATLQGRAIRVSI 152
>gi|169858994|ref|XP_001836138.1| hypothetical protein CC1G_10919 [Coprinopsis cinerea okayama7#130]
gi|116502752|gb|EAU85647.1| hypothetical protein CC1G_10919 [Coprinopsis cinerea okayama7#130]
Length = 451
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 12/73 (16%)
Query: 69 SVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLN 117
+ FVGN HF +N V I D+ +PKG+ YVEF + ++EAL
Sbjct: 76 TAFVGNLAFDLVEDDIANHFADL-KINNVKIIKDRDDRPKGFGYVEFQTVDDLKEALGRT 134
Query: 118 ESELHGRQLKVTV 130
S L GR ++V+V
Sbjct: 135 GSSLAGRAVRVSV 147
>gi|308505902|ref|XP_003115134.1| CRE-EXO-3 protein [Caenorhabditis remanei]
gi|308259316|gb|EFP03269.1| CRE-EXO-3 protein [Caenorhabditis remanei]
Length = 334
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 76 HFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL-HLNESELHGRQLKVTV 130
+F S G V V I D+ G+P+G+A+VEF + Q+A LN ++ +GRQL+V +
Sbjct: 275 YFSSVGQVTNVKIVCDRETGRPRGFAFVEFADEASAQKACEQLNGADFNGRQLRVNL 331
>gi|428176376|gb|EKX45261.1| hypothetical protein GUITHDRAFT_87179 [Guillardia theta CCMP2712]
Length = 137
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 41/92 (44%), Gaps = 13/92 (14%)
Query: 54 AGGSSLANREEVD-SRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAY 101
AGG E D R VFVGN HF CG V R + T++ G+ +G
Sbjct: 45 AGGLENGEGTEGDEDRKVFVGNLSWSTNSEQLKNHFDVCGEVVRADVFTERSGRSRGCGI 104
Query: 102 VEFLQSEAVQEA-LHLNESELHGRQLKVTVKR 132
VEF + A + +N SEL GR + V R
Sbjct: 105 VEFTSPDGAHNAMMMMNNSELDGRSIFVREDR 136
>gi|344276876|ref|XP_003410231.1| PREDICTED: putative RNA-binding protein 11-like [Loxodonta
africana]
Length = 238
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAV 110
REE D R+VFVGN + F G + +VTI D+ G+PK + +V F E+V
Sbjct: 5 REEAD-RTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESV 63
Query: 111 QEALH-LNESELHGRQLKV 128
A+ LN L+GR + V
Sbjct: 64 SYAIALLNGIRLYGRPINV 82
>gi|407042435|gb|EKE41325.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 178
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQE 112
E D+RSV V N Q F + G V VT+ K G K YAY+E EA +
Sbjct: 55 ERDNRSVCVTNLDPNATKEQLQQLFSTVGNVLLVTLPLTKSGVSKRYAYIELDSVEARER 114
Query: 113 AL-HLNESELHGRQLKVTVKRTNV 135
A+ +LN ++L ++ V VKRTN+
Sbjct: 115 AVTNLNGTKLGENEISVAVKRTNI 138
>gi|357168503|ref|XP_003581679.1| PREDICTED: uncharacterized protein LOC100838448 [Brachypodium
distachyon]
Length = 741
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 75 QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HF SCG + RV+I D + G KG AY+EF ++ +A L+ S+L G L V
Sbjct: 595 KHFGSCGEITRVSIPKDYETGASKGIAYMEFSDQSSLSKAFELSGSDLGGFSLYV 649
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
S+++FVGN + FQ V V T + G KG+A+VEF +EAV +A
Sbjct: 472 SKTLFVGNLSYSVGIEQVKEFFQEVAEVVDVRFATFEDGSSKGFAHVEFATTEAVHKARE 531
Query: 116 LNESELHGRQLKVTVKR 132
LN +L GR +++ + R
Sbjct: 532 LNGHDLMGRPVRLDLAR 548
>gi|327274927|ref|XP_003222226.1| PREDICTED: deleted in azoospermia-like [Anolis carolinensis]
Length = 308
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 82/198 (41%), Gaps = 33/198 (16%)
Query: 19 DDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN---- 74
D+ K E++E A + + + S Q PA + ++ +VFVG
Sbjct: 8 DEQKENASEIKESAGNQDAQNTSIPWD-ESTQLPATSQGYVLPEGKIMPNTVFVGGIDIR 66
Query: 75 -------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLK 127
F GTV V I TD+ G KGY +V FL + VQ+ + ++ HG++LK
Sbjct: 67 MDETEIRNFFARYGTVKEVKIITDRTGVSKGYGFVSFLDNVDVQKIVE-SQINFHGKKLK 125
Query: 128 VTVKRTNVPGM-KQHRPRRP----NPFMVYQS-----RGAIIPPFLYSP-------YGYG 170
+ P + H P RP +P + S + PP + SP Y YG
Sbjct: 126 LGPAIRKHPNLCAYHVPPRPVLINSPTPQFHSVWNNQETYMQPPAMMSPVTQYIQTYPYG 185
Query: 171 K---IPRFRMPMRYSPYY 185
+ + ++PM Y P Y
Sbjct: 186 SPALLIQHQVPMGYQPTY 203
>gi|125591671|gb|EAZ32021.1| hypothetical protein OsJ_16200 [Oryza sativa Japonica Group]
Length = 728
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 75 QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HF SCG + RV+I D + G KG AY++F + ++ +A LN S+L G L V
Sbjct: 592 EHFGSCGEITRVSIPKDYETGASKGMAYMDFADNGSLSKAYELNGSDLGGYSLYV 646
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
S+++FVGN Q FQ G V + T + G +G+ +VEF +EA ++AL
Sbjct: 469 SKTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALE 528
Query: 116 LNESELHGRQLKVTVKR 132
L +L GR +++ + R
Sbjct: 529 LAGHDLMGRPVRLDLAR 545
>gi|414871128|tpg|DAA49685.1| TPA: putative nucleolin-like family protein [Zea mays]
Length = 196
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 75 QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HF SCG + R++I D G KG AY++F +++ +A LN ++L G L V
Sbjct: 58 EHFGSCGDITRISIPKDYDTGVSKGMAYMDFKDPDSLNKAYELNGTDLGGYSLYV 112
>gi|359488537|ref|XP_003633774.1| PREDICTED: uncharacterized protein LOC100853981 [Vitis vinifera]
Length = 787
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 5 DMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE 64
+MDMI + L D+K+ EE+ KVG A G ++N +
Sbjct: 136 EMDMIR--GLLIRLRDVKL---SSEEDGVIW-----KVGGHGKYGVKEAYNGLVVSNACD 185
Query: 65 VDSRSVFVGNQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL 114
R V+V N+ F +CG + V + TD+ G+ KGY +V F EA +A+
Sbjct: 186 FPHRGVWV-NKVFSTCGEIIEVRMMTDQNGKSKGYCFVRFTTKEAANKAI 234
>gi|348677689|gb|EGZ17506.1| hypothetical protein PHYSODRAFT_501188 [Phytophthora sojae]
Length = 293
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 76 HFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 134
HF SCGTV V + R G+P+GYA+V F A+++AL L+ L R L +++R
Sbjct: 87 HFSSCGTVREVRMPRYQDSGKPRGYAHVVFDDEAALKKALKLDGQYLFNRYL--SIRRAE 144
Query: 135 VP 136
P
Sbjct: 145 AP 146
>gi|67478542|ref|XP_654661.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56471729|gb|EAL49274.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449709729|gb|EMD48937.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 178
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQE 112
E D+RSV V N Q F + G V VT+ K G K YAY+E EA +
Sbjct: 55 ERDNRSVCVTNLDPNATKEQLQQLFSTVGNVLLVTLPLTKSGVSKRYAYIELDSVEARER 114
Query: 113 AL-HLNESELHGRQLKVTVKRTNV 135
A+ +LN ++L ++ V VKRTN+
Sbjct: 115 AVTNLNGTKLGENEISVAVKRTNI 138
>gi|330802862|ref|XP_003289431.1| hypothetical protein DICPUDRAFT_11237 [Dictyostelium purpureum]
gi|325080473|gb|EGC34027.1| hypothetical protein DICPUDRAFT_11237 [Dictyostelium purpureum]
Length = 168
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 75 QHFQSCGTVNRVTIRT-DKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+ FQ CG + RV++ T + G+ KG+A+V F EAV +A+ L + GR+++V
Sbjct: 110 EFFQGCGKITRVSLPTYEDSGRLKGFAFVSFDSEEAVDKAIALAGTMFEGREIQV 164
>gi|384245275|gb|EIE18770.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 351
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 55/123 (44%), Gaps = 24/123 (19%)
Query: 43 GNEMASKQDPAAGGSSLANREEVDSRSVFVGNQH-----------FQSCGTVNRVTIRTD 91
G + A Q+PA GS A +++++VGN H F + G V + I D
Sbjct: 3 GFQQAVSQNPARLGSGDA------AKALYVGNLHPFVTDAMLQEIFSTLGQVGEIKIIKD 56
Query: 92 KF-GQPKGYAYVEFLQSEAVQEALH-LNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPF 149
K G GY +V+FL A AL LN LHG++L+V N K R + F
Sbjct: 57 KLTGLSAGYGFVQFLDHRAADMALQSLNGRVLHGQELRV-----NWAFQKDQREDSASQF 111
Query: 150 MVY 152
++
Sbjct: 112 QIF 114
>gi|378726631|gb|EHY53090.1| translation initiation factor eIF-4B [Exophiala dermatitidis
NIH/UT8656]
Length = 540
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 74 NQHFQSCGTVNRVTIRTDKFG-QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
N F C N V I DK +PKG+ YVEF + ++ AL L+ + L GRQ++V+V
Sbjct: 89 NDFFSQCQVTN-VRIVEDKLDRKPKGFGYVEFATLDGLKAALALSGNNLAGRQVRVSV 145
>gi|297847164|ref|XP_002891463.1| hypothetical protein ARALYDRAFT_474037 [Arabidopsis lyrata subsp.
lyrata]
gi|297337305|gb|EFH67722.1| hypothetical protein ARALYDRAFT_474037 [Arabidopsis lyrata subsp.
lyrata]
Length = 550
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 74 NQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HF SCG + V++ D+ G KG AYV F SE ++AL LN S++ G L V
Sbjct: 419 TEHFSSCGEIKSVSVPMDRDTGNSKGIAYVAF--SEGKEKALELNGSDMGGWSLVV 472
Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 22/91 (24%)
Query: 52 PAAGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGY 99
PAAGGS +++F N F+ G V V T++ G +G+
Sbjct: 288 PAAGGS----------KTLFAANLSFNIERSDVENFFKEVGEVVDVRFSTNRDDGSFRGF 337
Query: 100 AYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
+VEF SE Q+AL + L GR++++ +
Sbjct: 338 GHVEFASSEEAQKALEFHGRPLLGREIRLDI 368
>gi|157127661|ref|XP_001655026.1| hypothetical protein AaeL_AAEL010899 [Aedes aegypti]
gi|108872845|gb|EAT37070.1| AAEL010899-PA [Aedes aegypti]
Length = 1018
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 76 HFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV 135
HFQ CGT+ + IRTD F AYV F +V+ A+ N L G LK+ + N+
Sbjct: 25 HFQDCGTIAFLQIRTDDF------AYVTFEDKSSVKNAMSKNNQPLKGSSLKIQLLTRNL 78
Query: 136 PGM 138
M
Sbjct: 79 DIM 81
>gi|225156280|ref|ZP_03724758.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
gi|224803012|gb|EEG21257.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
Length = 106
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 18/102 (17%)
Query: 61 NREEVDSRSVFVGNQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH-LNE 118
N E D R+ F +CGT+ V + TD+ G+P+G+A+V F +E Q A LN
Sbjct: 13 NTSEADLRTAF------STCGTLTDVFLATDRETGRPRGFAFVTFDTAEESQLATEKLNG 66
Query: 119 SELHGRQLKVTVKR----TNVPGMKQHRP-RRPNPFMVYQSR 155
++L GR + V R T G + P R+P +QSR
Sbjct: 67 TDLGGRAITVNEARPKEATGGGGSRNFGPDRKP-----FQSR 103
>gi|389744897|gb|EIM86079.1| hypothetical protein STEHIDRAFT_98435 [Stereum hirsutum FP-91666
SS1]
Length = 1064
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%)
Query: 77 FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVP 136
F++ G + + + D+ G+ KG+A+VEF Q + AL+ N EL R++ VT+ + V
Sbjct: 835 FKTYGPIKEIRMTVDEQGRSKGFAFVEFEQEKDALNALNANNHELKARRMAVTMSDSRVR 894
Query: 137 GMKQHRP 143
++ +P
Sbjct: 895 SRRKDQP 901
>gi|167386758|ref|XP_001737893.1| RNA-binding protein SGN1 [Entamoeba dispar SAW760]
gi|165899137|gb|EDR25806.1| RNA-binding protein SGN1, putative [Entamoeba dispar SAW760]
Length = 178
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQE 112
E D+RSV V N Q F + G V VT+ K G K YAY+E EA +
Sbjct: 55 ERDNRSVCVTNLDPNATKEQLQQLFSTVGNVLLVTLPLTKSGVSKRYAYIELDSVEARER 114
Query: 113 AL-HLNESELHGRQLKVTVKRTNV 135
A+ +LN ++L ++ V VKRTN+
Sbjct: 115 AVTNLNGTKLGENEISVAVKRTNI 138
>gi|451849708|gb|EMD63011.1| hypothetical protein COCSADRAFT_119937 [Cochliobolus sativus
ND90Pr]
Length = 555
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 76 HFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESE---LHGRQLKVTVK 131
H CGT+ V +R K KG+AYV+F+ V+ AL LNE + R+L++T
Sbjct: 391 HLSKCGTIESVRVVRDAKTRVGKGFAYVQFIDENGVEAALQLNEKNFPPMLPRKLRITRC 450
Query: 132 RTNVPGMKQHRPRRPNP 148
+ K+ +PR P P
Sbjct: 451 KAE---KKKDKPRGPPP 464
>gi|189199124|ref|XP_001935899.1| translation initiation factor eIF4B [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187982998|gb|EDU48486.1| translation initiation factor eIF4B [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 527
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 74 NQHFQSCGTVNRVTIRTDKFG-QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
N F C N V I DK +PKG+ YVEF E +++AL L+ + GR ++V+V
Sbjct: 91 NDFFADCEVTN-VRIVEDKLDRKPKGFGYVEFGSVEGLKKALDLSGTPFQGRNIRVSV 147
>gi|428181978|gb|EKX50840.1| hypothetical protein GUITHDRAFT_85230, partial [Guillardia theta
CCMP2712]
Length = 243
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 14/83 (16%)
Query: 60 ANREEVDSRSVFVGN-----------QHFQSCGTVN--RVTIRTDKFGQPKGYAYVEFLQ 106
+R SRSVFVGN F++ G V R ++ GQPKG+ + EF
Sbjct: 3 GSRGSQASRSVFVGNIPYNATEEQLEDIFRAVGHVVSFRWLVKNSDTGQPKGFGFCEFRD 62
Query: 107 SEAVQEAL-HLNESELHGRQLKV 128
++ + A+ +LN +E +GR L++
Sbjct: 63 AQTAESAIRNLNNTEFNGRLLRI 85
>gi|116309951|emb|CAH66982.1| H0714H04.9 [Oryza sativa Indica Group]
Length = 704
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 75 QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HF SCG + RV+I D + G KG AY++F + ++ +A LN S+L G L V
Sbjct: 568 EHFGSCGEITRVSIPRDYETGASKGMAYMDFADNGSLSKAYELNGSDLGGYSLYV 622
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
S+++FVGN Q FQ G V + T + G +G+ +VEF +EA ++AL
Sbjct: 445 SKTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALE 504
Query: 116 LNESELHGRQLKVTVKR 132
L +L GR +++ + R
Sbjct: 505 LAGHDLMGRPVRLDLAR 521
>gi|321463774|gb|EFX74787.1| hypothetical protein DAPPUDRAFT_306960 [Daphnia pulex]
Length = 432
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 12/80 (15%)
Query: 67 SRSVFVGNQ-----------HFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL 114
S +FVGN HF CG ++ V I D+ G KG+ YV F +++V+ AL
Sbjct: 248 SLGIFVGNLTFDVTDEALWLHFGECGKISDVRIIRDRVNGMGKGFGYVNFESADSVELAL 307
Query: 115 HLNESELHGRQLKVTVKRTN 134
L++S L+ R ++V+ + N
Sbjct: 308 KLDQSLLNDRPIRVSRCKKN 327
>gi|308801921|ref|XP_003078274.1| CwfJ / zinc finger (ISS) [Ostreococcus tauri]
gi|116056725|emb|CAL53014.1| CwfJ / zinc finger (ISS) [Ostreococcus tauri]
Length = 752
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 74 NQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVK 131
+++F CG + V + GQ +GY ++ F +E VQ AL NE+ GR + V +K
Sbjct: 111 SEYFGECGELVDVHLARKPDGQSRGYCFIAFATAEGVQAALERNEASFFGRDITVEMK 168
>gi|242080817|ref|XP_002445177.1| hypothetical protein SORBIDRAFT_07g005510 [Sorghum bicolor]
gi|241941527|gb|EES14672.1| hypothetical protein SORBIDRAFT_07g005510 [Sorghum bicolor]
Length = 647
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 75 QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHG 123
+HF+ CG + RV+I TD + G KG AY++F ++V +A+ L+ +++ G
Sbjct: 503 EHFKKCGDITRVSIPTDYESGAIKGMAYMDFKDQDSVSKAIELSGTDIGG 552
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 75 QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNES-ELHGRQLKV 128
+ F G V V T + G KG+ YVEF+ +EA ++A +S EL GR++++
Sbjct: 398 EFFADAGEVVDVRFPTHEDGHRKGFCYVEFVSAEAAEKAFKEKQSTELQGREVRL 452
>gi|356576979|ref|XP_003556607.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Glycine max]
Length = 248
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 75 QHFQSCGTVNRVTIRT-DKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRT 133
+HF SCG + R++I T G KG+A++ F +V++ALHL+++EL G L+ +
Sbjct: 184 EHFGSCGEIQRISIPTFPDSGAVKGFAHLGFKDVVSVRKALHLDQNELGGFPLRAVAEMD 243
Query: 134 NVPGM 138
+ G+
Sbjct: 244 VITGV 248
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 77 FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV-------- 128
F+ CG + V + + G+ G+ VEF +EA ++AL L+ +EL R + V
Sbjct: 82 FKECGKIVDVRLHRNHNGRLNGFGQVEFATAEAAKKALELHNTELLRRPIGVDLAEEKGE 141
Query: 129 -TVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIP-----PFLYSPYG-YGKIPRFRMP 178
T R+N Q R +P + + +P L +G G+I R +P
Sbjct: 142 YTYSRSNWSNSFQKCERAQSPTVFVTGFDSSLPAEKLKASLEEHFGSCGEIQRISIP 198
>gi|156373168|ref|XP_001629405.1| predicted protein [Nematostella vectensis]
gi|156216405|gb|EDO37342.1| predicted protein [Nematostella vectensis]
Length = 817
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 12/78 (15%)
Query: 65 VDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQ-SEAVQE 112
+D ++FV N + F G V +V + T++ G+PKGY YVE+ Q S A
Sbjct: 691 LDKHTLFVSNLPFDAKESEIEELFSKHGVVKQVRLVTNRAGKPKGYGYVEYEQESSASTA 750
Query: 113 ALHLNESELHGRQLKVTV 130
L L+++E+ GR + V +
Sbjct: 751 VLTLDKTEVKGRTISVAL 768
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 51 DPAAGGSSLANREEV-DSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKG 98
+PAA + EE D R VF+ N F G V V I + G+ KG
Sbjct: 583 EPAAKKPCGESEEESSDPRKVFISNLLFSITEDHLRDKFSKLGEVLDVRIVKNMAGRSKG 642
Query: 99 YAYVEFLQSEAVQEALHLNESELHGRQLKVT 129
YAYVEF VQ AL ++ ++ GR + ++
Sbjct: 643 YAYVEFNNESTVQAALAMDREKMEGRPMFIS 673
>gi|330923477|ref|XP_003300256.1| hypothetical protein PTT_11446 [Pyrenophora teres f. teres 0-1]
gi|311325702|gb|EFQ91646.1| hypothetical protein PTT_11446 [Pyrenophora teres f. teres 0-1]
Length = 529
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 74 NQHFQSCGTVNRVTIRTDKFG-QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
N F C N V I DK +PKG+ YVEF E +++AL L+ + GR ++V+V
Sbjct: 93 NDLFADCEVTN-VRIVEDKLDRKPKGFGYVEFGSVEGLKKALDLSGTSFQGRNIRVSV 149
>gi|410923104|ref|XP_003975022.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Takifugu rubripes]
Length = 933
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 79 SCGTVNRVTIRTDKFGQPKGYAYVEFL-QSEAVQEALHLNESELHGRQLKVTVK---RTN 134
S GT+ V + T + G+PKG AYVEF ++ A Q L ++ + + G + V + R N
Sbjct: 796 SYGTIRDVRLVTYRSGKPKGLAYVEFAEETHASQAVLKMDGTVIDGNTISVAISNPPRRN 855
Query: 135 VPGMKQHRPRRPNPFMVYQSRG 156
+ RP P P VY +RG
Sbjct: 856 MDKPGSGRPLDPIPRQVYGARG 877
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 15/89 (16%)
Query: 66 DSRSVFVGN-------------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQE 112
D SVF+ N F+ CG ++++ G KGY Y++F +V E
Sbjct: 675 DDNSVFISNLAYTLEEPEAKLRTMFEPCGPISQIRPVFSTKGTFKGYCYIQFESVVSVSE 734
Query: 113 ALHLNESELHGRQLKVT--VKRTNVPGMK 139
AL L+ E+ R + V+ V + P K
Sbjct: 735 ALKLDRQEMENRPMFVSPCVDKNKNPDFK 763
>gi|395334547|gb|EJF66923.1| hypothetical protein DICSQDRAFT_95813 [Dichomitus squalens LYAD-421
SS1]
Length = 346
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 19/91 (20%)
Query: 70 VFVGN-----------QHFQSCG---TVNRVTIRTDKFGQP----KGYAYVEFLQSEAVQ 111
+FVGN QHF C TV +T + +P KG+A+VEF A+Q
Sbjct: 150 LFVGNLKYTTTKEAVEQHFSKCDPPPTVRLMTPKPSATSKPSVKSKGFAFVEFKHRNALQ 209
Query: 112 EALHLNESELHGRQLKVTVKRTNVPGMKQHR 142
+ L L++SEL GR++ V + G +HR
Sbjct: 210 QGLKLHQSELEGRKINVELT-AGGGGNSEHR 239
>gi|118398866|ref|XP_001031760.1| RNA binding protein [Tetrahymena thermophila]
gi|89286093|gb|EAR84097.1| RNA binding protein [Tetrahymena thermophila SB210]
Length = 451
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 13/82 (15%)
Query: 60 ANREEVD-SRSVFVGN-----------QHFQSCGTV-NRVTIRTDKFGQPKGYAYVEFLQ 106
AN + +D +R++FVGN HF+SCG + N IR K + KG+ YV F +
Sbjct: 174 ANEKILDYTRTIFVGNLHFKISEEQLRHHFESCGDILNVRVIRDPKTHEGKGFGYVFFKE 233
Query: 107 SEAVQEALHLNESELHGRQLKV 128
Q AL N ++L R+++V
Sbjct: 234 KTGFQNALEKNGTKLLEREIRV 255
>gi|358056844|dbj|GAA97194.1| hypothetical protein E5Q_03870 [Mixia osmundae IAM 14324]
Length = 267
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 18/88 (20%)
Query: 70 VFVGN-----------QHFQSCGTVNRVTIRTDKFG-------QPKGYAYVEFLQSEAVQ 111
VFVGN HF+ CG + V + T K + KGYA+VEF Q+ ++Q
Sbjct: 95 VFVGNLAYDVTADQVAAHFEPCGEIPSVRLGTSKAAAEGAQQVKSKGYAFVEFKQASSLQ 154
Query: 112 EALHLNESELHGRQLKVTVKRTNVPGMK 139
AL L+ S + + K+ V+ T G K
Sbjct: 155 NALRLHHSLIPPSKRKINVELTAGGGGK 182
>gi|2058693|gb|AAB53328.1| poly A binding protein [Rattus norvegicus]
Length = 85
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVG 73
EL+ +K R++EMEEEA L+++ +V +M P G SL + E D+RS++VG
Sbjct: 19 ELEAIKARVREMEEEADKLKELQNEVXKQMXMSPPPGNAGPVIMSLEEKMEADARSIYVG 78
Query: 74 NQHFQSC 80
N + +
Sbjct: 79 NVDYGAT 85
>gi|170033977|ref|XP_001844852.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167875097|gb|EDS38480.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 156
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
Query: 2 EGDDMDMIET---ENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSS 58
EG D D +E EN + D L ++ +E + L H + S ++P + G +
Sbjct: 16 EGCDDDWLECYEVENYEDVFD--WYELCDLNDEESDLVWEHPQQFFSCKSTKNPPSQGDT 73
Query: 59 LANREEVDSRSVFVGNQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL-HLN 117
L R S V F GT+ RV I D G KG+ +V F + +AL +N
Sbjct: 74 LFVRNLAKSVDVQQLTTLFAPFGTIARVNIVKDALGTSKGFGFVHFTNASDAGKALAKMN 133
Query: 118 ESELHGRQLKV 128
L GR+L V
Sbjct: 134 GHLLAGRKLHV 144
>gi|378727233|gb|EHY53692.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 381
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 67 SRSVFVGNQHFQSC---------GTVNRVTIRTD---KFGQPKGYAYVEFLQSEAVQEAL 114
S+++F+GN F+ G N + +R + GQP+G+A+ +F+ ++ EA+
Sbjct: 280 SKTLFIGNMSFEMTDRDLSNLFRGIRNVIDVRVAIDRRTGQPRGFAHADFIDVKSAMEAM 339
Query: 115 H-LNESELHGRQLKV 128
L+E E++GR+L+V
Sbjct: 340 KVLSEKEIYGRRLRV 354
>gi|15222009|ref|NP_175322.1| nucleolin [Arabidopsis thaliana]
gi|75334377|sp|Q9FVQ1.1|NUCL1_ARATH RecName: Full=Nucleolin 1; AltName: Full=Protein NUCLEOLIN LIKE 1;
Short=AtNUC-L1; AltName: Full=Protein PARALLEL 1;
Short=AtPARL1
gi|11094815|gb|AAG29744.1|AC084414_12 nuM1 protein, putative [Arabidopsis thaliana]
gi|28973759|gb|AAO64195.1| putative nucleolin [Arabidopsis thaliana]
gi|332194246|gb|AEE32367.1| nucleolin [Arabidopsis thaliana]
Length = 557
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 75 QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHG 123
+HF SCG + V++ D+ G KG AY+EF SE ++AL LN S++ G
Sbjct: 423 EHFSSCGEIKNVSVPIDRDTGNSKGIAYLEF--SEGKEKALELNGSDMGG 470
Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 22/91 (24%)
Query: 52 PAAGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGY 99
PAAGGS +++F N F+ G V V T++ G +G+
Sbjct: 291 PAAGGS----------KTLFAANLSFNIERADVENFFKEAGEVVDVRFSTNRDDGSFRGF 340
Query: 100 AYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
+VEF SE Q+AL + L GR++++ +
Sbjct: 341 GHVEFASSEEAQKALEFHGRPLLGREIRLDI 371
>gi|345326044|ref|XP_003430992.1| PREDICTED: putative RNA-binding protein 11-like [Ornithorhynchus
anatinus]
Length = 240
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAV 110
+EE D R+VFVGN + F G + +VTI DK G+PK + +V F +E+V
Sbjct: 5 QEEAD-RTVFVGNLESRVREEILYELFLQAGPLIKVTICKDKEGKPKSFGFVCFKHTESV 63
Query: 111 QEALH-LNESELHGRQLKV 128
A+ LN L+GR + V
Sbjct: 64 SYAIALLNGIRLYGRPINV 82
>gi|297743165|emb|CBI36032.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 75 QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL-HLNESELHGRQLKVTV 130
+HF SCG + + G KG+ +V F SE Q+AL LN + LHGR L + +
Sbjct: 327 EHFSSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALTTLNGTLLHGRSLYIAM 383
>gi|145499158|ref|XP_001435565.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402698|emb|CAK68168.1| unnamed protein product [Paramecium tetraurelia]
Length = 601
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Query: 66 DSRSVFVGNQHF-----------QSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL 114
+S + FVGN F + CG + V I D G+ +G+ YVE+ + + Q+ L
Sbjct: 445 ESTTCFVGNLSFYATEDSLYPIFEDCGKIKEVRIAKDAEGKSRGFGYVEYFDNASAQKGL 504
Query: 115 HLNESELHGRQLKV 128
+++ GR ++V
Sbjct: 505 SKTGTDVEGRAIRV 518
>gi|361124588|gb|EHK96669.1| putative RNA-binding protein sce3 [Glarea lozoyensis 74030]
Length = 549
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 77 FQSCGTVNRVTIRTDKFG-QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
F C +N V I DK +PKG+ Y EF E ++ AL LN+++ GR ++++V
Sbjct: 77 FTGCECIN-VRIIEDKMEMKPKGFGYAEFQTLEGLKSALTLNQTQFQGRNIRISV 130
>gi|327405345|ref|YP_004346183.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
gi|327320853|gb|AEA45345.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
Length = 224
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 77 FQSCGTVNRVTIRTDK-FGQPKGYAYVEFL-QSEAVQEALHLNESELHGRQLKV 128
F+ G VNRVTI D+ G+P+G+A+VE +SEA + L++S ++GR + V
Sbjct: 22 FEDYGKVNRVTIAKDRETGKPRGFAFVEMADESEADKAIEALDDSSVNGRNIAV 75
>gi|301119623|ref|XP_002907539.1| nucleolin, putative [Phytophthora infestans T30-4]
gi|262106051|gb|EEY64103.1| nucleolin, putative [Phytophthora infestans T30-4]
Length = 496
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 12/72 (16%)
Query: 69 SVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHL 116
SVF+GN + F CG + + TD+ G+ +G+ +V+F +EAV EA+ L
Sbjct: 337 SVFIGNLSWDVDENTVRETFGECGEILSCRLATDRETGEFRGFGHVDFASTEAVDEAVKL 396
Query: 117 NESELHGRQLKV 128
S ++GR ++V
Sbjct: 397 AGSYVNGRAIRV 408
Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 75 QHFQSCGTVN--RVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV-TVK 131
+HF CG V R+ ++ G+ G A+V F SEA + AL ++ + GR +K+ T +
Sbjct: 267 EHFAGCGEVTGARIPLQN---GRSSGTAFVTFATSEAAEAALAMDGQDFGGRWMKIRTAE 323
Query: 132 RTNV 135
+ N+
Sbjct: 324 KKNM 327
>gi|398410594|ref|XP_003856645.1| hypothetical protein MYCGRDRAFT_30158, partial [Zymoseptoria
tritici IPO323]
gi|339476530|gb|EGP91621.1| hypothetical protein MYCGRDRAFT_30158 [Zymoseptoria tritici IPO323]
Length = 298
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 21/101 (20%)
Query: 58 SLANREEVDS-RSVFVGN------------QHFQSCGTVNRV-TIRTDKFGQPKGYAYVE 103
S+A+ +VD+ R +F+GN + F CGTV V IR KG AYV+
Sbjct: 142 SVAHPAKVDNHRCIFIGNLGFPADVEEGLWRTFSKCGTVESVRVIRDSTTRVGKGIAYVQ 201
Query: 104 FLQSEAVQEALHLNESE---LHGRQLKVT----VKRTNVPG 137
F AV+ AL NE + + R+L+VT +KR PG
Sbjct: 202 FTDENAVEAALLYNEKKFPPMLPRKLRVTRAKAIKRNAKPG 242
>gi|225442420|ref|XP_002277538.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Vitis vinifera]
Length = 630
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 75 QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL-HLNESELHGRQLKVTV 130
+HF SCG + + G KG+ +V F SE Q+AL LN + LHGR L + +
Sbjct: 327 EHFSSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALTTLNGTLLHGRSLYIAM 383
>gi|452845187|gb|EME47120.1| hypothetical protein DOTSEDRAFT_145507 [Dothistroma septosporum
NZE10]
Length = 571
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 77 FQSCGTVNRVTIRTDKFG-QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
+ C +V V I DK +PKG+ YVEF E + +AL +ES GR +K++V
Sbjct: 125 LEGC-SVTTVRIMEDKIDRKPKGFGYVEFANPEGLTKALSKSESSFMGRNIKISV 178
>gi|328855457|gb|EGG04583.1| hypothetical protein MELLADRAFT_117005 [Melampsora larici-populina
98AG31]
Length = 667
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 11/72 (15%)
Query: 70 VFVGNQHFQSC--------GTVNRVTIR--TDK-FGQPKGYAYVEFLQSEAVQEALHLNE 118
FVGN ++ G + +IR TD G+PKGY Y+EF + EA+ EAL +
Sbjct: 94 AFVGNLSWEVSNADLEQFFGVTHITSIRMLTDSATGKPKGYGYIEFSKREALVEALDKSG 153
Query: 119 SELHGRQLKVTV 130
E+ GR ++V+V
Sbjct: 154 REVGGRVIRVSV 165
>gi|358374899|dbj|GAA91487.1| translation initiation factor 4B [Aspergillus kawachii IFO 4308]
Length = 496
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 77 FQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
F CG N V I DK + PKG+ YVEF + +++AL L+ + L GR ++ ++
Sbjct: 99 FADCGVTN-VRIVEDKLTKAPKGFGYVEFETVDGLKKALDLSGATLQGRSIRTSI 152
>gi|297790215|ref|XP_002863010.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297790235|ref|XP_002863020.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308809|gb|EFH39269.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308819|gb|EFH39279.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 66
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 27/33 (81%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASK 49
ELD+MK RLKEME+EA ALR+M KV EMA++
Sbjct: 24 ELDEMKKRLKEMEDEAAALREMQVKVEKEMAAQ 56
>gi|156058226|ref|XP_001595036.1| hypothetical protein SS1G_03124 [Sclerotinia sclerotiorum 1980]
gi|154700912|gb|EDO00651.1| hypothetical protein SS1G_03124 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 577
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 74 NQHFQSCGTVNRVTIRTDKFG-QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
N+ F C +N V I DK +PKG+ Y EF E ++ AL LN ++ GR ++++V
Sbjct: 96 NEFFVGCECIN-VRIIEDKMEMKPKGFGYAEFGSLEGLKSALTLNGTQFQGRNIRISV 152
>gi|170588491|ref|XP_001899007.1| RNA binding protein, identical [Brugia malayi]
gi|170588493|ref|XP_001899008.1| RNA binding protein, identical [Brugia malayi]
gi|1813684|gb|AAC47624.1| putative RNA binding protein [Brugia malayi]
gi|158593220|gb|EDP31815.1| RNA binding protein, identical [Brugia malayi]
gi|158593221|gb|EDP31816.1| RNA binding protein, identical [Brugia malayi]
gi|208429687|gb|ACI26725.1| putative RNA binding protein [Wuchereria bancrofti]
gi|402582983|gb|EJW76928.1| RNA-binding protein [Wuchereria bancrofti]
Length = 82
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 13/75 (17%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL 114
SRSVFVGN F G V V I D+ G+P+G+ + EF A ++A+
Sbjct: 2 SRSVFVGNLPYSAREEDVANFFWQVGPVTSVRIVLDRDTGRPRGFGFCEFETEAAAEQAV 61
Query: 115 -HLNESELHGRQLKV 128
+N +E GRQL+V
Sbjct: 62 GSMNHAEFMGRQLRV 76
>gi|45383684|ref|NP_989549.1| deleted in azoospermia-like [Gallus gallus]
gi|44887839|sp|Q804A9.1|DAZL_CHICK RecName: Full=Deleted in azoospermia-like; Short=DAZ-like protein
gi|28136293|gb|AAO26019.1| deleted azoospermia-like protein [Gallus gallus]
Length = 289
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 76 HFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV---TVKR 132
+F+ GTV V I TD+ G KGY +V FL + VQ+ + ++ +HG++LK+ K+
Sbjct: 55 YFEQYGTVKEVKIITDRTGVSKGYGFVSFLDNVDVQKIVE-SQISVHGKRLKLGPAIRKQ 113
Query: 133 TNVPGMKQHRPRRPNP 148
N+ Q RP NP
Sbjct: 114 QNLCSYMQPRPLAFNP 129
>gi|392564612|gb|EIW57790.1| hypothetical protein TRAVEDRAFT_38170 [Trametes versicolor
FP-101664 SS1]
Length = 483
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 9/71 (12%)
Query: 69 SVFVGNQHFQSC---------GTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNES 119
+ FVGN F G V I D+ +PKG+ YVEF +A+++AL S
Sbjct: 67 TAFVGNLTFDITETELEEFFGGGTKSVKIIKDRDEKPKGFGYVEFADLDALKDALAKTGS 126
Query: 120 ELHGRQLKVTV 130
L GR ++V+V
Sbjct: 127 PLAGRGVRVSV 137
>gi|341882525|gb|EGT38460.1| hypothetical protein CAEBREN_15135 [Caenorhabditis brenneri]
Length = 84
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 13/75 (17%)
Query: 69 SVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 115
SV+VGN F + G V V I D+ G+P+G+A+VEF Q A++
Sbjct: 7 SVYVGNAPYQTSEDEIGSFFSNVGHVTNVRIVCDRETGRPRGFAFVEFADEAGAQRAVNE 66
Query: 116 LNESELHGRQLKVTV 130
LN ++ +GRQL+V +
Sbjct: 67 LNGADFNGRQLRVNL 81
>gi|239607471|gb|EEQ84458.1| translation initiation factor 4B [Ajellomyces dermatitidis ER-3]
Length = 562
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 21/131 (16%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVD-----SRSVF 71
E+DD+ + + E R+M GN+M + G A REE+ +
Sbjct: 18 EMDDIPLPVPEPRSSYGGERRMMGGYGNDMGGFERDHRG---YAIREELPMPTQPPYTAH 74
Query: 72 VGNQHFQS-----------CGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNES 119
+GN F++ C N V + DK + PKG+ YVEF E +++AL +
Sbjct: 75 IGNLSFEATQGDISDLFAECQVTN-VRVVEDKITRAPKGFGYVEFATVEGLKKALSFQGT 133
Query: 120 ELHGRQLKVTV 130
L GR ++V+V
Sbjct: 134 PLQGRNIRVSV 144
>gi|346468341|gb|AEO34015.1| hypothetical protein [Amblyomma maculatum]
Length = 273
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 90 TDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
TDKF KGY YVEF ++++EAL + ++L GR L+V +
Sbjct: 69 TDKF---KGYCYVEFFDLDSLKEALEFDSADLQGRSLRVDI 106
>gi|326523691|dbj|BAJ93016.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 244
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 13/101 (12%)
Query: 63 EEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAV 110
EE+ +R ++VGN F + GTV R + DK+ G+ + + +V +E V
Sbjct: 64 EELATRKLYVGNIPRTVTNDELSAMFAAHGTVVRAEVMYDKYSGRSRRFGFVTMSTAEEV 123
Query: 111 QEALH-LNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFM 150
A+ LN++E+ GR++KV V + +P + P F+
Sbjct: 124 AAAIESLNDTEVGGRKIKVNVTESFLPNIDASAPESEPSFV 164
>gi|395333502|gb|EJF65879.1| polyadenylate binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 664
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 77 FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH-LNESELHGRQLKVT 129
F+ G V I+TD+ GQ +G+ +V F E Q+A+ L++SE HGR+L V+
Sbjct: 249 FEQFGNVTSAVIQTDEQGQSRGFGFVNFETHEEAQKAVETLHDSEYHGRKLFVS 302
>gi|50555552|ref|XP_505184.1| YALI0F08943p [Yarrowia lipolytica]
gi|49651054|emb|CAG77991.1| YALI0F08943p [Yarrowia lipolytica CLIB122]
Length = 369
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 12/81 (14%)
Query: 65 VDSRSVFVGNQHFQ-----------SCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEA 113
+D + +FVGN F SCG V+ V I+T+ G G+A V F E +A
Sbjct: 219 IDKQRLFVGNIPFATTWYELKAYLGSCGPVSHVEIQTNDVGDSLGFALVTFQDEETASKA 278
Query: 114 LHLNESEL-HGRQLKVTVKRT 133
+ L + ++ GR LKV R
Sbjct: 279 IELFDGKMFEGRALKVHYDRV 299
>gi|268581545|ref|XP_002645756.1| C. briggsae CBR-PAB-2 protein [Caenorhabditis briggsae]
Length = 685
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 77 FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL-HLNESELHGRQLKVTVKRT 133
F G + + TD G+PKG+ +V + +A Q+A+ LNE L G LK++V R
Sbjct: 253 FSKYGEITSAVVMTDADGKPKGFGFVAYADPDAAQKAVDDLNEKTLEGTDLKLSVCRA 310
>gi|402862668|ref|XP_003895669.1| PREDICTED: putative RNA-binding protein 11 [Papio anubis]
Length = 281
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 59 LANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQS 107
L +EE D R+VFVGN + F G + +VTI D+ G+PK + +V F
Sbjct: 2 LPAQEEAD-RTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHP 60
Query: 108 EAVQEALH-LNESELHGRQLKV 128
E+V A+ LN L+GR + V
Sbjct: 61 ESVSYAIALLNGIRLYGRPINV 82
>gi|239613287|gb|EEQ90274.1| RNA binding protein Rnp24 [Ajellomyces dermatitidis ER-3]
Length = 419
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 16/103 (15%)
Query: 28 MEEEATALRQMHAKVGNEMASK----QDPAAGGSSLANREEVDSRSVFVGN--------- 74
M E+ + R+ K N + +D AAG + + S+ VFVGN
Sbjct: 149 MSEQLISGRRALVKNANNFVGRPDKPKDEAAGNKTSNSTVHAPSKRVFVGNLGFDVTKEI 208
Query: 75 --QHFQSCGTVNRVTIRT-DKFGQPKGYAYVEFLQSEAVQEAL 114
+HF+ CG + + + T G+ KGYA+VEF +A + A+
Sbjct: 209 LEEHFKPCGVIESIQVATFQDTGKCKGYAWVEFESIDAAEAAM 251
>gi|405119389|gb|AFR94162.1| RNA-binding protein sce3 [Cryptococcus neoformans var. grubii H99]
Length = 502
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 69 SVFVGNQHFQS---------CGTVNRVTIR--TDKFGQPKGYAYVEFLQSEAVQEALHLN 117
+ F+GN F+ ++ V++R D G+PKG+ Y EF + +++AL +
Sbjct: 78 TAFIGNLSFEPDVEDEVRAFFNDLDPVSVRIVKDPQGKPKGFGYAEFKTQDGLKQALDRS 137
Query: 118 ESELHGRQLKVTVKRTNVPGMKQHRP 143
S+L GR ++V V P +H P
Sbjct: 138 MSQLQGRTIRVNV--AEAPSTSRHPP 161
>gi|410640984|ref|ZP_11351510.1| hypothetical protein GCHA_1746 [Glaciecola chathamensis S18K6]
gi|410139549|dbj|GAC09697.1| hypothetical protein GCHA_1746 [Glaciecola chathamensis S18K6]
Length = 151
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 13/95 (13%)
Query: 54 AGGSSLANREEVD-SRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYA 100
+G +++ +VD S++++VGN QHF+ G V+ V + D+ G+ KGY
Sbjct: 55 SGAATVTEEADVDNSKTLYVGNLPYRANEQAVQQHFEIQGQVHSVRLMKDRRTGKRKGYG 114
Query: 101 YVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV 135
+VE + A + +LN+SE R LKV + + V
Sbjct: 115 FVEMTAAGAEKAIQNLNDSEFQERTLKVRMAKDKV 149
>gi|358055630|dbj|GAA98461.1| hypothetical protein E5Q_05147 [Mixia osmundae IAM 14324]
Length = 1071
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 77 FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVP 136
F CG V + I+TD G +G A+V+F +AL LN +E R + V +
Sbjct: 851 FTPCGVVTAIRIQTDAKGLCRGAAFVDFEDVAGAAKALELNNTEFKKRHIAVVLASQR-- 908
Query: 137 GMKQHRP 143
G+K+ +P
Sbjct: 909 GLKEKQP 915
>gi|326921961|ref|XP_003207222.1| PREDICTED: deleted in azoospermia-like [Meleagris gallopavo]
Length = 291
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 76 HFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV---TVKR 132
+F+ GTV V I TD+ G KGY +V FL + VQ+ + ++ +HG++LK+ K+
Sbjct: 57 YFEQYGTVKEVKIITDRTGVSKGYGFVSFLDNVDVQKIVE-SQISVHGKRLKLGPAIRKQ 115
Query: 133 TNVPGMKQHRPRRPNP 148
N+ Q RP NP
Sbjct: 116 QNLCSYVQPRPLAFNP 131
>gi|198421867|ref|XP_002121273.1| PREDICTED: similar to squamous cell carcinoma antigen recognised by
T cells 3 [Ciona intestinalis]
Length = 930
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 13/97 (13%)
Query: 46 MASKQDPAAGGSSLANREEVDSRSVFVGNQH-------------FQSCGTVNRVTIRTDK 92
M+ Q A +S E D +VF+ N F CG V V + D
Sbjct: 657 MSEDQPAQATITSDERTAEGDKHTVFISNMSYSVQSPEEKLKIMFGCCGDVKSVRVVRDH 716
Query: 93 FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 129
G+ +G+ +V F Q E V++AL+L+ L GR L V+
Sbjct: 717 KGKMRGFGFVTFHQIEDVEKALNLDRQPLEGRPLYVS 753
>gi|449540824|gb|EMD31812.1| hypothetical protein CERSUDRAFT_88684 [Ceriporiopsis subvermispora
B]
Length = 292
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 40/145 (27%)
Query: 17 ELDDMKIRL-KEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN- 74
E+D + + K +E++ A+RQ A+ + AS+ S +FVGN
Sbjct: 108 EIDGRAVNIDKSIEKDKGAVRQKRAEAYGDKASEP----------------SSVLFVGNL 151
Query: 75 ----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH-LNESELH 122
+ F G + V + TD+ G+PKG+AYVEF EA ++A +E+
Sbjct: 152 SWDATEDTLWETFNEYGDIKSVRVPTDRETGKPKGFAYVEFSDIEASKKAFEGAAGAEVA 211
Query: 123 GRQLKVTVKRTNVPGMKQHRPRRPN 147
GR ++V +PR PN
Sbjct: 212 GRNIRVDF----------SQPRDPN 226
Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
Query: 53 AAGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYA 100
A G ++ A ++++FVG Q F CG V ++ D+ G+ +G+
Sbjct: 29 ADGNAAPAEEASDATKTIFVGKLSWNVDNDWLAQEFAECGEVVSARVQMDRNTGKSRGFG 88
Query: 101 YVEFLQSEAVQEALHLNESELHGRQLKV 128
YV F EAV A+ N E+ GR + +
Sbjct: 89 YVTFATVEAVDAAIAQNGKEIDGRAVNI 116
>gi|327357349|gb|EGE86206.1| RNA binding protein Rnp24 [Ajellomyces dermatitidis ATCC 18188]
Length = 419
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 16/103 (15%)
Query: 28 MEEEATALRQMHAKVGNEMASK----QDPAAGGSSLANREEVDSRSVFVGN--------- 74
M E+ + R+ K N + +D AAG + + S+ VFVGN
Sbjct: 149 MSEQLISGRRALVKNANNFVGRPDKPKDEAAGNKTSNSTVHAPSKRVFVGNLGFDVTKEI 208
Query: 75 --QHFQSCGTVNRVTIRT-DKFGQPKGYAYVEFLQSEAVQEAL 114
+HF+ CG + + + T G+ KGYA+VEF +A + A+
Sbjct: 209 LEEHFKPCGVIESIQVATFQDTGKCKGYAWVEFESIDAAEAAM 251
>gi|261188487|ref|XP_002620658.1| RNA binding protein Rnp24 [Ajellomyces dermatitidis SLH14081]
gi|239593142|gb|EEQ75723.1| RNA binding protein Rnp24 [Ajellomyces dermatitidis SLH14081]
Length = 419
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 16/103 (15%)
Query: 28 MEEEATALRQMHAKVGNEMASK----QDPAAGGSSLANREEVDSRSVFVGN--------- 74
M E+ + R+ K N + +D AAG + + S+ VFVGN
Sbjct: 149 MSEQLISGRRALVKNANNFVGRPDKPKDEAAGNKTSNSTVHAPSKRVFVGNLGFDVTKEI 208
Query: 75 --QHFQSCGTVNRVTIRT-DKFGQPKGYAYVEFLQSEAVQEAL 114
+HF+ CG + + + T G+ KGYA+VEF +A + A+
Sbjct: 209 LEEHFKPCGVIESIQVATFQDTGKCKGYAWVEFESIDAAEAAM 251
>gi|332304661|ref|YP_004432512.1| RNP-1 like RNA-binding protein [Glaciecola sp. 4H-3-7+YE-5]
gi|410645307|ref|ZP_11355773.1| hypothetical protein GAGA_1315 [Glaciecola agarilytica NO2]
gi|332171990|gb|AEE21244.1| RNP-1 like RNA-binding protein [Glaciecola sp. 4H-3-7+YE-5]
gi|410135079|dbj|GAC04172.1| hypothetical protein GAGA_1315 [Glaciecola agarilytica NO2]
Length = 151
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 13/95 (13%)
Query: 54 AGGSSLANREEVD-SRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYA 100
+G +++ +VD S++++VGN QHF+ G V+ V + D+ G+ KGY
Sbjct: 55 SGAATVTEEADVDNSKTLYVGNLPYRANEQAVQQHFELQGQVHSVRLMKDRRTGKRKGYG 114
Query: 101 YVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV 135
+VE + A + +LN+SE R LKV + + V
Sbjct: 115 FVEMTAAGAEKAIQNLNDSEFQERTLKVRMAKDKV 149
>gi|427787685|gb|JAA59294.1| Putative eukaryotic translation initiation factor 4h [Rhipicephalus
pulchellus]
Length = 270
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 90 TDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
TDKF KGY YVEF ++++EAL + ++L GR L+V +
Sbjct: 69 TDKF---KGYCYVEFFDLDSLKEALEFDSADLQGRSLRVDI 106
>gi|341882512|gb|EGT38447.1| hypothetical protein CAEBREN_12601 [Caenorhabditis brenneri]
Length = 84
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 13/73 (17%)
Query: 69 SVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 115
SV+VGN +F + G VN V I D+ G+P+G+A+VE+ Q A+
Sbjct: 7 SVYVGNVPYQGTEEDIGNYFSTVGVVNNVRIVYDRETGRPRGFAFVEYTDESGAQRAVQE 66
Query: 116 LNESELHGRQLKV 128
LN + +GR L+V
Sbjct: 67 LNGTSFNGRNLRV 79
>gi|317035924|ref|XP_001397207.2| translation initiation factor 4B [Aspergillus niger CBS 513.88]
Length = 478
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 77 FQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
F CG N V I DK + PKG+ YVEF + +++AL L+ + L GR ++ ++
Sbjct: 98 FADCGVTN-VRIVEDKLTKAPKGFGYVEFETVDGLKKALDLSGATLQGRAIRTSI 151
>gi|255952933|ref|XP_002567219.1| Pc21g01490 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588930|emb|CAP95046.1| Pc21g01490 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 495
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 74 NQHFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
++ F CG V V + DK + PKG+ YVEF E +++AL L+ S GR ++ +V
Sbjct: 97 SEFFSGCG-VTSVRLVEDKLTKAPKGFGYVEFETVEGLKKALDLSGSSFQGRSIRTSV 153
>gi|116624848|ref|YP_827004.1| RNP-1 like RNA-binding protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116228010|gb|ABJ86719.1| RNP-1 like RNA-binding protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 97
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 13/78 (16%)
Query: 68 RSVFVGNQHF-----------QSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH 115
+++FVGN F ++ G V+RV I TD+ GQP+G+ +VE ++A+
Sbjct: 2 KNIFVGNLSFGATEDTVRALFETHGKVDRVNICTDRDSGQPRGFGFVEMANDSEAEKAIS 61
Query: 116 -LNESELHGRQLKVTVKR 132
+N EL GR L V R
Sbjct: 62 AVNGKELDGRALNVNEAR 79
>gi|170032488|ref|XP_001844113.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872583|gb|EDS35966.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1130
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 63 EEVDSRSVFVGNQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELH 122
++++ S+F HF+ CG + + +RTD F AY+ F AV+ A+ N L
Sbjct: 99 QKINEESLF---DHFEDCGKITWLQVRTDDF------AYIGFEDKTAVRHAMAKNNIPLK 149
Query: 123 GRQLKVTVKRTNVPGMKQHRPRRPN 147
QLKV + NV M + PN
Sbjct: 150 NSQLKVQILTRNVDIMIVNLDTLPN 174
>gi|189500331|ref|YP_001959801.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides BS1]
gi|189495772|gb|ACE04320.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides BS1]
Length = 89
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 75 QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEF-LQSEAVQEALHLNESELHGRQLKVTVKR 132
+ F G V+ I +DKF G+ KG+ +VE +EA Q LN+++L+GR +KV R
Sbjct: 19 EAFGEFGEVSSANIISDKFTGRSKGFGFVEMPNDAEANQAIDALNDTDLNGRSIKVNQAR 78
Query: 133 TNVPGMKQHRPRRP 146
++ RP RP
Sbjct: 79 P-----REERPSRP 87
>gi|356535448|ref|XP_003536257.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Glycine max]
Length = 471
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 56 GSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVE 103
G + N + ++ +FVG Q+F+S G V V + D+ G+P+G+ ++
Sbjct: 100 GMNSGNGGNIRTKKIFVGGLPPTLTEEKFRQYFESYGNVTDVVVMYDQNTGRPRGFGFIS 159
Query: 104 FLQSEAVQEALHLNESELHGRQLKV 128
F +AV LH + +L+G+Q++V
Sbjct: 160 FDTEDAVDRVLHKSFHDLNGKQVEV 184
>gi|134082739|emb|CAK42631.1| unnamed protein product [Aspergillus niger]
Length = 489
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 77 FQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
F CG N V I DK + PKG+ YVEF + +++AL L+ + L GR ++ ++
Sbjct: 99 FADCGVTN-VRIVEDKLTKAPKGFGYVEFETVDGLKKALDLSGATLQGRAIRTSI 152
>gi|242096254|ref|XP_002438617.1| hypothetical protein SORBIDRAFT_10g022900 [Sorghum bicolor]
gi|241916840|gb|EER89984.1| hypothetical protein SORBIDRAFT_10g022900 [Sorghum bicolor]
Length = 631
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 19/106 (17%)
Query: 46 MASKQDPAAGGSSLAN------REEVDSRSVFVGNQHFQSCGTVNRVTIRTDKFGQPKGY 99
M S +DP+ S AN +DS++++ + F S GT+ + TD GQ KGY
Sbjct: 111 MFSNRDPSLRKSGRANLFVKNLEPSIDSKNLY---EMFSSFGTILSCKVATDSAGQSKGY 167
Query: 100 AYVEFLQSEAVQEALH------LNESE----LHGRQLKVTVKRTNV 135
+V++ E+ Q+A++ N+ E LH R+ VK TNV
Sbjct: 168 GFVQYETEESAQDAINRLNGMLANDREMFVGLHMRRRNREVKFTNV 213
>gi|17508587|ref|NP_493023.1| Protein R09B3.3 [Caenorhabditis elegans]
gi|3879016|emb|CAB03237.1| Protein R09B3.3 [Caenorhabditis elegans]
Length = 85
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 13/78 (16%)
Query: 69 SVFVGNQHFQS-----------CGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL-H 115
SV+VGN FQ+ G V+ V I D+ G+P+G+A+VEF + A Q A+
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 116 LNESELHGRQLKVTVKRT 133
N + +GR L+V + +
Sbjct: 65 FNGVDFNGRALRVNLAQN 82
>gi|242003014|ref|XP_002422579.1| squamous cell carcinoma antigen, putative [Pediculus humanus
corporis]
gi|212505369|gb|EEB09841.1| squamous cell carcinoma antigen, putative [Pediculus humanus
corporis]
Length = 858
Score = 44.3 bits (103), Expect = 0.023, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 44 NEMASKQDPAAGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK 92
+++ + A G ++ ++ D R+VFV N + F CG + + + D
Sbjct: 578 DKLLRGESKTAHGETVVHQSSKDHRTVFVSNLDFTTEEDVIRETFSCCGEITDLRLVRDY 637
Query: 93 FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 129
G+ KGY YVEF +S AL + ++GR + V+
Sbjct: 638 KGRSKGYCYVEFEKSVEAARALKKDRELINGRPMFVS 674
>gi|212530026|ref|XP_002145170.1| translation initiation factor 4B [Talaromyces marneffei ATCC 18224]
gi|210074568|gb|EEA28655.1| translation initiation factor 4B [Talaromyces marneffei ATCC 18224]
Length = 492
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 74 NQHFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
+Q F C N V I DK + PKG+ YVEF E +++AL + + L GR ++V++
Sbjct: 90 SQLFADCEVTN-VRIVEDKLNRSPKGFGYVEFASVEGLKKALTFSGTTLQGRAIRVSI 146
>gi|350636524|gb|EHA24884.1| hypothetical protein ASPNIDRAFT_123074 [Aspergillus niger ATCC
1015]
Length = 437
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 77 FQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
F CG N V I DK + PKG+ YVEF + +++AL L+ + L GR ++ ++
Sbjct: 39 FADCGVTN-VRIVEDKLTKAPKGFGYVEFETVDGLKKALDLSGATLQGRAIRTSI 92
>gi|290996979|ref|XP_002681059.1| RRM domain-containing protein [Naegleria gruberi]
gi|284094682|gb|EFC48315.1| RRM domain-containing protein [Naegleria gruberi]
Length = 285
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 81 GTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
G++ RV I TD+ G+ +GY +VEF + EA Q+ + L E+ GR++++
Sbjct: 75 GSIVRVNIPTDERGRSRGYGFVEFDEVEAAQKVVDLKAMEMDGREVQL 122
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 12/124 (9%)
Query: 16 VELDDMK-----IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSV 70
VE D+++ + LK ME + ++ +K +E + + G+ + EE D R +
Sbjct: 96 VEFDEVEAAQKVVDLKAMEMDGREVQLQQSKARDEFSGRTTQVFVGNLPESAEEQDIREL 155
Query: 71 FVGNQHFQSCGTVNRVTIRTDKFGQPK-GYAYVEFLQSEAVQEALHLNESELHGRQLKVT 129
F ++CG + V + DK + K G+A+V+F S +V+ AL + SE G ++V
Sbjct: 156 F------ETCGEIEEVRMPKDKDTEKKKGFAFVQFRDSSSVKAALEKDGSEFKGVSIRVN 209
Query: 130 VKRT 133
+++
Sbjct: 210 EEKS 213
>gi|242761549|ref|XP_002340201.1| translation initiation factor 4B [Talaromyces stipitatus ATCC
10500]
gi|218723397|gb|EED22814.1| translation initiation factor 4B [Talaromyces stipitatus ATCC
10500]
Length = 486
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 74 NQHFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
+Q F C N V I DK + PKG+ YVEF E +++AL + + L GR ++V++
Sbjct: 90 SQLFADCEVTN-VRIVEDKLNRSPKGFGYVEFATVEGLKKALTFSGTTLQGRAIRVSI 146
>gi|452001527|gb|EMD93986.1| hypothetical protein COCHEDRAFT_1201816 [Cochliobolus
heterostrophus C5]
Length = 560
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 76 HFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESE---LHGRQLKVTVK 131
H CGT+ V +R K KG+AYV+F V+ AL LNE + R+L++T
Sbjct: 396 HLSKCGTIESVRVVRDAKTRVGKGFAYVQFTDENGVEAALQLNEKNFPPMLPRKLRITRC 455
Query: 132 RTNVPGMKQHRPRRPNP 148
+ K+ +PR P P
Sbjct: 456 KAE---KKKDKPRGPPP 469
>gi|324514401|gb|ADY45855.1| Cleavage stimulation factor subunit 2 [Ascaris suum]
Length = 324
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 46 MASKQDPAAGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-F 93
MA + A + + + +RSVFVGN Q F G V + + D+
Sbjct: 1 MAFRDREGAASKTSTSSADRSARSVFVGNISYEVGEEQLKQVFSQVGPVVHLRLVHDRET 60
Query: 94 GQPKGYAYVEFLQSEAVQEAL-HLNESELHGRQLKV 128
G+PKGY + E+ + + A+ +LN EL+GRQL+V
Sbjct: 61 GKPKGYGFCEYNDPQTAESAIRNLNGYELNGRQLRV 96
>gi|408674060|ref|YP_006873808.1| RNP-1 like RNA-binding protein [Emticicia oligotrophica DSM 17448]
gi|387855684|gb|AFK03781.1| RNP-1 like RNA-binding protein [Emticicia oligotrophica DSM 17448]
Length = 109
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 75 QHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALH-LNESELHGRQLKVT 129
Q+F+ G V+ V I TDKF G+ KG+A+VE A Q+A++ LN S++ GR V
Sbjct: 19 QYFEEYGEVSSVKIITDKFTGRSKGFAFVEMPDDAAAQKAINALNGSDIGGRSAVVN 75
>gi|213401557|ref|XP_002171551.1| gar2 [Schizosaccharomyces japonicus yFS275]
gi|211999598|gb|EEB05258.1| gar2 [Schizosaccharomyces japonicus yFS275]
Length = 449
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 14/91 (15%)
Query: 57 SSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEF 104
S+ +++ S +VF+GN F SCG + V + TD G+PKG+ YV F
Sbjct: 299 SNFGDKQSPPSDTVFIGNLSFNATEDDVRNAFSSCGEIQSVRLPTDMNSGRPKGFGYVTF 358
Query: 105 LQSEAVQEALHLNESELHGR--QLKVTVKRT 133
+A ++ + +N + GR +L + RT
Sbjct: 359 DSIDAAKQCVEMNGHFIAGRPCRLDFSTPRT 389
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 17/100 (17%)
Query: 60 ANREEVDSRSVFVG-----------NQHFQSCGTV-NRVTIRTDKFGQPKGYAYVEFLQS 107
A E +S +VFVG + F+ GTV N I + G+ KG+ YV+F
Sbjct: 198 AKSESGESCTVFVGRLSWNVDDEWLGKEFEEYGTVVNARVIMDGQSGRSKGFGYVDFDSP 257
Query: 108 EAVQEALHLN-ESELHGRQLKVTVKR----TNVPGMKQHR 142
EA + A+ +N + E+ GR + + + N G Q R
Sbjct: 258 EAAKAAVAVNGQKEIDGRMVNLDISTPRPAQNNNGFAQQR 297
>gi|308504790|ref|XP_003114578.1| hypothetical protein CRE_28336 [Caenorhabditis remanei]
gi|308258760|gb|EFP02713.1| hypothetical protein CRE_28336 [Caenorhabditis remanei]
Length = 84
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 13/75 (17%)
Query: 69 SVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL-H 115
SV+VGN +F + G V V I D+ G+P+G+A+VEF Q A
Sbjct: 7 SVYVGNATYQTTEQELGDYFSTVGQVTNVRIVCDRETGRPRGFAFVEFADEAGAQRACDQ 66
Query: 116 LNESELHGRQLKVTV 130
LN + +GRQL+V +
Sbjct: 67 LNGVDFNGRQLRVNL 81
>gi|185177638|pdb|2YWK|A Chain A, Crystal Structure Of Rrm-Domain Derived From Human
Putative Rna-Binding Protein 11
Length = 95
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 13/80 (16%)
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAV 110
+EE D R+VFVGN + F G + +VTI D+ G+PK + +V F E+V
Sbjct: 12 QEEAD-RTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESV 70
Query: 111 QEALH-LNESELHGRQLKVT 129
A+ LN L+GR + V+
Sbjct: 71 SYAIALLNGIRLYGRPINVS 90
>gi|189204099|ref|XP_001938385.1| nucleolar protein 12 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187985484|gb|EDU50972.1| nucleolar protein 12 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 562
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 76 HFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESE---LHGRQLKVTVK 131
F CG V V +R K KG+AYV+F+ V+ AL LNE + + R+L++T
Sbjct: 399 QFAKCGKVESVRVVRDAKTRVGKGFAYVQFVDENGVEAALQLNEQKFPPMLPRKLRITRC 458
Query: 132 RTNVPGMKQHRPRRPNPFMVYQSRG 156
+ K+ +PR P P RG
Sbjct: 459 KAE---KKKDKPRGPPPSSSKSQRG 480
>gi|119195333|ref|XP_001248270.1| hypothetical protein CIMG_02041 [Coccidioides immitis RS]
gi|392862497|gb|EAS36853.2| RNA binding protein Rnp24 [Coccidioides immitis RS]
Length = 391
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 16/107 (14%)
Query: 24 RLKEMEEEATALRQMHAKVGNEMASKQDPA--AGGSSLANREEVD--SRSVFVGN----- 74
R + E+ A R + K N A + D GG+S+ ++ + S+ +FVGN
Sbjct: 137 RAIALSEQLLAGRAVLIKDANNFAGRPDKPRDDGGTSMGSKTSANPPSKKIFVGNLAFDI 196
Query: 75 ------QHFQSCGTVNRVTIRT-DKFGQPKGYAYVEFLQSEAVQEAL 114
+H++ CG ++ V I T + G+ KGY +VEF + E+ A+
Sbjct: 197 TKEMLEEHYRPCGGISHVHIATFEDSGKCKGYGWVEFEELESAAAAV 243
>gi|401423018|ref|XP_003875996.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492236|emb|CBZ27510.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 265
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 18/100 (18%)
Query: 63 EEVDSRSVFVGN----------------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFL 105
++ DSRS+F+GN Q F CG + T+ D+ G+ KG AY+EF
Sbjct: 129 KDTDSRSIFIGNLPRGTDGTTTTPEELVQFFADCGNILNCTVLKDRATGELKGTAYIEFA 188
Query: 106 QSEAVQEALHL-NESELHGRQLKVTVKRTNVPGMKQHRPR 144
A+ +A+ N + G + V V + + ++ PR
Sbjct: 189 DYTAMGKAIDTKNNANFKGSTIIVCVSTSPLFYLQFSLPR 228
>gi|170574206|ref|XP_001892710.1| cleavage stimulation factor [Brugia malayi]
gi|158601568|gb|EDP38456.1| cleavage stimulation factor, putative [Brugia malayi]
Length = 334
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 13/75 (17%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL 114
+RSVFVGN Q F G V + + D+ G+PKGY + E+ S+ + A+
Sbjct: 25 ARSVFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKPKGYGFCEYNDSQTAESAI 84
Query: 115 -HLNESELHGRQLKV 128
+LN EL+GR L+V
Sbjct: 85 RNLNGFELNGRPLRV 99
>gi|297836410|ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata]
gi|297331927|gb|EFH62346.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata]
Length = 557
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 14/88 (15%)
Query: 67 SRSVFVGNQH-----------FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
+R ++VGN H F+ G+V V + D+ G KG+ +V+F + E + AL+
Sbjct: 284 ARRLYVGNLHINMSEDDLRKVFEPFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALN 343
Query: 116 LN-ESELHGRQLKVT--VKRTNVPGMKQ 140
LN + E+ GR +KV+ +T VP Q
Sbjct: 344 LNGQLEIAGRAIKVSAVTDQTEVPEAGQ 371
>gi|358410117|ref|XP_003581718.1| PREDICTED: putative RNA-binding protein 11-like [Bos taurus]
gi|296491598|tpg|DAA33639.1| TPA: RNA binding motif protein 11 [Bos taurus]
Length = 246
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 59 LANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQS 107
L +EE D R+VFVGN + F G + +VTI D+ G+PK + +V F
Sbjct: 2 LPAQEEAD-RTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHP 60
Query: 108 EAVQEALH-LNESELHGRQLKV 128
E+V A+ LN L+GR + V
Sbjct: 61 ESVSYAIALLNGIRLYGRPINV 82
>gi|154338451|ref|XP_001565450.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062499|emb|CAM42361.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 240
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 19/90 (21%)
Query: 63 EEVDSRSVFVGN-----------------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEF 104
++ DSRS+F+GN Q F CG++ T+ D+ G+ KG AY+EF
Sbjct: 119 KDTDSRSIFIGNLPRGADGTPATTPEELVQFFADCGSILNCTVLKDRATGELKGTAYIEF 178
Query: 105 LQSEAVQEALHL-NESELHGRQLKVTVKRT 133
A+ +A+ N + G + V V +
Sbjct: 179 ADHTAMGKAIDTKNNASFKGSTIIVCVSTS 208
>gi|407408043|gb|EKF31617.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 276
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 70 VFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHL-N 117
+FVGN HF+ G V + D+ G+PKG A V + +E Q A+ + N
Sbjct: 28 LFVGNLPFQTPWQHVKDHFRKAGKVRYTDLIADRMGRPKGSALVTMVTAEGAQRAIRMYN 87
Query: 118 ESELHGRQLKV 128
E++ GR+L V
Sbjct: 88 ETDFEGRRLIV 98
>gi|260841409|ref|XP_002613908.1| hypothetical protein BRAFLDRAFT_160958 [Branchiostoma floridae]
gi|229299298|gb|EEN69917.1| hypothetical protein BRAFLDRAFT_160958 [Branchiostoma floridae]
Length = 152
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 10/73 (13%)
Query: 66 DSRSVFVGNQHFQSCGT------VNRVTIRTDKF---GQPKGYAYVEFLQSEAVQEALH- 115
D+R++F+ N + S + V +R F G+PKG+ YV+F EA +EA+
Sbjct: 1 DARTLFLRNLSYDSTKESIMEVFTDAVDVRIPIFKDSGRPKGFGYVDFESEEAAKEAMDS 60
Query: 116 LNESELHGRQLKV 128
+N+SEL GR + V
Sbjct: 61 MNQSELDGRTINV 73
>gi|94966923|ref|NP_001035657.1| putative RNA-binding protein 11 [Bos taurus]
gi|74267635|gb|AAI02761.1| RNA binding motif protein 11 [Bos taurus]
Length = 246
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 59 LANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQS 107
L +EE D R+VFVGN + F G + +VTI D+ G+PK + +V F
Sbjct: 2 LPAQEEAD-RTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHP 60
Query: 108 EAVQEALH-LNESELHGRQLKV 128
E+V A+ LN L+GR + V
Sbjct: 61 ESVSYAIALLNGIRLYGRPINV 82
>gi|353232427|emb|CCD79782.1| elav (embryonic lethal, abnormal vision,drosophila)-like protein
[Schistosoma mansoni]
Length = 535
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 77 FQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALH-LNESELHGRQLKVTVKRTN 134
F +CG + + DK G+ GYA+V++ S Q+A+H LN L + +KV++ R N
Sbjct: 10 FSTCGQIESCKLIRDKLTGESLGYAFVKYSHSNEAQQAIHKLNGLSLQNKTIKVSLARPN 69
Query: 135 VPGMK 139
+K
Sbjct: 70 CESIK 74
>gi|66810518|ref|XP_638966.1| hypothetical protein DDB_G0283687 [Dictyostelium discoideum AX4]
gi|60467589|gb|EAL65610.1| hypothetical protein DDB_G0283687 [Dictyostelium discoideum AX4]
Length = 727
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 12/78 (15%)
Query: 63 EEVDSRSVFVG-----------NQHFQSCGTVNRVTIRTDKFGQP-KGYAYVEFLQSEAV 110
EE D R+VFV + F GTV V + TDK + KG YVEF Q E V
Sbjct: 261 EESDQRTVFVSKLSQNIVEKDLSDLFSQAGTVLNVRLITDKVTKRMKGVGYVEFSQKEMV 320
Query: 111 QEALHLNESELHGRQLKV 128
+A+ L+ S L G+Q+ V
Sbjct: 321 DKAIALSGSVLDGQQILV 338
>gi|407860794|gb|EKG07505.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 276
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 70 VFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHL-N 117
+FVGN HF+ G V + D+ G+PKG A V + +E Q A+ + N
Sbjct: 28 LFVGNLPFQTPWQHVKDHFRKAGKVRYTDLIADRMGRPKGSALVTMVTAEGAQRAIRMYN 87
Query: 118 ESELHGRQLKV 128
E++ GR+L V
Sbjct: 88 ETDFEGRRLIV 98
>gi|256075727|ref|XP_002574168.1| elav (embryonic lethal abnormal vision drosophila)-like protein
[Schistosoma mansoni]
Length = 517
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 77 FQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALH-LNESELHGRQLKVTVKRTN 134
F +CG + + DK G+ GYA+V++ S Q+A+H LN L + +KV++ R N
Sbjct: 10 FSTCGQIESCKLIRDKLTGESLGYAFVKYSHSNEAQQAIHKLNGLSLQNKTIKVSLARPN 69
Query: 135 VPGMK 139
+K
Sbjct: 70 CESIK 74
>gi|237836905|ref|XP_002367750.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|211965414|gb|EEB00610.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221482025|gb|EEE20391.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Toxoplasma
gondii GT1]
gi|221505100|gb|EEE30754.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 274
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 13/88 (14%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL-H 115
R++FVG + F+ G++ RV + D+ G+P+GY ++EF ++EA +
Sbjct: 98 RTLFVGGISYDTTEKKLKREFEQYGSIKRVRLIYDRNGKPRGYGFIEFENDRDMKEAYKN 157
Query: 116 LNESELHGRQLKVTVKRT-NVPGMKQHR 142
+ ++ GR++ V V+R VPG R
Sbjct: 158 ADGKKIDGRRVLVDVERARTVPGWLPRR 185
>gi|340384626|ref|XP_003390812.1| PREDICTED: nucleolar protein 12-like, partial [Amphimedon
queenslandica]
Length = 224
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 13/73 (17%)
Query: 69 SVFVGN-----------QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHL 116
SVFVGN + F+SCG ++ + I D + G KG+AYV+F S +V A
Sbjct: 87 SVFVGNVPFGADEEKLRKVFESCGPIDGIRIIKDTRTGINKGFAYVKFKDSSSVLFACKK 146
Query: 117 NES-ELHGRQLKV 128
NE E+ GR+L+V
Sbjct: 147 NERIEVEGRKLRV 159
>gi|389751225|gb|EIM92298.1| hypothetical protein STEHIDRAFT_89201 [Stereum hirsutum FP-91666
SS1]
Length = 340
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 23/115 (20%)
Query: 37 QMHAKVGNEMASKQDPAAGGSSLANREEVDSRS-----VFVGN-----------QHFQSC 80
++ K G + A+ A GS +E+ ++ +FVGN QHF C
Sbjct: 121 EVEGKEGKKAANADGEGAAGSEDRTKEDAKDKTKQRFILFVGNLKYTTSKEAIQQHFAIC 180
Query: 81 G---TVNRVTIRTDKFGQP----KGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
T+ ++ + + G P KG A++EF A+Q+AL L+ SEL R++ V
Sbjct: 181 DPPPTIRLLSPKQTRPGAPTAKSKGCAFLEFTSRNALQQALKLHHSELESRKINV 235
>gi|410078654|ref|XP_003956908.1| hypothetical protein KAFR_0D01270 [Kazachstania africana CBS 2517]
gi|372463493|emb|CCF57773.1| hypothetical protein KAFR_0D01270 [Kazachstania africana CBS 2517]
Length = 443
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 12/62 (19%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
RS+FVGN HF CG + V IR K KG+AYV+F +V +AL
Sbjct: 269 RSIFVGNLDFEEDEESLWNHFSKCGEIEYVRIIRDSKTNLGKGFAYVQFSDLSSVNKALL 328
Query: 116 LN 117
LN
Sbjct: 329 LN 330
>gi|326427350|gb|EGD72920.1| hypothetical protein PTSG_04652 [Salpingoeca sp. ATCC 50818]
Length = 976
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 77 FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQS-EAVQEALHLNESELHGRQLKVTV 130
F+ G V V + T G+P+G+AYVEF S +A ++L+++E GRQL+V +
Sbjct: 803 FEQYGAVKEVRMVTTLAGKPRGFAYVEFEASRDAATAIMNLDKAEFKGRQLQVAL 857
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQE 112
E R+VFV N F+ CG + + + GQ KG+AY+EF + ++
Sbjct: 686 EAAQRTVFVKNLDFAVDEDMLQMFFKDCGAIRDIRLVRKPSGQSKGFAYIEFEEKSSLAF 745
Query: 113 ALHLNESELHGRQLKV 128
AL + ++GR + V
Sbjct: 746 ALSKDRQFMNGRPVLV 761
>gi|71417144|ref|XP_810487.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70875023|gb|EAN88636.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 276
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 70 VFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHL-N 117
+FVGN HF+ G V + D+ G+PKG A V + +E Q A+ + N
Sbjct: 28 LFVGNLPFQTPWQHVKDHFRKAGKVRYTDLIADRMGRPKGSALVTMVTAEGAQRAIRMYN 87
Query: 118 ESELHGRQLKV 128
E++ GR+L V
Sbjct: 88 ETDFEGRRLIV 98
>gi|71413449|ref|XP_808862.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70873155|gb|EAN87011.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 276
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 70 VFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHL-N 117
+FVGN HF+ G V + D+ G+PKG A V + +E Q A+ + N
Sbjct: 28 LFVGNLPFQTPWQHVKDHFRKAGKVRYTDLIADRMGRPKGSALVTMVTAEGAQRAIRMYN 87
Query: 118 ESELHGRQLKV 128
E++ GR+L V
Sbjct: 88 ETDFEGRRLIV 98
>gi|392574824|gb|EIW67959.1| hypothetical protein TREMEDRAFT_74367 [Tremella mesenterica DSM
1558]
Length = 563
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 63 EEVDSRSVFVGNQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELH 122
EE D R+ F Q G V I + GQP+GYA+V+F ++ +++AL N +
Sbjct: 97 EEDDLRAFFT---ELQPTG----VRISKNAEGQPRGYAHVDFPTADKLRDALAKNSQQFS 149
Query: 123 GRQLKVTV 130
GR ++++V
Sbjct: 150 GRSIRISV 157
>gi|357122209|ref|XP_003562808.1| PREDICTED: uncharacterized protein LOC100836006 [Brachypodium
distachyon]
Length = 472
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 16/96 (16%)
Query: 45 EMASKQDPAAGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF 93
+ASK + GSS+ + V +R +FVG ++F+ G + V + D
Sbjct: 87 SIASKNN----GSSIGSPGPVRTRKIFVGGLASNVTEVEFRRYFEQFGMITDVVVMYDHN 142
Query: 94 GQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
Q P+G+ ++ + +AV +ALH N EL+G+ ++V
Sbjct: 143 TQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEV 178
>gi|440893645|gb|ELR46339.1| Putative RNA-binding protein 11 [Bos grunniens mutus]
Length = 246
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 59 LANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQS 107
L +EE D R+VFVGN + F G + +VTI D+ G+PK + +V F
Sbjct: 2 LPAQEEAD-RTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHP 60
Query: 108 EAVQEALH-LNESELHGRQLKV 128
E+V A+ LN L+GR + V
Sbjct: 61 ESVSYAIALLNGIRLYGRPINV 82
>gi|402086166|gb|EJT81064.1| translation initiation factor 4B [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 557
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 32/54 (59%)
Query: 77 FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
F C V+ + + G+PKG+ YVEF ++ +++AL L+ + GR ++V +
Sbjct: 71 FAECEIVSVRIVEDREQGRPKGFGYVEFASADGLKQALTLDGASFQGRSIRVRI 124
>gi|326525423|dbj|BAJ88758.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 471
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 16/96 (16%)
Query: 45 EMASKQDPAAGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF 93
+ASK + GSS+ + V +R +FVG ++F+ G + V + D
Sbjct: 87 SIASKNN----GSSIGSPGPVRTRKIFVGGLASNVTEVEFRRYFEQFGMITDVVVMYDHN 142
Query: 94 GQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
Q P+G+ ++ + +AV +ALH N EL+G+ ++V
Sbjct: 143 TQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEV 178
>gi|303310583|ref|XP_003065303.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240104965|gb|EER23158.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 391
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 16/103 (15%)
Query: 28 MEEEATALRQMHAKVGNEMASKQDPA--AGGSSLANREEVD--SRSVFVGN--------- 74
+ E+ A R + K N A + D GG+S+ ++ + S+ +FVGN
Sbjct: 141 LSEQLLAGRAVLIKDANNFAGRPDKPRDDGGTSMGSKTSANPPSKKIFVGNLAFDITKEM 200
Query: 75 --QHFQSCGTVNRVTIRT-DKFGQPKGYAYVEFLQSEAVQEAL 114
+H++ CG ++ V I T + G+ KGY +VEF + E+ A+
Sbjct: 201 LEEHYRPCGGISHVHIATFEDSGKCKGYGWVEFEELESAAAAV 243
>gi|66819971|ref|XP_643642.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60471524|gb|EAL69480.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 299
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 75 QHFQSCGTVNRVTIRT-DKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+ F CG+++RV++ + G+ KG+A+V F +AV++A+ L ++ GR+++V
Sbjct: 179 EFFSKCGSISRVSLPVYEDSGRLKGFAFVSFDSEDAVEKAIALTGTKFEGREIQV 233
>gi|403417497|emb|CCM04197.1| predicted protein [Fibroporia radiculosa]
Length = 257
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 18/79 (22%)
Query: 70 VFVGNQ-----------HFQSCG---TVNRVTIRTDKFGQP----KGYAYVEFLQSEAVQ 111
+F+GN HF +C TV +T + G+P KG A++EF A+Q
Sbjct: 139 LFIGNLKYTTTQKAIQIHFAACDPPPTVRLITPKAPSSGKPVTKSKGCAFLEFSSRNALQ 198
Query: 112 EALHLNESELHGRQLKVTV 130
+AL L++SEL GR + V +
Sbjct: 199 QALKLHQSELEGRMINVEL 217
>gi|320034863|gb|EFW16806.1| RNA binding protein Rnp24 [Coccidioides posadasii str. Silveira]
Length = 391
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 16/103 (15%)
Query: 28 MEEEATALRQMHAKVGNEMASKQDPA--AGGSSLANREEVD--SRSVFVGN--------- 74
+ E+ A R + K N A + D GG+S+ ++ + S+ +FVGN
Sbjct: 141 LSEQLLAGRAVLIKDANNFAGRPDKPRDDGGTSMGSKTSANPPSKKIFVGNLAFDITKEM 200
Query: 75 --QHFQSCGTVNRVTIRT-DKFGQPKGYAYVEFLQSEAVQEAL 114
+H++ CG ++ V I T + G+ KGY +VEF + E+ A+
Sbjct: 201 LEEHYRPCGGISHVHIATFEDSGKCKGYGWVEFEELESAAAAV 243
>gi|224013888|ref|XP_002296608.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968960|gb|EED87304.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 471
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 77 FQSCGTVNRVTIRT-DKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
F+ CG + +T T D + KGY V F +AV +A+ +N SELHGR L +
Sbjct: 360 FKDCGKIMEITFPTFDDSDRSKGYCGVLFTSPKAVAKAVEMNGSELHGRWLSI 412
>gi|326470511|gb|EGD94520.1| pre-mRNA splicing factor (Prp24) [Trichophyton tonsurans CBS 112818]
Length = 1279
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 44/100 (44%), Gaps = 6/100 (6%)
Query: 77 FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVP 136
F + G V V I T G+ +G+ +V F + AL +NE GR+L V + TN
Sbjct: 982 FTAYGDVESVRIPTKVNGETRGFGFVTFATKDQSTAALAMNEKTFKGRELNVRLS-TNTG 1040
Query: 137 GMKQHR---PRRPNPFMVYQSRGAII--PPFLYSPYGYGK 171
+ H R +P QS GA PP P G GK
Sbjct: 1041 AKRHHNTIVSRSESPATNAQSNGASTASPPPSSLPDGQGK 1080
>gi|119492303|ref|ZP_01623650.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119453188|gb|EAW34355.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 101
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 15/78 (19%)
Query: 69 SVFVGNQH-----------FQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL-- 114
S++VGN F GTV RV+I TD+ G+P+G+A+VE +Q E+ ++A
Sbjct: 2 SIYVGNLSYEVTEEDLKSVFAEYGTVQRVSIPTDRETGRPRGFAFVE-MQEESKEDAAIE 60
Query: 115 HLNESELHGRQLKVTVKR 132
L+ +E GR LKV R
Sbjct: 61 ALDGAEWMGRDLKVNKAR 78
>gi|406880229|gb|EKD28634.1| RNA-binding protein [uncultured bacterium]
Length = 95
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 75 QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL-HLNESELHGRQLKVTVKR 132
Q F+ G V+ V + TD+ G+PKG+A+VE +A+ LN+ ++ GR +KV+V R
Sbjct: 19 QIFEGVGPVSSVNMITDRDTGRPKGFAFVEMENKNDGDKAISELNDVDVKGRSIKVSVAR 78
Query: 133 TNVPGMKQHR-PRRPN 147
P Q PRR N
Sbjct: 79 ---PKTAQSSGPRRFN 91
>gi|326494758|dbj|BAJ94498.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 494
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 16/96 (16%)
Query: 45 EMASKQDPAAGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF 93
+ASK + GSS+ + V +R +FVG ++F+ G + V + D
Sbjct: 110 SIASKNN----GSSIGSPGPVRTRKIFVGGLASNVTEVEFRRYFEQFGMITDVVVMYDHN 165
Query: 94 GQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
Q P+G+ ++ + +AV +ALH N EL+G+ ++V
Sbjct: 166 TQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEV 201
>gi|406866939|gb|EKD19978.1| translation initiation factor eIF4B [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 575
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 77 FQSCGTVNRVTIRTDKFG-QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
F C N V I DK +PKG+ Y EF + +++AL LN S GR ++++V
Sbjct: 97 FAGCECTN-VRIIEDKMEMKPKGFGYAEFASRDGLKQALTLNGSSFQGRNIRISV 150
>gi|242067161|ref|XP_002448857.1| hypothetical protein SORBIDRAFT_05g000362 [Sorghum bicolor]
gi|241934700|gb|EES07845.1| hypothetical protein SORBIDRAFT_05g000362 [Sorghum bicolor]
Length = 96
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 75 QHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRT 133
QHF CG + RV+I TD KG+A+++F +V +AL L+ S+ +L V R
Sbjct: 7 QHFGECGEITRVSIPLTDNASGRKGFAFIDFKDQNSVSKALELDGSD----RLHVAKARG 62
Query: 134 NV 135
NV
Sbjct: 63 NV 64
>gi|195453715|ref|XP_002073909.1| GK12898 [Drosophila willistoni]
gi|194169994|gb|EDW84895.1| GK12898 [Drosophila willistoni]
Length = 421
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 11/100 (11%)
Query: 54 AGGSSLANREEVDSRSVFVGNQH-----------FQSCGTVNRVTIRTDKFGQPKGYAYV 102
AG A+ + R VFVGN F SCG ++ + D G AYV
Sbjct: 237 AGDGDKASSDADAKRCVFVGNLKYSATEKKLHDVFSSCGEIDNIRCLQDGTKGCSGVAYV 296
Query: 103 EFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHR 142
F ++AV AL LN++ + R + V G KQ R
Sbjct: 297 NFKNADAVGLALELNQTLIDDRPINVERYSVKKLGAKQQR 336
>gi|109065778|ref|XP_001083260.1| PREDICTED: putative RNA-binding protein 11 [Macaca mulatta]
gi|355560395|gb|EHH17081.1| RNA-binding motif protein 11 [Macaca mulatta]
Length = 281
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAV 110
+EE D R+VFVGN + F G + +VTI D+ G+PK + +V F E+V
Sbjct: 5 QEEAD-RTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESV 63
Query: 111 QEALH-LNESELHGRQLKV 128
A+ LN L+GR + V
Sbjct: 64 SYAIALLNGIRLYGRPINV 82
>gi|39930581|ref|NP_938044.1| splicing regulator RBM11 [Mus musculus]
gi|81912952|sp|Q80YT9.1|RBM11_MOUSE RecName: Full=Splicing regulator RBM11; AltName: Full=RNA-binding
motif protein 11
gi|29747748|gb|AAH50779.1| Rbm11 protein [Mus musculus]
Length = 238
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAV 110
+EE D R+VFVGN + F G + +VT+ D+ G+PK + +V F E+V
Sbjct: 5 QEEAD-RTVFVGNLEARVREEILYELFLQAGPLTKVTLCKDRDGKPKSFGFVCFKHPESV 63
Query: 111 QEALH-LNESELHGRQLKV 128
A+ LN L+GR + V
Sbjct: 64 SYAIALLNGIRLYGRPINV 82
>gi|186682695|ref|YP_001865891.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
gi|186465147|gb|ACC80948.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
Length = 104
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 13/73 (17%)
Query: 69 SVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 115
S++VGN Q F GTV+RV + TD+ G+P+G+A+VE Q A+
Sbjct: 2 SIYVGNLSYQVTEEDLKQAFAEYGTVSRVQLPTDRETGRPRGFAFVEMESDTQEQAAIDA 61
Query: 116 LNESELHGRQLKV 128
L+ +E GR LKV
Sbjct: 62 LDGAEWMGRDLKV 74
>gi|355747455|gb|EHH51952.1| RNA-binding motif protein 11 [Macaca fascicularis]
Length = 281
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAV 110
+EE D R+VFVGN + F G + +VTI D+ G+PK + +V F E+V
Sbjct: 5 QEEAD-RTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESV 63
Query: 111 QEALH-LNESELHGRQLKV 128
A+ LN L+GR + V
Sbjct: 64 SYAIALLNGIRLYGRPINV 82
>gi|297707634|ref|XP_002830605.1| PREDICTED: putative RNA-binding protein 11 [Pongo abelii]
Length = 281
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAV 110
+EE D R+VFVGN + F G + +VTI D+ G+PK + +V F E+V
Sbjct: 5 QEEAD-RTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESV 63
Query: 111 QEALH-LNESELHGRQLKV 128
A+ LN L+GR + V
Sbjct: 64 SYAIALLNGIRLYGRPINV 82
>gi|26333183|dbj|BAC30309.1| unnamed protein product [Mus musculus]
gi|148665853|gb|EDK98269.1| RNA binding motif protein 11, isoform CRA_b [Mus musculus]
Length = 237
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAV 110
+EE D R+VFVGN + F G + +VT+ D+ G+PK + +V F E+V
Sbjct: 4 QEEAD-RTVFVGNLEARVREEILYELFLQAGPLTKVTLCKDRDGKPKSFGFVCFKHPESV 62
Query: 111 QEALH-LNESELHGRQLKV 128
A+ LN L+GR + V
Sbjct: 63 SYAIALLNGIRLYGRPINV 81
>gi|169234630|ref|NP_658983.3| splicing regulator RBM11 [Homo sapiens]
gi|9978670|sp|P57052.1|RBM11_HUMAN RecName: Full=Splicing regulator RBM11; AltName: Full=RNA-binding
motif protein 11
gi|7768750|dbj|BAA95545.1| RBM11 [Homo sapiens]
gi|119630467|gb|EAX10062.1| RNA binding motif protein 11, isoform CRA_c [Homo sapiens]
Length = 281
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAV 110
+EE D R+VFVGN + F G + +VTI D+ G+PK + +V F E+V
Sbjct: 5 QEEAD-RTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESV 63
Query: 111 QEALH-LNESELHGRQLKV 128
A+ LN L+GR + V
Sbjct: 64 SYAIALLNGIRLYGRPINV 82
>gi|67483728|ref|XP_657084.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56474323|gb|EAL51698.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449705266|gb|EMD45349.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 136
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 77 FQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALH-LNESELHGRQLKVTVKRTN 134
F+ GTV + TD+ Q KG+ +V F + E ++A+ +NE EL GR++KV V R
Sbjct: 22 FEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIEEMNEQELEGRRIKVDVSRPR 81
Query: 135 VPG 137
G
Sbjct: 82 EEG 84
>gi|397496846|ref|XP_003819236.1| PREDICTED: putative RNA-binding protein 11 [Pan paniscus]
Length = 281
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAV 110
+EE D R+VFVGN + F G + +VTI D+ G+PK + +V F E+V
Sbjct: 5 QEEAD-RTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESV 63
Query: 111 QEALH-LNESELHGRQLKV 128
A+ LN L+GR + V
Sbjct: 64 SYAIALLNGIRLYGRPINV 82
>gi|329669018|gb|AEB96397.1| cleavage stimulation factor subunit 2 [Angiostrongylus cantonensis]
Length = 97
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 13/79 (16%)
Query: 69 SVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 115
SV+VGN HF G V V I D+ G+PKG+ + EF Q A++
Sbjct: 19 SVYVGNIPYQTTEDAIGNHFSQAGRVTNVRIVYDRETGRPKGFGFCEFSDEAGAQNAVNT 78
Query: 116 LNESELHGRQLKVTVKRTN 134
LN ++ +GR L+V N
Sbjct: 79 LNGTDFNGRSLRVNWANKN 97
>gi|253683404|ref|NP_001156572.1| RNA binding motif protein 34 [Acyrthosiphon pisum]
gi|239792368|dbj|BAH72536.1| ACYPI010185 [Acyrthosiphon pisum]
Length = 418
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 12/73 (16%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALH 115
+ +F+GN +F+ CGT++ V I R + G KG+ YV+F E+V+ A+
Sbjct: 281 KGIFIGNLPYSIQEDEIWDYFKDCGTISAVRIVRDNATGVSKGFGYVDFETKESVELAMQ 340
Query: 116 LNESELHGRQLKV 128
+ ++ R+++V
Sbjct: 341 IKGKKVQNREIRV 353
>gi|114683624|ref|XP_531391.2| PREDICTED: splicing regulator RBM11 [Pan troglodytes]
Length = 281
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAV 110
+EE D R+VFVGN + F G + +VTI D+ G+PK + +V F E+V
Sbjct: 5 QEEAD-RTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESV 63
Query: 111 QEALH-LNESELHGRQLKV 128
A+ LN L+GR + V
Sbjct: 64 SYAIALLNGIRLYGRPINV 82
>gi|342874383|gb|EGU76397.1| hypothetical protein FOXB_13075 [Fusarium oxysporum Fo5176]
Length = 293
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 21/117 (17%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEAL 114
SR VFVGN F S G V R + D + G+PKG+ + ++ +++ A+
Sbjct: 7 SRVVFVGNIPYGLTEEQITDIFSSAGKVERFRLVYDPETGRPKGFGFADYPDTDSASSAV 66
Query: 115 -HLNESELHGRQLKVTVKR-------TNVPGMKQHRPRRPNPFM-VYQSRGAIIPPF 162
+LN+ E+ GR+L+V PGM + P N + Y ++ + +PP
Sbjct: 67 RNLNDFEIMGRKLRVDFSNDQKSSDDDKDPGMSNYNPHVSNGAVPSYSAQPSTLPPL 123
>gi|209877242|ref|XP_002140063.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555669|gb|EEA05714.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 294
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 36/58 (62%)
Query: 75 QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKR 132
+ F++ G + ++ + TD GQ KGYA++E+ +++EA + + GR++ V V+R
Sbjct: 121 KEFETYGPIKKICLITDLNGQSKGYAFIEYESESSLKEAYRYSNKVIDGRKVIVDVER 178
>gi|393246659|gb|EJD54168.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 531
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 13/75 (17%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL 114
S ++FVGN + F + G V V + TD+ GQPKG+ YVEF E +AL
Sbjct: 371 SATLFVGNLAFSATQDAVYELFGAVGEVVNVRLPTDRDSGQPKGFGYVEFADVETASKAL 430
Query: 115 H-LNESELHGRQLKV 128
+ L ++ GR +++
Sbjct: 431 NELGGTDFEGRNIRL 445
>gi|326498843|dbj|BAK02407.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 571
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 75 QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 128
+HF CG + RV++ D + G KG AY++F + +AL L+ S+L G L V
Sbjct: 428 EHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSDLGGCNLYV 482
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 75 QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH-LNESELHGRQLKV 128
Q F G V V + T + G PKG+ +VEF +E Q+AL LN +L GR +++
Sbjct: 324 QFFAQIGEVVDVRLATHEDGHPKGFGHVEFASAEDAQKALDALNGGDLIGRPVRL 378
>gi|291400883|ref|XP_002716809.1| PREDICTED: RNA binding motif protein 7-like [Oryctolagus cuniculus]
Length = 238
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAV 110
+EE D R+VFVGN + F G + +VTI D+ G+PK + +V F E+V
Sbjct: 5 QEEAD-RTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESV 63
Query: 111 QEALH-LNESELHGRQLKV 128
A+ LN L+GR + V
Sbjct: 64 SYAIALLNGIRLYGRPINV 82
>gi|326913169|ref|XP_003202913.1| PREDICTED: putative RNA-binding protein 11-like [Meleagris
gallopavo]
Length = 221
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 12/73 (16%)
Query: 68 RSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH- 115
R++FVGN + F G + +VTI DK G+PK + +V F E+V A+
Sbjct: 12 RTLFVGNLESRVREEILYELFLQAGPLTKVTICKDKEGKPKSFGFVCFKHKESVPYAIAL 71
Query: 116 LNESELHGRQLKV 128
LN L+GR +KV
Sbjct: 72 LNGIRLYGRPIKV 84
>gi|358399302|gb|EHK48645.1| hypothetical protein TRIATDRAFT_281461 [Trichoderma atroviride IMI
206040]
Length = 580
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 77 FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 130
F+ C V+ I + +PKG+ YVEF E +++AL L+ GR +K+ V
Sbjct: 99 FEGCDVVSVRIIEDRELQRPKGFGYVEFGNVEGLKKALDLDGESFEGRMIKIKV 152
>gi|219111803|ref|XP_002177653.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410538|gb|EEC50467.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 76
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 13/72 (18%)
Query: 70 VFVGN-----------QHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEAL-HL 116
VFVGN Q F G V V + TD G+P+G+A+VEF ++A A+ ++
Sbjct: 1 VFVGNLAFNTTEEQLQQVFSDIGRVIHVRLVTDVDTGKPRGFAFVEFSDAQAALSAIRNM 60
Query: 117 NESELHGRQLKV 128
N+ EL+GR+++V
Sbjct: 61 NDYELNGRRIRV 72
>gi|431838638|gb|ELK00569.1| Putative RNA-binding protein 11 [Pteropus alecto]
Length = 238
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAV 110
+EE D R+VFVGN + F G + +VTI D+ G+PK + +V F E+V
Sbjct: 5 QEEAD-RTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESV 63
Query: 111 QEALH-LNESELHGRQLKV 128
A+ LN L+GR + V
Sbjct: 64 SYAIALLNGIRLYGRPINV 82
>gi|384498968|gb|EIE89459.1| hypothetical protein RO3G_14170 [Rhizopus delemar RA 99-880]
Length = 344
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 13/75 (17%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL 114
SR VFVGN + F+ G V + D+ G+PKGY + EF +E A+
Sbjct: 8 SRVVFVGNIPFELSEEQLIEVFKEVGPVASFRLLFDRETGRPKGYGFCEFYDAETAASAV 67
Query: 115 -HLNESELHGRQLKV 128
+LN+ E+ GRQL+V
Sbjct: 68 RNLNDYEIGGRQLRV 82
>gi|7770338|gb|AAF69708.1|AC016041_13 F27J15.29 [Arabidopsis thaliana]
Length = 193
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 75 QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHG 123
+HF SCG + V++ D+ G KG AY+EF SE ++AL LN S++ G
Sbjct: 67 EHFSSCGEIKNVSVPIDRDTGNSKGIAYLEF--SEGKEKALELNGSDMGG 114
>gi|268553731|ref|XP_002634852.1| Hypothetical protein CBG13969 [Caenorhabditis briggsae]
Length = 545
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 77 FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL-HLNESELHGRQLKVTVKRTNV 135
F S G ++++ + D G+ KG+A + F ++ Q+A LN+ E+ GR++++T+K+
Sbjct: 289 FDSFGRIDKLDVEKDMNGENKGFAVITFRNADEAQKACEQLNDFEVAGRKMRLTIKQEPT 348
Query: 136 P 136
P
Sbjct: 349 P 349
>gi|302340505|ref|YP_003805711.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM 11293]
gi|301637690|gb|ADK83117.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM 11293]
Length = 88
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 18/91 (19%)
Query: 67 SRSVFVGNQH-----------FQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL 114
++ ++VGN + F G VN V I TD++ GQ KG+ +VE + +A + A+
Sbjct: 2 AKKIYVGNLNYSTREESLQDLFGQYGQVNSVNIITDRYTGQSKGFGFVEMEEMDAAEAAI 61
Query: 115 H-LNESELHGRQLKVTVKRTNVPGMKQHRPR 144
L+ + L GR+L+V N ++ RPR
Sbjct: 62 SALDGTSLDGRELRV-----NEAKERERRPR 87
>gi|358399615|gb|EHK48952.1| hypothetical protein TRIATDRAFT_164478, partial [Trichoderma
atroviride IMI 206040]
Length = 571
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 14/100 (14%)
Query: 55 GGSSLANREEVDSRSVFVG-----------NQHFQSCGTVNRVTIRTDKF-GQPKGYAYV 102
G ++ +E D R+VFV + F+ G VN I D+ G+ KG YV
Sbjct: 171 GANAPLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISGRSKGVGYV 230
Query: 103 EFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHR 142
EF +AVQ+AL L +L G + V V+ T +Q R
Sbjct: 231 EFKSEDAVQQALQLTGQKLLG--IPVIVQHTEAEKNRQAR 268
>gi|70983602|ref|XP_747328.1| nucleic acid-binding protein [Aspergillus fumigatus Af293]
gi|66844954|gb|EAL85290.1| nucleic acid-binding protein [Aspergillus fumigatus Af293]
gi|159123666|gb|EDP48785.1| nucleic acid-binding protein [Aspergillus fumigatus A1163]
Length = 324
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 20/147 (13%)
Query: 6 MDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKV--GNEMASKQDPAAGGSSLANRE 63
+D+I T+N+ + + +E + + MH ++ G + ++ + G L
Sbjct: 173 VDLI-TDNRGLSRGFAYVHFDSIEAAKSCVEAMHLQIFEGRRITAQYASSGGTRPL---- 227
Query: 64 EVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQ 111
SR++++GN + F+ V V + D+ GQP+G+A+ EFL E+ Q
Sbjct: 228 RPASRTLYLGNLSFEMTDRDLNELFRDINNVIDVRVSVDRRTGQPRGFAHAEFLDVESAQ 287
Query: 112 EALH-LNESELHGRQLKVTVKRTNVPG 137
+A L+ +GR+++V TN G
Sbjct: 288 KAFEILSGKAPYGRRIRVDYSSTNRRG 314
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 21/98 (21%)
Query: 69 SVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQ---EAL 114
+V+VGN H Q G V RV + TD G +G+AYV F EA + EA+
Sbjct: 145 TVYVGNLFYDVTAEDLKNHMQQFGVVERVDLITDNRGLSRGFAYVHFDSIEAAKSCVEAM 204
Query: 115 HLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVY 152
HL E GR ++T + + G RP RP +Y
Sbjct: 205 HLQIFE--GR--RITAQYASSGGT---RPLRPASRTLY 235
>gi|406868018|gb|EKD21055.1| RNA binding domain containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 426
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 67 SRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 115
S S++VGN + F+S G + VTI +D G KG+ YVEF E A+
Sbjct: 230 SNSIYVGNLLFDITQEDIQREFESFGPIKSVTIASDNRGLSKGFGYVEFESIEQATAAIE 289
Query: 116 -LNESELHGRQLKV 128
N++ L GR+L V
Sbjct: 290 GKNQAVLEGRRLVV 303
>gi|374725008|gb|EHR77088.1| putative RNA-binding protein [uncultured marine group II
euryarchaeote]
Length = 477
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 77 FQSCGTVNRVTIRTDKFGQPKGYAYV---EFLQSEAVQEALHLNESELHGRQLKVTVKR 132
F TVN + + TD G+PKG+A+ E Q +A+ E LN +EL GR++KV V +
Sbjct: 377 FDGVATVNELVMATDNAGKPKGFAFAFVKETDQGDAIVE--KLNGTELLGRKIKVDVSQ 433
>gi|357157795|ref|XP_003577917.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like
[Brachypodium distachyon]
Length = 244
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 54 AGGSSLANREEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKF-GQPKGYAY 101
A + L EE+ +R ++VGN F GTV R + DK+ G+ + + +
Sbjct: 55 ASSAVLEAPEELATRKLYVGNIPRTVTNDELRAMFADHGTVLRADVMYDKYSGRSRRFGF 114
Query: 102 VEFLQSEAVQEALH-LNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMV 151
V E A+ LNE+E+ GR++KV V + +P + P P P V
Sbjct: 115 VTMSSVEEANAAIESLNETEVGGRKIKVNVTESFLPNIDPSAP-EPEPAFV 164
>gi|434405771|ref|YP_007148656.1| RRM domain-containing RNA-binding protein [Cylindrospermum stagnale
PCC 7417]
gi|428260026|gb|AFZ25976.1| RRM domain-containing RNA-binding protein [Cylindrospermum stagnale
PCC 7417]
Length = 103
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 17/75 (22%)
Query: 69 SVFVGNQHFQSC-----------GTVNRVTIRTDK-FGQPKGYAYVEF---LQSEAVQEA 113
S++VGN +Q GTVNRV + TD+ G+P+G+A+VE +Q +A +A
Sbjct: 2 SIYVGNLSYQVTEEDLKLAFKEYGTVNRVQLPTDRETGRPRGFAFVEMETDVQEQAAIDA 61
Query: 114 LHLNESELHGRQLKV 128
L+ +E GR LKV
Sbjct: 62 --LDGAEWMGRDLKV 74
>gi|336370674|gb|EGN99014.1| hypothetical protein SERLA73DRAFT_181797 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383445|gb|EGO24594.1| hypothetical protein SERLADRAFT_468158 [Serpula lacrymans var.
lacrymans S7.9]
Length = 484
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 12/73 (16%)
Query: 69 SVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLN 117
+ F+GN +F T++ V I D+ +PKG+ Y+EF + E +++AL +
Sbjct: 82 TAFIGNLAFDMTESELESYFAPQQTIS-VKIIKDREDKPKGFGYIEFTELEGLKDALAKS 140
Query: 118 ESELHGRQLKVTV 130
S L GR ++V+V
Sbjct: 141 GSNLSGRTIRVSV 153
>gi|254424963|ref|ZP_05038681.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
gi|196192452|gb|EDX87416.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
Length = 92
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 16/88 (18%)
Query: 69 SVFVGNQH-----------FQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 115
S++VGN F GTV R+T+ TD+ G+P+G+A+VE + ++A+
Sbjct: 2 SIYVGNLSYSAKEEDLEGVFGEYGTVKRITLPTDRETGRPRGFAFVEMEEDATEEKAIEA 61
Query: 116 LNESELHGRQLKVTVKRTNVPGMKQHRP 143
L+ +E GR+L+V + P ++RP
Sbjct: 62 LDGAEWMGRELRVNKAKPREP---RNRP 86
>gi|410970206|ref|XP_003991579.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulator RBM11 [Felis
catus]
Length = 238
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 62 REEVDSRSVFVGN-----------QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAV 110
+EE D R+VFVGN + F G + +VTI D+ G+PK + +V F E+V
Sbjct: 5 QEEAD-RTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESV 63
Query: 111 QEALH-LNESELHGRQLKV 128
A+ LN L+GR + V
Sbjct: 64 SYAIALLNGIRLYGRPINV 82
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,824,172,658
Number of Sequences: 23463169
Number of extensions: 105552119
Number of successful extensions: 358593
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 2382
Number of HSP's that attempted gapping in prelim test: 355004
Number of HSP's gapped (non-prelim): 4364
length of query: 185
length of database: 8,064,228,071
effective HSP length: 134
effective length of query: 51
effective length of database: 9,215,130,721
effective search space: 469971666771
effective search space used: 469971666771
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 72 (32.3 bits)