Query 029900
Match_columns 185
No_of_seqs 128 out of 1140
Neff 3.8
Searched_HMMs 29240
Date Mon Mar 25 08:18:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029900.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029900hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bbn_T Ribosomal protein S20; 100.0 2.5E-57 8.4E-62 380.4 5.9 176 2-182 4-191 (202)
2 2vqe_T 30S ribosomal protein S 100.0 8.8E-34 3E-38 218.0 11.3 91 73-172 4-94 (106)
3 3r8n_T 30S ribosomal protein S 100.0 6E-32 2E-36 200.6 10.4 84 77-169 1-84 (85)
4 2rbd_A BH2358 protein; putativ 65.1 4.1 0.00014 31.5 2.9 25 158-182 140-164 (171)
5 1wfd_A Hypothetical protein 15 27.6 1.6E+02 0.0055 20.7 6.8 75 100-180 10-92 (93)
6 2of3_A ZYG-9; multifunctional 26.0 1.4E+02 0.0047 25.2 6.1 36 138-176 166-201 (266)
7 1vyk_A Oxygen-evolving enhance 24.7 49 0.0017 26.1 2.9 11 75-85 49-59 (149)
8 3lys_A Prophage PI2 protein 01 24.5 1.4E+02 0.0048 19.9 5.0 32 150-182 67-98 (112)
9 2kj8_A Putative prophage CPS-5 22.5 1.1E+02 0.0037 20.6 4.1 35 128-162 69-103 (118)
10 2f6m_A Suppressor protein STP2 22.1 2E+02 0.0068 19.8 6.1 34 132-165 16-49 (65)
11 3t49_A SCIN-B, fibrinogen-bind 21.0 1.4E+02 0.0049 21.2 4.4 46 95-146 27-72 (73)
12 2odm_A YLAN, UPF0358 protein M 20.9 1.7E+02 0.0059 21.6 5.0 39 131-169 46-84 (91)
13 3bbo_R Ribosomal protein L19; 20.0 22 0.00075 30.4 0.0 38 11-48 27-65 (233)
No 1
>3bbn_T Ribosomal protein S20; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=100.00 E-value=2.5e-57 Score=380.40 Aligned_cols=176 Identities=67% Similarity=0.937 Sum_probs=97.9
Q ss_pred ccccccccccccccchhhhcccccCCCCCCcc----------ccccceeeeccccccc-cccCccccccccCCCcceeee
Q 029900 2 ALHCLSSSSCLTIQSKFKTLSLNNNSSSHSSF----------ATFKSLCFSNKLSHNV-FSTGSLTMSPIQRPMRHSVVC 70 (185)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~f~~~~~~~~-~s~~~~~~~~~~~~~~~~~~~ 70 (185)
+++||+ +||+||++|++|||++++||+.++ ..+++|+|+++|+|++ |++|.+++.++.|+ .|||
T Consensus 4 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~s~~~~~~~~~~~~~~~~~~r~---~~v~ 78 (202)
T 3bbn_T 4 IVQCLS--SCATLESQFKVLSLKGISCSSPSSSFSNRRGASATLSSSLSFSQSVSQCVAFSTGNLWVQKPMRQ---LIVC 78 (202)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhhh--hhhcCchhhheeeecccccCCcccccCCcccCccccccccchhhhcccceeeccccccccccccc---eeEE
Confidence 467877 999999999999999999777221 3488999999999999 99999999999988 4999
Q ss_pred hh-hcccCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCCCCCccchHHHHHHHHHHHHHHHHhhhCc
Q 029900 71 EA-ATKKKADSAAKRARQAEKRRIYNKSRKSEVKTRMKKVLEALDGLRKKPDAQPEEVLPVEKLIAEAYSVIDKAVKVGT 149 (185)
Q Consensus 71 ~~-~~maniKSA~KRiRq~eKrRlrNrs~KS~vRT~iKKv~~AIeagdk~~~a~a~d~~~A~~~l~~a~S~IDKAakKGV 149 (185)
|+ ++|+|+|||+||+||+|+||+||+++||+|||+||||+++|++++..++++++|+++|+++|..+++.||||++|||
T Consensus 79 ~a~~~~aN~KSAkKRiRqneKRRlrNka~KS~vRTaIKKv~~AIea~~~~~~~~~gDke~A~~al~~A~s~IDKAa~KGV 158 (202)
T 3bbn_T 79 EAAAPTKKADSAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALEGLKKKTDAQADEIVTVEKLIGEAYSAIDKAVKVKA 158 (202)
T ss_dssp -CCCSSCCCCCSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCCCSSSCCCHHHHHHHHHHHHHTTSSSSSS
T ss_pred eccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCcCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99 99999999999999999999999999999999999999999997766677789999999999999999999999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHhhCcCCCCCCC
Q 029900 150 LHRNTGARRKSRLARRKKAVEIHHGWYTPTPAE 182 (185)
Q Consensus 150 IHKNtAARKKSRLakkin~l~~~~g~~~p~~~~ 182 (185)
||+|+|+|+||||+++||++.++||||+|+|+.
T Consensus 159 IHKNkAARKKSRLak~vnal~~~~g~y~pa~~~ 191 (202)
T 3bbn_T 159 LHKNTGARRKSRLARRKKAVEIHHGWYVPDAAA 191 (202)
T ss_dssp SCTTHHHHHHHHHTTHHHHSSCC----------
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhCCCCCCccc
Confidence 999999999999999999999999999999764
No 2
>2vqe_T 30S ribosomal protein S20; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: a.7.6.1 PDB: 1gix_W* 1hnw_T* 1hnx_T* 1hnz_T* 1hr0_T 1j5e_T 1jgo_W* 1jgp_W* 1jgq_W* 1ml5_W* 1yl4_W 2b64_T* 2b9m_T* 2b9o_T* 2f4v_T* 2ow8_u* 2qnh_u* 2uxb_T* 1fjg_T* 2uxd_T* ...
Probab=100.00 E-value=8.8e-34 Score=218.04 Aligned_cols=91 Identities=42% Similarity=0.472 Sum_probs=83.3
Q ss_pred hcccCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCCCCCccchHHHHHHHHHHHHHHHHhhhCcchh
Q 029900 73 ATKKKADSAAKRARQAEKRRIYNKSRKSEVKTRMKKVLEALDGLRKKPDAQPEEVLPVEKLIAEAYSVIDKAVKVGTLHR 152 (185)
Q Consensus 73 ~~maniKSA~KRiRq~eKrRlrNrs~KS~vRT~iKKv~~AIeagdk~~~a~a~d~~~A~~~l~~a~S~IDKAakKGVIHK 152 (185)
.+|+||+||+||+||+|++|+||+++||+|||+||+|+++|++|| .++|+++|..+++.||++++|||||+
T Consensus 4 k~MAN~KSA~KRirq~ekrr~rNka~kS~~rT~iKkv~~Ai~~gd---------k~~A~~~l~~a~s~iDkaa~KGviHK 74 (106)
T 2vqe_T 4 KKPKRNLSALKRHRQSLKRRLRNKAKKSAIKTLSKKAVQLAQEGK---------AEEALKIMRKAESLIDKAAKGSTLHK 74 (106)
T ss_dssp ----CCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHHTTTTSSCT
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---------HHHHHHHHHHHHHHHHHHHHcCCccH
Confidence 689999999999999999999999999999999999999999865 47899999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHh
Q 029900 153 NTGARRKSRLARRKKAVEIH 172 (185)
Q Consensus 153 NtAARKKSRLakkin~l~~~ 172 (185)
|+|+|+||||+++||.+...
T Consensus 75 N~AARkKSRLak~v~~l~~~ 94 (106)
T 2vqe_T 75 NAAARRKSRLMRKVRQLLEA 94 (106)
T ss_dssp THHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999998763
No 3
>3r8n_T 30S ribosomal protein S20; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_T 3fih_T* 3j18_T* 2wwl_T 3oar_T 3oaq_T 3ofb_T 3ofa_T 3ofp_T 3ofx_T 3ofy_T 3ofo_T 3r8o_T 4a2i_T 4gd1_T 4gd2_T 2qal_T* 1p6g_T 1p87_T 2aw7_T ...
Probab=99.97 E-value=6e-32 Score=200.60 Aligned_cols=84 Identities=33% Similarity=0.437 Sum_probs=80.8
Q ss_pred CchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCCCCCccchHHHHHHHHHHHHHHHHhhhCcchhhhHH
Q 029900 77 KADSAAKRARQAEKRRIYNKSRKSEVKTRMKKVLEALDGLRKKPDAQPEEVLPVEKLIAEAYSVIDKAVKVGTLHRNTGA 156 (185)
Q Consensus 77 niKSA~KRiRq~eKrRlrNrs~KS~vRT~iKKv~~AIeagdk~~~a~a~d~~~A~~~l~~a~S~IDKAakKGVIHKNtAA 156 (185)
||+||+||+||+|++|+||++++|+|||+||+|+++|++|| .++|+++|..+++.||+|++|||||+|+|+
T Consensus 1 N~kSA~KRir~~ekrr~rN~~~kS~~rT~iKk~~~Ai~~gd---------~~~A~~~l~~a~~~iDkaa~KGviHkN~AA 71 (85)
T 3r8n_T 1 NIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGD---------KAAAQKAFNEMQPIVDRQAAKGLIHKNKAA 71 (85)
T ss_dssp CCSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---------HHHHHHHHHHHHHHHHHHHHHSTTTTHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---------HHHHHHHHHHHHHHHHHHHHCCCccHHHHH
Confidence 79999999999999999999999999999999999999865 478999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 029900 157 RRKSRLARRKKAV 169 (185)
Q Consensus 157 RKKSRLakkin~l 169 (185)
|+||||+++||+|
T Consensus 72 RkKSrL~~~v~~l 84 (85)
T 3r8n_T 72 RHKANLTAQINKL 84 (85)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999986
No 4
>2rbd_A BH2358 protein; putative spore coat protein, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.54A {Bacillus halodurans c-125}
Probab=65.12 E-value=4.1 Score=31.48 Aligned_cols=25 Identities=20% Similarity=0.541 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHhhCcCCCCCCC
Q 029900 158 RKSRLARRKKAVEIHHGWYTPTPAE 182 (185)
Q Consensus 158 KKSRLakkin~l~~~~g~~~p~~~~ 182 (185)
....+...+-.+..++|||.|.|..
T Consensus 140 ~~~~~~~~i~~~m~~KGw~~~pP~~ 164 (171)
T 2rbd_A 140 AKVQFGGKMLKLNKNKGWLIPPPLH 164 (171)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCCCBC
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCc
Confidence 3456778899999999999777653
No 5
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=27.62 E-value=1.6e+02 Score=20.71 Aligned_cols=75 Identities=15% Similarity=0.075 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCccchHHHHHHHHHHHHHHHHhhhCc------chhhhHHHHHHHHHHHHHHH--HH
Q 029900 100 SEVKTRMKKVLEALDGLRKKPDAQPEEVLPVEKLIAEAYSVIDKAVKVGT------LHRNTGARRKSRLARRKKAV--EI 171 (185)
Q Consensus 100 S~vRT~iKKv~~AIeagdk~~~a~a~d~~~A~~~l~~a~S~IDKAakKGV------IHKNtAARKKSRLakkin~l--~~ 171 (185)
..+-.++.-+..||+.. .+++.++|..+|..+...+.++++--- +=+.+..-...|.......+ ..
T Consensus 10 ~~l~~Ai~lv~~Ave~D------~~g~y~eAl~~Y~~Aie~l~~alk~e~~~~~k~~l~~K~~eYl~RAE~LK~~l~~~~ 83 (93)
T 1wfd_A 10 SDSTAAVAVLKRAVELD------AESRYQQALVCYQEGIDMLLQVLKGTKESSKRCVLRTKISGYMDRAENIKKYLDQEK 83 (93)
T ss_dssp CHHHHHHHHHHHHHHHH------HTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH------HhCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 34556677777888762 236788999999999999999886421 11122333333333322222 23
Q ss_pred hhCcCCCCC
Q 029900 172 HHGWYTPTP 180 (185)
Q Consensus 172 ~~g~~~p~~ 180 (185)
..|-|.|..
T Consensus 84 ~~g~~~~~~ 92 (93)
T 1wfd_A 84 EDGKSGPSS 92 (93)
T ss_dssp HHTCCSSSC
T ss_pred cCCCCCCCC
Confidence 478888863
No 6
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}
Probab=25.98 E-value=1.4e+02 Score=25.16 Aligned_cols=36 Identities=14% Similarity=0.061 Sum_probs=27.2
Q ss_pred HHHHHHHhhhCcchhhhHHHHHHHHHHHHHHHHHhhCcC
Q 029900 138 YSVIDKAVKVGTLHRNTGARRKSRLARRKKAVEIHHGWY 176 (185)
Q Consensus 138 ~S~IDKAakKGVIHKNtAARKKSRLakkin~l~~~~g~~ 176 (185)
.+..+.... |+-||| +|-+.--..-+..+...||--
T Consensus 166 ~~v~~~l~~-g~ksKN--~R~R~e~l~~l~~li~~~G~~ 201 (266)
T 2of3_A 166 LKMTPMLLD-ALKSKN--ARQRSECLLVIEYYITNAGIS 201 (266)
T ss_dssp HHHHHHHHH-GGGCSC--HHHHHHHHHHHHHHHHHHCSG
T ss_pred HHHHHHHHH-HHccCC--HHHHHHHHHHHHHHHHhcCCC
Confidence 334555555 999999 677777788888888999973
No 7
>1vyk_A Oxygen-evolving enhancer protein 3; photosystem II, oxygen-enhancer evolving complex, water oxidizing complex, PSBQ, OEE3, photosynthesis; 1.49A {Spinacia oleracea} PDB: 1nze_A
Probab=24.72 E-value=49 Score=26.10 Aligned_cols=11 Identities=18% Similarity=0.271 Sum_probs=5.7
Q ss_pred ccCchhHHHHH
Q 029900 75 KKKADSAAKRA 85 (185)
Q Consensus 75 maniKSA~KRi 85 (185)
|+.|+...+++
T Consensus 49 ~~rIk~~a~~i 59 (149)
T 1vyk_A 49 AQRAKVSASEI 59 (149)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44555555554
No 8
>3lys_A Prophage PI2 protein 01, integrase; helical N-terminal domain, structural genomics, PSI-2, protein structure initiative; 2.80A {Lactococcus lactis}
Probab=24.51 E-value=1.4e+02 Score=19.90 Aligned_cols=32 Identities=9% Similarity=0.062 Sum_probs=19.3
Q ss_pred chhhhHHHHHHHHHHHHHHHHHhhCcCCCCCCC
Q 029900 150 LHRNTGARRKSRLARRKKAVEIHHGWYTPTPAE 182 (185)
Q Consensus 150 IHKNtAARKKSRLakkin~l~~~~g~~~p~~~~ 182 (185)
...+++.|..+.|...++- +...||..-.|..
T Consensus 67 ~s~~t~~~~~~~l~~i~~~-Av~~g~i~~NP~~ 98 (112)
T 3lys_A 67 HAKASTKGFHTRVRASIQC-LIEEGRLQKDFTT 98 (112)
T ss_dssp SCHHHHHHHHHHHHHHHHH-HHHTTSCSSCTTS
T ss_pred ccHHHHHHHHHHHHHHHHH-HHHCCCcccCccc
Confidence 4566677777666665554 4567776544443
No 9
>2kj8_A Putative prophage CPS-53 integrase; INTS, INTC, YFDB, DNA integration, DNA recombination, structural genomics, protein structure initiative; NMR {Escherichia coli k-12}
Probab=22.51 E-value=1.1e+02 Score=20.65 Aligned_cols=35 Identities=14% Similarity=0.076 Sum_probs=23.6
Q ss_pred hHHHHHHHHHHHHHHHHhhhCcchhhhHHHHHHHH
Q 029900 128 LPVEKLIAEAYSVIDKAVKVGTLHRNTGARRKSRL 162 (185)
Q Consensus 128 ~~A~~~l~~a~S~IDKAakKGVIHKNtAARKKSRL 162 (185)
..+...+...-..++-|+..|+|..|-+..-+..+
T Consensus 69 ~t~~~~~~~l~~~~~~Av~~~~i~~NP~~~v~~~~ 103 (118)
T 2kj8_A 69 ERANKARRRCGEVFRYAIVTGRAKYNPAPDLADAM 103 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCSCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcccCcHHHHHHHh
Confidence 34556666666777777888888877776555444
No 10
>2f6m_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomes, trafficking complex, vacuole protei sorting, ESCRT protein complexes; HET: DDQ; 2.10A {Saccharomyces cerevisiae} SCOP: a.2.17.1 PDB: 2f66_A*
Probab=22.09 E-value=2e+02 Score=19.81 Aligned_cols=34 Identities=18% Similarity=0.323 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHhhhCcchhhhHHHHHHHHHHH
Q 029900 132 KLIAEAYSVIDKAVKVGTLHRNTGARRKSRLARR 165 (185)
Q Consensus 132 ~~l~~a~S~IDKAakKGVIHKNtAARKKSRLakk 165 (185)
..+..+.=.||+|..+|+|--..=-|....|++.
T Consensus 16 ~AieDaiy~L~~aL~~g~I~l~~ylK~vR~LaRe 49 (65)
T 2f6m_A 16 YALTDTIEALSRMLHRGTIPLDTFVKQGRELARQ 49 (65)
T ss_dssp HHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 4677889999999999999988888888877763
No 11
>3t49_A SCIN-B, fibrinogen-binding protein; secreted, virulence, immune system; HET: GOL; 1.45A {Staphylococcus aureus subsp} PDB: 3t4a_G
Probab=21.02 E-value=1.4e+02 Score=21.21 Aligned_cols=46 Identities=15% Similarity=0.134 Sum_probs=27.6
Q ss_pred hhhHHHHHHHHHHHHHHHHhccCCCCCCCCccchHHHHHHHHHHHHHHHHhh
Q 029900 95 NKSRKSEVKTRMKKVLEALDGLRKKPDAQPEEVLPVEKLIAEAYSVIDKAVK 146 (185)
Q Consensus 95 Nrs~KS~vRT~iKKv~~AIeagdk~~~a~a~d~~~A~~~l~~a~S~IDKAak 146 (185)
|..+|..|.-.-=+...||..+|- ....+|+..|...|+.||.+..
T Consensus 27 n~YyKR~Imm~~y~AK~Alksknf------~kMa~AK~~LE~IY~eI~e~i~ 72 (73)
T 3t49_A 27 NPYYKRTIMMNEYRAKAALKKNDF------VSMADAKVALEKIYKEIDEIIN 72 (73)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCH------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHhccH------HHHHHHHHHHHHHHHHHHHHHh
Confidence 344444444444444556665443 2345677888899999998764
No 12
>2odm_A YLAN, UPF0358 protein MW0995; triple helix, unknown function; 2.24A {Staphylococcus aureus subsp}
Probab=20.93 E-value=1.7e+02 Score=21.60 Aligned_cols=39 Identities=23% Similarity=0.320 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHhhhCcchhhhHHHHHHHHHHHHHHH
Q 029900 131 EKLIAEAYSVIDKAVKVGTLHRNTGARRKSRLARRKKAV 169 (185)
Q Consensus 131 ~~~l~~a~S~IDKAakKGVIHKNtAARKKSRLakkin~l 169 (185)
.+.+--....||=||.-|+|..+.+-.--++|-+.++.+
T Consensus 46 DTQmfGlSrEIdFAvrlGli~~~~Gk~ll~~LE~~Ls~L 84 (91)
T 2odm_A 46 DTQMFGLQKEVDFAVKLGLVDREDGKQIMLRLEKELSKL 84 (91)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhhhHHHHHHHHHHCCccHHHHHHHHHHHHHHHHHH
Confidence 345556789999999999999999999999999988764
No 13
>3bbo_R Ribosomal protein L19; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=20.04 E-value=22 Score=30.40 Aligned_cols=38 Identities=24% Similarity=0.208 Sum_probs=0.0
Q ss_pred ccccc-chhhhcccccCCCCCCccccccceeeecccccc
Q 029900 11 CLTIQ-SKFKTLSLNNNSSSHSSFATFKSLCFSNKLSHN 48 (185)
Q Consensus 11 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 48 (185)
-|+++ +-++.|||..+..++.+.+..+|-+|+.+++..
T Consensus 27 ~l~~~~~~~~~~s~~~~~~~~~~~~~~~s~~~~~~~~~~ 65 (233)
T 3bbo_R 27 QLGFPIDSNRRFSLSSNCRSNLMVSRASSNLFSSNFSSI 65 (233)
T ss_dssp ---------------------------------------
T ss_pred hcccccccccccccccccccceEeeccccccccccccch
Confidence 34444 666777777776666666666677777777433
Done!