BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>029905
MQLEFECSNVNKWKEALASYEACVESLNKPNLISLDDYYRKELPSLIHQRNPNPHINTTE
LSKLVRWKLTRGKWRPRLLVFVSSLDDSSVKSASEKAFKSLPDLTKAVSELTVLKGVGPA
TASAVLAAYAPDLAPFMSDEAMGAALGHSKDYSLKQYLLFADKLQAKAKVSDIFFFLNIC
VYFSS

High Scoring Gene Products

Symbol, full name Information P value
AT3G12210 protein from Arabidopsis thaliana 2.5e-58
LOC100524737
Uncharacterized protein
protein from Sus scrofa 2.2e-25
zgc:112496 gene_product from Danio rerio 3.4e-22
Amun protein from Drosophila melanogaster 1.2e-21

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029905
        (185 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2082224 - symbol:AT3G12210 species:3702 "Arabi...   599  2.5e-58   1
UNIPROTKB|F1RG53 - symbol:LOC100524737 "Uncharacterized p...   288  2.2e-25   1
ZFIN|ZDB-GENE-050320-25 - symbol:zgc:112496 "zgc:112496" ...   258  3.4e-22   1
FB|FBgn0030328 - symbol:Amun "Amun" species:7227 "Drosoph...   260  1.2e-21   1
ASPGD|ASPL0000059149 - symbol:AN10183 species:162425 "Eme...   133  2.3e-08   1


>TAIR|locus:2082224 [details] [associations]
            symbol:AT3G12210 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA]
            InterPro:IPR003583 SMART:SM00278 EMBL:CP002686 GO:GO:0003677
            GO:GO:0006281 EMBL:AC069472 OMA:LMEWKLT EMBL:AY087120
            IPI:IPI00546021 RefSeq:NP_566413.1 UniGene:At.22634
            ProteinModelPortal:Q9C7D5 SMR:Q9C7D5 PRIDE:Q9C7D5 DNASU:820401
            EnsemblPlants:AT3G12210.2 GeneID:820401 KEGG:ath:AT3G12210
            ProtClustDB:CLSN2688293 Genevestigator:Q9C7D5 Uniprot:Q9C7D5
        Length = 209

 Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
 Identities = 114/169 (67%), Positives = 137/169 (81%)

Query:     1 MQLEFECSNVNKWKEALASYEACVESLNKPNLISLDDYYRKELPSLIHQRNPNPHINTTE 60
             M+LEF+CS+V  WKEAL+SY++ +ESLNKP L+SLD +YR +LP L+H R+PNP++ T+E
Sbjct:     1 MELEFKCSDVGVWKEALSSYDSRIESLNKPELVSLDQFYRIKLPCLLHDRDPNPYLTTSE 60

Query:    61 LSKLVRWKLTRGKWRPRXXXXXXXXXXXXXXXXXEKAFKSLPDLTKAVSELTVLKGVGPA 120
             LS+L++WKL+RGKWRPR                 EKAFKSLPD++KAV ELTVLKGVG A
Sbjct:    61 LSQLMKWKLSRGKWRPRLLDFVSSLDDSVVKSASEKAFKSLPDISKAVKELTVLKGVGAA 120

Query:   121 TASAVLAAYAPDLAPFMSDEAMGAALGHSKDYSLKQYLLFADKLQAKAK 169
             TASAVLAAYAPD+APFMSDEAM  ALG+SKDYSLKQYLLFA KLQ KAK
Sbjct:   121 TASAVLAAYAPDIAPFMSDEAMEVALGNSKDYSLKQYLLFATKLQDKAK 169


>UNIPROTKB|F1RG53 [details] [associations]
            symbol:LOC100524737 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0006281 "DNA repair" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] InterPro:IPR003583 SMART:SM00278
            GO:GO:0003677 GO:GO:0006281 GeneTree:ENSGT00530000064671
            EMBL:FP016225 RefSeq:XP_003124747.1 Ensembl:ENSSSCT00000008767
            GeneID:100524737 KEGG:ssc:100524737 OMA:LMEWKLT Uniprot:F1RG53
        Length = 232

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 66/165 (40%), Positives = 93/165 (56%)

Query:     7 CSNVNKWKEALASYEACVESLNKPN--LISLDDYYRKELPSLIHQRNPNPHINTTELSKL 64
             C + + W   L  +   + +   P   L +LD +YR+ LP+ I  R    H+   EL +L
Sbjct:    10 CEDPSLWAAVLGRHGEVLRARAGPQGRLEALDRWYREALPAAIEGREEK-HVTREELGQL 68

Query:    65 VRWKLTRGKWRPRXXXXXXXXXXXXXXXXXEKAFKSLPDLTKAVSELTVLKGVGPATASA 124
             + WKL RG++RPR                   AF  LPD+  AV+EL  L+GVGPATASA
Sbjct:    69 LAWKLARGRFRPRLHQLVSANAPELVVQHSAAAFPLLPDMHAAVTELRALRGVGPATASA 128

Query:   125 VLAAYAPDLAPFMSDEAMGAALG-HSKDYSLKQYLLFADKLQAKA 168
             VLAA AP++A FMS+EA+ A  G  +  Y+LK YLL+  ++Q +A
Sbjct:   129 VLAAGAPEVAAFMSEEAVAAVPGLPALQYTLKHYLLYLSRVQERA 173


>ZFIN|ZDB-GENE-050320-25 [details] [associations]
            symbol:zgc:112496 "zgc:112496" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA
            repair" evidence=IEA] InterPro:IPR003583 SMART:SM00278
            ZFIN:ZDB-GENE-050320-25 GO:GO:0003677 GO:GO:0006281 EMBL:BC091543
            IPI:IPI00485714 RefSeq:NP_001013483.1 UniGene:Dr.87779 DNASU:541336
            GeneID:541336 KEGG:dre:541336 eggNOG:NOG84702 HOGENOM:HOG000240215
            HOVERGEN:HBG054938 InParanoid:Q5BJC0 OrthoDB:EOG48KRC7
            NextBio:20879152 Uniprot:Q5BJC0
        Length = 238

 Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 65/167 (38%), Positives = 87/167 (52%)

Query:     5 FECSNVNKWKEALASYEACVE--SLNKPN----LISLDDYYRKELPSLIHQRNPNPHINT 58
             F C +   WK     Y   VE  S  K      L+ LD +++++LP+ I  R P   +  
Sbjct:     4 FTCEDPAVWKAVHNKYWTVVEAKSAGKRKTSGKLLQLDKWFQEDLPAAITAR-PERFLTH 62

Query:    59 TELSKLVRWKLTRGKWRPRXXXXXXXXXXXXXXXXXEKAFKSLPDLTKAVSELTVLKGVG 118
              EL K++ WKLT+GK+RPR                  KAF  LPD+  A+ EL  LKGVG
Sbjct:    63 AELVKIMEWKLTKGKFRPRLQQLIGSNNEEAVQSSSSKAFSLLPDVQAAIKELCKLKGVG 122

Query:   119 PATASAVLAAYAPDLAPFMSDEAMGA-ALGHSKDYSLKQYLLFADKL 164
              ATASAVL A APD   FM+DEA+ + A     +Y+ K Y L+  K+
Sbjct:   123 SATASAVLVAGAPDKVAFMADEAVESIAELRPVEYTDKHYALYLQKM 169


>FB|FBgn0030328 [details] [associations]
            symbol:Amun "Amun" species:7227 "Drosophila melanogaster"
            [GO:0035220 "wing disc development" evidence=IGI] [GO:0048749
            "compound eye development" evidence=IGI] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0022416 "chaeta development" evidence=IMP]
            GO:GO:0005634 EMBL:AE014298 GO:GO:0022416 GO:GO:0035220
            GO:GO:0048749 EMBL:BT001379 RefSeq:NP_001188579.1
            RefSeq:NP_001188580.1 RefSeq:NP_001188581.1 RefSeq:NP_001188582.1
            RefSeq:NP_572741.1 RefSeq:NP_727551.1 RefSeq:NP_727552.1
            RefSeq:NP_727553.1 RefSeq:NP_727554.1 UniGene:Dm.19556 SMR:Q9VYV4
            IntAct:Q9VYV4 MINT:MINT-878334 STRING:Q9VYV4
            EnsemblMetazoa:FBtr0073615 EnsemblMetazoa:FBtr0073616
            EnsemblMetazoa:FBtr0073617 EnsemblMetazoa:FBtr0073618
            EnsemblMetazoa:FBtr0073619 EnsemblMetazoa:FBtr0303336
            EnsemblMetazoa:FBtr0303337 EnsemblMetazoa:FBtr0303338
            EnsemblMetazoa:FBtr0303339 EnsemblMetazoa:FBtr0333796
            EnsemblMetazoa:FBtr0333797 GeneID:32123 KEGG:dme:Dmel_CG2446
            UCSC:CG2446-RA CTD:32123 FlyBase:FBgn0030328
            GeneTree:ENSGT00530000064671 InParanoid:Q9VYV4 OMA:MKWKQSR
            OrthoDB:EOG4FBG8Q GenomeRNAi:32123 NextBio:776957 Uniprot:Q9VYV4
        Length = 550

 Score = 260 (96.6 bits), Expect = 1.2e-21, P = 1.2e-21
 Identities = 59/140 (42%), Positives = 83/140 (59%)

Query:    29 KPN-LISLDDYYRKELPSLIHQRNPNPHINTTELSKLVRWKLTRGKWRPRXXXXXXXXXX 87
             KP  LI LD +Y+ ELP LI  R  + H+   EL + ++WK +RGK+ P+          
Sbjct:    40 KPQELIRLDQWYQNELPKLIKARGKDAHMVYDELVQSMKWKQSRGKFYPQLSYLVKVNTP 99

Query:    88 XXXXXXXEKAFKSLPDLTKAVSELTVLKGVGPATASAVLAAYAPDLAPFMSDEAMGAALG 147
                    +KAF+ LP+L +A++ L+ LKGVG   ASA+LAA APD APFM+DE + A   
Sbjct:   100 RAVIQETKKAFRKLPNLEQAITALSNLKGVGTTMASALLAAAAPDSAPFMADECLMAIPE 159

Query:   148 -HSKDYSLKQYLLFADKLQA 166
                 DY+ K+YL F + +QA
Sbjct:   160 IEGIDYTTKEYLNFVNHIQA 179


>ASPGD|ASPL0000059149 [details] [associations]
            symbol:AN10183 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] EMBL:BN001308 EnsemblFungi:CADANIAT00001276
            HOGENOM:HOG000208429 OMA:HGVYRPT Uniprot:C8VS43
        Length = 312

 Score = 133 (51.9 bits), Expect = 2.3e-08, P = 2.3e-08
 Identities = 34/104 (32%), Positives = 49/104 (47%)

Query:    48 HQRNPNPHINTTELSKLVRWKLTRGKWRPRXXXXXXXXXXXXXXXXXEKAFKSLPD---- 103
             ++R    H++  EL +L+ WKL  G +RP                    AF SLP     
Sbjct:   102 NERGSGGHLSREELVQLMEWKLKHGVYRPTLLGMIRQNQEKIISDTTASAFSSLPGSVEG 161

Query:   104 ------LTKAVSELTV-LKGVGPATASAVLAAYAPDLAPFMSDE 140
                   +  A+  LT  L+GVGPATAS +L+   P++ PF SD+
Sbjct:   162 KDGFEAIENALLTLTTPLRGVGPATASLILSVACPEMIPFYSDD 205


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.132   0.391    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      185       168   0.00079  108 3  11 22  0.39    32
                                                     31  0.46    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  602 (64 KB)
  Total size of DFA:  158 KB (2093 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.37u 0.14s 14.51t   Elapsed:  00:00:01
  Total cpu time:  14.37u 0.14s 14.51t   Elapsed:  00:00:01
  Start:  Fri May 10 00:07:45 2013   End:  Fri May 10 00:07:46 2013

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