Query 029908
Match_columns 185
No_of_seqs 127 out of 1030
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 05:32:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029908.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029908hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02323 probable fructokinase 100.0 4.3E-30 9.4E-35 211.1 19.2 167 2-168 161-327 (330)
2 PLN02341 pfkB-type carbohydrat 100.0 3E-29 6.5E-34 215.0 19.1 170 2-179 248-420 (470)
3 PLN02543 pfkB-type carbohydrat 100.0 2.3E-29 5E-34 215.4 18.2 163 2-171 291-492 (496)
4 PLN02967 kinase 100.0 4.6E-28 1E-32 209.6 17.9 165 2-166 360-545 (581)
5 PRK09434 aminoimidazole ribosi 100.0 5.4E-28 1.2E-32 196.3 15.7 159 2-162 144-303 (304)
6 PTZ00292 ribokinase; Provision 100.0 9.8E-28 2.1E-32 196.8 16.3 154 2-167 167-325 (326)
7 PRK11142 ribokinase; Provision 100.0 4.2E-27 9.2E-32 191.1 16.7 149 2-167 152-304 (306)
8 COG0524 RbsK Sugar kinases, ri 99.9 1.6E-26 3.5E-31 188.2 17.2 155 2-169 152-310 (311)
9 cd01167 bac_FRK Fructokinases 99.9 7.8E-27 1.7E-31 188.4 14.8 151 2-153 145-295 (295)
10 PRK13508 tagatose-6-phosphate 99.9 4.9E-26 1.1E-30 185.5 16.8 154 2-173 150-308 (309)
11 PLN02813 pfkB-type carbohydrat 99.9 4.9E-26 1.1E-30 192.9 17.2 159 2-170 249-409 (426)
12 TIGR03828 pfkB 1-phosphofructo 99.9 7.9E-26 1.7E-30 183.4 16.8 150 2-171 151-304 (304)
13 PRK09513 fruK 1-phosphofructok 99.9 1.3E-25 2.8E-30 183.3 16.9 152 2-173 155-310 (312)
14 TIGR01231 lacC tagatose-6-phos 99.9 1.9E-25 4.1E-30 182.1 16.6 153 2-172 150-307 (309)
15 cd01174 ribokinase Ribokinase 99.9 2.1E-25 4.6E-30 179.8 16.1 140 2-158 149-292 (292)
16 TIGR03168 1-PFK hexose kinase, 99.9 3E-25 6.4E-30 180.2 17.0 148 2-169 151-302 (303)
17 cd01168 adenosine_kinase Adeno 99.9 1.8E-25 3.9E-30 182.3 15.6 142 2-154 168-311 (312)
18 PLN02379 pfkB-type carbohydrat 99.9 2.5E-25 5.5E-30 185.5 16.7 155 2-170 198-356 (367)
19 PRK10294 6-phosphofructokinase 99.9 3.1E-25 6.7E-30 180.8 16.7 149 2-169 154-307 (309)
20 cd01166 KdgK 2-keto-3-deoxyglu 99.9 2.9E-25 6.2E-30 179.1 16.3 142 2-152 150-293 (294)
21 PRK09850 pseudouridine kinase; 99.9 3.6E-25 7.7E-30 180.8 16.6 148 7-169 157-309 (313)
22 cd01944 YegV_kinase_like YegV- 99.9 7.9E-25 1.7E-29 176.5 15.5 134 6-151 154-289 (289)
23 TIGR02152 D_ribokin_bact ribok 99.9 8.1E-25 1.8E-29 176.7 15.0 146 2-163 144-293 (293)
24 COG1105 FruK Fructose-1-phosph 99.9 2.1E-24 4.6E-29 173.4 16.4 153 1-173 152-308 (310)
25 cd01945 ribokinase_group_B Rib 99.9 4.6E-25 1E-29 177.3 12.7 139 2-158 145-284 (284)
26 cd01943 MAK32 MAK32 kinase. M 99.9 1.2E-24 2.6E-29 179.0 14.5 157 7-176 153-326 (328)
27 PRK15074 inosine/guanosine kin 99.9 2E-24 4.4E-29 182.7 15.1 154 2-161 214-425 (434)
28 TIGR02198 rfaE_dom_I rfaE bifu 99.9 3E-24 6.5E-29 175.1 15.5 143 2-166 167-314 (315)
29 PTZ00247 adenosine kinase; Pro 99.9 2.5E-24 5.5E-29 178.0 15.3 142 2-154 182-336 (345)
30 cd01942 ribokinase_group_A Rib 99.9 2.3E-24 5E-29 172.7 14.0 132 2-152 143-278 (279)
31 cd01172 RfaE_like RfaE encodes 99.9 1.8E-24 3.9E-29 175.4 13.2 135 2-156 158-298 (304)
32 PRK09954 putative kinase; Prov 99.9 9E-24 2E-28 175.8 16.5 147 7-168 210-361 (362)
33 KOG2855 Ribokinase [Carbohydra 99.9 6.2E-24 1.3E-28 171.1 13.7 162 2-168 164-326 (330)
34 PF00294 PfkB: pfkB family car 99.9 7.6E-24 1.6E-28 171.1 12.7 124 28-158 172-300 (301)
35 cd01164 FruK_PfkB_like 1-phosp 99.9 5.5E-23 1.2E-27 165.9 15.1 132 2-152 152-288 (289)
36 cd01940 Fructoselysine_kinase_ 99.9 5.3E-23 1.1E-27 163.8 14.3 131 2-152 132-263 (264)
37 PLN02548 adenosine kinase 99.9 7.7E-23 1.7E-27 168.2 15.6 142 2-154 171-325 (332)
38 cd01947 Guanosine_kinase_like 99.9 5.5E-23 1.2E-27 163.9 14.1 127 2-152 138-264 (265)
39 PLN02630 pfkB-type carbohydrat 99.9 1E-22 2.2E-27 167.8 15.5 143 7-172 152-295 (335)
40 PRK11316 bifunctional heptose 99.9 1.7E-22 3.6E-27 173.6 15.3 145 2-168 165-314 (473)
41 PRK09813 fructoselysine 6-kina 99.9 1E-22 2.2E-27 162.1 12.4 129 2-152 130-259 (260)
42 cd01946 ribokinase_group_C Rib 99.9 1.7E-22 3.8E-27 162.1 13.5 143 2-153 133-276 (277)
43 cd01941 YeiC_kinase_like YeiC- 99.9 2.2E-22 4.7E-27 162.0 13.1 132 2-148 148-287 (288)
44 cd01173 pyridoxal_pyridoxamine 99.9 2.7E-21 5.9E-26 153.6 14.5 141 2-149 95-251 (254)
45 cd01937 ribokinase_group_D Rib 99.9 1.9E-21 4.2E-26 154.1 13.5 129 6-148 126-254 (254)
46 PRK12413 phosphomethylpyrimidi 99.9 3.6E-21 7.8E-26 152.8 15.1 138 6-150 95-243 (253)
47 cd01939 Ketohexokinase Ketohex 99.9 1.3E-21 2.9E-26 158.0 12.0 124 9-152 160-289 (290)
48 TIGR00097 HMP-P_kinase phospho 99.9 2.2E-20 4.7E-25 148.6 15.8 141 2-150 87-241 (254)
49 PRK05756 pyridoxamine kinase; 99.9 1.8E-20 4E-25 151.4 14.3 140 3-149 98-255 (286)
50 cd01169 HMPP_kinase 4-amino-5- 99.8 5.8E-20 1.3E-24 144.8 16.3 140 3-149 89-241 (242)
51 PRK12412 pyridoxal kinase; Rev 99.8 4.5E-20 9.8E-25 147.9 15.2 141 2-149 92-246 (268)
52 PRK06427 bifunctional hydroxy- 99.8 8.9E-20 1.9E-24 145.9 15.1 141 2-150 93-249 (266)
53 PRK08573 phosphomethylpyrimidi 99.8 1.7E-19 3.6E-24 154.1 17.7 140 2-149 91-244 (448)
54 PRK07105 pyridoxamine kinase; 99.8 7.4E-20 1.6E-24 147.7 14.6 141 4-152 100-258 (284)
55 cd00287 ribokinase_pfkB_like r 99.8 4.9E-20 1.1E-24 140.1 12.1 114 2-120 78-196 (196)
56 TIGR00687 pyridox_kin pyridoxa 99.8 1.6E-19 3.4E-24 146.0 14.1 138 3-148 98-255 (286)
57 PRK08176 pdxK pyridoxal-pyrido 99.8 5.5E-19 1.2E-23 142.5 14.8 135 7-149 118-266 (281)
58 PRK12616 pyridoxal kinase; Rev 99.8 9.2E-19 2E-23 140.5 15.0 140 3-149 95-249 (270)
59 KOG2854 Possible pfkB family c 99.8 1.1E-17 2.3E-22 134.1 12.2 139 4-153 184-335 (343)
60 COG2870 RfaE ADP-heptose synth 99.7 1.1E-17 2.4E-22 136.9 10.6 142 1-164 164-309 (467)
61 PTZ00344 pyridoxal kinase; Pro 99.7 2.1E-16 4.5E-21 128.4 15.2 137 4-150 102-259 (296)
62 PTZ00347 phosphomethylpyrimidi 99.7 3.5E-16 7.7E-21 135.5 15.0 135 8-149 323-478 (504)
63 PLN02898 HMP-P kinase/thiamin- 99.7 4.9E-16 1.1E-20 134.6 15.4 141 3-150 99-254 (502)
64 PF08543 Phos_pyr_kin: Phospho 99.7 3.3E-16 7.1E-21 124.2 13.0 140 3-149 81-234 (246)
65 COG0351 ThiD Hydroxymethylpyri 99.7 9.3E-16 2E-20 120.9 14.9 139 3-148 93-244 (263)
66 PLN02978 pyridoxal kinase 99.7 4.3E-15 9.3E-20 121.4 15.4 134 7-149 116-267 (308)
67 PRK14713 multifunctional hydro 99.6 4E-15 8.7E-20 129.6 14.9 132 8-148 125-271 (530)
68 PRK09517 multifunctional thiam 99.6 3.5E-15 7.5E-20 134.6 14.2 141 3-150 331-485 (755)
69 cd01171 YXKO-related B.subtili 99.5 1.4E-13 3.1E-18 109.3 11.4 131 2-149 98-235 (254)
70 cd01170 THZ_kinase 4-methyl-5- 99.5 1.5E-12 3.2E-17 103.0 14.5 133 3-148 74-221 (242)
71 PTZ00493 phosphomethylpyrimidi 99.5 2.4E-12 5.2E-17 105.2 14.0 132 10-149 107-285 (321)
72 TIGR00196 yjeF_cterm yjeF C-te 99.4 1.5E-12 3.3E-17 104.6 12.5 148 2-168 113-268 (272)
73 COG2240 PdxK Pyridoxal/pyridox 99.4 2.1E-12 4.6E-17 102.6 12.9 132 8-148 104-249 (281)
74 KOG2947 Carbohydrate kinase [C 99.4 5.6E-13 1.2E-17 103.0 9.0 129 7-152 164-298 (308)
75 PRK09355 hydroxyethylthiazole 99.2 2.3E-10 4.9E-15 91.6 13.2 131 3-146 79-223 (263)
76 TIGR00694 thiM hydroxyethylthi 99.2 3.9E-10 8.4E-15 89.6 12.3 133 2-147 73-219 (249)
77 KOG2598 Phosphomethylpyrimidin 99.1 5.2E-09 1.1E-13 87.0 13.5 169 8-183 119-333 (523)
78 KOG2599 Pyridoxal/pyridoxine/p 99.0 7.2E-09 1.6E-13 81.5 10.7 132 7-143 111-257 (308)
79 PF02110 HK: Hydroxyethylthiaz 98.4 9.1E-06 2E-10 64.3 13.5 128 2-142 73-214 (246)
80 KOG3009 Predicted carbohydrate 98.3 1.7E-06 3.7E-11 72.9 7.4 132 4-149 446-600 (614)
81 COG2145 ThiM Hydroxyethylthiaz 98.1 7.6E-05 1.6E-09 58.9 12.5 118 2-124 79-209 (265)
82 PRK10565 putative carbohydrate 98.0 8.4E-05 1.8E-09 64.9 10.9 119 3-141 342-467 (508)
83 PF01256 Carb_kinase: Carbohyd 97.7 0.00065 1.4E-08 53.8 10.9 142 3-167 89-241 (242)
84 COG0063 Predicted sugar kinase 96.1 0.22 4.8E-06 40.4 12.7 93 40-140 154-251 (284)
85 KOG3974 Predicted sugar kinase 95.6 0.086 1.9E-06 42.0 8.1 114 1-120 125-241 (306)
86 PRK14038 ADP-dependent glucoki 88.7 3 6.4E-05 36.1 8.2 115 5-167 256-388 (453)
87 PRK14039 ADP-dependent glucoki 86.8 9.4 0.0002 33.2 10.0 68 7-78 251-331 (453)
88 TIGR02045 P_fruct_ADP ADP-spec 78.5 44 0.00096 29.0 11.0 117 7-166 249-381 (446)
89 PRK03979 ADP-specific phosphof 78.1 42 0.00092 29.3 10.8 119 6-167 262-396 (463)
90 PF11469 Ribonucleas_3_2: Ribo 65.7 11 0.00023 25.9 3.4 33 102-140 53-85 (120)
91 PRK10076 pyruvate formate lyas 63.1 35 0.00076 26.4 6.5 65 2-74 61-131 (213)
92 PF13808 DDE_Tnp_1_assoc: DDE_ 59.5 48 0.001 21.8 7.8 60 108-174 22-81 (90)
93 PRK03979 ADP-specific phosphof 57.5 7.1 0.00015 34.0 1.9 31 91-121 424-455 (463)
94 PF04587 ADP_PFK_GK: ADP-speci 57.4 23 0.0005 30.7 5.0 45 6-54 248-292 (444)
95 PHA00438 hypothetical protein 49.1 15 0.00033 23.6 2.0 19 102-120 44-62 (81)
96 PF10911 DUF2717: Protein of u 45.3 19 0.00041 23.2 1.9 19 102-120 44-62 (77)
97 TIGR00444 mazG MazG family pro 41.0 1.4E+02 0.003 23.8 6.7 56 107-169 185-247 (248)
98 TIGR02045 P_fruct_ADP ADP-spec 39.2 20 0.00043 31.1 1.8 29 91-119 410-439 (446)
99 TIGR00334 5S_RNA_mat_M5 ribonu 39.0 62 0.0013 24.4 4.2 55 4-64 45-102 (174)
100 COG3684 LacD Tagatose-1,6-bisp 35.9 66 0.0014 26.0 4.1 135 2-170 154-301 (306)
101 PRK14039 ADP-dependent glucoki 34.8 26 0.00057 30.5 1.9 28 93-120 419-447 (453)
102 PF13986 DUF4224: Domain of un 33.7 58 0.0013 18.8 2.7 35 43-78 2-36 (47)
103 KOG0614 cGMP-dependent protein 33.1 1.1E+02 0.0023 27.6 5.2 44 69-113 182-226 (732)
104 PF04587 ADP_PFK_GK: ADP-speci 32.7 40 0.00087 29.3 2.7 19 100-118 424-442 (444)
105 PF11167 DUF2953: Protein of u 32.6 33 0.00071 20.1 1.5 19 104-122 2-20 (53)
106 TIGR03128 RuMP_HxlA 3-hexulose 32.1 1.9E+02 0.0042 21.6 6.2 36 2-45 96-133 (206)
107 TIGR02826 RNR_activ_nrdG3 anae 31.9 1E+02 0.0022 22.3 4.3 40 2-50 82-121 (147)
108 PRK09562 mazG nucleoside triph 31.1 2.2E+02 0.0047 22.9 6.4 60 106-172 193-259 (262)
109 cd05014 SIS_Kpsf KpsF-like pro 28.7 1.2E+02 0.0026 20.5 4.2 35 64-98 68-102 (128)
110 PRK12399 tagatose 1,6-diphosph 28.3 1.9E+02 0.0041 24.1 5.7 140 2-168 149-315 (324)
111 PRK13575 3-dehydroquinate dehy 27.0 2.8E+02 0.0061 21.8 6.4 74 3-84 120-200 (238)
112 cd00086 homeodomain Homeodomai 26.2 83 0.0018 18.1 2.6 26 155-183 23-48 (59)
113 PF01212 Beta_elim_lyase: Beta 25.7 38 0.00083 27.5 1.3 15 2-16 152-166 (290)
114 COG1180 PflA Pyruvate-formate 24.7 1.1E+02 0.0023 24.5 3.7 64 2-73 106-175 (260)
115 PF02603 Hpr_kinase_N: HPr Ser 24.7 57 0.0012 22.9 1.9 43 38-80 48-91 (127)
116 smart00642 Aamy Alpha-amylase 24.6 47 0.001 24.5 1.5 19 1-19 76-94 (166)
117 PF05920 Homeobox_KN: Homeobox 24.5 68 0.0015 17.7 1.8 28 154-184 8-35 (40)
118 PF02515 CoA_transf_3: CoA-tra 24.3 83 0.0018 23.6 2.9 54 11-79 1-56 (191)
119 PLN02520 bifunctional 3-dehydr 23.6 4.9E+02 0.011 23.1 7.9 66 4-83 131-205 (529)
120 COG3033 TnaA Tryptophanase [Am 23.2 78 0.0017 27.0 2.6 44 2-46 213-266 (471)
121 COG2200 Rtn c-di-GMP phosphodi 23.0 3.8E+02 0.0082 21.1 6.7 47 2-57 143-190 (256)
122 PRK13237 tyrosine phenol-lyase 22.7 1E+02 0.0022 27.0 3.4 44 2-46 205-258 (460)
123 cd05805 MPG1_transferase GTP-m 22.5 4.3E+02 0.0094 22.6 7.2 68 6-79 166-237 (441)
124 TIGR01093 aroD 3-dehydroquinat 22.1 3.7E+02 0.0081 20.7 8.7 73 4-84 114-193 (228)
125 PF07311 Dodecin: Dodecin; In 22.1 75 0.0016 19.9 1.8 22 128-149 12-33 (66)
126 PF10930 DUF2737: Protein of u 22.1 99 0.0021 18.4 2.2 28 154-183 22-49 (54)
127 TIGR01305 GMP_reduct_1 guanosi 22.1 2E+02 0.0044 24.1 4.8 26 59-85 160-185 (343)
128 COG1519 KdtA 3-deoxy-D-manno-o 21.8 1.9E+02 0.0042 25.0 4.7 52 2-53 140-193 (419)
129 cd05831 Ribosomal_P1 Ribosomal 21.1 2.4E+02 0.0051 19.2 4.3 40 138-181 2-41 (103)
130 COG3845 ABC-type uncharacteriz 20.9 2.6E+02 0.0057 24.7 5.4 54 24-78 144-198 (501)
131 KOG0733 Nuclear AAA ATPase (VC 20.8 1.5E+02 0.0033 27.2 4.1 79 95-174 222-313 (802)
132 COG0036 Rpe Pentose-5-phosphat 20.2 1.6E+02 0.0036 23.0 3.7 32 2-43 103-136 (220)
No 1
>PLN02323 probable fructokinase
Probab=99.97 E-value=4.3e-30 Score=211.10 Aligned_cols=167 Identities=72% Similarity=1.178 Sum_probs=145.3
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEH 81 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~~ 81 (185)
+.+++.|++|++||+++...|.+....++.+.++++++|++++|++|+..+++....+.+.+.+++..|++.||||+|++
T Consensus 161 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~g~~~vvvt~G~~ 240 (330)
T PLN02323 161 KIAKEAGALLSYDPNLRLPLWPSAEAAREGIMSIWDEADIIKVSDEEVEFLTGGDDPDDDTVVKLWHPNLKLLLVTEGEE 240 (330)
T ss_pred HHHHHcCCEEEEcCCCChhhccCHHHHHHHHHHHHHhCCEEEcCHHHHHHHhCCCCccHHHHHHHHhcCCCEEEEecCCC
Confidence 56788999999999999888977777788889999999999999999999998765544444455567999999999999
Q ss_pred ceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCCHHH
Q 029908 82 GCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPTESE 161 (185)
Q Consensus 82 G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~~~~ 161 (185)
|++++++++.+++|+++++++|++||||+|+|||++++++|++...+..++++|+++|+++|+.++++.|+..++|++++
T Consensus 241 G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~Agfl~~l~~g~~~~~~~~~l~~al~~a~a~Aa~~v~~~g~~~~~~~~~~ 320 (330)
T PLN02323 241 GCRYYTKDFKGRVEGFKVKAVDTTGAGDAFVGGLLSQLAKDLSLLEDEERLREALRFANACGAITTTERGAIPALPTKEA 320 (330)
T ss_pred ceEEEeCCCceEeCCccCCCCCCCCcHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHHhccCCccCCCCHHH
Confidence 99999988778899999999999999999999999999999752223344899999999999999999999888999999
Q ss_pred HHHHHhc
Q 029908 162 ALALLKR 168 (185)
Q Consensus 162 i~~~~~~ 168 (185)
+++++++
T Consensus 321 v~~~l~~ 327 (330)
T PLN02323 321 VLKLLKK 327 (330)
T ss_pred HHHHHHH
Confidence 9988764
No 2
>PLN02341 pfkB-type carbohydrate kinase family protein
Probab=99.97 E-value=3e-29 Score=214.96 Aligned_cols=170 Identities=28% Similarity=0.394 Sum_probs=148.4
Q ss_pred hHHHHcCCeEEEcCCCCC-CCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCC--CcEEEEEc
Q 029908 2 KAAKEAGALLSYDPNLRL-PLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPN--LKLLLVTL 78 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~-~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g--~~~vvit~ 78 (185)
+.++++|++|++||+++. .+|.+.+...+.+.++++++|++++|++|+..+++.... .+.+..+...| .+.||||+
T Consensus 248 ~~Ak~~g~~V~~Dp~~~~~~~~~~~~~~~~~l~~~L~~~Dil~~Ne~Ea~~l~g~~~~-~~a~~~l~~~g~~~k~VVVTl 326 (470)
T PLN02341 248 DYAIDVGTAVFFDPGPRGKSLLVGTPDERRALEHLLRMSDVLLLTSEEAEALTGIRNP-ILAGQELLRPGIRTKWVVVKM 326 (470)
T ss_pred HHHHHcCCEEEEeCCCcccccccChHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCCH-HHHHHHHHhcCCCCCEEEEee
Confidence 568889999999999875 355545555667889999999999999999999986432 22333555555 58999999
Q ss_pred CCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCC
Q 029908 79 GEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPT 158 (185)
Q Consensus 79 G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~ 158 (185)
|++|++++++++.+++|+++++++||+||||+|+|||++++++|++ +++|+++|+++|++++++.|+..++|+
T Consensus 327 G~~Ga~~~~~~~~~~vpa~~v~vVDTtGAGDaF~Agfl~gll~G~~-------l~eal~~A~a~aA~~v~~~Ga~~~~p~ 399 (470)
T PLN02341 327 GSKGSILVTRSSVSCAPAFKVNVVDTVGCGDSFAAAIALGYIHNLP-------LVNTLTLANAVGAATAMGCGAGRNVAT 399 (470)
T ss_pred CCCCeEEEECCeeEEeCCCCcCCCCCcCccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCcCCCCCCCC
Confidence 9999999999989999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHhcCcchhhhhhhh
Q 029908 159 ESEALALLKRSTIIDKIMSWI 179 (185)
Q Consensus 159 ~~~i~~~~~~~~~~~~~~~~~ 179 (185)
++++++++++....++..+|-
T Consensus 400 ~~ev~~~l~~~~~~~~~~~~~ 420 (470)
T PLN02341 400 LEKVLELLRASNLNEDDTFWA 420 (470)
T ss_pred HHHHHHHHHhcCCCcchhHHH
Confidence 999999999999888877774
No 3
>PLN02543 pfkB-type carbohydrate kinase family protein
Probab=99.97 E-value=2.3e-29 Score=215.37 Aligned_cols=163 Identities=42% Similarity=0.640 Sum_probs=137.0
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCC------------------------
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDK------------------------ 57 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~------------------------ 57 (185)
+.|+++|++|+|||+.|+.+|.+.+...+.+.++++++|++++|++|+..|++...
T Consensus 291 ~~Ak~~G~~VsfDpN~R~~LW~~~~~~~~~i~~~l~~aDIl~~SeeEa~~Ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (496)
T PLN02543 291 ELSKKFGGLIFFDLNLPLPLWRSRDETRELIKKAWNEADIIEVSRQELEFLLDEDYYERKRNYPPQYYAESFEQTKNWRD 370 (496)
T ss_pred HHHHHCCCEEEEeCCCCccccCCHHHHHHHHHHHHHhCCEEEecHHHHHHHhCCCcccccccccchhhhhhhhhhhcccc
Confidence 57889999999999999999988778888899999999999999999999998641
Q ss_pred ---CCHHHHHHhcCCCCcEEEEEcCCCceEEEEcCceeEecCc-----ccccccCCCcchHHHHHHHHHHHc-------c
Q 029908 58 ---IDDESALSLWHPNLKLLLVTLGEHGCRYYTKSFKGAVDAF-----RVKTVDTTGAGDAFVGALLCKIVD-------D 122 (185)
Q Consensus 58 ---~~~~~~~~l~~~g~~~vvit~G~~G~~~~~~~~~~~~~~~-----~~~~~d~~GaGDaf~A~~~~~l~~-------g 122 (185)
.+.+.+..++..|++.||||.|.+|+.+++++....++.. +..++|||||||+|+|||+++|++ +
T Consensus 371 ~~~~~~~~~~~l~~~g~~~VVVT~G~~Ga~~~t~~~~g~v~~~~~~~v~~~~VDTTGAGDAF~AGfL~~Ll~~~~~~~~g 450 (496)
T PLN02543 371 YYHYTPEEIAPLWHDGLKLLLVTDGTLRIHYYTPKFDGVVVGTEDVLITPFTCDRTGSGDAVVAAIMRKLTTCPEMFEDQ 450 (496)
T ss_pred cccCCHHHHHHHHHCCCCEEEEEcCCCcEEEEECCCcccccccccccCCCCCcCCCchHHHHHHHHHHHHHhcccccccc
Confidence 1223344566679999999999999999986422222111 112489999999999999999996 4
Q ss_pred CCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCCHHHHHHHHhcCcc
Q 029908 123 QSAIEDEPRLREILKFANACGALSTTKKGAIPALPTESEALALLKRSTI 171 (185)
Q Consensus 123 ~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~~~~i~~~~~~~~~ 171 (185)
.+ +++++++|+++|+++|++.|+.+++|++++++++++++.+
T Consensus 451 ~~-------l~ealrfAnAaaAl~vt~~GA~~~lPt~~ev~~~~~~~~~ 492 (496)
T PLN02543 451 DV-------LERQLRFAVAAGIISQWTIGAVRGFPTESATQNLKEQVYV 492 (496)
T ss_pred cc-------HHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhcc
Confidence 55 9999999999999999999999999999999999999875
No 4
>PLN02967 kinase
Probab=99.96 E-value=4.6e-28 Score=209.61 Aligned_cols=165 Identities=33% Similarity=0.575 Sum_probs=133.3
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCC----------------HHHHHH
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKID----------------DESALS 65 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~----------------~~~~~~ 65 (185)
+.|+++|++|+|||++|+++|.+.+.+.+.+.++++++|||++|++|+..|++..... .+.+..
T Consensus 360 k~Ak~~Gv~VsFDpNlR~~lw~~~e~~~e~i~elL~~aDILk~NeeEl~~LtG~~~~~e~~~~~~~~~~~~~~~~e~a~~ 439 (581)
T PLN02967 360 KISKKLGGVIFYDLNLPLPLWSSSEETKSFIQEAWNLADIIEVTKQELEFLCGIEPTEEFDTKDNDKSKFVHYSPEVVAP 439 (581)
T ss_pred HHHHHCCCEEEEECCCCcccccchHHHHHHHHHHHHhCCEEEECHHHHHHHhCCCccccccccccchhccccchHHHHHH
Confidence 5788999999999999999998767778888999999999999999999999854211 122335
Q ss_pred hcCCCCcEEEEEcCCCceEEEEcCc---eeEecCcccc--cccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHH
Q 029908 66 LWHPNLKLLLVTLGEHGCRYYTKSF---KGAVDAFRVK--TVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFAN 140 (185)
Q Consensus 66 l~~~g~~~vvit~G~~G~~~~~~~~---~~~~~~~~~~--~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~ 140 (185)
++..|++.||||.|.+|+++++++. ...+|+++++ ++|||||||+|+|||+++|+++.....+..++++++++|+
T Consensus 440 l~~~g~k~VVVTlG~~Ga~~~~~~~~~~v~~~~a~~V~V~vVDTTGAGDAF~AGfL~~Ll~g~~~~~g~~~LeeaLrfAn 519 (581)
T PLN02967 440 LWHENLKVLFVTNGTSKIHYYTKEHNGAVHGMEDAPITPFTSDMSASGDGIVAGLMRMLTVQPHLITDKGYLEKTIKYAI 519 (581)
T ss_pred HHhCCCCEEEEEECccceEEEECCCceeEeeccCCCCCCCCCCCCchhHHHHHHHHHHHHhccCcccccccHHHHHHHHH
Confidence 5567999999999999999998754 3345555665 5899999999999999999984110000012999999999
Q ss_pred HHhHHHhhccCCCCCCCCHHHHHHHH
Q 029908 141 ACGALSTTKKGAIPALPTESEALALL 166 (185)
Q Consensus 141 ~~aa~~~~~~g~~~~~~~~~~i~~~~ 166 (185)
++||++++..|++.++|+++++++-.
T Consensus 520 AaAAL~vt~~GA~~glPt~~eV~~~~ 545 (581)
T PLN02967 520 DCGVIDQWLLARTRGFPPKEDMEDEV 545 (581)
T ss_pred HHHHHHhccCCCccCCCCHHHHhhhc
Confidence 99999999999999999999996543
No 5
>PRK09434 aminoimidazole riboside kinase; Provisional
Probab=99.96 E-value=5.4e-28 Score=196.35 Aligned_cols=159 Identities=43% Similarity=0.619 Sum_probs=135.7
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcC-CCCcEEEEEcCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWH-PNLKLLLVTLGE 80 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~-~g~~~vvit~G~ 80 (185)
+.++++|+++++||+.++..|.+.+...+.+.++++++|++++|++|+..+++.... .+.+.++.+ .|++.||||+|+
T Consensus 144 ~~~~~~~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~e~~~l~g~~~~-~~~~~~l~~~~g~~~vvvt~G~ 222 (304)
T PRK09434 144 RRIKAAGGFVSFDPNLREDLWQDEAELRECLRQALALADVVKLSEEELCFLSGTSQL-EDAIYALADRYPIALLLVTLGA 222 (304)
T ss_pred HHHHHcCCEEEECCCCChhhccCHHHHHHHHHHHHHhcceeeCCHHHHHHHhCCCCH-HHHHHHHHhhcCCcEEEEEecC
Confidence 567889999999999988888766778888899999999999999999999886532 122335554 688999999999
Q ss_pred CceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCCHH
Q 029908 81 HGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPTES 160 (185)
Q Consensus 81 ~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~~~ 160 (185)
+|+.++++++.+++|+++++++|++||||+|+|||+++|++|++. .++.++++++++|+++|+.++++.|+..++|+++
T Consensus 223 ~G~~~~~~~~~~~~~~~~~~~vDttGAGD~f~ag~~~~l~~g~~~-~~~~~~~~a~~~a~~~Aa~~v~~~g~~~~~~~~~ 301 (304)
T PRK09434 223 EGVLVHTRGQVQHFPAPSVDPVDTTGAGDAFVAGLLAGLSQAGLW-TDEAELAEIIAQAQACGALATTAKGAMTALPNRQ 301 (304)
T ss_pred CceEEEeCCceeEeCCCCCCCCcCCCchHHHHHHHHHHHHcCCCc-cchHHHHHHHHHHHHHHHHHHcccCCcCCCCChH
Confidence 999999988889999999999999999999999999999999720 1112399999999999999999999998888887
Q ss_pred HH
Q 029908 161 EA 162 (185)
Q Consensus 161 ~i 162 (185)
++
T Consensus 302 ~~ 303 (304)
T PRK09434 302 EL 303 (304)
T ss_pred Hc
Confidence 65
No 6
>PTZ00292 ribokinase; Provisional
Probab=99.96 E-value=9.8e-28 Score=196.77 Aligned_cols=154 Identities=34% Similarity=0.443 Sum_probs=132.2
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHH----HHHhcCCCCcEEEEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDES----ALSLWHPNLKLLLVT 77 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~----~~~l~~~g~~~vvit 77 (185)
+.++++|+++++||+++...|. .+.+.++++++|++++|++|++.+++....+.+. .+.+.+.|++.||+|
T Consensus 167 ~~a~~~g~~v~~D~~~~~~~~~-----~~~~~~~l~~~dii~~n~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvT 241 (326)
T PTZ00292 167 KEAKERGCYTVFNPAPAPKLAE-----VEIIKPFLKYVSLFCVNEVEAALITGMEVTDTESAFKASKELQQLGVENVIIT 241 (326)
T ss_pred HHHHHcCCEEEEECCCCccccc-----cccHHHHHhcCCEEcCCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCeEEEE
Confidence 4577899999999987654432 2567888899999999999999998865433222 225556799999999
Q ss_pred cCCCceEEEEcCc-eeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCC
Q 029908 78 LGEHGCRYYTKSF-KGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPAL 156 (185)
Q Consensus 78 ~G~~G~~~~~~~~-~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~ 156 (185)
+|++|+++++++. .+++|+++++++|++||||+|+|||++++++|++ +++|+++|+++|+.++++.|+..++
T Consensus 242 ~G~~Ga~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~-------~~~al~~a~a~Aa~~v~~~G~~~~~ 314 (326)
T PTZ00292 242 LGANGCLIVEKENEPVHVPGKRVKAVDTTGAGDCFVGSMAYFMSRGKD-------LKESCKRANRIAAISVTRHGTQSSY 314 (326)
T ss_pred eCCCcEEEEeCCCceEEccCCccccCCCcchHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHcCCCCccccC
Confidence 9999999988765 4889999999999999999999999999999999 9999999999999999999999889
Q ss_pred CCHHHHHHHHh
Q 029908 157 PTESEALALLK 167 (185)
Q Consensus 157 ~~~~~i~~~~~ 167 (185)
|+.+++++.++
T Consensus 315 ~~~~~~~~~~~ 325 (326)
T PTZ00292 315 PHPSELPADVK 325 (326)
T ss_pred CCHHHHHHHhc
Confidence 99999988764
No 7
>PRK11142 ribokinase; Provisional
Probab=99.95 E-value=4.2e-27 Score=191.08 Aligned_cols=149 Identities=33% Similarity=0.486 Sum_probs=129.0
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHH----HHHhcCCCCcEEEEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDES----ALSLWHPNLKLLLVT 77 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~----~~~l~~~g~~~vvit 77 (185)
+.|+++|+++++||+.... ...++++++|++++|++|+..+++....+.+. ++.+.+.|++.||+|
T Consensus 152 ~~a~~~g~~v~~d~~~~~~----------~~~~~~~~~dil~~n~~Ea~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt 221 (306)
T PRK11142 152 KIAKQHGTKVILNPAPARE----------LPDELLALVDIITPNETEAEKLTGIRVEDDDDAAKAAQVLHQKGIETVLIT 221 (306)
T ss_pred HHHHHcCCEEEEECCCCcc----------cCHHHHhhCCEEcCCHHHHHHHhCCCCCChHHHHHHHHHHHHhCCCeEEEE
Confidence 5688899999999975322 12467889999999999999999865443222 235556799999999
Q ss_pred cCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCC
Q 029908 78 LGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALP 157 (185)
Q Consensus 78 ~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~ 157 (185)
+|.+|++++++++.+++|+++++++|++||||+|+|||++++++|++ +++|+++|+++|+.++++.|+.+++|
T Consensus 222 ~G~~G~~~~~~~~~~~~~~~~v~vvDt~GAGDaF~Agfi~~l~~g~~-------~~~al~~a~~~Aa~~~~~~G~~~~~~ 294 (306)
T PRK11142 222 LGSRGVWLSENGEGQRVPGFRVQAVDTIAAGDTFNGALVTALLEGKP-------LPEAIRFAHAAAAIAVTRKGAQPSIP 294 (306)
T ss_pred ECCCcEEEEeCCcceeccCCCcccccCCCchhHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHcCCCcccccCC
Confidence 99999999988888899999999999999999999999999999999 99999999999999999999988889
Q ss_pred CHHHHHHHHh
Q 029908 158 TESEALALLK 167 (185)
Q Consensus 158 ~~~~i~~~~~ 167 (185)
++++++++++
T Consensus 295 ~~~~~~~~~~ 304 (306)
T PRK11142 295 WREEIDAFLQ 304 (306)
T ss_pred CHHHHHHHHh
Confidence 9999988775
No 8
>COG0524 RbsK Sugar kinases, ribokinase family [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1.6e-26 Score=188.25 Aligned_cols=155 Identities=41% Similarity=0.594 Sum_probs=135.2
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHH-HHhcCCCCcEEEEEcCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESA-LSLWHPNLKLLLVTLGE 80 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~-~~l~~~g~~~vvit~G~ 80 (185)
+.++++|.+|++|+++++..|. .+.+.++++++|++++|++|++.+++. ..+.... ..+...+++.+++|+|+
T Consensus 152 ~~a~~~g~~v~~d~~~~~~~~~-----~~~~~~~l~~~d~~~~n~~E~~~l~g~-~~~~~~~~~~~~~~~~~~vvvt~G~ 225 (311)
T COG0524 152 ELAKAAGVTVSFDLNPRPALWD-----RELLEELLALADILFPNEEEAELLTGL-EEDAEAAAALLLAKGVKTVVVTLGA 225 (311)
T ss_pred HHHHHcCCeEEEecCCCccccc-----hhhHHHHHhhCCEEeCCHHHHHHHhCC-CccHHHHHHHHhhcCCCEEEEEeCC
Confidence 5788999999999999988875 678888999999999999999999987 2222222 35667899999999999
Q ss_pred CceEEEEcCcee---EecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCC
Q 029908 81 HGCRYYTKSFKG---AVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALP 157 (185)
Q Consensus 81 ~G~~~~~~~~~~---~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~ 157 (185)
+|+++++.+... ..++++++++|||||||+|.|||++++++|.+ +.+++++|++++++++++.|....+|
T Consensus 226 ~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~agfl~~~~~g~~-------~~~a~~~a~a~aa~~~~~~g~~~~~p 298 (311)
T COG0524 226 EGAVVFTGGGEVTVPVPAAFKVKVVDTTGAGDAFAAGFLAGLLEGKS-------LEEALRFANAAAALAVTRPGARPSLP 298 (311)
T ss_pred CcEEEEeCCCceeeccCCCCccccccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHhhhhhccCCCCCCCC
Confidence 999999986433 33467778999999999999999999999999 99999999999999999999999999
Q ss_pred CHHHHHHHHhcC
Q 029908 158 TESEALALLKRS 169 (185)
Q Consensus 158 ~~~~i~~~~~~~ 169 (185)
+.+++..++++.
T Consensus 299 ~~~~~~~~~~~~ 310 (311)
T COG0524 299 TREEVEAFLEEL 310 (311)
T ss_pred CHHHHHHHHhcc
Confidence 999999998754
No 9
>cd01167 bac_FRK Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate. This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate.
Probab=99.95 E-value=7.8e-27 Score=188.40 Aligned_cols=151 Identities=51% Similarity=0.726 Sum_probs=128.3
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEH 81 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~~ 81 (185)
+.+++.|+++++||+.++.+|.......+.+.++++++|++++|++|+..+++....+ +..+.+.+.|++.+|||+|++
T Consensus 145 ~~~~~~g~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~d~l~~n~~E~~~l~~~~~~~-~~~~~l~~~g~~~vvvt~G~~ 223 (295)
T cd01167 145 EAAKKAGVLISFDPNLRPPLWRDEEEARERIAELLELADIVKLSDEELELLFGEEDPE-EIAALLLLFGLKLVLVTRGAD 223 (295)
T ss_pred HHHHHcCCEEEEcCCCChhhcCCHHHHHHHHHHHHHhCCEEEecHHHHHHHhCCCCHH-HHHHHHhhcCCCEEEEecCCc
Confidence 5678899999999998877787655667788899999999999999999998865432 233456678999999999999
Q ss_pred ceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCC
Q 029908 82 GCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAI 153 (185)
Q Consensus 82 G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~ 153 (185)
|++++++++.+++|+++++++|++||||+|+|+|+++|++|....++++++++|+++|+++|+.+|+++|++
T Consensus 224 G~~~~~~~~~~~~~a~~~~vvDttGAGD~f~a~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~G~~ 295 (295)
T cd01167 224 GALLYTKGGVGEVPGIPVEVVDTTGAGDAFVAGLLAQLLSRGLLALDEDELAEALRFANAVGALTCTKAGAI 295 (295)
T ss_pred ceEEEECCcceeeCCCCcceeeCCCccHHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHhhHHHhcccCCC
Confidence 999999998999999999999999999999999999999998111122229999999999999999999863
No 10
>PRK13508 tagatose-6-phosphate kinase; Provisional
Probab=99.94 E-value=4.9e-26 Score=185.51 Aligned_cols=154 Identities=21% Similarity=0.234 Sum_probs=129.1
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCC-CHHHHH----HhcCCCCcEEEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKI-DDESAL----SLWHPNLKLLLV 76 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~-~~~~~~----~l~~~g~~~vvi 76 (185)
+.++++|+++++||+. ... +.+...++++|++++|++|+..+++.... +.+++. +++..|++.|++
T Consensus 150 ~~a~~~g~~v~~D~~~--------~~~-~~~~~~~~~~dii~~n~~E~~~l~g~~~~~~~~~~~~~~~~~~~~g~~~vvv 220 (309)
T PRK13508 150 ELANQAGKPVVLDCSG--------AAL-QAVLESPYKPTVIKPNIEELSQLLGKEVSEDLDELKEVLQQPLFEGIEWIIV 220 (309)
T ss_pred HHHHHCCCEEEEECCc--------HHH-HHHHhccCCceEEccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 4678899999999973 111 22333467899999999999999986532 222222 444579999999
Q ss_pred EcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCC
Q 029908 77 TLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPAL 156 (185)
Q Consensus 77 t~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~ 156 (185)
|+|++|++++++++.+++|+++++++|++||||+|+|||+++|++|++ +++|+++|+++|++++++.+.. .
T Consensus 221 T~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~Agfi~~l~~g~~-------~~~al~~a~a~aa~~~~~~~~~--~ 291 (309)
T PRK13508 221 SLGADGAFAKHNDTFYKVDIPKIEVVNPVGSGDSTVAGIASGLLHQED-------DADLLKKANVLGMLNAQEKQTG--H 291 (309)
T ss_pred ecCCCceEEEeCCceEEEeCCCccccCCcChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCcCcC--C
Confidence 999999999988888899999999999999999999999999999999 9999999999999999999975 4
Q ss_pred CCHHHHHHHHhcCcchh
Q 029908 157 PTESEALALLKRSTIID 173 (185)
Q Consensus 157 ~~~~~i~~~~~~~~~~~ 173 (185)
.++.+++++++++++++
T Consensus 292 ~~~~~~~~~~~~i~~~~ 308 (309)
T PRK13508 292 VNMANYDELYNQIEVKE 308 (309)
T ss_pred CCHHHHHHHHhceEEEe
Confidence 78999999999988763
No 11
>PLN02813 pfkB-type carbohydrate kinase family protein
Probab=99.94 E-value=4.9e-26 Score=192.90 Aligned_cols=159 Identities=21% Similarity=0.175 Sum_probs=131.0
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCC-CCHHHHHHhcCCCCcEEEEEcCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDK-IDDESALSLWHPNLKLLLVTLGE 80 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~-~~~~~~~~l~~~g~~~vvit~G~ 80 (185)
+.++++|++|++|++..... ..........+++++|++++|++|+..|++... .+.+.+.+.+..+++.||||+|.
T Consensus 249 ~~ak~~g~~v~~d~s~~~~~---~~~~~~l~~~ll~~vDil~~Ne~Ea~~l~g~~~~~~~~~a~~~L~~~~~~VVVT~G~ 325 (426)
T PLN02813 249 EEAHRAGALVAVTASDVSCI---ERHRDDFWDVMGNYADILFANSDEARALCGLGSEESPESATRYLSHFCPLVSVTDGA 325 (426)
T ss_pred HHHHHcCCEEEEECCCcchh---hhhHHHHHHHHHhcCCEEEeCHHHHHHHhCCCCCCCHHHHHHHHHcCCCEEEEEeCC
Confidence 56788999999998742110 111123334556899999999999999988642 22333444445789999999999
Q ss_pred CceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccC-CCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCCH
Q 029908 81 HGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQ-SAIEDEPRLREILKFANACGALSTTKKGAIPALPTE 159 (185)
Q Consensus 81 ~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~-~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~~ 159 (185)
+|++++++++.+++|+++++++||+||||+|+|||++++++|. + +++++++|+++|+.++++.|++..+|+.
T Consensus 326 ~Ga~~~~~~~~~~~pa~~v~vVDTtGAGDAF~Agfl~~l~~G~~~-------l~~al~~A~a~Aa~~v~~~Ga~~~~~~~ 398 (426)
T PLN02813 326 RGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYAAGILYGLLRGVSD-------LRGMGELAARVAATVVGQQGTRLRVEDA 398 (426)
T ss_pred CCeEEEECCEEEEeCCCCCCcccCCChHHHHHHHHHHHHHcCCCC-------HHHHHHHHHHHHHHHHcccCCCcCHHHH
Confidence 9999999998999999999999999999999999999999999 9 9999999999999999999999988899
Q ss_pred HHHHHHHhcCc
Q 029908 160 SEALALLKRST 170 (185)
Q Consensus 160 ~~i~~~~~~~~ 170 (185)
+++.+.++.+.
T Consensus 399 ~e~~~~~~~~~ 409 (426)
T PLN02813 399 VELAESFALHL 409 (426)
T ss_pred HHHHHHHHHHh
Confidence 99988877654
No 12
>TIGR03828 pfkB 1-phosphofructokinase. This enzyme acts in concert with the fructose-specific phosphotransferase system (PTS) which imports fructose as fructose-1-phosphate. The action of 1-phosphofructokinase results in beta-D-fructose-1,6-bisphosphate and is an entry point into glycolysis (GenProp0688).
Probab=99.94 E-value=7.9e-26 Score=183.36 Aligned_cols=150 Identities=31% Similarity=0.349 Sum_probs=126.5
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHH----HHhcCCCCcEEEEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESA----LSLWHPNLKLLLVT 77 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~----~~l~~~g~~~vvit 77 (185)
+.++++|+++++||+. ....+ .+...+|++++|+.|++.+++....+.+++ +.+.+.|++.||+|
T Consensus 151 ~~~~~~~~~v~~D~~~--------~~~~~---~~~~~~~i~~~n~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvT 219 (304)
T TIGR03828 151 ALAREKGAKVILDTSG--------EALRD---GLKAKPFLIKPNDEELEELFGRELKTLEEIIEAARELLDLGAENVLIS 219 (304)
T ss_pred HHHHHcCCEEEEECCh--------HHHHH---HHhcCCcEECcCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 5678899999999973 11121 222457899999999999998764433332 35667899999999
Q ss_pred cCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCC
Q 029908 78 LGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALP 157 (185)
Q Consensus 78 ~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~ 157 (185)
+|.+|++++++++.+++|+++++++|++||||+|.|+|+++|++|.+ +++|+++|+++|+.++++.|+. +|
T Consensus 220 ~G~~G~~~~~~~~~~~~~~~~~~vvDttGAGDaF~a~~l~~l~~g~~-------~~~a~~~a~~~Aa~~~~~~G~~--~p 290 (304)
T TIGR03828 220 LGADGALLVTKEGALFAQPPKGEVVSTVGAGDSMVAGFLAGLESGLS-------LEEALRLAVAAGSAAAFSEGTG--LP 290 (304)
T ss_pred cCCCCcEEEcCCceEEEeCCCccccCCcChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCcCCC--CC
Confidence 99999999988888889998889999999999999999999999999 9999999999999999999974 79
Q ss_pred CHHHHHHHHhcCcc
Q 029908 158 TESEALALLKRSTI 171 (185)
Q Consensus 158 ~~~~i~~~~~~~~~ 171 (185)
+++++++++.++++
T Consensus 291 ~~~~~~~~~~~~~~ 304 (304)
T TIGR03828 291 DPEDIEELLPQVTI 304 (304)
T ss_pred CHHHHHHHHhcccC
Confidence 99999999988764
No 13
>PRK09513 fruK 1-phosphofructokinase; Provisional
Probab=99.94 E-value=1.3e-25 Score=183.26 Aligned_cols=152 Identities=19% Similarity=0.288 Sum_probs=128.2
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHH----HHhcCCCCcEEEEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESA----LSLWHPNLKLLLVT 77 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~----~~l~~~g~~~vvit 77 (185)
+.++++|.++++||+. .... ..+.++++++++|++|+..+++....+.+++ ..+.+.|++.|++|
T Consensus 155 ~~a~~~g~~v~~D~~~--------~~~~---~~~~~~~~~l~~n~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt 223 (312)
T PRK09513 155 TRLRSQCPCIIFDSSR--------EALV---AGLKAAPWLVKPNRRELEIWAGRKLPELKDVIEAAHALREQGIAHVVIS 223 (312)
T ss_pred HHHHhcCCEEEEECCh--------HHHH---HHhccCCeEEcCCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 4577789999999973 1122 2234578999999999999998765444332 25667899999999
Q ss_pred cCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCC
Q 029908 78 LGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALP 157 (185)
Q Consensus 78 ~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~ 157 (185)
+|++|++++.+++.++.++++++++|++||||+|+|||+++|++|++ +++|+++|+++|+.++.+.| .++|
T Consensus 224 ~G~~G~~~~~~~~~~~~~~~~~~~vDttGAGDaf~ag~i~~l~~g~~-------~~~a~~~A~a~Aa~~~~~~~--~~~~ 294 (312)
T PRK09513 224 LGAEGALWVNASGEWIAKPPACDVVSTVGAGDSMVGGLIYGLLMRES-------SEHTLRLATAVSALAVSQSN--VGIT 294 (312)
T ss_pred eCCCCcEEEeCCceEEecCCCccccCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhhCCC--CCCC
Confidence 99999999888877888888889999999999999999999999999 99999999999999999997 4789
Q ss_pred CHHHHHHHHhcCcchh
Q 029908 158 TESEALALLKRSTIID 173 (185)
Q Consensus 158 ~~~~i~~~~~~~~~~~ 173 (185)
+++++++++.++.+++
T Consensus 295 ~~~e~~~~l~~~~~~~ 310 (312)
T PRK09513 295 DRPQLAAMMARVDLTP 310 (312)
T ss_pred CHHHHHHHHhceEEEe
Confidence 9999999998887654
No 14
>TIGR01231 lacC tagatose-6-phosphate kinase. This enzyme is part of the tagatose-6-phosphate pathway of lactose degradation.
Probab=99.94 E-value=1.9e-25 Score=182.07 Aligned_cols=153 Identities=20% Similarity=0.218 Sum_probs=128.8
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCC-CHHHHH----HhcCCCCcEEEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKI-DDESAL----SLWHPNLKLLLV 76 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~-~~~~~~----~l~~~g~~~vvi 76 (185)
+.++++|+++++|++.+ .. +.+.+.++++|++++|++|++.+++.+.. +.+++. ++...|++.|++
T Consensus 150 ~~a~~~g~~v~~D~~~~--------~~-~~~~~~~~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~~~~~~g~~~viv 220 (309)
T TIGR01231 150 ERCQNKGVPVVLDCSGA--------TL-QTVLENPAKPTVIKPNIEELSQLLNQELTEDLESLKQALSQPLFSGIEWIIV 220 (309)
T ss_pred HHHHhCCCeEEEECChH--------HH-HHHHhccCCCeEEcCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 46788999999999842 11 23445567899999999999999986532 323322 444579999999
Q ss_pred EcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCC
Q 029908 77 TLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPAL 156 (185)
Q Consensus 77 t~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~ 156 (185)
|+|++|++++++++.+++|+++++++|++||||+|+|||+++|++|++ +++|+++|+++|++++++.++. .
T Consensus 221 T~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~agfl~~l~~g~~-------~~~a~~~a~a~aa~~~~~~~~~--~ 291 (309)
T TIGR01231 221 SLGAQGAFAKHGHTFYKVNIPTISVVNPVGSGDSTVAGITSALLNHES-------DHDLLKKANTLGMLNAQEAQTG--H 291 (309)
T ss_pred ccCCCceEEEeCCeeEEeeCCccCcCCCcchHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCcccC--C
Confidence 999999999998888899999999999999999999999999999999 9999999999999999988864 4
Q ss_pred CCHHHHHHHHhcCcch
Q 029908 157 PTESEALALLKRSTII 172 (185)
Q Consensus 157 ~~~~~i~~~~~~~~~~ 172 (185)
.++++++++++++.+.
T Consensus 292 ~~~~~~~~~~~~i~~~ 307 (309)
T TIGR01231 292 VNLNNYDDLFNQIEVL 307 (309)
T ss_pred CCHHHHHHHHhceEEE
Confidence 6899999999988765
No 15
>cd01174 ribokinase Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution.
Probab=99.94 E-value=2.1e-25 Score=179.78 Aligned_cols=140 Identities=38% Similarity=0.559 Sum_probs=122.2
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHH----HHHhcCCCCcEEEEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDES----ALSLWHPNLKLLLVT 77 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~----~~~l~~~g~~~vvit 77 (185)
+.++++|++|++||+.... ...++++++|++++|++|++.+++....+.++ ++.+.+.|++.|++|
T Consensus 149 ~~a~~~g~~v~~D~~~~~~----------~~~~~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt 218 (292)
T cd01174 149 RAARRAGVTVILNPAPARP----------LPAELLALVDILVPNETEAALLTGIEVTDEEDAEKAARLLLAKGVKNVIVT 218 (292)
T ss_pred HHHHhcCCEEEEeCCCcCc----------CcHHHHhhCCEEeeCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 5678899999999975422 12578889999999999999999876554332 235667899999999
Q ss_pred cCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCC
Q 029908 78 LGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALP 157 (185)
Q Consensus 78 ~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~ 157 (185)
+|.+|++++++++.+++|+++++++|++||||+|+|+|++++++|.+ +++|+++|+++|+.++++.|+..++|
T Consensus 219 ~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGD~F~ag~l~~l~~g~~-------~~~al~~a~~~Aa~~~~~~G~~~~~~ 291 (292)
T cd01174 219 LGAKGALLASGGEVEHVPAFKVKAVDTTGAGDTFIGALAAALARGLS-------LEEAIRFANAAAALSVTRPGAQPSIP 291 (292)
T ss_pred eCCCceEEEeCCceEEecCCCcccCCCCCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCcCCCCCCC
Confidence 99999999998888899999999999999999999999999999999 99999999999999999999998877
Q ss_pred C
Q 029908 158 T 158 (185)
Q Consensus 158 ~ 158 (185)
+
T Consensus 292 ~ 292 (292)
T cd01174 292 T 292 (292)
T ss_pred C
Confidence 4
No 16
>TIGR03168 1-PFK hexose kinase, 1-phosphofructokinase family. This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases.
Probab=99.94 E-value=3e-25 Score=180.20 Aligned_cols=148 Identities=30% Similarity=0.370 Sum_probs=126.0
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHH----HHhcCCCCcEEEEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESA----LSLWHPNLKLLLVT 77 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~----~~l~~~g~~~vvit 77 (185)
+.++++|+++++||+. .... ..+..++|++++|+.|+..+++....+.+++ +.+...|++.||||
T Consensus 151 ~~~~~~g~~v~~D~~~--------~~~~---~~~~~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vviT 219 (303)
T TIGR03168 151 AIARKRGAKVILDTSG--------EALR---EALAAKPFLIKPNHEELEELFGRELKTEEEIIEAARELLDRGAENVLVS 219 (303)
T ss_pred HHHHHCCCEEEEECCc--------HHHH---HHHhcCCcEECCCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 5678899999999973 1122 2233589999999999999998765433322 24556889999999
Q ss_pred cCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCC
Q 029908 78 LGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALP 157 (185)
Q Consensus 78 ~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~ 157 (185)
+|.+|++++++++.+++|+++++++|++||||+|+|+|++++++|.+ +.+|+++|+++|+.++++.|+. .|
T Consensus 220 ~g~~G~~~~~~~~~~~~~~~~~~~vDttGAGD~F~a~~~~~l~~g~~-------i~~a~~~A~~~aa~~~~~~G~~--~~ 290 (303)
T TIGR03168 220 LGADGALLVTKEGALKATPPKVEVVNTVGAGDSMVAGFLAGLARGLS-------LEEALRFAVAAGSAAAFSPGTG--LP 290 (303)
T ss_pred ecCCCcEEEeCCceEEeeCCcceeecCcCHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCcC--CC
Confidence 99999999998888899999999999999999999999999999999 9999999999999999999985 58
Q ss_pred CHHHHHHHHhcC
Q 029908 158 TESEALALLKRS 169 (185)
Q Consensus 158 ~~~~i~~~~~~~ 169 (185)
+++++++++.++
T Consensus 291 ~~~~~~~~~~~~ 302 (303)
T TIGR03168 291 DPEDVEELLDQV 302 (303)
T ss_pred CHHHHHHHHhhc
Confidence 999999988775
No 17
>cd01168 adenosine_kinase Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor.The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway.
Probab=99.94 E-value=1.8e-25 Score=182.27 Aligned_cols=142 Identities=25% Similarity=0.345 Sum_probs=121.1
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCC-CHHHHHHhcCCCCcEEEEEcCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKI-DDESALSLWHPNLKLLLVTLGE 80 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~-~~~~~~~l~~~g~~~vvit~G~ 80 (185)
+.++++|++|++||+... ..+...+.+.++++++|++++|++|++.|++.... ..+.+.++++.+++.||+|+|+
T Consensus 168 ~~a~~~g~~v~~d~~~~~----~~~~~~~~~~~~l~~~d~l~~n~~E~~~l~~~~~~~~~~~a~~l~~~g~~~vvvt~G~ 243 (312)
T cd01168 168 EHAKENGVKIALNLSAPF----IVQRFKEALLELLPYVDILFGNEEEAEALAEAETTDDLEAALKLLALRCRIVVITQGA 243 (312)
T ss_pred HHHHHcCCEEEEeCCcHH----HHHHHHHHHHHHHhhCCEEEeCHHHHHHHhCCCCCChHHHHHHHHhcCCCEEEEecCC
Confidence 567888999999996310 02334566788999999999999999999985222 2234457778899999999999
Q ss_pred CceEEEEcCceeEecCcc-cccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCC
Q 029908 81 HGCRYYTKSFKGAVDAFR-VKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIP 154 (185)
Q Consensus 81 ~G~~~~~~~~~~~~~~~~-~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~ 154 (185)
+|++++++++.+++|+++ ++++|++||||+|+|||++++++|++ +++|+++|+++|+++|++.|++.
T Consensus 244 ~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~ag~l~~l~~g~~-------~~~a~~~a~~~Aa~~v~~~G~~~ 311 (312)
T cd01168 244 KGAVVVEGGEVYPVPAIPVEKIVDTNGAGDAFAGGFLYGLVQGEP-------LEECIRLGSYAAAEVIQQLGPRL 311 (312)
T ss_pred CCeEEEECCEEEeCCCCCCCCcccCCchHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhccCCCC
Confidence 999999988889999998 89999999999999999999999999 99999999999999999999763
No 18
>PLN02379 pfkB-type carbohydrate kinase family protein
Probab=99.93 E-value=2.5e-25 Score=185.49 Aligned_cols=155 Identities=25% Similarity=0.277 Sum_probs=125.5
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhc--cccEEEcCHHHHhHhhCCC-CCCHHHHHHhcCCCCcEEEEEc
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWD--KAEVIKVSDVELEFLTGSD-KIDDESALSLWHPNLKLLLVTL 78 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~--~~dii~~n~~E~~~l~~~~-~~~~~~~~~l~~~g~~~vvit~ 78 (185)
+.|+++|++|++|++.... .+..++.+.++++ ++|++++|++|+..+++.. ..+.+.+.++++.+++.++||+
T Consensus 198 ~~A~~~g~~v~lD~s~~~~----v~~~r~~l~~ll~~~~vDilf~Ne~Ea~~l~~~~~~~~~~~~~~~l~~~~~~vvvT~ 273 (367)
T PLN02379 198 RLAKQEGLSVSLDLASFEM----VRNFRSPLLQLLESGKIDLCFANEDEARELLRGEQESDPEAALEFLAKYCNWAVVTL 273 (367)
T ss_pred HHHHHcCCEEEEeccchhh----hhhhhHHHHHHhhcCCccEEEcCHHHHHHHhcCCCCCCHHHHHHHHHhcCCEEEEEE
Confidence 5688999999999974211 1233556667774 8999999999999998643 2234445556667899999999
Q ss_pred CCCceEEEEcCceeEecCcc-cccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCC
Q 029908 79 GEHGCRYYTKSFKGAVDAFR-VKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALP 157 (185)
Q Consensus 79 G~~G~~~~~~~~~~~~~~~~-~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~ 157 (185)
|++|++++++++.+++|+++ .+++||+||||+|+|||++++++|++ +++|+++|+++|+.+|++.|++.
T Consensus 274 G~~Ga~~~~~~~~~~v~a~~~~~vVDTtGAGDaFaagfl~gl~~G~~-------l~~a~~~g~~aAa~vi~~~G~~~--- 343 (367)
T PLN02379 274 GSKGCIARHGKEVVRVPAIGETNAVDATGAGDLFASGFLYGLIKGLS-------LEECCKVGACSGGSVVRALGGEV--- 343 (367)
T ss_pred CCCCeEEEECCEEEEecCCCCCCcccCCChhHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHHhccCCCC---
Confidence 99999999998889999987 47999999999999999999999999 99999999999999999999873
Q ss_pred CHHHHHHHHhcCc
Q 029908 158 TESEALALLKRST 170 (185)
Q Consensus 158 ~~~~i~~~~~~~~ 170 (185)
+.++.+++.++..
T Consensus 344 ~~~~~~~~~~~~~ 356 (367)
T PLN02379 344 TPENWQWMYKQMQ 356 (367)
T ss_pred ChHHHHHHHHHHH
Confidence 5555555544433
No 19
>PRK10294 6-phosphofructokinase 2; Provisional
Probab=99.93 E-value=3.1e-25 Score=180.81 Aligned_cols=149 Identities=24% Similarity=0.306 Sum_probs=124.1
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHH----HHhcCCC-CcEEEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESA----LSLWHPN-LKLLLV 76 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~----~~l~~~g-~~~vvi 76 (185)
+.++++|++|++||+. +..+..+ .++++|++++|++|+..|++....+.+++ +++++.+ ++.|++
T Consensus 154 ~~a~~~g~~v~~D~~~--------~~~~~~~--~~~~~~~i~~n~~E~~~l~g~~~~~~~~~~~a~~~l~~~~~~~~vvv 223 (309)
T PRK10294 154 SAAQKQGIRCIIDSSG--------DALSAAL--AIGNIELVKPNQKELSALVNRDLTQPDDVRKAAQELVNSGKAKRVVV 223 (309)
T ss_pred HHHHHcCCeEEEeCCC--------HHHHHHH--hcCCCeEECCCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCCEEEE
Confidence 5678899999999962 2222211 24689999999999999998765443322 3555666 899999
Q ss_pred EcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCC
Q 029908 77 TLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPAL 156 (185)
Q Consensus 77 t~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~ 156 (185)
|.|++|++++++++.+++++++++++|++||||+|+|||+++|++|++ +.+|+++|+++|++++++.|+.+
T Consensus 224 T~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~ag~l~~l~~g~~-------~~~al~~a~a~aa~~v~~~G~~~-- 294 (309)
T PRK10294 224 SLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENAS-------LEEMVRFGVAAGSAATLNQGTRL-- 294 (309)
T ss_pred ecCCCceEEEcCCccEEEeCCCcccCCCcchHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCCCC--
Confidence 999999999988888889998999999999999999999999999999 99999999999999999999874
Q ss_pred CCHHHHHHHHhcC
Q 029908 157 PTESEALALLKRS 169 (185)
Q Consensus 157 ~~~~~i~~~~~~~ 169 (185)
..+++++++.+++
T Consensus 295 ~~~~~~~~~~~~~ 307 (309)
T PRK10294 295 CSHDDTQKIYAYL 307 (309)
T ss_pred CCHHHHHHHHHHh
Confidence 5888888888754
No 20
>cd01166 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.
Probab=99.93 E-value=2.9e-25 Score=179.06 Aligned_cols=142 Identities=39% Similarity=0.575 Sum_probs=121.8
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCC-H-HHHHHhcCCCCcEEEEEcC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKID-D-ESALSLWHPNLKLLLVTLG 79 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~-~-~~~~~l~~~g~~~vvit~G 79 (185)
+.++++|+++++||+.++..|. .+...+.+.++++++|++++|+.|++.+++....+ . +.++++ +.|++.|+||+|
T Consensus 150 ~~~~~~~~~v~~D~~~~~~~~~-~~~~~~~~~~~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~l-~~g~~~viit~G 227 (294)
T cd01166 150 EAAKARGVTVSFDLNYRPKLWS-AEEAREALEELLPYVDIVLPSEEEAEALLGDEDPTDAAERALAL-ALGVKAVVVKLG 227 (294)
T ss_pred HHHHHcCCEEEECCCCcchhcC-hHHHHHHHHHHHHhCCEEEcCHHHHHHHhCCCCchhHHHHHHhh-cCCccEEEEEEc
Confidence 4677889999999997765554 34455677889999999999999999998875421 1 112244 679999999999
Q ss_pred CCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCC
Q 029908 80 EHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGA 152 (185)
Q Consensus 80 ~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~ 152 (185)
++|+++++++..+++|+++++++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.|+
T Consensus 228 ~~G~~~~~~~~~~~~~~~~~~~vdt~GAGD~f~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~i~~~G~ 293 (294)
T cd01166 228 AEGALVYTGGGRVFVPAYPVEVVDTTGAGDAFAAGFLAGLLEGWD-------LEEALRFANAAAALVVTRPGD 293 (294)
T ss_pred CCceEEEECCceEEeCCCCcccccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhcCCC
Confidence 999999998888999999999999999999999999999999999 999999999999999999986
No 21
>PRK09850 pseudouridine kinase; Provisional
Probab=99.93 E-value=3.6e-25 Score=180.79 Aligned_cols=148 Identities=21% Similarity=0.329 Sum_probs=125.4
Q ss_pred cCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHH---H-HHhcCCCCcEEEEEcCCCc
Q 029908 7 AGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDES---A-LSLWHPNLKLLLVTLGEHG 82 (185)
Q Consensus 7 ~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~---~-~~l~~~g~~~vvit~G~~G 82 (185)
+|+++++||+.. | ....+.++++++|++++|++|+..|++....+.++ + ..+.+.|++.||||.|++|
T Consensus 157 ~g~~v~~D~~~~---~-----~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvT~G~~G 228 (313)
T PRK09850 157 ANVPVFVDPVSA---W-----KCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAWFHQHGLNRLVLSMGGDG 228 (313)
T ss_pred cCCCEEEEcCCH---H-----HHHHHHhhhccceEEccCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEEeCCce
Confidence 588999999741 1 12346778899999999999999999865433222 2 2555689999999999999
Q ss_pred eEEEEcC-ceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCCHHH
Q 029908 83 CRYYTKS-FKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPTESE 161 (185)
Q Consensus 83 ~~~~~~~-~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~~~~ 161 (185)
+++++++ +..++|+++++++|++||||+|+|+|+++|++|++ +.+|+++|+++|+.++++.++.+..|+.++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~agfi~~l~~g~~-------~~eal~~a~a~aa~~~~~~~~~~~~~~~~~ 301 (313)
T PRK09850 229 VYYSDISGESGWSAPIKTNVINVTGAGDAMMAGLASCWVDGMP-------FAESVRFAQGCSSMALSCEYTNNPDLSIAN 301 (313)
T ss_pred EEEEcCCCCeEecCCCCcccccCCCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCCCCcccCHHH
Confidence 9999854 45678888889999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHhcC
Q 029908 162 ALALLKRS 169 (185)
Q Consensus 162 i~~~~~~~ 169 (185)
+++++.+.
T Consensus 302 ~~~~~~~~ 309 (313)
T PRK09850 302 VISLVENA 309 (313)
T ss_pred HHHHHHHh
Confidence 99998754
No 22
>cd01944 YegV_kinase_like YegV-like sugar kinase. Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.
Probab=99.93 E-value=7.9e-25 Score=176.52 Aligned_cols=134 Identities=27% Similarity=0.432 Sum_probs=115.5
Q ss_pred HcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHH-HHHhcCCCCcEEEEEcCCCceE
Q 029908 6 EAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDES-ALSLWHPNLKLLLVTLGEHGCR 84 (185)
Q Consensus 6 ~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~-~~~l~~~g~~~vvit~G~~G~~ 84 (185)
+.+.++++||+++...|. .+.+.++++++|++++|++|+..|++....+... +.++...+++.|++|+|++|++
T Consensus 154 ~~~~~v~~D~~~~~~~~~-----~~~~~~~l~~~d~~~~n~~E~~~l~g~~~~~~~~~~~~~~~~~~~~vvvt~G~~Ga~ 228 (289)
T cd01944 154 PAGTTLVFDPGPRISDIP-----DTILQALMAKRPIWSCNREEAAIFAERGDPAAEASALRIYAKTAAPVVVRLGSNGAW 228 (289)
T ss_pred cCCCEEEEcCcccccccC-----HHHHHHHHhcCCEEccCHHHHHHHhCCCCcchHHHHHHHHhccCCeEEEEECCCcEE
Confidence 367999999998876554 3567888999999999999999999876543322 2356678889999999999999
Q ss_pred EEE-cCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccC
Q 029908 85 YYT-KSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKG 151 (185)
Q Consensus 85 ~~~-~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g 151 (185)
+++ ++..+++|+++++++|++||||+|+|||++++++|.+ +++|+++|+++|+.++++.|
T Consensus 229 ~~~~~~~~~~~~~~~~~vvDt~GAGDaf~ag~l~~~~~g~~-------~~~a~~~a~a~aa~~~~~~G 289 (289)
T cd01944 229 IRLPDGNTHIIPGFKVKAVDTIGAGDTHAGGMLAGLAKGMS-------LADAVLLANAAAAIVVTRSG 289 (289)
T ss_pred EEecCCCeEEecCCCCCCccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHhhhccCC
Confidence 998 4566788989999999999999999999999999999 99999999999999999876
No 23
>TIGR02152 D_ribokin_bact ribokinase. This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not.
Probab=99.93 E-value=8.1e-25 Score=176.67 Aligned_cols=146 Identities=34% Similarity=0.507 Sum_probs=123.8
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHH----HHHHhcCCCCcEEEEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDE----SALSLWHPNLKLLLVT 77 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~----~~~~l~~~g~~~vvit 77 (185)
+.++++|++|++||+.... ....++++++|++++|.+|+..+.+....+.+ ..+.+.+.|++.++||
T Consensus 144 ~~~~~~~~~v~~D~~~~~~---------~~~~~~~~~~d~l~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt 214 (293)
T TIGR02152 144 KIAKKHGVKVILNPAPAIK---------DLDDELLSLVDIITPNETEAEILTGIEVTDEEDAEKAAEKLLEKGVKNVIIT 214 (293)
T ss_pred HHHHHcCCEEEEECCcCcc---------cchHHHHhcCCEEccCHHHHHHHhCCCCCCcchHHHHHHHHHHcCCCeEEEE
Confidence 4677889999999975321 11256788999999999999999887533221 2235666799999999
Q ss_pred cCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCC
Q 029908 78 LGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALP 157 (185)
Q Consensus 78 ~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~ 157 (185)
.|.+|+.+++++..+++|+++++++|++||||+|+|||++++++|++ +++++++|+.+|+.++++.|+...+|
T Consensus 215 ~G~~g~~~~~~~~~~~~~~~~~~~vdt~GAGDaf~Ag~l~~l~~g~~-------~~~al~~a~~~Aa~~~~~~G~~~~~~ 287 (293)
T TIGR02152 215 LGSKGALLVSKDESKLIPAFKVKAVDTTAAGDTFNGAFAVALAEGKS-------LEDAIRFANAAAAISVTRKGAQSSIP 287 (293)
T ss_pred eCCCceEEEeCCceeEccCCCCceeCCCCcHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHHcccCcccCCC
Confidence 99999999999888899999999999999999999999999999999 99999999999999999999987788
Q ss_pred CHHHHH
Q 029908 158 TESEAL 163 (185)
Q Consensus 158 ~~~~i~ 163 (185)
++++++
T Consensus 288 ~~~~~~ 293 (293)
T TIGR02152 288 YLEEVE 293 (293)
T ss_pred ChHHcC
Confidence 877763
No 24
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=99.93 E-value=2.1e-24 Score=173.43 Aligned_cols=153 Identities=27% Similarity=0.407 Sum_probs=135.6
Q ss_pred ChHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHH----HhcCCCCcEEEE
Q 029908 1 MKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESAL----SLWHPNLKLLLV 76 (185)
Q Consensus 1 l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~----~l~~~g~~~vvi 76 (185)
++.++++|++|++|.+ .+.+.+.+.. .+++|+||.+|++.+++.+..+.++.. +++..|+++|+|
T Consensus 152 i~~~~~~g~~vilD~S--------g~~L~~~L~~---~P~lIKPN~~EL~~~~g~~~~~~~d~i~~a~~l~~~g~~~ViV 220 (310)
T COG1105 152 IRILRQQGAKVILDTS--------GEALLAALEA---KPWLIKPNREELEALFGRELTTLEDVIKAARELLAEGIENVIV 220 (310)
T ss_pred HHHHHhcCCeEEEECC--------hHHHHHHHcc---CCcEEecCHHHHHHHhCCCCCChHHHHHHHHHHHHCCCCEEEE
Confidence 3678999999999987 3444444443 589999999999999999987654432 677899999999
Q ss_pred EcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCC
Q 029908 77 TLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPAL 156 (185)
Q Consensus 77 t~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~ 156 (185)
|+|..|+++.+++..++..+|++++++++||||+++|||+++++++++ +++++++|+++++.++.+.|. +.
T Consensus 221 SlG~~Gal~~~~~~~~~a~~p~~~vvstVGAGDs~VAGf~~~~~~~~~-------~e~~l~~avA~g~a~~~~~~~--~~ 291 (310)
T COG1105 221 SLGADGALLVTAEGVYFASPPKVQVVSTVGAGDSMVAGFLAGLLKGKS-------LEEALRFAVACGAAAASQKGT--GI 291 (310)
T ss_pred EecCcccEEEccCCeEEEeCCCcceecCcCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhhcCCC--CC
Confidence 999999999999999999999999999999999999999999999999 999999999999999999986 57
Q ss_pred CCHHHHHHHHhcCcchh
Q 029908 157 PTESEALALLKRSTIID 173 (185)
Q Consensus 157 ~~~~~i~~~~~~~~~~~ 173 (185)
+++++++++..++.+++
T Consensus 292 ~~~~~~~~~~~~v~v~~ 308 (310)
T COG1105 292 PDLDQLKKIYAQVTVEK 308 (310)
T ss_pred CCHHHHHHHhhheEEEe
Confidence 89999999999988764
No 25
>cd01945 ribokinase_group_B Ribokinase-like subgroup B. Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. .
Probab=99.93 E-value=4.6e-25 Score=177.27 Aligned_cols=139 Identities=34% Similarity=0.397 Sum_probs=119.2
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEH 81 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~~ 81 (185)
+.++++|.++++|+++.+ ..+ +.++++++|++++|++|++.+++.... +....+.+.+++.||||+|++
T Consensus 145 ~~~~~~g~~v~~~~~~~~--------~~~-~~~~~~~~dil~~n~~e~~~l~~~~~~--~~~~~l~~~~~~~vivt~G~~ 213 (284)
T cd01945 145 QEARARGIPIPLDLDGGG--------LRV-LEELLPLADHAICSENFLRPNTGSADD--EALELLASLGIPFVAVTLGEA 213 (284)
T ss_pred HHHHHcCCCeeEeccCCc--------ccc-hHHHhccCCEEEeChhHHhhhcCCCHH--HHHHHHHhcCCcEEEEEECCC
Confidence 567889998887775432 122 677889999999999999999876432 334456678999999999999
Q ss_pred ceEEEE-cCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCC
Q 029908 82 GCRYYT-KSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPT 158 (185)
Q Consensus 82 G~~~~~-~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~ 158 (185)
|+++++ +++.+++|+++++++|++||||+|+|||+++|++|++ +++++++|+++|+.++++.|+..++|+
T Consensus 214 G~~~~~~~~~~~~~~~~~~~vvDt~GAGDaf~ag~l~~l~~g~~-------~~~al~~a~~~Aa~~~~~~G~~~~~~~ 284 (284)
T cd01945 214 GCLWLERDGELFHVPAFPVEVVDTTGAGDVFHGAFAHALAEGMP-------LREALRFASAAAALKCRGLGGRAGLPT 284 (284)
T ss_pred CeEEEcCCCCEEecCCCccccccCCCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhccCCcccCCC
Confidence 999998 6778899999999999999999999999999999999 999999999999999999999887774
No 26
>cd01943 MAK32 MAK32 kinase. MAK32 is a protein found primarily in fungi that is necessary for the structural stability of L-A particles. The L-A virus particule is a specialized compartment for the transcription and replication of double-stranded RNA, known to infect yeast and other fungi. MAK32 is part of the host machinery used by the virus to multiply.
Probab=99.92 E-value=1.2e-24 Score=179.02 Aligned_cols=157 Identities=18% Similarity=0.260 Sum_probs=128.2
Q ss_pred cCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCH---H--HH----H---HhcCCCCcEE
Q 029908 7 AGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDD---E--SA----L---SLWHPNLKLL 74 (185)
Q Consensus 7 ~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~---~--~~----~---~l~~~g~~~v 74 (185)
++.++++||++... .....+.+.++++++|++++|++|+..+++....+. + .. . ++...+++.|
T Consensus 153 ~g~~~~~d~~~~~~----~~~~~~~l~~~l~~~dil~~n~~Ea~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v 228 (328)
T cd01943 153 TRPKIVWEPLPDSC----DPENLEDLLQALPRVDVFSPNLEEAARLLGLPTSEPSSDEEKEAVLQALLFSGILQDPGGGV 228 (328)
T ss_pred CccEEEEecCCccc----ChhhHHHHHHHhccCCEECCCHHHHHHHhCCCCCCccchhhhhhhHHHHHHHhhhccCCCEE
Confidence 78899999874211 112345678999999999999999999998754321 1 11 1 1245789999
Q ss_pred EEEcCCCceEEEE--cCceeEecCccc---ccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhc
Q 029908 75 LVTLGEHGCRYYT--KSFKGAVDAFRV---KTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTK 149 (185)
Q Consensus 75 vit~G~~G~~~~~--~~~~~~~~~~~~---~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~ 149 (185)
|||+|++|+++++ ++..+++|++++ +++|++||||+|+|||+++|++|++ +++|+++|+++|++++++
T Consensus 229 vvt~G~~Ga~~~~~~~~~~~~~p~~~v~~~~vvDttGAGDaF~agfl~~l~~g~~-------~~~al~~a~a~Aa~~v~~ 301 (328)
T cd01943 229 VLRCGKLGCYVGSADSGPELWLPAYHTKSTKVVDPTGGGNSFLGGFAAGLALTKS-------IDEACIYGSVAASFAIEQ 301 (328)
T ss_pred EEEeCCCCCEEEecCCCceEecCCccCCCCcccCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcc
Confidence 9999999999998 456788999888 8999999999999999999999999 999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHhcCcchhhhh
Q 029908 150 KGAIPALPTESEALALLKRSTIIDKIM 176 (185)
Q Consensus 150 ~g~~~~~~~~~~i~~~~~~~~~~~~~~ 176 (185)
.|.. ..++++-+++|+..++++|+.
T Consensus 302 ~G~~--~~~~~~~~~~~~~~~~~~~~~ 326 (328)
T cd01943 302 VGLP--RLTKVEGEELWNGETVEERLK 326 (328)
T ss_pred CCCC--cccCCCcccccCCCCHHHHHh
Confidence 9963 347788889999999888854
No 27
>PRK15074 inosine/guanosine kinase; Provisional
Probab=99.92 E-value=2e-24 Score=182.72 Aligned_cols=154 Identities=19% Similarity=0.233 Sum_probs=117.1
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHH-HhcCCCCcEEEEEcCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESAL-SLWHPNLKLLLVTLGE 80 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~-~l~~~g~~~vvit~G~ 80 (185)
+.|+++|++|++||+.+...+...+.+. ..+++++|++++|++|+..|++..+ .+++. .+. .+++.|+||.|+
T Consensus 214 ~~Ake~G~~VslD~s~~~~v~~~~~~~~---e~l~~~vDILf~NeeEa~~LtG~~d--~eea~~~L~-~~~~~VVVTlG~ 287 (434)
T PRK15074 214 EYAKKHNVPVVLTLGTKFVIEDNPQWWQ---EFLKEHVSILAMNEDEAEALTGESD--PLLASDKAL-DWVDLVLCTAGP 287 (434)
T ss_pred HHHHHcCCEEEEECcchhhccccHHHHH---HHHHhcCCEEEcCHHHHHHHhCCCC--HHHHHHHHH-cCCCEEEEEECC
Confidence 5688999999999997654443222222 3455799999999999999998643 33343 444 468999999999
Q ss_pred CceEEEEcCc-------e--------------------------------eEecCc---ccccccCCCcchHHHHHHHHH
Q 029908 81 HGCRYYTKSF-------K--------------------------------GAVDAF---RVKTVDTTGAGDAFVGALLCK 118 (185)
Q Consensus 81 ~G~~~~~~~~-------~--------------------------------~~~~~~---~~~~~d~~GaGDaf~A~~~~~ 118 (185)
+|++++..++ . .++|++ +++++|||||||+|+|||+|+
T Consensus 288 ~Ga~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vDttGAGD~f~~gfl~~ 367 (434)
T PRK15074 288 IGLYMAGYTEDEAKRETQHPLLPGAIAEFNRYEFSRAMRKKDCQNPLRVYSHIAPYMGGPEKIMNTNGAGDGALSALLHD 367 (434)
T ss_pred CCEEEEecccccccCceeeeccccccccccchhcccchhccccccccccccccCcccCCCCcceeCCCcHHHHHHHHHHH
Confidence 9999975221 1 277887 778999999999999999999
Q ss_pred HHccC-C------------CCCChHHHHHHHHHHHHHhHHHhhccCC--CCCCCCHHH
Q 029908 119 IVDDQ-S------------AIEDEPRLREILKFANACGALSTTKKGA--IPALPTESE 161 (185)
Q Consensus 119 l~~g~-~------------~~~~~~~~~~a~~~a~~~aa~~~~~~g~--~~~~~~~~~ 161 (185)
|++|. + .++++.++.+|+++|+.+|+.++++.|+ ..++|++++
T Consensus 368 l~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~vi~~~G~~~~~~~p~~~~ 425 (434)
T PRK15074 368 ITANSYHRSNVPNSSKHKRTYLTYSSLAQVCKYANRVSYEVLNQHSPRLSRGLPERED 425 (434)
T ss_pred HHCCCcccccccccccccccccccCCHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccc
Confidence 99997 1 1112234999999999999999999999 456777543
No 28
>TIGR02198 rfaE_dom_I rfaE bifunctional protein, domain I. RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. The longer, N-terminal domain I (this family) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (TIGR02199) adds ADP to yield ADP-D-glycero-D-manno-heptose.
Probab=99.92 E-value=3e-24 Score=175.12 Aligned_cols=143 Identities=27% Similarity=0.315 Sum_probs=119.4
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCC--H-HHHHHhc-CCCCcEEEEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKID--D-ESALSLW-HPNLKLLLVT 77 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~--~-~~~~~l~-~~g~~~vvit 77 (185)
+.++++|++|++||+.+. .+.++++|++++|++|++.|++..... . +.+.+++ ..|++.||||
T Consensus 167 ~~a~~~g~~v~~D~~~~~-------------~~~~~~~d~l~~n~~E~~~l~~~~~~~~~~~~~~~~l~~~~g~~~vivT 233 (315)
T TIGR02198 167 AAARKHGKPVLVDPKGKD-------------FSRYRGATLITPNRKEAEAAVGACDTEAELVQAAEKLLEELDLEALLVT 233 (315)
T ss_pred HHHHhcCCCEEEeCCCcc-------------hhhcCCCcEECCCHHHHHHHhCCCCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 568889999999998531 134679999999999999999842211 1 1222444 3689999999
Q ss_pred cCCCceEEEEc-CceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCC
Q 029908 78 LGEHGCRYYTK-SFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPAL 156 (185)
Q Consensus 78 ~G~~G~~~~~~-~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~ 156 (185)
.|++|++++++ +..+++|+++++++|++||||+|.|||++++++|++ +++|+++|+++|+.++++.|+..
T Consensus 234 ~G~~G~~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~ag~~~~l~~g~~-------~~~al~~A~~~aa~~~~~~G~~~-- 304 (315)
T TIGR02198 234 RSEKGMTLFTREGEPIHIPAQAREVYDVTGAGDTVIATLALALAAGAS-------LEEACRLANAAAGVVVGKLGTAT-- 304 (315)
T ss_pred cCCCCeEEEecCCCeEEecCCCCCCCCCcCccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHhhhhhccCCCCC--
Confidence 99999999884 578889999999999999999999999999999999 99999999999999999999874
Q ss_pred CCHHHHHHHH
Q 029908 157 PTESEALALL 166 (185)
Q Consensus 157 ~~~~~i~~~~ 166 (185)
++++++++.+
T Consensus 305 ~~~~~~~~~~ 314 (315)
T TIGR02198 305 VSPAELANAL 314 (315)
T ss_pred CCHHHHHHHh
Confidence 6899998765
No 29
>PTZ00247 adenosine kinase; Provisional
Probab=99.92 E-value=2.5e-24 Score=178.04 Aligned_cols=142 Identities=20% Similarity=0.252 Sum_probs=116.2
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCC---CCCHHHHH-HhcC------CCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSD---KIDDESAL-SLWH------PNL 71 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~---~~~~~~~~-~l~~------~g~ 71 (185)
+.++++|++|++|++.. .+ .....+.+.++++++|++++|++|++.|++.. ..+.+.+. .+.+ .++
T Consensus 182 ~~a~~~g~~v~~d~~~~--~~--~~~~~~~~~~~l~~~Dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~~~~~~~~~ 257 (345)
T PTZ00247 182 KHARESGKLFCLNLSAP--FI--SQFFFERLLQVLPYVDILFGNEEEAKTFAKAMKWDTEDLKEIAARIAMLPKYSGTRP 257 (345)
T ss_pred HHHHHcCCEEEEECCcH--HH--HHHHHHHHHHHHhhCCEEEeCHHHHHHHhhccCCCccCHHHHHHHHHhccccccCCC
Confidence 57889999999998631 11 12334567889999999999999999999832 12222222 3322 357
Q ss_pred cEEEEEcCCCceEEEEcCceeEecCccc---ccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhh
Q 029908 72 KLLLVTLGEHGCRYYTKSFKGAVDAFRV---KTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTT 148 (185)
Q Consensus 72 ~~vvit~G~~G~~~~~~~~~~~~~~~~~---~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~ 148 (185)
+.||||+|++|++++++++.+++|++++ +++||+||||+|+|||+++|++|++ +++|+++|+++|+++|+
T Consensus 258 ~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~~~vVDTtGAGDaF~agfl~~l~~g~~-------~~~al~~a~~aAa~~v~ 330 (345)
T PTZ00247 258 RLVVFTQGPEPTLIATKDGVTSVPVPPLDQEKIVDTNGAGDAFVGGFLAQYANGKD-------IDRCVEAGHYSAQVIIQ 330 (345)
T ss_pred CEEEEecCCCceEEEECCEEEEEeccccCCCCccCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHh
Confidence 8999999999999999988888998887 5899999999999999999999999 99999999999999999
Q ss_pred ccCCCC
Q 029908 149 KKGAIP 154 (185)
Q Consensus 149 ~~g~~~ 154 (185)
+.|+..
T Consensus 331 ~~Ga~~ 336 (345)
T PTZ00247 331 HNGCTY 336 (345)
T ss_pred ccCCCC
Confidence 999873
No 30
>cd01942 ribokinase_group_A Ribokinase-like subgroup A. Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.
Probab=99.92 E-value=2.3e-24 Score=172.67 Aligned_cols=132 Identities=32% Similarity=0.510 Sum_probs=112.4
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHh---HhhCCCCCCHHHHHHhcCCCCcEEEEEc
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELE---FLTGSDKIDDESALSLWHPNLKLLLVTL 78 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~---~l~~~~~~~~~~~~~l~~~g~~~vvit~ 78 (185)
+.+++.|++|++||+.+...|. .+.+.++++++|++++|++|+. .+++.... . ...+++.||+|+
T Consensus 143 ~~~~~~g~~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~---~----~~~~~~~vvvt~ 210 (279)
T cd01942 143 RELAAGGITVSFDPGQELPRLS-----GEELEEILERADILFVNDYEAELLKERTGLSEA---E----LASGVRVVVVTL 210 (279)
T ss_pred HHHHHcCCeEEEcchhhhhhcc-----HHHHHHHHhhCCEEecCHHHHHHHHhhcCCChH---H----HhcCCCEEEEEE
Confidence 4566789999999987655553 3556778899999999999994 55543321 1 127899999999
Q ss_pred CCCceEEEEcCceeEecCc-ccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCC
Q 029908 79 GEHGCRYYTKSFKGAVDAF-RVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGA 152 (185)
Q Consensus 79 G~~G~~~~~~~~~~~~~~~-~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~ 152 (185)
|++|+++++++..+++|++ +++++|++||||+|+|||+++|++|.+ +++|+++|+++|+.++++.|+
T Consensus 211 G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~a~~i~~l~~g~~-------l~~al~~a~~~Aa~~~~~~G~ 278 (279)
T cd01942 211 GPKGAIVFEDGEEVEVPAVPAVKVVDTTGAGDAFRAGFLYGLLRGYD-------LEESLRLGNLAASLKVERRGA 278 (279)
T ss_pred CCCceEEEECCceEEccCcCcCCCcCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcccCC
Confidence 9999999998888999987 889999999999999999999999999 999999999999999999986
No 31
>cd01172 RfaE_like RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose. LPS plays an important role in maintaining the structural integrity of the bacterial outer membrane of gram-negative bacteria. RfaE consists of two domains, a sugar kinase domain, represented here, and a domain belonging to the cytidylyltransferase superfamily.
Probab=99.92 E-value=1.8e-24 Score=175.43 Aligned_cols=135 Identities=30% Similarity=0.370 Sum_probs=115.4
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHH----HHhc-CCCCcEEEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESA----LSLW-HPNLKLLLV 76 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~----~~l~-~~g~~~vvi 76 (185)
+.++++|++|++||+.+. .+.++++|++++|++|++.+++....+.+++ +.+. ..|++.|||
T Consensus 158 ~~a~~~~~~v~~D~~~~~-------------~~~~~~~d~l~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~g~~~vvv 224 (304)
T cd01172 158 AAARELGIPVLVDPKGRD-------------YSKYRGATLLTPNEKEAREALGDEINDDDELEAAGEKLLELLNLEALLV 224 (304)
T ss_pred HHHHhcCCCEEEeCCCcc-------------hhhccCCcEeCCCHHHHHHHhCCCCCChHHHHHHHHHHHHHhCCCeEEE
Confidence 567888999999998532 1467899999999999999998753332222 2343 368999999
Q ss_pred EcCCCceEEEE-cCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCC
Q 029908 77 TLGEHGCRYYT-KSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPA 155 (185)
Q Consensus 77 t~G~~G~~~~~-~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~ 155 (185)
|+|++|+++++ +++.+++|+++++++|++||||+|+|||+++|++|++ +++|+++|+++|+.++++.|+.+.
T Consensus 225 t~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~ag~i~~l~~g~~-------~~~al~~a~a~Aa~~~~~~g~~~~ 297 (304)
T cd01172 225 TLGEEGMTLFERDGEVQHIPALAKEVYDVTGAGDTVIATLALALAAGAD-------LEEAAFLANAAAGVVVGKVGTAPV 297 (304)
T ss_pred EcCCCccEEEcCCCcEEEecCCCCCCCCCcCccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHhheeeecCCCCCc
Confidence 99999999998 7788999999999999999999999999999999999 999999999999999999998754
Q ss_pred C
Q 029908 156 L 156 (185)
Q Consensus 156 ~ 156 (185)
+
T Consensus 298 ~ 298 (304)
T cd01172 298 T 298 (304)
T ss_pred C
Confidence 3
No 32
>PRK09954 putative kinase; Provisional
Probab=99.92 E-value=9e-24 Score=175.84 Aligned_cols=147 Identities=22% Similarity=0.252 Sum_probs=119.7
Q ss_pred cCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHH---H-HHHhcCCCCcEEEEEcCCCc
Q 029908 7 AGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDE---S-ALSLWHPNLKLLLVTLGEHG 82 (185)
Q Consensus 7 ~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~---~-~~~l~~~g~~~vvit~G~~G 82 (185)
+++++++||... ...+.+.++++++|++++|++|++.+++....+.+ . +..+.+.|++.||||+|++|
T Consensus 210 ~~~~v~~D~~~~--------~~~~~~~~~l~~~dil~~n~~Ea~~l~g~~~~~~~~~~~~~~~l~~~g~~~Vvvt~G~~G 281 (362)
T PRK09954 210 DEIPVFVDTVSE--------FKAGKIKHWLAHIHTLKPTQPELEILWGQAITSDADRNAAVNALHQQGVQQIFVYLPDES 281 (362)
T ss_pred CCCcEEEECCCH--------HHhhhhhhhhccccEEecCHHHHHHHcCCCCCCHHHHHHHHHHHHHcCCCEEEEEeCCcc
Confidence 578999998731 11234577899999999999999999986543322 2 23566789999999999999
Q ss_pred eEEEEcC-ceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCCHHH
Q 029908 83 CRYYTKS-FKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPTESE 161 (185)
Q Consensus 83 ~~~~~~~-~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~~~~ 161 (185)
++++..+ +.+++|+++++++|+|||||+|+|||++++++|.+ +++|+++|+++|++++....+...-.+.+.
T Consensus 282 ~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~Ag~l~~l~~g~~-------~~eal~~a~a~Aal~~~s~~~~~~~~~~~~ 354 (362)
T PRK09954 282 VFCSEKDGEQFLLTAPAHTTVDSFGADDGFMAGLVYSFLEGYS-------FRDSARFAMACAAISRASGSLNNPTLSADN 354 (362)
T ss_pred EEEEeCCCceEeccCCCcccccccchHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCcCCCcCCHHH
Confidence 9988754 46678888999999999999999999999999999 999999999999999776665554567888
Q ss_pred HHHHHhc
Q 029908 162 ALALLKR 168 (185)
Q Consensus 162 i~~~~~~ 168 (185)
++++++.
T Consensus 355 ~~~~~~~ 361 (362)
T PRK09954 355 ALSLVPM 361 (362)
T ss_pred HHHHhcc
Confidence 8887753
No 33
>KOG2855 consensus Ribokinase [Carbohydrate transport and metabolism]
Probab=99.91 E-value=6.2e-24 Score=171.05 Aligned_cols=162 Identities=61% Similarity=0.992 Sum_probs=141.0
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEH 81 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~~ 81 (185)
+.+++.|.-+.+||+.+.++|++....+..+..++..+|++.++.+|++.+++...... .+|++.+.+.||||.|++
T Consensus 164 ~~~~~~g~~i~~~pn~~l~l~~~~~~ne~e~~~i~~~adv~~~s~~e~~fl~~~~~~~~---~~L~~~~~k~viVTlG~k 240 (330)
T KOG2855|consen 164 KVAKNAGPAIFYDPNLRLPLWDSLEENESEIASIWNMADVIKVSSQELAFLTGIEDDKI---LKLWHMKLKLVIVTLGEK 240 (330)
T ss_pred hhhhcccccccCCCCccccccccccccHHHHHHHhhhhhcccccHHHHHHhccCccchH---HHHhccCCCEEEEEeCCC
Confidence 35667788888899999999997655555588899999999999999999998843322 488888889999999999
Q ss_pred ceEEEEcCcee-EecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCCHH
Q 029908 82 GCRYYTKSFKG-AVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPTES 160 (185)
Q Consensus 82 G~~~~~~~~~~-~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~~~ 160 (185)
|+.+++.+..- ++|+.+++++|||||||+|+|||+.+|.+| +-. ++.++++++++|+++++..++++|.++.+|.++
T Consensus 241 G~~y~tk~~~~~~v~~~~V~~VDtTGAGDsFvgal~~~L~~~-~~~-~~~~L~~~l~~A~a~~ai~v~~~Ga~~s~p~~~ 318 (330)
T KOG2855|consen 241 GCRYYTKDFKGSHVPAFKVKAVDTTGAGDSFVGALAVQLVRG-SLL-PELSLEEALRFANACGAITVQRKGAIPSMPTEK 318 (330)
T ss_pred ceEEEecCCCCCCCCCcccccccCCCchHHHHHHHHHHHhhc-ccc-chHHHHHHHHHHHHhhhHHhhccCCCccCccHH
Confidence 99999987555 999999999999999999999999999999 423 377799999999999999999999999999999
Q ss_pred HHHHHHhc
Q 029908 161 EALALLKR 168 (185)
Q Consensus 161 ~i~~~~~~ 168 (185)
++...+..
T Consensus 319 ~~~~~~~~ 326 (330)
T KOG2855|consen 319 EVQSLLKS 326 (330)
T ss_pred HHHHHhhh
Confidence 99887764
No 34
>PF00294 PfkB: pfkB family carbohydrate kinase; InterPro: IPR011611 This entry includes a variety of carbohydrate and pyrimidine kinases. The family includes phosphomethylpyrimidine kinase (2.7.4.7 from EC). This enzyme is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 1VM7_B 2ABQ_B 3GO7_B 3GO6_B 3FHY_A 4EOH_B 2YXU_A 2F7K_A 3KEU_A 2YXT_B ....
Probab=99.91 E-value=7.6e-24 Score=171.05 Aligned_cols=124 Identities=42% Similarity=0.575 Sum_probs=111.9
Q ss_pred HHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHH----HhcCCCCcEEEEEcCCCceEEEEcCceeEecC-cccccc
Q 029908 28 AREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESAL----SLWHPNLKLLLVTLGEHGCRYYTKSFKGAVDA-FRVKTV 102 (185)
Q Consensus 28 ~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~----~l~~~g~~~vvit~G~~G~~~~~~~~~~~~~~-~~~~~~ 102 (185)
..+.+.++++++|++++|++|+..+.+....+.+++. +++..|++.+++|+|.+|++++++++.+++++ ++.+++
T Consensus 172 ~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vv 251 (301)
T PF00294_consen 172 LREDLKELLPYADILKPNEEEAEALTGSKIDDPEDALAALRELQARGVKIVIVTLGEDGALYYTNDESYHVPPVPPVNVV 251 (301)
T ss_dssp HHHHHHHHHHTSSEEEEEHHHHHHHHTCSTSSHHHHHHHHHHHHHTTSSEEEEEEGGGEEEEEETTEEEEEEEESSSSSS
T ss_pred cchhhhhhccccchhccccccccccccccccchhhhhccccccchhhhhhhhccccccCccccccccccccccccccccc
Confidence 6788889999999999999999999999865555544 44458999999999999999999999999988 567999
Q ss_pred cCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCC
Q 029908 103 DTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPT 158 (185)
Q Consensus 103 d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~ 158 (185)
|++||||+|+|||+++++++.+ +++|+++|+++|+.++++.|+...+|+
T Consensus 252 dttGAGD~f~A~~i~~l~~~~~-------~~~a~~~a~~~aa~~v~~~g~~~~~p~ 300 (301)
T PF00294_consen 252 DTTGAGDAFAAGFIYGLLSGMS-------LEEALKFANAAAALKVQQPGPRSPLPT 300 (301)
T ss_dssp SCTTHHHHHHHHHHHHHHTTHH-------HHHHHHHHHHHHHHHHTSSSSSGGTT-
T ss_pred ceeccchhhhHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhCCCCCcCCCCC
Confidence 9999999999999999999999 999999999999999999999988876
No 35
>cd01164 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis.
Probab=99.90 E-value=5.5e-23 Score=165.86 Aligned_cols=132 Identities=30% Similarity=0.359 Sum_probs=112.7
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhh-ccccEEEcCHHHHhHhhCCCCCCHHHH----HHhcCCCCcEEEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIW-DKAEVIKVSDVELEFLTGSDKIDDESA----LSLWHPNLKLLLV 76 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l-~~~dii~~n~~E~~~l~~~~~~~~~~~----~~l~~~g~~~vvi 76 (185)
+.+++.++++++||+.+ .. .+.+ +++|++++|+.|++.+++....+.++. ..+.+.+++.|++
T Consensus 152 ~~~~~~~~~i~~D~~~~--------~~----~~~~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~viv 219 (289)
T cd01164 152 RLAREKGARVILDTSGE--------AL----LAALAAKPFLIKPNREELEELFGRPLGDEEDVIAAARKLIERGAENVLV 219 (289)
T ss_pred HHHHHcCCeEEEECChH--------HH----HHHHhcCCcEECCCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 46778899999999741 12 2333 799999999999999998754433322 2566789999999
Q ss_pred EcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCC
Q 029908 77 TLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGA 152 (185)
Q Consensus 77 t~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~ 152 (185)
|.|.+|++++.+++.+++++++++++|++||||+|+|+|++++++|++ +++|+++|+++|+.++++.|+
T Consensus 220 t~G~~G~~~~~~~~~~~~~~~~~~vvDttGAGDaf~a~~i~~l~~g~~-------~~~a~~~A~~~Aa~~~~~~G~ 288 (289)
T cd01164 220 SLGADGALLVTKDGVYRASPPKVKVVSTVGAGDSMVAGFVAGLAQGLS-------LEEALRLAVAAGSATAFSPGT 288 (289)
T ss_pred ecCCCCCEEEcCCcEEEecCCCccccCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCccC
Confidence 999999999988888899999999999999999999999999999999 999999999999999999885
No 36
>cd01940 Fructoselysine_kinase_like Fructoselysine kinase-like. Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown.
Probab=99.90 E-value=5.3e-23 Score=163.78 Aligned_cols=131 Identities=26% Similarity=0.346 Sum_probs=110.4
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCH-HHHHHhcCCCCcEEEEEcCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDD-ESALSLWHPNLKLLLVTLGE 80 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~-~~~~~l~~~g~~~vvit~G~ 80 (185)
+.++++|++|++||+.+ |. .+.+.++++++|++++|++|... .+. +.++++++.+++.||+|+|+
T Consensus 132 ~~a~~~g~~v~~D~~~~---~~-----~~~~~~~~~~~d~~~~~~~~~~~------~~~~~~~~~l~~~~~~~vvvT~G~ 197 (264)
T cd01940 132 QALVGAGALISFDFSDR---WD-----DDYLQLVCPYVDFAFFSASDLSD------EEVKAKLKEAVSRGAKLVIVTRGE 197 (264)
T ss_pred HHHHHcCCEEEEcCccc---CC-----HHHHHhhcccCCEEEechhhcCc------chHHHHHHHHHHcCCCEEEEEECC
Confidence 56888999999999865 22 23466788999999999876521 122 23346667899999999999
Q ss_pred CceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCC
Q 029908 81 HGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGA 152 (185)
Q Consensus 81 ~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~ 152 (185)
+|++++++++.+++|+++++++|++||||+|+|||++++++|++ ++++|+++|+++|+.++++.|+
T Consensus 198 ~G~~~~~~~~~~~~~~~~~~~vDttGAGDaf~ag~i~~l~~g~~------~~~~al~~a~~~aa~~~~~~G~ 263 (264)
T cd01940 198 DGAIAYDGAVFYSVAPRPVEVVDTLGAGDSFIAGFLLSLLAGGT------AIAEAMRQGAQFAAKTCGHEGA 263 (264)
T ss_pred CCeEEEeCCeEEecCCcCCCCCCCCCchHHHHHHHHHHHHhCCc------hHHHHHHHHHHHHHHHhcccCC
Confidence 99999998888899999999999999999999999999999974 2899999999999999999986
No 37
>PLN02548 adenosine kinase
Probab=99.90 E-value=7.7e-23 Score=168.22 Aligned_cols=142 Identities=20% Similarity=0.266 Sum_probs=114.0
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCC---CCHHHH-HHhcC------CCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDK---IDDESA-LSLWH------PNL 71 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~---~~~~~~-~~l~~------~g~ 71 (185)
+.++++|.++.+|+.. ++|. +...+.+.++++++|++++|++|+..+++... .+.+.+ .++.. .++
T Consensus 171 ~~a~~~g~~~~~~~~~--~~~~--~~~~~~l~~~l~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~l~~~~~~~g~~~ 246 (332)
T PLN02548 171 EHAAANNKTFMMNLSA--PFIC--EFFKDQLMEALPYVDFLFGNETEARTFAKVQGWETEDVEEIALKISALPKASGTHK 246 (332)
T ss_pred HHHHHcCCEEEEECCC--hhHH--HHhHHHHHHHHhhCCEEEecHHHHHHHhCccCCCcccHHHHHHHHHHhhhhccccC
Confidence 4678889888887752 3332 23456688999999999999999999987533 222222 22221 268
Q ss_pred cEEEEEcCCCceEEEEcCceeEecCc---ccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhh
Q 029908 72 KLLLVTLGEHGCRYYTKSFKGAVDAF---RVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTT 148 (185)
Q Consensus 72 ~~vvit~G~~G~~~~~~~~~~~~~~~---~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~ 148 (185)
+.||+|+|++|++++++++.+++|++ +++++|++||||+|+|||+++|++|++ +++|+++|+++|+++|+
T Consensus 247 ~~vvvT~G~~G~~~~~~~~~~~~pa~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~-------l~eal~~a~aaAa~~v~ 319 (332)
T PLN02548 247 RTVVITQGADPTVVAEDGKVKEFPVIPLPKEKLVDTNGAGDAFVGGFLSQLVQGKD-------IEECVRAGNYAANVIIQ 319 (332)
T ss_pred CEEEEEeCCCcEEEEECCeEEEeccccCCcCccccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHh
Confidence 89999999999999998888888763 347899999999999999999999999 99999999999999999
Q ss_pred ccCCCC
Q 029908 149 KKGAIP 154 (185)
Q Consensus 149 ~~g~~~ 154 (185)
+.|+..
T Consensus 320 ~~G~~~ 325 (332)
T PLN02548 320 RSGCTY 325 (332)
T ss_pred ccCCCC
Confidence 999874
No 38
>cd01947 Guanosine_kinase_like Guanosine kinase-like sugar kinases. Found in bacteria and archaea, the guanosine kinase-like group is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.
Probab=99.90 E-value=5.5e-23 Score=163.89 Aligned_cols=127 Identities=24% Similarity=0.368 Sum_probs=110.1
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEH 81 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~~ 81 (185)
+++++++ .+++|++.+... +.+.++++++|++++|++|+..+.+ .+.+.+.+++.|++|+|++
T Consensus 138 ~~a~~~~-~~~~d~~~~~~~--------~~~~~~~~~~d~~~~n~~e~~~l~~--------~~~~~~~~~~~viit~G~~ 200 (265)
T cd01947 138 RKCRETK-LVILQVTPRVRV--------DELNQALIPLDILIGSRLDPGELVV--------AEKIAGPFPRYLIVTEGEL 200 (265)
T ss_pred HHHHHhC-CeEeccCccccc--------hhHHHHhhhCCEEEeCHHHHHHhhh--------HHHHHhccCCEEEEEeCCC
Confidence 4566665 578898765321 3457788999999999999998864 2345567999999999999
Q ss_pred ceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCC
Q 029908 82 GCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGA 152 (185)
Q Consensus 82 G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~ 152 (185)
|+.++++++.+++|+++++++|++||||+|+|||++++++|++ +++|+++|+++|+.++++.|+
T Consensus 201 Ga~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~-------~~~al~~a~~~Aa~~v~~~G~ 264 (265)
T cd01947 201 GAILYPGGRYNHVPAKKAKVPDSTGAGDSFAAGFIYGLLKGWS-------IEEALELGAQCGAICVSHFGP 264 (265)
T ss_pred CeEEEECCeeEECCCCCCCCCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhccCC
Confidence 9999998888899999999999999999999999999999999 999999999999999999985
No 39
>PLN02630 pfkB-type carbohydrate kinase family protein
Probab=99.90 E-value=1e-22 Score=167.77 Aligned_cols=143 Identities=23% Similarity=0.308 Sum_probs=119.8
Q ss_pred cCCeEEEcCCCC-CCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCCCceEE
Q 029908 7 AGALLSYDPNLR-LPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGCRY 85 (185)
Q Consensus 7 ~g~~v~~D~~~~-~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~~G~~~ 85 (185)
+|+.+++||++. ..+|... ...+.++++++|++++|++|+..+ +.+.+. + ...|++|+|++|+++
T Consensus 152 ~g~~~~~Dp~~~~~~~~~~~---~~~~~~~L~~iDil~~ne~Ea~~l------~~~~~~---~--~~~vvvt~G~~G~~~ 217 (335)
T PLN02630 152 QALIRVFDPVDGTVKLVKLE---ETGFYDMLPRIGFLKASSEEALFI------DVEEVR---Q--KCCVIVTNGKKGCRI 217 (335)
T ss_pred CceEEecCCcccccccchhh---HHHHHHHHHhCCEEEecHHHHhhc------CHHHHc---c--CCEEEEEECCCceEE
Confidence 688999999863 4555311 123678899999999999999987 122221 1 238999999999999
Q ss_pred EEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCCHHHHHHH
Q 029908 86 YTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPTESEALAL 165 (185)
Q Consensus 86 ~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~~~~i~~~ 165 (185)
+++++.+++|+++++++|+|||||+|+|||++++++|.+ +.+|+++|+++|+.++++.|.. ..+++++++.
T Consensus 218 ~~~~~~~~~~~~~v~~vDttGAGDaF~agfi~~l~~g~~-------~~~a~~~A~a~aa~~v~~~G~~--~~~~~~l~~~ 288 (335)
T PLN02630 218 YWKDGEMRVPPFPAIQVDPTGAGDSFLGGFVAGLVQGLA-------VPDAALLGNYFGSLAVEQVGIP--KFDLRQLQRV 288 (335)
T ss_pred EECCeeEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhCcCCCC--CCCHHHHHHH
Confidence 998888899999999999999999999999999999999 9999999999999999999953 3599999999
Q ss_pred HhcCcch
Q 029908 166 LKRSTII 172 (185)
Q Consensus 166 ~~~~~~~ 172 (185)
++++.+.
T Consensus 289 ~~~i~i~ 295 (335)
T PLN02630 289 KDEVQRR 295 (335)
T ss_pred hhcEEEE
Confidence 9988764
No 40
>PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional
Probab=99.89 E-value=1.7e-22 Score=173.62 Aligned_cols=145 Identities=25% Similarity=0.279 Sum_probs=121.7
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHH---HHHHhc-CCCCcEEEEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDE---SALSLW-HPNLKLLLVT 77 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~---~~~~l~-~~g~~~vvit 77 (185)
+.++++|++|++||+... ...++++|++++|.+|++.+++......+ .+.+++ +.|++.|+||
T Consensus 165 ~~~k~~g~~vv~Dp~~~~-------------~~~~~~~dil~pN~~Ea~~l~g~~~~~~~~~~~~~~l~~~~g~~~vvVT 231 (473)
T PRK11316 165 QLARKAGVPVLIDPKGTD-------------FERYRGATLLTPNLSEFEAVVGKCKDEAELVEKGMKLIADYDLSALLVT 231 (473)
T ss_pred HHHHhcCCeEEEeCCCCC-------------ccccCCCeEECcCHHHHHHHhCCCCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 567889999999997431 13457899999999999999985332211 223443 5799999999
Q ss_pred cCCCceEEEEcCc-eeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCC
Q 029908 78 LGEHGCRYYTKSF-KGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPAL 156 (185)
Q Consensus 78 ~G~~G~~~~~~~~-~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~ 156 (185)
.|.+|+.++++++ .+++|+++++++|++||||+|.|||+++|++|.+ +++|+++|+++|+.++++.|+.+
T Consensus 232 ~G~~G~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~aa~~~~l~~g~~-------~~~al~~A~a~Aa~~v~~~G~~~-- 302 (473)
T PRK11316 232 RSEQGMTLLQPGKAPLHLPTQAREVYDVTGAGDTVISVLAAALAAGNS-------LEEACALANAAAGVVVGKLGTST-- 302 (473)
T ss_pred ecCCCcEEEecCCceEEecCcCCCCCCCCCCcHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHhhcccCCCcc--
Confidence 9999998888765 5889999999999999999999999999999999 99999999999999999999864
Q ss_pred CCHHHHHHHHhc
Q 029908 157 PTESEALALLKR 168 (185)
Q Consensus 157 ~~~~~i~~~~~~ 168 (185)
++.+++++++..
T Consensus 303 ~~~~~l~~~l~~ 314 (473)
T PRK11316 303 VSPIELENALRG 314 (473)
T ss_pred CCHHHHHHHHhc
Confidence 689999998884
No 41
>PRK09813 fructoselysine 6-kinase; Provisional
Probab=99.89 E-value=1e-22 Score=162.10 Aligned_cols=129 Identities=22% Similarity=0.256 Sum_probs=108.6
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCH-HHHHHhcCCCCcEEEEEcCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDD-ESALSLWHPNLKLLLVTLGE 80 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~-~~~~~l~~~g~~~vvit~G~ 80 (185)
+.++++|+++++||+.+. . .+.+.++++++|++++|..+.. .+. +.++++.+.|++.++||+|+
T Consensus 130 ~~~~~~~~~v~~D~~~~~---~-----~~~~~~~~~~~d~~~~~~~~~~-------~~~~~~~~~~~~~g~~~viit~G~ 194 (260)
T PRK09813 130 PQLHAAGKLTAFDFSDKW---D-----SPLWQTLVPHLDYAFASAPQED-------EFLRLKMKAIVARGAGVVIVTLGE 194 (260)
T ss_pred HHHHHcCCeEEEEcCCCc---c-----HHHHHHhCCceeEEEecCCcch-------HHHHHHHHHHHHcCCCEEEEEECC
Confidence 567889999999998642 1 2345678999999998865311 111 22335667899999999999
Q ss_pred CceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCC
Q 029908 81 HGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGA 152 (185)
Q Consensus 81 ~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~ 152 (185)
+|++++++++.+++|+++++++|++||||+|+|||++++++|++ +++|+++|+++|+.++++.|+
T Consensus 195 ~Ga~~~~~~~~~~~~~~~~~~vDttGAGDaF~ag~i~~~~~g~~-------~~~al~~a~~~aa~~~~~~G~ 259 (260)
T PRK09813 195 NGSIAWDGAQFWRQAPEPVTVVDTMGAGDSFIAGFLCGWLAGMT-------LPQAMAQGTACAAKTIQYHGA 259 (260)
T ss_pred CceEEEECCEEEecCCcccCCCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhccCC
Confidence 99999998888999999999999999999999999999999999 999999999999999999985
No 42
>cd01946 ribokinase_group_C Ribokinase-like subgroup C. Found only in bacteria, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.
Probab=99.89 E-value=1.7e-22 Score=162.13 Aligned_cols=143 Identities=23% Similarity=0.387 Sum_probs=115.8
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEH 81 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~~ 81 (185)
+.++++ .+|++||. ..|. ....+.+.++++++|++++|++|+..+++.... .+..+.+.+.|++.|++|+|.+
T Consensus 133 ~~~~~~-~~v~~D~~---~~~~--~~~~~~~~~~l~~~d~~~~n~~E~~~l~g~~~~-~~~~~~l~~~g~~~vvvt~G~~ 205 (277)
T cd01946 133 EQVKDP-KLVVMDTM---NFWI--SIKPEKLKKVLAKVDVVIINDGEARQLTGAANL-VKAARLILAMGPKALIIKRGEY 205 (277)
T ss_pred HHHHhC-CEEEEccH---HHhh--hhhHHHHHHHhccCCEEeCCHHHHHHHhCCchH-HHHHHHHHHcCCCEEEEecCCC
Confidence 345666 88999983 2353 233566788999999999999999999885422 1233466778999999999999
Q ss_pred ceEEEEcCceeEecCcccc-cccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCC
Q 029908 82 GCRYYTKSFKGAVDAFRVK-TVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAI 153 (185)
Q Consensus 82 G~~~~~~~~~~~~~~~~~~-~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~ 153 (185)
|++++++++.+++|+++++ ++|++||||+|+|||+++|+++++ ..++++++|+++|+++|+.+|++.|+.
T Consensus 206 G~~~~~~~~~~~~~~~~~~~~vDttGAGDaF~Agfl~~l~~~~~--~~~~~~~~a~~~a~~~aa~~~~~~G~~ 276 (277)
T cd01946 206 GALLFTDDGYFAAPAYPLESVFDPTGAGDTFAGGFIGYLASQKD--TSEANMRRAIIYGSAMASFCVEDFGTK 276 (277)
T ss_pred cEEEEECCceEEcCCcccCccCCCCCchHHHHHHHHHHHHhCCC--cchhhHHHHHHHhHHHHhhhhhhcCCC
Confidence 9999998888889998875 889999999999999999998753 123448999999999999999999964
No 43
>cd01941 YeiC_kinase_like YeiC-like sugar kinase. Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.
Probab=99.89 E-value=2.2e-22 Score=161.96 Aligned_cols=132 Identities=28% Similarity=0.425 Sum_probs=108.4
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHH----HHHHhcCCCCcEEEEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDE----SALSLWHPNLKLLLVT 77 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~----~~~~l~~~g~~~vvit 77 (185)
+.+++++.++++||+.. +...+. .++++++|++++|++|+..+++....+.. ..+.+...+++.|++|
T Consensus 148 ~~a~~~~~~v~~d~~~~-------~~~~~~-~~~~~~~dii~~n~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvit 219 (288)
T cd01941 148 ALAAKHGVPVAFEPTSA-------PKLKKL-FYLLHAIDLLTPNRAELEALAGALIENNEDENKAAKILLLPGIKNVIVT 219 (288)
T ss_pred HhhhhcCCcEEEEccch-------HHhccc-hhhcccceEEeCCHHHHHHHhCcccCCchhHHHHHHHHHHcCCcEEEEE
Confidence 45778899999999742 112221 26889999999999999999887543211 1235556899999999
Q ss_pred cCCCceEEEEc---CceeEecC-cccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhh
Q 029908 78 LGEHGCRYYTK---SFKGAVDA-FRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTT 148 (185)
Q Consensus 78 ~G~~G~~~~~~---~~~~~~~~-~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~ 148 (185)
+|++|++++++ +..+++|+ ++.+++|++||||+|+|+|+++|++|++ +++|+++|+++|+.+|+
T Consensus 220 ~G~~Ga~~~~~~~~~~~~~~~~~~~~~~vDttGAGDaf~a~~~~~l~~g~~-------~~~al~~a~~~Aa~~~~ 287 (288)
T cd01941 220 LGAKGVLLSSREGGVETKLFPAPQPETVVNVTGAGDAFVAGLVAGLLEGMS-------LDDSLRFAQAAAALTLE 287 (288)
T ss_pred eCCCcEEEEecCCCceeEEecCCCCccceeCCCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhc
Confidence 99999999987 56688888 5789999999999999999999999999 99999999999999986
No 44
>cd01173 pyridoxal_pyridoxamine_kinase Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP. Mammals are unable to synthesize PLP de novo and require its precursors in the form of vitamin B6 (pyridoxal, pyridoxine, and pyridoxamine) from their diet. Pyridoxal kinase encoding genes are also found in many other species including yeast and bacteria.
Probab=99.87 E-value=2.7e-21 Score=153.57 Aligned_cols=141 Identities=27% Similarity=0.223 Sum_probs=112.8
Q ss_pred hHHHHc--CCeEEEcCCCCC--CCCCChHHHHHHHHHhhc-cccEEEcCHHHHhHhhCCCCCCHHHH----HHhcCCCCc
Q 029908 2 KAAKEA--GALLSYDPNLRL--PLWPSPEEAREQIMSIWD-KAEVIKVSDVELEFLTGSDKIDDESA----LSLWHPNLK 72 (185)
Q Consensus 2 ~~a~~~--g~~v~~D~~~~~--~~~~~~~~~~~~~~~~l~-~~dii~~n~~E~~~l~~~~~~~~~~~----~~l~~~g~~ 72 (185)
+.++++ |++|++||+.+. .+|...+...+.+.++++ ++|+++||..|++.|++.+..+.+++ +++.+.|++
T Consensus 95 ~~~~~~~~~~~vv~Dpv~~~~~~~~~~~~~~~~~~~~~l~~~~dvi~pN~~Ea~~l~g~~~~~~~~~~~~~~~l~~~g~~ 174 (254)
T cd01173 95 KRLKEKNPNLLYVCDPVMGDNGKLYVVAEEIVPVYRDLLVPLADIITPNQFELELLTGKKINDLEDAKAAARALHAKGPK 174 (254)
T ss_pred HHHHHhCCCceEEECCCCCcCCcceecChhHHHHHHHHHHhcCCEECCcHHHHHHHcCCCcCCHHHHHHHHHHHHHhCCC
Confidence 455665 899999998643 455434566777777777 99999999999999999865443332 366678999
Q ss_pred EEEEEcCCC------ceEEEEcCceeEecCcccc-cccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHH
Q 029908 73 LLLVTLGEH------GCRYYTKSFKGAVDAFRVK-TVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGAL 145 (185)
Q Consensus 73 ~vvit~G~~------G~~~~~~~~~~~~~~~~~~-~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~ 145 (185)
.|++|.|.. |++++++++.++++.++.+ ++|++|+||+|+|+|+++|++|.+ +++++++|++....
T Consensus 175 ~Vvit~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~GaGD~f~a~~~~~l~~g~~-------~~~a~~~A~~~~~~ 247 (254)
T cd01173 175 TVVVTSVELADDDRIEMLGSTATEAWLVQRPKIPFPAYFNGTGDLFAALLLARLLKGKS-------LAEALEKALNFVHE 247 (254)
T ss_pred EEEEEeeccCCCCcEEEEEEecCccEEEEeeccCCCCCcCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHH
Confidence 999999974 7887777665666666566 699999999999999999999999 99999999999887
Q ss_pred Hhhc
Q 029908 146 STTK 149 (185)
Q Consensus 146 ~~~~ 149 (185)
.++.
T Consensus 248 ~i~~ 251 (254)
T cd01173 248 VLEA 251 (254)
T ss_pred HHHH
Confidence 7654
No 45
>cd01937 ribokinase_group_D Ribokinase-like subgroup D. Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.
Probab=99.87 E-value=1.9e-21 Score=154.08 Aligned_cols=129 Identities=28% Similarity=0.297 Sum_probs=105.9
Q ss_pred HcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCCCceEE
Q 029908 6 EAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGCRY 85 (185)
Q Consensus 6 ~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~~G~~~ 85 (185)
+..++|++||+.....|.. ....+.++++++|++++|++|+..+ . ...+..+++...|++.|++|.|.+|+.+
T Consensus 126 ~~~~~v~~D~~~~~~~~~~---~~~~~~~~l~~~di~~~n~~E~~~~---~-~~~~~~~~l~~~g~~~vvvt~g~~g~~~ 198 (254)
T cd01937 126 RKFAFISLDAQGFLRRANQ---EKLIKCVILKLHDVLKLSRVEAEVI---S-TPTELARLIKETGVKEIIVTDGEEGGYI 198 (254)
T ss_pred hhhhheeEccccceeeccc---cchHHHhhcccCcEEEEcHHHHhhc---C-CHHHHHHHHHHcCCCEEEEeeCCcceEE
Confidence 3447899999864323321 1223678999999999999999983 1 1122334566789999999999999999
Q ss_pred EEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhh
Q 029908 86 YTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTT 148 (185)
Q Consensus 86 ~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~ 148 (185)
+++++.+++|+++++++|++||||+|+|+|++++++|.+ +++|+++|+++|+.+++
T Consensus 199 ~~~~~~~~~~~~~~~~vdt~GAGD~f~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~i~ 254 (254)
T cd01937 199 FDGNGKYTIPASKKDVVDPTGAGDVFLAAFLYSRLSGKD-------IKEAAEFAAAAAAKFIE 254 (254)
T ss_pred EECCccEEccccCceeccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhC
Confidence 998888899999999999999999999999999999999 99999999999999875
No 46
>PRK12413 phosphomethylpyrimidine kinase; Provisional
Probab=99.87 E-value=3.6e-21 Score=152.83 Aligned_cols=138 Identities=19% Similarity=0.206 Sum_probs=111.4
Q ss_pred HcCCeEEEcCCCCCCCCC--ChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHH----HHhcCCCCcEEEEEcC
Q 029908 6 EAGALLSYDPNLRLPLWP--SPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESA----LSLWHPNLKLLLVTLG 79 (185)
Q Consensus 6 ~~g~~v~~D~~~~~~~~~--~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~----~~l~~~g~~~vvit~G 79 (185)
+++++|++||++++..|. +.+...+.+.++++++|+++||+.|++.|+|.+..+.+++ +++.+.|++.|++|.|
T Consensus 95 ~~~~~vv~DPv~~~~~~~~~~~~~~~~~l~~ll~~~dli~pN~~E~~~L~g~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g 174 (253)
T PRK12413 95 HPGIPVVLDPVLVCKETHDVEVSELRQELIQFFPYVTVITPNLVEAELLSGKEIKTLEDMKEAAKKLYDLGAKAVVIKGG 174 (253)
T ss_pred CCCCCEEEcCceecCCCCccccHHHHHHHHHHhccCcEECCCHHHHHHHhCcCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 468999999999998884 3556677777889999999999999999999765544332 3566789999999999
Q ss_pred CCce-----EEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhcc
Q 029908 80 EHGC-----RYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKK 150 (185)
Q Consensus 80 ~~G~-----~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~ 150 (185)
..|. .++..++..+.+.++...+|++||||+|+|+|+++|++|.+ +++|+++|.++....+++.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaGDaf~a~~~~~l~~g~~-------l~ea~~~A~~~~~~~l~~~ 243 (253)
T PRK12413 175 NRLSQKKAIDLFYDGKEFVILESPVLEKNNIGAGCTFASSIASQLVKGKS-------PLEAVKNSKDFVYQAIQQS 243 (253)
T ss_pred CCCCCCcceEEEEcCCEEEEEeecccCCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHHHH
Confidence 8642 23333344455566677789999999999999999999999 9999999999988888764
No 47
>cd01939 Ketohexokinase Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose. KHK can also phosphorylate several other furanose sugars. It is found in higher eukaryotes where it is believed to function as a dimer and requires K(+) and ATP to be active. In humans, hepatic KHK deficiency causes fructosuria, a benign inborn error of metabolism.
Probab=99.87 E-value=1.3e-21 Score=157.96 Aligned_cols=124 Identities=25% Similarity=0.293 Sum_probs=100.5
Q ss_pred CeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHH---HhcCCCCcEEEEEcCCCceEE
Q 029908 9 ALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESAL---SLWHPNLKLLLVTLGEHGCRY 85 (185)
Q Consensus 9 ~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~---~l~~~g~~~vvit~G~~G~~~ 85 (185)
+++++|++.. .+.+.++++++|++++|++|+..+ +... .++.. .+...+++.||+|+|++|+.+
T Consensus 160 ~~v~~d~~~~----------~~~~~~~l~~~di~~~n~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~vvvt~G~~G~~~ 226 (290)
T cd01939 160 ITISVEVEKP----------REELLELAAYCDVVFVSKDWAQSR-GYKS--PEECLRGEGPRAKKAALLVCTWGDQGAGA 226 (290)
T ss_pred eEEEEEeccC----------chhhhhHHhhCCEEEEEhHHHHhc-CcCC--HHHHHHhhhhhccCCcEEEEEcccCCeEE
Confidence 6899998742 123458899999999999988765 4332 22222 222468899999999999999
Q ss_pred EEc-CceeEecCccc-ccccCCCcchHHHHHHHHHHHccC-CCCCChHHHHHHHHHHHHHhHHHhhccCC
Q 029908 86 YTK-SFKGAVDAFRV-KTVDTTGAGDAFVGALLCKIVDDQ-SAIEDEPRLREILKFANACGALSTTKKGA 152 (185)
Q Consensus 86 ~~~-~~~~~~~~~~~-~~~d~~GaGDaf~A~~~~~l~~g~-~~~~~~~~~~~a~~~a~~~aa~~~~~~g~ 152 (185)
+++ +..+++|+++. +++||+||||+|+|||++++++|+ + +++|+++|+++|++++++.|.
T Consensus 227 ~~~~~~~~~~~~~~~~~vvDt~GAGDsf~agfl~~l~~g~~~-------~~~a~~~a~a~aa~~i~~~G~ 289 (290)
T cd01939 227 LGPDGEYVHSPAHKPIRVVDTLGAGDTFNAAVIYALNKGPDD-------LSEALDFGNRVASQKCTGVGF 289 (290)
T ss_pred EcCCCCEEEecCCCCCCcccCCCchHHHHHHHHHHHHcCCcc-------HHHHHHHHHHHHHHHHhhhcC
Confidence 886 45778898765 699999999999999999999999 7 999999999999999999874
No 48
>TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase. This model represents phosphomethylpyrimidine kinase, the ThiD protein of thiamine biosynthesis. The protein is commonly observed within operons containing other thiamine biosynthesis genes. Numerous examples are fusion proteins with other thiamine-biosynthetic domains. Saccaromyces has three recent paralogs, two of which are isofunctional and score above the trusted cutoff. The third shows a longer branch length in a phylogenetic tree and scores below the trusted cutoff, as do putative second copies in a number of species.
Probab=99.86 E-value=2.2e-20 Score=148.59 Aligned_cols=141 Identities=21% Similarity=0.177 Sum_probs=112.2
Q ss_pred hHHHHcCC-eEEEcCCCCCC----CCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHH----HHHhcCCCCc
Q 029908 2 KAAKEAGA-LLSYDPNLRLP----LWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDES----ALSLWHPNLK 72 (185)
Q Consensus 2 ~~a~~~g~-~v~~D~~~~~~----~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~----~~~l~~~g~~ 72 (185)
+.+++++. +|++||..+.. ++. .+.......++++++|+++||..|++.|++....+.++ ++++.+.|++
T Consensus 87 ~~~~~~~~~~vVlDPv~~~~~g~~l~~-~~~~~~~~~~ll~~~dvitpN~~Ea~~L~g~~~~~~~~~~~~a~~l~~~g~~ 165 (254)
T TIGR00097 87 RKLREYPVRPLVVDPVMVAKSGAPLLE-EEAIEALRKRLLPLATLITPNLPEAEALLGTKIRTEQDMIKAAKKLRELGPK 165 (254)
T ss_pred HHHHhcCCCcEEECCccccCCCCcCCC-HHHHHHHHHhccccccEecCCHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCC
Confidence 45677788 79999987542 332 23333344568899999999999999999876443322 2366678999
Q ss_pred EEEEEcCCC----ce-EEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHh
Q 029908 73 LLLVTLGEH----GC-RYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALST 147 (185)
Q Consensus 73 ~vvit~G~~----G~-~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~ 147 (185)
.|++|.|+. |. +++++++.++++.++++.+|++|+||+|.|+|+++|++|++ +++|+++|++++...+
T Consensus 166 ~Vvvt~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~aalaa~la~g~~-------l~eA~~~A~~~~~~~i 238 (254)
T TIGR00097 166 AVLIKGGHLEGDQAVDVLFDGGEIHILKAPRIETKNTHGTGCTLSAAIAANLAKGLS-------LKEAVKEAKEFVTGAI 238 (254)
T ss_pred EEEEeCCCCCCCceeEEEEECCeEEEEEecccCCCCCCChHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHH
Confidence 999999973 43 56777777788888889999999999999999999999999 9999999999999998
Q ss_pred hcc
Q 029908 148 TKK 150 (185)
Q Consensus 148 ~~~ 150 (185)
++.
T Consensus 239 ~~~ 241 (254)
T TIGR00097 239 RYG 241 (254)
T ss_pred HHh
Confidence 763
No 49
>PRK05756 pyridoxamine kinase; Validated
Probab=99.85 E-value=1.8e-20 Score=151.45 Aligned_cols=140 Identities=24% Similarity=0.189 Sum_probs=111.3
Q ss_pred HHHHcC--CeEEEcCCCCCC---CCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHH----HHhcCCCCcE
Q 029908 3 AAKEAG--ALLSYDPNLRLP---LWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESA----LSLWHPNLKL 73 (185)
Q Consensus 3 ~a~~~g--~~v~~D~~~~~~---~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~----~~l~~~g~~~ 73 (185)
.+++.+ +.+++||+.+.. .|...+.......++++++|+++||..|++.|++.+..+.+++ +++.+.|++.
T Consensus 98 ~~k~~~~~~~~v~DPv~~d~~~~~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~L~g~~~~~~~~~~~~~~~l~~~g~~~ 177 (286)
T PRK05756 98 RVKAANPQALYFCDPVMGDPEKGCIVAPGVAEFLRDRALPAADIITPNLFELEWLSGRPVETLEDAVAAARALIARGPKI 177 (286)
T ss_pred HHHHhCCCceEEECCccccCCCCEEECccHhHHHHHhhcccccEecCCHHHHHHHhCCCcCCHHHHHHHHHHHHHhCCCE
Confidence 445454 568999998773 4543333344445699999999999999999998765443333 2566789999
Q ss_pred EEEEcCCC--------ceEEEEcCceeEecCccccc-ccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhH
Q 029908 74 LLVTLGEH--------GCRYYTKSFKGAVDAFRVKT-VDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGA 144 (185)
Q Consensus 74 vvit~G~~--------G~~~~~~~~~~~~~~~~~~~-~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa 144 (185)
|+||.|.. |++++++++.++++.++++. +|++||||+|+|+|++++++|.+ +++|+++|++...
T Consensus 178 Vvvt~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~GaGD~f~a~~~a~l~~g~~-------~~~al~~A~~~~~ 250 (286)
T PRK05756 178 VLVTSLARAGYPADRFEMLLVTADGAWHISRPLVDFMRQPVGVGDLTSALFLARLLQGGS-------LEEALEHTTAAVY 250 (286)
T ss_pred EEEeccccCCCCCCcEEEEEEECCceEEEecCccCCCCCCCChHHHHHHHHHHHHhcCCC-------HHHHHHHHHHHHH
Confidence 99999876 47777777777788777777 79999999999999999999999 9999999999998
Q ss_pred HHhhc
Q 029908 145 LSTTK 149 (185)
Q Consensus 145 ~~~~~ 149 (185)
..++.
T Consensus 251 ~~i~~ 255 (286)
T PRK05756 251 EVMAR 255 (286)
T ss_pred HHHHH
Confidence 88865
No 50
>cd01169 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1. The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction.
Probab=99.85 E-value=5.8e-20 Score=144.78 Aligned_cols=140 Identities=20% Similarity=0.162 Sum_probs=110.8
Q ss_pred HHHHc-CCeEEEcCCCCCCCCC---ChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHH----HHHhcCCCCcEE
Q 029908 3 AAKEA-GALLSYDPNLRLPLWP---SPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDES----ALSLWHPNLKLL 74 (185)
Q Consensus 3 ~a~~~-g~~v~~D~~~~~~~~~---~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~----~~~l~~~g~~~v 74 (185)
.+++. ++++++||+.+...+. ..+........+++++|+++||..|++.|++....+.++ ++++.+.|++.|
T Consensus 89 ~~~~~~~~~vv~Dpv~~~~~~~~~~~~~~~~~~~~~ll~~~dvitpN~~Ea~~L~g~~~~~~~~~~~~~~~l~~~g~~~V 168 (242)
T cd01169 89 ALKDYPDIPVVLDPVMVAKSGDSLLDDDAIEALRELLLPLATLITPNLPEAELLTGLEIATEEDMMKAAKALLALGAKAV 168 (242)
T ss_pred HHHhCCCCcEEECCceeCCCCCcccCHHHHHHHHHHhhccCeEEeCCHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 44554 8999999988754332 123334445567899999999999999999976544322 235667899999
Q ss_pred EEEcCCCc-----eEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhc
Q 029908 75 LVTLGEHG-----CRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTK 149 (185)
Q Consensus 75 vit~G~~G-----~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~ 149 (185)
+||.|..| .+++++++.++++.++.++++++|+||+|+|+|+++|++|.+ +.+|+++|+......+++
T Consensus 169 vit~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaGD~f~a~l~a~l~~g~~-------~~~A~~~A~~~~~~~i~~ 241 (242)
T cd01169 169 LIKGGHLPGDEAVDVLYDGGGFFEFESPRIDTKNTHGTGCTLSSAIAANLAKGLS-------LEEAVREAKEYVTQAIRN 241 (242)
T ss_pred EEecCCCCCCceeEEEEECCcEEEEecceeCCCCCCChHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHHHc
Confidence 99999875 466777777888888888899999999999999999999999 999999999988776653
No 51
>PRK12412 pyridoxal kinase; Reviewed
Probab=99.85 E-value=4.5e-20 Score=147.93 Aligned_cols=141 Identities=17% Similarity=0.139 Sum_probs=110.4
Q ss_pred hHHHHcCCe-EEEcCCCCCCCCC---ChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHH----HHhcCCCCcE
Q 029908 2 KAAKEAGAL-LSYDPNLRLPLWP---SPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESA----LSLWHPNLKL 73 (185)
Q Consensus 2 ~~a~~~g~~-v~~D~~~~~~~~~---~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~----~~l~~~g~~~ 73 (185)
+.+++.+.+ |++||........ .++.......++++++|+++||..|++.|++.+..+.+++ +++.+.|++.
T Consensus 92 ~~~~~~~~~~vv~DPv~~~~~g~~~~~~~~~~~~~~~ll~~advitpN~~Ea~~L~g~~~~~~~~~~~aa~~l~~~g~~~ 171 (268)
T PRK12412 92 ETIEKHNFKNVVVDPVMVCKGADEALHPETNDCLRDVLVPKALVVTPNLFEAYQLSGVKINSLEDMKEAAKKIHALGAKY 171 (268)
T ss_pred HHHHhcCCCCEEECcCeeeCCCCcCCChHHHHHHHHhhhccceEEcCCHHHHHHHhCcCCCCHHHHHHHHHHHHhcCCCE
Confidence 356667776 9999987543221 1222334455689999999999999999998765443332 3666789999
Q ss_pred EEEEcCCCce------EEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHh
Q 029908 74 LLVTLGEHGC------RYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALST 147 (185)
Q Consensus 74 vvit~G~~G~------~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~ 147 (185)
|+||.|..|+ +++.++..++++.++++.+|++|+||+|+|+|+++|++|.+ +++|+++|.++....+
T Consensus 172 ViIt~G~~g~~~~~~~~~~~~~~~~~~~~~~v~~~~t~GaGD~f~aa~aa~l~~g~~-------l~eA~~~A~~~~~~~i 244 (268)
T PRK12412 172 VLIKGGSKLGTETAIDVLYDGETFDLLESEKIDTTNTHGAGCTYSAAITAELAKGKP-------VKEAVKTAKEFITAAI 244 (268)
T ss_pred EEEeccCCCCCCceEEEEEeCCEEEEEEeCccCCCCCCchHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHH
Confidence 9999998753 44555555678888889999999999999999999999999 9999999999999888
Q ss_pred hc
Q 029908 148 TK 149 (185)
Q Consensus 148 ~~ 149 (185)
.+
T Consensus 245 ~~ 246 (268)
T PRK12412 245 RY 246 (268)
T ss_pred HH
Confidence 76
No 52
>PRK06427 bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed
Probab=99.84 E-value=8.9e-20 Score=145.86 Aligned_cols=141 Identities=21% Similarity=0.196 Sum_probs=110.6
Q ss_pred hHHHHcCC-eEEEcCCCCCC----CCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHH-----HHHHhcCCCC
Q 029908 2 KAAKEAGA-LLSYDPNLRLP----LWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDE-----SALSLWHPNL 71 (185)
Q Consensus 2 ~~a~~~g~-~v~~D~~~~~~----~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~-----~~~~l~~~g~ 71 (185)
+.+++.+. ++++||+.+.. .|. .+.......++++++|+++||..|++.|++.+..+.+ .++++.+.|+
T Consensus 93 ~~~~~~~~~~vv~DPv~~~~~~~~~~~-~~~~~~~~~~ll~~~dvitpN~~Ea~~L~g~~~~~~~~~~~~~a~~l~~~g~ 171 (266)
T PRK06427 93 EALKRYPIPPVVLDPVMIAKSGDPLLA-DDAVAALRERLLPLATLITPNLPEAEALTGLPIADTEDEMKAAARALHALGC 171 (266)
T ss_pred HHHHhCCCCCEEEcCccccCCCCcCCC-HHHHHHHHHhhhCcCeEEcCCHHHHHHHhCCCCCCcHHHHHHHHHHHHhcCC
Confidence 34566665 89999987642 332 2333334446899999999999999999987543322 2236667899
Q ss_pred cEEEEEcCC--Cce----EEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHH
Q 029908 72 KLLLVTLGE--HGC----RYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGAL 145 (185)
Q Consensus 72 ~~vvit~G~--~G~----~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~ 145 (185)
+.|+||.|. .|. +++++++.++++.++.+.++++|+||+|+|+|++++++|.+ +.+|+++|+.++..
T Consensus 172 ~~Vvit~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~GaGD~f~a~l~~~l~~g~~-------l~~A~~~A~~~~~~ 244 (266)
T PRK06427 172 KAVLIKGGHLLDGEESVDWLFDGEGEERFSAPRIPTKNTHGTGCTLSAAIAAELAKGAS-------LLDAVQTAKDYVTR 244 (266)
T ss_pred CEEEEcCCCCCCCCceeEEEEeCCcEEEEEeeeECCCCCCChHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHH
Confidence 999999998 553 66677767788888888889999999999999999999999 99999999999998
Q ss_pred Hhhcc
Q 029908 146 STTKK 150 (185)
Q Consensus 146 ~~~~~ 150 (185)
.+++.
T Consensus 245 ~i~~~ 249 (266)
T PRK06427 245 AIRHA 249 (266)
T ss_pred HHHHH
Confidence 88763
No 53
>PRK08573 phosphomethylpyrimidine kinase; Provisional
Probab=99.84 E-value=1.7e-19 Score=154.08 Aligned_cols=140 Identities=22% Similarity=0.207 Sum_probs=112.4
Q ss_pred hHHHHcCCeEEEcCCCCC----CCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHH----HHhc-CCCCc
Q 029908 2 KAAKEAGALLSYDPNLRL----PLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESA----LSLW-HPNLK 72 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~----~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~----~~l~-~~g~~ 72 (185)
+.++++|++|++||++++ .+|. .+.......++++++|+++||..|++.|+|....+.+++ +++. ..|++
T Consensus 91 ~~~k~~g~~vv~DPv~~~~sG~~l~~-~~~~~~l~~~llp~adli~pN~~Ea~~L~g~~i~~~~d~~~aa~~L~~~~G~~ 169 (448)
T PRK08573 91 KTVSKYGFPLVVDPVMIAKSGAPLLR-EDAVDALIKRLLPLATVVTPNRPEAEKLTGMKIRSVEDARKAAKYIVEELGAE 169 (448)
T ss_pred HHHHHcCCCEEEcCccccCCCCcCCC-HHHHHHHHHhhhccCEEEcCCHHHHHHHhCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 567888999999998774 3453 333344456789999999999999999999765443333 2454 37999
Q ss_pred EEEEEcCC----Cce-EEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHh
Q 029908 73 LLLVTLGE----HGC-RYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALST 147 (185)
Q Consensus 73 ~vvit~G~----~G~-~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~ 147 (185)
.|++|.|. .|+ +++.++..++++.++++++|++||||+|+|+|++++++|.+ +.+|+++|+.+....+
T Consensus 170 ~VvVt~G~~~g~~~~~~~~~~~~~~~~~~~~v~~~dt~GAGDaFsAa~aa~l~~G~~-------l~eAl~~A~~~~~~al 242 (448)
T PRK08573 170 AVVVKGGHLEGEEAVDVLYHNGTFREFRAPRVESGCTHGTGCSFSAAIAAGLAKGLD-------PEEAIKTAKKFITMAI 242 (448)
T ss_pred EEEEecccCCCCceeEEEEECCeEEEEEecCcCCCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHH
Confidence 99999985 343 45566666788888889999999999999999999999999 9999999999998888
Q ss_pred hc
Q 029908 148 TK 149 (185)
Q Consensus 148 ~~ 149 (185)
++
T Consensus 243 ~~ 244 (448)
T PRK08573 243 KY 244 (448)
T ss_pred HH
Confidence 83
No 54
>PRK07105 pyridoxamine kinase; Validated
Probab=99.84 E-value=7.4e-20 Score=147.75 Aligned_cols=141 Identities=21% Similarity=0.233 Sum_probs=109.9
Q ss_pred HHHcCCeEEEcCCCCC--CCCCC-hHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCC----CHHHH----HHhcCCCCc
Q 029908 4 AKEAGALLSYDPNLRL--PLWPS-PEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKI----DDESA----LSLWHPNLK 72 (185)
Q Consensus 4 a~~~g~~v~~D~~~~~--~~~~~-~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~----~~~~~----~~l~~~g~~ 72 (185)
+++.++++++||+.+. .+|.. .+...+.+.++++++|+++||..|++.|++.+.. +.+++ +++.+.|++
T Consensus 100 ~~~~~~~vv~DPv~~~~~~l~~~~~~~~~~~~~~ll~~advitpN~~Ea~~L~g~~~~~~~~~~~~~~~~a~~l~~~g~~ 179 (284)
T PRK07105 100 FKKKDLLVVVDPVMGDNGKLYQGFDQEMVEEMRKLIQKADVITPNLTEACLLLDKPYLEKSYSEEEIKQLLRKLADLGPK 179 (284)
T ss_pred hccCCCeEEECCccccCCcCCCCCCHHHHHHHHHHHhhCCEecCCHHHHHHHcCCCcCcCCCCHHHHHHHHHHHHhcCCC
Confidence 3556899999998754 35642 3456667778999999999999999999987532 22222 356678999
Q ss_pred EEEEEc-----CCCceEEEEcC--ceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHH
Q 029908 73 LLLVTL-----GEHGCRYYTKS--FKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGAL 145 (185)
Q Consensus 73 ~vvit~-----G~~G~~~~~~~--~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~ 145 (185)
.|+||. |..|+++++++ ..++.+.+..+ ++++|+||+|+|+|++++++|++ +++++++|++++..
T Consensus 180 ~Vvvt~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~-~~~~GaGD~f~aa~~~~l~~g~~-------l~~av~~A~~~~~~ 251 (284)
T PRK07105 180 IVIITSVPFEDGKIGVAYYDRATDRFWKVFCKYIP-AHYPGTGDIFTSVITGSLLQGDS-------LPIALDRAVQFIEK 251 (284)
T ss_pred EEEEcCeeeCCCeEEEEEEeCCCCeEEEEeecccC-CCcCChhHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHH
Confidence 999999 66788887643 34455554444 79999999999999999999999 99999999999998
Q ss_pred HhhccCC
Q 029908 146 STTKKGA 152 (185)
Q Consensus 146 ~~~~~g~ 152 (185)
.+.+...
T Consensus 252 ~i~~~~~ 258 (284)
T PRK07105 252 GIRATLG 258 (284)
T ss_pred HHHHHHh
Confidence 8876543
No 55
>cd00287 ribokinase_pfkB_like ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group. The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-dehydro-3-deoxygluconokinase, 1-phosphofructokinase, the minor 6-phosphofructokinase (PfkB), inosine-guanosine kinase, and adenosine kinase. Even though there is a high degree of structural conservation within this superfamily, their multimerization level varies widely, monomeric (e.g. adenosine kinase), dimeric (e.g. ribokinase), and trimeric (e.g THZ kinase).
Probab=99.83 E-value=4.9e-20 Score=140.07 Aligned_cols=114 Identities=33% Similarity=0.456 Sum_probs=95.4
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHH----HHHHhcCCCCcEEEEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDE----SALSLWHPNLKLLLVT 77 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~----~~~~l~~~g~~~vvit 77 (185)
+.+++.|+++++||+.+...|.. +.+.++++++|++++|++|++.+++....+.+ ...++.+.+++.|++|
T Consensus 78 ~~~~~~~~~v~~D~~~~~~~~~~-----~~~~~~~~~~dvl~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt 152 (196)
T cd00287 78 EEARRRGVPVVLDPGPRAVRLDG-----EELEKLLPGVDILTPNEEEAEALTGRRDLEVKEAAEAAALLLSKGPKVVIVT 152 (196)
T ss_pred HHHHHcCCeEEEeCCcccccccc-----chHHHHHhhCCEECCCHHHHHHHhCCCCCChHHHHHHHHHHHhcCCCEEEEE
Confidence 56788899999999987655542 12677889999999999999999987665432 2336667899999999
Q ss_pred cCCCceEEEE-cCceeEecCcccccccCCCcchHHHHHHHHHHH
Q 029908 78 LGEHGCRYYT-KSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIV 120 (185)
Q Consensus 78 ~G~~G~~~~~-~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~ 120 (185)
.|++|+.+++ ++..+++|+++.+++|++||||+|+|+|+++++
T Consensus 153 ~G~~g~~~~~~~~~~~~~~~~~~~~vdt~GAGD~f~ag~~~~l~ 196 (196)
T cd00287 153 LGEKGAIVATRGGTEVHVPAFPVKVVDTTGAGDAFLAALAAGLA 196 (196)
T ss_pred ECCCccEEEecCCceEEcCCccCCcccCCCchHHHHHHHHHHhC
Confidence 9999999999 777888998888899999999999999999874
No 56
>TIGR00687 pyridox_kin pyridoxal kinase. ThiD and related proteins form an outgroup.
Probab=99.83 E-value=1.6e-19 Score=145.98 Aligned_cols=138 Identities=25% Similarity=0.250 Sum_probs=104.6
Q ss_pred HHHHcC--CeEEEcCCCCCC---CCCChHHHHHHH-HHhhccccEEEcCHHHHhHhhCCCCCCHHHH----HHhcCCCCc
Q 029908 3 AAKEAG--ALLSYDPNLRLP---LWPSPEEAREQI-MSIWDKAEVIKVSDVELEFLTGSDKIDDESA----LSLWHPNLK 72 (185)
Q Consensus 3 ~a~~~g--~~v~~D~~~~~~---~~~~~~~~~~~~-~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~----~~l~~~g~~ 72 (185)
.+++.+ +++++||+.+.. .|.. +...+.+ .++++++|+++||..|++.|++.+..+.+++ +++++.|++
T Consensus 98 ~~~~~~~~~~vv~Dpv~~d~~~~~~~~-~~~~~~~~~~ll~~adii~pN~~Ea~~L~g~~~~~~~~~~~~~~~l~~~g~~ 176 (286)
T TIGR00687 98 QVKQANPQALYVCDPVMGDPEKGCYVA-PDLLEVYREKAIPVADIITPNQFELELLTGRKINTVEEALAAADALIAMGPD 176 (286)
T ss_pred HHHHhCCCCcEEECCeeeeCCCCeeeC-hhHHHHHHHhccccccEecCCHHHHHHHhCCCcCCHHHHHHHHHHHHHhCCC
Confidence 445544 679999987642 3332 3344444 4689999999999999999999765444333 356678999
Q ss_pred EEEEE-cCCCce--------EEEEcCceeEecCcccc-cccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHH
Q 029908 73 LLLVT-LGEHGC--------RYYTKSFKGAVDAFRVK-TVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANAC 142 (185)
Q Consensus 73 ~vvit-~G~~G~--------~~~~~~~~~~~~~~~~~-~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~ 142 (185)
.|++| .|..|+ +++++++.++.+.++.+ ++|++|+||+|+|+|++++++|.+ +++++++|+++
T Consensus 177 ~Viit~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~A~~l~~l~~g~~-------~~~al~~A~~~ 249 (286)
T TIGR00687 177 IVLVTHLARAGSQRDRDFEGLVVTQEGRWHISRPLAVFMRQPVGTGDLIAALLLATLLHGNS-------LKEALEKTVSA 249 (286)
T ss_pred EEEEEeccccCCCCCcceeEEEEcCCceEEEeccCcCCCCCCCChHHHHHHHHHHHHhcCCC-------HHHHHHHHHHH
Confidence 99999 577774 44555666777766776 689999999999999999999999 99999999999
Q ss_pred hHHHhh
Q 029908 143 GALSTT 148 (185)
Q Consensus 143 aa~~~~ 148 (185)
....+.
T Consensus 250 v~~~l~ 255 (286)
T TIGR00687 250 VYHVLV 255 (286)
T ss_pred HHHHHH
Confidence 444443
No 57
>PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed
Probab=99.81 E-value=5.5e-19 Score=142.54 Aligned_cols=135 Identities=20% Similarity=0.198 Sum_probs=104.4
Q ss_pred cCCeEEEcCCCCC---CCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHH----HHhcCCCCcEEEEEcC
Q 029908 7 AGALLSYDPNLRL---PLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESA----LSLWHPNLKLLLVTLG 79 (185)
Q Consensus 7 ~g~~v~~D~~~~~---~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~----~~l~~~g~~~vvit~G 79 (185)
.+.++++||+.+. ..|.+++.......++++++|+++||..|++.|++.+..+.+++ +++.+.|++.|+||.|
T Consensus 118 ~~~~vv~DPvm~d~~~~~~~~~~~~~~~~~~Ll~~advitPN~~Ea~~L~g~~~~~~~~~~~~~~~l~~~g~~~VvIT~g 197 (281)
T PRK08176 118 PDLLIMVDPVIGDIDSGIYVKPDLPEAYRQHLLPLAQGLTPNIFELEILTGKPCRTLDSAIAAAKSLLSDTLKWVVITSA 197 (281)
T ss_pred CCCcEEeCCccccCCCCeEECccHHHHHHHHhHhhcCEeCCCHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCCEEEEeec
Confidence 4789999998665 35543333333334689999999999999999999765444332 3677789999999999
Q ss_pred CCc-------eEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhc
Q 029908 80 EHG-------CRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTK 149 (185)
Q Consensus 80 ~~G-------~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~ 149 (185)
..| ++++++++.+..+ .+...++++|+||+|+|+|++++++|.+ +++|+++|+......++.
T Consensus 198 ~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~GaGD~faa~~~a~l~~g~~-------l~~Av~~A~~~v~~~i~~ 266 (281)
T PRK08176 198 AGNEENQEMQVVVVTADSVNVIS-HPRVDTDLKGTGDLFCAELVSGLLKGKA-------LTDAAHRAGLRVLEVMRY 266 (281)
T ss_pred cCCCCCCcEEEEEEeCCceEEEe-cCccCCCCCChhHHHHHHHHHHHhcCCC-------HHHHHHHHHHHHHHHHHH
Confidence 987 5666666544443 3445579999999999999999999999 999999999888777754
No 58
>PRK12616 pyridoxal kinase; Reviewed
Probab=99.81 E-value=9.2e-19 Score=140.51 Aligned_cols=140 Identities=19% Similarity=0.143 Sum_probs=108.0
Q ss_pred HHHHcC-CeEEEcCCCCCCCCC---ChHHHHHHHHHhhccccEEEcCHHHHhHhhCC-CCCCHHHH----HHhcCCCCcE
Q 029908 3 AAKEAG-ALLSYDPNLRLPLWP---SPEEAREQIMSIWDKAEVIKVSDVELEFLTGS-DKIDDESA----LSLWHPNLKL 73 (185)
Q Consensus 3 ~a~~~g-~~v~~D~~~~~~~~~---~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~-~~~~~~~~----~~l~~~g~~~ 73 (185)
..++.+ .+|++||...+.... ..+........+++++|+++||..|++.|++. ...+.+++ +++.+.|++.
T Consensus 95 ~l~~~~~~~vV~DPV~~~~~g~~~l~~~~~~~l~~~L~~~advitpN~~Ea~~L~g~~~~~~~~~~~~aa~~l~~~G~~~ 174 (270)
T PRK12616 95 TIKEKQLKNVVIDPVMVCKGANEVLYPEHAEALREQLAPLATVITPNLFEAGQLSGMGEIKTVEQMKEAAKKIHELGAQY 174 (270)
T ss_pred HHHhcCCCCEEEccceecCCCCcccCHHHHHHHHHHhhccceEecCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHcCCCE
Confidence 445555 469999998643221 12233334445889999999999999999986 33333322 3666789999
Q ss_pred EEEEcCCCce------EEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHh
Q 029908 74 LLVTLGEHGC------RYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALST 147 (185)
Q Consensus 74 vvit~G~~G~------~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~ 147 (185)
|+||.|..|. +++++++.+.++.++++..+++|+||+|.|+|+++|++|.+ +++|+++|..+....+
T Consensus 175 VvVt~G~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~t~GaGD~fsaalaa~l~~g~~-------l~~Av~~A~~~~~~~i 247 (270)
T PRK12616 175 VVITGGGKLKHEKAVDVLYDGETAEVLESEMIDTPYTHGAGCTFSAAVTAELAKGSE-------VKEAIYAAKEFITAAI 247 (270)
T ss_pred EEEeCCCCCcCCceEEEEEECCeEEEEEeeeeCCCCCCcHHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHH
Confidence 9999998752 55666666778888888889999999999999999999999 9999999999988887
Q ss_pred hc
Q 029908 148 TK 149 (185)
Q Consensus 148 ~~ 149 (185)
..
T Consensus 248 ~~ 249 (270)
T PRK12616 248 KE 249 (270)
T ss_pred HH
Confidence 75
No 59
>KOG2854 consensus Possible pfkB family carbohydrate kinase [Carbohydrate transport and metabolism]
Probab=99.76 E-value=1.1e-17 Score=134.08 Aligned_cols=139 Identities=19% Similarity=0.268 Sum_probs=110.7
Q ss_pred HHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCC---CCCHHHH-H------HhcCCCCcE
Q 029908 4 AKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSD---KIDDESA-L------SLWHPNLKL 73 (185)
Q Consensus 4 a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~---~~~~~~~-~------~l~~~g~~~ 73 (185)
|.+.+.+.+++.+... ..+...+.+.++++|+|+++.|++|++.+.... ..+...+ . +.....++.
T Consensus 184 ~~e~~r~~~lnlsapf----I~q~~~~~l~~v~~y~DiifgNe~EA~af~~~~~~~t~dv~eia~~~~~~~k~~~~~~r~ 259 (343)
T KOG2854|consen 184 AAENNRVFTLNLSAPF----ISQFFKDALDKVLPYADIIFGNEDEAAAFARAHGWETKDVKEIALKLSALPKVNGTRPRT 259 (343)
T ss_pred HHHhcchhheeccchh----HHHHHHHHHHhhcCcceEEEcCHHHHHHHHHhhCCcccchHHHhhHhhccccccccccce
Confidence 4455556666664321 146678888999999999999999999987544 2222111 1 222256889
Q ss_pred EEEEcCCCceEEEEcCceeEecCccc---ccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhcc
Q 029908 74 LLVTLGEHGCRYYTKSFKGAVDAFRV---KTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKK 150 (185)
Q Consensus 74 vvit~G~~G~~~~~~~~~~~~~~~~~---~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~ 150 (185)
++||.|..+++...++..+.+|..+. .++|++||||+|.+||++.|.+|.+ +++|++.|+.+++.++...
T Consensus 260 vvit~g~~~~i~~~~~~v~~~~v~~~~~~~ivDtnGAGDaFvgGFl~~l~qg~~-------l~~cir~g~~aa~~vi~~~ 332 (343)
T KOG2854|consen 260 VVITQGPDPVIVAEDGKVTAYPVLPLPVEEIVDTNGAGDAFVGGFLSQLVQGKS-------LEECIRAGSYAASHVIRRV 332 (343)
T ss_pred EEEccCCCceEEecCCceEEeccccccceeeeeCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHhhheeecc
Confidence 99999999999999988887777765 6999999999999999999999999 9999999999999999999
Q ss_pred CCC
Q 029908 151 GAI 153 (185)
Q Consensus 151 g~~ 153 (185)
|+.
T Consensus 333 G~~ 335 (343)
T KOG2854|consen 333 GCT 335 (343)
T ss_pred CCC
Confidence 985
No 60
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.74 E-value=1.1e-17 Score=136.92 Aligned_cols=142 Identities=27% Similarity=0.294 Sum_probs=122.7
Q ss_pred ChHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHH---HHHhcC-CCCcEEEE
Q 029908 1 MKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDES---ALSLWH-PNLKLLLV 76 (185)
Q Consensus 1 l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~---~~~l~~-~g~~~vvi 76 (185)
++.||++|+||.+||.... .+.+..+++|+||..|++...|....+.+- .++|.+ .+...+++
T Consensus 164 I~~ar~~~~pVLvDPKg~D-------------f~~Y~GAtLiTPN~~E~~~~vg~~~~e~el~~~g~kL~~~~~L~alLv 230 (467)
T COG2870 164 IDLAREAGIPVLVDPKGKD-------------FEKYRGATLITPNLKEFEEAVGKCKSEEELEERGQKLKEELDLSALLV 230 (467)
T ss_pred HHHHHHcCCcEEECCCCcc-------------hhhhCCCeecCCCHHHHHHHHcccccHHHHHHHHHHHHHhhCcceEEE
Confidence 4689999999999997532 234568999999999999999988765321 224543 78899999
Q ss_pred EcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCC
Q 029908 77 TLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPAL 156 (185)
Q Consensus 77 t~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~ 156 (185)
|++.+|..++..++..|+|+...++.|.|||||+-.|.|+.+++.|.+ +++|+.+||++|+..+.+.|+. .
T Consensus 231 TRsE~GMtL~~~~~~~h~pt~AkEVyDVTGAGDTVIa~la~~laaG~s-------~~eAc~lAN~AagiVVgKlGTa--t 301 (467)
T COG2870 231 TRSEKGMTLFQEGKPLHFPARAKEVYDVTGAGDTVIAVLAAALAAGAS-------LEEACELANAAAGIVVGKLGTA--T 301 (467)
T ss_pred EeccCCceeecCCcccccchhheeeeeccCCCchHHHHHHHHHHcCCC-------HHHHHHHhhhhcceEEeeccce--e
Confidence 999999999998888999999999999999999999999999999999 9999999999999999999975 3
Q ss_pred CCHHHHHH
Q 029908 157 PTESEALA 164 (185)
Q Consensus 157 ~~~~~i~~ 164 (185)
.+.+|+..
T Consensus 302 vs~~EL~n 309 (467)
T COG2870 302 VSPEELEM 309 (467)
T ss_pred ecHHHHHh
Confidence 57788876
No 61
>PTZ00344 pyridoxal kinase; Provisional
Probab=99.72 E-value=2.1e-16 Score=128.43 Aligned_cols=137 Identities=18% Similarity=0.146 Sum_probs=101.7
Q ss_pred HHHcC--CeEEEcCCC--CCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHH----HHhcCCCCcEEE
Q 029908 4 AKEAG--ALLSYDPNL--RLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESA----LSLWHPNLKLLL 75 (185)
Q Consensus 4 a~~~g--~~v~~D~~~--~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~----~~l~~~g~~~vv 75 (185)
+++++ +++++||+. +..+|. .+.+.+.+.++++++|+++||..|++.|+|.+..+.+++ +++.+.|++.||
T Consensus 102 ~~~~~~~~~vv~DPv~~~~g~l~~-~~~~~~~~~~ll~~~dii~pN~~E~~~L~g~~~~~~~~~~~~~~~l~~~g~~~Vv 180 (296)
T PTZ00344 102 IKELRPKLIFLCDPVMGDDGKLYV-KEEVVDAYRELIPYADVITPNQFEASLLSGVEVKDLSDALEAIDWFHEQGIPVVV 180 (296)
T ss_pred HHHhCCCceEEECCccccCCceEe-CHHHHHHHHHHhhhCCEEeCCHHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCEEE
Confidence 34454 589999876 345674 567778888999999999999999999999764443332 356667999999
Q ss_pred EE---cCCCc----eEEEEc------CceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHH
Q 029908 76 VT---LGEHG----CRYYTK------SFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANAC 142 (185)
Q Consensus 76 it---~G~~G----~~~~~~------~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~ 142 (185)
|| .|..| +++.+. ++.+.+..++++ .+++|+||+|+|+|++.+++| + +.+++++|.+.
T Consensus 181 VTg~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~GaGD~f~A~~~a~l~~g-~-------~~~a~~~A~a~ 251 (296)
T PTZ00344 181 ITSFREDEDPTHLRFLLSCRDKDTKNNKRFTGKVPYIE-GRYTGTGDLFAALLLAFSHQH-P-------MDLAVGKAMGV 251 (296)
T ss_pred EEeecCCCCCCcEEEEEEeccccCCCceeEEEeccccC-CCCCCchHHHHHHHHHHHhcC-C-------HHHHHHHHHHH
Confidence 99 44445 344321 234556666655 467999999999999888888 8 99999999988
Q ss_pred hHHHhhcc
Q 029908 143 GALSTTKK 150 (185)
Q Consensus 143 aa~~~~~~ 150 (185)
....++..
T Consensus 252 ~~~~i~~~ 259 (296)
T PTZ00344 252 LQDIIKAT 259 (296)
T ss_pred HHHHHHHH
Confidence 88776553
No 62
>PTZ00347 phosphomethylpyrimidine kinase; Provisional
Probab=99.70 E-value=3.5e-16 Score=135.54 Aligned_cols=135 Identities=18% Similarity=0.143 Sum_probs=103.6
Q ss_pred CCeEEEcCCCCC----CCCCC--hHHHHHHH-HHhhccccEEEcCHHHHhHhhCCC-CCCHHHH----HHhcCCCCcEEE
Q 029908 8 GALLSYDPNLRL----PLWPS--PEEAREQI-MSIWDKAEVIKVSDVELEFLTGSD-KIDDESA----LSLWHPNLKLLL 75 (185)
Q Consensus 8 g~~v~~D~~~~~----~~~~~--~~~~~~~~-~~~l~~~dii~~n~~E~~~l~~~~-~~~~~~~----~~l~~~g~~~vv 75 (185)
+.+|++||..+. .++.. .+...+.+ .++++++|+|+||..|++.|+|.+ ..+.+++ +.+.+.|++.|+
T Consensus 323 ~~~vV~DPV~~~~~G~~l~~~~~~~~~~~~~~~~Ll~~advitPN~~Ea~~L~g~~~~~~~~~~~~aa~~l~~~G~~~Vv 402 (504)
T PTZ00347 323 NLPMVVDPVLVATSGDDLVAQKNADDVLAMYKERIFPMATIITPNIPEAERILGRKEITGVYEARAAAQALAQYGSRYVL 402 (504)
T ss_pred CCCEEEcccceeCCCCcccchhHHHHHHHHHHHhccCcceEEeCCHHHHHHHhCCCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 678999998753 23321 12223333 368899999999999999999964 3332222 366678999999
Q ss_pred EEcCCCc-------eEEEEc--CceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHH
Q 029908 76 VTLGEHG-------CRYYTK--SFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALS 146 (185)
Q Consensus 76 it~G~~G-------~~~~~~--~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~ 146 (185)
||.|..| ..++.+ +..++++.+++++++++|+||+|+|+|++++++|.+ +.+|++.|.......
T Consensus 403 Vtgg~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~~~~~~GaGD~fsaaiaa~la~G~~-------l~eAv~~A~~~v~~~ 475 (504)
T PTZ00347 403 VKGGHDLIDPEACRDVLYDREKDRFYEFTANRIATINTHGTGCTLASAISSFLARGYT-------VPDAVERAIGYVHEA 475 (504)
T ss_pred EeCCCCCcCCCcceEEEEcCCCCeEEEEEeeeECCCCCCChHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHH
Confidence 9999863 445543 346778888888999999999999999999999999 999999999888877
Q ss_pred hhc
Q 029908 147 TTK 149 (185)
Q Consensus 147 ~~~ 149 (185)
+..
T Consensus 476 i~~ 478 (504)
T PTZ00347 476 IVR 478 (504)
T ss_pred HHh
Confidence 765
No 63
>PLN02898 HMP-P kinase/thiamin-monophosphate pyrophosphorylase
Probab=99.70 E-value=4.9e-16 Score=134.60 Aligned_cols=141 Identities=18% Similarity=0.136 Sum_probs=107.5
Q ss_pred HHHHcCCe-EEEcCCCCCCCCC--ChHHHHHHH-HHhhccccEEEcCHHHHhHhhCCC-CCCHHH----HHHhcCCCCcE
Q 029908 3 AAKEAGAL-LSYDPNLRLPLWP--SPEEAREQI-MSIWDKAEVIKVSDVELEFLTGSD-KIDDES----ALSLWHPNLKL 73 (185)
Q Consensus 3 ~a~~~g~~-v~~D~~~~~~~~~--~~~~~~~~~-~~~l~~~dii~~n~~E~~~l~~~~-~~~~~~----~~~l~~~g~~~ 73 (185)
.+++.+.+ |++||........ ..+...+.+ .++++++|+++||..|++.|++.. ..+.++ ++++.+.|++.
T Consensus 99 ~l~~~~~~~vVlDPV~~~~~G~~l~~~~~~~~l~~~Ll~~adiitPN~~Ea~~L~g~~~~~~~~~~~~~a~~l~~~G~~~ 178 (502)
T PLN02898 99 ALKEFPVKALVVDPVMVSTSGDVLAGPSILSALREELLPLATIVTPNVKEASALLGGDPLETVADMRSAAKELHKLGPRY 178 (502)
T ss_pred HHHhCCCCCEEEccccccCCCCccCCHHHHHHHHHhhhccCeEEcCCHHHHHHHhCCCCCCCHHHHHHHHHHHHhcCCCE
Confidence 45666774 9999976432211 122333344 478999999999999999999753 222222 23666789999
Q ss_pred EEEEcCCCc------eEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHh
Q 029908 74 LLVTLGEHG------CRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALST 147 (185)
Q Consensus 74 vvit~G~~G------~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~ 147 (185)
|+||.|..+ .++++++..++++.++++.++++|+||+|.|+|++++++|.+ +++|+++|..+....+
T Consensus 179 VvItgg~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~t~GaGD~fsaaiaa~l~~G~~-------l~eAv~~A~~~v~~ai 251 (502)
T PLN02898 179 VLVKGGHLPDSLDAVDVLYDGTEFHELRSSRIKTRNTHGTGCTLASCIAAELAKGSD-------MLSAVKVAKRYVETAL 251 (502)
T ss_pred EEEcCCCCCCCCcceEEEEcCCeEEEEecceeCCCCCCchhhhHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHH
Confidence 999999753 356666666778888888899999999999999999999999 9999999999999988
Q ss_pred hcc
Q 029908 148 TKK 150 (185)
Q Consensus 148 ~~~ 150 (185)
.+.
T Consensus 252 ~~~ 254 (502)
T PLN02898 252 EYS 254 (502)
T ss_pred Hhh
Confidence 764
No 64
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2.7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D ....
Probab=99.70 E-value=3.3e-16 Score=124.15 Aligned_cols=140 Identities=21% Similarity=0.200 Sum_probs=101.7
Q ss_pred HHHHcCCeEEEcCCCCCC---CCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHH----HhcCCCCcEEE
Q 029908 3 AAKEAGALLSYDPNLRLP---LWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESAL----SLWHPNLKLLL 75 (185)
Q Consensus 3 ~a~~~g~~v~~D~~~~~~---~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~----~l~~~g~~~vv 75 (185)
..++.+.++++||..... .+..++.......+++|++|+|+||..|++.|++....+.+++. ++++.|++.|+
T Consensus 81 ~l~~~~~~vV~DPVm~~~~g~~~~~~~~~~~~~~~Llp~AdiitPN~~Ea~~L~g~~i~~~~~~~~~~~~l~~~G~~~Vv 160 (246)
T PF08543_consen 81 FLKKPKIPVVLDPVMGDSGGYYYVDPDVVEAMREELLPLADIITPNLTEAELLTGREINSEEDIEEAAKALLALGPKNVV 160 (246)
T ss_dssp HHHHTTTEEEEE---EETTTECTSSHHHHHHHHHHCGGG-SEEE-BHHHHHHHHTS--SSHHHHHHHHHHHHHTS-SEEE
T ss_pred HHhccCCCEEEecccccCCCCcCCCHHHHHHHHhccCCcCeEEeCCHHHHHHHhCCCCCChHhHHHHHHHHHHhCCceEE
Confidence 345677899999976531 22223344444445999999999999999999997766655443 67779999999
Q ss_pred EEcCCC----c---eEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhh
Q 029908 76 VTLGEH----G---CRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTT 148 (185)
Q Consensus 76 it~G~~----G---~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~ 148 (185)
||.+.. + .+++++++.+.++.+..+..+.+|+||.|.|++++.|++|.+ +++|++.|.......++
T Consensus 161 Itg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~GTGd~fss~laa~l~~g~~-------l~~Av~~A~~~v~~~i~ 233 (246)
T PF08543_consen 161 ITGGHLDGDEGIITDVLYDGGEFYWLSSPRIPTGSFHGTGDLFSSALAAFLAKGYS-------LEEAVEKAKNFVRRAIK 233 (246)
T ss_dssp EEEEEGGSSCEEEEEEEETTSEEEEEEEEEECTSGCTTHHHHHHHHHHHHHHTTSS-------HHHHHHHHHHHHHHHHH
T ss_pred EeeeccccccccccceeeeccceeecceeEEcCCCCCCchhHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHH
Confidence 999863 1 444556677777777666678999999999999999999999 99999999988777766
Q ss_pred c
Q 029908 149 K 149 (185)
Q Consensus 149 ~ 149 (185)
+
T Consensus 234 ~ 234 (246)
T PF08543_consen 234 N 234 (246)
T ss_dssp H
T ss_pred H
Confidence 3
No 65
>COG0351 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism]
Probab=99.69 E-value=9.3e-16 Score=120.94 Aligned_cols=139 Identities=21% Similarity=0.161 Sum_probs=113.1
Q ss_pred HHHHcC-CeEEEcCCCCCCCCCC---hHHHHHHHHHhhccccEEEcCHHHHhHhhCC-CCCCHHHHH----HhcCCCCcE
Q 029908 3 AAKEAG-ALLSYDPNLRLPLWPS---PEEAREQIMSIWDKAEVIKVSDVELEFLTGS-DKIDDESAL----SLWHPNLKL 73 (185)
Q Consensus 3 ~a~~~g-~~v~~D~~~~~~~~~~---~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~-~~~~~~~~~----~l~~~g~~~ 73 (185)
..++.+ .++++||.+....... ++.......+++|++++++||..|++.|.|. ...+.++++ .+.+.|++.
T Consensus 93 ~l~~~~~~~vV~DPVmvaksG~~Ll~~~a~~~l~~~LlP~a~vvTPNl~EA~~L~g~~~i~~~~d~~~a~~~i~~~g~~~ 172 (263)
T COG0351 93 KLKKYGIGPVVLDPVMVAKSGDPLLDEEAVEALREELLPLATVVTPNLPEAEALSGLPKIKTEEDMKEAAKLLHELGAKA 172 (263)
T ss_pred HHHhcCCCcEEECceEEEcCCCcccChHHHHHHHHHhhccCeEecCCHHHHHHHcCCCccCCHHHHHHHHHHHHHhCCCE
Confidence 445666 7799999776544442 3344444458999999999999999999995 665555554 444789999
Q ss_pred EEEEcCCCc----eEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhh
Q 029908 74 LLVTLGEHG----CRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTT 148 (185)
Q Consensus 74 vvit~G~~G----~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~ 148 (185)
|+|+.|... .+++.++..+.++.+.++..+++|+|++|.|++++.|++|.+ +.+|++.|-..-...++
T Consensus 173 VliKGGH~~~~~~D~l~~~~~~~~f~~~ri~t~~tHGTGCTlSaAIaa~LA~G~~-------l~~AV~~Ak~fv~~AI~ 244 (263)
T COG0351 173 VLIKGGHLEGEAVDVLYDGGSFYTFEAPRIPTKNTHGTGCTLSAAIAANLAKGLS-------LEEAVKKAKEFVTRAIR 244 (263)
T ss_pred EEEcCCCCCCCceeEEEcCCceEEEeccccCCCCCCCccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHh
Confidence 999998743 566777778888999999999999999999999999999999 99999999988888887
No 66
>PLN02978 pyridoxal kinase
Probab=99.66 E-value=4.3e-15 Score=121.37 Aligned_cols=134 Identities=18% Similarity=0.127 Sum_probs=98.6
Q ss_pred cCCeEEEcCCCCC--CCCCChHHHHHHHH-HhhccccEEEcCHHHHhHhhCCCCCCHHHH----HHhcCCCCcEEEEEcC
Q 029908 7 AGALLSYDPNLRL--PLWPSPEEAREQIM-SIWDKAEVIKVSDVELEFLTGSDKIDDESA----LSLWHPNLKLLLVTLG 79 (185)
Q Consensus 7 ~g~~v~~D~~~~~--~~~~~~~~~~~~~~-~~l~~~dii~~n~~E~~~l~~~~~~~~~~~----~~l~~~g~~~vvit~G 79 (185)
.++++++||+++. .+|.. +...+.+. ++++++|+++||..|++.|++.+..+.+++ +++.+.|++.||||.+
T Consensus 116 ~~~~vvlDPvm~d~G~l~~~-~~~~~~~~~~ll~~adiitPN~~Ea~~L~g~~~~~~~~~~~a~~~l~~~g~~~VVITs~ 194 (308)
T PLN02978 116 PNLTYVCDPVLGDEGKLYVP-PELVPVYREKVVPLATMLTPNQFEAEQLTGIRIVTEEDAREACAILHAAGPSKVVITSI 194 (308)
T ss_pred CCCeEEECCcccCCCCccCC-hhHHHHHHHHHHhhCCeeccCHHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCEEEEEEe
Confidence 4578999999876 45643 34555554 699999999999999999999765443322 3566789999999875
Q ss_pred C-CceEEEEc---------CceeEecCcccccccCCCcchHHHHHHHHHHHcc-CCCCCChHHHHHHHHHHHHHhHHHhh
Q 029908 80 E-HGCRYYTK---------SFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDD-QSAIEDEPRLREILKFANACGALSTT 148 (185)
Q Consensus 80 ~-~G~~~~~~---------~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g-~~~~~~~~~~~~a~~~a~~~aa~~~~ 148 (185)
. .|...... ++.++++.++.+.. .+|+||+|+|++++.+++| .+ +++|++.|.......++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~GtGD~fsA~laa~l~~g~~~-------l~~A~~~A~~~v~~~i~ 266 (308)
T PLN02978 195 DIDGKLLLVGSHRKEKGARPEQFKIVIPKIPAY-FTGTGDLMAALLLGWSHKYPDN-------LDKAAELAVSSLQAVLR 266 (308)
T ss_pred cCCCCEEEEEecccccCCCCceEEEEccCCCCC-CCCchHHHHHHHHHHHhcCCcC-------HHHHHHHHHHHHHHHHH
Confidence 4 34332211 24566777666655 5899999999988888887 68 99999999988776665
Q ss_pred c
Q 029908 149 K 149 (185)
Q Consensus 149 ~ 149 (185)
.
T Consensus 267 ~ 267 (308)
T PLN02978 267 R 267 (308)
T ss_pred H
Confidence 5
No 67
>PRK14713 multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional
Probab=99.65 E-value=4e-15 Score=129.63 Aligned_cols=132 Identities=22% Similarity=0.185 Sum_probs=100.5
Q ss_pred CCeEEEcCCCCC----CCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCC-CCHHHH----HHhcCCCCcEEEEEc
Q 029908 8 GALLSYDPNLRL----PLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDK-IDDESA----LSLWHPNLKLLLVTL 78 (185)
Q Consensus 8 g~~v~~D~~~~~----~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~-~~~~~~----~~l~~~g~~~vvit~ 78 (185)
+.+|++||+.+. .++ .+...+.+.++++++|+|+||..|++.|+|.+. .+.+++ +++.+.+...||||.
T Consensus 125 ~~~vVlDPv~~~~~G~~l~--~~~~~~~~~~Ll~~advItPN~~Ea~~Ltg~~~~~~~~d~~~aa~~L~~~~g~~VvItg 202 (530)
T PRK14713 125 PPVVVLDPVMVATSGDRLL--EEDAEAALRELVPRADLITPNLPELAVLLGEPPATTWEEALAQARRLAAETGTTVLVKG 202 (530)
T ss_pred CCCEEECCcccCCCCCCCC--CHHHHHHHHHHhhhhheecCChHHHHHHhCCCCCCCHHHHHHHHHHHHHhcCCEEEEeC
Confidence 346999998864 233 345667778899999999999999999998753 233332 355555556899998
Q ss_pred CCCc-----eEEEEc-CceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhh
Q 029908 79 GEHG-----CRYYTK-SFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTT 148 (185)
Q Consensus 79 G~~G-----~~~~~~-~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~ 148 (185)
|..+ ..++.. ++.++++.++++.++++|+||+|.|+|+++|++|.+ +.++++.|...-...+.
T Consensus 203 G~~~~~~~~d~~~~~~~~~~~~~~~~v~~~~t~GaGD~fsaalaa~La~G~~-------l~eAv~~A~~~v~~~i~ 271 (530)
T PRK14713 203 GHLDGQRAPDALVGPDGAVTEVPGPRVDTRNTHGTGCSLSSALATRLGRGGD-------WAAALRWATAWLHGAIA 271 (530)
T ss_pred CCCCCCcceEEEEcCCCeEEEEeeeeeCCCCCCcHHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHHH
Confidence 8642 344443 346778888888899999999999999999999999 99999999985554443
No 68
>PRK09517 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional
Probab=99.64 E-value=3.5e-15 Score=134.61 Aligned_cols=141 Identities=18% Similarity=0.170 Sum_probs=105.7
Q ss_pred HHHH-cCCeEEEcCCCCCCCCCC--hHHHHHHHHHhhccccEEEcCHHHHhHhhCCC-CCCHHHH----HHhcCCCCcEE
Q 029908 3 AAKE-AGALLSYDPNLRLPLWPS--PEEAREQIMSIWDKAEVIKVSDVELEFLTGSD-KIDDESA----LSLWHPNLKLL 74 (185)
Q Consensus 3 ~a~~-~g~~v~~D~~~~~~~~~~--~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~-~~~~~~~----~~l~~~g~~~v 74 (185)
.+++ .+.+|++||..+...... .+...+.+.++++++|+|+||..|++.|++.. ..+.+++ +++.+.+...|
T Consensus 331 ~l~~~~~~~vVlDPV~~~~sG~~l~~~~~~~~l~~Llp~adlItPN~~Ea~~L~g~~~~~~~~d~~~aa~~L~~~~g~~V 410 (755)
T PRK09517 331 WLGSHEHGPVVLDPVMVATSGDRLLDADATEALRRLAVHVDVVTPNIPELAVLCGEAPAITMDEAIAQARGFARTHGTIV 410 (755)
T ss_pred HHHhCCCCCEEEecccccCCCCCCCCHHHHHHHHHHhCcccCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhcCCEE
Confidence 3445 357799999876432111 23444556689999999999999999999853 2232322 35555444589
Q ss_pred EEEcCC------CceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhh
Q 029908 75 LVTLGE------HGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTT 148 (185)
Q Consensus 75 vit~G~------~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~ 148 (185)
|||.|. .|+++..++..++++.++++.++++|+||+|.|+|+++|++|.+ +++|++.|.......+.
T Consensus 411 VVkgGh~~~~~~~~~l~~~~~~~~~~~~~~v~~~~t~GaGDtfsaaiaa~La~G~s-------l~eAv~~A~~~v~~~i~ 483 (755)
T PRK09517 411 IVKGGHLTGDLADNAVVRPDGSVHQVENPRVNTTNSHGTGCSLSAALATLIAAGES-------VEKALEWATRWLNEALR 483 (755)
T ss_pred EEcCCcCCCCccceEEEeCCCeEEEEeecccCCCCCcChHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHHH
Confidence 999984 45665555556788888899999999999999999999999999 99999999998888886
Q ss_pred cc
Q 029908 149 KK 150 (185)
Q Consensus 149 ~~ 150 (185)
+.
T Consensus 484 ~a 485 (755)
T PRK09517 484 HA 485 (755)
T ss_pred hc
Confidence 53
No 69
>cd01171 YXKO-related B.subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily.
Probab=99.52 E-value=1.4e-13 Score=109.32 Aligned_cols=131 Identities=15% Similarity=-0.007 Sum_probs=95.2
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHH--HhhccccEEEcCHHHHhHhhCCCCCCH-----HHHHHhcCCCCcEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIM--SIWDKAEVIKVSDVELEFLTGSDKIDD-----ESALSLWHPNLKLL 74 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~--~~l~~~dii~~n~~E~~~l~~~~~~~~-----~~~~~l~~~g~~~v 74 (185)
+.++++++|+++|+... ....... .+++.+++++||..|++.|++....+. +.++++.+.+. .+
T Consensus 98 ~~~~~~~~pvVlDa~~~--------~~~~~~~~~~~~~~~~iltPn~~E~~~L~g~~~~~~~~~~~~~a~~l~~~~~-~~ 168 (254)
T cd01171 98 EKALAKDKPLVLDADAL--------NLLADEPSLIKRYGPVVLTPHPGEFARLLGALVEEIQADRLAAAREAAAKLG-AT 168 (254)
T ss_pred HHHHhcCCCEEEEcHHH--------HHhhcChhhhccCCCEEECCCHHHHHHHhCCChhhhhhHHHHHHHHHHHHcC-cE
Confidence 45677899999998631 1111000 246789999999999999998754321 12235555554 45
Q ss_pred EEEcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhc
Q 029908 75 LVTLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTK 149 (185)
Q Consensus 75 vit~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~ 149 (185)
|+..| .+.+++++++.++++....+.++++|+||+|+|.+++.+++|.+ +.+|+++|+.+.+.+.+.
T Consensus 169 vvlkG-~~~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~g~~-------~~eA~~~A~~~~~~a~~~ 235 (254)
T cd01171 169 VVLKG-AVTVIADPDGRVYVNPTGNPGLATGGSGDVLAGIIAALLAQGLS-------PLEAAALAVYLHGLAGDL 235 (254)
T ss_pred EEEcC-CCCEEECCCCcEEEECCCCcccccCchHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHHH
Confidence 55667 46777776556677777778899999999998888888889999 999999999888887764
No 70
>cd01170 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz. A reaction that allows cells to recycle Thz into the thiamine biosynthesis pathway, as an alternative to its synthesis from cysteine, tyrosine and 1-deoxy-D-xylulose-5-phosphate.
Probab=99.48 E-value=1.5e-12 Score=103.00 Aligned_cols=133 Identities=18% Similarity=0.088 Sum_probs=94.0
Q ss_pred HHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhcc--ccEEEcCHHHHhHhhCCCCCC---------HHH----HHHhc
Q 029908 3 AAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDK--AEVIKVSDVELEFLTGSDKID---------DES----ALSLW 67 (185)
Q Consensus 3 ~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~--~dii~~n~~E~~~l~~~~~~~---------~~~----~~~l~ 67 (185)
.+++.++|+++||...... .. ..+.+.++++. +|+|+||..|++.|++.+... .++ ++++.
T Consensus 74 ~~~~~~~pvVlDp~~~~~~---~~-~~~~~~~ll~~~~~~ilTPN~~Ea~~L~g~~~~~~~~~~~~~~~~~~~~aa~~l~ 149 (242)
T cd01170 74 AANQLGKPVVLDPVGVGAT---SF-RTEVAKELLAEGQPTVIRGNASEIAALAGLTGLGKGVDSSSSDEEDALELAKALA 149 (242)
T ss_pred HHHhcCCCEEEcccccCcc---hh-HHHHHHHHHhcCCCeEEcCCHHHHHHHhCCCCCcCcccCCCcchHHHHHHHHHHH
Confidence 4778899999999754211 11 12334555665 999999999999999865321 222 23555
Q ss_pred CCCCcEEEEEcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHh
Q 029908 68 HPNLKLLLVTLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALST 147 (185)
Q Consensus 68 ~~g~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~ 147 (185)
+.+...|++| |... +++++++.++++..+..+.+.+|+||+|.|+++..+++|.+ +.+|+..|...-+...
T Consensus 150 ~~~~~~Vllk-G~~d-~l~~~~~~~~~~~~~~~~~~v~GtGdtLa~aiAa~LA~g~~-------~~~A~~~A~~~~~~a~ 220 (242)
T cd01170 150 RKYGAVVVVT-GEVD-YITDGERVVVVKNGHPLLTKITGTGCLLGAVIAAFLAVGDD-------PLEAAVSAVLVYGIAG 220 (242)
T ss_pred HHhCCEEEEE-CCCc-EEEECCEEEEEeCCCccccCCCchHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHHH
Confidence 5455578888 5444 45666777778765555556699999999999999999999 9999999976655554
Q ss_pred h
Q 029908 148 T 148 (185)
Q Consensus 148 ~ 148 (185)
.
T Consensus 221 ~ 221 (242)
T cd01170 221 E 221 (242)
T ss_pred H
Confidence 3
No 71
>PTZ00493 phosphomethylpyrimidine kinase; Provisional
Probab=99.45 E-value=2.4e-12 Score=105.16 Aligned_cols=132 Identities=13% Similarity=0.038 Sum_probs=95.4
Q ss_pred eEEEcCCCCCCCCCC--h-HHH-HHHHHHhhccccEEEcCHHHHhHhhC-----CCCCCHHH----HHHhcC-CCCcEEE
Q 029908 10 LLSYDPNLRLPLWPS--P-EEA-REQIMSIWDKAEVIKVSDVELEFLTG-----SDKIDDES----ALSLWH-PNLKLLL 75 (185)
Q Consensus 10 ~v~~D~~~~~~~~~~--~-~~~-~~~~~~~l~~~dii~~n~~E~~~l~~-----~~~~~~~~----~~~l~~-~g~~~vv 75 (185)
+|++||......... . ... .....+++|++++|+||..|++.|.+ ... ..++ ++++.+ .|++.|+
T Consensus 107 ~vVlDPVl~sssG~~L~~~~~~~~~~~~~Llp~a~viTPN~~Ea~~L~g~~~~~~~~-~~~~~~~aA~~l~~~~G~~~Vl 185 (321)
T PTZ00493 107 LVVFDPVFVSSSGCLLVENLEYIKFALDLICPISCIITPNFYECKVILEALDCQMDL-SKANMTELCKLVTEKLNINACL 185 (321)
T ss_pred eEEECCceEECCCCccCCcHHHHHHHHHHhhccCEEECCCHHHHHHHhCCCcccCCC-CHHHHHHHHHHHHHhcCCCEEE
Confidence 599999776543331 1 233 44445699999999999999999987 221 2222 235654 6999999
Q ss_pred EEcCCCc------------eEEEEc---------------C------ceeEecCcccccccCCCcchHHHHHHHHHHHcc
Q 029908 76 VTLGEHG------------CRYYTK---------------S------FKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDD 122 (185)
Q Consensus 76 it~G~~G------------~~~~~~---------------~------~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g 122 (185)
|+.|... .+++.. + ..+.+..++.+..+++|+||+|.+++++.|++|
T Consensus 186 iKGGh~~~~~~~~~~~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~hGTGc~fASAIAa~LA~G 265 (321)
T PTZ00493 186 FKSCNVGENSAEENEVYAVDHLCIRNVGSYPTGEKQQIDAGGVTYLYDVYKLRSKRKPGKDIHGTGCTLSTAIACYLAKK 265 (321)
T ss_pred ECcCCCcccccccccccceeEEecCCccccccccccccccccccccceEEEEEecccCCCCCCChHHHHHHHHHHHHHcC
Confidence 9988632 133321 1 134566666666788999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHHHHhHHHhhc
Q 029908 123 QSAIEDEPRLREILKFANACGALSTTK 149 (185)
Q Consensus 123 ~~~~~~~~~~~~a~~~a~~~aa~~~~~ 149 (185)
.+ +++|++.|.......+..
T Consensus 266 ~~-------l~~Av~~A~~fv~~aI~~ 285 (321)
T PTZ00493 266 HN-------ILQSCIESKKYIYNCIRY 285 (321)
T ss_pred CC-------HHHHHHHHHHHHHHHHHH
Confidence 99 999999999887777765
No 72
>TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related. The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis.
Probab=99.45 E-value=1.5e-12 Score=104.56 Aligned_cols=148 Identities=12% Similarity=0.028 Sum_probs=99.0
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHH----HHhcCCCCcEEEEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESA----LSLWHPNLKLLLVT 77 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~----~~l~~~g~~~vvit 77 (185)
+.+++.+.|+++|+.. ...........+.+++|+||..|++.|++....+.++. +++.+. .+.+|++
T Consensus 113 ~~~~~~~~pvVlDa~g--------~~l~~~~~~~~~~~~vItPN~~El~~L~g~~~~~~~~~~~aa~~l~~~-~~~vVv~ 183 (272)
T TIGR00196 113 EEVLELDKPVVLDADA--------LNLLTYDKPKREGEVILTPHPGEFKRLLGLVNEIQGDRLEAAQDIAQK-LQAVVVL 183 (272)
T ss_pred HHHHhcCCCEEEEhHH--------HHHHhhcccccCCCEEECCCHHHHHHHhCCchhhhhhHHHHHHHHHHH-hCCEEEE
Confidence 4567789999999852 22222211113468999999999999998754332222 244443 4468888
Q ss_pred cCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHH---HHHhHHHhhcc-CCC
Q 029908 78 LGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFA---NACGALSTTKK-GAI 153 (185)
Q Consensus 78 ~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a---~~~aa~~~~~~-g~~ 153 (185)
.|..+.++...+..+.. ..+....+++|+||++.|.+++.+++|.+ +.+|+..| +..|+..+.+. |..
T Consensus 184 kG~~~~i~~~~~~~~~~-~~~~~~~~~~GaGD~lag~iaa~la~g~~-------~~~A~~~a~~~~~~a~~~~~~~~g~~ 255 (272)
T TIGR00196 184 KGAADVIAAPDGDLWIN-KTGNAALAKGGTGDVLAGLIGGLLAQNLD-------PFDAACNAAFAHGLAGDLALKNHGAY 255 (272)
T ss_pred cCCCCEEEcCCCeEEEE-CCCCCccCCCCchHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 89888866544444544 44556778999999976666666779998 99999777 77777766444 543
Q ss_pred CCCCCHHHHHHHHhc
Q 029908 154 PALPTESEALALLKR 168 (185)
Q Consensus 154 ~~~~~~~~i~~~~~~ 168 (185)
+ ...+||.+.+.+
T Consensus 256 -~-~~~~dl~~~i~~ 268 (272)
T TIGR00196 256 -G-LTALDLIEKIPR 268 (272)
T ss_pred -C-cCHHHHHHHHHH
Confidence 3 366777766643
No 73
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=99.45 E-value=2.1e-12 Score=102.55 Aligned_cols=132 Identities=27% Similarity=0.239 Sum_probs=100.7
Q ss_pred CCeEEEcCCCCC--CCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHH----HhcCCCCcEEEEEcCCC
Q 029908 8 GALLSYDPNLRL--PLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESAL----SLWHPNLKLLLVTLGEH 81 (185)
Q Consensus 8 g~~v~~D~~~~~--~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~----~l~~~g~~~vvit~G~~ 81 (185)
...+++||.+.. .+|...+....+..+++|.+|+++||..|++.|+|.+..+.++++ .|...|++.|+||+-..
T Consensus 104 ~~~~l~DPVMGD~gglYV~~~~~~~~~~~lip~AdiiTPN~fELe~Ltg~~~~~~~da~~aa~~L~~~gp~~vlVTS~~~ 183 (281)
T COG2240 104 NALYLCDPVMGDPGGLYVAPEVAEAYRDELLPLADIITPNIFELEILTGKPLNTLDDAVKAARKLGADGPKIVLVTSLSR 183 (281)
T ss_pred CeEEEeCCcccCCCceeeccchHHHHHHhhcchhhEeCCCHHHHHHHhCCCCCCHHHHHHHHHHHhhcCCCEEEEecccc
Confidence 456999996643 577655555666668999999999999999999999987766554 55568999999997443
Q ss_pred -----ceEEEEcC---ceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhh
Q 029908 82 -----GCRYYTKS---FKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTT 148 (185)
Q Consensus 82 -----G~~~~~~~---~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~ 148 (185)
|..++... ...|+. +.++. ..+|.||.|+|.|++++++|.+ ..+++..+..+-...+.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~h~~-~~v~~-~~~GtGDL~sallla~lL~g~~-------~~~al~~~~~~V~evl~ 249 (281)
T COG2240 184 AGMSTGNFEMLGKSAELAWHIS-PLVPF-IPNGTGDLFSALLLARLLEGLS-------LTQALERATAAVYEVLQ 249 (281)
T ss_pred cCCCCceEEEeccchhhhhhhh-hcCCC-CCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHH
Confidence 45555443 233333 23333 3899999999999999999999 99999999987776665
No 74
>KOG2947 consensus Carbohydrate kinase [Carbohydrate transport and metabolism]
Probab=99.44 E-value=5.6e-13 Score=103.00 Aligned_cols=129 Identities=23% Similarity=0.282 Sum_probs=98.9
Q ss_pred cCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHH--HhcC-CCCcEEEEEcCCCce
Q 029908 7 AGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESAL--SLWH-PNLKLLLVTLGEHGC 83 (185)
Q Consensus 7 ~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~--~l~~-~g~~~vvit~G~~G~ 83 (185)
.++.|++|... .++...+++..+|+++.+.+-++.+.-....+..... +... ...+.+|+.++++|+
T Consensus 164 qrI~vSvd~en----------~req~~~l~am~DyVf~sK~~a~~~gfks~rea~~~l~~r~~~~~pkpv~I~~w~~eGA 233 (308)
T KOG2947|consen 164 QRIRVSVDVEN----------PREQLFQLFAMCDYVFVSKDVAKHLGFKSPREACEGLYGRVPKGKPKPVLICPWASEGA 233 (308)
T ss_pred ceEEEEEEecC----------cHHHHHHHhhcccEEEEEHHHHhhhccCCHHHHHHHHHhhcccCCCCcEEEeccccccc
Confidence 56778888743 3677788999999999999988888655544322211 1111 123568899999998
Q ss_pred EEEEc-CceeEecCccc-ccccCCCcchHHHHHHHHHHH-ccCCCCCChHHHHHHHHHHHHHhHHHhhccCC
Q 029908 84 RYYTK-SFKGAVDAFRV-KTVDTTGAGDAFVGALLCKIV-DDQSAIEDEPRLREILKFANACGALSTTKKGA 152 (185)
Q Consensus 84 ~~~~~-~~~~~~~~~~~-~~~d~~GaGDaf~A~~~~~l~-~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~ 152 (185)
-.... ++.+++++.+- +++|+.|+||+|.||++|+++ ++.+ +.+|+.+|+++|+.++...|-
T Consensus 234 ~~l~adg~yfev~a~~ppkvVD~lg~~DtF~A~vIyA~lk~~r~-------l~eAvdfg~rvas~Kl~g~Gf 298 (308)
T KOG2947|consen 234 GALGADGKYFEVDAFKPPKVVDTLGAGDTFNAGVIYALLKQGRS-------LAEAVDFGNRVASKKLGGQGF 298 (308)
T ss_pred cccCCCCCEEecCCCCCccceeeccCCCcchHHHHHHHHHhhhh-------HHHHHHHHHHhhhcccccccc
Confidence 87664 46667887764 799999999999999999976 5666 999999999999999988774
No 75
>PRK09355 hydroxyethylthiazole kinase; Validated
Probab=99.24 E-value=2.3e-10 Score=91.62 Aligned_cols=131 Identities=18% Similarity=0.064 Sum_probs=87.5
Q ss_pred HHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhc--cccEEEcCHHHHhHhhCCCCC--------CH----HHHHHhcC
Q 029908 3 AAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWD--KAEVIKVSDVELEFLTGSDKI--------DD----ESALSLWH 68 (185)
Q Consensus 3 ~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~--~~dii~~n~~E~~~l~~~~~~--------~~----~~~~~l~~ 68 (185)
.+++.++|+++||...... ....+...++++ ++++|+||..|+..|.+.... .. +.++++.+
T Consensus 79 ~a~~~~~pvVlDpv~~~~~----~~~~~~~~~ll~~~~~~vItPN~~E~~~L~g~~~~~~~vd~~~~~~~~~~~a~~la~ 154 (263)
T PRK09355 79 IANEAGKPVVLDPVGVGAT----SYRTEFALELLAEVKPAVIRGNASEIAALAGEAAETKGVDSTDGSADAVEIAKAAAK 154 (263)
T ss_pred HHHhcCCCEEECCcccCcc----hhhHHHHHHHHHhcCCcEecCCHHHHHHHhCCCcccCCcCCCCCHHHHHHHHHHHHH
Confidence 4678899999999764321 112233333443 689999999999999986421 11 11225555
Q ss_pred CCCcEEEEEcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHH
Q 029908 69 PNLKLLLVTLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALS 146 (185)
Q Consensus 69 ~g~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~ 146 (185)
.+...|++|.+. .++++++..+.++.......+.+|+||++.|.+++.+..|.+ +.+++..|...-..+
T Consensus 155 ~~~~~VvvkG~~--d~I~~~~~~~~~~~g~~~~~~v~GtGc~L~~~iaa~lA~g~~-------~~~A~~~A~~~~~~a 223 (263)
T PRK09355 155 KYGTVVVVTGEV--DYITDGERVVSVHNGHPLMTKVTGTGCLLSAVVAAFAAVEKD-------YLEAAAAACAVYGIA 223 (263)
T ss_pred HhCCEEEEECCC--cEEEeCCEEEEEeCCCcccCCcccccHHHHHHHHHHHhcCCC-------HHHHHHHHHHHHHHH
Confidence 555578888543 455555555666533333445599999999999999999998 889988888655544
No 76
>TIGR00694 thiM hydroxyethylthiazole kinase. This model represents the hydoxyethylthiazole kinase, ThiM, of a number of bacteria, and C-terminal domains of bifunctional thiamine biosynthesis proteins of Saccharomyces cerevisiae and Schizosaccharomyces pombe, in which the N-terminal domain corresponds to the bacterial thiamine-phosphate pyrophosphorylase (EC 2.5.1.3), ThiE.
Probab=99.19 E-value=3.9e-10 Score=89.62 Aligned_cols=133 Identities=13% Similarity=-0.005 Sum_probs=86.9
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhc--cccEEEcCHHHHhHhhCCCC------C--CHHH----HHHhc
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWD--KAEVIKVSDVELEFLTGSDK------I--DDES----ALSLW 67 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~--~~dii~~n~~E~~~l~~~~~------~--~~~~----~~~l~ 67 (185)
+.++++++||++||...... ....+...++++ ++++|+||..|++.|.+... . ..++ ++++.
T Consensus 73 ~~~~~~~~pvVlDPV~~~~s----~~r~~~~~~Ll~~~~~~vITpN~~E~~~L~g~~~~~~gvd~~~~~~d~~~~a~~la 148 (249)
T TIGR00694 73 KSANELGVPVVLDPVGVGAT----KFRTETALELLSEGRFAAIRGNAGEIASLAGETGLMKGVDSGEGAADAIRAAQQAA 148 (249)
T ss_pred HHHHhcCCCEEEcccccccc----hhHHHHHHHHHhhcCCceeCCCHHHHHHHhCCCCCCCCcCCccchHHHHHHHHHHH
Confidence 34667799999999764321 112233456676 47999999999999998541 0 1112 22444
Q ss_pred CCCCcEEEEEcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHh
Q 029908 68 HPNLKLLLVTLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALST 147 (185)
Q Consensus 68 ~~g~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~ 147 (185)
+.+...|++|.+ ..+++++++.+.+...+......+|.||++.+++++.+++|.+ +.+|+..|...-....
T Consensus 149 ~~~~~~VllkG~--~D~i~~~~~~~~~~~g~~~~~~~~GtGc~LssaIaa~LA~g~~-------~~~A~~~A~~~~~~a~ 219 (249)
T TIGR00694 149 QKYGTVVVITGE--VDYVSDGTSVYTIHNGTELLGKITGSGCLLGSVVAAFCAVEED-------PLDAAISACLLYKIAG 219 (249)
T ss_pred HHhCCEEEEECC--CcEEEeCCEEEEECCCChHHhCCccchHHHHHHHHHHHhcCCC-------HHHHHHHHHHHHHHHH
Confidence 443337777765 3456666655554443322222479999999999999999998 8999988875444443
No 77
>KOG2598 consensus Phosphomethylpyrimidine kinase [Coenzyme transport and metabolism; Transcription]
Probab=99.05 E-value=5.2e-09 Score=87.03 Aligned_cols=169 Identities=18% Similarity=0.047 Sum_probs=120.0
Q ss_pred CCeEEEcCCCCCCCCCC---hHHHHHHHHHhhccccEEEcCHHHHhHhhCCCC------CCHHHH----HHhcCCCCcEE
Q 029908 8 GALLSYDPNLRLPLWPS---PEEAREQIMSIWDKAEVIKVSDVELEFLTGSDK------IDDESA----LSLWHPNLKLL 74 (185)
Q Consensus 8 g~~v~~D~~~~~~~~~~---~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~------~~~~~~----~~l~~~g~~~v 74 (185)
-.++++||.......++ .+...-..++++|.+|+++||..|+..|.+... .+..++ .++.+.|++.|
T Consensus 119 ~~klVvDPVivatsG~~l~~~divsl~~e~l~P~adiltPNI~Ea~~Ll~~~~~~~~~i~~v~di~~~~~~ihk~gpk~V 198 (523)
T KOG2598|consen 119 IPKLVVDPVIVATSGSSLAGKDIVSLFIEELLPFADILTPNIPEAFILLKKEKREISKIQSVFDIAKDAAKIHKLGPKNV 198 (523)
T ss_pred CcceeecceEEeccCCcccCCccHHHHHHHhhhhHHHhCCChHHHHHHHhhcccCCcccccHHHHHHHHHHHHhcCcceE
Confidence 34699999665444332 456677788999999999999999999987422 222232 36778999999
Q ss_pred EEEcCCCc-----------------eEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHH
Q 029908 75 LVTLGEHG-----------------CRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILK 137 (185)
Q Consensus 75 vit~G~~G-----------------~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~ 137 (185)
+++.|... .+++.+.+++.++.+-.....++|.|.++.++++.-|+.|.+ +.+|++
T Consensus 199 lvkGghiP~~~~~~~s~d~~~~~~~DvlydG~~F~~f~~~~~~t~~tHGtgCtLaSAIASnLA~g~s-------l~qAv~ 271 (523)
T KOG2598|consen 199 LVKGGHIPFNKNMMTSKDDSDKYTVDVLYDGKEFYIFKSPYLATKHTHGTGCTLASAIASNLARGYS-------LLQAVQ 271 (523)
T ss_pred EEeCCCcCccccccccCcccCCceEEEEEecceEEEecccccccccccCccchHHHHHHHHHhhcCC-------HHHHHH
Confidence 99988431 346777888899998889999999999999999999999999 999999
Q ss_pred HHHHHhHHHhhccCCCC---CC-----------CC--HHHHHHHHhcCcchhhhhhhhhhhh
Q 029908 138 FANACGALSTTKKGAIP---AL-----------PT--ESEALALLKRSTIIDKIMSWIFFWF 183 (185)
Q Consensus 138 ~a~~~aa~~~~~~g~~~---~~-----------~~--~~~i~~~~~~~~~~~~~~~~~~~~~ 183 (185)
.|....--+++..-... .. |. -+=++-+...-++.++-.|++|-=|
T Consensus 272 ~ai~yvq~Ai~~s~~i~~~s~~plnh~~al~ivP~k~g~f~~yl~~hpkv~p~W~s~inh~f 333 (523)
T KOG2598|consen 272 GAIEYVQNAIAISCDITKGSVKPLNHVYALEIVPYKPGSFFNYLINHPKVKPKWDSYINHEF 333 (523)
T ss_pred HHHHHHHHHHHhcCCcccCcCCcccchhheeecCCCcHHHHHHHhhCcccChhHHHHhhHHH
Confidence 99865544443322111 00 11 1333444556666677666666544
No 78
>KOG2599 consensus Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme transport and metabolism]
Probab=98.98 E-value=7.2e-09 Score=81.50 Aligned_cols=132 Identities=20% Similarity=0.162 Sum_probs=88.2
Q ss_pred cCCeEEEcCCCCC--CCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHH----HhcCCCCcEEEEEcCC
Q 029908 7 AGALLSYDPNLRL--PLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESAL----SLWHPNLKLLLVTLGE 80 (185)
Q Consensus 7 ~g~~v~~D~~~~~--~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~----~l~~~g~~~vvit~G~ 80 (185)
.+..-++||.+.. .+|.+.+-...+-..+.+.+|+|+||.-|++.|+|....+.++++ .+...|++.||||...
T Consensus 111 p~~~wv~DPVmGDnG~lYV~eelipvYr~~i~~ladiiTPNqFE~EiLtg~~I~t~eda~~a~~~lhq~~v~~vVITS~~ 190 (308)
T KOG2599|consen 111 PNLTWVCDPVMGDNGRLYVPEELIPVYRDLIIPLADIITPNQFEAEILTGMEIRTEEDAKRAVEKLHQKGVKTVVITSFD 190 (308)
T ss_pred CCeEEEeCccccCCccEeccHHHHHHHHHhhcchhhhcCCcchhhhhhcCCeeccHHHHHHHHHHHHHhCCCEEEEEeee
Confidence 3556778996643 566644433434334555699999999999999999998877765 5666899999999854
Q ss_pred C----ceEEEE-----cCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHh
Q 029908 81 H----GCRYYT-----KSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACG 143 (185)
Q Consensus 81 ~----G~~~~~-----~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~a 143 (185)
- |..++. +.+.+.+..|..+. -.+|.||.|+|-+++.+.+..+ .+++..+++.....-
T Consensus 191 ~~~~~g~~l~c~gs~~~~~~f~~~ipki~~-~FtGTGDLfsaLLla~~~~~~~----~~~l~~a~e~~ls~~ 257 (308)
T KOG2599|consen 191 LGEFTGETLRCIGSSCGSERFRYLIPKIDG-VFTGTGDLFSALLLAWLHESPD----NDDLSKAVEQVLSSV 257 (308)
T ss_pred eCCCCCcEEEEEEeccCCceEEEEecccce-EEecccHHHHHHHHHHHhcCCC----cchHHHHHHHHHHHH
Confidence 3 322221 22444444444444 4589999999999988876531 123777777666443
No 79
>PF02110 HK: Hydroxyethylthiazole kinase family; InterPro: IPR000417 Thiamine pyrophosphate (TPP), a required cofactor for many enzymes in the cell, is synthesised de novo in Salmonella typhimurium []. Five kinase activities have been implicated in TPP synthesis, which involves joining a 4-methyl-5-(beta-hydroxyethyl)thiazole (THZ) moiety and a 4-amino-5- hydroxymethyl-2-methylpyrimidine (HMP) moiety [, ]. THZ kinase (2.7.1.50 from EC) activity is involved in the salvage synthesis of TH-P from the thiazole: 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate + 4-4-methyl-5-(2-phosphonooxyethyl)-thiazole = pyrophosphate + thiamin monophosphate Hydroxyethylthiazole kinase expression is regulated at the mRNA level by intracellular thiamin pyrophosphate [].; GO: 0004417 hydroxyethylthiazole kinase activity, 0009228 thiamine biosynthetic process; PDB: 1EKK_A 1ESQ_C 1C3Q_B 1ESJ_A 1EKQ_B 3HPD_A 3DZV_A 3NL5_A 3NL2_A 3NM1_A ....
Probab=98.44 E-value=9.1e-06 Score=64.25 Aligned_cols=128 Identities=20% Similarity=0.111 Sum_probs=82.4
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhh--ccccEEEcCHHHHhHhhCCCCCC---------HH---HHHHhc
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIW--DKAEVIKVSDVELEFLTGSDKID---------DE---SALSLW 67 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l--~~~dii~~n~~E~~~l~~~~~~~---------~~---~~~~l~ 67 (185)
+.|+++|+|++|||..... .+...+...+++ -++++|+.|..|...|.+..... .+ .++++-
T Consensus 73 ~~A~~~~~PvVLDPVgvGa----s~~R~~~~~~LL~~~~~~vIrGN~sEI~aLag~~~~~kGVDs~~~~~~~~~~a~~lA 148 (246)
T PF02110_consen 73 KAANELGIPVVLDPVGVGA----SKFRTEFALELLNNYKPTVIRGNASEIAALAGEDSKAKGVDSGDSDEDAIEAAKQLA 148 (246)
T ss_dssp HHHHHTT--EEEE-TTBTT----BHHHHHHHHHHHCHS--SEEEEEHHHHHHHHTCCCCSCSSSSSCGSHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEeCcccCC----cHHHHHHHHHHHHhCCCcEEEeCHHHHHHHhCcCCCCCCcCcCCcchHHHHHHHHHH
Confidence 5688999999999975331 466677778888 47899999999999999875311 11 112232
Q ss_pred CCCCcEEEEEcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHH
Q 029908 68 HPNLKLLLVTLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANAC 142 (185)
Q Consensus 68 ~~g~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~ 142 (185)
+ ..+.+|+-.|+ -.++.++...+.++--..-.-.-||+|+.+.|.+++.+....+ +..+...|...
T Consensus 149 ~-k~~~vVvvTG~-~D~Isdg~~~~~i~nG~~~l~~itGtGC~lgaliaaf~av~~d-------~~~aa~~a~~~ 214 (246)
T PF02110_consen 149 Q-KYNCVVVVTGE-VDYISDGNRVYRIPNGSPLLSKITGTGCMLGALIAAFLAVAED-------PLEAAVAAVAL 214 (246)
T ss_dssp H-HTTSEEEEESS-SEEEEESSCEEEECSSSGGGGGSTTHHHHHHHHHHHHHCCCSS-------HHHHHHHHHHH
T ss_pred H-hcCCEEEEecC-CcEEECCCeEEEeCCCChHhcceeccchHHHHHHHHHHhcccc-------chHHHHHHHHH
Confidence 2 22345555554 4455667777777666655666799999999988888877666 55555555543
No 80
>KOG3009 consensus Predicted carbohydrate kinase, contains PfkB domain [General function prediction only]
Probab=98.33 E-value=1.7e-06 Score=72.85 Aligned_cols=132 Identities=16% Similarity=0.188 Sum_probs=90.8
Q ss_pred HHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhc-cccEEEcCHHHHhHhhCCCC----CC----H----HHH---HHhc
Q 029908 4 AKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWD-KAEVIKVSDVELEFLTGSDK----ID----D----ESA---LSLW 67 (185)
Q Consensus 4 a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~-~~dii~~n~~E~~~l~~~~~----~~----~----~~~---~~l~ 67 (185)
++++.++|+|.|.. .+.....++-++. .++.+.||..|+-....... ++ . +.+ +..+
T Consensus 446 ak~~k~~V~fEPTd-------~~k~~K~fk~l~v~~i~~i~PN~~Ell~a~k~~~v~~nps~~q~~~~~~~~~~~~~~k~ 518 (614)
T KOG3009|consen 446 AKKHKKQVWFEPTD-------IDKVKKVFKTLLVGAITAISPNANELLKAAKLCHVSVNPSVIQTADGVLELIEKEKTKL 518 (614)
T ss_pred hhhccCceEecCCC-------chhhhhhhhhcceeeEEeeCCCHHHHHHHhhcCceeeChhhhccchHHHHHHHHHHHHh
Confidence 78899999999975 2334444443332 46999999999843222111 00 0 011 1233
Q ss_pred CCCCcEEEEEcCCCceEEEEcCc-----eeEecCccc--ccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHH
Q 029908 68 HPNLKLLLVTLGEHGCRYYTKSF-----KGAVDAFRV--KTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFAN 140 (185)
Q Consensus 68 ~~g~~~vvit~G~~G~~~~~~~~-----~~~~~~~~~--~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~ 140 (185)
.....++|+|...+|+++..++. ....|++.. ++++..|+||+|+++++.+++++.+ +.+++.-+.
T Consensus 519 ~~~~s~~I~tl~~~G~l~~yr~k~g~l~~~s~~p~~~~~n~vsvsgaGdsf~~g~i~~l~~~~~-------v~es~~gg~ 591 (614)
T KOG3009|consen 519 LLNTSIFIVTLANKGSLVVYRNKLGQLEFQSLPPPLQMNNVVSVSGAGDSFNSGVIAGLAHNKT-------VVESLQGGQ 591 (614)
T ss_pred hcccceEEEEeccCceEEEecCCCCCcccccCCCcccccceeEeccCCcccccceeehhhcCcc-------hHhhccccH
Confidence 35677899999999988776552 334455544 7899999999999999999999999 999999996
Q ss_pred HHhHHHhhc
Q 029908 141 ACGALSTTK 149 (185)
Q Consensus 141 ~~aa~~~~~ 149 (185)
.++..-+..
T Consensus 592 ~~~ralls~ 600 (614)
T KOG3009|consen 592 ECARALLST 600 (614)
T ss_pred HHHHHHHhc
Confidence 666555443
No 81
>COG2145 ThiM Hydroxyethylthiazole kinase, sugar kinase family [Coenzyme metabolism]
Probab=98.15 E-value=7.6e-05 Score=58.92 Aligned_cols=118 Identities=15% Similarity=0.083 Sum_probs=76.9
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhcc--ccEEEcCHHHHhHhhCCCCC--------CHHHHH---HhcC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDK--AEVIKVSDVELEFLTGSDKI--------DDESAL---SLWH 68 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~--~dii~~n~~E~~~l~~~~~~--------~~~~~~---~l~~ 68 (185)
+.|++.|.|+++||..... .+...+...++|.+ .++|+.|..|...|.+.... ...+.. +...
T Consensus 79 ~~An~~~~PvvLDPVgvgA----t~~R~~~~~~LL~~~~~~~IrGN~sEI~~Lag~~~~~kGVDa~~~~~~~~~~a~~~A 154 (265)
T COG2145 79 KAANESGKPVVLDPVGVGA----TKFRTKFALELLAEVKPAAIRGNASEIAALAGEAGGGKGVDAGDGAADAIEAAKKAA 154 (265)
T ss_pred HHHHhcCCCEEecCccCCc----hHHHHHHHHHHHHhcCCcEEeccHHHHHHHhcccccccccccccchhhHHHHHHHHH
Confidence 5788999999999975321 34566777777775 59999999999999865421 111221 2223
Q ss_pred CCCcEEEEEcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCC
Q 029908 69 PNLKLLLVTLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQS 124 (185)
Q Consensus 69 ~g~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~ 124 (185)
...+.+++-.|+ =.++.++.+.+.+.-...-.-.-||+|+...|...+.+....+
T Consensus 155 ~~~~~vvvvTG~-vD~Isdg~~~~~i~nG~pll~~ItGtGCllgav~aaF~av~~d 209 (265)
T COG2145 155 QKYGTVVVVTGE-VDYISDGTRVVVIHNGSPLLGKITGTGCLLGAVVAAFLAVEKD 209 (265)
T ss_pred HHhCcEEEEECC-eeEEEcCCeEEEEECCCcHHhhhhccccHHHHHHHHHHhcCCC
Confidence 333355555554 3445556665555444444445689999988888888876665
No 82
>PRK10565 putative carbohydrate kinase; Provisional
Probab=97.98 E-value=8.4e-05 Score=64.88 Aligned_cols=119 Identities=15% Similarity=0.064 Sum_probs=74.4
Q ss_pred HHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHh--hccccEEEcCHHHHhHhhCCCCCCHH-----HHHHhcCCCCcEEE
Q 029908 3 AAKEAGALLSYDPNLRLPLWPSPEEAREQIMSI--WDKAEVIKVSDVELEFLTGSDKIDDE-----SALSLWHPNLKLLL 75 (185)
Q Consensus 3 ~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~--l~~~dii~~n~~E~~~l~~~~~~~~~-----~~~~l~~~g~~~vv 75 (185)
.+++.++|+++|+.. ...+.+. .....+|+||..|++.|++....+.+ .++++.+.....|+
T Consensus 342 ~~~~~~~P~VLDAda-----------L~ll~~~~~~~~~~VLTPh~gE~~rL~~~~~~~v~~~~~~~a~~~a~~~~~~vv 410 (508)
T PRK10565 342 KVENFRKPMLWDADA-----------LNLLAINPDKRHNRVITPHPGEAARLLGCSVAEIESDRLLSARRLVKRYGGVVV 410 (508)
T ss_pred HHHhcCCCEEEEchH-----------HHHHhhCccccCCeEECCCHHHHHHHhCCChhhhhhhHHHHHHHHHHHhCCEEE
Confidence 456678999999963 1111110 11257999999999999985432211 12233333222444
Q ss_pred EEcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHH
Q 029908 76 VTLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANA 141 (185)
Q Consensus 76 it~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~ 141 (185)
+ .|. ..++.+.++...+........-+.|.||++++.+.+.++++.+ +.+|+..|+.
T Consensus 411 l-KG~-~~iI~~~~~~~~~~~~G~~~ma~~GsGDvLaGiIaalla~g~~-------~~~Aa~~a~~ 467 (508)
T PRK10565 411 L-KGA-GTVIAAEPDALAIIDVGNAGMASGGMGDVLSGIIGALLGQKLS-------PYDAACAGCV 467 (508)
T ss_pred E-eCC-CcEEEcCCceEEEECCCCCCCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHH
Confidence 4 453 3455554444444444445556699999999999999999988 8888888873
No 83
>PF01256 Carb_kinase: Carbohydrate kinase; InterPro: IPR000631 This family is related to Hydroxyethylthiazole kinase IPR000417 from INTERPRO and PfkB carbohydrate kinase IPR011611 from INTERPRO implying that it also a carbohydrate kinase. Several uncharacterised proteins have been shown to share regions of similarities, including yeast chromosome XI hypothetical protein YKL151c; Caenorhabditis elegans hypothetical protein R107.2; Escherichia coli hypothetical protein yjeF; Bacillus subtilis hypothetical protein yxkO; Helicobacter pylori hypothetical protein HP1363; Mycobacterium tuberculosis hypothetical protein MtCY77.05c; Mycobacterium leprae hypothetical protein B229_C2_201; Synechocystis sp. (strain PCC 6803) hypothetical protein sll1433; and Methanocaldococcus jannaschii (Methanococcus jannaschii) hypothetical protein MJ1586. These are proteins of about 30 to 40 kDa whose central region is well conserved.; PDB: 3RSG_A 3RT9_A 3RRF_A 3RTB_A 3RRE_A 3RS9_A 3RSS_A 3RRB_A 3RTA_A 3RTD_A ....
Probab=97.71 E-value=0.00065 Score=53.84 Aligned_cols=142 Identities=16% Similarity=0.124 Sum_probs=82.3
Q ss_pred HHHHcCCeEEEcCCCCCCCCCChHHHHHHHHH---hhccccEEEcCHHHHhHhhCCCCC---CH-HHHHHhcCCCCcEEE
Q 029908 3 AAKEAGALLSYDPNLRLPLWPSPEEAREQIMS---IWDKAEVIKVSDVELEFLTGSDKI---DD-ESALSLWHPNLKLLL 75 (185)
Q Consensus 3 ~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~---~l~~~dii~~n~~E~~~l~~~~~~---~~-~~~~~l~~~g~~~vv 75 (185)
...+...|+++|..- ...+.+ ..+...+++|+.-|++.|++.... +. +.++++.+ ..+.+|
T Consensus 89 ~~~~~~~p~VlDADa-----------L~~l~~~~~~~~~~~IlTPH~gE~~rL~~~~~~~~~~~~~~a~~~a~-~~~~~v 156 (242)
T PF01256_consen 89 ELLESDKPLVLDADA-----------LNLLAENPKKRNAPVILTPHPGEFARLLGKSVEIQEDRIEAAREFAK-EYGAVV 156 (242)
T ss_dssp HHHHHCSTEEEECHH-----------HHCHHHCCCCSSSCEEEE-BHHHHHHHHTTTCHHCCSHHHHHHHHHH-HHTSEE
T ss_pred HHHhhcceEEEehHH-----------HHHHHhccccCCCCEEECCCHHHHHHHhCCcccchhhHHHHHHHHHh-hcCcEE
Confidence 344567889999741 122222 345678999999999999988762 11 11222222 122355
Q ss_pred EEcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHH----HhHHHhhccC
Q 029908 76 VTLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANA----CGALSTTKKG 151 (185)
Q Consensus 76 it~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~----~aa~~~~~~g 151 (185)
+-.|..-.+...+++.+..+. .-.-.-+-|.||++++.+..-+.++.+ +.+++..|+. ++-...+..|
T Consensus 157 vLKG~~t~I~~p~~~~~~n~~-gn~~la~gGsGDvLaGii~~llaq~~~-------~~~Aa~~av~lHg~Ag~~~~~~~~ 228 (242)
T PF01256_consen 157 VLKGAVTIIASPGGRVYVNPT-GNPGLATGGSGDVLAGIIAGLLAQGYD-------PFEAACLAVYLHGRAGDLAAEKYG 228 (242)
T ss_dssp EEESTSSEEEEETSEEEEE-----GGGSSTTHHHHHHHHHHHHHHHTSS-------HHHHHHHHHHHHHHHHHHHCTTCS
T ss_pred EEeCCCcEEEecCcceeEeCC-CCCCCCCCCcccHHHHHHHHHHHccCC-------HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 555654443333444444433 345567789999999988888899998 8998888873 3333344444
Q ss_pred CCCCCCCHHHHHHHHh
Q 029908 152 AIPALPTESEALALLK 167 (185)
Q Consensus 152 ~~~~~~~~~~i~~~~~ 167 (185)
. ++ ...+|.+.+.
T Consensus 229 ~--~~-~a~dli~~iP 241 (242)
T PF01256_consen 229 R--GM-LASDLIDNIP 241 (242)
T ss_dssp S--C---HHHHHHHHH
T ss_pred C--cC-cHHHHHHhcC
Confidence 3 33 5566655543
No 84
>COG0063 Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=96.14 E-value=0.22 Score=40.40 Aligned_cols=93 Identities=18% Similarity=0.108 Sum_probs=54.5
Q ss_pred cEEEcCHHHHhHhhCCCCCCH-----HHHHHhcCCCCcEEEEEcCCCceEEEEcCceeEecCcccccccCCCcchHHHHH
Q 029908 40 EVIKVSDVELEFLTGSDKIDD-----ESALSLWHPNLKLLLVTLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGA 114 (185)
Q Consensus 40 dii~~n~~E~~~l~~~~~~~~-----~~~~~l~~~g~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~ 114 (185)
-+++|+.-|++.|++....+. +..+++. ...+.+|+=.|. ..++.+.+....+....-.-.-+-|.||++++-
T Consensus 154 ~VlTPH~gEf~rL~g~~~~~~~~~r~~~a~~~a-~~~~~vvVLKG~-~tvI~~~~g~~~~n~~G~~~ma~GGtGDvLaGi 231 (284)
T COG0063 154 VVLTPHPGEFARLLGTEVDEIEVDRLEAARELA-AKYGAVVVLKGA-VTVIADPDGEVFVNPTGNPGMATGGTGDVLAGI 231 (284)
T ss_pred EEECCCHHHHHHhcCCcccccccchHHHHHHHH-HHcCCEEEEeCC-CCEEEcCCCcEEEcCCCCHHhccCcchHHHHHH
Confidence 788999999999998543321 2222333 333445555554 444454443344433333444567899998877
Q ss_pred HHHHHHccCCCCCChHHHHHHHHHHH
Q 029908 115 LLCKIVDDQSAIEDEPRLREILKFAN 140 (185)
Q Consensus 115 ~~~~l~~g~~~~~~~~~~~~a~~~a~ 140 (185)
+.+-|+++ .. ++.+++..|+
T Consensus 232 i~alLAq~-~~-----~~~~Aa~~g~ 251 (284)
T COG0063 232 IGALLAQG-PA-----DPLEAAAAGA 251 (284)
T ss_pred HHHHHhCC-CC-----CHHHHHHHHH
Confidence 77777777 30 2556665555
No 85
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=95.65 E-value=0.086 Score=42.00 Aligned_cols=114 Identities=17% Similarity=0.208 Sum_probs=66.5
Q ss_pred ChHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCC--C-CHHHHHHhcCCCCcEEEEE
Q 029908 1 MKAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDK--I-DDESALSLWHPNLKLLLVT 77 (185)
Q Consensus 1 l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~--~-~~~~~~~l~~~g~~~vvit 77 (185)
+++++++++|+++|... +|=- .+..+.+..-. ..-+++||.-|+..|.+... . ....+.+|...-....++-
T Consensus 125 ley~~~~dvP~VIDaDG---L~Lv-~q~~e~l~~~~-~~viLTPNvvEFkRLcd~~l~~~d~~~~~~~L~~~l~nv~vvq 199 (306)
T KOG3974|consen 125 LEYLRGKDVPLVIDADG---LWLV-EQLPERLIGGY-PKVILTPNVVEFKRLCDAELDKVDSHSQMQHLAAELMNVTVVQ 199 (306)
T ss_pred HHHHhcCCCcEEEcCCc---eEeh-hhchhhhhccC-ceeeeCCcHHHHHHHHHHhhccccchHHHHHHHHHhcCeEEEE
Confidence 46788999999999853 3431 11122122211 22688999999999987632 1 1222223333234457777
Q ss_pred cCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHH
Q 029908 78 LGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIV 120 (185)
Q Consensus 78 ~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~ 120 (185)
.|..-.++..+.+.+.++. +-....-=|=||.+++.+..-+.
T Consensus 200 KG~~D~ils~~~ev~~~s~-eGs~kRcGGQGDiLaGsla~fl~ 241 (306)
T KOG3974|consen 200 KGESDKILSPDSEVRVCST-EGSLKRCGGQGDILAGSLATFLS 241 (306)
T ss_pred ecCCceeeCCCCeeEEccC-CCCccccCCCcchhhhHHHHHHH
Confidence 7776665555555555444 23333445679999888776553
No 86
>PRK14038 ADP-dependent glucokinase; Provisional
Probab=88.72 E-value=3 Score=36.14 Aligned_cols=115 Identities=20% Similarity=0.243 Sum_probs=72.0
Q ss_pred HHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCC-------------CCHHHH----HHhc
Q 029908 5 KEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDK-------------IDDESA----LSLW 67 (185)
Q Consensus 5 ~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~-------------~~~~~~----~~l~ 67 (185)
++.+++|-+...+.. ....++.+.+++|++|-+-+|++|+..+...-. ....+. .+|+
T Consensus 256 ~~~~i~iH~EfAs~~-----d~~~r~~i~~ilp~vDSlGmNE~ELa~ll~~lg~~~l~~~i~~~~~~~~~~v~e~~~~L~ 330 (453)
T PRK14038 256 NERGIPAHLEFAFTP-----DETVREEILGLLGKFYSVGLNEVELASIMEVMGEKTLAEKLLAKDPVDPIAVTEAMLKLA 330 (453)
T ss_pred CcCCceEEEEeeccc-----hHHHHHHHHhhCccccccccCHHHHHHHHHHhccchhhhhhhhcCccCHHHHHHHHHHHH
Confidence 346788888876432 344555666899999999999999998875111 122222 2444
Q ss_pred C-CCCcEEEEEcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHH
Q 029908 68 H-PNLKLLLVTLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALS 146 (185)
Q Consensus 68 ~-~g~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~ 146 (185)
+ .|.+.+.+.. .+-+++--+. ++.. +.+|+.+|..+|+..
T Consensus 331 ~~~gleri~vHT--~~y~l~i~~~------------------------------~~~~-------~~~aL~f~~~~Aaar 371 (453)
T PRK14038 331 EKTGVKRIHFHT--YGYYLALTKY------------------------------RGEH-------VRDALLFAALAAAAK 371 (453)
T ss_pred HHcCCCEEEEEe--cceeEEEecC------------------------------CHHH-------HHHHHHHHHHHHHHH
Confidence 3 5777766653 3333332111 3444 899999999999888
Q ss_pred hhccCCCCCCCCHHHHHHHHh
Q 029908 147 TTKKGAIPALPTESEALALLK 167 (185)
Q Consensus 147 ~~~~g~~~~~~~~~~i~~~~~ 167 (185)
.. .|.. .++++++.-++
T Consensus 372 A~-~G~i---~~~~d~~~~l~ 388 (453)
T PRK14038 372 AM-LGNI---EKIDDVRKALD 388 (453)
T ss_pred HH-cCCC---CCHHHHHHHhc
Confidence 75 5544 56777776543
No 87
>PRK14039 ADP-dependent glucokinase; Provisional
Probab=86.76 E-value=9.4 Score=33.15 Aligned_cols=68 Identities=19% Similarity=0.187 Sum_probs=46.8
Q ss_pred cCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCC--------CHHH----HHHhcC-CCCcE
Q 029908 7 AGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKI--------DDES----ALSLWH-PNLKL 73 (185)
Q Consensus 7 ~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~--------~~~~----~~~l~~-~g~~~ 73 (185)
.+++|-+...+. ++.+-....+..++|++|-+=+|++|+..+.+.-.. +.++ +.++++ .|.+.
T Consensus 251 ~~i~iH~E~As~----~~~~i~~~v~~~Ilp~VDSlGmNEqELa~l~~~~g~~~~~i~~~~~~~v~ea~~~l~~~~~le~ 326 (453)
T PRK14039 251 EKLRIHAELGHF----ASKEIANSVFLILAGIVDSIGMNEDELAMLANLHGIPAEGILEMNAEAIGEAACQLASESGLQR 326 (453)
T ss_pred CCceEEEEecCc----ccHHHHHHHHHHhhcccccccCCHHHHHHHHHHcccchhhHhhcCHHHHHHHHHHHHHHcCCCE
Confidence 567888887643 346677778888999999999999999988765221 1111 224443 68877
Q ss_pred EEEEc
Q 029908 74 LLVTL 78 (185)
Q Consensus 74 vvit~ 78 (185)
++|..
T Consensus 327 l~vHT 331 (453)
T PRK14039 327 LIIHT 331 (453)
T ss_pred EEEEe
Confidence 77654
No 88
>TIGR02045 P_fruct_ADP ADP-specific phosphofructokinase. Phosphofructokinase is a key enzyme of glycolysis. The phosphate group donor for different subtypes of phosphofructokinase can be ATP, ADP, or pyrophosphate. This family consists of ADP-dependent phosphofructokinases. Members are more similar to ADP-dependent glucokinases (excluded from this family) than to other phosphofructokinases.
Probab=78.50 E-value=44 Score=29.04 Aligned_cols=117 Identities=21% Similarity=0.221 Sum_probs=70.3
Q ss_pred cCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhh---CCCCC--------CHHH----HHHhcC-CC
Q 029908 7 AGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLT---GSDKI--------DDES----ALSLWH-PN 70 (185)
Q Consensus 7 ~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~---~~~~~--------~~~~----~~~l~~-~g 70 (185)
.+++|-|...+. ++.+-....+..++|++|-+=+|++|+..+. |.... ..++ +.++++ .|
T Consensus 249 ~~i~iH~E~As~----~~~~l~~~i~~~ilp~vDSlGMNE~ELa~ll~~lg~~~l~~~i~~~~~i~~vi~a~~~l~~~~~ 324 (446)
T TIGR02045 249 KDLKIHVEFASI----QNREIRKKVVTNIFPHVDSVGMDEAEIANVLSVLGYDELSDRIFRYNRIEDLILGAKILLDELN 324 (446)
T ss_pred CCCeEEEEeccc----ccHHHHHHHHHhhccccccccCCHHHHHHHHHHhcCCchhhhhhccccHHHHHHHHHHHHHHcC
Confidence 678888887643 3456667777789999999999999999877 22211 1111 123333 57
Q ss_pred CcEEEEEcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhcc
Q 029908 71 LKLLLVTLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKK 150 (185)
Q Consensus 71 ~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~ 150 (185)
.+.+.+.. .+-+++-... +. -++.+.+.+|+.+|+.+|+..- ..
T Consensus 325 leri~vHT--~~y~l~i~~~-------------------------------~~--p~~~~~~~~aL~f~~~~Aa~rA-~~ 368 (446)
T TIGR02045 325 LEVVQVHT--IYYIMYITHA-------------------------------DN--PLSEEELRRSLEFSTILAATRA-SL 368 (446)
T ss_pred CCEEEEEe--cceeEEEecc-------------------------------CC--CCCHHHHHHHHHHHHHHHHHHH-hc
Confidence 76666653 2322221110 10 1122338899999998888776 34
Q ss_pred CCCCCCCCHHHHHHHH
Q 029908 151 GAIPALPTESEALALL 166 (185)
Q Consensus 151 g~~~~~~~~~~i~~~~ 166 (185)
|.. .++++++.-+
T Consensus 369 G~i---~~~~d~~~~l 381 (446)
T TIGR02045 369 GNI---ENPDDAEAGL 381 (446)
T ss_pred CCC---CCHHHHHHHh
Confidence 543 4667776553
No 89
>PRK03979 ADP-specific phosphofructokinase; Provisional
Probab=78.15 E-value=42 Score=29.32 Aligned_cols=119 Identities=18% Similarity=0.127 Sum_probs=71.0
Q ss_pred HcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCC---CC--------CHHH----HHHhcC-C
Q 029908 6 EAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSD---KI--------DDES----ALSLWH-P 69 (185)
Q Consensus 6 ~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~---~~--------~~~~----~~~l~~-~ 69 (185)
+.+++|-|...+. ++.+-....+..++|++|-+=+|+.|+..+...- .. ..++ +.++++ .
T Consensus 262 ~~~i~iH~E~As~----~~~~ir~~i~~~ilp~vDSlGmNE~ELa~l~~~lg~~~l~~~i~~~~~i~~v~~a~~~L~~~~ 337 (463)
T PRK03979 262 NKDIKIHVEFASI----QNREIRKKIITYILPHVDSVGMDETEIANILNVLGYEELSERILKESRIEDVIEGAKILLDEL 337 (463)
T ss_pred CCCceEEEEeccc----cCHHHHHHHHHhhccccccccCCHHHHHHHHHHhcCcchhhhhhccccHHHHHHHHHHHHHHc
Confidence 3578888887653 3456667777789999999999999999765321 11 1111 124443 5
Q ss_pred CCcEEEEEcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhc
Q 029908 70 NLKLLLVTLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTK 149 (185)
Q Consensus 70 g~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~ 149 (185)
+.+.+.+.. .+-+++--. . +..++.+...+|+.+|+.+||..-.
T Consensus 338 ~leri~vHT--~~y~l~i~~---------~------------------------~~p~~~~~~~~aL~f~~~~Aa~rA~- 381 (463)
T PRK03979 338 NLERVQVHT--LYYIMYICK---------K------------------------DNPLSEEELRKSLEFATILAATKAK- 381 (463)
T ss_pred CCCEEEEEe--cceeeEEec---------c------------------------CCCCCHHHHHHHHHHHHHHHHHHHH-
Confidence 666665543 222221100 0 0112223489999999988887763
Q ss_pred cCCCCCCCCHHHHHHHHh
Q 029908 150 KGAIPALPTESEALALLK 167 (185)
Q Consensus 150 ~g~~~~~~~~~~i~~~~~ 167 (185)
.|.. .++++++.-++
T Consensus 382 ~G~i---~~~ed~~~~l~ 396 (463)
T PRK03979 382 LGDI---KSIEDLKVGLE 396 (463)
T ss_pred cCCC---CCHHHHHHHhc
Confidence 4543 46777766554
No 90
>PF11469 Ribonucleas_3_2: Ribonuclease III; InterPro: IPR021568 This archaeal family of proteins has no known function. ; PDB: 1ZTD_A.
Probab=65.71 E-value=11 Score=25.93 Aligned_cols=33 Identities=15% Similarity=0.294 Sum_probs=27.0
Q ss_pred ccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHH
Q 029908 102 VDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFAN 140 (185)
Q Consensus 102 ~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~ 140 (185)
.|.+|-||..=|-++++|++|.- +.+++++.=.
T Consensus 53 ~dkh~kGd~aEA~iAyAWLeg~i------t~eEaveil~ 85 (120)
T PF11469_consen 53 TDKHGKGDIAEALIAYAWLEGKI------TIEEAVEILK 85 (120)
T ss_dssp GGCCGHHHHHHHHHHHHHHTTSS-------HHHHHHHHH
T ss_pred ccccCccHHHHHHHHHHHHhccc------cHHHHHHHHH
Confidence 48899999999999999999975 2778776543
No 91
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=63.07 E-value=35 Score=26.41 Aligned_cols=65 Identities=6% Similarity=0.045 Sum_probs=39.4
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEc-----CHHHHhHhhCCCCCCH-HHHHHhcCCCCcEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKV-----SDVELEFLTGSDKIDD-ESALSLWHPNLKLL 74 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~-----n~~E~~~l~~~~~~~~-~~~~~l~~~g~~~v 74 (185)
+.+|+.|+.+.+|-+...+ .+.+.++++++|.+.+ +.+.-..++|...... +.++.+.+.|....
T Consensus 61 ~~~k~~gi~~~leTnG~~~--------~~~~~~l~~~~D~~l~DiK~~d~~~~~~~tG~~~~~il~nl~~l~~~g~~v~ 131 (213)
T PRK10076 61 QRLRLWGVSCAIETAGDAP--------ASKLLPLAKLCDEVLFDLKIMDATQARDVVKMNLPRVLENLRLLVSEGVNVI 131 (213)
T ss_pred HHHHHcCCCEEEECCCCCC--------HHHHHHHHHhcCEEEEeeccCCHHHHHHHHCCCHHHHHHHHHHHHhCCCcEE
Confidence 5788999999999875321 3455667777777655 4555567777553221 22334545555433
No 92
>PF13808 DDE_Tnp_1_assoc: DDE_Tnp_1-associated
Probab=59.51 E-value=48 Score=21.80 Aligned_cols=60 Identities=22% Similarity=0.226 Sum_probs=48.2
Q ss_pred chHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCCHHHHHHHHhcCcchhh
Q 029908 108 GDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPTESEALALLKRSTIIDK 174 (185)
Q Consensus 108 GDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~ 174 (185)
.|.++-++++-++...+ +.+...+|...-..-.+..|...++|+.+.+.+++.....++-
T Consensus 22 ~~iL~i~~~a~l~G~~~-------~~~i~~~~~~~~~~l~~~l~~~~~~PS~~Ti~rvl~~ld~~~l 81 (90)
T PF13808_consen 22 ADILLIALCAVLCGADS-------WREIAEWARAHEEWLRKRLGLPRGVPSHDTIRRVLSRLDPEAL 81 (90)
T ss_pred HHHHHHHHHHHHHcccc-------HHHHHHHHHHhHHHHHHhcCCCCCCCcHHHHHHHHHHCCHHHH
Confidence 56666666666665555 9999999998888888888888899999999999998876443
No 93
>PRK03979 ADP-specific phosphofructokinase; Provisional
Probab=57.50 E-value=7.1 Score=33.96 Aligned_cols=31 Identities=16% Similarity=0.194 Sum_probs=23.1
Q ss_pred eeEecCccc-ccccCCCcchHHHHHHHHHHHc
Q 029908 91 KGAVDAFRV-KTVDTTGAGDAFVGALLCKIVD 121 (185)
Q Consensus 91 ~~~~~~~~~-~~~d~~GaGDaf~A~~~~~l~~ 121 (185)
...+|..-+ +++.|+|-||+|+||...+++.
T Consensus 424 v~~iPt~~v~~P~sTVGLGDtisagaF~~~~~ 455 (463)
T PRK03979 424 IVLIPSRLVENPKSTVGLGDTISAGAFVSYLS 455 (463)
T ss_pred EEEecccccCCCcceeccCcccchhHHHHHHH
Confidence 445565555 6889999999999887776653
No 94
>PF04587 ADP_PFK_GK: ADP-specific Phosphofructokinase/Glucokinase conserved region; InterPro: IPR007666 Although ATP is the most common phosphoryl group donor for kinases, certain hyperthermophilic archaea, such as Thermococcus litoralis and Pyrococcus furiosus, utilise unusual ADP-dependent glucokinases (ADPGKs) and phosphofructokinases (ADPPKKs) in their glycolytic pathways [, , ]. ADPGKs and ADPPFKs exhibit significant similarity, and form an ADP-dependent kinase (ADPK) family, which was tentatively named the PFKC family []. A ~460-residue ADPK domain is also found in a bifunctional ADP-dependent gluco/phosphofructo- kinase (ADP-GK/PFK) from Methanocaldococcus jannaschii (Methanococcus jannaschii) as well as in homologous hypothetical proteins present in several eukaryotes []. The whole structure of the ADPK domain can be divided into large and small alpha/beta subdomains. The larger subdomain, which carries the ADP binding site, consists of a twisted 12-stranded beta sheet flanked on both faces by 13 alpha helices and three 3(10) helices, forming an alpha/beta 3-layer sandwich. The smaller subdomain, which covers the active site, forms an alpha/beta two-layer structure containing 5 beta strands and four alpha helices. The ADP molecule is buried in a shallow pocket in the large subdomain. The binding of substrate sugar induces a structural change, the small domain closing to form a complete substrate sugar binding site [, , ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 1GC5_A 1L2L_A 3DRW_B 1U2X_A 1UA4_A.
Probab=57.39 E-value=23 Score=30.72 Aligned_cols=45 Identities=13% Similarity=0.146 Sum_probs=33.4
Q ss_pred HcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhC
Q 029908 6 EAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTG 54 (185)
Q Consensus 6 ~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~ 54 (185)
..+++|-|....- .+.+-....+..++|++|-+=+|++|+..+..
T Consensus 248 ~~~~~iH~E~As~----~d~~l~~~i~~~ilp~vDSlGmNEqEL~~l~~ 292 (444)
T PF04587_consen 248 NPDIPIHLELASF----ADEELRKEILEKILPHVDSLGMNEQELANLLS 292 (444)
T ss_dssp HTT-EEEEE--------SSHHHHHHHHHHHGGGSSEEEEEHHHHHHHHH
T ss_pred CCCCceEEEeccc----cCHHHHHHHHHHhhccccccccCHHHHHHHHH
Confidence 5789999988643 34566777777999999999999999998753
No 95
>PHA00438 hypothetical protein
Probab=49.10 E-value=15 Score=23.65 Aligned_cols=19 Identities=21% Similarity=0.524 Sum_probs=15.9
Q ss_pred ccCCCcchHHHHHHHHHHH
Q 029908 102 VDTTGAGDAFVGALLCKIV 120 (185)
Q Consensus 102 ~d~~GaGDaf~A~~~~~l~ 120 (185)
....|..++|.|||++++-
T Consensus 44 lR~~G~SE~~IaGfl~Gl~ 62 (81)
T PHA00438 44 LRQAGYSEAFIAGFLAGLQ 62 (81)
T ss_pred HHHcCCcHHHHHHHHHHHH
Confidence 3448999999999999973
No 96
>PF10911 DUF2717: Protein of unknown function (DUF2717); InterPro: IPR020121 The proteins in this entry are uncharacterised.
Probab=45.27 E-value=19 Score=23.19 Aligned_cols=19 Identities=11% Similarity=0.349 Sum_probs=15.9
Q ss_pred ccCCCcchHHHHHHHHHHH
Q 029908 102 VDTTGAGDAFVGALLCKIV 120 (185)
Q Consensus 102 ~d~~GaGDaf~A~~~~~l~ 120 (185)
....|..++|++||+.|+-
T Consensus 44 lr~~G~SE~~I~Gfl~Gl~ 62 (77)
T PF10911_consen 44 LRKQGWSESYILGFLAGLQ 62 (77)
T ss_pred HHHccccHHHHHHHHHHHH
Confidence 3446999999999999974
No 97
>TIGR00444 mazG MazG family protein. This family of prokaryotic proteins has no known function. It includes the uncharacterized protein MazG in E. coli.
Probab=41.02 E-value=1.4e+02 Score=23.80 Aligned_cols=56 Identities=14% Similarity=0.032 Sum_probs=38.7
Q ss_pred cchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHH-----HhHH--HhhccCCCCCCCCHHHHHHHHhcC
Q 029908 107 AGDAFVGALLCKIVDDQSAIEDEPRLREILKFANA-----CGAL--STTKKGAIPALPTESEALALLKRS 169 (185)
Q Consensus 107 aGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~-----~aa~--~~~~~g~~~~~~~~~~i~~~~~~~ 169 (185)
-||.+.+.+..+...|-+ ++.|++.++. .... .+...|....-.+.++++.++++.
T Consensus 185 lGDlLFalvnlAr~~giD-------pE~ALr~a~~KF~~Rf~~~E~~~~~~g~~~~~~slee~~~lW~~a 247 (248)
T TIGR00444 185 MGDLLFATVNLARHLKTD-------AEIALQKANEKFERRFREVERIVAARGLELTGVDLEEMEELWQQV 247 (248)
T ss_pred HHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCCHHHHHHHHHHc
Confidence 599999999999999999 9999998873 2221 233344332334678888877654
No 98
>TIGR02045 P_fruct_ADP ADP-specific phosphofructokinase. Phosphofructokinase is a key enzyme of glycolysis. The phosphate group donor for different subtypes of phosphofructokinase can be ATP, ADP, or pyrophosphate. This family consists of ADP-dependent phosphofructokinases. Members are more similar to ADP-dependent glucokinases (excluded from this family) than to other phosphofructokinases.
Probab=39.20 E-value=20 Score=31.15 Aligned_cols=29 Identities=17% Similarity=0.182 Sum_probs=20.3
Q ss_pred eeEecCccc-ccccCCCcchHHHHHHHHHH
Q 029908 91 KGAVDAFRV-KTVDTTGAGDAFVGALLCKI 119 (185)
Q Consensus 91 ~~~~~~~~~-~~~d~~GaGDaf~A~~~~~l 119 (185)
...+|..-+ +++.|+|-||+|+||-..++
T Consensus 410 v~~vPs~~v~~P~sTVGLGDtissgaF~~~ 439 (446)
T TIGR02045 410 AVLIPSRLVENPKSTVGLGDTISTGAFVSY 439 (446)
T ss_pred EEEechhhcCCCcceeccCcccchhHHHHH
Confidence 445566544 68899999999987644443
No 99
>TIGR00334 5S_RNA_mat_M5 ribonuclease M5. This family of orthologous proteins shows a weak but significant similarity to the central region of the DnaG-type DNA primase. The region of similarity is termed the Toprim (topoisomerase-primase) domain and is also shared by RecR, OLD family nucleases, and type IA and II topoisomerases.
Probab=39.04 E-value=62 Score=24.38 Aligned_cols=55 Identities=18% Similarity=0.218 Sum_probs=40.5
Q ss_pred HHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhH---hhCCCCCCHHHHH
Q 029908 4 AKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEF---LTGSDKIDDESAL 64 (185)
Q Consensus 4 a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~---l~~~~~~~~~~~~ 64 (185)
.+++|+-|..||.+. .+..+..+.+.+|.+-..+++..++.. -.|....+.+++.
T Consensus 45 ~~~rgVIIfTDpD~~------GekIRk~i~~~vp~~khafi~~~~a~~~~~~iGVE~As~e~I~ 102 (174)
T TIGR00334 45 QKKQGVIILTDPDFP------GEKIRKKIEQHLPGYENCFIPKHLAKPNKKKIGVEEASVEAII 102 (174)
T ss_pred hhcCCEEEEeCCCCc------hHHHHHHHHHHCCCCeEEeeeHHhcCcCCCCcccCCCCHHHHH
Confidence 456899999999863 678899999999999999999988753 1233444455554
No 100
>COG3684 LacD Tagatose-1,6-bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=35.87 E-value=66 Score=26.03 Aligned_cols=135 Identities=16% Similarity=0.182 Sum_probs=72.5
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCCh--------HHHHHHHHHhh-ccccEEEcCHHHHhHhhCCCCCCHHHHH---Hhc-C
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSP--------EEAREQIMSIW-DKAEVIKVSDVELEFLTGSDKIDDESAL---SLW-H 68 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~--------~~~~~~~~~~l-~~~dii~~n~~E~~~l~~~~~~~~~~~~---~l~-~ 68 (185)
+.|+..+++.++.|-.++....+. ....+.++.+. +.+|++++-.-- +--| ...+.+. ++- .
T Consensus 154 sec~aedi~f~lE~ltyd~~~~d~~eyak~kp~kV~~a~k~fsd~GadvlKvevPv--yveG---e~~ea~~~f~~~~~~ 228 (306)
T COG3684 154 SECHAEDLPFFLEPLTYDPRIGDKEEYAKRKPQKVIEAMKEFSDSGADVLKVEVPV--YVEG---EQEEAAAAFQRQNDH 228 (306)
T ss_pred HHhhhcCCceeEeeeecCCCCCChHHHHhhchHHHHHHHHHhccCCCceEEeecce--eccC---ccHHHHHHHHHhhcC
Confidence 467889999999885544332222 11122222222 367888763321 1111 1222222 221 1
Q ss_pred CCCcEEEEEcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhh
Q 029908 69 PNLKLLLVTLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTT 148 (185)
Q Consensus 69 ~g~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~ 148 (185)
...++++++.|..--++- ..+.+....|| +|++++.+. +..++..|-.++-..+.
T Consensus 229 ~~lP~i~LSAGV~~klF~----------~tv~fA~eaGA-----sGvL~GRAt----------Wa~~v~~g~d~~re~Lr 283 (306)
T COG3684 229 INLPWIYLSAGVSAKLFQ----------RTVRFAMEAGA-----SGVLAGRAT----------WAGVVEQGEDAAREWLR 283 (306)
T ss_pred CCCCeEEEecCccHHHhH----------HHHHHHHHcCC-----ceeEechhh----------hhcccccCcHHHHHHHH
Confidence 478899999885332211 12345555676 555555443 55666666666666666
Q ss_pred ccCCCCCCCCHHHHHHHHhcCc
Q 029908 149 KKGAIPALPTESEALALLKRST 170 (185)
Q Consensus 149 ~~g~~~~~~~~~~i~~~~~~~~ 170 (185)
..| .|..+++.+.+.+..
T Consensus 284 t~g----~~ni~eL~~vlde~a 301 (306)
T COG3684 284 TVG----FPNLDELNKVLDETA 301 (306)
T ss_pred hhc----cccHHHHHHHHHHhh
Confidence 554 578899998886543
No 101
>PRK14039 ADP-dependent glucokinase; Provisional
Probab=34.81 E-value=26 Score=30.47 Aligned_cols=28 Identities=18% Similarity=0.392 Sum_probs=20.1
Q ss_pred EecCccc-ccccCCCcchHHHHHHHHHHH
Q 029908 93 AVDAFRV-KTVDTTGAGDAFVGALLCKIV 120 (185)
Q Consensus 93 ~~~~~~~-~~~d~~GaGDaf~A~~~~~l~ 120 (185)
.+|..-+ +++.|+|-||+++||-..+++
T Consensus 419 ~iPt~~v~~P~sTVGlGDtisa~af~~~l 447 (453)
T PRK14039 419 ILPTLVSKSPVTTVGLGDTLTAGTFLRLL 447 (453)
T ss_pred EechhhccCCccccccCccccHHHHHHHH
Confidence 4455434 789999999999887555544
No 102
>PF13986 DUF4224: Domain of unknown function (DUF4224)
Probab=33.73 E-value=58 Score=18.76 Aligned_cols=35 Identities=20% Similarity=0.197 Sum_probs=23.3
Q ss_pred EcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEc
Q 029908 43 KVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTL 78 (185)
Q Consensus 43 ~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~ 78 (185)
+++.+|+..|+|..... ...+.|...|+..++-..
T Consensus 2 fLT~~El~elTG~k~~~-~Q~~~L~~~Gi~~~~~~~ 36 (47)
T PF13986_consen 2 FLTDEELQELTGYKRPS-KQIRWLRRNGIPFVVRAD 36 (47)
T ss_pred CCCHHHHHHHHCCCCHH-HHHHHHHHCCCeeEECCC
Confidence 57889999999987653 233455567776655443
No 103
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=33.11 E-value=1.1e+02 Score=27.60 Aligned_cols=44 Identities=23% Similarity=0.240 Sum_probs=30.4
Q ss_pred CCCcEEEEEcCCCceEEEEcC-ceeEecCcccccccCCCcchHHHH
Q 029908 69 PNLKLLLVTLGEHGCRYYTKS-FKGAVDAFRVKTVDTTGAGDAFVG 113 (185)
Q Consensus 69 ~g~~~vvit~G~~G~~~~~~~-~~~~~~~~~~~~~d~~GaGDaf~A 113 (185)
.+....||..|..|+.++.-. +.+.+- ..-..+.+.|+|-+|--
T Consensus 182 ~~~gs~IIrege~Gs~~yV~aeG~~~V~-~~g~ll~~m~~gtvFGE 226 (732)
T KOG0614|consen 182 YRAGSWIIREGEPGSHLYVSAEGELQVS-REGKLLGKMGAGTVFGE 226 (732)
T ss_pred ccCCcEEEecCCCCceEEEeecceEEEe-eCCeeeeccCCchhhhH
Confidence 456679999999998877532 333222 22357899999999864
No 104
>PF04587 ADP_PFK_GK: ADP-specific Phosphofructokinase/Glucokinase conserved region; InterPro: IPR007666 Although ATP is the most common phosphoryl group donor for kinases, certain hyperthermophilic archaea, such as Thermococcus litoralis and Pyrococcus furiosus, utilise unusual ADP-dependent glucokinases (ADPGKs) and phosphofructokinases (ADPPKKs) in their glycolytic pathways [, , ]. ADPGKs and ADPPFKs exhibit significant similarity, and form an ADP-dependent kinase (ADPK) family, which was tentatively named the PFKC family []. A ~460-residue ADPK domain is also found in a bifunctional ADP-dependent gluco/phosphofructo- kinase (ADP-GK/PFK) from Methanocaldococcus jannaschii (Methanococcus jannaschii) as well as in homologous hypothetical proteins present in several eukaryotes []. The whole structure of the ADPK domain can be divided into large and small alpha/beta subdomains. The larger subdomain, which carries the ADP binding site, consists of a twisted 12-stranded beta sheet flanked on both faces by 13 alpha helices and three 3(10) helices, forming an alpha/beta 3-layer sandwich. The smaller subdomain, which covers the active site, forms an alpha/beta two-layer structure containing 5 beta strands and four alpha helices. The ADP molecule is buried in a shallow pocket in the large subdomain. The binding of substrate sugar induces a structural change, the small domain closing to form a complete substrate sugar binding site [, , ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 1GC5_A 1L2L_A 3DRW_B 1U2X_A 1UA4_A.
Probab=32.65 E-value=40 Score=29.25 Aligned_cols=19 Identities=26% Similarity=0.324 Sum_probs=13.1
Q ss_pred ccccCCCcchHHHHHHHHH
Q 029908 100 KTVDTTGAGDAFVGALLCK 118 (185)
Q Consensus 100 ~~~d~~GaGDaf~A~~~~~ 118 (185)
+++.|+|.||++.|+=+.+
T Consensus 424 ~P~~TVGlGD~ISa~~f~~ 442 (444)
T PF04587_consen 424 KPKSTVGLGDTISAGGFVY 442 (444)
T ss_dssp S-S--TTHHHHHHHHHHHH
T ss_pred CCcccccCcchhhhhhHHh
Confidence 6889999999999876554
No 105
>PF11167 DUF2953: Protein of unknown function (DUF2953); InterPro: IPR021338 This family of proteins has no known function.
Probab=32.55 E-value=33 Score=20.06 Aligned_cols=19 Identities=32% Similarity=0.344 Sum_probs=16.1
Q ss_pred CCCcchHHHHHHHHHHHcc
Q 029908 104 TTGAGDAFVGALLCKIVDD 122 (185)
Q Consensus 104 ~~GaGDaf~A~~~~~l~~g 122 (185)
..|.||+...|++++++..
T Consensus 2 ~~G~~Daa~Tgi~~G~l~~ 20 (53)
T PF11167_consen 2 TIGLGDAADTGILYGLLWA 20 (53)
T ss_pred eeeccCHHHHHHHHHHHHH
Confidence 3689999999999998764
No 106
>TIGR03128 RuMP_HxlA 3-hexulose-6-phosphate synthase. at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin. In these species, the enzyme is viewed as a lyase rather than a synthase and is called D-arabino 3-hexulose 6-phosphate formaldehyde lyase. Note that there is some overlap in specificity with the Escherichia coli enzyme 3-keto-L-gulonate 6-phosphate decarboxylase.
Probab=32.11 E-value=1.9e+02 Score=21.62 Aligned_cols=36 Identities=28% Similarity=0.297 Sum_probs=22.1
Q ss_pred hHHHHcCCeEEEcC-CCCCCCCCChHHHHHHHHHhhc-cccEEEcC
Q 029908 2 KAAKEAGALLSYDP-NLRLPLWPSPEEAREQIMSIWD-KAEVIKVS 45 (185)
Q Consensus 2 ~~a~~~g~~v~~D~-~~~~~~~~~~~~~~~~~~~~l~-~~dii~~n 45 (185)
+.++++|+++.++. ++.. ..+....+.+ .+|++.++
T Consensus 96 ~~~~~~g~~~~~~~~~~~t--------~~~~~~~~~~~g~d~v~~~ 133 (206)
T TIGR03128 96 KAAKKHGKEVQVDLINVKD--------KVKRAKELKELGADYIGVH 133 (206)
T ss_pred HHHHHcCCEEEEEecCCCC--------hHHHHHHHHHcCCCEEEEc
Confidence 57889999999873 4311 1222233333 78999875
No 107
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=31.94 E-value=1e+02 Score=22.35 Aligned_cols=40 Identities=15% Similarity=0.112 Sum_probs=28.8
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHh
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELE 50 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~ 50 (185)
+.++++|.++.++.++.. .+...+++++.|+++....+.+
T Consensus 82 ~~lk~~Gl~i~l~Tg~~~---------~~~~~~il~~iD~l~~g~y~~~ 121 (147)
T TIGR02826 82 KIFKEKGLKTCLYTGLEP---------KDIPLELVQHLDYLKTGRWIHT 121 (147)
T ss_pred HHHHHCCCCEEEECCCCC---------HHHHHHHHHhCCEEEEChHHHH
Confidence 567889999999976421 2245677889999998886433
No 108
>PRK09562 mazG nucleoside triphosphate pyrophosphohydrolase; Reviewed
Probab=31.14 E-value=2.2e+02 Score=22.89 Aligned_cols=60 Identities=17% Similarity=-0.005 Sum_probs=40.3
Q ss_pred CcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHH-------hhccCCCCCCCCHHHHHHHHhcCcch
Q 029908 106 GAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALS-------TTKKGAIPALPTESEALALLKRSTII 172 (185)
Q Consensus 106 GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~-------~~~~g~~~~~~~~~~i~~~~~~~~~~ 172 (185)
-.||.+.+.+..+...|.+ ++++++.++.=-... +...|....--+.+++.+.+++.+..
T Consensus 193 ElGDlLf~lv~lAr~~~id-------~E~aL~~a~~Kf~rR~~~vE~~~~~~g~~~~~~s~ee~~~~W~~aK~~ 259 (262)
T PRK09562 193 EFGDLLFALVNLARHLGID-------PEAALRKANAKFERRFRAVEQLAAAQGKTLEDASLEEMDALWQEAKRQ 259 (262)
T ss_pred HHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHHh
Confidence 4599999999999999998 999998887322111 11223221223778888888876644
No 109
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=28.65 E-value=1.2e+02 Score=20.55 Aligned_cols=35 Identities=6% Similarity=-0.120 Sum_probs=21.8
Q ss_pred HHhcCCCCcEEEEEcCCCceEEEEcCceeEecCcc
Q 029908 64 LSLWHPNLKLLLVTLGEHGCRYYTKSFKGAVDAFR 98 (185)
Q Consensus 64 ~~l~~~g~~~vvit~G~~G~~~~~~~~~~~~~~~~ 98 (185)
+...+.|++.+.+|....+-+....+....++..+
T Consensus 68 ~~a~~~g~~vi~iT~~~~s~la~~ad~~l~~~~~~ 102 (128)
T cd05014 68 PHLKRRGAPIIAITGNPNSTLAKLSDVVLDLPVEE 102 (128)
T ss_pred HHHHHCCCeEEEEeCCCCCchhhhCCEEEECCCCc
Confidence 35556899999999976555444344444444433
No 110
>PRK12399 tagatose 1,6-diphosphate aldolase; Reviewed
Probab=28.27 E-value=1.9e+02 Score=24.08 Aligned_cols=140 Identities=14% Similarity=0.097 Sum_probs=67.5
Q ss_pred hHHHHcCCeEEEcCCCCCCCCC-C---------hHHHHHHHHHhhc---cccEEEc----CHHHHhHhhC-CCCCCHHHH
Q 029908 2 KAAKEAGALLSYDPNLRLPLWP-S---------PEEAREQIMSIWD---KAEVIKV----SDVELEFLTG-SDKIDDESA 63 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~-~---------~~~~~~~~~~~l~---~~dii~~----n~~E~~~l~~-~~~~~~~~~ 63 (185)
+.|+..++|.++.|-.++.... . +....+.++++-. .+|++++ |..-.+-+.. ...-+.+++
T Consensus 149 ~eC~a~dipf~lE~ltY~~~~~d~~~~~yak~kP~~V~~a~kefs~~~~gvDVlKvEvPvn~~~veG~~~~e~~yt~~eA 228 (324)
T PRK12399 149 SECVAEDIPFFLEILTYDEKIADNGSVEYAKVKPHKVNEAMKVFSKPRFGVDVLKVEVPVNMKYVEGFAEGEVVYTKEEA 228 (324)
T ss_pred HHHHHCCCCeEEEEeeccCcccccccHHHHhhChHHHHHHHHHhccCCCCCcEEEEecccccccccccCcccccccHHHH
Confidence 4588999999998855442111 1 2233344555433 6899997 2111111100 000011222
Q ss_pred H----Hhc-CCCCcEEEEEcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHH-
Q 029908 64 L----SLW-HPNLKLLLVTLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILK- 137 (185)
Q Consensus 64 ~----~l~-~~g~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~- 137 (185)
. ++- ..+.+.|+++.|..-..+. ..+...-..||+ | +||+++.+- +.+++.
T Consensus 229 ~~~f~~~~~~~~~P~i~LSaGV~~~~F~----------~~l~~A~~aGa~--f-sGvL~GRAt----------W~~~v~~ 285 (324)
T PRK12399 229 AQHFKEQDAATHLPYIYLSAGVSAELFQ----------ETLVFAHEAGAK--F-NGVLCGRAT----------WAGSVKV 285 (324)
T ss_pred HHHHHHHhhccCCCEEEEcCCCCHHHHH----------HHHHHHHHcCCC--c-ceEEeehhh----------hHhhhhh
Confidence 1 111 2578899999885221110 011222233442 2 234444332 555554
Q ss_pred ---HHHHHhHHHhhccCCCCCCCCHHHHHHHHhc
Q 029908 138 ---FANACGALSTTKKGAIPALPTESEALALLKR 168 (185)
Q Consensus 138 ---~a~~~aa~~~~~~g~~~~~~~~~~i~~~~~~ 168 (185)
.+-.++..-+...|. ...++|++.+.+
T Consensus 286 ~~~~g~~~~~ewL~t~g~----~ni~~Ln~vl~~ 315 (324)
T PRK12399 286 YIEQGEAAAREWLRTEGF----ENIDELNKVLDK 315 (324)
T ss_pred hhcCCHHHHHHHHHHHhH----HHHHHHHHHHHh
Confidence 455666666666653 356777777754
No 111
>PRK13575 3-dehydroquinate dehydratase; Provisional
Probab=26.96 E-value=2.8e+02 Score=21.81 Aligned_cols=74 Identities=9% Similarity=0.080 Sum_probs=40.2
Q ss_pred HHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhcc-ccEEEcC-----HHHHhHhhCCCCCCHHHHHHhcC-CCCcEEE
Q 029908 3 AAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDK-AEVIKVS-----DVELEFLTGSDKIDDESALSLWH-PNLKLLL 75 (185)
Q Consensus 3 ~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~-~dii~~n-----~~E~~~l~~~~~~~~~~~~~l~~-~g~~~vv 75 (185)
.+++.|.+|++--.. ..-.++.+...+.+.++... +|++++- ..+...|.. ...+..+ ...+.+.
T Consensus 120 ~~~~~~~~vI~S~H~-F~~TP~~~~l~~~~~~m~~~gaDi~KiAv~~~~~~Dvl~Ll~-------~~~~~~~~~~~p~i~ 191 (238)
T PRK13575 120 HLQQYNKEVVISHHN-FESTPPLDELKFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQ-------AMSTFSDTMDCKVVG 191 (238)
T ss_pred HHHHcCCEEEEecCC-CCCCCCHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHHH-------HHHHHHhccCCCEEE
Confidence 456788898885421 11122345666666666554 7888861 222222210 0111111 3567899
Q ss_pred EEcCCCceE
Q 029908 76 VTLGEHGCR 84 (185)
Q Consensus 76 it~G~~G~~ 84 (185)
+.+|..|..
T Consensus 192 i~MG~~G~i 200 (238)
T PRK13575 192 ISMSKLGLI 200 (238)
T ss_pred EeCCCCCch
Confidence 999998853
No 112
>cd00086 homeodomain Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
Probab=26.23 E-value=83 Score=18.07 Aligned_cols=26 Identities=23% Similarity=0.517 Sum_probs=19.0
Q ss_pred CCCCHHHHHHHHhcCcchhhhhhhhhhhh
Q 029908 155 ALPTESEALALLKRSTIIDKIMSWIFFWF 183 (185)
Q Consensus 155 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 183 (185)
..|+.++++.+..+..+.++ =+.-||
T Consensus 23 ~~P~~~~~~~la~~~~l~~~---qV~~WF 48 (59)
T cd00086 23 PYPSREEREELAKELGLTER---QVKIWF 48 (59)
T ss_pred CCCCHHHHHHHHHHHCcCHH---HHHHHH
Confidence 46899999999888776444 566666
No 113
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=25.67 E-value=38 Score=27.49 Aligned_cols=15 Identities=33% Similarity=0.388 Sum_probs=11.1
Q ss_pred hHHHHcCCeEEEcCC
Q 029908 2 KAAKEAGALLSYDPN 16 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~ 16 (185)
+.|+++|+++.+|-.
T Consensus 152 ~~a~~~gl~lhmDGA 166 (290)
T PF01212_consen 152 ELAREHGLPLHMDGA 166 (290)
T ss_dssp HHHHHHT-EEEEEET
T ss_pred HHHHhCceEEEEehh
Confidence 468888999999864
No 114
>COG1180 PflA Pyruvate-formate lyase-activating enzyme [Posttranslational modification, protein turnover, chaperones]
Probab=24.74 E-value=1.1e+02 Score=24.46 Aligned_cols=64 Identities=27% Similarity=0.257 Sum_probs=38.4
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCH----HH-HhHhhCCCCCCH-HHHHHhcCCCCcE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSD----VE-LEFLTGSDKIDD-ESALSLWHPNLKL 73 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~----~E-~~~l~~~~~~~~-~~~~~l~~~g~~~ 73 (185)
+.||+.|+++.+|-+...+ .+.+.++++..|.+.++. ++ -..+++...... +.+..+.+.|+..
T Consensus 106 ~~ake~Gl~~~l~TnG~~~--------~~~~~~l~~~~D~v~~DlK~~~~~~y~~~tg~~~~~vl~~~~~l~~~g~~v 175 (260)
T COG1180 106 RAAKERGLHVALDTNGFLP--------PEALEELLPLLDAVLLDLKAFDDELYRKLTGADNEPVLENLELLADLGVHV 175 (260)
T ss_pred HHHHHCCCcEEEEcCCCCC--------HHHHHHHHhhcCeEEEeeccCChHHHHHHhCCCcHHHHHHHHHHHcCCCeE
Confidence 6789999999999985332 333456667777766543 33 666666655221 2233455555544
No 115
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=24.74 E-value=57 Score=22.91 Aligned_cols=43 Identities=21% Similarity=0.278 Sum_probs=28.5
Q ss_pred cccEEEcCHHHHhHhhCCCCCCH-HHHHHhcCCCCcEEEEEcCC
Q 029908 38 KAEVIKVSDVELEFLTGSDKIDD-ESALSLWHPNLKLLLVTLGE 80 (185)
Q Consensus 38 ~~dii~~n~~E~~~l~~~~~~~~-~~~~~l~~~g~~~vvit~G~ 80 (185)
.-.+.+....|..+|...+.... +.+.++...+++++|+|.|-
T Consensus 48 ~~RIQiiG~~E~~yl~~l~~~~r~~~l~~l~~~~~P~iIvt~~~ 91 (127)
T PF02603_consen 48 PNRIQIIGNTESAYLNSLDEEERKERLEKLFSYNPPCIIVTRGL 91 (127)
T ss_dssp TCSEEEE-HHHHHHHCCS-HHHHCCHHHHHCTTT-S-EEEETTT
T ss_pred CCeEEEEcHHHHHHHHHCCHHHHHHHHHHHhCCCCCEEEEECcC
Confidence 33678888999999976654322 22347888999999999986
No 116
>smart00642 Aamy Alpha-amylase domain.
Probab=24.63 E-value=47 Score=24.54 Aligned_cols=19 Identities=21% Similarity=0.221 Sum_probs=15.5
Q ss_pred ChHHHHcCCeEEEcCCCCC
Q 029908 1 MKAAKEAGALLSYDPNLRL 19 (185)
Q Consensus 1 l~~a~~~g~~v~~D~~~~~ 19 (185)
++.|+++|++|++|...-.
T Consensus 76 v~~~h~~Gi~vilD~V~NH 94 (166)
T smart00642 76 VDAAHARGIKVILDVVINH 94 (166)
T ss_pred HHHHHHCCCEEEEEECCCC
Confidence 3679999999999997543
No 117
>PF05920 Homeobox_KN: Homeobox KN domain; InterPro: IPR008422 This entry represents a homeobox transcription factor KN domain conserved from fungi to human and plants [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3K2A_B 2LK2_A 1X2N_A 2DMN_A.
Probab=24.53 E-value=68 Score=17.74 Aligned_cols=28 Identities=29% Similarity=0.499 Sum_probs=16.7
Q ss_pred CCCCCHHHHHHHHhcCcchhhhhhhhhhhhc
Q 029908 154 PALPTESEALALLKRSTIIDKIMSWIFFWFV 184 (185)
Q Consensus 154 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 184 (185)
+..|+.+|.+.++.+.....+ =++-||+
T Consensus 8 nPYPs~~ek~~L~~~tgls~~---Qi~~WF~ 35 (40)
T PF05920_consen 8 NPYPSKEEKEELAKQTGLSRK---QISNWFI 35 (40)
T ss_dssp SGS--HHHHHHHHHHHTS-HH---HHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCHH---HHHHHHH
Confidence 356899999988887665433 4555663
No 118
>PF02515 CoA_transf_3: CoA-transferase family III; InterPro: IPR003673 CoA-transferases are found in organisms from all kingdoms of life. They catalyse reversible transfer reactions of coenzyme A groups from CoA-thioesters to free acids. There are at least three families of CoA-transferases, which differ in sequence and reaction mechanism: Family I consists of CoA-transferases for 3-oxoacids (2.8.3.5 from EC, 2.8.3.6 from EC), short-chain fatty acids (2.8.3.8 from EC, 2.8.3.9 from EC) and glutaconate (2.8.3.12 from EC). Most use succinyl-CoA or acetyl-CoA as CoA donors. Family II consists of the homodimeric alpha-subunits of citrate lyase and citramalate lyase (2.8.3.10 from EC, 2.8.3.11 from EC). These enzymes catalyse the transfer of acyl carrier protein (ACP) with a covalently bound CoA derivative, but can accept free CoA thioesters as well. Family III consists of formyl-CoA:oxalate CoA-transferase [], succinyl-CoA:(R)-benzylsuccinate CoA-transferase [], (E)-cinnamoyl-CoA:(R)-phenyllactate CoA-transferase [], and butyrobetainyl-CoA:(R)-carnitine CoA-transferase []. These CoA-transferases occur in prokaryotes and eukaryotes, and catalyse CoA-transfer reactions in a highly substrate- and stereo-specific manner []. This entry represents family III CoA-transferases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1PT7_B 1PT8_A 1PQY_A 1Q7E_A 1Q6Y_A 1PT5_A 1XK6_B 1XK7_C 1XVT_A 1XVU_A ....
Probab=24.30 E-value=83 Score=23.63 Aligned_cols=54 Identities=26% Similarity=0.319 Sum_probs=33.3
Q ss_pred EEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHH--HHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcC
Q 029908 11 LSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDV--ELEFLTGSDKIDDESALSLWHPNLKLLLVTLG 79 (185)
Q Consensus 11 v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~--E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G 79 (185)
|.+|+. .++-++.+.+++..+|+++-|.. .++.+ |... + .+.+.+++.|.++..
T Consensus 1 V~lDl~--------~~~gr~~l~~L~~~ADV~i~n~rpg~~~~l-Gl~~---~---~l~~~nP~LV~~~is 56 (191)
T PF02515_consen 1 VALDLK--------SPEGRAALRRLLATADVVIENFRPGVLERL-GLDY---E---ALRAINPRLVYCSIS 56 (191)
T ss_dssp EEEETT--------SHHHHHHHHHHHHT-SEEEEESSTTHHHHT-T-SH---H---HHHHH-TT-EEEEEE
T ss_pred CEeeCc--------CHHHHHHHHHHHHhCCEEEECCchhhhHhc-CCCH---H---HHHhhCCCCeEEEEE
Confidence 567776 46778999999999999998876 33333 2222 2 333456777777753
No 119
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=23.62 E-value=4.9e+02 Score=23.15 Aligned_cols=66 Identities=17% Similarity=0.186 Sum_probs=37.4
Q ss_pred HHHcCCeEEE---cCCCCCCCCCChHHHHHHHHHhhcc-ccEEEcC-----HHHHhHhhCCCCCCHHHHHHhcCCCCcEE
Q 029908 4 AKEAGALLSY---DPNLRLPLWPSPEEAREQIMSIWDK-AEVIKVS-----DVELEFLTGSDKIDDESALSLWHPNLKLL 74 (185)
Q Consensus 4 a~~~g~~v~~---D~~~~~~~~~~~~~~~~~~~~~l~~-~dii~~n-----~~E~~~l~~~~~~~~~~~~~l~~~g~~~v 74 (185)
++..++++++ |+...+ +.+++.+.+.++... +|++++- ..|...+. ........+.+
T Consensus 131 ~~~~~~~vI~S~H~f~~tP----~~~el~~~~~~~~~~gaDi~Kia~~~~~~~D~~~ll----------~~~~~~~~p~i 196 (529)
T PLN02520 131 KKPEKCKVIVSSHNYENTP----SVEELGNLVARIQATGADIVKIATTALDITDVARMF----------QITVHSQVPTI 196 (529)
T ss_pred hhhcCCEEEEEecCCCCCC----CHHHHHHHHHHHHHhCCCEEEEecCCCCHHHHHHHH----------HHHhhcCCCEE
Confidence 4456888888 443322 345666666665553 7888862 22222221 01112356778
Q ss_pred EEEcCCCce
Q 029908 75 LVTLGEHGC 83 (185)
Q Consensus 75 vit~G~~G~ 83 (185)
.+.+|..|.
T Consensus 197 ~~~MG~~G~ 205 (529)
T PLN02520 197 GLVMGERGL 205 (529)
T ss_pred EEecCCCCc
Confidence 889998883
No 120
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=23.22 E-value=78 Score=27.05 Aligned_cols=44 Identities=18% Similarity=0.130 Sum_probs=28.9
Q ss_pred hHHHHcCCeEEEcCCC----------CCCCCCChHHHHHHHHHhhccccEEEcCH
Q 029908 2 KAAKEAGALLSYDPNL----------RLPLWPSPEEAREQIMSIWDKAEVIKVSD 46 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~----------~~~~~~~~~~~~~~~~~~l~~~dii~~n~ 46 (185)
+.|++.++|+++|..- +.+-|. +....++..+.++++|-+.++-
T Consensus 213 ~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYr-d~sI~~IarEm~sYaD~~~mS~ 266 (471)
T COG3033 213 EIAKKYDIPVVMDAARFAENAYFIKQREPGYR-DWSIEEIAREMYSYADGCTMSA 266 (471)
T ss_pred HHHHHcCCcEEeehhhhhhhhhhhhhcCcccc-cccHHHHHHHHHhhhhhheeec
Confidence 5789999999999721 111111 2235677788888998666554
No 121
>COG2200 Rtn c-di-GMP phosphodiesterase class I (EAL domain) [Signal transduction mechanisms]
Probab=22.99 E-value=3.8e+02 Score=21.09 Aligned_cols=47 Identities=11% Similarity=0.204 Sum_probs=31.9
Q ss_pred hHHHHcCCeEEEcC-CCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCC
Q 029908 2 KAAKEAGALLSYDP-NLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDK 57 (185)
Q Consensus 2 ~~a~~~g~~v~~D~-~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~ 57 (185)
+..++.|+++.+|= +. .......+.++ .+|+|+++..-...+.....
T Consensus 143 ~~L~~~G~~ialDDFGt-------G~ssl~~L~~l--~~d~iKID~~fi~~i~~~~~ 190 (256)
T COG2200 143 RQLRELGVRIALDDFGT-------GYSSLSYLKRL--PPDILKIDRSFVRDLETDAR 190 (256)
T ss_pred HHHHHCCCeEEEECCCC-------CHHHHHHHhhC--CCCeEEECHHHHhhcccCcc
Confidence 46688999999984 21 22233444442 78999999998888765444
No 122
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=22.73 E-value=1e+02 Score=26.97 Aligned_cols=44 Identities=11% Similarity=0.228 Sum_probs=29.8
Q ss_pred hHHHHcCCeEEEcCCCCCC-C---------CCChHHHHHHHHHhhccccEEEcCH
Q 029908 2 KAAKEAGALLSYDPNLRLP-L---------WPSPEEAREQIMSIWDKAEVIKVSD 46 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~-~---------~~~~~~~~~~~~~~l~~~dii~~n~ 46 (185)
+.|+++|++|++|..-... . +. .....+++.+++.++|.++++.
T Consensus 205 elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~-~~~i~ei~~e~~s~aD~~t~S~ 258 (460)
T PRK13237 205 ELCDKHGIKVFFDATRCVENAYFIKEREEGYQ-DKSIKEIVHEMFSYADGCTMSG 258 (460)
T ss_pred HHHHHcCCEEEEECcchhcChhhhcccccccC-CCcHhHHhhhccCcCcEEEEeC
Confidence 5689999999999843211 1 11 2345677788888888777763
No 123
>cd05805 MPG1_transferase GTP-mannose-1-phosphate guanyltransferase (MPG1 transferase), also known as GDP-mannose pyrophosphorylase, is a bifunctional enzyme with both phosphomannose isomerase (PMI) activity and GDP-mannose phosphorylase (GMP) activity. The protein contains an N-terminal NTP transferase domain, an L-beta-H domain, and a C-terminal PGM-like domain that belongs to the alpha-D-phosphohexomutase superfamily. This subfamily is limited to bacteria and archaea. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this group appear to lack conserved residues necessary for metal binding and catalytic activity. Other members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional
Probab=22.54 E-value=4.3e+02 Score=22.60 Aligned_cols=68 Identities=9% Similarity=-0.034 Sum_probs=34.1
Q ss_pred HcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHH---HHHhc-CCCCcEEEEEcC
Q 029908 6 EAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDES---ALSLW-HPNLKLLLVTLG 79 (185)
Q Consensus 6 ~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~---~~~l~-~~g~~~vvit~G 79 (185)
..+.+|++|+..... ...+.+.+.++ .++++.+|...-......++...+. +.++. +.+.+..+.+.|
T Consensus 166 ~~~lkIvvd~~~G~~----~~~~~~ll~~l--G~~v~~i~~~~d~~~~~~~~~~~~~l~~l~~~v~~~~adlgia~Dg 237 (441)
T cd05805 166 KSGLKVVIDYAYGVA----GIVLPGLLSRL--GCDVVILNARLDEDAPRTDTERQRSLDRLGRIVKALGADFGVIIDP 237 (441)
T ss_pred hcCCeEEEECCCchH----HHHHHHHHHHc--CCEEEEEecccCCccCCCCccchhHHHHHHHHHHhCCCCEEEEEcC
Confidence 468999999975321 22333344332 4677776655322212222221222 22322 367777777765
No 124
>TIGR01093 aroD 3-dehydroquinate dehydratase, type I. Type II 3-dehydroquinate dehydratase, designated AroQ, is described by TIGR01088.
Probab=22.10 E-value=3.7e+02 Score=20.69 Aligned_cols=73 Identities=16% Similarity=0.170 Sum_probs=41.1
Q ss_pred HHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhcc-ccEEEcC-----HHHHhHhhCCCCCCHHHHHHhcC-CCCcEEEE
Q 029908 4 AKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDK-AEVIKVS-----DVELEFLTGSDKIDDESALSLWH-PNLKLLLV 76 (185)
Q Consensus 4 a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~-~dii~~n-----~~E~~~l~~~~~~~~~~~~~l~~-~g~~~vvi 76 (185)
+++.+.+|+.--..-..-|+ .+.+.+.+.++... +|++++- ..+...+.. ...++.+ ...+.+.+
T Consensus 114 ~~~~~~kvI~S~H~f~~tp~-~~~l~~~~~~~~~~gaDivKia~~a~~~~D~~~ll~-------~~~~~~~~~~~p~i~~ 185 (228)
T TIGR01093 114 AKKGGTKIIMSYHDFQKTPS-WEEIVERLEKALSYGADIVKIAVMANSKEDVLTLLE-------ITNKVDEHADVPLITM 185 (228)
T ss_pred HHHCCCEEEEeccCCCCCCC-HHHHHHHHHHHHHhCCCEEEEEeccCCHHHHHHHHH-------HHHHHHhcCCCCEEEE
Confidence 46778888886532222222 45566666766655 8988862 233333320 0111111 35678999
Q ss_pred EcCCCceE
Q 029908 77 TLGEHGCR 84 (185)
Q Consensus 77 t~G~~G~~ 84 (185)
.+|..|..
T Consensus 186 ~MG~~G~~ 193 (228)
T TIGR01093 186 SMGDRGKI 193 (228)
T ss_pred eCCCCChh
Confidence 99998843
No 125
>PF07311 Dodecin: Dodecin; InterPro: IPR009923 This entry represents proteins with a Dodecin-like topology. Dodecin flavoprotein is a small dodecameric flavin-binding protein from Halobacterium salinarium (Halobacterium halobium) that contains two flavins stacked in a single binding pocket between two tryptophan residues to form an aromatic tetrade []. Dodecin binds riboflavin, although it appears to have a broad specificity for flavins. Lumichrome, a molecule associated with flavin metabolism, appears to be a ligand of dodecin, which could act as a waste-trapping device. ; PDB: 2VYX_L 2DEG_F 2V18_K 2V19_D 2UX9_B 2CZ8_E 2V21_F 2CC8_A 2CCB_A 2VX9_A ....
Probab=22.09 E-value=75 Score=19.86 Aligned_cols=22 Identities=9% Similarity=0.028 Sum_probs=18.6
Q ss_pred ChHHHHHHHHHHHHHhHHHhhc
Q 029908 128 DEPRLREILKFANACGALSTTK 149 (185)
Q Consensus 128 ~~~~~~~a~~~a~~~aa~~~~~ 149 (185)
|.+++++|++.|..-|+..+..
T Consensus 12 S~~S~edAv~~Av~~A~kTl~n 33 (66)
T PF07311_consen 12 SPKSWEDAVQNAVARASKTLRN 33 (66)
T ss_dssp ESSHHHHHHHHHHHHHHHHSSS
T ss_pred CCCCHHHHHHHHHHHHhhchhC
Confidence 6678999999999999887654
No 126
>PF10930 DUF2737: Protein of unknown function (DUF2737); InterPro: IPR020295 The proteins in this entry are uncharacterised.
Probab=22.08 E-value=99 Score=18.36 Aligned_cols=28 Identities=11% Similarity=0.209 Sum_probs=18.2
Q ss_pred CCCCCHHHHHHHHhcCcchhhhhhhhhhhh
Q 029908 154 PALPTESEALALLKRSTIIDKIMSWIFFWF 183 (185)
Q Consensus 154 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 183 (185)
..+|++||+.++=..-.+ +. ..|+|-|+
T Consensus 22 ~PmPsREELlkRnSFpsv-n~-NkYLN~m~ 49 (54)
T PF10930_consen 22 KPMPSREELLKRNSFPSV-NN-NKYLNRML 49 (54)
T ss_pred CCCCCHHHHHhhcCCCCC-ch-hHHHHHHH
Confidence 368999999877544332 22 45777775
No 127
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=22.07 E-value=2e+02 Score=24.13 Aligned_cols=26 Identities=19% Similarity=0.234 Sum_probs=18.5
Q ss_pred CHHHHHHhcCCCCcEEEEEcCCCceEE
Q 029908 59 DDESALSLWHPNLKLLLVTLGEHGCRY 85 (185)
Q Consensus 59 ~~~~~~~l~~~g~~~vvit~G~~G~~~ 85 (185)
+.+.++.|++.|.+.|.|..|+ |+.+
T Consensus 160 T~e~a~~Li~aGAD~ikVgiGp-GSic 185 (343)
T TIGR01305 160 TGEMVEELILSGADIVKVGIGP-GSVC 185 (343)
T ss_pred CHHHHHHHHHcCCCEEEEcccC-CCcc
Confidence 4456667888899999888774 4443
No 128
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=21.85 E-value=1.9e+02 Score=24.99 Aligned_cols=52 Identities=12% Similarity=0.131 Sum_probs=32.7
Q ss_pred hHHHHcCCeEEE-cCCCCCCCCCChHHHHHHHHHhhccccEEEc-CHHHHhHhh
Q 029908 2 KAAKEAGALLSY-DPNLRLPLWPSPEEAREQIMSIWDKAEVIKV-SDVELEFLT 53 (185)
Q Consensus 2 ~~a~~~g~~v~~-D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~-n~~E~~~l~ 53 (185)
..++++|+|+++ |.-.....+............+++..|.|.. ++.+.+.+.
T Consensus 140 ~e~~~~~~p~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li~aQse~D~~Rf~ 193 (419)
T COG1519 140 NELKRRGIPLVLVNARLSDRSFARYAKLKFLARLLFKNIDLILAQSEEDAQRFR 193 (419)
T ss_pred HHHHHcCCCEEEEeeeechhhhHHHHHHHHHHHHHHHhcceeeecCHHHHHHHH
Confidence 467888998664 4422222333345667777888888887774 555666554
No 129
>cd05831 Ribosomal_P1 Ribosomal protein P1. This subfamily represents the eukaryotic large ribosomal protein P1. Eukaryotic P1 and P2 are functionally equivalent to the bacterial protein L7/L12, but are not homologous to L7/L12. P1 is located in the L12 stalk, with proteins P2, P0, L11, and 28S rRNA. P1 and P2 are the only proteins in the ribosome to occur as multimers, always appearing as sets of heterodimers. Recent data indicate that eukaryotes have four copies (two heterodimers), while most archaeal species contain six copies of L12p (three homodimers) and bacteria may have four or six copies (two or three homodimers), depending on the species. Experiments using S. cerevisiae P1 and P2 indicate that P1 proteins are positioned more internally with limited reactivity in the C-terminal domains, while P2 proteins seem to be more externally located and are more likely to interact with other cellular components. In lower eukaryotes, P1 and P2 are further subdivided into P1A, P1B, P2A, and
Probab=21.14 E-value=2.4e+02 Score=19.19 Aligned_cols=40 Identities=25% Similarity=0.198 Sum_probs=28.3
Q ss_pred HHHHHhHHHhhccCCCCCCCCHHHHHHHHhcCcchhhhhhhhhh
Q 029908 138 FANACGALSTTKKGAIPALPTESEALALLKRSTIIDKIMSWIFF 181 (185)
Q Consensus 138 ~a~~~aa~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 181 (185)
+|+..|++.+.-.|.- |+.++|.++++...+.-. ..|.+.
T Consensus 2 lac~yAaLiL~d~~~~---~Tae~I~~ilkAaGveve-~~~~~~ 41 (103)
T cd05831 2 LACTYAALILHDDGIE---ITADNINALLKAAGVNVE-PYWPGL 41 (103)
T ss_pred hHHHHHHHHHccCCCC---CCHHHHHHHHHHcCCccc-HHHHHH
Confidence 5777788888766643 799999999987775433 446553
No 130
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=20.92 E-value=2.6e+02 Score=24.74 Aligned_cols=54 Identities=13% Similarity=0.176 Sum_probs=34.1
Q ss_pred ChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCH-HHHHHhcCCCCcEEEEEc
Q 029908 24 SPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDD-ESALSLWHPNLKLLLVTL 78 (185)
Q Consensus 24 ~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~-~~~~~l~~~g~~~vvit~ 78 (185)
..++.-++++-++..++++++++-- +.|++...++. +.++.|.+.|...++||+
T Consensus 144 G~qQRVEIlKaLyr~a~iLILDEPT-aVLTP~E~~~lf~~l~~l~~~G~tIi~ITH 198 (501)
T COG3845 144 GEQQRVEILKALYRGARLLILDEPT-AVLTPQEADELFEILRRLAAEGKTIIFITH 198 (501)
T ss_pred chhHHHHHHHHHhcCCCEEEEcCCc-ccCCHHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 3678899999999999999998751 11211111100 122355567888888887
No 131
>KOG0733 consensus Nuclear AAA ATPase (VCP subfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=20.80 E-value=1.5e+02 Score=27.24 Aligned_cols=79 Identities=16% Similarity=0.152 Sum_probs=53.8
Q ss_pred cCcccccccCCCcchHHHHHHHHHHH-------------ccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCCHHH
Q 029908 95 DAFRVKTVDTTGAGDAFVGALLCKIV-------------DDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPTESE 161 (185)
Q Consensus 95 ~~~~~~~~d~~GaGDaf~A~~~~~l~-------------~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~~~~ 161 (185)
|+..+-+..+.|||-+++|--+++=+ .|.+ |+|++.+.+....|...|=..+-....-.-.|.++.
T Consensus 222 PprGvLlHGPPGCGKT~lA~AiAgel~vPf~~isApeivSGvS-GESEkkiRelF~~A~~~aPcivFiDeIDAI~pkRe~ 300 (802)
T KOG0733|consen 222 PPRGVLLHGPPGCGKTSLANAIAGELGVPFLSISAPEIVSGVS-GESEKKIRELFDQAKSNAPCIVFIDEIDAITPKREE 300 (802)
T ss_pred CCCceeeeCCCCccHHHHHHHHhhhcCCceEeecchhhhcccC-cccHHHHHHHHHHHhccCCeEEEeecccccccchhh
Confidence 33344577889999999987776643 2554 789999999999998777665544443333477777
Q ss_pred HHHHHhcCcchhh
Q 029908 162 ALALLKRSTIIDK 174 (185)
Q Consensus 162 i~~~~~~~~~~~~ 174 (185)
-.+-|++.-+...
T Consensus 301 aqreMErRiVaQL 313 (802)
T KOG0733|consen 301 AQREMERRIVAQL 313 (802)
T ss_pred HHHHHHHHHHHHH
Confidence 7666665544443
No 132
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=20.16 E-value=1.6e+02 Score=23.03 Aligned_cols=32 Identities=22% Similarity=0.372 Sum_probs=20.4
Q ss_pred hHHHHcCCe--EEEcCCCCCCCCCChHHHHHHHHHhhccccEEE
Q 029908 2 KAAKEAGAL--LSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIK 43 (185)
Q Consensus 2 ~~a~~~g~~--v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~ 43 (185)
++.|+.|++ ++++|... -+.+..+++.+|++.
T Consensus 103 ~~Ik~~G~kaGv~lnP~Tp----------~~~i~~~l~~vD~Vl 136 (220)
T COG0036 103 QLIKELGVKAGLVLNPATP----------LEALEPVLDDVDLVL 136 (220)
T ss_pred HHHHHcCCeEEEEECCCCC----------HHHHHHHHhhCCEEE
Confidence 567888888 56666531 345566666777664
Done!