Query 029908
Match_columns 185
No_of_seqs 127 out of 1030
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 08:31:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029908.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029908hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qcv_A Putative 5-dehydro-2-de 100.0 2.7E-30 9.2E-35 210.7 17.6 162 2-170 163-327 (332)
2 3ljs_A Fructokinase; fructokia 100.0 2.7E-31 9.2E-36 217.4 11.0 163 2-171 154-331 (338)
3 3iq0_A Putative ribokinase II; 100.0 1.1E-30 3.7E-35 213.3 13.3 161 2-171 155-315 (330)
4 3pl2_A Sugar kinase, ribokinas 100.0 4.7E-30 1.6E-34 208.2 16.1 155 6-168 163-317 (319)
5 3ktn_A Carbohydrate kinase, PF 100.0 4E-30 1.4E-34 210.9 15.6 165 2-174 155-337 (346)
6 4du5_A PFKB; structural genomi 100.0 2.5E-30 8.5E-35 211.8 14.1 156 2-165 178-334 (336)
7 3hj6_A Fructokinase, FRK; fruc 100.0 3.5E-31 1.2E-35 215.9 7.5 158 2-167 169-326 (327)
8 1tyy_A Putative sugar kinase; 100.0 4.8E-30 1.6E-34 210.4 13.0 162 2-171 166-332 (339)
9 1v1a_A 2-keto-3-deoxygluconate 100.0 2.4E-29 8.2E-34 203.4 14.4 157 2-173 151-308 (309)
10 3kzh_A Probable sugar kinase; 100.0 4.8E-29 1.6E-33 203.3 14.1 158 4-176 156-317 (328)
11 2v78_A Fructokinase; transfera 100.0 1.4E-28 4.8E-33 199.2 14.9 150 12-169 160-311 (313)
12 2afb_A 2-keto-3-deoxygluconate 100.0 4.1E-28 1.4E-32 199.4 17.2 158 2-168 164-343 (351)
13 3h49_A Ribokinase; transferase 100.0 3.2E-28 1.1E-32 198.2 15.3 158 2-172 160-318 (325)
14 3ie7_A LIN2199 protein; phosph 100.0 3.7E-28 1.3E-32 197.2 14.3 152 2-175 157-310 (320)
15 4gm6_A PFKB family carbohydrat 100.0 4.6E-28 1.6E-32 199.0 14.7 159 2-169 176-345 (351)
16 2c4e_A Sugar kinase MJ0406; tr 100.0 2.3E-28 8E-33 197.1 12.7 152 2-170 149-301 (302)
17 4e69_A 2-dehydro-3-deoxyglucon 100.0 7.6E-28 2.6E-32 196.5 15.7 145 2-154 172-317 (328)
18 2dcn_A Hypothetical fructokina 100.0 8.9E-28 3E-32 194.2 15.2 148 12-169 160-309 (311)
19 2jg1_A Tagatose-6-phosphate ki 100.0 7.8E-28 2.7E-32 196.5 15.0 150 2-172 171-328 (330)
20 1rkd_A Ribokinase; carbohydrat 100.0 1.8E-27 6.1E-32 192.2 16.9 151 2-169 154-308 (309)
21 3ry7_A Ribokinase; transferase 100.0 5.1E-28 1.8E-32 194.9 13.1 146 2-164 153-303 (304)
22 3b1n_A Ribokinase, putative; r 100.0 5.2E-28 1.8E-32 197.3 12.8 153 2-170 154-307 (326)
23 2pkf_A Adenosine kinase; trans 100.0 6.5E-28 2.2E-32 197.2 13.2 156 2-173 167-324 (334)
24 2abq_A Fructose 1-phosphate ki 100.0 2.6E-27 9.1E-32 191.1 16.0 149 2-173 149-302 (306)
25 2jg5_A Fructose 1-phosphate ki 99.9 2.7E-27 9.3E-32 190.8 15.3 149 2-173 149-302 (306)
26 3ikh_A Carbohydrate kinase; tr 99.9 8.1E-28 2.8E-32 193.8 11.8 140 2-172 151-292 (299)
27 2nwh_A AGR_C_3442P, carbohydra 99.9 1.4E-27 4.8E-32 193.8 12.8 154 2-170 154-309 (317)
28 3umo_A 6-phosphofructokinase i 99.9 3.8E-27 1.3E-31 190.3 15.3 147 2-169 154-307 (309)
29 3lhx_A Ketodeoxygluconokinase; 99.9 3.8E-27 1.3E-31 191.3 15.1 145 2-154 156-304 (319)
30 2f02_A Tagatose-6-phosphate ki 99.9 5.4E-27 1.8E-31 190.8 15.9 151 2-173 153-312 (323)
31 3ewm_A Uncharacterized sugar k 99.9 2.6E-27 8.8E-32 191.9 13.9 151 2-170 149-302 (313)
32 3go6_A Ribokinase RBSK; phosph 99.9 2.8E-27 9.5E-32 191.8 13.6 140 2-170 163-306 (310)
33 2rbc_A Sugar kinase, AGR_C_456 99.9 1.9E-27 6.4E-32 195.4 12.7 152 2-171 176-331 (343)
34 1vm7_A Ribokinase; TM0960, str 99.9 2.8E-27 9.4E-32 191.8 11.3 149 3-168 158-310 (311)
35 2fv7_A Ribokinase; structural 99.9 7.7E-27 2.6E-31 190.6 12.6 147 2-164 174-328 (331)
36 2qhp_A Fructokinase; NP_810670 99.9 1.5E-26 5.2E-31 185.6 13.1 143 3-157 140-288 (296)
37 3cqd_A 6-phosphofructokinase i 99.9 2.7E-26 9.1E-31 185.3 14.4 147 2-169 154-307 (309)
38 3kd6_A Carbohydrate kinase, PF 99.9 1.5E-26 5.2E-31 187.5 12.3 156 6-169 141-298 (313)
39 4e3a_A Sugar kinase protein; s 99.9 2E-26 7E-31 189.8 13.2 150 2-164 196-348 (352)
40 4e84_A D-beta-D-heptose 7-phos 99.9 2.3E-26 7.9E-31 189.6 13.4 139 2-163 208-351 (352)
41 2ajr_A Sugar kinase, PFKB fami 99.9 1.2E-26 4.1E-31 189.4 11.6 149 2-172 170-328 (331)
42 3vas_A Putative adenosine kina 99.9 1.4E-25 4.9E-30 185.8 11.8 149 2-163 201-365 (370)
43 3uq6_A Adenosine kinase, putat 99.9 1.9E-25 6.4E-30 185.2 9.6 153 2-167 203-371 (372)
44 3otx_A Adenosine kinase, putat 99.9 1.8E-24 6.2E-29 177.4 15.2 145 2-159 185-342 (347)
45 3loo_A Anopheles gambiae adeno 99.9 6.7E-25 2.3E-29 181.4 11.6 141 2-153 199-354 (365)
46 1vk4_A PFKB carbohydrate kinas 99.9 2.7E-25 9.2E-30 179.0 8.7 150 2-162 139-292 (298)
47 3bf5_A Ribokinase related prot 99.9 1.6E-25 5.4E-30 181.2 7.3 139 10-170 162-302 (306)
48 1bx4_A Protein (adenosine kina 99.9 7E-24 2.4E-28 173.7 13.2 141 2-153 184-337 (345)
49 2ddm_A Pyridoxine kinase; pyri 99.9 1.1E-23 3.8E-28 168.3 13.6 143 2-152 111-269 (283)
50 1ub0_A THID, phosphomethylpyri 99.9 4E-23 1.4E-27 162.8 14.6 140 2-150 90-244 (258)
51 1jxh_A Phosphomethylpyrimidine 99.9 1E-22 3.4E-27 163.4 14.9 141 2-151 114-270 (288)
52 2i5b_A Phosphomethylpyrimidine 99.9 3.6E-22 1.2E-26 158.5 15.1 143 2-151 94-251 (271)
53 2abs_A Adenosine kinase, AK; r 99.9 1.3E-22 4.6E-27 168.5 12.6 141 2-153 203-375 (383)
54 2yxt_A Pyridoxal kinase; beta 99.9 3.7E-22 1.3E-26 161.5 11.9 139 2-149 99-269 (312)
55 3mbh_A Putative phosphomethylp 99.9 8.6E-22 3E-26 158.4 12.5 139 4-150 102-259 (291)
56 2hlz_A Ketohexokinase; non-pro 99.9 1.2E-21 4E-26 158.6 12.0 126 8-153 179-309 (312)
57 3h74_A Pyridoxal kinase; PSI-I 99.9 2.7E-21 9.3E-26 154.9 11.9 135 7-149 100-248 (282)
58 3pzs_A PM kinase, pyridoxamine 99.9 9.1E-21 3.1E-25 152.2 13.8 139 2-149 100-259 (289)
59 3zs7_A Pyridoxal kinase; trans 99.8 3E-20 1E-24 150.0 12.2 132 9-150 112-262 (300)
60 3rm5_A Hydroxymethylpyrimidine 99.7 1.4E-16 4.9E-21 138.1 11.6 135 5-148 116-274 (550)
61 1ekq_A Hydroxyethylthiazole ki 99.6 2E-15 6.7E-20 120.2 12.6 127 2-141 82-223 (272)
62 1v8a_A Hydroxyethylthiazole ki 99.3 1.2E-11 4.1E-16 97.9 8.6 125 2-140 80-218 (265)
63 3dzv_A 4-methyl-5-(beta-hydrox 99.1 1.4E-09 4.8E-14 86.3 14.0 128 2-142 82-229 (273)
64 3bgk_A SMU.573, putative uncha 99.1 3.9E-10 1.3E-14 91.2 10.0 138 7-167 154-303 (311)
65 2r3b_A YJEF-related protein; p 99.1 8.7E-10 3E-14 89.1 10.7 117 7-145 140-264 (310)
66 3rss_A Putative uncharacterize 98.8 1.7E-08 5.8E-13 86.4 10.9 145 4-168 344-495 (502)
67 3rpz_A ADP/ATP-dependent NAD(P 98.8 1.4E-08 4.8E-13 80.8 9.7 144 4-168 121-273 (279)
68 3nl6_A Thiamine biosynthetic b 98.6 7.3E-07 2.5E-11 77.0 13.0 127 2-141 328-494 (540)
69 3hpd_A Hydroxyethylthiazole ki 98.6 4.9E-07 1.7E-11 71.3 10.3 125 2-140 80-218 (265)
70 3k5w_A Carbohydrate kinase; 11 97.7 0.00056 1.9E-08 58.1 12.3 141 10-171 317-469 (475)
71 3drw_A ADP-specific phosphofru 96.1 0.027 9.1E-07 47.7 8.8 47 5-55 273-319 (474)
72 1l2l_A ADP-dependent glucokina 76.0 1.9 6.5E-05 36.2 3.3 43 5-52 260-302 (457)
73 1ua4_A Glucokinase, ADP-depend 73.7 2.7 9.1E-05 35.3 3.7 45 5-54 257-301 (455)
74 1gc5_A ADP-dependent glucokina 73.2 2.8 9.6E-05 35.3 3.7 44 5-53 270-313 (467)
75 1ztd_A Hypothetical protein PF 58.7 10 0.00034 25.4 3.4 33 101-139 63-95 (133)
76 1ua4_A Glucokinase, ADP-depend 58.4 21 0.00073 29.8 6.2 17 132-148 358-374 (455)
77 1l2l_A ADP-dependent glucokina 51.1 35 0.0012 28.5 6.3 21 100-120 434-455 (457)
78 1gc5_A ADP-dependent glucokina 50.6 38 0.0013 28.4 6.4 21 100-120 442-463 (467)
79 3cra_A Protein MAZG; tandem-re 36.0 48 0.0016 25.6 4.5 58 107-171 196-260 (265)
80 2yxh_A MAZG-related protein; T 24.3 1.6E+02 0.0053 19.4 6.3 56 107-170 54-113 (116)
81 2da7_A Zinc finger homeobox pr 20.5 62 0.0021 19.7 2.1 26 155-183 28-53 (71)
82 2khf_A PLNJ; anti-microbial, b 20.5 29 0.00099 16.2 0.5 6 178-183 3-8 (26)
No 1
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=99.97 E-value=2.7e-30 Score=210.73 Aligned_cols=162 Identities=22% Similarity=0.394 Sum_probs=139.5
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCC--CCHHHHHHhcCCCCcEEEEEcC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDK--IDDESALSLWHPNLKLLLVTLG 79 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~--~~~~~~~~l~~~g~~~vvit~G 79 (185)
+.++++|+++++||+.++..|.+.+...+.+.++++++|++++|++|+..|++... ...+.+.++++.|++.|+||.|
T Consensus 163 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~l~~~g~~~vvvt~G 242 (332)
T 2qcv_A 163 RLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENRTEKGDNDETIRYLFKHSPELIVIKHG 242 (332)
T ss_dssp HHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHHTTCSSCCCHHHHHHHHTTSSCSEEEEECG
T ss_pred HHHHHCCCEEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCcCCCHHHHHHHHHHcCCCEEEEEEC
Confidence 56788999999999998888887667777888899999999999999999998752 2223345777889999999999
Q ss_pred CCceEEEEc-CceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCC
Q 029908 80 EHGCRYYTK-SFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPT 158 (185)
Q Consensus 80 ~~G~~~~~~-~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~ 158 (185)
++|++++++ ++.+++|+++++++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.|+.+.+|+
T Consensus 243 ~~G~~~~~~~~~~~~~~~~~v~vvdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~ 315 (332)
T 2qcv_A 243 VEGSFAYTKAGEAYRGYAYKTKVLKTFGAGDSYASAFLYALISGKG-------IETALKYGSASASIVVSKHSSSDAMPS 315 (332)
T ss_dssp GGCEEEEETTSCEEEECCBCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHC-----CCCC
T ss_pred CcceEEEecCCceEEcCCCCccccCCCCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHccCCCccCCCC
Confidence 999999987 678899999999999999999999999999999999 999999999999999999999888999
Q ss_pred HHHHHHHHhcCc
Q 029908 159 ESEALALLKRST 170 (185)
Q Consensus 159 ~~~i~~~~~~~~ 170 (185)
++++++++++..
T Consensus 316 ~~ev~~~l~~~~ 327 (332)
T 2qcv_A 316 VEEIEALIEKDE 327 (332)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHhcCC
Confidence 999999987653
No 2
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=99.97 E-value=2.7e-31 Score=217.38 Aligned_cols=163 Identities=37% Similarity=0.618 Sum_probs=131.9
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHH-HHHHhcCCCCcEEEEEcCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDE-SALSLWHPNLKLLLVTLGE 80 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~-~~~~l~~~g~~~vvit~G~ 80 (185)
+.++++|++|++||++++.+|.+.....+.+.++++++|++++|++|++.|++....+.+ .++++++.|++.||||.|.
T Consensus 154 ~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~l~~~g~~~vvvT~G~ 233 (338)
T 3ljs_A 154 RRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTLAADANAVIQQLWQGRAQLLLVTDAA 233 (338)
T ss_dssp HHHHHTTCEEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHHHHHHTSCHHHHHHHHTTTTCCEEEEEETT
T ss_pred HHHHHcCCEEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCChhHHHHHHHHHhcCCCEEEEeeCC
Confidence 567889999999999999999766666788889999999999999999999986654432 3457778899999999999
Q ss_pred CceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHcc--------------CCCCCChHHHHHHHHHHHHHhHHH
Q 029908 81 HGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDD--------------QSAIEDEPRLREILKFANACGALS 146 (185)
Q Consensus 81 ~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g--------------~~~~~~~~~~~~a~~~a~~~aa~~ 146 (185)
+|++++++++.+++|+++++++|++||||+|+|+|+++|++| .+ +++|+++|+++|+.+
T Consensus 234 ~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~g~~~~~~~~~~~~~~~~-------l~~al~~A~~~aa~~ 306 (338)
T 3ljs_A 234 GPVHWYTRTAGGEVPTFRVQVQDSNAAGDAFVGGMLYTFAQQFDDAAALIDFCHDPES-------IVSTLRFAAAVGALA 306 (338)
T ss_dssp EEEEEEESSCEEEECC-----------CHHHHHHHHHHHHHHCSSTHHHHHHHTCHHH-------HHHHHHHHHHHHGGG
T ss_pred CceEEEECCceEEeCCCCCccCCCCCccHHHHHHHHHHHHhCCCcccchhccccChHH-------HHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999 66 999999999999999
Q ss_pred hhccCCCCCCCCHHHHHHHHhcCcc
Q 029908 147 TTKKGAIPALPTESEALALLKRSTI 171 (185)
Q Consensus 147 ~~~~g~~~~~~~~~~i~~~~~~~~~ 171 (185)
+++.|+.+++|+++++++++++..-
T Consensus 307 v~~~Ga~~~~p~~~ev~~~~~~~~~ 331 (338)
T 3ljs_A 307 VTRQGAFTAMPMLSEVLSLIQEQSE 331 (338)
T ss_dssp C----CCCCTTHHHHHHHHHHHHHC
T ss_pred hCCCCCCCCCCCHHHHHHHHhhhcc
Confidence 9999999899999999999876543
No 3
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=99.97 E-value=1.1e-30 Score=213.28 Aligned_cols=161 Identities=26% Similarity=0.457 Sum_probs=143.2
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEH 81 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~~ 81 (185)
+.++++|++|++||+.+..+|.. +...+.+.++++++|++++|++|++.|++.... .+.++++.+.|++.|++|.|++
T Consensus 155 ~~a~~~g~~v~~D~~~~~~~~~~-~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~-~~~~~~l~~~g~~~vvvT~G~~ 232 (330)
T 3iq0_A 155 TIVKANGGVISFDPNIRKEMLDI-PEMRDALHFVLELTDIYMPSEGEVLLLSPHSTP-ERAIAGFLEEGVKEVIVKRGNQ 232 (330)
T ss_dssp HHHHHTTCEEEEECCCCGGGGGS-HHHHHHHHHHHHTCSEECCBGGGTTTTCSCSSH-HHHHHHHHHHTCSEEEEECGGG
T ss_pred HHHHHcCCEEEEcCCCCccccCc-HHHHHHHHHHHhhCCEEecCHHHHHHHhCCCCH-HHHHHHHHHcCCCEEEEEeCCC
Confidence 56788999999999999888874 346778889999999999999999999987432 2334466678999999999999
Q ss_pred ceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCCHHH
Q 029908 82 GCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPTESE 161 (185)
Q Consensus 82 G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~~~~ 161 (185)
|++++++++.+++|+++++++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.|+.+++|++++
T Consensus 233 G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~~e 305 (330)
T 3iq0_A 233 GASYYSANEQFHVESYPVEEVDPTGAGDCFGGAWIACRQLGFD-------AHRALQYANACGALAVTRRGPMEGTSRLME 305 (330)
T ss_dssp CEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSCSSSTTCCCHHH
T ss_pred ceEEEECCceEEecCCCCccCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCcCCCCCCCCHHH
Confidence 9999999999999999999999999999999999999999999 999999999999999999999888999999
Q ss_pred HHHHHhcCcc
Q 029908 162 ALALLKRSTI 171 (185)
Q Consensus 162 i~~~~~~~~~ 171 (185)
+++++++...
T Consensus 306 v~~~~~~~~~ 315 (330)
T 3iq0_A 306 IETFIQRHDM 315 (330)
T ss_dssp HHHHHHHC--
T ss_pred HHHHHHhccc
Confidence 9999987664
No 4
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=99.97 E-value=4.7e-30 Score=208.22 Aligned_cols=155 Identities=30% Similarity=0.410 Sum_probs=140.6
Q ss_pred HcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCCCceEE
Q 029908 6 EAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGCRY 85 (185)
Q Consensus 6 ~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~~G~~~ 85 (185)
+.+.++++||++++.+|.+.....+.+.++++++|++++|++|++.|++.... .+.++++.+.|++.|++|+|.+|+++
T Consensus 163 ~~~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~-~~~~~~l~~~g~~~vvvt~G~~G~~~ 241 (319)
T 3pl2_A 163 ANRRHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAVGETEP-ERAGRALLERGVELAIVKQGPKGVMA 241 (319)
T ss_dssp TTCSCEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECHHHHHHHHSCCSH-HHHHHHHHHTTCSEEEEEEETTEEEE
T ss_pred HHCCcEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCHHHHHHHcCCCCH-HHHHHHHHhcCCCEEEEEECCCCeEE
Confidence 34778999999999999888888889999999999999999999999987532 23344677789999999999999999
Q ss_pred EEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCCHHHHHHH
Q 029908 86 YTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPTESEALAL 165 (185)
Q Consensus 86 ~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~~~~i~~~ 165 (185)
+++++.+++|+++++++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.|+...+|+++|++++
T Consensus 242 ~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~ 314 (319)
T 3pl2_A 242 MTKDETVEVPPFFVDVINGLGAGDAFGGALCHGLLSEWP-------LEKVLRFANTAGALVASRLECSTAMPTTDEVEAS 314 (319)
T ss_dssp ECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSCSGGGCCCHHHHHHH
T ss_pred EECCceEEeCCcccCCCCCcCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhccCCcCCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999 9999999999999999999998889999999998
Q ss_pred Hhc
Q 029908 166 LKR 168 (185)
Q Consensus 166 ~~~ 168 (185)
+++
T Consensus 315 l~~ 317 (319)
T 3pl2_A 315 LNQ 317 (319)
T ss_dssp CC-
T ss_pred Hhc
Confidence 864
No 5
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=99.97 E-value=4e-30 Score=210.90 Aligned_cols=165 Identities=24% Similarity=0.247 Sum_probs=144.8
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCCh--HHHHHHHHHhhccccEEEcCHHHHhHhhCCC-CC---CHHH----HHHhcC-CC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSP--EEAREQIMSIWDKAEVIKVSDVELEFLTGSD-KI---DDES----ALSLWH-PN 70 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~--~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~-~~---~~~~----~~~l~~-~g 70 (185)
+.++++|++|++||++++.+|... +...+.+.++++++|++++|++|++.|++.. .. +.++ +++|.+ .|
T Consensus 155 ~~a~~~g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~~~l~~~~g 234 (346)
T 3ktn_A 155 QKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLGFIPREDLEGEAQETELIQRFMSQYN 234 (346)
T ss_dssp HHHHHTTCEEEEECCCCGGGCCHHHHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCCCTTSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCEEEEeCCCChHHcCCccHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCCCccccchHHHHHHHHHHHHhcC
Confidence 567889999999999999999743 5677889999999999999999999999876 32 1122 235555 49
Q ss_pred CcEEEEEcCCCc-------eEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHh
Q 029908 71 LKLLLVTLGEHG-------CRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACG 143 (185)
Q Consensus 71 ~~~vvit~G~~G-------~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~a 143 (185)
++.|+||+|.+| ++++++++.+++|+++++++|++||||+|+|+|+++|++|.+ +++|+++|+++|
T Consensus 235 ~~~vvvT~G~~G~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~-------l~~a~~~A~a~a 307 (346)
T 3ktn_A 235 LEWFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPLLNLDRIGAGDAYAAGILYGYSQNWS-------LEKAVTFATVNG 307 (346)
T ss_dssp CSEEEEEEEEECSSCEEEEEEEECSSCEEECCCEECCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHH
T ss_pred CCEEEEecCccccccCcceEEEEECCceEEeCCCccccCCCCchhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHH
Confidence 999999999998 888888889999999999999999999999999999999999 999999999999
Q ss_pred HHHhhccCCCCCCCCHHHHHHHHhcCcchhh
Q 029908 144 ALSTTKKGAIPALPTESEALALLKRSTIIDK 174 (185)
Q Consensus 144 a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~ 174 (185)
+.++++.|+.+ +|+++++++++++....++
T Consensus 308 a~~v~~~G~~~-~p~~~ev~~~l~~~~~~~~ 337 (346)
T 3ktn_A 308 VLAHTIQGDIP-LTTVKQVNHVLEHPNIDLI 337 (346)
T ss_dssp HHHTTSSSSCC-CCCHHHHHHHHHCTTCCCC
T ss_pred HHHhccCCCCC-CCCHHHHHHHHhcCCceEe
Confidence 99999999986 8999999999998876554
No 6
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=99.97 E-value=2.5e-30 Score=211.76 Aligned_cols=156 Identities=32% Similarity=0.449 Sum_probs=130.3
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEH 81 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~~ 81 (185)
+.++++|++|++||++++..|.+.+...+.+.++++++|++++|++|++.|++.... .+.++.+.+.|++.|+||.|.+
T Consensus 178 ~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~l~g~~~~-~~~~~~l~~~g~~~vvvt~G~~ 256 (336)
T 4du5_A 178 DLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTGETTP-EGVARFYRQLGAKLVVVKLGAE 256 (336)
T ss_dssp HHHHHTTCEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBHHHHHHHHCCCSH-HHHHHHHHHTTCSEEEEECGGG
T ss_pred HHHHHCCCEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCHHHHHHHhCCCCH-HHHHHHHHhcCCCEEEEEecCC
Confidence 467889999999999999999877777888999999999999999999999987532 2334467778999999999999
Q ss_pred ceEEEEcCceeEecCcccc-cccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCCHH
Q 029908 82 GCRYYTKSFKGAVDAFRVK-TVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPTES 160 (185)
Q Consensus 82 G~~~~~~~~~~~~~~~~~~-~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~~~ 160 (185)
|++++++++.+++|+++++ ++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.|+.+++|+++
T Consensus 257 G~~~~~~~~~~~~~~~~v~~vvdttGAGDaf~a~~~~~l~~g~~-------l~~a~~~A~~~aa~~v~~~G~~~~~p~~~ 329 (336)
T 4du5_A 257 GAYFDGEAGSGRVAGFPVAEVVDTVGAGDGFAVGVISALLDGLG-------VPEAVKRGAWIGARAVQVLGDSEGLPTRA 329 (336)
T ss_dssp CEEEEETTEEEEECCCCC-------CHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHC------CCCCHH
T ss_pred ceEEEECCeEEEeCCccCCCCCCCccchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhccCCCccCCCCHH
Confidence 9999999999999999997 999999999999999999999999 99999999999999999999998899999
Q ss_pred HHHHH
Q 029908 161 EALAL 165 (185)
Q Consensus 161 ~i~~~ 165 (185)
|++++
T Consensus 330 ev~~~ 334 (336)
T 4du5_A 330 ELNAA 334 (336)
T ss_dssp HHHCC
T ss_pred HHHhc
Confidence 99764
No 7
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=99.97 E-value=3.5e-31 Score=215.92 Aligned_cols=158 Identities=26% Similarity=0.459 Sum_probs=119.9
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEH 81 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~~ 81 (185)
+.++++|++|++||++++.+|.+.+...+.+.++++++|++++|++|++.|++..... +.++++.+.|++.|++|+|++
T Consensus 169 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~-~~~~~l~~~g~~~vvvt~G~~ 247 (327)
T 3hj6_A 169 NYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGPDSPE-NYVKRYLELGVKAVILTLGEE 247 (327)
T ss_dssp HHHHHTTCEEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBHHHHHHHHTTSCSS-GGGGGGTTTTCSEEEEECSTT
T ss_pred HHHHHCCCEEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCCCCHH-HHHHHHHhCCCCEEEEEECCC
Confidence 5678899999999999988888655667788899999999999999999999874432 334567778999999999999
Q ss_pred ceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCCHHH
Q 029908 82 GCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPTESE 161 (185)
Q Consensus 82 G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~~~~ 161 (185)
|++++++++.+++|+++++++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.|+..++|++++
T Consensus 248 G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~~-------~~~a~~~A~a~aa~~v~~~G~~~~~p~~~e 320 (327)
T 3hj6_A 248 GVIASDGEEIIRIPAFSEDAVDVTGAGDAFWSGFICGLLDGYT-------VKRSIKLGNGVAAFKIRGVGALSPVPSKED 320 (327)
T ss_dssp CEEEECSSCEEESCSSTTC-----CCHHHHHHHHHHTTSSCST-------THHHHHHHHCCCSSCC--------------
T ss_pred ceEEEeCCeeEEcCCcccccCCCcChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCCCCCCCCHHH
Confidence 9999999899999999999999999999999999999999999 999999999999999999999888999999
Q ss_pred HHHHHh
Q 029908 162 ALALLK 167 (185)
Q Consensus 162 i~~~~~ 167 (185)
++++++
T Consensus 321 v~~~l~ 326 (327)
T 3hj6_A 321 IIKEYN 326 (327)
T ss_dssp ------
T ss_pred HHHHhc
Confidence 998874
No 8
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=99.97 E-value=4.8e-30 Score=210.39 Aligned_cols=162 Identities=35% Similarity=0.482 Sum_probs=141.3
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEH 81 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~~ 81 (185)
+.++++|++|++||+++..+|.+.+...+.+.++++++|++++|++|++.|++..+.. +.++++.+.|++.||||.|++
T Consensus 166 ~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~~~~~-~~~~~l~~~g~~~VvvT~G~~ 244 (339)
T 1tyy_A 166 RRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGASHWQ-DARYYLRDLGCDTTIISLGAD 244 (339)
T ss_dssp HHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHCCSSGG-GGSSTTGGGTCSCEEEECGGG
T ss_pred HHHHHcCCEEEEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCCCCHH-HHHHHHHHcCCCEEEEEECCC
Confidence 5678899999999999988887656677788889999999999999999999875432 223366678999999999999
Q ss_pred ceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHcc-----CCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCC
Q 029908 82 GCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDD-----QSAIEDEPRLREILKFANACGALSTTKKGAIPAL 156 (185)
Q Consensus 82 G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g-----~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~ 156 (185)
|++++++++.+++|+++++++|++||||+|+|+|+++|++| .+ +++|+++|+++|+.++++.|+.+++
T Consensus 245 G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~~~~~~-------l~~a~~~A~a~aa~~v~~~G~~~~~ 317 (339)
T 1tyy_A 245 GALLITAEGEFHFPAPRVDVVDTTGAGDAFVGGLLFTLSRANCWDHAL-------LAEAISNANACGAMAVTAKGAMTAL 317 (339)
T ss_dssp CEEEESSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHTTSSSCCHHH-------HHHHHHHHHHHHHHGGGSSSTTTTC
T ss_pred ceEEEeCCceEEcCCCCCCcCCCCCchHHHHHHHHHHHHhcccccccc-------HHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999888889999999999999999999999999999997 66 9999999999999999999998888
Q ss_pred CCHHHHHHHHhcCcc
Q 029908 157 PTESEALALLKRSTI 171 (185)
Q Consensus 157 ~~~~~i~~~~~~~~~ 171 (185)
|+++++++++++...
T Consensus 318 p~~~ev~~~l~~~~~ 332 (339)
T 1tyy_A 318 PFPDQLNTFLSSHSL 332 (339)
T ss_dssp CCHHHHHHHHC----
T ss_pred CCHHHHHHHHhcCcc
Confidence 999999999987664
No 9
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=99.96 E-value=2.4e-29 Score=203.35 Aligned_cols=157 Identities=31% Similarity=0.392 Sum_probs=134.2
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEH 81 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~~ 81 (185)
+.++++|+++++||++++.+|. .+...+.+.++++++|++++|++|+..|++.. +++.+ +.|++.|++|.|++
T Consensus 151 ~~a~~~g~~v~~D~~~~~~~~~-~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~----~~~~~--~~g~~~vvvt~G~~ 223 (309)
T 1v1a_A 151 EEAKRRGVRVSLDVNYRQTLWS-PEEARGFLERALPGVDLLFLSEEEAELLFGRV----EEALR--ALSAPEVVLKRGAK 223 (309)
T ss_dssp HHHHTTTCEEEEECCCCTTTSC-HHHHHHHHHHHGGGCSEEEEEHHHHHHHHSSH----HHHHH--HTCCSEEEEECGGG
T ss_pred HHHHHcCCEEEEeCCCCcccCC-HHHHHHHHHHHHHhCCEEECcHHHHHHHhCCH----HHHHH--hcCCCEEEEEecCC
Confidence 4677889999999999988885 56667788899999999999999999999764 22223 57999999999999
Q ss_pred ceEEEEc-CceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCCHH
Q 029908 82 GCRYYTK-SFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPTES 160 (185)
Q Consensus 82 G~~~~~~-~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~~~ 160 (185)
|+++ ++ ++.+++|+++++++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.|+.+++|+++
T Consensus 224 G~~~-~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~~G~~~~~~~~~ 295 (309)
T 1v1a_A 224 GAWA-FVDGRRVEGSAFAVEAVDPVGAGDAFAAGYLAGAVWGLP-------VEERLRLANLLGASVAASRGDHEGAPYRE 295 (309)
T ss_dssp CEEE-EETTEEEECCCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSTTTTTCCCHH
T ss_pred CeeE-ecCCcEEEeCCCCCCcCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCCCcCCCCHH
Confidence 9998 65 677889999999999999999999999999999999 99999999999999999999988889999
Q ss_pred HHHHHHhcCcchh
Q 029908 161 EALALLKRSTIID 173 (185)
Q Consensus 161 ~i~~~~~~~~~~~ 173 (185)
++++++++..-++
T Consensus 296 ~v~~~~~~~~~~~ 308 (309)
T 1v1a_A 296 DLEVLLKATQTFM 308 (309)
T ss_dssp HHTTCC-------
T ss_pred HHHHHHhhcCCcc
Confidence 9988876654443
No 10
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=99.96 E-value=4.8e-29 Score=203.33 Aligned_cols=158 Identities=22% Similarity=0.266 Sum_probs=140.0
Q ss_pred HHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHH----HHhcCCCCcEEEEEcC
Q 029908 4 AKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESA----LSLWHPNLKLLLVTLG 79 (185)
Q Consensus 4 a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~----~~l~~~g~~~vvit~G 79 (185)
++++|++|++||+. ....+.+.++++++|++++|++|++.|++....+.++. +++.+.|++.|+||.|
T Consensus 156 a~~~~~~v~~D~~~--------~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G 227 (328)
T 3kzh_A 156 NFKDKTNFILDPVS--------AEKASWVKHLIKDFHTIKPNRHEAEILAGFPITDTDDLIKASNYFLGLGIKKVFISLD 227 (328)
T ss_dssp HHTTTSEEEEECCS--------HHHHHTSTTTGGGCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHHHTCCEEEEECG
T ss_pred HhhcCCcEEEEeCC--------HHHHHHHHHHhcCCcEEeCCHHHHHHHHCCCCCCHHHHHHHHHHHHHhCCCEEEEEeC
Confidence 66789999999984 22345567789999999999999999999775544332 3566679999999999
Q ss_pred CCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCCH
Q 029908 80 EHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPTE 159 (185)
Q Consensus 80 ~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~~ 159 (185)
.+|++++++++.+++|+++++++|++||||+|+|||+++|++|.+ +++|+++|+++|+.++++.|+.++.|++
T Consensus 228 ~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~~-------~~~a~~~A~a~aa~~v~~~G~~~~~~~~ 300 (328)
T 3kzh_A 228 ADGIFYNDGVSCGKIKATEVDVKNVTGAGDSFVAGLGYGYMNKMP-------IEDIVKFAMTMSNITISHEETIHPDMAL 300 (328)
T ss_dssp GGCEEEECSSCEEEEEESSCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSSCTTCSH
T ss_pred CCCEEEEeCCceEEecCCCcccCCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCCCCCcCCH
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999899999
Q ss_pred HHHHHHHhcCcchhhhh
Q 029908 160 SEALALLKRSTIIDKIM 176 (185)
Q Consensus 160 ~~i~~~~~~~~~~~~~~ 176 (185)
+++++++++...++|..
T Consensus 301 ~~v~~~~~~~~~~~~~~ 317 (328)
T 3kzh_A 301 DTVLAKLEKTTWEEEKY 317 (328)
T ss_dssp HHHHHHHHTCCEEEEEE
T ss_pred HHHHHHhhhcchhhhhc
Confidence 99999999998887754
No 11
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=99.96 E-value=1.4e-28 Score=199.15 Aligned_cols=150 Identities=31% Similarity=0.422 Sum_probs=134.9
Q ss_pred EEcCCCCCCCCCChHHHHHHHHHhhcccc--EEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCCCceEEEEcC
Q 029908 12 SYDPNLRLPLWPSPEEAREQIMSIWDKAE--VIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYTKS 89 (185)
Q Consensus 12 ~~D~~~~~~~~~~~~~~~~~~~~~l~~~d--ii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~~G~~~~~~~ 89 (185)
++||+.++.+|.+.+...+.+.++++++| ++++|++|++.|++.... .+.++++.+.|++.|++|+|++|+++++++
T Consensus 160 ~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E~~~l~g~~~~-~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~ 238 (313)
T 2v78_A 160 SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLDVTDP-DEAYRKYKELGVKVLLYKLGSKGAIAYKDN 238 (313)
T ss_dssp EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECHHHHHHHHSCCCH-HHHHHHHHHTTEEEEEEECGGGCEEEEETT
T ss_pred CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcHHHHHHHhCCCCH-HHHHHHHHhCCCCEEEEEECCCCcEEeeCC
Confidence 99999998889766677788889999999 999999999999986432 233446777899999999999999999888
Q ss_pred ceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCCHHHHHHHHhcC
Q 029908 90 FKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPTESEALALLKRS 169 (185)
Q Consensus 90 ~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~~~~i~~~~~~~ 169 (185)
+.+++|+++++++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.|+.+++|++++++++++++
T Consensus 239 ~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~v~~~~~~~ 311 (313)
T 2v78_A 239 VKAFKDAYKVPVEDPTGAGDAMAGTFVSLYLQGKD-------IEYSLAHGIAASTLVITVRGDNELTPTLEDAERFLNEF 311 (313)
T ss_dssp EEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSSTTCCCHHHHHHHHHHC
T ss_pred cEEEeCCCcCCccCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Confidence 88899999999999999999999999999999999 99999999999999999999988889999999998764
No 12
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.96 E-value=4.1e-28 Score=199.38 Aligned_cols=158 Identities=26% Similarity=0.354 Sum_probs=136.9
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCC---------CHHH----HHHhcC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKI---------DDES----ALSLWH 68 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~---------~~~~----~~~l~~ 68 (185)
+.++++|+++++||++++.+|. .....+.+.++++++|++++|++|+..|++.... +.++ ++++.+
T Consensus 164 ~~a~~~g~~v~~Dp~~~~~~~~-~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~l~~ 242 (351)
T 2afb_A 164 KVANEKGVTVSCDLNYRARLWT-KEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKLNREAYAKIAEEVTR 242 (351)
T ss_dssp HHHHHHTCEEEEECCCCTTTCC-HHHHHHHHHHHGGGCSEEEECHHHHHHHHCCCCSCC-------CHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEeCCCchhcCC-hHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCcccccccccccchhhHHHHHHHHHH
Confidence 4678889999999999988886 4456778889999999999999999999987653 2222 235555
Q ss_pred C-CCcEEEEEcCCCce--------EEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHH
Q 029908 69 P-NLKLLLVTLGEHGC--------RYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFA 139 (185)
Q Consensus 69 ~-g~~~vvit~G~~G~--------~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a 139 (185)
. |++.|+||+|.+|+ +++++++.+++|+++++++|++||||+|+|+|+++|++|.+ +++|+++|
T Consensus 243 ~~g~~~vvvT~G~~G~~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~-------l~~a~~~A 315 (351)
T 2afb_A 243 KYNFKTVGITLRESISATVNYWSVMVFENGQPHFSNRYEIHIVDRVGAGDSFAGALIYGSLMGFD-------SQKKAEFA 315 (351)
T ss_dssp HHCCSEEEEEEEECSCSSEEEEEEEEEETTEEEECCCEEEECSCCTTHHHHHHHHHHHHHHHTCC-------HHHHHHHH
T ss_pred HcCCCEEEEEeCCcCccccccceeEEEeCCcEEEcCCCCCccCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHH
Confidence 3 99999999999975 67777778899999999999999999999999999999999 99999999
Q ss_pred HHHhHHHhhccCCCCCCCCHHHHHHHHhc
Q 029908 140 NACGALSTTKKGAIPALPTESEALALLKR 168 (185)
Q Consensus 140 ~~~aa~~~~~~g~~~~~~~~~~i~~~~~~ 168 (185)
+++|+.++++.|+.. +|+++++++++++
T Consensus 316 ~~~aa~~v~~~G~~~-~~~~~ev~~~l~~ 343 (351)
T 2afb_A 316 AAASCLKHTIPGDFV-VLSIEEIEKLASG 343 (351)
T ss_dssp HHHHHHHTTSSSSSC-CCCHHHHHHHHTC
T ss_pred HHHHHHHhCCCCCCC-CCCHHHHHHHHhc
Confidence 999999999999874 7999999999876
No 13
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=99.96 E-value=3.2e-28 Score=198.19 Aligned_cols=158 Identities=23% Similarity=0.322 Sum_probs=133.1
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEH 81 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~~ 81 (185)
+.+++++ .+++|++.++.+|.. .+.+.++++++|++++|++|++.|++.... .+.+..+.+.|++.|+||.|.+
T Consensus 160 ~~a~~~~-~~~~d~~~~~~~~~~----~~~~~~~l~~~dil~~N~~E~~~l~g~~~~-~~~~~~l~~~g~~~vvvt~G~~ 233 (325)
T 3h49_A 160 TQAKARQ-MIICADMIKPRLNET----LDDICEALSYVDYLFPNFAEAKLLTGKETL-DEIADCFLACGVKTVVIKTGKD 233 (325)
T ss_dssp HHHHHTT-CEEEEEECCCSSCCC----HHHHHHHHTTCSEEECBHHHHHHHHTCSSH-HHHHHHHHTTTCSEEEEECTTS
T ss_pred HHHHhcC-CEEEecCCchhhhhH----HHHHHHHHhhCCEEecCHHHHHHHhCCCCH-HHHHHHHHHcCCCEEEEEeCCC
Confidence 4677888 688888888877753 344677889999999999999999987642 2233467788999999999999
Q ss_pred ceEEEEcCceeEecCccc-ccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCCHH
Q 029908 82 GCRYYTKSFKGAVDAFRV-KTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPTES 160 (185)
Q Consensus 82 G~~~~~~~~~~~~~~~~~-~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~~~ 160 (185)
|++++++++.+++|++++ +++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.|+.+++|+++
T Consensus 234 G~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~ag~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ 306 (325)
T 3h49_A 234 GCFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKN-------LRECARFANATAAISVLSVGATTGVKNRK 306 (325)
T ss_dssp CEEEEETTEEEEECCCSSCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSSSSCSSSH
T ss_pred CeEEEECCeEEEecCcCCCCCcCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcccCCCCCCCCHH
Confidence 999999998899999886 8999999999999999999999999 99999999999999999999998899999
Q ss_pred HHHHHHhcCcch
Q 029908 161 EALALLKRSTII 172 (185)
Q Consensus 161 ~i~~~~~~~~~~ 172 (185)
+++++++++..+
T Consensus 307 ev~~~l~~~~~~ 318 (325)
T 3h49_A 307 LVEQLLEEYEGE 318 (325)
T ss_dssp HHHTC-------
T ss_pred HHHHHHHhccCC
Confidence 999999877643
No 14
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=99.95 E-value=3.7e-28 Score=197.22 Aligned_cols=152 Identities=24% Similarity=0.291 Sum_probs=133.2
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhc-cccEEEcCHHHHhHhhCCCCC-CHHHHHHhcCCCCcEEEEEcC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWD-KAEVIKVSDVELEFLTGSDKI-DDESALSLWHPNLKLLLVTLG 79 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~-~~dii~~n~~E~~~l~~~~~~-~~~~~~~l~~~g~~~vvit~G 79 (185)
+.++++|+++++||+. + .+.+.++ ++|++++|++|++.|++.... +.+.+.++.+. ++.|++|.|
T Consensus 157 ~~a~~~g~~v~~D~~~--------~----~l~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~-~~~vvvt~G 223 (320)
T 3ie7_A 157 RTVKATGAFLGCDNSG--------E----YLNLAVEMGVDFIKPNEDEVIAILDEKTNSLEENIRTLAEK-IPYLVVSLG 223 (320)
T ss_dssp HHHHHHTCEEEEECCH--------H----HHHHHHHHCCSEECCBTTGGGGGSCTTCCCHHHHHHHHTTT-CSEEEEECG
T ss_pred HHHHhcCCEEEEECCh--------H----HHHHHHhcCCeEEeeCHHHHHHHhCCCcCCCHHHHHHHHhh-CCEEEEEcC
Confidence 5678899999999972 2 3444554 999999999999999998765 34555555555 999999999
Q ss_pred CCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCCH
Q 029908 80 EHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPTE 159 (185)
Q Consensus 80 ~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~~ 159 (185)
++|++++++++.+++|+++++++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.|+ ..|++
T Consensus 224 ~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~-------~~~a~~~A~a~aa~~v~~~G~--~~~~~ 294 (320)
T 3ie7_A 224 AKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMNMP-------ITETLKVATGCSASKVMQQDS--SSFDL 294 (320)
T ss_dssp GGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSS--SCCCH
T ss_pred CCceEEEeCCcEEEEeCCccCCCCCcCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhCcCC--CCCCH
Confidence 999999999999999999999999999999999999999999999 999999999999999999994 67999
Q ss_pred HHHHHHHhcCcchhhh
Q 029908 160 SEALALLKRSTIIDKI 175 (185)
Q Consensus 160 ~~i~~~~~~~~~~~~~ 175 (185)
++++++++++.+++.+
T Consensus 295 ~ev~~~~~~~~i~~~~ 310 (320)
T 3ie7_A 295 EAAGKLKNQVSIIQLE 310 (320)
T ss_dssp HHHHHHGGGCEEEECC
T ss_pred HHHHHHhhCeEEEEcc
Confidence 9999999999986643
No 15
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=99.95 E-value=4.6e-28 Score=199.00 Aligned_cols=159 Identities=19% Similarity=0.279 Sum_probs=130.2
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHH---HhcC-----CCCcE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESAL---SLWH-----PNLKL 73 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~---~l~~-----~g~~~ 73 (185)
+.|+++|++|+|||++|+.+|+ .+..++.+.++++++|++++|++|+..+++......+... .... .+.+.
T Consensus 176 ~~ak~~g~~v~~D~n~r~~lw~-~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (351)
T 4gm6_A 176 REAKRNGIKISFDMNYRAKLWE-LEAAKRAYQQLLPLVDYCSAGQMDAVAFFEISSETTDYYQAMHDKYPNIELFYATKR 254 (351)
T ss_dssp HHHHHTTCEEEEECCCCTTTSC-HHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCTTCSCHHHHHHHHCTTCCEEEEEEE
T ss_pred HHHHHcCCCcccCCCcCchhhh-hhhHHHHHHHHHHhCCccccCHHHHHHHhCCCCchhHHHHHHHhhhhhhhhhhcccc
Confidence 6789999999999999999996 6677888999999999999999999999987654332222 1111 23344
Q ss_pred EEEEcCC--CceEEEEcCceeEecCccc-ccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhcc
Q 029908 74 LLVTLGE--HGCRYYTKSFKGAVDAFRV-KTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKK 150 (185)
Q Consensus 74 vvit~G~--~G~~~~~~~~~~~~~~~~~-~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~ 150 (185)
++++.+. .|..++..++.++.|++++ +++|||||||+|+|||+++|++|.+ +++|+++|+++|+++|++.
T Consensus 255 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~VvDttGAGDaF~ag~l~~l~~g~~-------~~~al~~A~aaaal~v~~~ 327 (351)
T 4gm6_A 255 TVISASHHLLQGHLWTQGECWESEEYAIYPIVDRVGGGDAYTAAVLHGILSEWR-------PDETVKFATAAAGLKHSIH 327 (351)
T ss_dssp EEEETTEEEEEEEEEETTEEEEEEEEEECSCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSS
T ss_pred ceeeeccCCceEEEEeCCceEEeCCCCCCCcCCCCChhHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHhCCC
Confidence 5555543 3567778888888887776 8999999999999999999999999 9999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHhcC
Q 029908 151 GAIPALPTESEALALLKRS 169 (185)
Q Consensus 151 g~~~~~~~~~~i~~~~~~~ 169 (185)
|+.+.+| .+++++++.+.
T Consensus 328 Ga~~~~~-~~ev~~~l~~~ 345 (351)
T 4gm6_A 328 GDINPFD-EKTIADFAADK 345 (351)
T ss_dssp SSSCCCC-HHHHHHHHHC-
T ss_pred CCCCCCC-HHHHHHHHhCC
Confidence 9988775 58999999754
No 16
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=99.95 E-value=2.3e-28 Score=197.05 Aligned_cols=152 Identities=24% Similarity=0.384 Sum_probs=132.0
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEH 81 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~~ 81 (185)
+.++++| ++++||+.+...|. .+.+.++++++|++++|++|+..|++....+.+ ++++. ++.|++|.|++
T Consensus 149 ~~a~~~g-~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~---~l~~~-~~~vvvt~G~~ 218 (302)
T 2c4e_A 149 KKAYGNN-LVSFDPGQDLPQYS-----KEMLLEIIEHTNFLFMNKHEFERASNLLNFEID---DYLER-VDALIVTKGSK 218 (302)
T ss_dssp HHHBTTB-EEEECCGGGGGGCC-----HHHHHHHHHTCSEEEEEHHHHHHHHHHHTCCHH---HHHTT-CSEEEEECGGG
T ss_pred HHHHhcC-CEEEeCchhhhhhh-----HHHHHHHHhcCCEEEcCHHHHHHHhCCCCccHH---HHHhc-CCEEEEEECCC
Confidence 4577789 99999996544443 455678899999999999999999876544332 56666 89999999999
Q ss_pred ceEEEEcCceeEecCcccc-cccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCCHH
Q 029908 82 GCRYYTKSFKGAVDAFRVK-TVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPTES 160 (185)
Q Consensus 82 G~~~~~~~~~~~~~~~~~~-~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~~~ 160 (185)
|++++++++.+++|+++++ ++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.|+...+|+++
T Consensus 219 G~~~~~~~~~~~~~~~~v~~~vdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~~~~~G~~~~~p~~~ 291 (302)
T 2c4e_A 219 GSVIYTKDKKIEIPCIKAGKVIDPTGAGDSYRAGFLSAYVKGYD-------LEKCGLIGAATASFVVEAKGCQTNLPTWD 291 (302)
T ss_dssp CEEEECSSCEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSSSSSTTCCCHH
T ss_pred ceEEEeCCcEEEeCCccCCcCCcCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHccccccccCCCHH
Confidence 9999988888999999998 999999999999999999999999 99999999999999999999988889999
Q ss_pred HHHHHHhcCc
Q 029908 161 EALALLKRST 170 (185)
Q Consensus 161 ~i~~~~~~~~ 170 (185)
++++++++..
T Consensus 292 ev~~~~~~~~ 301 (302)
T 2c4e_A 292 KVVERLEKHR 301 (302)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHhcC
Confidence 9999987653
No 17
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=99.95 E-value=7.6e-28 Score=196.48 Aligned_cols=145 Identities=27% Similarity=0.360 Sum_probs=131.3
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEH 81 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~~ 81 (185)
+.++++|++|++||++++.+|.+.+...+.+.++++++|++++|++|++.|++..+. .+.++++.+.|++.||||.|.+
T Consensus 172 ~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~-~~~~~~l~~~g~~~vvvt~G~~ 250 (328)
T 4e69_A 172 AQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAWFGDAGP-DATADRYARAGVRSVVVKNGPH 250 (328)
T ss_dssp HHHHHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBHHHHHHHHTCSSH-HHHHHHHHTTTCSEEEEBCTTS
T ss_pred HHHHhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCHHHHHHHcCCCCH-HHHHHHHHhcCCCEEEEEeCCC
Confidence 467889999999999998899877788889999999999999999999999987632 2334477788999999999999
Q ss_pred ceEEEEcCceeEecCcc-cccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCC
Q 029908 82 GCRYYTKSFKGAVDAFR-VKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIP 154 (185)
Q Consensus 82 G~~~~~~~~~~~~~~~~-~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~ 154 (185)
|++++++++.+++|+++ ++++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.|+.+
T Consensus 251 G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~-------l~~a~~~A~~~aa~~v~~~Ga~~ 317 (328)
T 4e69_A 251 AVHFLQDGRRGRVPVPPVAQVVDTTAAGDSFNAGLLDSVLAGQP-------LETAIAAAAALAGQVVQGKGALV 317 (328)
T ss_dssp CEEEEETTEEEEECCCCCCSCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSSC
T ss_pred CeEEEeCCceEEecCCCCCCccCCCChhHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHHccCCCcC
Confidence 99999999899999986 78999999999999999999999999 99999999999999999999874
No 18
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=99.95 E-value=8.9e-28 Score=194.20 Aligned_cols=148 Identities=25% Similarity=0.439 Sum_probs=132.6
Q ss_pred EEcCCCCCCCCCChHHHHHHHHHhhc--cccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCCCceEEEEcC
Q 029908 12 SYDPNLRLPLWPSPEEAREQIMSIWD--KAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYTKS 89 (185)
Q Consensus 12 ~~D~~~~~~~~~~~~~~~~~~~~~l~--~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~~G~~~~~~~ 89 (185)
++||+.+..+|+ .+...+.+.++++ ++|++++|++|++.|++.... .+.++++.+. ++.|++|+|++|+++++++
T Consensus 160 ~~D~~~~~~~~~-~~~~~~~~~~~l~~~~~dil~~N~~E~~~l~g~~~~-~~~~~~l~~~-~~~vvvt~G~~G~~~~~~~ 236 (311)
T 2dcn_A 160 SFDTNIRLKLWS-AEEAKREILKLLSKFHLKFLITDTDDSKIILGESDP-DKAAKAFSDY-AEIIVMKLGPKGAIVYYDG 236 (311)
T ss_dssp EEECCCCTTTSC-HHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHSCCCH-HHHHHHHTTT-EEEEEEEEETTEEEEEETT
T ss_pred CcCccCchhhCC-hHHHHHHHHHHHhhcCCcEEECCHHHHHHHhCCCCH-HHHHHHHHHh-CCEEEEEECCCCcEEEeCC
Confidence 899999988887 5666778889999 999999999999999986432 2334467777 8999999999999999988
Q ss_pred ceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCCHHHHHHHHhcC
Q 029908 90 FKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPTESEALALLKRS 169 (185)
Q Consensus 90 ~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~~~~i~~~~~~~ 169 (185)
+.+++|+++++++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.|+.+++|++++++++++++
T Consensus 237 ~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~v~~~~~~~ 309 (311)
T 2dcn_A 237 KKYYSSGYQVPVEDVTGAGDALGGTFLSLYYKGFE-------MEKALDYAIVASTLNVMIRGDQENLPTTKDIETFLREM 309 (311)
T ss_dssp EEEEEECCCCCCSCCTTHHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHTTSSSSSTTCCCHHHHHHHHHHC
T ss_pred cEEEeCCccccccCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Confidence 88899999999999999999999999999999999 99999999999999999999998889999999998764
No 19
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=99.95 E-value=7.8e-28 Score=196.49 Aligned_cols=150 Identities=19% Similarity=0.221 Sum_probs=130.4
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhc---cccEEEcCHHHHhHhhCCCCC-CHHH----HHHhcCCCCcE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWD---KAEVIKVSDVELEFLTGSDKI-DDES----ALSLWHPNLKL 73 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~---~~dii~~n~~E~~~l~~~~~~-~~~~----~~~l~~~g~~~ 73 (185)
+.++++|++|++||+. . .+.++++ ++|++++|++|+..|++.... +.++ +.++.+.|++.
T Consensus 171 ~~a~~~g~~v~~D~~~--------~----~l~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~l~~~g~~~ 238 (330)
T 2jg1_A 171 ERCQNKGVPVILDCSG--------A----TLQTVLENPYKPTVIKPNISELYQLLNQPLDESLESLKQAVSQPLFEGIEW 238 (330)
T ss_dssp HHHHTTTCCEEEECCH--------H----HHHHHHTSSSCCSEECCBHHHHHHHTTSCCCCCHHHHHHHHHSGGGTTCSE
T ss_pred HHHHHCCCEEEEECCc--------H----HHHHHHhccCCceEEEeCHHHHHHHhCCCCCCCHHHHHHHHHHHHHcCCCE
Confidence 5678899999999972 2 3456666 899999999999999987543 2222 23667789999
Q ss_pred EEEEcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCC
Q 029908 74 LLVTLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAI 153 (185)
Q Consensus 74 vvit~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~ 153 (185)
|++|+|++|++++++++.+++|+++++++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.|+.
T Consensus 239 VvvT~G~~Ga~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-------l~~al~~A~a~aa~~v~~~G~~ 311 (330)
T 2jg1_A 239 IIVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAILNHEN-------DHDLLKKANTLGMLNAQEAQTG 311 (330)
T ss_dssp EEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSS
T ss_pred EEEeecCCceEEEeCCCEEEEeCCCccccCCCcHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCcCCC
Confidence 999999999999998888899999999999999999999999999999999 9999999999999999999984
Q ss_pred CCCCCHHHHHHHHhcCcch
Q 029908 154 PALPTESEALALLKRSTII 172 (185)
Q Consensus 154 ~~~~~~~~i~~~~~~~~~~ 172 (185)
.|++++++++++++.++
T Consensus 312 --~~~~~ev~~~~~~i~~~ 328 (330)
T 2jg1_A 312 --YVNLNNYDDLFNQIEVL 328 (330)
T ss_dssp --CCCGGGHHHHHTTCEEE
T ss_pred --CCCHHHHHHHHhceEEE
Confidence 68999999999988764
No 20
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=99.95 E-value=1.8e-27 Score=192.24 Aligned_cols=151 Identities=32% Similarity=0.507 Sum_probs=132.0
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHH----HHHhcCCCCcEEEEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDES----ALSLWHPNLKLLLVT 77 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~----~~~l~~~g~~~vvit 77 (185)
+.++++|++|++||+++.. |. .++++++|++++|++|++.|++....+.++ ++++.+.|++.|++|
T Consensus 154 ~~a~~~g~~v~~D~~~~~~-~~---------~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt 223 (309)
T 1rkd_A 154 KIAHQNKTIVALNPAPARE-LP---------DELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLIT 223 (309)
T ss_dssp HHHHHTTCEEEECCCSCCC-CC---------HHHHTTCSEECCCHHHHHHHHSCCCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHcCCEEEEECCcccc-ch---------HHHHhhCCEEEcCHHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCEEEEE
Confidence 4678899999999987632 21 457889999999999999999876543322 236667899999999
Q ss_pred cCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCC
Q 029908 78 LGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALP 157 (185)
Q Consensus 78 ~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~ 157 (185)
.|++|++++++++.+++|+++++++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.|+.+.+|
T Consensus 224 ~G~~G~~~~~~~~~~~~~~~~v~~vdt~GAGD~f~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~~~~~G~~~~~p 296 (309)
T 1rkd_A 224 LGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKP-------LPEAIRFAHAAAAIAVTRKGAQPSVP 296 (309)
T ss_dssp CGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSGGGCC
T ss_pred ECCCcEEEEeCCceEEcCCCCCCcCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHcCCCCccCCCC
Confidence 99999999998888899999999999999999999999999999999 99999999999999999999987789
Q ss_pred CHHHHHHHHhcC
Q 029908 158 TESEALALLKRS 169 (185)
Q Consensus 158 ~~~~i~~~~~~~ 169 (185)
+++++++++++.
T Consensus 297 ~~~ev~~~~~~~ 308 (309)
T 1rkd_A 297 WREEIDAFLDRQ 308 (309)
T ss_dssp CHHHHHHHHHTC
T ss_pred CHHHHHHHHhcC
Confidence 999999998754
No 21
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=99.95 E-value=5.1e-28 Score=194.90 Aligned_cols=146 Identities=27% Similarity=0.458 Sum_probs=129.9
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHH----HHHhcCCCCcEEEEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDES----ALSLWHPNLKLLLVT 77 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~----~~~l~~~g~~~vvit 77 (185)
+.++++|++|++||+... +.+.++++++|++++|++|++.|++....+.++ ++++.+.|++.|++|
T Consensus 153 ~~a~~~~~~v~~D~~~~~----------~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt 222 (304)
T 3ry7_A 153 EIAKAHGVTTVLNPAPAK----------ALPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFLSIGIKTVLIT 222 (304)
T ss_dssp HHHHHTTCEEEEECCSCC----------CCCHHHHTTCSEECCBHHHHHHHHSCCCCSHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHcCCEEEEeCCccc----------cccHHHHHhCCEEecCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEE
Confidence 568889999999998642 134568899999999999999999987654333 236667899999999
Q ss_pred cCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHcc-CCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCC
Q 029908 78 LGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDD-QSAIEDEPRLREILKFANACGALSTTKKGAIPAL 156 (185)
Q Consensus 78 ~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g-~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~ 156 (185)
.|.+|++++++++.+++|+++++++|++||||+|+|+|+++|++| .+ +++|+++|+++|+.++++.|+.+++
T Consensus 223 ~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~~-------~~~a~~~A~~~aa~~~~~~G~~~~~ 295 (304)
T 3ry7_A 223 LGKQGTYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAFVSRLNKSQDN-------LADAIDFGNKASSLTVQKHGAQASI 295 (304)
T ss_dssp CGGGCEEEECSSCEEEECCSSCCSSCCSSHHHHHHHHHHHHCCTTCTT-------HHHHHHHHHHHHHTTSCCCCTGGGC
T ss_pred eCCCceEEEECCeeEEecCCCcccCCCCCchHHHHHHHHHHHHcCCCC-------HHHHHHHHHHHHHHHhCCCCccccC
Confidence 999999999999999999999999999999999999999999999 99 9999999999999999999999889
Q ss_pred CCHHHHHH
Q 029908 157 PTESEALA 164 (185)
Q Consensus 157 ~~~~~i~~ 164 (185)
|+++|+++
T Consensus 296 p~~~ev~~ 303 (304)
T 3ry7_A 296 PLLEEVNQ 303 (304)
T ss_dssp CCHHHHHT
T ss_pred CCHHHHhh
Confidence 99999975
No 22
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=99.95 E-value=5.2e-28 Score=197.27 Aligned_cols=153 Identities=26% Similarity=0.395 Sum_probs=132.1
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEH 81 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~~ 81 (185)
+.++++|++|++||+++..+|. .+.+.++++++|++++|++|+..|++....+.+. +.+ +++.|++|+|++
T Consensus 154 ~~a~~~g~~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~---l~~-~~~~vvvT~G~~ 224 (326)
T 3b1n_A 154 EELAQAGVPFIFDPGQGLPLFD-----GATLRRSIELATYIAVNDYEAKLVCDKTGWSEDE---IAS-RVQALIITRGEH 224 (326)
T ss_dssp HHHHHHTCCEEECCGGGGGGCC-----HHHHHHHHHHCSEEEEEHHHHHHHHHHHCCCHHH---HHT-TSSEEEEECGGG
T ss_pred HHHHHCCCEEEEeCchhhhhcc-----HHHHHHHHHhCCEEecCHHHHHHHhCCCCCCHHH---HHh-cCCEEEEecCCC
Confidence 5678889999999998776664 3456778899999999999999998754433333 333 388999999999
Q ss_pred ceEEEEcCceeEecCcccc-cccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCCHH
Q 029908 82 GCRYYTKSFKGAVDAFRVK-TVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPTES 160 (185)
Q Consensus 82 G~~~~~~~~~~~~~~~~~~-~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~~~ 160 (185)
|++++++++.+++|+++++ ++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.|+...+|+++
T Consensus 225 Ga~~~~~~~~~~~~~~~v~~vvDttGAGDaF~ag~l~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~~~~~ 297 (326)
T 3b1n_A 225 GATIRHRDGTEQIPAVRAERVIDPTGCGDAFRGGLLYGIEHGFD-------WATAGRLASLMGALKIAHQGPQTYAPTRA 297 (326)
T ss_dssp CEEEEETTEEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSTTCCCCCHH
T ss_pred ceEEEECCcEEEeCCCCCCCCCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 9999998888899999986 789999999999999999999999 99999999999999999999988889999
Q ss_pred HHHHHHhcCc
Q 029908 161 EALALLKRST 170 (185)
Q Consensus 161 ~i~~~~~~~~ 170 (185)
++++++++..
T Consensus 298 ev~~~l~~~~ 307 (326)
T 3b1n_A 298 EIDARFETAF 307 (326)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999987643
No 23
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=99.95 E-value=6.5e-28 Score=197.24 Aligned_cols=156 Identities=19% Similarity=0.200 Sum_probs=135.1
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEH 81 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~~ 81 (185)
+.++++|+++++||+++..+|. .+.+.++++++|++++|++|++.|++....+.+ .+.+. ++.|++|.|++
T Consensus 167 ~~a~~~g~~v~~D~~~~~~~~~-----~~~l~~~l~~~dil~~N~~E~~~l~g~~~~~~~---~l~~~-~~~vvvt~G~~ 237 (334)
T 2pkf_A 167 EECRKLGLAFAADPSQQLARLS-----GEEIRRLVNGAAYLFTNDYEWDLLLSKTGWSEA---DVMAQ-IDLRVTTLGPK 237 (334)
T ss_dssp HHHHHHTCCEEEECGGGGGTSC-----HHHHHTTTTTCSEEEEEHHHHHHHHHHHCCCHH---HHHTT-CSCEEEECGGG
T ss_pred HHHHhcCCeEEEeccchhhhhh-----HHHHHHHHhcCCEEecCHHHHHHHhccCCCCHH---HHHhc-CCEEEEEeCCC
Confidence 4678889999999998877774 345678999999999999999999875443333 23333 88999999999
Q ss_pred ceEEEEcCc-eeEecCcccc-cccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCCH
Q 029908 82 GCRYYTKSF-KGAVDAFRVK-TVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPTE 159 (185)
Q Consensus 82 G~~~~~~~~-~~~~~~~~~~-~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~~ 159 (185)
|++++++++ .+++|+++++ ++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.|+.+.+|++
T Consensus 238 G~~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~ 310 (334)
T 2pkf_A 238 GVDLVEPDGTTIHVGVVPETSQTDPTGVGDAFRAGFLTGRSAGLG-------LERSAQLGSLVAVLVLESTGTQEWQWDY 310 (334)
T ss_dssp CEEEECTTSCEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSSCCCCCH
T ss_pred CeEEEeCCCcEEEeCCcCCCCCCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhCCCCCcCCCCH
Confidence 999998877 8899999986 789999999999999999999999 9999999999999999999999889999
Q ss_pred HHHHHHHhcCcchh
Q 029908 160 SEALALLKRSTIID 173 (185)
Q Consensus 160 ~~i~~~~~~~~~~~ 173 (185)
+++++++++...++
T Consensus 311 ~ev~~~l~~~~~~~ 324 (334)
T 2pkf_A 311 EAAASRLAGAYGEH 324 (334)
T ss_dssp HHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHhHh
Confidence 99999998876554
No 24
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=99.95 E-value=2.6e-27 Score=191.11 Aligned_cols=149 Identities=23% Similarity=0.272 Sum_probs=130.3
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhc-cccEEEcCHHHHhHhhCCCCCCHHH----HHHhcCCCCcEEEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWD-KAEVIKVSDVELEFLTGSDKIDDES----ALSLWHPNLKLLLV 76 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~-~~dii~~n~~E~~~l~~~~~~~~~~----~~~l~~~g~~~vvi 76 (185)
+.++++|+++++||+. +.+.++++ ++|++++|.+|+..|++....+.++ ++++.+.|++.|++
T Consensus 149 ~~a~~~g~~v~~D~~~------------~~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvv 216 (306)
T 2abq_A 149 QIAKERGAFVAVDTSG------------EALHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQRLIGEGIESILV 216 (306)
T ss_dssp HHHHTTTCEEEEECCH------------HHHHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHhcCCEEEEECCh------------HHHHHHHhcCCcEEecCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 5678899999999972 24567888 9999999999999999876544332 23666789999999
Q ss_pred EcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCC
Q 029908 77 TLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPAL 156 (185)
Q Consensus 77 t~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~ 156 (185)
|+|++|++++++++.+++|+++++++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++. ++
T Consensus 217 t~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g~~-------~~~a~~~A~a~aa~~v~~~----~~ 285 (306)
T 2abq_A 217 SFAGDGALFASAEGMFHVNVPSGEVRNSVGAGDSVVAGFLAALQEGKS-------LEDAVPFAVAAGSATAFSD----GF 285 (306)
T ss_dssp ECGGGCEEEEETTEEEEECCCCCCCCCCSSHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHSS----SC
T ss_pred ecCCCceEEEeCCCEEEEeCCCccccCCccHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCc----CC
Confidence 999999999988888899999999999999999999999999999999 9999999999999999998 46
Q ss_pred CCHHHHHHHHhcCcchh
Q 029908 157 PTESEALALLKRSTIID 173 (185)
Q Consensus 157 ~~~~~i~~~~~~~~~~~ 173 (185)
|++++++++++++.++.
T Consensus 286 p~~~ev~~~~~~~~~~~ 302 (306)
T 2abq_A 286 CTREEVERLQQQLQRTI 302 (306)
T ss_dssp CCHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHhhEEEEe
Confidence 89999999998877644
No 25
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=99.95 E-value=2.7e-27 Score=190.81 Aligned_cols=149 Identities=24% Similarity=0.293 Sum_probs=129.7
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhc-cccEEEcCHHHHhHhhCCCCCCHHH----HHHhcCCCCcEEEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWD-KAEVIKVSDVELEFLTGSDKIDDES----ALSLWHPNLKLLLV 76 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~-~~dii~~n~~E~~~l~~~~~~~~~~----~~~l~~~g~~~vvi 76 (185)
+.++++|+++++||+. ..+.++++ ++|++++|++|++.|++....+.++ ++++.+.|++.|++
T Consensus 149 ~~a~~~g~~v~~D~~~------------~~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvv 216 (306)
T 2jg5_A 149 QITAQTGAKLVVDAEK------------ELAESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLLVDKGAQSVIV 216 (306)
T ss_dssp HHHHHHCCEEEEECCH------------HHHHHHGGGCCSEECCBHHHHHHHTTSCCCSHHHHHHHHHHHHHTTCSCEEE
T ss_pred HHHHHCCCEEEEECCh------------HHHHHHHhcCCeEEecCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 5678889999999972 23556777 6999999999999999876544332 23566789999999
Q ss_pred EcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCC
Q 029908 77 TLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPAL 156 (185)
Q Consensus 77 t~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~ 156 (185)
|+|++|++++++++.+++|+++++++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.| +
T Consensus 217 t~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~a~aa~~v~~~G----~ 285 (306)
T 2jg5_A 217 SLGGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAGIASGLS-------IEKAFQQAVACGTATAFDED----L 285 (306)
T ss_dssp ECGGGCEEEECSSEEEEEECCCCCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSS----S
T ss_pred ccCCCceEEEeCCcEEEEeCCcccccCCcChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCC----C
Confidence 999999999988888899999999999999999999999999999999 99999999999999999999 5
Q ss_pred CCHHHHHHHHhcCcchh
Q 029908 157 PTESEALALLKRSTIID 173 (185)
Q Consensus 157 ~~~~~i~~~~~~~~~~~ 173 (185)
|++++++++++++.+++
T Consensus 286 ~~~~ev~~~~~~~~~~~ 302 (306)
T 2jg5_A 286 ATRDAIEKIKSQVTISV 302 (306)
T ss_dssp CCHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHhceEEEE
Confidence 89999999999887654
No 26
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=99.95 E-value=8.1e-28 Score=193.84 Aligned_cols=140 Identities=24% Similarity=0.392 Sum_probs=125.4
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEH 81 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~~ 81 (185)
+.++++|++|++||+.+. +.+.++++++|++++|++|++.|++ .|++.|++|.|++
T Consensus 151 ~~a~~~g~~v~~D~~~~~----------~~~~~ll~~~dil~~N~~E~~~l~g--------------~g~~~vvvt~G~~ 206 (299)
T 3ikh_A 151 QYARSRGMTTVFNPSPVN----------PDFCHLWPLIDIAVVNESEAELLQP--------------YGVKTLVITQGAA 206 (299)
T ss_dssp HHHHHTTCEEEECCCSCC----------GGGGGCGGGCSEEEEEHHHHHHHCC--------------CSCSEEEEECGGG
T ss_pred HHHHHcCCEEEEccccch----------hhHHHHHhhCCEEEecHHHHHHHhc--------------CCCCEEEEEECCC
Confidence 567889999999998642 3456789999999999999999987 5888999999999
Q ss_pred ceEEEEcCceeEecCcccccccCCCcchHHHH-HHHHHHHccCCCCCChHHHHH-HHHHHHHHhHHHhhccCCCCCCCCH
Q 029908 82 GCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVG-ALLCKIVDDQSAIEDEPRLRE-ILKFANACGALSTTKKGAIPALPTE 159 (185)
Q Consensus 82 G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A-~~~~~l~~g~~~~~~~~~~~~-a~~~a~~~aa~~~~~~g~~~~~~~~ 159 (185)
|++++++++.+++|+++++++|++||||+|+| +|+++|++|.+ +++ |+++|+++|+.++++.|+.+++|++
T Consensus 207 G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~~~~~l~~g~~-------~~~~a~~~a~~~aa~~v~~~G~~~~~p~~ 279 (299)
T 3ikh_A 207 GAWLVQEGQRQFCPAVPAEALDTTGAGDTFLAVMLASALLRGVA-------PDALALAHASRAAAITVSRRGTLSAFPGS 279 (299)
T ss_dssp CEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHTTSS-------SCHHHHHHHHHHHHHHHHSSSSTTTSCCH
T ss_pred ceEEEeCCceEEeCCCCCccCCCCCchHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhCCCcccccCCCH
Confidence 99999988999999999999999999999999 99999999999 999 9999999999999999999889999
Q ss_pred HHHHHHHhcCcch
Q 029908 160 SEALALLKRSTII 172 (185)
Q Consensus 160 ~~i~~~~~~~~~~ 172 (185)
+++++++++...+
T Consensus 280 ~ev~~~l~~~~~~ 292 (299)
T 3ikh_A 280 RELAALLTTDGAE 292 (299)
T ss_dssp HHHHHHHC-----
T ss_pred HHHHHHHHhcccc
Confidence 9999999877653
No 27
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=1.4e-27 Score=193.80 Aligned_cols=154 Identities=18% Similarity=0.159 Sum_probs=129.6
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCH-HHHHHhcCCCCcEEEEEcCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDD-ESALSLWHPNLKLLLVTLGE 80 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~-~~~~~l~~~g~~~vvit~G~ 80 (185)
+.++++|++|++||+. ....+.+.++++++|++++|++|++.|++....+. +.++++.+.|++.|++|.|+
T Consensus 154 ~~a~~~g~~v~~Dp~~--------~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~l~~~g~~~vvvt~G~ 225 (317)
T 2nwh_A 154 LIARACEKPLAAIAIS--------PAKAVKLKAALGDIDILFMNEAEARALTGETAENVRDWPNILRKAGLSGGVVTRGA 225 (317)
T ss_dssp HHHHHTTCCEEEECCS--------HHHHGGGTTTGGGCSEEEEEHHHHHHHHC-----CTTHHHHHHHTTCCCEEEEETT
T ss_pred HHHHhcCCeEEEeCCC--------HHHHHHHHHHhhhCeEecCCHHHHHHHhCCChhHHHHHHHHHHHcCCCEEEEEECC
Confidence 5678889999999973 12234566789999999999999999998622211 23346667899999999999
Q ss_pred CceEEEEcCc-eeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCCH
Q 029908 81 HGCRYYTKSF-KGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPTE 159 (185)
Q Consensus 81 ~G~~~~~~~~-~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~~ 159 (185)
+|++++++++ .+++|+++++++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.|+.+.+|++
T Consensus 226 ~G~~~~~~~~~~~~~~~~~v~~vdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~~~~ 298 (317)
T 2nwh_A 226 SEVVAFNGTEKAILHPPLIREVKDVTGAGDAMASGYLAAIAEGKT-------IREALRQGAAAAAITVQSSFATSQDLSK 298 (317)
T ss_dssp TEEEEECSSCEEEECCCCSSSCSCCCCSSHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHSSTTCCGGGCCH
T ss_pred CcEEEEcCCCceEEeCCCCccccCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 9999987664 6889999999999999999999999999999999 9999999999999999999999878999
Q ss_pred HHHHHHHhcCc
Q 029908 160 SEALALLKRST 170 (185)
Q Consensus 160 ~~i~~~~~~~~ 170 (185)
+++++.++..+
T Consensus 299 ~~v~~~~~~~~ 309 (317)
T 2nwh_A 299 DSVEAMLGLVP 309 (317)
T ss_dssp HHHHHHHTTSC
T ss_pred HHHHhHhhhhc
Confidence 99999887654
No 28
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=99.95 E-value=3.8e-27 Score=190.30 Aligned_cols=147 Identities=25% Similarity=0.327 Sum_probs=128.8
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhcc--ccEEEcCHHHHhHhhCCCCCCHHH----HHHhcCCCC-cEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDK--AEVIKVSDVELEFLTGSDKIDDES----ALSLWHPNL-KLL 74 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~--~dii~~n~~E~~~l~~~~~~~~~~----~~~l~~~g~-~~v 74 (185)
+.++++|+++++||+ .+.+.+++++ +|++++|++|++.|++....+.++ ++++.+.|. +.|
T Consensus 154 ~~a~~~~~~v~~D~~------------~~~l~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~~v 221 (309)
T 3umo_A 154 SAAQKQGIRCIVDSS------------GEALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKAKRV 221 (309)
T ss_dssp HHHHHTTCEEEEECC------------HHHHHHHTSSCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHHHTTSBSCE
T ss_pred HHHHhcCCEEEEECC------------cHHHHHHhccCCCeEEEeCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCcEE
Confidence 567889999999996 2346677887 499999999999999876433222 236667786 899
Q ss_pred EEEcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCC
Q 029908 75 LVTLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIP 154 (185)
Q Consensus 75 vit~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~ 154 (185)
++|.|++|++++++++.+++|+++++++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.|+.
T Consensus 222 vvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGD~f~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~- 293 (309)
T 3umo_A 222 VVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENAS-------LEEMVRFGVAAGSAATLNQGTR- 293 (309)
T ss_dssp EEECGGGCEEEECSSCEEEECCCSCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSSTTC-
T ss_pred EEEcCcccEEEEECCcEEEEeCCCcCCCCCcChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCCC-
Confidence 99999999999999999999999999999999999999999999999999 9999999999999999999985
Q ss_pred CCCCHHHHHHHHhcC
Q 029908 155 ALPTESEALALLKRS 169 (185)
Q Consensus 155 ~~~~~~~i~~~~~~~ 169 (185)
.|++++++++++++
T Consensus 294 -~~~~~ev~~~l~~~ 307 (309)
T 3umo_A 294 -LCSHDDTQKIYAYL 307 (309)
T ss_dssp -CCCHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHh
Confidence 69999999998764
No 29
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=99.95 E-value=3.8e-27 Score=191.34 Aligned_cols=145 Identities=21% Similarity=0.307 Sum_probs=129.4
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEH 81 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~~ 81 (185)
+.++++|++|++||++++.+|.+.+...+.+.++++++|++++|.+|++.|++.... .+.++++.+.|++.||||.|.+
T Consensus 156 ~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~di~~~n~~E~~~l~g~~~~-~~~~~~l~~~g~~~vvvt~G~~ 234 (319)
T 3lhx_A 156 RECRAKGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQQPV-EDVIARTHNAGVKEVVVKRGAD 234 (319)
T ss_dssp HHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEEEHHHHHHHHCCCCH-HHHHHHHHHTTCSEEEEEETTE
T ss_pred HHHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHHhhCCcccCCHHHHHHHhCCCCH-HHHHHHHHhcCCCEEEEEECCC
Confidence 567889999999999998899887888889999999999999999999999987532 2334467778999999999999
Q ss_pred ceEEEEcCcee-EecCc---ccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCC
Q 029908 82 GCRYYTKSFKG-AVDAF---RVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIP 154 (185)
Q Consensus 82 G~~~~~~~~~~-~~~~~---~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~ 154 (185)
|++++++++.+ ++|++ +++++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.|+.+
T Consensus 235 G~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~Ga~~ 304 (319)
T 3lhx_A 235 SCLVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGS-------AENAAKRGHLTASTVIQYRGAII 304 (319)
T ss_dssp EEEEEETTSCCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHTTSSSSSC
T ss_pred CeEEEECCcceEEcccccCCCCccCCCCCccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHhhhccCCCcC
Confidence 99999987665 88886 568999999999999999999999999 99999999999999999999874
No 30
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=99.95 E-value=5.4e-27 Score=190.83 Aligned_cols=151 Identities=18% Similarity=0.207 Sum_probs=129.9
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhh---ccccEEEcCHHHHhHhhCCCCC-CH-H----HHHHhcCCCCc
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIW---DKAEVIKVSDVELEFLTGSDKI-DD-E----SALSLWHPNLK 72 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l---~~~dii~~n~~E~~~l~~~~~~-~~-~----~~~~l~~~g~~ 72 (185)
+.++++|+++++||+. .. +.+++ +++|++++|++|++.|++.... +. + .+.++.+.|++
T Consensus 153 ~~a~~~g~~v~~Dp~~--------~~----~~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~l~~~g~~ 220 (323)
T 2f02_A 153 QKAHAQEVKVLLDTSG--------DS----LRQVLQGPWKPYLIKPNLEELEGLLGQDFSENPLAAVQTALTKPMFAGIE 220 (323)
T ss_dssp HHHHHTTCEEEEECCT--------HH----HHHHHHSSCCCSEECCBHHHHHHHHTCCCCSSCHHHHHHHHTSGGGTTCS
T ss_pred HHHHHCCCEEEEECCh--------HH----HHHHHhccCCCeEEecCHHHHHHHhCCCCCCCcHHHHHHHHHHHHHcCCC
Confidence 5678899999999973 22 34445 5999999999999999987632 11 1 22366678999
Q ss_pred EEEEEcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCC
Q 029908 73 LLLVTLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGA 152 (185)
Q Consensus 73 ~vvit~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~ 152 (185)
.|++|.|++|++++++++.+++|+++++++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.|+
T Consensus 221 ~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~ 293 (323)
T 2f02_A 221 WIVISLGKDGAIAKHHDQFYRVKIPTIQAKNPVGSGDATIAGLAYGLAKDAP-------AAELLKWGMAAGMANAQERMT 293 (323)
T ss_dssp EEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHSSSS
T ss_pred EEEEeecCCceEEEeCCCEEEEcCCCccccCCccHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCc
Confidence 9999999999999988888899999999999999999999999999999999 999999999999999999998
Q ss_pred CCCCCCHHHHHHHHhcCcchh
Q 029908 153 IPALPTESEALALLKRSTIID 173 (185)
Q Consensus 153 ~~~~~~~~~i~~~~~~~~~~~ 173 (185)
. +|++++++++++++.+++
T Consensus 294 ~--~~~~~ev~~~~~~~~v~~ 312 (323)
T 2f02_A 294 G--HVDVENVKKHLMNIQVVE 312 (323)
T ss_dssp S--CCCHHHHHHHHTTCEEEE
T ss_pred C--CCCHHHHHHHhhcEEEEE
Confidence 4 689999999999887654
No 31
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=99.95 E-value=2.6e-27 Score=191.86 Aligned_cols=151 Identities=36% Similarity=0.517 Sum_probs=133.0
Q ss_pred hHHHHcCCeEEEcCCCCCCCCC-ChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWP-SPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGE 80 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~-~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~ 80 (185)
+.++ .+++|++||+.++.+|. +.+.+.+.+.++++++|++++|++|++.|.+.... ..+.+.|+||+|+
T Consensus 149 ~~a~-~~~~v~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~~l~~~~~~---------~~~~~~vviT~G~ 218 (313)
T 3ewm_A 149 KKIK-GSSLIAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLENQGVE---------VKGSMLTAITLGP 218 (313)
T ss_dssp HHHB-TTBEEEEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHHHHHTTTCC---------CCCSSEEEEECGG
T ss_pred HHhc-cCCEEEEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhccCcc---------ccCceEEEEEECC
Confidence 3455 47999999999988887 46677888899999999999999999999875432 1356668999999
Q ss_pred CceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHH--ccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCC
Q 029908 81 HGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIV--DDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPT 158 (185)
Q Consensus 81 ~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~--~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~ 158 (185)
+|++++++++.+++|+++++++|++||||+|+|+|+++|+ +|.+ +++|+++|+++|+.++++.|+.. +|+
T Consensus 219 ~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~~~~l~~~~g~~-------l~~a~~~A~~~aa~~v~~~G~~~-~p~ 290 (313)
T 3ewm_A 219 KGCRLIKNETVVDVPSYNVNPLDTTGAGDAFMAALLVGILKLKGLD-------LLKLGKFANLVAALSTQKRGAWS-TPR 290 (313)
T ss_dssp GEEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHHSSSCC-------HHHHHHHHHHHHHHHTTSCSSCC-CCC
T ss_pred CCeEEEECCeeEEcCCCCcccCCCCCchHHHHHHHHHHHHhcCCCC-------HHHHHHHHHHHHHHHHccCCCCC-CCC
Confidence 9999999999999999999999999999999999999999 9999 99999999999999999999974 899
Q ss_pred HHHHHHHHhcCc
Q 029908 159 ESEALALLKRST 170 (185)
Q Consensus 159 ~~~i~~~~~~~~ 170 (185)
+++++++++...
T Consensus 291 ~~ev~~~l~~~~ 302 (313)
T 3ewm_A 291 KDELLKYKEARE 302 (313)
T ss_dssp HHHHTTSHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999998887554
No 32
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=99.95 E-value=2.8e-27 Score=191.83 Aligned_cols=140 Identities=27% Similarity=0.297 Sum_probs=127.2
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEH 81 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~~ 81 (185)
+.++++|++|++||+++.. ..+.+.++++++|++++|++|++.|++. ++.|++|.|++
T Consensus 163 ~~a~~~g~~v~~D~~~~~~-------~~~~~~~ll~~~dil~~N~~Ea~~l~g~---------------~~~vvvt~G~~ 220 (310)
T 3go6_A 163 RAAQSADAVVMVNASPAGQ-------DRSSLQDLAAIADVVIANEHEANDWPSP---------------PTHFVITLGVR 220 (310)
T ss_dssp HHHHHTTCEEEEECCSSSC-------CHHHHHHHHHHCSEEEEEHHHHHHSSSC---------------CSEEEEECGGG
T ss_pred HHHHHcCCEEEEcCCcccc-------chHHHHHHHhhCCEEEeCHHHHHHHhCC---------------CCEEEEEECCC
Confidence 5678899999999986542 2566778899999999999999999864 67899999999
Q ss_pred ceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHc----cCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCC
Q 029908 82 GCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVD----DQSAIEDEPRLREILKFANACGALSTTKKGAIPALP 157 (185)
Q Consensus 82 G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~----g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~ 157 (185)
|++++++++.+++|+++++++|++||||+|+|+|+++|++ |.+ +++|+++|+++|+.++++.|+.+++|
T Consensus 221 Ga~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~~~~~g~~-------l~~a~~~A~~~aa~~v~~~G~~~~~p 293 (310)
T 3go6_A 221 GARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAE-------RLRALRRACAAGALATLVSGVGDCAP 293 (310)
T ss_dssp CEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHCCSSSCCHHH-------HHHHHHHHHHHHHHHTTSSCSTTCCC
T ss_pred CEEEEECCceEEeCCCCCCcCcCCCchHHHHHHHHHHHHhcccCCCC-------HHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999 888 99999999999999999999998899
Q ss_pred CHHHHHHHHhcCc
Q 029908 158 TESEALALLKRST 170 (185)
Q Consensus 158 ~~~~i~~~~~~~~ 170 (185)
+++|+++++++.+
T Consensus 294 ~~~ev~~~l~~~~ 306 (310)
T 3go6_A 294 AAAAIDAALRANR 306 (310)
T ss_dssp CHHHHHHHHHTC-
T ss_pred CHHHHHHHHHhcc
Confidence 9999999997654
No 33
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=1.9e-27 Score=195.38 Aligned_cols=152 Identities=21% Similarity=0.269 Sum_probs=132.3
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHH-hhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCC-cEEEEEcC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMS-IWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNL-KLLLVTLG 79 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~-~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~-~~vvit~G 79 (185)
+.++++|++|++||... .+.+.+ +++++|++++|++|++.|++..+. .+.++++.+.|+ +.||||.|
T Consensus 176 ~~a~~~g~~v~~Dp~~~----------~~~~~~~ll~~~dil~~N~~Ea~~l~g~~~~-~~~~~~l~~~g~~~~VvvT~G 244 (343)
T 2rbc_A 176 TVARALGKPAILDGDVA----------PVETLEGLAPAATHIVFSEPAATRLTGLETV-KDMLPVLHARYPQTFIAVTAG 244 (343)
T ss_dssp HHHHHTTCCEEEEECSC----------CHHHHHHHGGGCSEEEEEHHHHHHHHCCSSH-HHHHHHHHHHSTTSEEEEECG
T ss_pred HHHHHCCCEEEEECCcc----------ccccHHHHHhcCCEEEeCHHHHHHHcCCCCH-HHHHHHHHHhCCCceEEEEEC
Confidence 56788999999999641 235566 899999999999999999987532 223346667788 99999999
Q ss_pred CCceEEEEcC--ceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCC
Q 029908 80 EHGCRYYTKS--FKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALP 157 (185)
Q Consensus 80 ~~G~~~~~~~--~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~ 157 (185)
.+|+++++++ +.+++|+++++++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.|+.+.+|
T Consensus 245 ~~G~~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p 317 (343)
T 2rbc_A 245 PAGCWWTEADDPTVHFQTTMQVEAVDTLAAGDIFHGTFALAMAEGMQ-------SRAAVRLSSVAAALKCTVFGGRIGAP 317 (343)
T ss_dssp GGCEEEECTTCCCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSGGGGCC
T ss_pred CcceEEEeCCCceeEEecCCCCccccCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhCCCCCccCCC
Confidence 9999999877 78899999999999999999999999999999999 99999999999999999999987789
Q ss_pred CHHHHHHHHhcCcc
Q 029908 158 TESEALALLKRSTI 171 (185)
Q Consensus 158 ~~~~i~~~~~~~~~ 171 (185)
+++++++++++..+
T Consensus 318 ~~~ev~~~l~~~~~ 331 (343)
T 2rbc_A 318 TREETEEAMRQWLE 331 (343)
T ss_dssp CHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhccc
Confidence 99999999987543
No 34
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.94 E-value=2.8e-27 Score=191.77 Aligned_cols=149 Identities=28% Similarity=0.403 Sum_probs=129.1
Q ss_pred HHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCC---CCCH-HHHHHhcCCCCcEEEEEc
Q 029908 3 AAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSD---KIDD-ESALSLWHPNLKLLLVTL 78 (185)
Q Consensus 3 ~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~---~~~~-~~~~~l~~~g~~~vvit~ 78 (185)
.++++|+++++||+++. +.+.++++++|++++|++|++.|++.. ..+. +.++++.+.|++.|++|.
T Consensus 158 ~a~~~~~~v~~Dp~~~~----------~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvT~ 227 (311)
T 1vm7_A 158 CAKRFNGIVIFDPAPAQ----------GINEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFLELGVKNVIVKL 227 (311)
T ss_dssp HHHHCCSEEEECCCSCT----------TCCGGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHcCCEEEEeCcchh----------hhhHHHHhhCCEEeCCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEEE
Confidence 36888999999998642 123568899999999999999998742 1222 233467778999999999
Q ss_pred CCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCC
Q 029908 79 GEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPT 158 (185)
Q Consensus 79 G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~ 158 (185)
|.+|++++++++.+++|+++++++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.|+.+.+|+
T Consensus 228 G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~ 300 (311)
T 1vm7_A 228 GDKGVLLVNKNEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSEGKN-------PEEAVIFGTAAAAISVTRLGAQSSIPA 300 (311)
T ss_dssp GGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSSSSGGGCCC
T ss_pred CCCCeEEEeCCceEEecCCCcccCCCCccHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHhCcCCccccCCC
Confidence 9999999988888899999999999999999999999999999999 999999999999999999999878899
Q ss_pred HHHHHHHHhc
Q 029908 159 ESEALALLKR 168 (185)
Q Consensus 159 ~~~i~~~~~~ 168 (185)
++++++++++
T Consensus 301 ~~ev~~~l~~ 310 (311)
T 1vm7_A 301 REEVEAFLKN 310 (311)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999998764
No 35
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=99.94 E-value=7.7e-27 Score=190.56 Aligned_cols=147 Identities=27% Similarity=0.396 Sum_probs=127.1
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHH----HHHhcCCCCcEEEEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDES----ALSLWHPNLKLLLVT 77 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~----~~~l~~~g~~~vvit 77 (185)
+.++++|++|++||+++...|. .++++++|++++|++|++.|++....+.++ ++++.+.|++.|++|
T Consensus 174 ~~a~~~g~~v~~Dp~~~~~~~~---------~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~g~~~VvvT 244 (331)
T 2fv7_A 174 TMARRSGVKTLFNPAPAIADLD---------PQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQVVIIT 244 (331)
T ss_dssp HHHHHTTCEEEECCCSCCTTCC---------THHHHTCSEEEEEHHHHHHHHSSCCCSHHHHHHHHHHHHTTTCSEEEEE
T ss_pred HHHHHcCCEEEEeCCcccccch---------HHHHhcCCEEEeCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEE
Confidence 4678899999999997643332 357889999999999999999876443322 236777899999999
Q ss_pred cCCCceEEEEcC--ceeEecCcccccccCCCcchHHHHHHHHHHHcc--CCCCCChHHHHHHHHHHHHHhHHHhhccCCC
Q 029908 78 LGEHGCRYYTKS--FKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDD--QSAIEDEPRLREILKFANACGALSTTKKGAI 153 (185)
Q Consensus 78 ~G~~G~~~~~~~--~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g--~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~ 153 (185)
.|.+|+++++++ +.+++|+++++++|++||||+|+|+|+++|++| .+ +++|+++|+++|+.++++.|+.
T Consensus 245 ~G~~G~~~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~-------~~~a~~~A~~~aa~~v~~~G~~ 317 (331)
T 2fv7_A 245 LGAEGCVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAYYPNLS-------LEDMLNRSNFIAAVSVQAAGTQ 317 (331)
T ss_dssp CGGGCEEEEESSCCSCEEECCCCCCCSCCTTHHHHHHHHHHHHHHHCTTSC-------HHHHHHHHHHHHHHHHTSSSGG
T ss_pred ECCCceEEEECCCCceeEecCCCCccCCCCCchHHHHHHHHHHHHhCCCCC-------HHHHHHHHHHHHHHHhCCCCCc
Confidence 999999998877 788999999999999999999999999999999 99 9999999999999999999998
Q ss_pred CCCCCHHHHHH
Q 029908 154 PALPTESEALA 164 (185)
Q Consensus 154 ~~~~~~~~i~~ 164 (185)
+.+|+++++++
T Consensus 318 ~~~p~~~ev~~ 328 (331)
T 2fv7_A 318 SSYPYKKDLPL 328 (331)
T ss_dssp GGCCCGGGSCG
T ss_pred cCCCCHHHHhh
Confidence 78899888754
No 36
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.94 E-value=1.5e-26 Score=185.63 Aligned_cols=143 Identities=30% Similarity=0.464 Sum_probs=121.9
Q ss_pred HHHH-cCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCC---CCCHHH-HHHhcC-CCCcEEEE
Q 029908 3 AAKE-AGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSD---KIDDES-ALSLWH-PNLKLLLV 76 (185)
Q Consensus 3 ~a~~-~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~---~~~~~~-~~~l~~-~g~~~vvi 76 (185)
.+++ +|+++++||+++++.|. .+.+.++++++|++++|++|++.|++.. ..+.+. ++++.+ .|++.|++
T Consensus 140 ~a~~~~~~~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~~g~~~vvv 214 (296)
T 2qhp_A 140 TMPDIDGQLKIFDINLRQDFYT-----KEVLRESFKRCNILKINDEELVTISRMFGYPGIDLQDKCWILLAKYNLKMLIL 214 (296)
T ss_dssp HSCCTTSCEEEEECCCCTTCCC-----HHHHHHHHHHCSEEEEEHHHHHHHHHHTTCTTSCHHHHHHHHHHHTTCSEEEE
T ss_pred HHHhcCCCEEEEECcCCccccC-----HHHHHHHHHHCCEEECCHHHHHHHhcccCCCCCCHHHHHHHHHHhcCCCEEEE
Confidence 3444 58999999999887775 3466778899999999999999998742 223333 335555 49999999
Q ss_pred EcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCC
Q 029908 77 TLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPAL 156 (185)
Q Consensus 77 t~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~ 156 (185)
|.|++|++++++++.+++|+++++++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.|+.+.+
T Consensus 215 t~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGD~f~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~~G~~~~~ 287 (296)
T 2qhp_A 215 TCGINGSYVFTPGVVSFQETPKVPVADTVGAGDSFTAAFCASILNGKS-------VPEAHKLAVEVSAYVCTQSGAMPEL 287 (296)
T ss_dssp ECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHTCC-------HHHHHHHHHHHHHHHHTSSSSSCCC
T ss_pred eecCCCeEEEECCeEEEeCCCCCccccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 999999999998888999999999999999999999999999999999 9999999999999999999998654
Q ss_pred C
Q 029908 157 P 157 (185)
Q Consensus 157 ~ 157 (185)
|
T Consensus 288 ~ 288 (296)
T 2qhp_A 288 P 288 (296)
T ss_dssp C
T ss_pred c
Confidence 4
No 37
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=99.94 E-value=2.7e-26 Score=185.34 Aligned_cols=147 Identities=25% Similarity=0.320 Sum_probs=121.3
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHH-hhccc-cEEEcCHHHHhHhhCCCCCCHH----HHHHhcCCC-CcEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMS-IWDKA-EVIKVSDVELEFLTGSDKIDDE----SALSLWHPN-LKLL 74 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~-~l~~~-dii~~n~~E~~~l~~~~~~~~~----~~~~l~~~g-~~~v 74 (185)
+.++++|+++++||+. .. +.+ +.+++ |++++|++|++.|++....+.+ .++++.+.| ++.|
T Consensus 154 ~~a~~~g~~v~~D~~~--------~~----~~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~~v 221 (309)
T 3cqd_A 154 SAAQKQGIRCIVDSSG--------EA----LSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKAKRV 221 (309)
T ss_dssp HHHHTTTCEEEEECCH--------HH----HHHHTTTCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHHHTTSBSCE
T ss_pred HHHHHcCCeEEEECCh--------HH----HHHHHHhCCCEEEeeCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCCEE
Confidence 4678889999999972 22 233 33788 9999999999999987643222 233666788 9999
Q ss_pred EEEcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCC
Q 029908 75 LVTLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIP 154 (185)
Q Consensus 75 vit~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~ 154 (185)
++|.|++|++++++++.+++|+++++++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.|+.
T Consensus 222 vvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~~~~~G~~- 293 (309)
T 3cqd_A 222 VVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENAS-------LEEMVRFGVAAGSAATLNQGTR- 293 (309)
T ss_dssp EEECGGGCEEEECSSCEEEECCCSCCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTC------
T ss_pred EEEecCCceEEEECCceEEEeCCccccCCCcCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCcCCC-
Confidence 99999999999988888899999999999999999999999999999999 9999999999999999999975
Q ss_pred CCCCHHHHHHHHhcC
Q 029908 155 ALPTESEALALLKRS 169 (185)
Q Consensus 155 ~~~~~~~i~~~~~~~ 169 (185)
.|++++++++++++
T Consensus 294 -~~~~~~v~~~~~~~ 307 (309)
T 3cqd_A 294 -LCSHDDTQKIYAYL 307 (309)
T ss_dssp -CCCHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHh
Confidence 58999999998754
No 38
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=99.94 E-value=1.5e-26 Score=187.50 Aligned_cols=156 Identities=22% Similarity=0.332 Sum_probs=129.8
Q ss_pred HcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCCCceEE
Q 029908 6 EAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGCRY 85 (185)
Q Consensus 6 ~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~~G~~~ 85 (185)
+.+.++++||. .+|. +...+.+.++++++|++++|++|++.|++..+. .+.++++.+.|++.|+||.|++|+++
T Consensus 141 ~~~~~v~~Dp~---~~~~--~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~-~~~~~~l~~~g~~~vvvt~G~~G~~~ 214 (313)
T 3kd6_A 141 DDPKLVVCDTM---NFWI--EGKPEELKKVLARVDVFIVNDSEARLLSGDPNL-VKTARIIREMGPKTLIIKKGEHGALL 214 (313)
T ss_dssp SSCSEEEEECC---HHHH--HHCHHHHHHHHTTCSEEEEEHHHHHHHHSCSCH-HHHHHHHHTTSCSEEEEECTTSCEEE
T ss_pred hhCCEEEEcCh---hhhh--hhhHHHHHHHHhcCCEEEeCHHHHHHHhCCCCH-HHHHHHHHHcCCCEEEEeeCCCcEEE
Confidence 46889999993 2232 334667788999999999999999999986532 23345777889999999999999999
Q ss_pred EEcCceeEecCccc-ccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCC-CCCHHHHH
Q 029908 86 YTKSFKGAVDAFRV-KTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPA-LPTESEAL 163 (185)
Q Consensus 86 ~~~~~~~~~~~~~~-~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~-~~~~~~i~ 163 (185)
+++++.+++|++++ +++|++||||+|+|+|+++|++|.+ .+.+++++|+++|+++|+.++++.|+.+. .|++++++
T Consensus 215 ~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~--~~~~~l~~a~~~a~~~aa~~v~~~G~~~~~~~~~~ev~ 292 (313)
T 3kd6_A 215 FTDNGIFAAPAFPLESIYDPTGAGDTFAGGFIGHLARCGN--TSEAEMRKAVLYGSAMASFCVEQFGPYRYNDLDLLEVD 292 (313)
T ss_dssp EETTEEEEECCCTTCCCSCCTTHHHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHTTSSTTGGGGTCCHHHHH
T ss_pred EECCceEEeCCCCCCCcCCCCCccHHHHHHHHHHHHcCCC--ccccCHHHHHHHHHHHHHHHHeecCCCCCCCCCHHHHH
Confidence 99999999999998 7999999999999999999999871 11122999999999999999999999753 58999999
Q ss_pred HHHhcC
Q 029908 164 ALLKRS 169 (185)
Q Consensus 164 ~~~~~~ 169 (185)
+++++.
T Consensus 293 ~~l~~~ 298 (313)
T 3kd6_A 293 DRYQSF 298 (313)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988654
No 39
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=99.94 E-value=2e-26 Score=189.77 Aligned_cols=150 Identities=23% Similarity=0.299 Sum_probs=127.3
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhc--cccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWD--KAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLG 79 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~--~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G 79 (185)
+.++++|+++++||+... ..+...+.+.++++ ++|++++|++|++.|++..+ .+.+.+.+..+++.|+||.|
T Consensus 196 ~~a~~~g~~v~~D~~~~~----~~~~~~~~l~~ll~~~~~dil~~N~~Ea~~l~g~~~--~~~a~~~l~~~~~~vvvT~G 269 (352)
T 4e3a_A 196 RIAHQHGREMSMTLSDSF----CVDRYRGEFLDLMRSGKVDIVFANRQEALSLYQTDD--FEEALNRIAADCKIAAVTMS 269 (352)
T ss_dssp HHHHHTTCEEEEECCCHH----HHHHHHHHHHHHHHTTSCCEEEEEHHHHHHHTTCSC--HHHHHHHHHHHSSEEEEECG
T ss_pred HHHHHcCCEEEEECCchh----hHHHHHHHHHHHhcccCCcEEEeCHHHHHHHhCCCC--HHHHHHHHhcCCCEEEEEEC
Confidence 568899999999997310 02345677888999 99999999999999998753 23333223347899999999
Q ss_pred CCceEEEEcCceeEecCcccc-cccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCC
Q 029908 80 EHGCRYYTKSFKGAVDAFRVK-TVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPALPT 158 (185)
Q Consensus 80 ~~G~~~~~~~~~~~~~~~~~~-~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~ 158 (185)
.+|++++++++.+++|+++++ ++|++||||+|+|||+++|++|.+ +++|+++|+++|+.+|++.|+.+.+|.
T Consensus 270 ~~G~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~agfl~~l~~g~~-------l~~a~~~A~~aAa~~v~~~G~~~~~~~ 342 (352)
T 4e3a_A 270 ENGAVILKGRERYYVNAIRIREVVDTTGAGDLFASGFLYGYTQGRS-------LEDCGKLGCLAAGIVIQQIGPRPMTSL 342 (352)
T ss_dssp GGCEEEEETTEEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSSSSSCSSCH
T ss_pred CCceEEEECCEEEEECCccCCCCcCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCCCCCcCH
Confidence 999999999999999999985 899999999999999999999999 999999999999999999999988877
Q ss_pred HHHHHH
Q 029908 159 ESEALA 164 (185)
Q Consensus 159 ~~~i~~ 164 (185)
++.+++
T Consensus 343 ~~~~~~ 348 (352)
T 4e3a_A 343 SEAAKQ 348 (352)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776664
No 40
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=99.94 E-value=2.3e-26 Score=189.57 Aligned_cols=139 Identities=21% Similarity=0.303 Sum_probs=121.2
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHH----HHhcC-CCCcEEEE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESA----LSLWH-PNLKLLLV 76 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~----~~l~~-~g~~~vvi 76 (185)
+.++++|++|++||+++ .| ++++++|++++|++|++.|++ ...+.+++ +++.+ .|++.|||
T Consensus 208 ~~a~~~g~~v~~D~~~~--~~-----------~~l~~~dil~pN~~Ea~~l~g-~~~~~~~~~~~a~~l~~~~g~~~Vvv 273 (352)
T 4e84_A 208 EKARAAGKAVLVDPKGD--DW-----------ARYRGASLITPNRAELREVVG-QWKSEDDLRARVANLRAELDIDALLL 273 (352)
T ss_dssp HHHHHTTCEEEEECCSS--CC-----------STTTTCSEECCBHHHHHHHHC-CCSSHHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHhcCCEEEEECCCc--ch-----------hhccCCcEEcCCHHHHHHHhC-CCCCHHHHHHHHHHHHHHhCCCEEEE
Confidence 57889999999999863 22 367899999999999999998 33333332 25553 69999999
Q ss_pred EcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCC
Q 029908 77 TLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAIPAL 156 (185)
Q Consensus 77 t~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~ 156 (185)
|+|++|++++++++.+++|+++++++|++||||+|+|||+++|++|.+ +++|+++|+++|+.++++.|+.+
T Consensus 274 T~G~~Ga~~~~~~~~~~~pa~~v~vvDttGAGDaF~ag~l~~l~~g~~-------l~~al~~A~aaaa~~v~~~Ga~~-- 344 (352)
T 4e84_A 274 TRSEEGMTLFSAGGELHAPALAREVFDVSGAGDTVIATVATMLGAGVP-------LVDAVVLANRAAGIVVGKLGTAT-- 344 (352)
T ss_dssp ECGGGCEEEEETTEEEEECCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSCC--
T ss_pred EcCCCcEEEEECCceEEecCCCcCccCCccccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCCcc--
Confidence 999999999999999999999999999999999999999999999999 99999999999999999999875
Q ss_pred CCHHHHH
Q 029908 157 PTESEAL 163 (185)
Q Consensus 157 ~~~~~i~ 163 (185)
++++||+
T Consensus 345 ~t~~el~ 351 (352)
T 4e84_A 345 VDYDELF 351 (352)
T ss_dssp CCHHHHT
T ss_pred CCHHHhc
Confidence 6888875
No 41
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.94 E-value=1.2e-26 Score=189.42 Aligned_cols=149 Identities=18% Similarity=0.182 Sum_probs=127.3
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhc---cccEEEcCHHH-HhHhhCCCCCCHHH----HHHhcCCCCcE
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWD---KAEVIKVSDVE-LEFLTGSDKIDDES----ALSLWHPNLKL 73 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~---~~dii~~n~~E-~~~l~~~~~~~~~~----~~~l~~~g~~~ 73 (185)
+.++++|+++++||+. . .+.++++ ++|++++|++| ++.|++....+.++ +.++.+. ++.
T Consensus 170 ~~a~~~g~~v~~D~~~--------~----~~~~~l~~~~~~dil~~N~~E~~~~l~g~~~~~~~~~~~~~~~l~~~-~~~ 236 (331)
T 2ajr_A 170 RLARERGVFVFVEQTP--------R----LLERIYEGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVKLAEKLAEK-SQV 236 (331)
T ss_dssp HHHHHTTCEEEEECCH--------H----HHHHHHHSSCCCSEECCCCTTCCSCBTTBCCCSHHHHHHHHHHHHHH-SSE
T ss_pred HHHHHcCCEEEEECCh--------H----HHHHHHhcCCCCeEEEeCccchHHHHhCCCCCCHHHHHHHHHHHHHh-cCE
Confidence 5678899999999972 2 2444555 49999999999 99998876543332 2355556 899
Q ss_pred EEEEcCCCceEEEEcCceeEec-CcccccccCCCcchHHHHHHHHHHH-ccCCCCCChHHHHHHHHHHHHHhHHHhhccC
Q 029908 74 LLVTLGEHGCRYYTKSFKGAVD-AFRVKTVDTTGAGDAFVGALLCKIV-DDQSAIEDEPRLREILKFANACGALSTTKKG 151 (185)
Q Consensus 74 vvit~G~~G~~~~~~~~~~~~~-~~~~~~~d~~GaGDaf~A~~~~~l~-~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g 151 (185)
|++|+|++|++++++++.+++| +++++++|++||||+|+|+|+++|+ +|.+ +++|+++|+++|+.++++.|
T Consensus 237 vvvT~G~~Ga~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~l~~l~~~g~~-------~~~al~~A~a~aa~~v~~~G 309 (331)
T 2ajr_A 237 SVVSYEVKNDIVATREGVWLIRSKEEIDTSHLLGAGDAYVAGMVYYFIKHGAN-------FLEMAKFGFASALAATRRKE 309 (331)
T ss_dssp EEEEETTTEEEEECSSCEEEEEESSCCCGGGCTTHHHHHHHHHHHHHHHHCSC-------HHHHHHHHHHHHHHHTTSSS
T ss_pred EEEeecCCceEEEeCCcEEEEecCCcccccCCCchHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCcC
Confidence 9999999999999888888999 9889999999999999999999999 9999 99999999999999999999
Q ss_pred CCCCCCCHHHHHHHHhcCcch
Q 029908 152 AIPALPTESEALALLKRSTII 172 (185)
Q Consensus 152 ~~~~~~~~~~i~~~~~~~~~~ 172 (185)
+. +|++++++++++++.++
T Consensus 310 ~~--~~~~~ev~~~~~~~~~~ 328 (331)
T 2ajr_A 310 KY--MPDLEAIKKEYDHFTVE 328 (331)
T ss_dssp CC--CCCHHHHHTTGGGEEEE
T ss_pred cC--CCCHHHHHHHHhhcEEE
Confidence 74 69999999999887764
No 42
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=99.93 E-value=1.4e-25 Score=185.84 Aligned_cols=149 Identities=17% Similarity=0.218 Sum_probs=123.8
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCC---CHHH-HHHhcCC-------C
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKI---DDES-ALSLWHP-------N 70 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~---~~~~-~~~l~~~-------g 70 (185)
+.++++|+++++||.. +.| .+...+.+.++++++|++++|++|++.|++.... +.+. ++++.+. +
T Consensus 201 ~~a~~~g~~v~ld~~~--~~~--~~~~~~~l~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~~~~~~~~g 276 (370)
T 3vas_A 201 KHSLENEKLFCFNLSA--PFL--SQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHATARYIADLPFADGKKR 276 (370)
T ss_dssp HHHHHTTCEEEEECCC--HHH--HHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHHHHHHHHSCCTTCCCC
T ss_pred HHHHHcCCEEEEECCc--HHH--HHHHHHHHHHHHhhCCEEEcCHHHHHHHhcccCCCccCHHHHHHHHHhhcccccccC
Confidence 5688899999999963 111 1234577889999999999999999999876432 2222 2345443 8
Q ss_pred CcEEEEEcCCCceEEEE--cCceeEecCccc---ccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHH
Q 029908 71 LKLLLVTLGEHGCRYYT--KSFKGAVDAFRV---KTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGAL 145 (185)
Q Consensus 71 ~~~vvit~G~~G~~~~~--~~~~~~~~~~~~---~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~ 145 (185)
++.||||+|++|+++++ +++.+++|++++ +++|++||||+|+|||+++|++|.+ +++|+++|+++|+.
T Consensus 277 ~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag~l~~l~~g~~-------l~~a~~~A~aaAa~ 349 (370)
T 3vas_A 277 KRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKP-------MITSLHAAVKAAAY 349 (370)
T ss_dssp CCEEEEEETTEEEEEEETTCSSCEEECCCCCCTTTCSCCTTHHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHH
T ss_pred CCEEEEecCCCceEEEEcCCCeEEEEecccccCCCcCCCCChHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHH
Confidence 99999999999999999 788899999987 8999999999999999999999999 99999999999999
Q ss_pred HhhccCCCCCCCCHHHHH
Q 029908 146 STTKKGAIPALPTESEAL 163 (185)
Q Consensus 146 ~~~~~g~~~~~~~~~~i~ 163 (185)
+|++.|+. +|+++++.
T Consensus 350 ~v~~~G~~--~p~~~~~~ 365 (370)
T 3vas_A 350 IICRSGFS--LGSRDSYS 365 (370)
T ss_dssp HHTSSSSC--CCCGGGGC
T ss_pred HHcccCCc--CCCCccce
Confidence 99999985 57777664
No 43
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=99.92 E-value=1.9e-25 Score=185.23 Aligned_cols=153 Identities=15% Similarity=0.173 Sum_probs=117.2
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCC---HHHH-HHh-------cCCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKID---DESA-LSL-------WHPN 70 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~---~~~~-~~l-------~~~g 70 (185)
+.++++|+++++|++.... .+..++.+.++++++|++++|++|+..|++..... .+.+ +.+ ...+
T Consensus 203 ~~a~~~g~~v~ldls~~~~----~~~~~~~l~~ll~~~Dil~~Ne~Ea~~l~~~~~~~~~~~~~~a~~l~~~~~~~~~~~ 278 (372)
T 3uq6_A 203 KHSLENEKLFCFNLSAPFL----SQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHATARYIADLPFADGKKR 278 (372)
T ss_dssp HHHHHTTCEEEEECCCHHH----HHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHHHHHHHHSCCTTCCCC
T ss_pred HHHHHcCCeEeeccccchh----hhhhHHHHHHHhhcCCcccCCHHHHHHHhCCCCCchhHHHHHHHHHhhhhhhhhcCC
Confidence 5688999999999974210 23446778889999999999999999998654322 2222 111 1357
Q ss_pred CcEEEEEcCCCceEEEEcCc--eeEecCcc---cccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHH
Q 029908 71 LKLLLVTLGEHGCRYYTKSF--KGAVDAFR---VKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGAL 145 (185)
Q Consensus 71 ~~~vvit~G~~G~~~~~~~~--~~~~~~~~---~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~ 145 (185)
++.||+|+|++|+++++++. ...+|.++ .+++|||||||+|+|||+++|++|++ +++|+++|+.+|+.
T Consensus 279 ~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDaF~agfl~~l~~g~~-------l~~a~~~a~~aAa~ 351 (372)
T 3uq6_A 279 KRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKP-------MITSLHAAVKAAAY 351 (372)
T ss_dssp CCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHH
T ss_pred ceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCchHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHH
Confidence 88999999999999998663 23344333 37899999999999999999999999 99999999999999
Q ss_pred HhhccCCCCCCCCHHHHHHHHh
Q 029908 146 STTKKGAIPALPTESEALALLK 167 (185)
Q Consensus 146 ~~~~~g~~~~~~~~~~i~~~~~ 167 (185)
+|++.|+. +|++++++-.++
T Consensus 352 vv~~~Ga~--lp~r~~~~lkln 371 (372)
T 3uq6_A 352 IICRSGFS--LGSRDSYSLKIN 371 (372)
T ss_dssp HHTSSSSC--CCCGGGCC----
T ss_pred HHcCCCCC--CCChhHHHHHhc
Confidence 99999974 678877765544
No 44
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=99.92 E-value=1.8e-24 Score=177.40 Aligned_cols=145 Identities=17% Similarity=0.171 Sum_probs=117.7
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCC---CCCHHHH-HHhc------CCCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSD---KIDDESA-LSLW------HPNL 71 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~---~~~~~~~-~~l~------~~g~ 71 (185)
+.++++|+++++||... .| .+...+.+.++++++|++++|++|++.|++.. ..+.+.+ +++. ..++
T Consensus 185 ~~a~~~g~~v~~d~~~~--~~--~~~~~~~l~~~l~~~dil~~N~~Ea~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~ 260 (347)
T 3otx_A 185 RKAREVDGLFMINLSAP--FI--MQFFSAQLGEVLPYTDIIVANRHEAKEFANMMKWDTDCVEEIARRAVSEVPYTGTKG 260 (347)
T ss_dssp HHHHHTTCEEEEECCCH--HH--HHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHHTCCCCCHHHHHHHHHHTSCCCCSSC
T ss_pred HHHHHhCCEEEeeCchh--hh--HHHHHHHHHHHHhhCCEEecCHHHHHHHhcccCCCcCCHHHHHHHHHhhhccccCCC
Confidence 57888999999999631 11 12346778899999999999999999998642 2233333 3444 4799
Q ss_pred cEEEEEcCCCceEEEEcCceeEecCccc---ccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhh
Q 029908 72 KLLLVTLGEHGCRYYTKSFKGAVDAFRV---KTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTT 148 (185)
Q Consensus 72 ~~vvit~G~~G~~~~~~~~~~~~~~~~~---~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~ 148 (185)
+.|+||+|++|++++++++.+++|++++ +++|++||||+|+|||+++|++|++ +++|+++|+++|+.+|+
T Consensus 261 ~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~-------l~~a~~~a~~~aa~~v~ 333 (347)
T 3otx_A 261 RVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFLSAYAVGKD-------LRRCCETGHYTAQEVIQ 333 (347)
T ss_dssp CEEEEEETTEEEEEEETTEEEEECCCCCCGGGCCSSCCSHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHHT
T ss_pred CEEEEEeCCCCeEEEECCeEEEEEecccCCCCCCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHc
Confidence 9999999999999999988889998877 7899999999999999999999999 99999999999999999
Q ss_pred ccCCCCCCCCH
Q 029908 149 KKGAIPALPTE 159 (185)
Q Consensus 149 ~~g~~~~~~~~ 159 (185)
+.|+. +|++
T Consensus 334 ~~G~~--~p~~ 342 (347)
T 3otx_A 334 RDGCS--FPEK 342 (347)
T ss_dssp CC------CCS
T ss_pred ccCCC--CCCC
Confidence 99964 4543
No 45
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=99.92 E-value=6.7e-25 Score=181.40 Aligned_cols=141 Identities=18% Similarity=0.248 Sum_probs=115.1
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCC---CCCHHHH-HHhcC------CCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSD---KIDDESA-LSLWH------PNL 71 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~---~~~~~~~-~~l~~------~g~ 71 (185)
+.++++|+++++||... .| .+..++.+.++++++|++++|++|++.|++.. ..+.+.+ +++.+ .++
T Consensus 199 ~~a~~~g~~v~~d~~~~--~~--~~~~~~~l~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~~~~~~~g~ 274 (365)
T 3loo_A 199 KEAAATGRMFMMNLSAP--FV--PQFYKNNLEEIFPYVDVLFGNETEAIALAKEFNYGTEDLREIGKRIAALPKENGKRK 274 (365)
T ss_dssp HHHHHTTCEEEEECCST--HH--HHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHHHHHHHTSCCSSTTSC
T ss_pred HHHHHcCCEEEEECCch--hh--hHHHHHHHHHHHHhCCEEecCHHHHHHHhcccCCCCCCHHHHHHHHHhhhhhccCCC
Confidence 56788999999998631 11 23446778899999999999999999998753 2233333 35544 389
Q ss_pred cEEEEEcCCCceEEE--EcCceeEecCccc---ccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHH
Q 029908 72 KLLLVTLGEHGCRYY--TKSFKGAVDAFRV---KTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALS 146 (185)
Q Consensus 72 ~~vvit~G~~G~~~~--~~~~~~~~~~~~~---~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~ 146 (185)
+.||||+|++|++++ ++++.+++|++++ +++|++||||+|+|||+++|++|++ +++|+++|+++|+.+
T Consensus 275 ~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~agfl~~l~~g~~-------l~~a~~~a~~~Aa~~ 347 (365)
T 3loo_A 275 RIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGGFLAQLLQSRT-------VDVCIKCGIWAAREI 347 (365)
T ss_dssp CEEEEEETTEEEEEEETTCSCCEEECCCCCC------CTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCCCEEEEEecCCeEEEEeccccCCCCccCCCChHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHH
Confidence 999999999999999 7778889999987 8999999999999999999999999 999999999999999
Q ss_pred hhccCCC
Q 029908 147 TTKKGAI 153 (185)
Q Consensus 147 ~~~~g~~ 153 (185)
+++.|+.
T Consensus 348 v~~~G~~ 354 (365)
T 3loo_A 348 IQRSGCT 354 (365)
T ss_dssp HHHGGGG
T ss_pred HcCCCCC
Confidence 9999986
No 46
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.92 E-value=2.7e-25 Score=178.98 Aligned_cols=150 Identities=20% Similarity=0.145 Sum_probs=119.6
Q ss_pred hHHHHcCCeEEEcCCC-CCCCCCCh--HHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEc
Q 029908 2 KAAKEAGALLSYDPNL-RLPLWPSP--EEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTL 78 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~-~~~~~~~~--~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~ 78 (185)
+.++++|++|++||+. ....|... ....+.+.++++++|++++|++|++.|++.... .+.++++.+.|++.||||.
T Consensus 139 ~~~~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~-~~~~~~l~~~g~~~vvvT~ 217 (298)
T 1vk4_A 139 PVLRRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLKYLDLFKVDSREAETLTGTNDL-RESCRIIRSFGAKIILATH 217 (298)
T ss_dssp HHHHHHCSEEEEETHHHHEEEETTEEEECCCTTHHHHGGGCSEEEEEHHHHHHHHSCSCH-HHHHHHHHHTTCSSEEEEE
T ss_pred HHHHHcCCEEEEecCccccccccccccccchHHHHhhcccCCEEecCHHHHHHHhCCCCH-HHHHHHHHhcCCCEEEEEc
Confidence 5678889999999972 11111000 000123567899999999999999999987532 2233466678999999999
Q ss_pred CCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHc-cCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCC
Q 029908 79 GEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVD-DQSAIEDEPRLREILKFANACGALSTTKKGAIPALP 157 (185)
Q Consensus 79 G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~-g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~ 157 (185)
++|++++++ +.+++|+++++++|++||||+|+|+|+++|++ |.+ +++|+++|+++|+.++++.|+.+. |
T Consensus 218 -~~G~~~~~~-~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~~g~~-------~~~a~~~A~a~aa~~v~~~G~~~~-~ 287 (298)
T 1vk4_A 218 -ASGVIVFDG-NFYEASFRSWSLEGRTGRGDTCTAAFLVGFVFKKMS-------IEKATKFAAAVTSVKMRHPGPLRR-E 287 (298)
T ss_dssp -TTEEEEESS-SEEEEECCCSSGGGGTTHHHHHHHHHHHHHHTSCCC-------HHHHHHHHHHHHHHHTTSSSSCCG-G
T ss_pred -CCCcEEEeC-CEEEeccCCcccCCCcCccHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHccCCCCCC-C
Confidence 999999887 78899999999999999999999999999999 999 999999999999999999998754 5
Q ss_pred CHHHH
Q 029908 158 TESEA 162 (185)
Q Consensus 158 ~~~~i 162 (185)
+++++
T Consensus 288 ~~~el 292 (298)
T 1vk4_A 288 DLEAI 292 (298)
T ss_dssp GGGGC
T ss_pred CHHHH
Confidence 55544
No 47
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=99.92 E-value=1.6e-25 Score=181.19 Aligned_cols=139 Identities=15% Similarity=0.234 Sum_probs=118.4
Q ss_pred eEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHHHHhcCCCCcEEEEEcCCCceEEEEcC
Q 029908 10 LLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGCRYYTKS 89 (185)
Q Consensus 10 ~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~~~l~~~g~~~vvit~G~~G~~~~~~~ 89 (185)
+|++||+.+...| ..+.+.++++++|++++|++|++.|++....+.. ++ .|++|+|++|+++++++
T Consensus 162 ~v~~D~~~~~~~~-----~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~---~l------~vvvT~G~~Ga~~~~~~ 227 (306)
T 3bf5_A 162 KIIFDPSQEIHKY-----SKDELKKFHEISYMSIFNDHEYRVFREMTGLSSP---KV------TTIVTNGERGSSLFMDG 227 (306)
T ss_dssp EEEECCGGGGGGS-----CHHHHHHHHHHCSEEEEEHHHHHHHHHHHCCSSC---SS------CEEEEEGGGEEEEEETT
T ss_pred cEEEcCchhhhhc-----cHHHHHHHHhcCCEEEcCHHHHHHHhCCCCcCcc---cE------EEEEeecccCeEEEeCC
Confidence 8999998532222 1456678889999999999999999865433211 22 19999999999999988
Q ss_pred ceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhc--cCCCCCCCCHHHHHHHHh
Q 029908 90 FKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTK--KGAIPALPTESEALALLK 167 (185)
Q Consensus 90 ~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~--~g~~~~~~~~~~i~~~~~ 167 (185)
+.+++|+++++ +|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++ .|+.+.+|++++++++++
T Consensus 228 ~~~~~~~~~v~-vDttGAGDaF~ag~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~~~G~~~~~p~~~ev~~~~~ 299 (306)
T 3bf5_A 228 KKYDFPAIPSS-GDTVGAGDSFRAGLYLALYNRRS-------IEKGMIYGTIIAHHVIDDGIENFSLNMEDLERETENYR 299 (306)
T ss_dssp EEEEEECCCCC-SCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHHCSTTCCCCHHHHHHHHHHHH
T ss_pred cEEEecCCcCC-CCCCCccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhccCCccccccCCCHHHHHHHHH
Confidence 88899999999 99999999999999999999999 999999999999999999 999877899999999987
Q ss_pred cCc
Q 029908 168 RST 170 (185)
Q Consensus 168 ~~~ 170 (185)
+.+
T Consensus 300 ~~~ 302 (306)
T 3bf5_A 300 RMF 302 (306)
T ss_dssp HHC
T ss_pred hhc
Confidence 654
No 48
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=99.91 E-value=7e-24 Score=173.67 Aligned_cols=141 Identities=21% Similarity=0.330 Sum_probs=118.1
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCC---CCCHHH-HHHhcC------CCC
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSD---KIDDES-ALSLWH------PNL 71 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~---~~~~~~-~~~l~~------~g~ 71 (185)
+.++++|+++++||.. +.| .+...+.+.++++++|++++|++|++.|++.. ..+.+. ++++.+ .|+
T Consensus 184 ~~a~~~g~~v~~d~~~--~~~--~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~~~~~~~g~ 259 (345)
T 1bx4_A 184 HHASENNRIFTLNLSA--PFI--SQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEIAKKTQALPKMNSKRQ 259 (345)
T ss_dssp HHHHHTTCEEEEECCS--HHH--HHHTHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHHHHHHHTSCCSCTTSC
T ss_pred HHHHHcCCEEEEeCCc--HHH--HHHHHHHHHHHhccCCEEeCCHHHHHHHhcccCCCCCCHHHHHHHHHhcccccccCC
Confidence 5678889999999963 122 12345667889999999999999999997643 223333 335666 599
Q ss_pred cEEEEEcCCCceEEEEcCceeEecCccc---ccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhh
Q 029908 72 KLLLVTLGEHGCRYYTKSFKGAVDAFRV---KTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTT 148 (185)
Q Consensus 72 ~~vvit~G~~G~~~~~~~~~~~~~~~~~---~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~ 148 (185)
+.|++|+|++|++++++++.+++|++++ +++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.+++
T Consensus 260 ~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaf~ag~~~~l~~g~~-------~~~a~~~A~~~aa~~v~ 332 (345)
T 1bx4_A 260 RIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKP-------LTECIRAGHYAASIIIR 332 (345)
T ss_dssp CEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHTT
T ss_pred CEEEEEeCCCCeEEEECCeEEEEeccccCcCccccCCCcchHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHh
Confidence 9999999999999998888889999887 8999999999999999999999999 99999999999999999
Q ss_pred ccCCC
Q 029908 149 KKGAI 153 (185)
Q Consensus 149 ~~g~~ 153 (185)
+.|+.
T Consensus 333 ~~G~~ 337 (345)
T 1bx4_A 333 RTGCT 337 (345)
T ss_dssp SSSSC
T ss_pred ccCCC
Confidence 99986
No 49
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=99.91 E-value=1.1e-23 Score=168.31 Aligned_cols=143 Identities=24% Similarity=0.249 Sum_probs=115.1
Q ss_pred hHHHH--cCCeEEEcCCCCC---CCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHH----HHHhcCCCCc
Q 029908 2 KAAKE--AGALLSYDPNLRL---PLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDES----ALSLWHPNLK 72 (185)
Q Consensus 2 ~~a~~--~g~~v~~D~~~~~---~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~----~~~l~~~g~~ 72 (185)
+.+++ +|++|++||+++. ..|.+.+.......++++++|++++|+.|++.|++....+.++ ++++.+.|++
T Consensus 111 ~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g~~~~~~~~~~~~a~~l~~~g~~ 190 (283)
T 2ddm_A 111 TALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTGKNCRDLDSAIAAAKSLLSDTLK 190 (283)
T ss_dssp HHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCBHHHHHHHHTSCCSSHHHHHHHHHHHCCSSCC
T ss_pred HHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCC
Confidence 34555 7999999999875 4665333334444578999999999999999999976544332 2367778999
Q ss_pred EEEEEcCCC-------ceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHH
Q 029908 73 LLLVTLGEH-------GCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGAL 145 (185)
Q Consensus 73 ~vvit~G~~-------G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~ 145 (185)
.|++|.|.. |++++++++.+++|++++. +|++||||+|+|+|+++|++|.+ +.+|+++|+++++.
T Consensus 191 ~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~v~-vdt~GAGDaf~a~~~~~l~~g~~-------~~~A~~~A~a~a~~ 262 (283)
T 2ddm_A 191 WVVVTSASGNEENQEMQVVVVTADSVNVISHSRVK-TDLKGTGDLFCAQLISGLLKGKA-------LTDAVHRAGLRVLE 262 (283)
T ss_dssp EEEEEC-------CEEEEEEEETTEEEEEEEECCC-CCCCCHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHH
T ss_pred EEEEccccCccCCCceeEEEEeCCceEEEeeceeC-CCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHH
Confidence 999999998 8888888888888888886 79999999999999999999999 99999999999999
Q ss_pred HhhccCC
Q 029908 146 STTKKGA 152 (185)
Q Consensus 146 ~~~~~g~ 152 (185)
++++...
T Consensus 263 ~v~~~~~ 269 (283)
T 2ddm_A 263 VMRYTQQ 269 (283)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9987643
No 50
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=99.90 E-value=4e-23 Score=162.84 Aligned_cols=140 Identities=23% Similarity=0.210 Sum_probs=112.5
Q ss_pred hHHHHcC-CeEEEcCCCCCC----CCCChHHHHHHH-HHhhccccEEEcCHHHHhHhhCCCCCCHHH----HHHhcCCCC
Q 029908 2 KAAKEAG-ALLSYDPNLRLP----LWPSPEEAREQI-MSIWDKAEVIKVSDVELEFLTGSDKIDDES----ALSLWHPNL 71 (185)
Q Consensus 2 ~~a~~~g-~~v~~D~~~~~~----~~~~~~~~~~~~-~~~l~~~dii~~n~~E~~~l~~~~~~~~~~----~~~l~~~g~ 71 (185)
+.+++++ +++++||+++.. +|. +...+.+ .++++++|+++||+.|++.|++....+.++ ++++.+.|+
T Consensus 90 ~~~~~~~~~~vv~Dp~~~~~~g~~l~~--~~~~~~~~~~ll~~~dil~pN~~E~~~L~g~~~~~~~~~~~~a~~l~~~g~ 167 (258)
T 1ub0_A 90 EAVRRFGVRPLVVDPVMVAKSGDPLLA--KEAAAALKERLFPLADLVTPNRLEAEALLGRPIRTLKEAEEAAKALLALGP 167 (258)
T ss_dssp HHHHHTTCCSEEECCCC---------C--HHHHHHHHHHTGGGCSEECCBHHHHHHHHCSCCCSHHHHHHHHHHHHTTSC
T ss_pred HHHHhCCCCcEEECCeeecCCCCcccC--hHHHHHHHHhhcccCeEEeCCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCC
Confidence 4567788 899999998754 453 2233344 568999999999999999999876544332 236667899
Q ss_pred cEEEEEcCCC-c----eEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHH
Q 029908 72 KLLLVTLGEH-G----CRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALS 146 (185)
Q Consensus 72 ~~vvit~G~~-G----~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~ 146 (185)
+.|++|.|.. | ++++++++.+++|+++++++|++||||+|+|+|+++|++|.+ +.+|+++|+++++.+
T Consensus 168 ~~vvvt~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~g~~-------~~~a~~~a~~~~~~~ 240 (258)
T 1ub0_A 168 KAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRVHTRNTHGTGCTLSAAIAALLAKGRP-------LAEAVAEAKAYLTRA 240 (258)
T ss_dssp SCEEEEEEECC---EEEEEEETTEEEEEEECCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHH
T ss_pred CEEEEccCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHH
Confidence 9999999998 8 788888788889988889999999999999999999999999 999999999999998
Q ss_pred hhcc
Q 029908 147 TTKK 150 (185)
Q Consensus 147 ~~~~ 150 (185)
+++.
T Consensus 241 ~~~~ 244 (258)
T 1ub0_A 241 LKTA 244 (258)
T ss_dssp HHTC
T ss_pred HHHh
Confidence 8764
No 51
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=99.89 E-value=1e-22 Score=163.40 Aligned_cols=141 Identities=18% Similarity=0.146 Sum_probs=110.0
Q ss_pred hHHHHcCCe-EEEcCCCCC----CCCCChHHHHHHHH-HhhccccEEEcCHHHHhHhhCC-CCCCHHH----HHHhcCCC
Q 029908 2 KAAKEAGAL-LSYDPNLRL----PLWPSPEEAREQIM-SIWDKAEVIKVSDVELEFLTGS-DKIDDES----ALSLWHPN 70 (185)
Q Consensus 2 ~~a~~~g~~-v~~D~~~~~----~~~~~~~~~~~~~~-~~l~~~dii~~n~~E~~~l~~~-~~~~~~~----~~~l~~~g 70 (185)
+.+++.+.+ |++||+++. .+|. +...+.+. ++++++|+++||+.|++.|++. ...+.++ ++++.+.|
T Consensus 114 ~~~~~~~~~~vvlDp~~~~~~g~~l~~--~~~~~~l~~~ll~~~dil~pN~~Ea~~L~g~~~~~~~~~~~~~a~~l~~~g 191 (288)
T 1jxh_A 114 ERLQRHHVRNVVLDTVMLAKSGDPLLS--PSAIETLRVRLLPQVSLITPNLPEAAALLDAPHARTEQEMLAQGRALLAMG 191 (288)
T ss_dssp HHHHHTTCCSEEEECCCC------CCC--HHHHHHHHHHTGGGCSEEECBHHHHHHHHTCCCCCSHHHHHHHHHHHHHTT
T ss_pred HHHHHCCCCeEEEcCcccCCCCCccCC--HHHHHHHHHHHHhhCcEEcCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhC
Confidence 467788986 999999874 3453 23334455 4899999999999999999987 5444333 23666789
Q ss_pred CcEEEEEcCCCc-----eEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHH
Q 029908 71 LKLLLVTLGEHG-----CRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGAL 145 (185)
Q Consensus 71 ~~~vvit~G~~G-----~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~ 145 (185)
++.|++|.|.+| ++++++++.+++|+++++++|++||||+|+|+|+++|++|.+ +.+|+++|+++++.
T Consensus 192 ~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~vdttGAGD~f~a~~~a~l~~g~~-------~~~A~~~A~a~a~~ 264 (288)
T 1jxh_A 192 CEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRVNTKNTHGTGCTLSAALAALRPRHRS-------WGETVNEAKAWLSA 264 (288)
T ss_dssp CSEEEEBC---------CEEECSSCEEEC---CCCCSCCBTHHHHHHHHHHHHGGGSSS-------HHHHHHHHHHHHHH
T ss_pred CCEEEEeccCCCCCceeEEEEECCeEEEEeccccCCCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHH
Confidence 999999999999 888888888889998899999999999999999999999999 99999999999999
Q ss_pred HhhccC
Q 029908 146 STTKKG 151 (185)
Q Consensus 146 ~~~~~g 151 (185)
++++..
T Consensus 265 ~v~~~~ 270 (288)
T 1jxh_A 265 ALAQAD 270 (288)
T ss_dssp HHTTGG
T ss_pred HHHhhc
Confidence 997763
No 52
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=99.89 E-value=3.6e-22 Score=158.51 Aligned_cols=143 Identities=18% Similarity=0.138 Sum_probs=118.0
Q ss_pred hHHHHcCC-eEEEcCCCCCCCCCC--hHHHHHHHH-HhhccccEEEcCHHHHhHhhCCC-CCCHHH----HHHhcCCCCc
Q 029908 2 KAAKEAGA-LLSYDPNLRLPLWPS--PEEAREQIM-SIWDKAEVIKVSDVELEFLTGSD-KIDDES----ALSLWHPNLK 72 (185)
Q Consensus 2 ~~a~~~g~-~v~~D~~~~~~~~~~--~~~~~~~~~-~~l~~~dii~~n~~E~~~l~~~~-~~~~~~----~~~l~~~g~~ 72 (185)
+.+++++. ++++||+++...|.. .+...+.+. ++++++|+++||..|++.|++.. ..+.++ ++++.+.|++
T Consensus 94 ~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L~g~~~~~~~~~~~~~a~~l~~~g~~ 173 (271)
T 2i5b_A 94 KTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQLSGMDELKTVDDMIEAAKKIHALGAQ 173 (271)
T ss_dssp HHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHHHTCCCCCSHHHHHHHHHHHHTTTCS
T ss_pred HHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 45677888 699999988765542 233444554 78999999999999999999876 443332 2367778999
Q ss_pred EEEEEcCC--Cce----EEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHH
Q 029908 73 LLLVTLGE--HGC----RYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALS 146 (185)
Q Consensus 73 ~vvit~G~--~G~----~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~ 146 (185)
.|++|.|. +|+ +++++++.+++++++++++|++|+||+|+|+|+++|++|.+ +.+|+++|+++++.+
T Consensus 174 ~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~g~~-------~~~A~~~A~~~~~~~ 246 (271)
T 2i5b_A 174 YVVITGGGKLKHEKAVDVLYDGETAEVLESEMIDTPYTHGAGCTFSAAVTAELAKGAE-------VKEAIYAAKEFITAA 246 (271)
T ss_dssp EEEEECGGGSCSSSEEEEEECSSCEEEEEECCCCCSCCBTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHH
Confidence 99999998 784 67777778889998889999999999999999999999999 999999999999999
Q ss_pred hhccC
Q 029908 147 TTKKG 151 (185)
Q Consensus 147 ~~~~g 151 (185)
+++..
T Consensus 247 ~~~~~ 251 (271)
T 2i5b_A 247 IKESF 251 (271)
T ss_dssp HHTCC
T ss_pred HHHhh
Confidence 98753
No 53
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=99.88 E-value=1.3e-22 Score=168.51 Aligned_cols=141 Identities=22% Similarity=0.309 Sum_probs=113.9
Q ss_pred hHHHH-cCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCC-C---C--------HHH----HH
Q 029908 2 KAAKE-AGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDK-I---D--------DES----AL 64 (185)
Q Consensus 2 ~~a~~-~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~-~---~--------~~~----~~ 64 (185)
+.+++ +|+++++||.. ..| .+...+.+.++++++|++++|++|++.|++... . + .++ ++
T Consensus 203 ~~a~~~~g~~v~~d~~~--~~~--~~~~~~~l~~ll~~~dil~pN~~Ea~~L~g~~~~~~~~~~~~s~~~~~~~~~~~a~ 278 (383)
T 2abs_A 203 GYAHGIPNAIFTLNLSA--PFC--VELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTALSTANKEHAVEVCTG 278 (383)
T ss_dssp HHHHTSTTCEEEEECCC--HHH--HHHCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC----------CHHHHHHHHHH
T ss_pred HHHHHhcCCEEEEeCCc--HHH--HHHHHHHHHHHHhhCCEEeCCHHHHHHHhcccCcccccccccccccccccHHHHHH
Confidence 46777 89999999863 122 133456678899999999999999999976431 1 0 111 22
Q ss_pred HhcC------C-CCcEEEEEcCCCceEEE-----EcCceeEecCccc---ccccCCCcchHHHHHHHHHHHccCCCCCCh
Q 029908 65 SLWH------P-NLKLLLVTLGEHGCRYY-----TKSFKGAVDAFRV---KTVDTTGAGDAFVGALLCKIVDDQSAIEDE 129 (185)
Q Consensus 65 ~l~~------~-g~~~vvit~G~~G~~~~-----~~~~~~~~~~~~~---~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~ 129 (185)
++.+ . |++.||||+|.+|++++ .+++.+++|++++ +++|++||||+|+|+|+++|++|.+
T Consensus 279 ~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag~~~~l~~g~~----- 353 (383)
T 2abs_A 279 ALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFVGGFLYALSQGKT----- 353 (383)
T ss_dssp HHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHHTTCC-----
T ss_pred HHHhccccccccCCCEEEEEcCCCCeEEEEeecCCCCeEEEecCccCCcCCcCcCCChHHHHHHHHHHHHHcCCC-----
Confidence 4443 3 89999999999999998 5556778888776 8999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHhhccCCC
Q 029908 130 PRLREILKFANACGALSTTKKGAI 153 (185)
Q Consensus 130 ~~~~~a~~~a~~~aa~~~~~~g~~ 153 (185)
+++|+++|+++|+.++++.|+.
T Consensus 354 --l~~al~~A~a~aa~~v~~~Ga~ 375 (383)
T 2abs_A 354 --VKQCIMCGNACAQDVIQHVGFS 375 (383)
T ss_dssp --HHHHHHHHHHHHHHHHTSSSCC
T ss_pred --HHHHHHHHHHHHHHHHhcCCcc
Confidence 9999999999999999999986
No 54
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=99.87 E-value=3.7e-22 Score=161.55 Aligned_cols=139 Identities=17% Similarity=0.172 Sum_probs=108.6
Q ss_pred hHHHHcCC--eEEEcCCCCCC------CCCChHHHHHHHHH-hhccccEEEcCHHHHhHhhCCCCCCHHH----HHHhcC
Q 029908 2 KAAKEAGA--LLSYDPNLRLP------LWPSPEEAREQIMS-IWDKAEVIKVSDVELEFLTGSDKIDDES----ALSLWH 68 (185)
Q Consensus 2 ~~a~~~g~--~v~~D~~~~~~------~~~~~~~~~~~~~~-~l~~~dii~~n~~E~~~l~~~~~~~~~~----~~~l~~ 68 (185)
+.++++|. ++++||+++.. +|. .+...+.+.+ +++++|+++||++|++.|++....+.++ ++++.+
T Consensus 99 ~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~-~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~g~~~~~~~~~~~~~~~l~~ 177 (312)
T 2yxt_A 99 QELKQQNPRLVYVCDPVLGDKWDGEGSMYV-PEDLLPVYKEKVVPLADIITPNQFEAELLSGRKIHSQEEALRVMDMLHS 177 (312)
T ss_dssp HHHHHHCTTCEEEECCCCEEC--CCCEESS-CTTHHHHHHHTTGGGCSEECCCHHHHHHHHSCCCCSHHHHHHHHHHHHH
T ss_pred HHHHhhCCCCeEEECCCcCCCCCCCCCeeC-CHHHHHHHHHHhhhhCCEEcCCHHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 45677775 48999998754 454 2345556664 8999999999999999999876544332 235666
Q ss_pred CCCcEEEEEcCCCc------eEEE-------Ec-C----ceeEecCcccccccCCCcchHHHHHHHHHHHc-cCCCCCCh
Q 029908 69 PNLKLLLVTLGEHG------CRYY-------TK-S----FKGAVDAFRVKTVDTTGAGDAFVGALLCKIVD-DQSAIEDE 129 (185)
Q Consensus 69 ~g~~~vvit~G~~G------~~~~-------~~-~----~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~-g~~~~~~~ 129 (185)
.|++.|+||.|..| ++++ ++ + +.+++|++++++ |++||||+|+|+|+++|++ |.+
T Consensus 178 ~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v-dttGAGDaf~a~~~~~l~~~g~~----- 251 (312)
T 2yxt_A 178 MGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRKVDA-VFVGTGDLFAAMLLAWTHKHPNN----- 251 (312)
T ss_dssp HSCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEEEEECCSS-CCSSHHHHHHHHHHHHHHHSTTC-----
T ss_pred cCCCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEEeecccCC-CCCCchHHHHHHHHHHHHhcCCC-----
Confidence 89999999988764 6665 43 2 567888888887 9999999999999999998 999
Q ss_pred HHHHHHHHHHHHHhHHHhhc
Q 029908 130 PRLREILKFANACGALSTTK 149 (185)
Q Consensus 130 ~~~~~a~~~a~~~aa~~~~~ 149 (185)
+.+|+++|+++++.++++
T Consensus 252 --l~~a~~~A~a~a~~~v~~ 269 (312)
T 2yxt_A 252 --LKVACEKTVSTLHHVLQR 269 (312)
T ss_dssp --HHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHH
Confidence 999999999999887753
No 55
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=99.87 E-value=8.6e-22 Score=158.42 Aligned_cols=139 Identities=19% Similarity=0.185 Sum_probs=112.6
Q ss_pred HHHcCCeEEEcCCCCCC--CCC-ChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCC---CHHH----HHHhcCCCCcE
Q 029908 4 AKEAGALLSYDPNLRLP--LWP-SPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKI---DDES----ALSLWHPNLKL 73 (185)
Q Consensus 4 a~~~g~~v~~D~~~~~~--~~~-~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~---~~~~----~~~l~~~g~~~ 73 (185)
+++.+++|++||+++.. +|. ..++..+.+.++++++|+++||..|++.|++.... +.++ ++++.+.|++.
T Consensus 102 ~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~L~g~~~~~~~~~~~~~~aa~~L~~~g~~~ 181 (291)
T 3mbh_A 102 FRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNLTELFYLLDEPYKADSTDEELKEYLRLLSDKGPQV 181 (291)
T ss_dssp HCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBHHHHHHHHTCCCCSCCCHHHHHHHHHHHHHTSCSE
T ss_pred hcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhCCCE
Confidence 33457999999999864 575 24666777889999999999999999999998643 2222 23677789999
Q ss_pred EEEEcCC-------CceEEEEcC--ceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhH
Q 029908 74 LLVTLGE-------HGCRYYTKS--FKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGA 144 (185)
Q Consensus 74 vvit~G~-------~G~~~~~~~--~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa 144 (185)
|++|.|. .|+++++++ +.++++.+++. +|++|+||+|+|+|+++|++|.+ +.+|+++|++++.
T Consensus 182 Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~-~dt~GaGD~f~aai~a~l~~g~~-------l~~A~~~A~~~~~ 253 (291)
T 3mbh_A 182 VIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPYLP-AHYPGTGDTFTSVITGSLMQGDS-------LPMALDRATQFIL 253 (291)
T ss_dssp EEEEEEEETTEEEEEEEEEEETTTTEEEEEEESCCG-GGSTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHH
T ss_pred EEEEeccccCCCCcEEEEEEeCCCCeEEEEEecccC-CCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHH
Confidence 9999764 467777763 45677877775 89999999999999999999999 9999999999988
Q ss_pred HHhhcc
Q 029908 145 LSTTKK 150 (185)
Q Consensus 145 ~~~~~~ 150 (185)
.++++.
T Consensus 254 ~ai~~~ 259 (291)
T 3mbh_A 254 QGIRAT 259 (291)
T ss_dssp HHHHTT
T ss_pred HHHHHH
Confidence 888653
No 56
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=99.86 E-value=1.2e-21 Score=158.64 Aligned_cols=126 Identities=24% Similarity=0.316 Sum_probs=103.1
Q ss_pred CCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHH-HHhcCCCC--cEEEEEcCCCceE
Q 029908 8 GALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESA-LSLWHPNL--KLLLVTLGEHGCR 84 (185)
Q Consensus 8 g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~-~~l~~~g~--~~vvit~G~~G~~ 84 (185)
++++++||... .+.+.++++++|++++|++|++.+ +.. +.+++ ..+.+.+. +.|++|+|.+|++
T Consensus 179 ~~~v~~d~~~~----------~~~~~~~l~~~dil~~n~~ea~~l-g~~--~~~~~~~~l~~~~~~g~~vvvt~G~~G~~ 245 (312)
T 2hlz_A 179 KIRVSVEVEKP----------REELFQLFGYGDVVFVSKDVAKHL-GFQ--SAEEALRGLYGRVRKGAVLVCAWAEEGAD 245 (312)
T ss_dssp CCEEEEEECSC----------CGGGGGGGGSSSEEEECHHHHHHT-TCC--SHHHHHHHHGGGSCTTCEEEEECGGGCEE
T ss_pred CeEEEEEcccc----------hHHHHHHHhcCCEEEEcHHHHHHc-CCC--CHHHHHHHHHHhcCCCCEEEEEecccCeE
Confidence 78999998642 234577899999999999999987 432 23332 34443222 8999999999999
Q ss_pred EEEc-CceeEecCc-ccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhccCCC
Q 029908 85 YYTK-SFKGAVDAF-RVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTKKGAI 153 (185)
Q Consensus 85 ~~~~-~~~~~~~~~-~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~ 153 (185)
+++. +..+++|++ +++++|++||||+|+|+|+++|++|.+ +++|+++|+++|+.++++.|+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~~G~~ 309 (312)
T 2hlz_A 246 ALGPDGKLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRS-------VQEALRFGCQVAGKKCGLQGFD 309 (312)
T ss_dssp EECTTCCEEEECCCCCSSCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSG
T ss_pred EEccCCCEEECCCCCCCCcccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhhcCcc
Confidence 9875 457788985 468999999999999999999999999 9999999999999999999964
No 57
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=99.86 E-value=2.7e-21 Score=154.88 Aligned_cols=135 Identities=20% Similarity=0.190 Sum_probs=112.2
Q ss_pred cCCeEEEcCCCCC--CCCC-ChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCC---CH-HHHHHhcC-CCC-cEEEEE
Q 029908 7 AGALLSYDPNLRL--PLWP-SPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKI---DD-ESALSLWH-PNL-KLLLVT 77 (185)
Q Consensus 7 ~g~~v~~D~~~~~--~~~~-~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~---~~-~~~~~l~~-~g~-~~vvit 77 (185)
.+.+|++||+++. .+|. ..+...+.+.++++++|+++||..|++.|++.... +. +.++++.+ .|+ +.|++|
T Consensus 100 ~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~~Ea~~L~g~~~~~~~~~~~aa~~L~~~~g~~~~Vvvt 179 (282)
T 3h74_A 100 TLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALLTGAPYQVTPDLEVILPALQAQLKTGAHAVIT 179 (282)
T ss_dssp CCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCHHHHHHHHTCCCCSSCCHHHHHHHHHTTSCTTCEECEE
T ss_pred CCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCHHHHHHHhCCCCCCHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 4789999999985 4565 24666777789999999999999999999988643 22 23347777 899 999999
Q ss_pred cCC----CceEEEE-cCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhc
Q 029908 78 LGE----HGCRYYT-KSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTK 149 (185)
Q Consensus 78 ~G~----~G~~~~~-~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~ 149 (185)
.|. .|+++++ +++.++++.+++. +|++|+||+|+|+|+++|++|.+ +.+|+++|+++++.++++
T Consensus 180 ~G~~~~~~g~~~~~~~~~~~~~~~~~v~-~dt~GaGD~fsaai~a~l~~g~~-------l~~A~~~A~~~~~~ai~~ 248 (282)
T 3h74_A 180 DVQRADQIGCAWLDEAGHVQYCGARRLP-GHYNGTGDTLAAVIAGLLGRGYP-------LAPTLARANQWLNMAVAE 248 (282)
T ss_dssp EEEETTEEEEEEECTTSCEEEEEEECCS-SCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCceEEEEEeCCCeEEEEEecCCC-CCCcCHHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHHHH
Confidence 984 6888785 6667788887775 89999999999999999999999 999999999998888765
No 58
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=99.85 E-value=9.1e-21 Score=152.19 Aligned_cols=139 Identities=23% Similarity=0.179 Sum_probs=112.1
Q ss_pred hHHHHcC--CeEEEcCCCCC----CCCCChHHHHHHHH-HhhccccEEEcCHHHHhHhhCCCCCCHHHH----HHhcCCC
Q 029908 2 KAAKEAG--ALLSYDPNLRL----PLWPSPEEAREQIM-SIWDKAEVIKVSDVELEFLTGSDKIDDESA----LSLWHPN 70 (185)
Q Consensus 2 ~~a~~~g--~~v~~D~~~~~----~~~~~~~~~~~~~~-~~l~~~dii~~n~~E~~~l~~~~~~~~~~~----~~l~~~g 70 (185)
+.+++++ +++++||+++. .+|. +...+.+. .+++++|+++||..|++.|+|.+..+.+++ +++.+.|
T Consensus 100 ~~~~~~~~~~~vv~DPVm~~~~~~~~~~--~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~~~~~~~~~aa~~l~~~g 177 (289)
T 3pzs_A 100 AQVKQANPDAWYFCDPVMGHPEKGCIVA--PGVAEFFCNEALPASDMIAPNLLELEQLSGERVENVEQAVQVARSLCARG 177 (289)
T ss_dssp HHHHHHCTTCEEEECCCCEETTTEECSC--HHHHHHHHHTHHHHCSEECCCHHHHHHHHTSCCCSHHHHHHHHHHHHTTS
T ss_pred HHHHhhCCCCeEEEcCccccCCCCcccC--HHHHHHHHHHhhccCCEEeCCHHHHHHHhCCCCCCHHHHHHHHHHHHHHC
Confidence 3455555 89999997654 2343 45555666 489999999999999999999876554433 3677889
Q ss_pred CcEEEEEcC-CCce-------EEEEcCceeEecCccccc--ccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHH
Q 029908 71 LKLLLVTLG-EHGC-------RYYTKSFKGAVDAFRVKT--VDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFAN 140 (185)
Q Consensus 71 ~~~vvit~G-~~G~-------~~~~~~~~~~~~~~~~~~--~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~ 140 (185)
++.|++|.| ..|+ +++++++.++++.++++. +|++|+||+|+|+|++++++|.+ +.+|+++|+
T Consensus 178 ~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dt~GaGD~f~a~~~~~l~~g~~-------~~~A~~~A~ 250 (289)
T 3pzs_A 178 PKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLVDFGKRQPVGVGDLTSGLLLVNLLKGEP-------LDKALEHVT 250 (289)
T ss_dssp CSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECCCCTTSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHH
T ss_pred CCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeeecCCCCCCCcHHHHHHHHHHHHHHCCCC-------HHHHHHHHH
Confidence 999999985 4776 777777888888888776 89999999999999999999999 999999999
Q ss_pred HHhHHHhhc
Q 029908 141 ACGALSTTK 149 (185)
Q Consensus 141 ~~aa~~~~~ 149 (185)
++++..+++
T Consensus 251 ~~~~~~i~~ 259 (289)
T 3pzs_A 251 AAVYEVMLK 259 (289)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 987777664
No 59
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=99.83 E-value=3e-20 Score=150.00 Aligned_cols=132 Identities=15% Similarity=0.090 Sum_probs=101.7
Q ss_pred CeEEEcCCCCCC--CCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCCHHHH----HHhcCCCCcEEEEEcCCCc
Q 029908 9 ALLSYDPNLRLP--LWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKIDDESA----LSLWHPNLKLLLVTLGEHG 82 (185)
Q Consensus 9 ~~v~~D~~~~~~--~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~~~~~----~~l~~~g~~~vvit~G~~G 82 (185)
.++++||+++.. +|. .+...+.+.++++++|+|+||..|++.|+|.+..+.+++ ++|.+.|++.|+||.|..|
T Consensus 112 ~~vv~DPVm~d~G~~~~-~~~~~~~~~~Ll~~adiitPN~~Ea~~L~g~~~~~~~~~~~aa~~L~~~G~~~Vvvt~g~~g 190 (300)
T 3zs7_A 112 LTFICDPVMGDDGIMYC-KKEVLDAYRELVPLADIVTPNYFEASLLSGVTVNDLSSAILAADWFHNCGVAHVIIKSFREQ 190 (300)
T ss_dssp CEEEECCCC----------CTHHHHHHHHGGGCSEECCCHHHHHHHHSSCCCSHHHHHHHHHHHHHHTCSEEEEEEEC--
T ss_pred ceEEEccccccCCCeec-CHHHHHHHHHHhhhCCEecCCHHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCEEEEecCcCC
Confidence 799999988764 665 455667777899999999999999999999876554433 3666789999999999887
Q ss_pred ----e--EEEE-c------CceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhc
Q 029908 83 ----C--RYYT-K------SFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTK 149 (185)
Q Consensus 83 ----~--~~~~-~------~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~ 149 (185)
. .++. . ++.++++.++++. +++|+||+|+|+|+++| +|.+ +.+|+++|+++....+.+
T Consensus 191 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~-~~~GtGD~fsaal~a~l-~g~~-------~~~Av~~A~~~v~~~i~~ 261 (300)
T 3zs7_A 191 ENPTHLRFLYSVKEGSEAAVRRFSGVVPYHEG-RYTGTGDVFAACLLAFS-HSHP-------MDVAIGKSMAVLQELIIA 261 (300)
T ss_dssp -CCSEEEEEEEECCSTTSCCEEEEEEEECCSS-CBTTHHHHHHHHHHHHH-TTSC-------HHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEeccccccCCCeEEEEEeccCCC-CCcCHHHHHHHHHHHHH-cCCC-------HHHHHHHHHHHHHHHHHH
Confidence 1 3333 4 4567788887776 89999999999999999 9999 999999999997777665
Q ss_pred c
Q 029908 150 K 150 (185)
Q Consensus 150 ~ 150 (185)
.
T Consensus 262 t 262 (300)
T 3zs7_A 262 T 262 (300)
T ss_dssp T
T ss_pred H
Confidence 3
No 60
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=99.69 E-value=1.4e-16 Score=138.07 Aligned_cols=135 Identities=18% Similarity=0.068 Sum_probs=99.2
Q ss_pred HHcCCeEEEcCCCCC----CCCCChHHHHHHHH-HhhccccEEEcCHHHHhHhhCCC--CCCHHH----HHHhcCCCC-c
Q 029908 5 KEAGALLSYDPNLRL----PLWPSPEEAREQIM-SIWDKAEVIKVSDVELEFLTGSD--KIDDES----ALSLWHPNL-K 72 (185)
Q Consensus 5 ~~~g~~v~~D~~~~~----~~~~~~~~~~~~~~-~~l~~~dii~~n~~E~~~l~~~~--~~~~~~----~~~l~~~g~-~ 72 (185)
++.+.+|++||+.+. .++. +...+.+. ++++.+|+|+||..|++.|+|.. ..+.++ ++++.+.|. +
T Consensus 116 ~~~~~~vVlDPvm~a~~g~~l~~--~~~~~~l~~~Ll~~a~iitPN~~Ea~~L~g~~~~i~~~~d~~~aa~~L~~~g~~~ 193 (550)
T 3rm5_A 116 GENRPKLVVDPVLVATSGSSLAG--KDIVSLITEKVAPFADILTPNIPECYKLLGEERKVNGLQDIFQIAKDLAKITKCS 193 (550)
T ss_dssp GGGSCEEEECCCC---------C--TTHHHHHHHHTGGGCSEECCBHHHHHHHHSCCCCCCSSHHHHHHHHHHHHHHCCS
T ss_pred cccCCCEEEecceecCCCCcCCC--HHHHHHHHHHhhCcceEEecCHHHHHHHhCCCCCCCCHHHHHHHHHHHHHhCCCC
Confidence 345899999998763 2332 33444444 79999999999999999999974 222222 235666666 8
Q ss_pred EEEEEcCCCc--------e--EEEE--cCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHH
Q 029908 73 LLLVTLGEHG--------C--RYYT--KSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFAN 140 (185)
Q Consensus 73 ~vvit~G~~G--------~--~~~~--~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~ 140 (185)
.||||.|..+ + +++. +++.++++.++++.++++|+||+|+|++++.|++|.+ +.+|++.|+
T Consensus 194 ~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~~~~~v~~~~t~GtGD~fsaaiaa~La~G~~-------l~eAv~~A~ 266 (550)
T 3rm5_A 194 NILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGNFVNTTHTHGTGCTLASAIASNLARGYS-------LPQSVYGGI 266 (550)
T ss_dssp CEEEEECC-------CCEEEEEEEETTTTEEEEEEEECCCCSCCBTHHHHHHHHHHHHHHTTCC-------HHHHHHHHH
T ss_pred EEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEEEecCcCCCCCcChhHHHHHHHHHHHHcCCC-------HHHHHHHHH
Confidence 9999998753 3 4553 4567778888888899999999999999999999999 999999999
Q ss_pred HHhHHHhh
Q 029908 141 ACGALSTT 148 (185)
Q Consensus 141 ~~aa~~~~ 148 (185)
......++
T Consensus 267 ~~v~~ai~ 274 (550)
T 3rm5_A 267 EYVQNAVA 274 (550)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 75554443
No 61
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=99.64 E-value=2e-15 Score=120.19 Aligned_cols=127 Identities=16% Similarity=0.035 Sum_probs=89.7
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhc--cccEEEcCHHHHhHhhCCC-C--------CCHHHH----HHh
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWD--KAEVIKVSDVELEFLTGSD-K--------IDDESA----LSL 66 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~--~~dii~~n~~E~~~l~~~~-~--------~~~~~~----~~l 66 (185)
+.++++|+|+++||..... .....+.+.++++ ++++|+||..|++.|+|.. . .+.++. +++
T Consensus 82 ~~a~~~~~pvVlDp~g~~~----~~~~~~~~~~ll~~~~~~vitPN~~E~~~L~g~~~~~~~gvd~~~~~~~~~~aa~~l 157 (272)
T 1ekq_A 82 KSANEHGVPVILDPVGAGA----TPFRTESARDIIREVRLAAIRGNAAEIAHTVGVTDWLIKGVDAGEGGGDIIRLAQQA 157 (272)
T ss_dssp HHHHHTTCCEEEECTTBTT----BHHHHHHHHHHHHHSCCSEEEECHHHHHHHCC---------------HHHHHHHHHH
T ss_pred HHHHhcCCeEEEeCCCcCc----ccchHHHHHHHHccCCCeEECCCHHHHHHHhCCCcccccCccCCCCHHHHHHHHHHH
Confidence 4567889999999975321 1222334456776 8999999999999999865 3 122222 244
Q ss_pred cCCCCcEEEEEcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHH
Q 029908 67 WHPNLKLLLVTLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANA 141 (185)
Q Consensus 67 ~~~g~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~ 141 (185)
.+.+...|++| |..+ ++.++++.++++.+...+.+++|+||+|.|++++.+.+|.+ +.+|+++|+.
T Consensus 158 ~~~~~~vVv~~-G~~~-~i~~~~~~~~~~~~~~~~~~ttGaGD~lag~iaa~la~g~~-------~~~A~~~A~~ 223 (272)
T 1ekq_A 158 AQKLNTVIAIT-GEVD-VIADTSHVYTLHNGHKLLTKVTGAGCLLTSVVGAFCAVEEN-------PLFAAIAAIS 223 (272)
T ss_dssp HHHHTSEEEEC-SSSE-EEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHHHTTCSS-------HHHHHHHHHH
T ss_pred HHHcCCEEEEE-CCCC-EEEeCCEEEEEcCCCccccCccCchHHHHHHHHHHHhcCCC-------HHHHHHHHHH
Confidence 44433445555 8776 56666677888887777789999999999888888888998 9999999985
No 62
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=99.27 E-value=1.2e-11 Score=97.93 Aligned_cols=125 Identities=17% Similarity=0.037 Sum_probs=83.2
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhc-cccEEEcCHHHHhHhhCCCC---------CCHHH----HHHhc
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWD-KAEVIKVSDVELEFLTGSDK---------IDDES----ALSLW 67 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~-~~dii~~n~~E~~~l~~~~~---------~~~~~----~~~l~ 67 (185)
+.+++.++|+++||..... .....+...++++ .+++|+||..|++.|+|... ...++ ++++.
T Consensus 80 ~~a~~~~~pvVlDpv~~~~----~~~~~~~~~~ll~~~~~vITPN~~E~~~L~g~~~~~~gvd~~~~~~~~~~~aa~~la 155 (265)
T 1v8a_A 80 EIANELGKPIVLDPVGAGA----TKFRTRVSLEILSRGVDVLKGNFGEISALLGEEGKTRGVDSLEYGEEEAKKLTMNAA 155 (265)
T ss_dssp HHHHHHTCCEEEECTTBTT----BHHHHHHHHHHHHHCCSEEEEEHHHHHHHHHHHC----------CHHHHHHHHHHHH
T ss_pred HHHHHcCCcEEEcCccccc----cccCHHHHHHHHHhCCcEEcCCHHHHHHHhCCcccccCcCcccccHHHHHHHHHHHH
Confidence 3567789999999975321 1122233344444 39999999999999987542 01122 22444
Q ss_pred CCCCcEEEEEcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHH
Q 029908 68 HPNLKLLLVTLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFAN 140 (185)
Q Consensus 68 ~~g~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~ 140 (185)
+.+...|++| |..+ ++++++..+.++.......+++|+||+|+|.+++.+++|.+ .+|+..|.
T Consensus 156 ~~~~~~Vvlk-G~~d-~i~~~~~~~~~~~g~~~~~~~~GtGD~Lsg~iaa~lA~g~~--------~~Aa~~a~ 218 (265)
T 1v8a_A 156 REFNTTVAVT-GAVD-YVSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAFVAVTEP--------LKATTSAL 218 (265)
T ss_dssp HHTTSEEEEE-SSSE-EEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHHHTTSCH--------HHHHHHHH
T ss_pred HHhCcEEEEc-CCCc-EEEcCCEEEEEcCCCcCcCCccChhHHHHHHHHHHHhcCCC--------HHHHHHHH
Confidence 4444466776 6555 45666777788776656669999999999999999999864 45555554
No 63
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=99.13 E-value=1.4e-09 Score=86.27 Aligned_cols=128 Identities=13% Similarity=-0.051 Sum_probs=87.8
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhh-ccccEEEcCHHHHhHhhCCCCC----C-------HH---H----
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIW-DKAEVIKVSDVELEFLTGSDKI----D-------DE---S---- 62 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l-~~~dii~~n~~E~~~l~~~~~~----~-------~~---~---- 62 (185)
+.+++.++|+++||..... + ....+...+++ ..+++|+||..|+..|.|.... + .+ +
T Consensus 82 ~~a~~~~~PvVlDPVg~ga---s-~~r~~~~~~Ll~~~~~VItpN~~E~~~L~g~~~~~~GVds~~~~~~~~~~~d~~~a 157 (273)
T 3dzv_A 82 DYARQVNKLTVVDLVGYGA---S-DIRNEVGEKLVHNQPTVVKGNLSEMRTFCQLVSHGRGVDGSPLDQSEEAIEELIQA 157 (273)
T ss_dssp HHHHHTTCCEEEECTTTTS---C-HHHHHHHHHHHHTCCSEEEEEHHHHHHHTTCCCC-------CGGGSHHHHHHHHHH
T ss_pred HHHHHcCCcEEEchhhcCC---c-ccCHHHHHHHHhcCCcEECCCHHHHHHHhCCcccccccccccccchhhhhHHHHHH
Confidence 4577889999999975432 1 12222333332 3789999999999999986531 1 01 1
Q ss_pred HHHhcCCCC-cEEEEEcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHH
Q 029908 63 ALSLWHPNL-KLLLVTLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANA 141 (185)
Q Consensus 63 ~~~l~~~g~-~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~ 141 (185)
++++.+... ..|++|.+ ..++++++..+.++........++|+||++.|.+++.+.+|.+ +.+|+..|..
T Consensus 158 a~~la~~~~~~~VvlkG~--~D~i~dg~~~~~~~~G~~~~~~v~GtGc~Ls~~Iaa~lA~g~~-------~~~Aa~~A~~ 228 (273)
T 3dzv_A 158 LRQQTQKFPQTVFLATGI--QDVLVSQEQVIVLQNGVPELDCFTGTGDLVGALVAALLGEGNA-------PMTAAVAAVS 228 (273)
T ss_dssp HHHHHHHSTTCEEEEESS--SEEEECSSCEEEECCCCGGGGSSTTHHHHHHHHHHHHHHHTCC-------HHHHHHHHHH
T ss_pred HHHHHHHhCCeEEEEECC--eeEEEcCCEEEEeCCCCcccCCcCCchHHHHHHHHHHHhCCCC-------HHHHHHHHHH
Confidence 224444333 57777764 3466666677777665555556799999999999999999998 8999888875
Q ss_pred H
Q 029908 142 C 142 (185)
Q Consensus 142 ~ 142 (185)
.
T Consensus 229 ~ 229 (273)
T 3dzv_A 229 Y 229 (273)
T ss_dssp H
T ss_pred H
Confidence 4
No 64
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=99.10 E-value=3.9e-10 Score=91.17 Aligned_cols=138 Identities=17% Similarity=0.140 Sum_probs=86.8
Q ss_pred cCCeEEEcCCCCCCCCCChHHHHHHHHHh-h-ccccEEEcCHHHHhHhhCCCCCCH-HHH-----HHhcCCCCcEEEEEc
Q 029908 7 AGALLSYDPNLRLPLWPSPEEAREQIMSI-W-DKAEVIKVSDVELEFLTGSDKIDD-ESA-----LSLWHPNLKLLLVTL 78 (185)
Q Consensus 7 ~g~~v~~D~~~~~~~~~~~~~~~~~~~~~-l-~~~dii~~n~~E~~~l~~~~~~~~-~~~-----~~l~~~g~~~vvit~ 78 (185)
.++|+++||.. ..+...-.++ + +.+++|+||..|++.|++....+. ++. +++.+ + .+|+..
T Consensus 154 ~~~pvVlDa~g--------~~ll~~~~~l~L~~~~~viTPN~~E~~~L~g~~~~~~~~d~~~~aa~~l~~-g--~~Vvlk 222 (311)
T 3bgk_A 154 PKQTLIIDGSA--------INLLAKRKPAIWPTKQIILTPHQKEWERLSGLTIPEQIEAATQTALAHFPK-E--TILVAK 222 (311)
T ss_dssp TTSEEEEETHH--------HHHHHHCC-CCCSCSCEEEECCSCC-CTTTCCCSTTCCHHHHHHHHTTSCT-T--CEEEEC
T ss_pred CCCeEEEeCCh--------hhhhccChhhcCCCCCEEECCcHHHHHHHhCCCCCcchhhHHHHHHHHHhc-C--CEEEEe
Confidence 38899999951 2221110112 3 478999999999999998765432 222 24444 3 455555
Q ss_pred CCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHc-cCCCCCChHHHHHHHHHHHHHhHHHhh---ccCCCC
Q 029908 79 GEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVD-DQSAIEDEPRLREILKFANACGALSTT---KKGAIP 154 (185)
Q Consensus 79 G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~-g~~~~~~~~~~~~a~~~a~~~aa~~~~---~~g~~~ 154 (185)
| .+.++++ ++.+++..+..+..+++|+||+|.+.+++.+++ |.+ +.+++++|+.+....-+ ..| .
T Consensus 223 G-~~~~i~~-~~~~~~~~~~~~~~~t~GtGD~Lag~iaa~lA~~g~~-------~~eA~~~A~~~~~~ag~~a~~~g--~ 291 (311)
T 3bgk_A 223 S-HQTKIYQ-GQKIGHIQVGGPYQATGGMGDTLAGMIAGFVAQFHTD-------RFEVAAAAVFLHSYIADQLSKEA--Y 291 (311)
T ss_dssp S-SSCEEEE-TTEEEEECCCCGGGCSTTHHHHHHHHHHHHHHHCCSC-------HHHHHHHHHHHHHHHHHHHHTTC--S
T ss_pred C-CCeEEEE-CCEEEEECCCCCCCCCCcHHHHHHHHHHHHHHccCCC-------HHHHHHHHHHHHHHHHHHHHhhC--C
Confidence 5 5677777 444455566677789999999985555555568 999 99999999766555322 224 2
Q ss_pred CCCCHHHHHHHHh
Q 029908 155 ALPTESEALALLK 167 (185)
Q Consensus 155 ~~~~~~~i~~~~~ 167 (185)
++ ...+|.+.+.
T Consensus 292 ~~-~a~dl~~~l~ 303 (311)
T 3bgk_A 292 VV-LPTRISAEIT 303 (311)
T ss_dssp SC-CHHHHHHHHH
T ss_pred CC-CHHHHHHHHH
Confidence 33 5666666554
No 65
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=99.07 E-value=8.7e-10 Score=89.08 Aligned_cols=117 Identities=15% Similarity=0.028 Sum_probs=76.9
Q ss_pred cCCeEEEcCCCCCCCCCChHHHHHHHHHhh--ccccEEEcCHHHHhHhhCCCCCCHH-HH-----HHhcCCCCcEEEEEc
Q 029908 7 AGALLSYDPNLRLPLWPSPEEAREQIMSIW--DKAEVIKVSDVELEFLTGSDKIDDE-SA-----LSLWHPNLKLLLVTL 78 (185)
Q Consensus 7 ~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l--~~~dii~~n~~E~~~l~~~~~~~~~-~~-----~~l~~~g~~~vvit~ 78 (185)
.++|+++||+. ..+...-.+++ +.+++|+||..|++.|++....+.+ +. +++ ++ +|+..
T Consensus 140 ~~~pvVlDa~g--------~~ll~~~~~~l~~~~~~viTPN~~E~~~L~g~~~~~~~~~~a~~aA~~l---g~--~VvlK 206 (310)
T 2r3b_A 140 KQQWLIIDGSA--------ITLFSQGNFSLTYPEKVVFTPHQMEWQRLSHLPIEQQTLANNQRQQAKL---GS--TIVLK 206 (310)
T ss_dssp TTCEEEEETHH--------HHHHHHTTCCCSSGGGEEEECCHHHHHHHHCCCGGGCCHHHHHHHHHHH---TS--EEEEC
T ss_pred CCCcEEEcCCc--------chhcccchhhhcCCCCEEEcCCHHHHHHHhCCCCCcccchHHHHHHHHh---Cc--EEEEe
Confidence 48999999952 22211101123 4688999999999999987643221 22 233 43 55555
Q ss_pred CCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHH
Q 029908 79 GEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGAL 145 (185)
Q Consensus 79 G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~ 145 (185)
| .+.++++ ++..++..+..+..+++|+||++.+.+++.+++|.+ +.+++..|+.+.+.
T Consensus 207 G-~~~vi~~-~~~~~~~~~g~~~~~t~GtGD~Lag~Iaa~lA~g~~-------~~eA~~~A~~~~~~ 264 (310)
T 2r3b_A 207 S-HRTTIFH-AGEPFQNTGGNPGMATGGTGDTLAGIIAGFLAQFKP-------TIETIAGAVYLHSL 264 (310)
T ss_dssp S-TTCEEEC-SSSCEECCCCCGGGCSTTHHHHHHHHHHHHHHHSCS-------SHHHHHHHHHHHHH
T ss_pred C-CceEEEE-CCEEEEECCCCCCCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHH
Confidence 5 4677776 433445555667788999999986666555679998 88999888755555
No 66
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=98.85 E-value=1.7e-08 Score=86.44 Aligned_cols=145 Identities=17% Similarity=0.060 Sum_probs=91.7
Q ss_pred HHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCC----CHHHHHHhcCCCCcEEEEEcC
Q 029908 4 AKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKI----DDESALSLWHPNLKLLLVTLG 79 (185)
Q Consensus 4 a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~----~~~~~~~l~~~g~~~vvit~G 79 (185)
+++.++|+++||..-.-+ . .+.+ +..+..++|+||..|++.|++.... +.+.++++.+.+ ..+|+..|
T Consensus 344 l~~~~~pvVlDadgl~~l---~---~~ll-~~~~~~~vlTPN~~E~~~L~g~~~~~~~~d~~aa~~la~~~-~~~VvlKG 415 (502)
T 3rss_A 344 LKTLEKPAVIDADAINVL---D---TSVL-KERKSPAVLTPHPGEMARLVKKTVGDVKYNYELAEEFAKEN-DCVLVLKS 415 (502)
T ss_dssp HHHCCSCEEECHHHHHTC---C---HHHH-HHCSSCEEECCCHHHHHHHHTCCHHHHTTCHHHHHHHHHHH-TSEEEECS
T ss_pred HHhcCCCEEEeCcccchh---c---HHHH-hccCCCEEEeCCHHHHHHHhCCCccchHHHHHHHHHHHHHc-CCEEEEeC
Confidence 456799999999521100 0 1122 2235689999999999999986531 123333444332 23555566
Q ss_pred CCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHH---hhccCCCCCC
Q 029908 80 EHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALS---TTKKGAIPAL 156 (185)
Q Consensus 80 ~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~---~~~~g~~~~~ 156 (185)
. +.++++++..+ +.....+..+++|+||+|++.+.+.+++|.+ +.+++..|+.....+ ... |.. ++
T Consensus 416 ~-~~vi~~~~~~~-~~~~g~~~~at~GsGD~Lag~iaa~lA~g~~-------~~~Aa~~A~~~hg~Ag~~aa~-g~~-~~ 484 (502)
T 3rss_A 416 A-TTIVTDGEKTL-FNITGNTGLSKGGSGDVLTGMIAGFIAQGLS-------PLEASTVSVYLHGFAAELFEQ-DER-GL 484 (502)
T ss_dssp S-SEEEECSSCEE-EECCCCGGGSSTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHTCSS-CGG-GC
T ss_pred C-CeEEEcCCEEE-EECCCCCccccCCchHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHHHHHHhc-CCC-Cc
Confidence 4 56666666444 4334556778999999998888888889999 999999987655554 332 322 33
Q ss_pred CCHHHHHHHHhc
Q 029908 157 PTESEALALLKR 168 (185)
Q Consensus 157 ~~~~~i~~~~~~ 168 (185)
...+|.+.+.+
T Consensus 485 -~a~dl~~~lp~ 495 (502)
T 3rss_A 485 -TASELLRLIPE 495 (502)
T ss_dssp -CHHHHHHHHHH
T ss_pred -CHHHHHHHHHH
Confidence 55666665543
No 67
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=98.85 E-value=1.4e-08 Score=80.82 Aligned_cols=144 Identities=16% Similarity=0.104 Sum_probs=89.8
Q ss_pred HHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCCCCCC----H-HHHHHhcCCCCcEEEEEc
Q 029908 4 AKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGSDKID----D-ESALSLWHPNLKLLLVTL 78 (185)
Q Consensus 4 a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~~~~~----~-~~~~~l~~~g~~~vvit~ 78 (185)
+.+.+.|+++|...-.. +. .......++|+||..|++.|++....+ . +.++++.+.+. .+|+-.
T Consensus 121 ~l~~~~p~VlDAdal~~---------~~-l~~~~~~~vlTPN~~E~~~L~g~~~~~~~~d~~~aa~~la~~~~-~~VvlK 189 (279)
T 3rpz_A 121 VLTADCPVILDAGALAK---------RT-YPKREGPVILTPHPGEFFRMTGVPVNELQKKRAEYAKEWAAQLQ-TVIVLK 189 (279)
T ss_dssp HTTSSSCEEECGGGCCS---------CC-CCCCSSCEEECCCHHHHHHHHCCCHHHHTTSHHHHHHHHHHHHT-SEEEEC
T ss_pred HHhhCCCEEEECCccch---------hh-hhhccCCEEEecCHHHHHHHhCCCccchHHHHHHHHHHHHHHcC-eEEEEe
Confidence 34467899999853210 00 001245789999999999999876322 1 12234433222 244444
Q ss_pred CCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHH----HhHHHhhccCCCC
Q 029908 79 GEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANA----CGALSTTKKGAIP 154 (185)
Q Consensus 79 G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~----~aa~~~~~~g~~~ 154 (185)
|. +.+++++++.+++.....+...++|+||++.+.+...+.+|.+ +.+++..|+. ++-...++.|..
T Consensus 190 G~-~~vi~~~~g~~~~~~~g~~~~at~GtGD~Lag~iaa~lA~g~~-------~~~A~~~a~~lh~~Ag~~a~~~~g~~- 260 (279)
T 3rpz_A 190 GN-QTVIAFPDGDCWLNPTGNGALAKGGTGDTLTGMILGMLCCHED-------PKHAVLNAVYLHGACAELWTDEHSAH- 260 (279)
T ss_dssp ST-TCEEECTTSCEEECCCCCGGGCSTTHHHHHHHHHHHHHHHCSS-------HHHHHHHHHHHHHHHHHHHHHHSCTT-
T ss_pred CC-CcEEECCCceEEEeCCCCCCCCCCChHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHHHHHHHhcCCC-
Confidence 53 5666766655566555566778999999987777777789998 9999998863 344445555543
Q ss_pred CCCCHHHHHHHHhc
Q 029908 155 ALPTESEALALLKR 168 (185)
Q Consensus 155 ~~~~~~~i~~~~~~ 168 (185)
++ ...||.+.+.+
T Consensus 261 ~~-~a~dl~~~lp~ 273 (279)
T 3rpz_A 261 TL-LAHELSDILPR 273 (279)
T ss_dssp SC-CHHHHHHHHHH
T ss_pred Cc-CHHHHHHHHHH
Confidence 33 55666665543
No 68
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=98.58 E-value=7.3e-07 Score=76.96 Aligned_cols=127 Identities=17% Similarity=0.006 Sum_probs=82.1
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhc--cccEEEcCHHHHhHhhCCCC------C-----CHHH----HH
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIWD--KAEVIKVSDVELEFLTGSDK------I-----DDES----AL 64 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~--~~dii~~n~~E~~~l~~~~~------~-----~~~~----~~ 64 (185)
+.+++.++|+++||..... .....+...++++ .+++|+||..|+..|.|... + +.++ ++
T Consensus 328 ~~a~~~~~PvVlDPVg~~a----~~~r~~~~~~Ll~~~~~~vItpN~~E~~~L~g~~~~~~~GVds~~~~~~~d~~~aA~ 403 (540)
T 3nl6_A 328 RAYNDVKRPIVFDPVGYSA----TETRLLLNNKLLTFGQFSCIKGNSSEILGLAELNKERMKGVDASSGISNELLIQATK 403 (540)
T ss_dssp HHHHTTTCCEEEECTTCTT----SHHHHHHHHHHTTSCCCSEEEECHHHHHHHTTC--------------CCHHHHHHHH
T ss_pred HHHHHcCCCEEEChHHhhc----ccccHHHHHHHHhhCCCeEECCCHHHHHHHhCCCcccccccccccccCHHHHHHHHH
Confidence 3567889999999976432 2333455667777 79999999999999998652 0 0122 22
Q ss_pred HhcCCCCcEEEEEcCCCceEEEEc-------------------CceeEecCcc-cccccCCCcchHHHHHHHHHHHccC-
Q 029908 65 SLWHPNLKLLLVTLGEHGCRYYTK-------------------SFKGAVDAFR-VKTVDTTGAGDAFVGALLCKIVDDQ- 123 (185)
Q Consensus 65 ~l~~~g~~~vvit~G~~G~~~~~~-------------------~~~~~~~~~~-~~~~d~~GaGDaf~A~~~~~l~~g~- 123 (185)
++.+.....|++|. . ..++.++ +..+.++... .-....+|.||++.+.+++.+..+.
T Consensus 404 ~lA~~~~~vVvlkG-~-~D~I~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~m~~vtGtGc~Lsg~Iaa~la~~~~ 481 (540)
T 3nl6_A 404 IVAFKYKTVAVCTG-E-FDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPIEIMGDITASGCSLGSTIACMIGGQPS 481 (540)
T ss_dssp HHHHHTTSEEEECS-S-SEEEEECCGGGBCCSSSCCSSCCTTSSCEEEEECSCCGGGGSSTTHHHHHHHHHHHHHHTCCT
T ss_pred HHHHHhCCEEEEcC-C-CeEEECCCccccccccccccccccCCccEEEECCCChhhccCccCchHHHHHHHHHHHhcCcC
Confidence 44333334555554 2 4555665 3455555544 2233469999999999999998886
Q ss_pred --CCCCChHHHHHHHHHHHH
Q 029908 124 --SAIEDEPRLREILKFANA 141 (185)
Q Consensus 124 --~~~~~~~~~~~a~~~a~~ 141 (185)
+ +.+|+..|..
T Consensus 482 ~~~-------~~~Aa~~a~~ 494 (540)
T 3nl6_A 482 EGN-------LFHAVVAGVM 494 (540)
T ss_dssp TCB-------HHHHHHHHHH
T ss_pred CCC-------HHHHHHHHHH
Confidence 5 6777776663
No 69
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=98.56 E-value=4.9e-07 Score=71.26 Aligned_cols=125 Identities=18% Similarity=0.011 Sum_probs=76.2
Q ss_pred hHHHHcCCeEEEcCCCCCCCCCChHHHHHHHHHhh-ccccEEEcCHHHHhHhhCCCCC---------CHHHH----HHhc
Q 029908 2 KAAKEAGALLSYDPNLRLPLWPSPEEAREQIMSIW-DKAEVIKVSDVELEFLTGSDKI---------DDESA----LSLW 67 (185)
Q Consensus 2 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l-~~~dii~~n~~E~~~l~~~~~~---------~~~~~----~~l~ 67 (185)
+.|++.|+|+++||..... .....+...+++ .++++|++|..|...|.|.... ..++. +++.
T Consensus 80 ~~A~~~~~PvVLDPVg~ga----s~~R~~~~~~ll~~~~~vIrgN~sEi~~L~g~~~~~~gvds~~~~~~d~~~~a~~lA 155 (265)
T 3hpd_A 80 EIANELGKPIVLDPVGAGA----TKFRTRVSLEILSRGVDVLKGNFGEISALLGEEGKTRGVDSLEYGEEEAKKLTMNAA 155 (265)
T ss_dssp HHHHHHTCCEEEECTTBTT----BHHHHHHHHHHHHHCCSEEEEEHHHHHHHHHHHC----------CHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEcCCCCCC----cHHHHHHHHHHHhcCCcEEcCCHHHHHHHhcccCCCCCccCccccHHHHHHHHHHHH
Confidence 4678899999999975321 222333344433 3689999999999999864311 11222 2332
Q ss_pred CCCCcEEEEEcCCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHH
Q 029908 68 HPNLKLLLVTLGEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFAN 140 (185)
Q Consensus 68 ~~g~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~ 140 (185)
+..-..|++| | ...++.+++..+.++.-....-..+|.||++.+.+.+.+.++ + +.+++..|+
T Consensus 156 ~~~~~vVvlk-G-~~d~I~dg~~~~~~~~G~~~m~~vtGtGc~Lsg~iaa~lA~~-~-------~~~Aa~~a~ 218 (265)
T 3hpd_A 156 REFNTTVAVT-G-AVDYVSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAFVAVT-E-------PLKATTSAL 218 (265)
T ss_dssp HHTTSEEEEE-S-SSEEEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHHHTTS-C-------HHHHHHHHH
T ss_pred HHhCCEEEEe-C-CCeEEEcCCEEEEECCCChHhhcCCccchHHHHHHHHHHhcC-C-------hHHHHHHHH
Confidence 2222245554 4 356667777666665544444445899999887777776676 4 456666555
No 70
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=97.68 E-value=0.00056 Score=58.08 Aligned_cols=141 Identities=16% Similarity=0.126 Sum_probs=83.4
Q ss_pred eEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCC-----CCCCH-----HHHHHhcCCC-CcEEEEEc
Q 029908 10 LLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGS-----DKIDD-----ESALSLWHPN-LKLLLVTL 78 (185)
Q Consensus 10 ~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~-----~~~~~-----~~~~~l~~~g-~~~vvit~ 78 (185)
|+++|...- +. ..+.+.++...+|+||..|++.|++. +..+. +.++++.+.. ...|+++.
T Consensus 317 p~VlDADaL---~~------~~~~~~~~~~~VlTPh~~E~~rL~g~~~~~v~~~~~~~d~~~aa~~la~~~g~~~VvlKG 387 (475)
T 3k5w_A 317 PCVLDAGVF---YH------KEILQALEKEAVLTPHPKEFLSLLNLVGINISMLELLDNKLEIARDFSQKYPKVVLLLKG 387 (475)
T ss_dssp CEEEEGGGG---GS------GGGGTTTTSSEEEECCHHHHHHHHHHTSCCCCTTSGGGSCC--CHHHHHHCTTEEEEECS
T ss_pred CEEEECccc---CC------chhhhccCCCEEECCCHHHHHHHhCCccCCCCcchhHHHHHHHHHHHHHHcCCeEEEEeC
Confidence 889987421 00 01123445668999999999999875 32221 1122343333 33455554
Q ss_pred CCCceEEEEcCceeEecCcccccccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHHHhHHHhhc-cCCCCCCC
Q 029908 79 GEHGCRYYTKSFKGAVDAFRVKTVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFANACGALSTTK-KGAIPALP 157 (185)
Q Consensus 79 G~~G~~~~~~~~~~~~~~~~~~~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~-~g~~~~~~ 157 (185)
+ ..++.+++..+..+ ....-..+.|+||++++.+.+.+++|.+ +.+++..|...-..+-+. .+. .++
T Consensus 388 ~--~~vI~~~~~~~~~~-~g~~~mat~GtGdvLsg~Iaa~lA~g~~-------~~~Aa~~a~~lhg~ag~~a~~~-~~~- 455 (475)
T 3k5w_A 388 A--NTLIAHQGQVFINI-LGSVALAKAGSGDVLAGLILSLLSQNYT-------PLDAAINASLAHALASLEFKNN-YAL- 455 (475)
T ss_dssp S--SEEEEETTEEEEEC-CCCGGGCSTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHGGGGCSST-TCC-
T ss_pred C--CCEEECCCEEEEEC-CCCCCCCCCCHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHHHhccC-CCc-
Confidence 3 34455544444333 3344556899999999999999999998 888888776443333222 121 244
Q ss_pred CHHHHHHHHhcCcc
Q 029908 158 TESEALALLKRSTI 171 (185)
Q Consensus 158 ~~~~i~~~~~~~~~ 171 (185)
...+|.+.+.+.+.
T Consensus 456 ~a~dl~~~l~~~~~ 469 (475)
T 3k5w_A 456 TPLDLIEKIKQLEG 469 (475)
T ss_dssp CHHHHHHHHHTCC-
T ss_pred CHHHHHHHhhhhhc
Confidence 66788777766543
No 71
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=96.10 E-value=0.027 Score=47.67 Aligned_cols=47 Identities=11% Similarity=0.131 Sum_probs=38.7
Q ss_pred HHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhCC
Q 029908 5 KEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTGS 55 (185)
Q Consensus 5 ~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~~ 55 (185)
++.+++|-|....- .+.+-....+..++|++|.+=+|++|+..+.+.
T Consensus 273 ~~~~~~iH~E~As~----~~~~l~~~i~~~i~p~vDSlGmNEqELa~l~~~ 319 (474)
T 3drw_A 273 KEKDVKIHVEFASV----QDRKLRKKIITNILPFVDSVGIDEAEIAQILSV 319 (474)
T ss_dssp HHTTCEEEEECCCC----SCHHHHHHHHHHTGGGSSEEEEEHHHHHHHHHH
T ss_pred cCCCCeEEEEeCcc----ccHHHHHHHHHHhcccccccccCHHHHHHHHHH
Confidence 46799999998753 346677777889999999999999999988764
No 72
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=76.00 E-value=1.9 Score=36.25 Aligned_cols=43 Identities=14% Similarity=0.199 Sum_probs=34.8
Q ss_pred HHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHh
Q 029908 5 KEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFL 52 (185)
Q Consensus 5 ~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l 52 (185)
.+.+++|-|...+- .+.+-....+ .++|++|-+=+|++|+..+
T Consensus 260 ~~~~~~iH~E~As~----~~~~l~~~i~-~ilp~vDSlGmNEqELa~l 302 (457)
T 1l2l_A 260 NDLGIRAHLEFAFT----PDEVVRLEIV-KLLKHFYSVGLNEVELASV 302 (457)
T ss_dssp HHTTCEEEEECCCC----SSHHHHHHHH-HHGGGCSEEEECHHHHHHH
T ss_pred cCCCCeEEEEECCc----ccHHHHHHHH-hhccccccCccCHHHHHHH
Confidence 45788999988753 3456667777 9999999999999999874
No 73
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=73.75 E-value=2.7 Score=35.33 Aligned_cols=45 Identities=13% Similarity=0.195 Sum_probs=35.5
Q ss_pred HHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhhC
Q 029908 5 KEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLTG 54 (185)
Q Consensus 5 ~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~~ 54 (185)
.+.+++|-|++... .+.+.....+ .++|++|.+-+|++|+..+.+
T Consensus 257 ~~~~~~iH~ElAs~----~~~~~~~~i~-~ilp~vDSlGmNE~EL~~l~~ 301 (455)
T 1ua4_A 257 NEREIPVHLEFAFT----PDEKVREEIL-NVLGMFYSVGLNEVELASIME 301 (455)
T ss_dssp HHTTCCEEEECCCC----CCHHHHHHHH-HHGGGCSEEEECHHHHHHHHH
T ss_pred cCCCceEEEEeCCc----cCHHHHHHHH-hhhccCcccccCHHHHHHHHH
Confidence 45788999999753 3345556777 999999999999999987754
No 74
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=73.21 E-value=2.8 Score=35.31 Aligned_cols=44 Identities=9% Similarity=0.138 Sum_probs=35.0
Q ss_pred HHcCCeEEEcCCCCCCCCCChHHHHHHHHHhhccccEEEcCHHHHhHhh
Q 029908 5 KEAGALLSYDPNLRLPLWPSPEEAREQIMSIWDKAEVIKVSDVELEFLT 53 (185)
Q Consensus 5 ~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~ 53 (185)
.+.+++|-|...+- .+.+-....+ .++|++|-+=+|++|+..+.
T Consensus 270 ~~~~~~iH~E~As~----~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~ 313 (467)
T 1gc5_A 270 NRYNVKSHFEFAYT----ANRRVREALV-ELLPKFTSVGLNEVELASIM 313 (467)
T ss_dssp HHTTCEEEEECCCC----CCHHHHHHHH-HHGGGCSEEEECHHHHHHHH
T ss_pred cCCCCeEEEEECCc----ccHHHHHHHH-hhccccccCccCHHHHHHHH
Confidence 45789999998753 3456667777 99999999999999998443
No 75
>1ztd_A Hypothetical protein PFU-631545-001; structural genomics, southeast collaboratory for structural genomics, secsg; 2.00A {Pyrococcus furiosus} SCOP: a.149.1.2
Probab=58.66 E-value=10 Score=25.37 Aligned_cols=33 Identities=18% Similarity=0.121 Sum_probs=27.2
Q ss_pred cccCCCcchHHHHHHHHHHHccCCCCCChHHHHHHHHHH
Q 029908 101 TVDTTGAGDAFVGALLCKIVDDQSAIEDEPRLREILKFA 139 (185)
Q Consensus 101 ~~d~~GaGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a 139 (185)
-.|.+|-||..-|-++++|++|.- +.++++..=
T Consensus 63 R~DKh~kGd~aEA~iAyAWleG~i------s~eEaveil 95 (133)
T 1ztd_A 63 RVDKHAKGDYAEALIAKAWLMGLI------SEREAVEII 95 (133)
T ss_dssp GGGTTCHHHHHHHHHHHHHHTTSS------CHHHHHHHH
T ss_pred cccccCccHHHHHHHHHHHHhccc------cHHHHHHHH
Confidence 457899999999999999999975 277877654
No 76
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=58.43 E-value=21 Score=29.83 Aligned_cols=17 Identities=29% Similarity=0.403 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHhHHHhh
Q 029908 132 LREILKFANACGALSTT 148 (185)
Q Consensus 132 ~~~a~~~a~~~aa~~~~ 148 (185)
+.+|+.+|+.+|+.+..
T Consensus 358 ~~~aL~~~~~~AaakA~ 374 (455)
T 1ua4_A 358 VRDALLFAALAAAAKAM 374 (455)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44444444444444433
No 77
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=51.12 E-value=35 Score=28.54 Aligned_cols=21 Identities=29% Similarity=0.480 Sum_probs=11.2
Q ss_pred ccccCCCcchHH-HHHHHHHHH
Q 029908 100 KTVDTTGAGDAF-VGALLCKIV 120 (185)
Q Consensus 100 ~~~d~~GaGDaf-~A~~~~~l~ 120 (185)
+++.|+|.||++ ++||++++.
T Consensus 434 ~P~~TVGLGDtISa~gfv~~l~ 455 (457)
T 1l2l_A 434 KPKSTVGIGDTISSSAFVSEFS 455 (457)
T ss_dssp ------CTTHHHHHHHHHHHHH
T ss_pred CCCceecCCcchhhHHHHHHHh
Confidence 577888888888 557777764
No 78
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=50.55 E-value=38 Score=28.44 Aligned_cols=21 Identities=24% Similarity=0.395 Sum_probs=16.7
Q ss_pred ccccCCCcchHH-HHHHHHHHH
Q 029908 100 KTVDTTGAGDAF-VGALLCKIV 120 (185)
Q Consensus 100 ~~~d~~GaGDaf-~A~~~~~l~ 120 (185)
+++.|+|.||++ ++||++++.
T Consensus 442 ~P~~TVGLGDtISa~gfv~~l~ 463 (467)
T 1gc5_A 442 SPKSTVGIGDTISSSAFVSEFG 463 (467)
T ss_dssp SCSCCSSHHHHHHHHHHHHHHH
T ss_pred CCCceecCCcchhhHHHHHHHH
Confidence 577889999999 568888765
No 79
>3cra_A Protein MAZG; tandem-repeat domain, hydrolase; 2.10A {Escherichia coli} PDB: 3crc_A*
Probab=36.04 E-value=48 Score=25.60 Aligned_cols=58 Identities=10% Similarity=-0.044 Sum_probs=37.9
Q ss_pred cchHHHHHHHHHHHccCCCCCChHHHHHHHHHHHH-----Hh--HHHhhccCCCCCCCCHHHHHHHHhcCcc
Q 029908 107 AGDAFVGALLCKIVDDQSAIEDEPRLREILKFANA-----CG--ALSTTKKGAIPALPTESEALALLKRSTI 171 (185)
Q Consensus 107 aGDaf~A~~~~~l~~g~~~~~~~~~~~~a~~~a~~-----~a--a~~~~~~g~~~~~~~~~~i~~~~~~~~~ 171 (185)
-||.+.+.+..+...|-+ ++.|++.++. +. =..+...|....-.+.++++.++++.+-
T Consensus 196 lGDlLFalVnlAR~~gID-------pE~ALr~an~KF~~Rf~~~E~~~~~~g~~l~~~sl~e~d~lW~~aK~ 260 (265)
T 3cra_A 196 MGDLLFATVNLARHLGTK-------AEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKR 260 (265)
T ss_dssp HHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC----CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCHHHHHHHHHHHHH
Confidence 489999999888888999 9999998873 21 2223444544333477888888876653
No 80
>2yxh_A MAZG-related protein; TM0360, LEFT-handed superhelix fold, structural genomics; 2.00A {Thermotoga maritima}
Probab=24.26 E-value=1.6e+02 Score=19.37 Aligned_cols=56 Identities=18% Similarity=0.047 Sum_probs=36.2
Q ss_pred cchHHHHHHHHHHHc----cCCCCCChHHHHHHHHHHHHHhHHHhhccCCCCCCCCHHHHHHHHhcCc
Q 029908 107 AGDAFVGALLCKIVD----DQSAIEDEPRLREILKFANACGALSTTKKGAIPALPTESEALALLKRST 170 (185)
Q Consensus 107 aGDaf~A~~~~~l~~----g~~~~~~~~~~~~a~~~a~~~aa~~~~~~g~~~~~~~~~~i~~~~~~~~ 170 (185)
-||.+...+..+-.. +-+ +.++++.++.=-.....+.-....+ +.+++.+.+++.+
T Consensus 54 lGDlLf~vv~la~~~~~~~~~d-------~e~al~~~~~K~~rR~~~v~~~~~~-~~~e~~~~W~~~K 113 (116)
T 2yxh_A 54 IGDMIYDALLVAAVAQRDYGID-------LESAIQKVVEKISHRKPWLFWEEKI-SLEEAEKIWKERK 113 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCC-------HHHHHHHHHHHHHHHCGGGGCSSCC-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHcCCCC-------HHHHHHHHHHHHHHHhHHHhCCCCC-CHHHHHHHHHHHH
Confidence 599999988888765 788 9999887764322222211111123 7888888887654
No 81
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.52 E-value=62 Score=19.67 Aligned_cols=26 Identities=19% Similarity=0.388 Sum_probs=20.9
Q ss_pred CCCCHHHHHHHHhcCcchhhhhhhhhhhh
Q 029908 155 ALPTESEALALLKRSTIIDKIMSWIFFWF 183 (185)
Q Consensus 155 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 183 (185)
.-|+.+++.++.......++ -+--||
T Consensus 28 ~~Ps~eei~~LA~~lgL~~~---VVrVWF 53 (71)
T 2da7_A 28 MEPNSDELLKISIAVGLPQE---FVKEWF 53 (71)
T ss_dssp SSCCHHHHHHHHHHHTCCHH---HHHHHH
T ss_pred CCCCHHHHHHHHHHhCCCHH---HHHHHH
Confidence 34899999999998888777 666777
No 82
>2khf_A PLNJ; anti-microbial, bacteriocin, peptide, two-peptide, antimicrobial protein; NMR {Lactobacillus plantarum} PDB: 2khg_A
Probab=20.47 E-value=29 Score=16.16 Aligned_cols=6 Identities=50% Similarity=1.520 Sum_probs=4.7
Q ss_pred hhhhhh
Q 029908 178 WIFFWF 183 (185)
Q Consensus 178 ~~~~~~ 183 (185)
|-|||-
T Consensus 3 wknfws 8 (26)
T 2khf_A 3 WKNFWS 8 (26)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 778884
Done!